Psyllid ID: psy17968


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
STCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQVPTSSTCRQAPTSSTGRQAPTSSTYIHAAVRHLPVVDDLKLEH
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
stcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqvptsstcrqaptsstgrqaptsstyIHAAVRhlpvvddlkleh
stcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqaptsstcrqvptsstcrqaptsstgrqaptsstyIHAAVRhlpvvddlkleh
STCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQVPTSSTCRQAPTSSTGRQAPTSSTYIHAAVRHLPVVDDLKLEH
***********************************************************************************************************************************************************YIHAAVRHLPVV*******
S****AP********************************************************************************************************************************************************AVRHLPVV**L****
********************************************************************************************************************************************************SSTYIHAAVRHLPVVDDLKLEH
******************************************************************************************************************************************************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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STCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQVPTSSTCRQAPTSSTGRQAPTSSTYIHAAVRHLPVVDDLKLEH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query174 2.2.26 [Sep-21-2011]
Q6H236 2387 Paternally-expressed gene yes N/A 0.879 0.064 0.193 0.0001
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1 Back     alignment and function desciption
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/155 (19%), Positives = 77/155 (49%)

Query: 2    TCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAP 61
            +C + P  ++C + P  ++  Q P  ++C + P  ++C + P  ++  Q P  ++C + P
Sbjct: 1275 SCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEP 1334

Query: 62   TSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCR 121
              ++  Q P  ++C + P  ++  + P  ++  + P  ++  Q P  ++C + P  ++  
Sbjct: 1335 AQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSYT 1394

Query: 122  QAPTSSTCRQVPTSSTCRQAPTSSTGRQAPTSSTY 156
            + P  ++  + P  ++  Q P  ++  + P  ++Y
Sbjct: 1395 EEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSY 1429




Induces apoptosis in cooperation with SIAH1A. Acts as a mediator between p53/TP53 and BAX in a neuronal death pathway that is activated by DNA damage. Acts synergistically with TRAF2 and inhibits TNF induced apoptosis through activation of NF-kappa-B.
Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query174
377809558 523 lysM domain protein [Pediococcus clausse 0.833 0.277 0.553 2e-30
156392042 352 predicted protein [Nematostella vectensi 0.850 0.420 0.394 2e-25
431902484 1573 Fibronectin type III domain containing 3 0.862 0.095 0.376 6e-21
156392723 277 predicted protein [Nematostella vectensi 0.919 0.577 0.318 7e-21
325289692 764 collagen triple helix repeat-containing 0.879 0.200 0.344 4e-20
392394025 665 hypothetical protein Desde_2503 [Desulfi 0.764 0.2 0.335 7e-20
150017445 914 triple helix repeat-containing collagen 0.885 0.168 0.337 8e-19
156352520157 hypothetical protein NEMVEDRAFT_v1g13982 0.810 0.898 0.297 1e-18
156389641193 predicted protein [Nematostella vectensi 0.890 0.803 0.425 4e-18
390354355 411 PREDICTED: paternally-expressed gene 3 p 0.856 0.362 0.241 7e-18
>gi|377809558|ref|YP_005004779.1| lysM domain protein [Pediococcus claussenii ATCC BAA-344] gi|361056299|gb|AEV95103.1| lysM domain protein [Pediococcus claussenii ATCC BAA-344] Back     alignment and taxonomy information
 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 83/150 (55%)

Query: 6   APTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSST 65
           AP SS   QAP SS   QAP SS   QAP SS   QAP SS   QAP SS   QAP SST
Sbjct: 168 APVSSVASQAPVSSVASQAPVSSVASQAPVSSVASQAPVSSVASQAPVSSVASQAPASST 227

Query: 66  CRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPT 125
              AP SS   QAP SST   AP SS   QAP SST   AP SS   QAP SST   AP 
Sbjct: 228 VSVAPVSSVASQAPASSTASVAPVSSVASQAPASSTASVAPVSSVASQAPVSSTASVAPV 287

Query: 126 SSTCRQVPTSSTCRQAPTSSTGRQAPTSST 155
           SS   Q P SST   AP SS   Q P SST
Sbjct: 288 SSVASQAPASSTASVAPVSSVASQVPASST 317




Source: Pediococcus claussenii ATCC BAA-344

Species: Pediococcus claussenii

Genus: Pediococcus

Family: Lactobacillaceae

Order: Lactobacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|156392042|ref|XP_001635858.1| predicted protein [Nematostella vectensis] gi|156222956|gb|EDO43795.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|431902484|gb|ELK08980.1| Fibronectin type III domain containing 3c [Pteropus alecto] Back     alignment and taxonomy information
>gi|156392723|ref|XP_001636197.1| predicted protein [Nematostella vectensis] gi|156223298|gb|EDO44134.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|325289692|ref|YP_004265873.1| collagen triple helix repeat-containing protein [Syntrophobotulus glycolicus DSM 8271] gi|324965093|gb|ADY55872.1| Collagen triple helix repeat-containing protein [Syntrophobotulus glycolicus DSM 8271] Back     alignment and taxonomy information
>gi|392394025|ref|YP_006430627.1| hypothetical protein Desde_2503 [Desulfitobacterium dehalogenans ATCC 51507] gi|390525103|gb|AFM00834.1| hypothetical protein Desde_2503 [Desulfitobacterium dehalogenans ATCC 51507] Back     alignment and taxonomy information
>gi|150017445|ref|YP_001309699.1| triple helix repeat-containing collagen [Clostridium beijerinckii NCIMB 8052] gi|149903910|gb|ABR34743.1| Collagen triple helix repeat [Clostridium beijerinckii NCIMB 8052] Back     alignment and taxonomy information
>gi|156352520|ref|XP_001622797.1| hypothetical protein NEMVEDRAFT_v1g139821 [Nematostella vectensis] gi|156209414|gb|EDO30697.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|156389641|ref|XP_001635099.1| predicted protein [Nematostella vectensis] gi|156222189|gb|EDO43036.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|390354355|ref|XP_003728310.1| PREDICTED: paternally-expressed gene 3 protein-like [Strongylocentrotus purpuratus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query174
SGD|S000003912 1161 DAN4 "Cell wall mannoprotein w 0.856 0.128 0.438 4e-24
FB|FBgn0003372 1286 Sgs1 "Salivary gland secretion 0.798 0.108 0.419 3.5e-21
FB|FBgn0040950 471 Muc26B "Mucin 26B" [Drosophila 0.804 0.297 0.393 9e-19
ZFIN|ZDB-GENE-080219-17306 zgc:174985 "zgc:174985" [Danio 0.867 0.493 0.392 4.6e-18
UNIPROTKB|P98088 5030 MUC5AC "Mucin-5AC" [Homo sapie 0.770 0.026 0.5 8e-18
DICTYBASE|DDB_G0295719 616 DDB_G0295719 "unknown" [Dictyo 0.839 0.237 0.401 4.4e-17
UNIPROTKB|Q6H236 2387 PEG3 "Paternally-expressed gen 0.890 0.064 0.267 2.2e-16
UNIPROTKB|F1MBU3 2352 F1MBU3 "Uncharacterized protei 0.867 0.064 0.281 1.2e-15
FB|FBgn0033862 607 CG6209 [Drosophila melanogaste 0.919 0.263 0.193 1.8e-15
CGD|CAL0004775 1409 MSB2 [Candida albicans (taxid: 0.879 0.108 0.335 6e-15
SGD|S000003912 DAN4 "Cell wall mannoprotein with similarity to Tir1p" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
 Score = 289 (106.8 bits), Expect = 4.0e-24, P = 4.0e-24
 Identities = 68/155 (43%), Positives = 85/155 (54%)

Query:     1 STCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQA 60
             ST    PT+ST    PT+ST    PT+ST    PT+ST    PT+ST    PT+ST    
Sbjct:   147 STTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTT 206

Query:    61 PTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTCRQAPTSSTC 120
             PT+ST    PT+ST    PT+ST     T+ST  Q  T ST    PT+S+    PT+ST 
Sbjct:   207 PTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKST---TPTTSSTSTTPTTST- 262

Query:   121 RQAPTSSTCRQVPTSSTCRQAPTSSTGRQAPTSST 155
                PT+ST    PT+ST     T+ST   APT+ST
Sbjct:   263 --TPTTSTTSTAPTTSTTSTTSTTSTISTAPTTST 295


GO:0005618 "cell wall" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0005576 "extracellular region" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0009277 "fungal-type cell wall" evidence=IDA
GO:0031225 "anchored to membrane" evidence=IEA
GO:0008150 "biological_process" evidence=ND
GO:0003674 "molecular_function" evidence=ND
FB|FBgn0003372 Sgs1 "Salivary gland secretion 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0040950 Muc26B "Mucin 26B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080219-17 zgc:174985 "zgc:174985" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P98088 MUC5AC "Mucin-5AC" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0295719 DDB_G0295719 "unknown" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q6H236 PEG3 "Paternally-expressed gene 3 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBU3 F1MBU3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0033862 CG6209 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
CGD|CAL0004775 MSB2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00