Psyllid ID: psy17946

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKGNILVT
Secondary Structure (PSIPRED)
ccEEEEcccccEEEEEEEEcccccccccccEEEEEEEEcccccHHHHHHHHccccccccHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEcccccccccccEEEEEccccccccccccccccccccEEEHHHHHHHcHHHEEEcccEEEEEEEEEEEEEEEccEEcccEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEccccccEEEEEcccccccccHcHHHHHcccccHHHHHHHHHHHHHcccccHcHHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcccEEEEccccccccccEEEEEccHHHHHHccccccccHHHHHHHHHHHHHHHcccEEEcccEEEEEEEEEEEEEEEcccccccEEEc
Coil and Loop (DISEMBL)
mailyrkgrlhhfqlftmvpqhwcsfessIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLqnagartvvdnelIGRWYWHRLIARLARLLGTKRRykvvvdnplrfqdynivprtqplpnlpegphhvlsanyyvnrdgshevkppatLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLelngkrkgnilvt
Flexible Loop (DISEMBL)
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKtkrgisktkieridtlqnagartvvdneligrwYWHRLIARLARLLGTKRRYKVVvdnplrfqdyniVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEvlnlelngkrkgnilvt
Low Complexity Region (SEG)
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKGNILVT
Disordered region (IsUnstruct)
**ILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNG*********
Disordered Region (DISOPRED)
**ILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDY*****T****NLPEGPHHVLSANYYVNRDGSHEVKPPAT************************LLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKGNILV*
Disordered Region (DISEMBL)
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKGNILVT
Disordered Region (DISPRO)
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKG*ILV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAILYRKGRLHHFQLFTMVPQHWCSFESSIEYFGLVQCEEKQNWFFDLLKTKRGISKTKIERIDTLQNAGARTVVDNELIGRWYWHRLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESHTHINIIQNMLLICLEQAHESHVMTRVGREVKISVVTEVLNLELNGKRKGNILVT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q9Z1P6	113	NADH dehydrogenase [ubiqu	yes	N/A	0.224	0.442	0.519	5e-07
Q05752	113	NADH dehydrogenase [ubiqu	yes	N/A	0.188	0.371	0.568	3e-06
Q0MQA6	113	NADH dehydrogenase [ubiqu	N/A	N/A	0.224	0.442	0.5	4e-06
Q0MQA7	113	NADH dehydrogenase [ubiqu	N/A	N/A	0.224	0.442	0.5	5e-06
Q0MQA8	113	NADH dehydrogenase [ubiqu	yes	N/A	0.224	0.442	0.5	5e-06
O95182	113	NADH dehydrogenase [ubiqu	yes	N/A	0.224	0.442	0.5	5e-06

>sp|Q9Z1P6|NDUA7_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus GN=Ndufa7 PE=1 SV=3

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  EV PP+ +  +  A
Sbjct: 26  LRYQE--IAKRTQPPPKLPVGPSHKLSNNYYCTRDGRREVVPPSIIMSSQKA 75

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
Mus musculus (taxid: 10090)

>sp|Q05752|NDUA7_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Bos taurus GN=NDUFA7 PE=1 SV=2

 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPA 153
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+
Sbjct: 26  LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRREAMPPS 67

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Bos taurus (taxid: 9913)

>sp|Q0MQA6|NDUA7_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Pongo pygmaeus GN=NDUFA7 PE=3 SV=3

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+ +  +  A
Sbjct: 26  LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKA 75

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pongo pygmaeus (taxid: 9600)

>sp|Q0MQA7|NDUA7_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFA7 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+ +  +  A
Sbjct: 26  LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKA 75

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Gorilla gorilla gorilla (taxid: 9595)

>sp|Q0MQA8|NDUA7_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Pan troglodytes GN=NDUFA7 PE=3 SV=3

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+ +  +  A
Sbjct: 26  LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKA 75

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pan troglodytes (taxid: 9598)

>sp|O95182|NDUA7_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Homo sapiens GN=NDUFA7 PE=1 SV=3

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
           LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+ +  +  A
Sbjct: 26  LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKA 75

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
195397563	103	GJ17063 [Drosophila virilis] gi|19414716	0.201	0.436	0.630	2e-08
170055888	100	hypothetical protein CpipJ_CPIJ013804 [C	0.260	0.58	0.555	2e-08
443735010	120	hypothetical protein CAPTEDRAFT_226766 [	0.224	0.416	0.607	5e-07
195060185	108	GH17584 [Drosophila grimshawi] gi|193896	0.201	0.416	0.586	5e-07
118777045	100	Anopheles gambiae str. PEST AGAP012705-P	0.210	0.47	0.625	8e-07
91083977	102	PREDICTED: similar to CG3621 CG3621-PA [	0.255	0.558	0.508	1e-06
24639292	103	CG3621 [Drosophila melanogaster] gi|3927	0.201	0.436	0.586	1e-06
195347854	104	GM19202 [Drosophila sechellia] gi|195564	0.201	0.432	0.586	2e-06
17946507	103	RE75088p [Drosophila melanogaster]	0.201	0.436	0.586	3e-06
194768741	104	GF22195 [Drosophila ananassae] gi|190617	0.233	0.5	0.535	3e-06

>gi|195397563|ref|XP_002057398.1| GJ17063 [Drosophila virilis] gi|194147165|gb|EDW62884.1| GJ17063 [Drosophila virilis]

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           LRF+D  +  RTQP P LP+GP H+LSANYY  RDG HEV+PP  L
Sbjct: 28  LRFED-ALADRTQPQPELPDGPSHILSANYYCTRDGRHEVQPPIDL 72

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170055888|ref|XP_001863783.1| hypothetical protein CpipJ_CPIJ013804 [Culex quinquefasciatus] gi|167875751|gb|EDS39134.1| hypothetical protein CpipJ_CPIJ013804 [Culex quinquefasciatus]

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 5/63 (7%)

Query: 108 NPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGE 167
           N LRF+D  I  RTQP PNLPEGPHH LSAN+YV RD   EV PP  L     +Q  +GE
Sbjct: 27  NALRFED-GIAARTQPPPNLPEGPHHKLSANHYVIRDARREVAPPMNL----TSQALLGE 81

Query: 168 SHT 170
             +
Sbjct: 82  KSS 84

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443735010|gb|ELU18865.1| hypothetical protein CAPTEDRAFT_226766 [Capitella teleta]

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 102 YKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPP 152
           Y+    N LRF   NI PRTQPLPNLP G  H LSANYY  RDG  +V+PP
Sbjct: 23  YRTEAKNYLRFAQ-NITPRTQPLPNLPFGVSHKLSANYYHTRDGRRDVQPP 72

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|195060185|ref|XP_001995765.1| GH17584 [Drosophila grimshawi] gi|193896551|gb|EDV95417.1| GH17584 [Drosophila grimshawi]

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           LRF+D  +  RTQP P LP+GP H+ SANYY  RDG  EV+PP  L
Sbjct: 28  LRFED-GLADRTQPQPELPDGPSHIYSANYYCTRDGRREVQPPIDL 72

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118777045|ref|XP_307312.2| Anopheles gambiae str. PEST AGAP012705-PA [Anopheles gambiae str. PEST] gi|118777538|ref|XP_308132.2| AGAP003900-PA [Anopheles gambiae str. PEST] gi|116132703|gb|EAA03888.3| AGAP003900-PA [Anopheles gambiae str. PEST] gi|116133122|gb|EAA03125.3| AGAP012705-PA [Anopheles gambiae str. PEST]

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 108 NPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           N LRF+D  I  RTQP PNLP+GP H LSAN+YV RD   EV PP  L
Sbjct: 27  NALRFED-GIAARTQPPPNLPDGPAHKLSANHYVIRDARREVAPPIDL 73

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083977|ref|XP_975169.1| PREDICTED: similar to CG3621 CG3621-PA [Tribolium castaneum] gi|270008257|gb|EFA04705.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa [Tribolium castaneum]

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIGESH 169
           LRFQD  I  R+ PLPNLP+GP H LS+NYY  RD   EV PP    +  + QK I    
Sbjct: 28  LRFQD-EIATRSPPLPNLPDGPSHCLSSNYYYTRDARREVAPPE---IVASGQKLIASGE 83

Query: 170 T 170
           T
Sbjct: 84  T 84

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24639292|ref|NP_569984.2| CG3621 [Drosophila melanogaster] gi|3927908|emb|CAA15701.1| EG:152A3.7 [Drosophila melanogaster] gi|7290278|gb|AAF45739.1| CG3621 [Drosophila melanogaster] gi|219990779|gb|ACL68763.1| SD16673p [Drosophila melanogaster]

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           LRF+D  +  RTQP P +P+GP H+LSANYY  RDG  EV PP  L
Sbjct: 28  LRFED-GLADRTQPQPEIPDGPSHLLSANYYCQRDGRREVLPPIDL 72

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195347854|ref|XP_002040466.1| GM19202 [Drosophila sechellia] gi|195564721|ref|XP_002105962.1| GD16591 [Drosophila simulans] gi|194121894|gb|EDW43937.1| GM19202 [Drosophila sechellia] gi|194203327|gb|EDX16903.1| GD16591 [Drosophila simulans]

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           LRF+D  +  RTQP P +P+GP H+LSANYY  RDG  EV PP  L
Sbjct: 28  LRFED-GLADRTQPQPEIPDGPSHLLSANYYCQRDGRREVLPPIDL 72

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17946507|gb|AAL49285.1| RE75088p [Drosophila melanogaster]

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
           LRF+D  +  RTQP P +P+GP H+LSANYY  RDG  EV PP  L
Sbjct: 28  LRFED-GLADRTQPQPEIPDGPSHLLSANYYCQRDGRLEVLPPIDL 72

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194768741|ref|XP_001966470.1| GF22195 [Drosophila ananassae] gi|190617234|gb|EDV32758.1| GF22195 [Drosophila ananassae]

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 4/56 (7%)

Query: 110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQI 165
           LRF+D  +  RTQP P LP+GP H+ SANYY  RDG  EV PP  L    A Q+Q+
Sbjct: 28  LRFED-GVADRTQPQPVLPDGPSHLYSANYYCQRDGRREVNPPIDLV---AQQQQL 79

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
FB|FBgn0025839	103	CG3621 [Drosophila melanogaste	0.304	0.660	0.481	2e-10
MGI|MGI:1913666	113	Ndufa7 "NADH dehydrogenase (ub	0.224	0.442	0.519	2.3e-08
RGD|1304597	112	Ndufa7 "NADH dehydrogenase (ub	0.224	0.446	0.519	2.3e-08
UNIPROTKB|F1PLL0	121	NDUFA7 "Uncharacterized protei	0.197	0.363	0.543	3e-08
UNIPROTKB|Q05752	113	NDUFA7 "NADH dehydrogenase [ub	0.188	0.371	0.568	1.5e-07
UNIPROTKB|F1SA62	121	NDUFA7 "Uncharacterized protei	0.188	0.347	0.568	1.5e-07
UNIPROTKB|O95182	113	NDUFA7 "NADH dehydrogenase [ub	0.224	0.442	0.5	1.9e-07
UNIPROTKB|E1C645	101	NDUFA7 "Uncharacterized protei	0.269	0.594	0.462	4.4e-07
WB|WBGene00009740	168	F45H10.3 [Caenorhabditis elega	0.242	0.321	0.472	5.8e-07
ZFIN|ZDB-GENE-040801-169	104	ndufa7 "NADH dehydrogenase (ub	0.327	0.701	0.333	1.6e-06

FB|FBgn0025839 CG3621 [Drosophila melanogaster (taxid:7227)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 38/79 (48%), Positives = 47/79 (59%)

Query:    88 LIARL-ARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGS 146
             LI R+ A LLG  R + +     LRF+D  +  RTQP P +P+GP H+LSANYY  RDG 
Sbjct:    11 LIQRIRAFLLG--REHNLA----LRFED-GLADRTQPQPEIPDGPSHLLSANYYCQRDGR 63

Query:   147 HEVKPPATLYLANAAQKQI 165
              EV PP  L      QKQ+
Sbjct:    64 REVLPPIDLV---EQQKQL 79

GO:0005747 "mitochondrial respiratory chain complex I" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=ISS

MGI|MGI:1913666 Ndufa7 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)" [Mus musculus (taxid:10090)]

 Score = 129 (50.5 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/52 (51%), Positives = 32/52 (61%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
             LR+Q+  I  RTQP P LP GP H LS NYY  RDG  EV PP+ +  +  A
Sbjct:    26 LRYQE--IAKRTQPPPKLPVGPSHKLSNNYYCTRDGRREVVPPSIIMSSQKA 75

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

GO:0070469 "respiratory chain" evidence=IEA

RGD|1304597 Ndufa7 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7" [Rattus norvegicus (taxid:10116)]

 Score = 129 (50.5 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/52 (51%), Positives = 32/52 (61%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
             LR+Q+  I  RTQP P LP GP H LS NYY  RDG  EV PP+ +  +  A
Sbjct:    26 LRYQE--IAKRTQPPPKLPVGPSHKLSNNYYCTRDGRREVVPPSIIMSSQKA 75

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

UNIPROTKB|F1PLL0 NDUFA7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 128 (50.1 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 25/46 (54%), Positives = 30/46 (65%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATL 155
             LR+Q+  I  RTQP P LP GP H LS+NYY  RDG  E  PP+ +
Sbjct:    34 LRYQE--IAKRTQPPPKLPVGPSHKLSSNYYCTRDGRREAVPPSVI 77

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|Q05752 NDUFA7 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7" [Bos taurus (taxid:9913)]

 Score = 122 (48.0 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 25/44 (56%), Positives = 28/44 (63%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPA 153
             LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+
Sbjct:    26 LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRREAMPPS 67

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=IDA

GO:0042773 "ATP synthesis coupled electron transport" evidence=TAS

GO:0005739 "mitochondrion" evidence=TAS

GO:0016491 "oxidoreductase activity" evidence=NAS

GO:0070469 "respiratory chain" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

UNIPROTKB|F1SA62 NDUFA7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 25/44 (56%), Positives = 28/44 (63%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPA 153
             LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+
Sbjct:    34 LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRREAMPPS 75

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|O95182 NDUFA7 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7" [Homo sapiens (taxid:9606)]

 Score = 121 (47.7 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)

Query:   110 LRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAA 161
             LR+Q+  I  RTQP P LP GP H LS NYY  RDG  E  PP+ +  +  A
Sbjct:    26 LRYQE--ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKA 75

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=NAS

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IDA;NAS

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=NAS

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0022904 "respiratory electron transport chain" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E1C645 NDUFA7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 118 (46.6 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 31/67 (46%), Positives = 36/67 (53%)

Query:    87 RLIARLARLL-GTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDG 145
             RLI RL   L G   + K+     LR+ +  I  RTQP P LP GP H L+ NYY  RDG
Sbjct:     6 RLIQRLRNFLAGRDLQAKLA----LRYTE--ISKRTQPPPRLPVGPSHKLADNYYCTRDG 59

Query:   146 SHEVKPP 152
               E  PP
Sbjct:    60 RREAGPP 66

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

WB|WBGene00009740 F45H10.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 121 (47.7 bits), Expect = 5.8e-07, P = 5.8e-07
 Identities = 26/55 (47%), Positives = 30/55 (54%)

Query:   103 KVVVDNPLRFQDYNIV-PRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLY 156
             K V  NPLRF +     P +  LP LP G HH L+ NYY+ RDG   V  P  LY
Sbjct:    47 KAVYQNPLRFPNTQSARPCSAELPALPGGVHHKLADNYYLTRDGRRNVDAPKVLY 101

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

ZFIN|ZDB-GENE-040801-169 ndufa7 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7" [Danio rerio (taxid:7955)]

 Score = 113 (44.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query:    89 IARLARLLGTKRRYKVVVD--NPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGS 146
             +A   +++   R Y    D  + L+ +   +  RTQP P LP GP H  + NYY  RDG 
Sbjct:     1 MATATKIIQRLRNYLSGQDLQSKLQLRYTEVAKRTQPPPKLPVGPSHKFANNYYCTRDGR 60

Query:   147 HEVKPPATLYLANAA 161
              E+ PP  +  +  A
Sbjct:    61 REMVPPTVIMSSQKA 75

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IEA

GO:0042773 "ATP synthesis coupled electron transport" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Z1P6	NDUA7_MOUSE	No assigned EC number	0.5192	0.2242	0.4424	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
pfam07347	97	pfam07347, CI-B14_5a, NADH:ubiquinone oxidoreducta	3e-19

>gnl|CDD|148767 pfam07347, CI-B14_5a, NADH:ubiquinone oxidoreductase subunit B14

 Score = 78.7 bits (194), Expect = 3e-19
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 8/71 (11%)

Query: 87  RLIARL-ARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDG 145
            L+ RL   LLG  R++K      LR+ D  I  RTQP P LP+GP H LSANYY  RDG
Sbjct: 2   PLLQRLRNFLLG--RQHK----LALRYAD-GISKRTQPPPKLPDGPSHKLSANYYCTRDG 54

Query: 146 SHEVKPPATLY 156
             EV PP  + 
Sbjct: 55  RREVTPPIDIV 65

5a (Complex I-B14.5a). This family contains the eukaryotic NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) (EC:1.6.5.3). This is approximately 100 residues long, and forms part of a multiprotein complex that resides on the inner mitochondrial membrane. The main function of the complex is the transport of electrons from NADH to ubiquinone, accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
PF07347	97	CI-B14_5a: NADH:ubiquinone oxidoreductase subunit	100.0
KOG4630|consensus	142		99.95

>PF07347 CI-B14_5a: NADH:ubiquinone oxidoreductase subunit B14

Probab=100.00  E-value=5.6e-38  Score=242.09  Aligned_cols=75  Identities=47%  Similarity=0.779  Sum_probs=71.6

Q ss_pred             HHHHHHHHHhccccccccccCCCccCCCCCCCCCCCCCCCCCCCCCCCcccceeeccCCCCCCCCCeEEEeccchhhhhc
Q psy17946         87 RLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIG  166 (223)
Q Consensus        87 ~fI~~LRdFL~GRkh~ka~~kl~LRYaD~~IS~RTQPPPnLP~GPsHKLS~NYYYtRDaRREV~PPI~I~~~ns~qK~La  166 (223)
                      +|||+|||||+||+|     +++|||+| +||+||||||+||+||+||+|+||||+||+||||+||++||   +++|+|.
T Consensus         2 p~iq~lR~fl~GR~~-----~~~lRy~d-~~s~RTqPpP~lP~Gp~hkls~NyYy~RD~RRev~PP~~i~---s~~k~L~   72 (97)
T PF07347_consen    2 PFIQRLRNFLLGRKH-----KLQLRYAD-TISPRTQPPPNLPGGPSHKLSANYYYTRDARREVQPPIDIV---SSQKQLI   72 (97)
T ss_pred             hHHHHHHHHHccccc-----cccccccc-ccccCCCCCCCCCCCCccccccccccccccccccCCCeEee---ccccccc
Confidence            799999999999988     99999999 99999999999999999999999999999999999999998   6789998


Q ss_pred             cccc
Q psy17946        167 ESHT  170 (223)
Q Consensus       167 a~~~  170 (223)
                      ++++
T Consensus        73 a~~~   76 (97)
T PF07347_consen   73 AGKA   76 (97)
T ss_pred             cccc
Confidence            7763

5a (Complex I-B14.5a); InterPro: IPR009947 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This family contains the eukaryotic NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a). This is approximately 100 residues long, and forms part of a multiprotein complex that resides on the inner mitochondrial membrane [].; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport, 0005743 mitochondrial inner membrane

>KOG4630|consensus

Probab=99.95  E-value=1.9e-29  Score=206.18  Aligned_cols=73  Identities=48%  Similarity=0.751  Sum_probs=68.9

Q ss_pred             HHHHHHHHHhccccccccccCCCccCCCCCCCCCCCCCCCCCCCCCCCcccceeeccCCCCCCCCCeEEEeccchhhhhc
Q psy17946         87 RLIARLARLLGTKRRYKVVVDNPLRFQDYNIVPRTQPLPNLPEGPHHVLSANYYVNRDGSHEVKPPATLYLANAAQKQIG  166 (223)
Q Consensus        87 ~fI~~LRdFL~GRkh~ka~~kl~LRYaD~~IS~RTQPPPnLP~GPsHKLS~NYYYtRDaRREV~PPI~I~~~ns~qK~La  166 (223)
                      .||+++|+||+||   ..+|++++||+| .+|+||||||+||+||+||||+||||||||||+|.||+|||   +++|.+.
T Consensus        11 ~ll~r~Rn~l~g~---~~qhkla~rf~d-~~sprTqppP~lP~GpshkL~aNYY~TRDgRR~v~pp~~lv---ss~k~l~   83 (142)
T KOG4630|consen   11 VLLQRDRNFLLGR---PYQHKLALRFTD-SASPRTQPPPALPGGPSHKLSANYYCTRDGRREVDPPKDLV---SSQKFLG   83 (142)
T ss_pred             HHHHHHhhhccCc---cccCcccccchh-ccCcccCCCCCCCCCcccccccceeeecCCccccCchHHHH---HHHHHhh
Confidence            3999999999999   456799999999 99999999999999999999999999999999999999999   6788876

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00