Psyllid ID: psy18037

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390
MIAQALFDSEYIKCISGPGSGAGDSKFSLDALYTIVCQDEEESSPVDPLRIHSSNSTSSFHLDLNLEDSTASIRPNKNSATRTTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEKHTRSNSESTGDVKVAIQKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGGRLTPSSKKLSPPPTVAPPAPVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPKTKSTDSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP
cccccccccccEEEcccccccccccEEccccccEEEEcccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHccccccccccHHHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccccEEEEEEEEEccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccEEccHHHHccccccccccEEEEEEEcccccEEEEEEcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccEEEEcccccccccHHHHHHHHHcccccccccccccccccccEEEEEEccEEEEEEEEcccccccccccccEEEEEEcccccccccccccccHHHcccHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHHccccccccccccEEEcccccccHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccHHHHHHHHccccccccccccccccccEEEccccccccccEEEEccHHHHHHHHHHHcHHHHHHHHHHHcccccccccccccccccccccccEEEEcccHHHHHHHHHccHHHHHHHHHHHcccccccEEEEEEEEEEEEEEcccEEEEEEEEEEccccccccccEEEccccccccccccccccccccEEEcccccccccc
cHHHHEEEHHHHHHcccccccccccHHHHHccccEEEccccccccccHHcEEccccccEEEEEccccccccEEEEEHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccccEEEEEEEEEcccccccccccccccEEEEEcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccEcccHHHHccccccccccEEEEEEEccccEEEEEEEcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccHccccccccccccHHHHHHHHHHHcccccccHHcccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEccccccccccccccHcccccccHHHHccHHHcccccccccccccccccccccccccccEEcccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccEEEEEEcccccccHHHHHHHHHcccccccccccccccHHHHHEEEEccccEEEEEEEEcccccccccccEEEEEEEccccccccccccccHHHHcccHHHEEEEEEccHHHHHHHccccccccHHHHHHHccccEEEEEEEccEEEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHcccHcccccccHccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccEEEEccccccHHHHHHHccHHHHHHHHHHHccccccccccccccEEEEcccccccEEEEEEEHHHHHHHHHHcccccHHHHHHHHHccccccccccccccEEEEEcHHHHHHHHHHHccccHHHHHHHHHHccccccccccccEEEEEcccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEEEEEEEEEccccEEEEEEEEEHHHHcccccEEEEEccccccccccccccccccccEEEEcccHHHccc
miaqalfdseyikcisgpgsgagdskfSLDALYTIVCqdeeesspvdplrihssnstssfhldlnledstasirpnknsatrttreisenpnllpvhSLQKIIQAyrrdpirpnnakadAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIeevkpdqnidsfdirQYVQIkkvdggtrndsFVVSGIVhsknvshksmltalnnpkiLILQCAIVYQRVEgkllslepvIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQihlgtcsrfsvkklsdsnktlmffegcafphkgstvILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQtkkpilqspsdsvadiipkpstdekhtrsnsestgdvkvaiqkpasqsiqdasdplqsepnvtspmspqdlhlavdnvptnsfrKALDDIILsvsptikytvpylenetgkkcdlrkyfpdniywsaqldpaapivknetpvetiprhtlelkephAFLSEVLTETCDSAKVRSSLALYRAaggrltpsskklsppptvappapvstkidalqpsnhqrlpVLIYIcrspihspgfcvepctinmdfyarndiplgsflekycfrrdykcpsatcliptleherwfihgngsvcvglceienrppeayderiimwnwcpsckqvssilpmssdTWRLSLAKFLDLRfncvplgcktascthhlhqeQVHYFAYNNIVASFIYTRIKLYEvcipsttlkkSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLhtnqtdatmntlqplLVKDQANLKQKVDDiqmkltdpdvmnnLWNLEDSilhtnqtdatmntlqplLVKDQANLKQKVDDiqmkltdpdvmnnLWNLEDSIVKLKRAVVESINNWNSrlmktrpktkstdsskSLLTDIvegtpttetsteyvfdseeseesdvdhvddsdtvktkVPRMKAILSqllptnvpslpisnsLVEAQQHHTlalgcsvpvvhsskslltdivegtpttetsteyvfdseeseesdvdhvddsdtvktkVPRMKAILSqllptnvpslpisnsLVEAQQHHtlalgcsvpvvvyeqepsSIISYALSSFDYQYKLEELKAAHEietneckiphidikfsdtaanFSVKMYFADLFAELRkfscpegeESFIRSLSRCIRWearggksgsnfcktkddrFILKEMSRLEKGEESFIRSLSRCIRWearggksgsnfcktkddrFILKEMSRLEMDSFLTFAPNYYNYVKNcfenssptlLCKIFGVFRVICQnnnsktrsNLLVMENLFHSRNIKLRFDLkgslrnrlvdtsldsmdsdavnfgqneeiylp
miaqalfdSEYIKCISGPGSGAGDSKFSLDALYTIVCQDEeesspvdplRIHSSNSTSSFHLDLNledstasirpnknsatrttreisenpnllpvhSLQKIIQAyrrdpirpnNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEevkpdqnidsfdIRQYVQIKkvdggtrnDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQqlgitlvlnVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFfegcafphkgstvilrgasrkelmKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTkkpilqspsdsvadiipkpstdekhtrsnsestgdvkVAIQKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVPTNSFRKALDDIILSvsptikytvpylenetgkkcdLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAggrltpsskklspppTVAPPAPVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESInnwnsrlmktrpktkstdsskslltdivegtpttetsteyvfdseeseesdvdhvddsdtvkTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLtdivegtpttetsteyvfdseeseesdvdhvddsdtvkTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWearggksgsnfcktkddrfilkemsrlekgeesfIRSLSRCIRwearggksgsnfcktkdDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLvdtsldsmdsdavnfgqneeiylp
MIAQALFDSEYIKCISGPGSGAGDSKFSLDALYTIVCQDEEESSPVDPLRIHSSNSTSSFHLDLNLEDSTASIRPNKNSATRTTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEKHTRSNSESTGDVKVAIQKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGGRltpsskklsppptvappapvstKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPktkstdsskslltdIVEGTPTTETSTEYVFdseeseesdvdhvddsdtvktkvPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTPTTETSTEYVFdseeseesdvdhvddsdtvktkvPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP
*****LFDSEYIKCISGP*****DSKFSLDALYTIVCQ*********************************************************VHSLQKIIQAYR******************F*SHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTK**********************************************************************LAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYR**************************************RLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWN*****************************************************************AILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVE****************************************AILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEM*******ESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLV***********************
**AQALFDSEYIKCISG********KFSLDAL*************************************TASIRPNKNSATRTTR*****PNLLPVHSLQKIIQAYRRDPI*************KFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAY*****************************************************************************VDNVPTNSFRKALDDIILSVSPTIKYTV************LRKYFPDNIY***************************************************LALYR****************************IDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGL**********YDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTD****T*****VKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQAN***********************************************************************************************************************************************************************************************************************************************************************************************************************************************CKTKDDRFILKEMSRLEKGEESFIRSLSRCIRW***GGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLR*************DAVNFGQNEEIYLP
MIAQALFDSEYIKCISGPGSGAGDSKFSLDALYTIVCQD*********LRIHSSNSTSSFHLDLNLEDSTASIRPNKNSATRTTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKP***************DVKVAIQKPA*********************SPQDLHLAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGG*******************PVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMK************SLLTDIVEGTP******************************TKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTP******************************TKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP
MIAQALFDSEYIKCISGPGSGAGDSKFSLDALYTIVCQDEEESSPVDPLRIHSSNSTSSFHLDLNLEDSTASIRPNKNSATRTTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADI********************************************************LAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQL***************************AFLSEVLTETCDSAKVRSSLALYRAAGG************************IDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLT**************************************************************************************************************************************************************************************RMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKA*********KIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP
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MIAQALFDSEYIKCISGPGSGAGDSKFSLDALYTIVCQDEEESSPVDPLRIHSSNSTSSFHLDLNLEDSTASIRPNKNSATRTTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEKHTRSNSESTGDVKVAIQKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGGRLTPSSKKLSPPPTVAPPAPVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPKTKSTDSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1390 2.2.26 [Sep-21-2011]
O96838 1809 Putative 1-phosphatidylin yes N/A 0.827 0.635 0.335 1e-165
O59722 1932 1-phosphatidylinositol 3- yes N/A 0.486 0.349 0.267 2e-66
Q9Z1T6 2097 1-phosphatidylinositol 3- yes N/A 0.193 0.128 0.482 7e-65
Q9Y2I7 2098 1-phosphatidylinositol 3- yes N/A 0.484 0.320 0.278 5e-63
P34756 2278 1-phosphatidylinositol 3- yes N/A 0.183 0.111 0.386 3e-45
B0G126 2656 1-phosphatidylinositol 3- yes N/A 0.185 0.097 0.316 2e-36
Q9LKI7558 T-complex protein 1 subun N/A N/A 0.206 0.514 0.288 2e-25
Q54TH8530 T-complex protein 1 subun no N/A 0.166 0.437 0.304 4e-23
P50143547 T-complex protein 1 subun N/A N/A 0.153 0.389 0.323 2e-22
P48605544 T-complex protein 1 subun no N/A 0.185 0.474 0.304 5e-22
>sp|O96838|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2 Back     alignment and function desciption
 Score =  583 bits (1503), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 447/1331 (33%), Positives = 664/1331 (49%), Gaps = 181/1331 (13%)

Query: 118  ADAALTDKFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQ-NIDSFDIRQY 176
            A + L   +  H  +LL Q+L   +L   W  V+  L        KP+  + D  DIR Y
Sbjct: 451  ATSKLLASYCEHEEQLLAQMLRAHNLDQEWDKVLQMLCSTAANHFKPEHCSNDLMDIRNY 510

Query: 177  VQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLE 236
            V  KKV GG R DS +V G+  SKNV+HK M T +  P+IL+LQC IVY+R+EGK +++E
Sbjct: 511  VNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIE 570

Query: 237  PVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIAR 296
             V++QE EYLRNV ARI + KP++VLV +NVA +AQ+ L+   +TLVL+VK +V+ER++R
Sbjct: 571  TVLLQEKEYLRNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSR 630

Query: 297  CTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRK 356
              + D+V S++  +    LG C+ F ++  +   KTLMFFE    P +G T +LRG S  
Sbjct: 631  TLQCDIVSSIESNITMPKLGYCNDFYIRNYN--GKTLMFFEKLTNP-RGYTCLLRGGSNA 687

Query: 357  ELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEK 416
            EL +VKRV S +++  YNW+LE S L++E A  +  K  I  S   S     PK  T E 
Sbjct: 688  ELTRVKRVASALLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETS-----PKTET-EA 741

Query: 417  HTRSNSESTGDVKV--AIQKPASQSIQDASDPL---QSEPNVTSPMSPQDLH-LAVDNVP 470
              RS      + K    I    S+++ D +DPL   Q+E   TSP +P  +  LAV+   
Sbjct: 742  ELRSKRPIILERKSEDKITTIVSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPRY 801

Query: 471  TNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQ-----LDPAAP 525
             N FR AL   +LSVSP + + +PYLE E G+KC LRK FP  +Y+S Q     L+    
Sbjct: 802  DNRFRTALSSTLLSVSPFLTFPLPYLETEQGRKCKLRKLFPAELYFSKQWSRTGLERPDS 861

Query: 526  IVKNETPVETIP---RHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGGRLTPSSK 582
            +   E   ++ P    + ++L   H F+   +T    S  ++S LA +R+ GGRL     
Sbjct: 862  MGDGEAG-KSEPGNKENQMQLLPAHDFVLMKITAPASSRDIQSKLAEFRSFGGRLPKGKA 920

Query: 583  KLSPPP-----TVAPPAPVSTK---IDALQPSNHQRLPVLI-YICRSPIHSPGFCVEPCT 633
             +  P       +  P  VS +    DAL P NHQRLPVL      +P     FC  P  
Sbjct: 921  PMLRPKKKNAEVIQRPQKVSEEQLYKDALDPQNHQRLPVLFCSFHYNPKGVSSFCKLPML 980

Query: 634  INMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIEN 693
            ++M FY + DI L  FL++YC   +  CPS  C +P L H R ++H  G V V L E   
Sbjct: 981  LDMKFYGQYDIMLEQFLQRYCCLFNSMCPS--CNLPMLGHVRRYVHSLGCVHVYLTEDLT 1038

Query: 694  RPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTAS---- 749
            R   +   RI   +WC  C   +  +P+S     LSLAK+L++RF+      +  S    
Sbjct: 1039 R---SDPTRIYFTSWCSICNATTPTIPLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAE 1095

Query: 750  -----CTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSL-STFDKNGLFEE 803
                 C H LH++ VH+F++  + A F YT ++++E  +PS T++  L   F    + EE
Sbjct: 1096 QGGTVCEHSLHRDYVHHFSFRGVGAKFQYTPVEVWETDLPSLTVQLDLPQPFQSAQVQEE 1155

Query: 804  VKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMN 863
            +K +S+ G EV++ + E++    T+                                   
Sbjct: 1156 IKNFSIKGHEVYNRIHERIADLATEE---------------------------------- 1181

Query: 864  NLWNLEDSILHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSI 923
                 E+S L        +  L+ +L  DQ   KQK++ +   LTD       ++  D++
Sbjct: 1182 -----ENSPL--------VQHLKTMLTHDQFIFKQKIEIVHTLLTDNRA--TAYDTSDAL 1226

Query: 924  VKLKRAVVESINNWNSRLMKT---------------------RP-KTKSTDSSKSLLTDI 961
               +RA+ ESI  W  RL +                      RP + ++ DSSK   + +
Sbjct: 1227 AMARRALAESIELWGPRLQEIEKLTAKQAHHIDSGTICTEELRPEQVQTADSSKVTTSSL 1286

Query: 962  ----------VEGTPTTETSTEYVFDSEESEESDVDHVDDSDT-VKTKVPRMKAILSQLL 1010
                       E T T  ++++ V D   S    +D +  S   V +    ++ IL+QLL
Sbjct: 1287 PKENDPLECPSEDTETGASNSQTVLDKNFS----IDQMLASTVNVYSDKKSIRKILTQLL 1342

Query: 1011 PTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTPTTETSTEYVFDSEE 1070
            P+     P+  S   AQ H TL LG S+P+ H  ++ L+ ++     + TS +Y    +E
Sbjct: 1343 PSGNQVNPL-QSPFPAQDHLTLPLG-SIPI-HVRETDLSSVIA---YSLTSMDYQKAIDE 1396

Query: 1071 SEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPV 1130
            +E ++ +    S  +K K+P         L  +V     S SL     + + A   SVP 
Sbjct: 1397 AE-ANSNAAHSSPQLKRKIP---------LAESVSDAEDSPSLSRTSSNTSAAPNASVP- 1445

Query: 1131 VVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYF 1190
                  P++  S +           E K+   I+  +   PHI + F D +  F  K+YF
Sbjct: 1446 -----SPATAASES-----------EEKSKERIK--QPPSPHITLAFQDHSCQFQCKIYF 1487

Query: 1191 ADLFAELRKFSC--PEGEESFIRSLSRC-IRWEAR--GGKSGSN--FCKTKDD----RFI 1239
            A  F  +R  S   P+ ++S  R L +  +R E R    ++GS     +   D    R  
Sbjct: 1488 AREFDAMRSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEMELVRKPSDVGAPRTT 1547

Query: 1240 LKEMSRLEKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFA 1299
              + ++ E    +  RSL + ++WEARGGKSGS FCKT DDRF+LKEM+  +M  F  FA
Sbjct: 1548 EDDSNQEEDARIALARSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSRDMTIFEPFA 1607

Query: 1300 PNYYNYVKNCFENSSPTLLCKIFGVFRVICQNNNSKTRSNLLVMENLFHSRNIKLRFDLK 1359
            P Y+ Y+  C +   PTLL KIFGVFRV  +  +S    +++VMENLF+  NI+ +FDLK
Sbjct: 1608 PKYFEYIDRCQQQQQPTLLAKIFGVFRVSVKKKDSFVERSVMVMENLFYGCNIENKFDLK 1667

Query: 1360 GSLRNRLVDTS 1370
            GS RNRLVD S
Sbjct: 1668 GSERNRLVDPS 1678
The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. Has a role at a late stage in endosome-related membrane trafficking, at a point when signal termination has occurred. Is not required for receptor silencing.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0
>sp|O59722|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2 Back     alignment and function description
>sp|Q9Z1T6|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3 Back     alignment and function description
>sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 Back     alignment and function description
>sp|P34756|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3 Back     alignment and function description
>sp|B0G126|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1 Back     alignment and function description
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1 Back     alignment and function description
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1 Back     alignment and function description
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2 Back     alignment and function description
>sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1390
91078242 1775 PREDICTED: similar to 1-phosphatidylinos 0.853 0.668 0.357 0.0
328707557 1710 PREDICTED: 1-phosphatidylinositol-3-phos 0.816 0.663 0.367 0.0
427788341 1989 Putative phosphatidylinositol-4-phosphat 0.827 0.578 0.344 0.0
242009097 1864 FYVE finger-containing phosphoinositide 0.685 0.511 0.372 0.0
157128939 1713 1-phosphatidylinositol-4-phosphate 5-kin 0.776 0.629 0.330 1e-167
158292793 1761 AGAP005216-PA [Anopheles gambiae str. PE 0.865 0.683 0.317 1e-167
194755749 1812 GF13221 [Drosophila ananassae] gi|190621 0.827 0.634 0.329 1e-165
198460669 1844 GA19534 [Drosophila pseudoobscura pseudo 0.828 0.624 0.322 1e-164
20130093 1809 fab1, isoform A [Drosophila melanogaster 0.827 0.635 0.335 1e-163
195335392 1815 GM19947 [Drosophila sechellia] gi|194126 0.815 0.624 0.326 1e-162
>gi|91078242|ref|XP_970298.1| PREDICTED: similar to 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Tribolium castaneum] gi|270003932|gb|EFA00380.1| hypothetical protein TcasGA2_TC003226 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1495 (35%), Positives = 761/1495 (50%), Gaps = 308/1495 (20%)

Query: 2    IAQALFDSEYIKCISGPGSGAGDSKFSLDALYTI-------------------VCQDEEE 42
            I+QAL +  YI+C+S P S           ++                     V Q  +E
Sbjct: 323  ISQALLEGGYIECVSDPCSFVDGYALYKPGIFVTPEVLNHNYFEVPNQEEPIWVQQIPQE 382

Query: 43   SSPVDPLRIHSS-------NSTSSFHLDLNLEDSTASI-RPNKNSATR------------ 82
            SS  D      S        S+SS+ LDLN+E +T  + RP  +S +             
Sbjct: 383  SSTTDSDNEQVSVKKRGPLTSSSSYMLDLNVEANTVYLSRPLASSYSIQSGDSGDVSCCE 442

Query: 83   ---TTREISENPNLLPVHSLQKIIQAYRRDPIRPNNAK--ADAALTDKFESHRNKLLQQL 137
               TT   SE    +P          +    +R  N +  A   LT+ ++ H   LL+QL
Sbjct: 443  TDITTVRTSEQREFVPEAGW------HNASNLREENGEKLAYNLLTEAYQQHEQGLLKQL 496

Query: 138  LIVESLSMSWASVILPLAEKIIEEVKPDQNIDS--FDIRQYVQIKKVDGGTRNDSFVVSG 195
            L    L +SWA VI+PL  +II  ++PD+N D+   DIR Y++ KK+ GG+R D+ ++SG
Sbjct: 497  LASNGLLLSWADVIIPLCNEIINVIRPDKNHDAEDLDIRHYIKFKKLSGGSRTDTKLISG 556

Query: 196  IVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISA 255
            IV +KNV+HK MLT ++NPKIL+LQC+IVYQR EG+L+SLEPV+MQE EYLR+V ARI A
Sbjct: 557  IVFTKNVAHKGMLTEIDNPKILLLQCSIVYQRTEGRLMSLEPVLMQEHEYLRHVAARIVA 616

Query: 256  LKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHL 315
            L+PDIVLV RNV+RLAQ+ L+Q GITLV NVK +VL+++ARCT ADLV +VD  + +  L
Sbjct: 617  LQPDIVLVHRNVSRLAQDLLRQHGITLVHNVKQSVLDQLARCTEADLVTAVDAHIGRPRL 676

Query: 316  GTCSRFSVKKLS---DSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVL 372
            GTC +F +K  +      KTLMFFEG    H G TV+LRG SR+EL ++++V SF ++  
Sbjct: 677  GTCKKFYLKTYNVDKGGAKTLMFFEGLPMVHLGGTVLLRGGSRQELTRLEKVVSFCLFAS 736

Query: 373  YNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEKHTRSNSESTGDVKVAI 432
            YNW+LE S LMDE A   Q   P  +   DS  +  P+  T  K+     +S G      
Sbjct: 737  YNWRLEKSFLMDEFA---QPPNPNCEFLEDSSKESSPRLQTVVKY-----DSGG------ 782

Query: 433  QKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVP-TNSFRKALDDIILSVSPTIKY 491
            +K  S+ ++D +DPLQS  +    M+     LAV  +P +N+FRK+LDD IL +SP + +
Sbjct: 783  KKMNSEMVEDFTDPLQS--SFVESMTEGKEILAVAELPFSNNFRKSLDDSILCISPYLMF 840

Query: 492  TVPYLENETGKKCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEP----- 546
            +VPYLE E GKKC LRK+FP  IY+S Q         N+T V+ I     ++KE      
Sbjct: 841  SVPYLETEVGKKCKLRKFFPTEIYFSEQF-------TNQTKVKIIKDIGEDVKENEQKSV 893

Query: 547  ---HAFLSEVLTETCDSAKVRSSLALYRAAGGRLTPSSKKLSPPPTVAPP------APVS 597
               H FL   +T + D+ +++S LA +RA GG          PP  V             
Sbjct: 894  KPLHPFLRTKITTSVDNNEIQSLLAHFRACGGSYEKREILCKPPVQVDEEILQNKDKNYY 953

Query: 598  TKIDALQPSNHQRLPVLI-YICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFR 656
             K+D L+ +NHQRL VL         +SP FCV P  +NM+FY  NDIPLG FLE+YCFR
Sbjct: 954  NKLDVLEINNHQRLSVLFCSFSHESTNSPAFCVNPWIVNMNFYGSNDIPLGCFLERYCFR 1013

Query: 657  RDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVS 716
              Y CPS  C  P  +H R F+H  G V + L   +N   E  +E I+MW+WC  C+ VS
Sbjct: 1014 STYNCPSKPCGTPMFKHIRRFVHNAGCVSISLNNFDN---EFTEENIVMWSWCTKCQSVS 1070

Query: 717  SILPMSSDTWRLSLAKFLDLRFNCVPLGCKTAS-CTHHLHQEQVHYFAYNNIVASFIYTR 775
             ++ MS+DTW  S AK+L+L+F       +  + C H LH +   YF Y N VASF YT 
Sbjct: 1071 PVVLMSADTWSFSFAKYLELKFYGGLYSRRGNTPCGHSLHHDHYQYFGYKNSVASFKYTP 1130

Query: 776  IKLYEVCIPSTTLKKSLSTFDKNG-LFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTL 834
            I+++++ +P   +        +   L +E++  +  G E++S++LEKL          + 
Sbjct: 1131 IQVWDISLPPPVIYIQYDIEKQQTELIDEIRTMAQKGHEIYSLILEKL----------SC 1180

Query: 835  QPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDATMNTLQPLLVKDQA 894
             P  ++   NLKQ                                        LL+K+Q 
Sbjct: 1181 IPAELEGLGNLKQ----------------------------------------LLLKEQT 1200

Query: 895  NLKQKVDDIQMKLTDPDVMNN------------LWNLEDSIVKLKRAVVESINNWNSRLM 942
              KQKV+++Q+KLT P + N              W + DS++++KR +VE+++NWN RL 
Sbjct: 1201 QFKQKVEEVQLKLTSPTIENKQFDETPEKLHIAYWKISDSLIRIKRLIVETVDNWNLRLS 1260

Query: 943  KTRPKTKSTDSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRM 1002
            ++  K       ++  +D+   +PT       + +++   E+D+ H + S++  T   ++
Sbjct: 1261 ESARKRDDKKKDRTSYSDL--ESPT-------IPENKTLSETDISHSETSNSA-TITKKI 1310

Query: 1003 KAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVHSSKSLLTDIVEGTPTTETST 1062
            K++                   +      L++  S    H S+S      +GT       
Sbjct: 1311 KSL-------------------DQSDESELSMSSSPKCHHRSQS------DGTVM----- 1340

Query: 1063 EYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTL 1122
                 S   E++D     D  TVK        ILSQLLP++     I N     Q H+TL
Sbjct: 1341 -----SHNEEQNDCKKDSDKKTVKN-------ILSQLLPSSSALTLIPNPF-NPQDHYTL 1387

Query: 1123 ALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIE------------------ 1164
              G SVP++VYE EPSSII+YAL+S+DY+   E+L      E                  
Sbjct: 1388 PTGVSVPIIVYESEPSSIIAYALNSYDYKKSFEDLTKKSNTEQTPSPIVKRKNPNTDKND 1447

Query: 1165 ------------------------------TNECKIPHIDIKFSDTAANFSVKMYFADLF 1194
                                          T + K  HI+++F DT  NF  + YFA+ F
Sbjct: 1448 ETSGLLGFLRNKNDLNSPVSASESPQNIEVTEKSKNLHIEVQFQDTHCNFFCRTYFAEKF 1507

Query: 1195 AELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEKGEESFI 1254
            A LR    P                                             GEE ++
Sbjct: 1508 ASLRGLVLP--------------------------------------------IGEEGYV 1523

Query: 1255 RSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSS 1314
            RSL+R ++W ARGGKSGSNF KT DDRF+LKEMS+ E+  FL  APNY+NY++ C+    
Sbjct: 1524 RSLARSVQWNARGGKSGSNFAKTADDRFVLKEMSKSEVQLFLESAPNYFNYMQKCYGTGQ 1583

Query: 1315 PTLLCKIFGVFRVICQNNNSKT--RSNLLVMENLFHSRNIKLRFDLKGSLRNRLV 1367
            PTLL KI G++++I +NNNS    R+NLLVMENLF+ R +  +FDLKGS+RNRLV
Sbjct: 1584 PTLLGKIIGIYQIIFKNNNSNVTLRTNLLVMENLFYKRTVSQKFDLKGSMRNRLV 1638

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328707557|ref|XP_001947777.2| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|427788341|gb|JAA59622.1| Putative phosphatidylinositol-4-phosphate 5-kinase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|242009097|ref|XP_002425329.1| FYVE finger-containing phosphoinositide kinase, putative [Pediculus humanus corporis] gi|212509103|gb|EEB12591.1| FYVE finger-containing phosphoinositide kinase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157128939|ref|XP_001661558.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Aedes aegypti] gi|108872433|gb|EAT36658.1| AAEL011274-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|158292793|ref|XP_314118.4| AGAP005216-PA [Anopheles gambiae str. PEST] gi|157017160|gb|EAA09386.5| AGAP005216-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|194755749|ref|XP_001960145.1| GF13221 [Drosophila ananassae] gi|190621443|gb|EDV36967.1| GF13221 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|198460669|ref|XP_001361784.2| GA19534 [Drosophila pseudoobscura pseudoobscura] gi|198137093|gb|EAL26363.2| GA19534 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|20130093|ref|NP_611269.1| fab1, isoform A [Drosophila melanogaster] gi|45552711|ref|NP_995880.1| fab1, isoform B [Drosophila melanogaster] gi|47115589|sp|O96838.2|FYV1_DROME RecName: Full=Putative 1-phosphatidylinositol 3-phosphate 5-kinase; Short=Phosphatidylinositol 3-phosphate 5-kinase; AltName: Full=Type III PIP kinase; Short=PIPkin-III gi|7302711|gb|AAF57789.1| fab1, isoform A [Drosophila melanogaster] gi|45445493|gb|AAS64818.1| fab1, isoform B [Drosophila melanogaster] gi|256985222|gb|ACV32766.1| GH27216p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195335392|ref|XP_002034350.1| GM19947 [Drosophila sechellia] gi|194126320|gb|EDW48363.1| GM19947 [Drosophila sechellia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1390
FB|FBgn00287411809 fab1 [Drosophila melanogaster 0.473 0.363 0.362 7.4e-155
UNIPROTKB|Q9Y2I7 2098 PIKFYVE "1-phosphatidylinosito 0.205 0.136 0.464 1.6e-151
RGD|1592067 2097 Pikfyve "phosphoinositide kina 0.205 0.136 0.468 1.1e-149
UNIPROTKB|F1PXC7 2100 PIKFYVE "Uncharacterized prote 0.198 0.131 0.484 1.8e-149
MGI|MGI:1335106 2097 Pikfyve "phosphoinositide kina 0.205 0.136 0.468 6e-149
UNIPROTKB|F1N2K7 2102 PIKFYVE "Uncharacterized prote 0.198 0.131 0.473 5.5e-146
ZFIN|ZDB-GENE-030131-9636 2100 pikfyve "phosphoinositide kina 0.225 0.149 0.438 1.2e-145
UNIPROTKB|F1SST9 2105 PIKFYVE "Uncharacterized prote 0.198 0.131 0.477 6.6e-145
UNIPROTKB|F1NNU6 2101 PIKFYVE "Uncharacterized prote 0.236 0.156 0.431 1.8e-139
UNIPROTKB|E9PDH41384 PIKFYVE "1-phosphatidylinosito 0.205 0.206 0.464 9.8e-111
FB|FBgn0028741 fab1 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 977 (349.0 bits), Expect = 7.4e-155, Sum P(4) = 7.4e-155
 Identities = 256/706 (36%), Positives = 367/706 (51%)

Query:    68 DSTASIRPNKNSATRTTREISE----NPNLLPVHSLQKIIQAYRRDPIRPNNAKADAALT 123
             DS+   + +K+S++ T+R +S     NP+  P         A  ++    N  + D   T
Sbjct:   390 DSSLHYKFSKSSSSDTSRTMSPQFEANPHAEPQPPKSMDQSAEEKEKELENELENDRCYT 449

Query:   124 D-------KFESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQ-NIDSFDIRQ 175
                      +  H  +LL Q+L   +L   W  V+  L        KP+  + D  DIR 
Sbjct:   450 TATSKLLASYCEHEEQLLAQMLRAHNLDQEWDKVLQMLCSTAANHFKPEHCSNDLMDIRN 509

Query:   176 YVQIKKVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSL 235
             YV  KKV GG R DS +V G+  SKNV+HK M T +  P+IL+LQC IVY+R+EGK +++
Sbjct:   510 YVNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTI 569

Query:   236 EPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIA 295
             E V++QE EYLRNV ARI + KP++VLV +NVA +AQ+ L+   +TLVL+VK +V+ER++
Sbjct:   570 ETVLLQEKEYLRNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLS 629

Query:   296 RCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASR 355
             R  + D+V S++  +    LG C+ F ++  +   KTLMFFE    P +G T +LRG S 
Sbjct:   630 RTLQCDIVSSIESNITMPKLGYCNDFYIRNYN--GKTLMFFEKLTNP-RGYTCLLRGGSN 686

Query:   356 KELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDE 415
              EL +VKRV S +++  YNW+LE S L++E A  +  K  I  S   S     PK  T E
Sbjct:   687 AELTRVKRVASALLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETS-----PKTET-E 740

Query:   416 KHTRSNSESTGDVKVA--IQKPASQSIQDASDPL---QSEPNVTSPMSPQDLH-LAVDNV 469
                RS      + K    I    S+++ D +DPL   Q+E   TSP +P  +  LAV+  
Sbjct:   741 AELRSKRPIILERKSEDKITTIVSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPR 800

Query:   470 PTNSFRKALDDIILSVSPTIKYTVPYLENETGKKCDLRKYFPDNIYWSAQLDPAA---PI 526
               N FR AL   +LSVSP + + +PYLE E G+KC LRK FP  +Y+S Q        P 
Sbjct:   801 YDNRFRTALSSTLLSVSPFLTFPLPYLETEQGRKCKLRKLFPAELYFSKQWSRTGLERPD 860

Query:   527 VKNETPV-ETIP---RHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAGGRXXXXXX 582
                +    ++ P    + ++L   H F+   +T    S  ++S LA +R+ GGR      
Sbjct:   861 SMGDGEAGKSEPGNKENQMQLLPAHDFVLMKITAPASSRDIQSKLAEFRSFGGRLPKGKA 920

Query:   583 XXXXXXXXXXXXXXX-XKI-------DALQPSNHQRLPVLIYICR-SPIHSPGFCVEPCT 633
                              K+       DAL P NHQRLPVL      +P     FC  P  
Sbjct:   921 PMLRPKKKNAEVIQRPQKVSEEQLYKDALDPQNHQRLPVLFCSFHYNPKGVSSFCKLPML 980

Query:   634 INMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIEN 693
             ++M FY + DI L  FL++YC   +  CPS  C +P L H R ++H  G V V L E   
Sbjct:   981 LDMKFYGQYDIMLEQFLQRYCCLFNSMCPS--CNLPMLGHVRRYVHSLGCVHVYLTEDLT 1038

Query:   694 RPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFN 739
             R       RI   +WC  C   +  +P+S     LSLAK+L++RF+
Sbjct:  1039 RSDPT---RIYFTSWCSICNATTPTIPLSDAAKCLSLAKYLEMRFH 1081
GO:0016310 "phosphorylation" evidence=NAS
GO:0016308 "1-phosphatidylinositol-4-phosphate 5-kinase activity" evidence=ISS;NAS
GO:0044267 "cellular protein metabolic process" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0012506 "vesicle membrane" evidence=ISS
GO:0008270 "zinc ion binding" evidence=ISS
GO:0035556 "intracellular signal transduction" evidence=ISS
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IMP
GO:0000285 "1-phosphatidylinositol-3-phosphate 5-kinase activity" evidence=IMP
GO:0008333 "endosome to lysosome transport" evidence=IMP
GO:0005768 "endosome" evidence=IDA
UNIPROTKB|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1592067 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N2K7 PIKFYVE "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NNU6 PIKFYVE "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E9PDH4 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O96838FYV1_DROME2, ., 7, ., 1, ., 1, 5, 00.33580.82730.6357yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1390
cd03334261 cd03334, Fab1_TCP, TCP-1 like domain of the eukary 1e-108
cd03333209 cd03333, chaperonin_like, chaperonin_like superfam 8e-44
cd00139313 cd00139, PIPKc, Phosphatidylinositol phosphate kin 8e-43
smart00330 342 smart00330, PIPKc, Phosphatidylinositol phosphate 1e-38
pfam01504 255 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 1e-36
TIGR02344525 TIGR02344, chap_CCT_gamma, T-complex protein 1, ga 2e-30
COG5253 612 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5- 4e-27
pfam00118481 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami 5e-25
cd00309464 cd00309, chaperonin_type_I_II, chaperonin families 5e-22
cd03337480 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type 2e-21
cd03343517 cd03343, cpn60, cpn60 chaperonin family 1e-20
TIGR02339519 TIGR02339, thermosome_arch, thermosome, various su 7e-18
COG0459524 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po 9e-16
PLN03185 765 PLN03185, PLN03185, phosphatidylinositol phosphate 8e-13
cd03338515 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type 3e-08
TIGR02345523 TIGR02345, chap_CCT_eta, T-complex protein 1, eta 4e-08
TIGR02342517 TIGR02342, chap_CCT_delta, T-complex protein 1, de 5e-08
cd03336517 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type 2e-07
TIGR02340536 TIGR02340, chap_CCT_alpha, T-complex protein 1, al 4e-07
cd03339526 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty 2e-06
cd03335527 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type 3e-06
PTZ00212533 PTZ00212, PTZ00212, T-complex protein 1 subunit be 4e-06
cd03341472 cd03341, TCP1_theta, TCP-1 (CTT or eukaryotic type 1e-05
TIGR02343532 TIGR02343, chap_CCT_epsi, T-complex protein 1, eps 3e-05
cd03342484 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type 7e-05
cd03340522 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I 1e-04
TIGR02341518 TIGR02341, chap_CCT_beta, T-complex protein 1, bet 0.002
TIGR02346531 TIGR02346, chap_CCT_theta, T-complex protein 1, th 0.003
>gnl|CDD|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 Back     alignment and domain information 
 Score =  341 bits (876), Expect = e-108
 Identities = 140/261 (53%), Positives = 186/261 (71%), Gaps = 7/261 (2%)

Query: 131 NKLLQQLLIVESLS--MSWASVILPLAEKIIEEVKPD-QNIDSFDIRQYVQIKKVDGGTR 187
             LL QLL  E +S   SW  ++LPL  K    VKPD +  D  DIRQYV+IKK+ GG+ 
Sbjct: 1   RALLAQLLKDEGISNDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSP 60

Query: 188 NDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLR 247
           +DS VV G+V +KNV+HK M + + NP+IL+LQ  + YQRVE KLLSL+PVI+QE EYL+
Sbjct: 61  SDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQEKEYLK 120

Query: 248 NVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVD 307
           N+V+RI AL+PD++LV+++V+R+AQ+ L + GITLVLNVK +VLERI+RCT AD++ S+D
Sbjct: 121 NLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADIISSMD 180

Query: 308 VLLNQIHLGTCSRFSVKKLSDSN---KTLMFFEGCAFPHKGSTVILRGASRKELMKVKRV 364
            LL    LGTC  F V+   + +   KTLMFFEGC     G T++LRG   +EL KVKRV
Sbjct: 181 DLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCP-KELGCTILLRGGDLEELKKVKRV 239

Query: 365 TSFMIYVLYNWKLESSLLMDE 385
             FM++  Y+ KLE+S L DE
Sbjct: 240 VEFMVFAAYHLKLETSFLADE 260

Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261
>gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily Back     alignment and domain information
>gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information
>gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases Back     alignment and domain information
>gnl|CDD|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase Back     alignment and domain information
>gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit Back     alignment and domain information
>gnl|CDD|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family Back     alignment and domain information
>gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II Back     alignment and domain information
>gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit Back     alignment and domain information
>gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family Back     alignment and domain information
>gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal Back     alignment and domain information
>gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit Back     alignment and domain information
>gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit Back     alignment and domain information
>gnl|CDD|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit Back     alignment and domain information
>gnl|CDD|239452 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit Back     alignment and domain information
>gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit Back     alignment and domain information
>gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit Back     alignment and domain information
>gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit Back     alignment and domain information
>gnl|CDD|185514 PTZ00212, PTZ00212, T-complex protein 1 subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|239457 cd03341, TCP1_theta, TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit Back     alignment and domain information
>gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit Back     alignment and domain information
>gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit Back     alignment and domain information
>gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit Back     alignment and domain information
>gnl|CDD|211733 TIGR02341, chap_CCT_beta, T-complex protein 1, beta subunit Back     alignment and domain information
>gnl|CDD|233826 TIGR02346, chap_CCT_theta, T-complex protein 1, theta subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1390
KOG0230|consensus 1598 100.0
cd03334261 Fab1_TCP TCP-1 like domain of the eukaryotic phosp 100.0
COG5253 612 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si 100.0
TIGR02344525 chap_CCT_gamma T-complex protein 1, gamma subunit. 100.0
TIGR02339519 thermosome_arch thermosome, various subunits, arch 100.0
KOG0364|consensus527 100.0
cd03343517 cpn60 cpn60 chaperonin family. Chaperonins are inv 100.0
cd03339526 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha 100.0
cd03333209 chaperonin_like chaperonin_like superfamily. Chape 100.0
smart00330 342 PIPKc Phosphatidylinositol phosphate kinases. 100.0
PTZ00212533 T-complex protein 1 subunit beta; Provisional 100.0
cd03340522 TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero 100.0
cd03335527 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape 100.0
cd00139313 PIPKc Phosphatidylinositol phosphate kinases (PIPK 100.0
KOG0361|consensus543 100.0
cd03336517 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper 100.0
TIGR02342517 chap_CCT_delta T-complex protein 1, delta subunit. 100.0
cd03338515 TCP1_delta TCP-1 (CTT or eukaryotic type II) chape 100.0
TIGR02343532 chap_CCT_epsi T-complex protein 1, epsilon subunit 100.0
TIGR02347531 chap_CCT_zeta T-complex protein 1, zeta subunit. M 100.0
cd03337480 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape 100.0
TIGR02345522 chap_CCT_eta T-complex protein 1, eta subunit. Mem 100.0
TIGR02340536 chap_CCT_alpha T-complex protein 1, alpha subunit. 100.0
TIGR02341519 chap_CCT_beta T-complex protein 1, beta subunit. M 100.0
KOG0358|consensus534 100.0
cd03342484 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper 99.98
TIGR02346531 chap_CCT_theta T-complex protein 1, theta subunit. 99.98
PLN03185 765 phosphatidylinositol phosphate kinase; Provisional 99.98
KOG0229|consensus 420 99.97
PF00118485 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon 99.97
cd00309464 chaperonin_type_I_II chaperonin families, type I a 99.97
cd03341472 TCP1_theta TCP-1 (CTT or eukaryotic type II) chape 99.97
KOG0363|consensus527 99.96
KOG0359|consensus520 99.96
KOG0360|consensus545 99.96
COG0459524 GroL Chaperonin GroEL (HSP60 family) [Posttranslat 99.95
PF01504 252 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; 99.94
KOG0362|consensus537 99.91
PRK12849542 groEL chaperonin GroEL; Reviewed 99.89
cd03344520 GroEL GroEL_like type I chaperonin. Chaperonins ar 99.89
PRK00013542 groEL chaperonin GroEL; Reviewed 99.89
PTZ00114555 Heat shock protein 60; Provisional 99.88
PRK12851541 groEL chaperonin GroEL; Reviewed 99.87
TIGR02348524 GroEL chaperonin GroL. This family consists of Gro 99.87
PRK12850544 groEL chaperonin GroEL; Reviewed 99.86
PRK12852545 groEL chaperonin GroEL; Reviewed 99.85
CHL00093529 groEL chaperonin GroEL 99.84
PLN03167600 Chaperonin-60 beta subunit; Provisional 99.82
PRK14104546 chaperonin GroEL; Provisional 99.81
KOG0357|consensus400 99.77
KOG0230|consensus1598 99.06
COG5253612 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si 96.47
cd00139313 PIPKc Phosphatidylinositol phosphate kinases (PIPK 94.45
smart00330 342 PIPKc Phosphatidylinositol phosphate kinases. 94.19
cd0444881 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstr 90.15
cd0444185 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstri 87.85
cd0444383 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstri 86.37
cd0444282 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstri 85.82
cd0443981 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstr 85.55
cd0444983 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Plec 85.16
cd0444093 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstr 84.14
PLN03185 765 phosphatidylinositol phosphate kinase; Provisional 80.1
>KOG0230|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.3e-166  Score=1539.69  Aligned_cols=1052  Identities=35%  Similarity=0.547  Sum_probs=757.4

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------hhHHHHHHHHHHHHHHHhCCCCC-CCCCCcccceEEE
Q psy18037        109 DPIRPNNAKADAALTDKFESHRNKLLQQLLIVESLS-------MSWASVILPLAEKIIEEVKPDQN-IDSFDIRQYVQIK  180 (1390)
Q Consensus       109 ~~~~~~~~~~~~~l~~~~~~hl~~l~~q~L~sk~l~-------~~w~~~l~~l~~~av~~v~pd~~-~~~~Di~~yVkIk  180 (1390)
                      ++.-|+...+|   +.+-..|+++++.|+|..++++       .+|.++++.++|+|+..++|+.+ ++.||+.+|||||
T Consensus       291 ~~~~ee~~~~m---~~~~~~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK  367 (1598)
T KOG0230|consen  291 DKSAEEDEKVM---RNVVESHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVK  367 (1598)
T ss_pred             ccchhhcchhh---hccccchHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEE
Confidence            34445555554   4555778999999999999886       38999999999999999999988 8899999999999


Q ss_pred             EecCCCCCcceeEEeEEEeeccCCCCCcceecCCcEEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcCCCE
Q psy18037        181 KVDGGTRNDSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGKLLSLEPVIMQETEYLRNVVARISALKPDI  260 (1390)
Q Consensus       181 kI~GG~~~DS~lI~GvV~~Kn~ahk~M~~~i~nprIlLL~~~Ley~r~e~k~~sle~ii~qE~eyL~~~V~rI~~~~pnV  260 (1390)
                      ||+||++.||++|+||||+|+++||.|++++++|||+|+.|+|||+|..++|.|++++++||.+||+.+|+||...+|||
T Consensus       368 ~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~v  447 (1598)
T KOG0230|consen  368 CVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDV  447 (1598)
T ss_pred             EecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccccceEEEEEEec---CCcEEEEEe
Q psy18037        261 VLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTCSRFSVKKLSD---SNKTLMFFE  337 (1390)
Q Consensus       261 Vlv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~c~~f~v~~~~~---~~kt~i~fe  337 (1390)
                      ++|+|+|+++||++|...||+++.|||++.|+||||||||+|++|+| .++.++||+|+.|+++++.+   ..||+|||+
T Consensus       448 llVeksVS~~aqe~L~~k~I~lvlnvK~s~leRIsR~tga~I~~siD-slt~~klg~C~~F~v~~~~e~hk~sKTlmffe  526 (1598)
T KOG0230|consen  448 LLVEKSVSRIAQELLLDKGISLVLNVKRSLLERISRCTGADIVPSVD-SLTSQKLGYCELFRVENYVEEHKPSKTLMFFE  526 (1598)
T ss_pred             EEEechHHHHHHHHhhccCeEEEEeccHHHHHHHHHHhcCceecchh-hhhccccCCCccHhhhhhhhcccchhhhHHhh
Confidence            99999999999999999999999999999999999999999999999 59999999999999999975   389999999


Q ss_pred             cCCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCccCCCCCCccccCCCCCCcccc
Q psy18037        338 GCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKLESSLLMDEQAYVIQTKKPILQSPSDSVADIIPKPSTDEKH  417 (1390)
Q Consensus       338 gc~~~~~g~TIlLRG~s~~~L~evKr~l~dal~vv~n~~LE~s~~ld~~a~~~~g~~~~~~~~~~s~~~~~~~~~~~~~~  417 (1390)
                      ||+ +++||||||||++...|.+||++++++++++||+.||.||+.|++|.....+..   .+    ....+ .      
T Consensus       527 gc~-~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~---~~----~~~~~-~------  591 (1598)
T KOG0230|consen  527 GCP-KPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLS---IP----TSVET-S------  591 (1598)
T ss_pred             cCC-CCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcccccccc---cc----ceecc-c------
Confidence            999 799999999999999999999999999999999999999999999987322211   00    00000 0      


Q ss_pred             ccCCCCCCCcccccccCCCccccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHhhhcceeecccCCccCCCCccc
Q psy18037        418 TRSNSESTGDVKVAIQKPASQSIQDASDPLQSEPNVTSPMSPQDLHLAVDNVPTNSFRKALDDIILSVSPTIKYTVPYLE  497 (1390)
Q Consensus       418 ~~s~~~~~~~~~~~~~~~~~~~~~~~~dpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLS~SP~v~f~~P~ll  497 (1390)
                                              .+..+++..++...+....+.-..+...+ ..|...+..++|++||++.|++|-+.
T Consensus       592 ------------------------~~~~~~s~~~~~t~st~~~a~~~~~~~e~-~~~~~~~~~~~ls~sp~~~~~~~~~~  646 (1598)
T KOG0230|consen  592 ------------------------IINRSISTSPGETDSTAEKAPVEALQVEP-NRFNGALSSELLSSSPFLEFPLDLLE  646 (1598)
T ss_pred             ------------------------ccccccccCCCCCcchhcccchhhhccch-hhhhcccccceeecccccccCCCccc
Confidence                                    00111111111111100000000011111 12788889999999999999999333


Q ss_pred             cccCc---cccccccCCCccccccccCCCCcccccCCCCCCCccccccccCCccccccccccccchHhHHHHHHHHHhhC
Q psy18037        498 NETGK---KCDLRKYFPDNIYWSAQLDPAAPIVKNETPVETIPRHTLELKEPHAFLSEVLTETCDSAKVRSSLALYRAAG  574 (1390)
Q Consensus       498 ~~~g~---~~~lr~~~~~~~y~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ra~~  574 (1390)
                      ..-|+   .+.+-.+..+.                         +...+.|.|....  .....+......-+.+.+..+
T Consensus       647 i~P~~~~~e~~~~~~~~~~-------------------------~~~~lv~~~es~~--~~~~~s~~~~~~~l~e~~~~~  699 (1598)
T KOG0230|consen  647 IAPGELVIETRLSSYSKGP-------------------------KQNGLVPAHESVL--NDLHESTLSILSKLPETRSGT  699 (1598)
T ss_pred             cCCccceeecchhhhcCch-------------------------hhccccccccccc--cccccccccccccccchhccc
Confidence            32221   11111111000                         1112222222221  000000000111111111111


Q ss_pred             CcccC-C--CCCCCCCC-CC-CCCCCCC--CCCCCCCCCCCcceEEEEEEeecCCCCCCccCCceeeeeecCCCCCcchH
Q psy18037        575 GRLTP-S--SKKLSPPP-TV-APPAPVS--TKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLG  647 (1390)
Q Consensus       575 ~~~~~-~--~~~~~~~~-~~-~~~~~~~--~~~d~l~p~~HQ~I~VL~Ss~~~s~~~~~pC~~P~lv~i~fYg~nD~tLG  647 (1390)
                      +.... .  .+...... +. .-.++|+  ...+.++|.+||+|+||||+++..  ...+|++|||++|+|||.+|++||
T Consensus       700 ~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~s~~~~~~~~HQsilVl~ss~~~~--k~~~C~r~~l~~ikyy~~~D~~lg  777 (1598)
T KOG0230|consen  700 HEGNEDKGPGLEPELANNQNIQRPEETEEQSSKDALDPSSHQSILVLFSSRSVL--KGSVCERPHLLRIKYYGSFDKPLG  777 (1598)
T ss_pred             chhccccCccccccccccccccchhhhhhhhcccCCCccccceeEEEEeeeeec--cCCccccccEEEEEeeccccchHh
Confidence            11000 0  00000000 00 0012222  457889999999999999997332  124499999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCCCCCchhcccceeeeCCeEEEEEEeecCCCCCCCCCCcEEEEeeCCCCC---CCCCceecccc
Q psy18037        648 SFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCK---QVSSILPMSSD  724 (1390)
Q Consensus       648 ~FLe~~cf~~~~~C~s~~C~~pm~~H~r~yvH~~g~v~I~v~~~~~~~~p~~~~~IlmWs~C~~C~---~~Tp~v~mS~~  724 (1390)
                      +||+++||++.|.||+  |++||++|+|+||||+||++|.|++++...+++.++.||||+||.+|+   ..|++++||++
T Consensus       778 ~fL~~~~f~~~~~C~s--C~~~~laHv~~yvh~~g~l~I~v~~~~e~l~~e~~~kI~~w~~ClkC~~~~~sT~rv~~Sda  855 (1598)
T KOG0230|consen  778 RFLRDYLFDQRYMCPS--CNEPMLAHVRCYVHGNGSLTISVKKLPELLPGEQKGKIWMWSRCLKCNRFPPSTRRVVMSDA  855 (1598)
T ss_pred             HHHHHHHhcccccCcc--ccchHHHHHHHHhhccCceEEEeeccccccccccCceEEEEeccccCCCCCCCcceeEcchh
Confidence            9999999999999976  999999999999999999999999999852456889999999999999   67999999999


Q ss_pred             hhcccHHhHhhhhccCCCcccccCCCCCCccccceeeeeeCCEEEEEEEceeeeeEEecCCceeEecCCccchhhHHHHH
Q psy18037        725 TWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEV  804 (1390)
Q Consensus       725 tw~~SFgKfLEL~F~~~~~~~r~~~C~H~~~~dhvryF~~~~~va~F~y~~I~~~ev~~Pp~~i~~~~~~~~k~~~~~e~  804 (1390)
                      +|++||||||||+||+|++..|..+|+|++||||+|||||++|||+|+|++|++|+|.+||.++.|++  ....|+.+|+
T Consensus       856 aw~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~--~~~~~~~~e~  933 (1598)
T KOG0230|consen  856 AWGLSFGKFLELSFSNHATANRVASCGHSLHRDCLRFFGFGNMVACFRYSPIEVYEVDLPPSKLEFNH--IQQEWLQEEI  933 (1598)
T ss_pred             hHhhhHHHHHHhhhccccccccccCCcchhhhhhhhhcccCCceeeeeeccceeEEEeCChhhcccch--hhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999993  5677899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccc----cccchhhHHHHHHHHHHHHHHHHHhCCcchhcccccccccccccccchh
Q psy18037        805 KKWSLMGQEVFSIVLEKLHTNQTDATM----NTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSILHTNQTDA  880 (1390)
Q Consensus       805 ~~~~~k~~~~f~sv~~rL~~l~~d~~~----~~~~~~l~~e~~e~k~kieei~~~L~s~~~~~~~w~~~~~~~~~~~~~~  880 (1390)
                      +++..||+.+|+.|.+||.+++.+...    ..++.++++|+.+|++.++.+..+....                     
T Consensus       934 k~v~~k~~~~~n~v~~~l~~i~~~~~~~~~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~---------------------  992 (1598)
T KOG0230|consen  934 KEVIEKGEELYNEVLERLSRIAEKDENRPLIQELKELLKHEKKEFKQNLQPIFTLEVDD---------------------  992 (1598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccccchhhhhhhhhhhhHHHHHHhhhhhhhhcccc---------------------
Confidence            999999999999999999999987332    3455677788888887777554433210                     


Q ss_pred             hHhhhchhhhhhhhccchhhhhhhhccCCcccccccccchhhHHHHHHHHHHhhhcccccccccCCCCCCCCCCCCccCc
Q psy18037        881 TMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPKTKSTDSSKSLLTD  960 (1390)
Q Consensus       881 ~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~l~~~~~~w~~rl~~~~~~~~~~~~~s~~~~~  960 (1390)
                                                      .....++ ..++++||+|....+.|+.+++.+..+.+...+.-.  .+
T Consensus       993 --------------------------------~~~s~d~-l~l~~~rr~l~~~s~~w~~~l~s~~~~~k~~~~~~~--~~ 1037 (1598)
T KOG0230|consen  993 --------------------------------GQLSHDI-LALNRDRRALLASSYLWDERLISLSKSLKLESSKDT--KP 1037 (1598)
T ss_pred             --------------------------------CcchhhH-HHHHHHHHHHHhhhccccccchhhhhhhcccccccc--cc
Confidence                                            0001123 347899999999999999999987655541110000  00


Q ss_pred             ccCCCCCccCCCcccccCCCCcccccCCCCCCCccccccchhhhhhhccCCCCCCCCCCCcchHHhhhccccccCCCCCc
Q psy18037        961 IVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPV 1040 (1390)
Q Consensus       961 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~s~~lP~~~~~~pi~~~l~~~~~~~~~~~~~~~p~ 1040 (1390)
                      ....+.++..        .+..+..+...+.-+.+++    .+...+...+.+.+..+.+++.....   . .+....+.
T Consensus      1038 ~~~~~~~~~~--------~~r~p~~~k~~~~~~~~~~----~~s~~~~~~~~~lp~~~~s~~~d~~~---~-~~~~~~~~ 1101 (1598)
T KOG0230|consen 1038 KESETNSTAK--------RKRSPEPQKGVDEDSFLTD----SSSDVSSLEHLNLPLPEDSNSTDTGL---S-GPSEVLED 1101 (1598)
T ss_pred             ccccccCccc--------cccCchhhccccccccccc----cccccCccccccCCCCCcccccchhc---c-Cccccccc
Confidence            0000000000        0000000000000000000    00000000011111111111000000   0 00000000


Q ss_pred             ccCCCCccccccCCCCCCCCCccccCCCcccccCCCCCCCCCchhcCchhhHHHHHHhc----CCCCCCCCCcccccccc
Q psy18037       1041 VHSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQL----LPTNVPSLPISNSLVEA 1116 (1390)
Q Consensus      1041 ~~~~~~~~~~~~~~~~~~~~s~~~~~~s~~~~~~~~~~~~~~~~~~~k~~~lk~~Ls~f----~~~~~~~~~l~~p~~~~ 1116 (1390)
                      +                  .+...       ....+     .....++ ...++++.+.    |.+.... |++.|+ .+
T Consensus      1102 ~------------------~s~~~-------~~~~v-----~n~~s~~-~~~~~~~~~~l~~~~~g~r~~-~~~~P~-s~ 1148 (1598)
T KOG0230|consen 1102 N------------------ESIDE-------MLGSV-----RNTYSLA-NKVRKILKQILDSATIGNRAN-PKSSPF-SG 1148 (1598)
T ss_pred             c------------------cchhh-------ccccc-----ccccchh-hHHHHHHHHhccccccccccc-CCCCCC-ch
Confidence            0                  00000       00000     0001111 1222222222    2222222 344444 33


Q ss_pred             ccccc-------------------------------------ccc--------------------------------CC-
Q psy18037       1117 QQHHT-------------------------------------LAL--------------------------------GC- 1126 (1390)
Q Consensus      1117 ~eH~~-------------------------------------l~~--------------------------------g~- 1126 (1390)
                      ..|..                                     +..                                |. 
T Consensus      1149 ~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~~~e~~lns~~~~~~~~~~~k~~~s~~~s~~~~~~rLl~p~~~n 1228 (1598)
T KOG0230|consen 1149 QDHSTDLPLESNPIHVLEKELSSWIEDPLTNMYYREATKELSLNSQKNSAETKEPPKYPSSESESEPESSSRLLLPLGLN 1228 (1598)
T ss_pred             hhhccccccccCCccccccccHHHHhhhhhhHhHHHHHHHHHhhcchhhcccccCCcCcccccccccccccceeccccCC
Confidence            33322                                     100                                11 


Q ss_pred             CccEEeeCCCCchhhhhccCChhhHHHHHHHh-----hhc-------------------------------cccc--c--
Q psy18037       1127 SVPVVVYEQEPSSIISYALSSFDYQYKLEELK-----AAH-------------------------------EIET--N-- 1166 (1390)
Q Consensus      1127 ~~~v~v~e~epss~ia~~L~s~~y~~~~~~~~-----~~~-------------------------------~~~~--~-- 1166 (1390)
                      .+.|.||||||+|+|||||++.+|.....+-.     ..+                               ..+.  .  
T Consensus      1229 dl~vp~~edpp~s~ia~al~s~~~~~q~~~p~~sis~~~S~~~~~~s~~~e~~~~~~~sl~~s~l~~s~~~~~e~l~~~~ 1308 (1598)
T KOG0230|consen 1229 DLVVPVYEDPPPSLIAYALSSKERINQESSPGLSISFSLSNLQGRLSKISEFDDTKSESLDNSGLESSSYRRGENLQKSK 1308 (1598)
T ss_pred             cccCCcccCCCchhhhhhhcchhhccCCCCCCccccccccccccchhhhhhhhhhhhccccccccchhhhcchhhccccc
Confidence            24578999999999999999977655332110     000                               0111  1  


Q ss_pred             cCCCCcceeeecCCCcceEEEEccHHHHHHHHHhhCCCChhHHHhhhhhhhhhcccCCCCCCcccccCchHHHHhhhccc
Q psy18037       1167 ECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRL 1246 (1390)
Q Consensus      1167 ~~~~~h~~~~f~~~~~~~~~~~y~~~~F~~lR~~~~~~~~~~~~~Sl~r~~~~~~~~gksgs~f~~t~d~~~~~~e~~~~ 1246 (1390)
                      .....|++++|.+|..+|+|++|||++|++||+.||.                                           
T Consensus      1309 ~~~~~h~~~~f~egk~k~svk~~yAe~F~~LR~~c~~------------------------------------------- 1345 (1598)
T KOG0230|consen 1309 LETRTHLEYQFSEGKAKYSVKCYYAEQFRALRKICCP------------------------------------------- 1345 (1598)
T ss_pred             cccccceeeeccCCceEEEEEEEehhhHHHHHHhhCc-------------------------------------------
Confidence            2566899999999999999999999999999999975                                           


Q ss_pred             ccChHHHHHHhhhcccccccCCCCCCceeeecCCceEEeccCHHHHHHHHHhhHHHHHHHhhhccCCCCceeeeeeeeEE
Q psy18037       1247 EKGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFAPNYYNYVKNCFENSSPTLLCKIFGVFR 1326 (1390)
Q Consensus      1247 ~~~~~~fi~SL~~~~~~~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~fl~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~ 1326 (1390)
                        ++++||+||+||++|.|+|||||++|+||.|+|||||+|++.|+++|++|||+||+||++++++..||+||||||+||
T Consensus      1346 --sEe~fIrSLsRc~~W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyq 1423 (1598)
T KOG0230|consen 1346 --SEEDFIRSLSRCVKWEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQ 1423 (1598)
T ss_pred             --hHHHHHHHHhcCcccccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEE
Confidence              689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccCC--CCceEEEEEEeccCCCCCceeEEEecCcccCCccCCCCCCCCCCCccccCCccccCC
Q psy18037       1327 VICQNNN--SKTRSNLLVMENLFHSRNIKLRFDLKGSLRNRLVDTSLDSMDSDAVNFGQNEEIYLP 1390 (1390)
Q Consensus      1327 i~~~~~~--~~~k~~~iVMeNlf~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~vllD~n~~~~~~ 1390 (1390)
                      |.+++..  +..|+++||||||||+++++|+||||||+|||++.++ ++.  ++|||||||+++++
T Consensus      1424 V~vK~~~sgke~K~DvmVMENLfY~r~vsRifDLKGS~RnR~v~~t-~~~--d~VLLDeNlVe~~~ 1486 (1598)
T KOG0230|consen 1424 VSVKSPKSGKETKMDVMVMENLFYGRKVSRIFDLKGSLRNRYVPTT-SGA--DEVLLDENLVEMMW 1486 (1598)
T ss_pred             EEEecCCCCceeEeeeeeehhhhhccccceeeeccchhhhccCCCC-CCC--ceEEecHHHHhhhh
Confidence            9999887  4589999999999999999999999999999999876 444  99999999999874

>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 Back     alignment and domain information
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit Back     alignment and domain information
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal Back     alignment and domain information
>KOG0364|consensus Back     alignment and domain information
>cd03343 cpn60 cpn60 chaperonin family Back     alignment and domain information
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit Back     alignment and domain information
>cd03333 chaperonin_like chaperonin_like superfamily Back     alignment and domain information
>smart00330 PIPKc Phosphatidylinositol phosphate kinases Back     alignment and domain information
>PTZ00212 T-complex protein 1 subunit beta; Provisional Back     alignment and domain information
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit Back     alignment and domain information
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit Back     alignment and domain information
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information
>KOG0361|consensus Back     alignment and domain information
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit Back     alignment and domain information
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit Back     alignment and domain information
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit Back     alignment and domain information
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit Back     alignment and domain information
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit Back     alignment and domain information
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit Back     alignment and domain information
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit Back     alignment and domain information
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit Back     alignment and domain information
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit Back     alignment and domain information
>KOG0358|consensus Back     alignment and domain information
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit Back     alignment and domain information
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit Back     alignment and domain information
>PLN03185 phosphatidylinositol phosphate kinase; Provisional Back     alignment and domain information
>KOG0229|consensus Back     alignment and domain information
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism Back     alignment and domain information
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II Back     alignment and domain information
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit Back     alignment and domain information
>KOG0363|consensus Back     alignment and domain information
>KOG0359|consensus Back     alignment and domain information
>KOG0360|consensus Back     alignment and domain information
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in [] Back     alignment and domain information
>KOG0362|consensus Back     alignment and domain information
>PRK12849 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>cd03344 GroEL GroEL_like type I chaperonin Back     alignment and domain information
>PRK00013 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PTZ00114 Heat shock protein 60; Provisional Back     alignment and domain information
>PRK12851 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>TIGR02348 GroEL chaperonin GroL Back     alignment and domain information
>PRK12850 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PRK12852 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>CHL00093 groEL chaperonin GroEL Back     alignment and domain information
>PLN03167 Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>PRK14104 chaperonin GroEL; Provisional Back     alignment and domain information
>KOG0357|consensus Back     alignment and domain information
>KOG0230|consensus Back     alignment and domain information
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information
>smart00330 PIPKc Phosphatidylinositol phosphate kinases Back     alignment and domain information
>cd04448 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins Back     alignment and domain information
>cd04441 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins Back     alignment and domain information
>cd04443 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins Back     alignment and domain information
>cd04442 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins Back     alignment and domain information
>cd04439 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins Back     alignment and domain information
>cd04449 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins Back     alignment and domain information
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins Back     alignment and domain information
>PLN03185 phosphatidylinositol phosphate kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1390
3iyg_G515 Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST 9e-21
3p9d_C590 The Crystal Structure Of Yeast Cct Reveals Intrinsi 1e-17
1a6d_A545 Thermosome From T. Acidophilum Length = 545 8e-15
1q3s_A548 Crystal Structure Of The Chaperonin From Thermococc 2e-13
1q2v_A548 Crystal Structure Of The Chaperonin From Thermococc 2e-13
1q3r_A548 Crystal Structure Of The Chaperonin From Thermococc 2e-13
3rus_A543 Crystal Structure Of Cpn-Rls In Complex With Adp Fr 2e-13
1gml_A178 Crystal Structure Of The Mouse Cct Gamma Apical Dom 2e-13
3izi_A513 Mm-Cpn Rls With Atp Length = 513 2e-13
3izh_A513 Mm-Cpn D386a With Atp Length = 513 6e-13
3los_A543 Atomic Model Of Mm-Cpn In The Closed State Length = 6e-13
3ko1_A553 Cystal Structure Of Thermosome From Acidianus Tengc 1e-12
1a6d_B543 Thermosome From T. Acidophilum Length = 543 3e-12
3aq1_B500 Open State Monomer Of A Group Ii Chaperonin From Me 4e-12
3izk_A491 Mm-Cpn Rls Deltalid With Atp Length = 491 7e-12
3j02_A491 Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun 2e-11
3iyf_A521 Atomic Model Of The Lidless Mm-Cpn In The Open Stat 2e-11
3izn_A491 Mm-Cpn Deltalid With Atp Length = 491 2e-11
1ass_A159 Apical Domain Of The Chaperonin From Thermoplasma A 3e-08
3iyg_D518 Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST 3e-08
2gk9_A 392 Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty 4e-07
3p9d_B527 The Crystal Structure Of Yeast Cct Reveals Intrinsi 2e-06
3p9d_G550 The Crystal Structure Of Yeast Cct Reveals Intrinsi 5e-05
>pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 Back     alignment and structure 
Iteration: 1

 Score = 99.8 bits (247), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 134/245 (54%), Gaps = 13/245 (5%)
Query: 147 WASVILPLAEKIIEEVKPDQNI-DSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK 205
           W+S+   +A   ++ V+ ++N     DI++Y +++K+ GG   DS V+ G++ +K+V+H 
Sbjct: 156 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 215
Query: 206 SMLTALNNPKILILQCAIVYQRVEGKL---LSLEP----VIMQETEYLRNVVARISALKP 258
            M   + NP+I++L  ++ Y++ E +    ++ E     ++  E EY++ +   I  LKP
Sbjct: 216 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 275
Query: 259 DIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGTC 318
           D+V+ ++ ++ LAQ  L +  IT +  V+ T   RIAR   A +V   + L  +  +GT 
Sbjct: 276 DVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREE-DVGTG 334
Query: 319 SR-FSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKRVTSFMIYVLYNWKL 377
           +    +KK+ D   T  F   C  P K  T++LRGAS++ L +V+R     + V  N  L
Sbjct: 335 AGLLEIKKIGDEYFT--FITECKDP-KACTILLRGASKEILSEVERNLQDAMQVCRNVLL 391
Query: 378 ESSLL 382
           +  L+
Sbjct: 392 DPQLV 396
>pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 590 Back     alignment and structure
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 Back     alignment and structure
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 Back     alignment and structure
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 Back     alignment and structure
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 Back     alignment and structure
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 Back     alignment and structure
>pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain (Triclinic) Length = 178 Back     alignment and structure
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 Back     alignment and structure
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 Back     alignment and structure
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 Back     alignment and structure
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 Back     alignment and structure
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 Back     alignment and structure
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 Back     alignment and structure
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 Back     alignment and structure
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 Back     alignment and structure
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 Back     alignment and structure
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 Back     alignment and structure
>pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma Acidophilum Length = 159 Back     alignment and structure
>pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 518 Back     alignment and structure
>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 Back     alignment and structure
>pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 527 Back     alignment and structure
>pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 550 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1390
3iyg_E515 T-complex protein 1 subunit; TRIC/CCT, asymmetric, 1e-32
3aq1_B500 Thermosome subunit; group II chaperonin, protein f 3e-32
1a6d_A545 Thermosome (alpha subunit); group II chaperonin, C 9e-32
3ruv_A543 Chaperonin, CPN; double-ring, protein folding mach 1e-31
1a6d_B543 Thermosome (beta subunit); group II chaperonin, CC 1e-31
1q3q_A548 Thermosome alpha subunit; chaperone, chaperonin; H 2e-31
3iyg_A529 T-complex protein 1 subunit alpha; TRIC/CCT, asymm 2e-31
3ko1_A553 Chaperonin; 9-fold symmetry, double ring, ATP hydr 2e-31
3p9d_B527 T-complex protein 1 subunit beta; HSP60, eukaryoti 4e-31
3iyg_G515 T-complex protein 1 subunit gamma; TRIC/CCT, asymm 4e-31
3p9d_E562 T-complex protein 1 subunit epsilon; HSP60, eukary 8e-31
3iyg_H515 T-complex protein 1 subunit ETA; TRIC/CCT, asymmet 1e-30
3iyg_Q512 T-complex protein 1 subunit theta; TRIC/CCT, asymm 1e-30
3p9d_A559 T-complex protein 1 subunit alpha; HSP60, eukaryot 2e-30
3iyg_D518 T-complex protein 1 subunit delta; TRIC/CCT, asymm 3e-30
3p9d_G550 T-complex protein 1 subunit ETA; HSP60, eukaryotic 5e-30
3iyg_B513 T-complex protein 1 subunit beta; TRIC/CCT, asymme 6e-30
3p9d_H568 T-complex protein 1 subunit theta; HSP60, eukaryot 7e-30
1gml_A178 T-complex protein 1 subunit gamma; chaperone, chap 1e-29
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 6e-28
3iyg_Z517 T-complex protein 1 subunit zeta; TRIC/CCT, asymme 7e-28
3p9d_C590 T-complex protein 1 subunit gamma; HSP60, eukaryot 1e-27
3p9d_F546 T-complex protein 1 subunit zeta; HSP60, eukaryoti 4e-27
3p9d_D528 T-complex protein 1 subunit delta; HSP60, eukaryot 4e-27
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 3e-26
1ass_A159 Thermosome; chaperonin, HSP60, TCP1, groel, thermo 2e-23
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-16
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
 Score =  133 bits (337), Expect = 1e-32
 Identities = 48/288 (16%), Positives = 98/288 (34%), Gaps = 35/288 (12%)

Query: 96  VHSLQKIIQAYRRDPIRPNNAKADA-------ALTDKFESHRNKLLQQLLIVESLSMS-- 146
           +H   +I   Y +       A   A       + +   +    + L Q    ++ ++   
Sbjct: 106 IHP-IRIADGYEQ-------AARIAIEHLDKISDSVLVDMKNTEPLIQ--TAKT-TLGSK 154

Query: 147 ----WASVILPLAEKIIEEVKPDQNIDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNV 202
                   +  +A   +  V  D      D    ++++   GG   D+ ++ G++  K+ 
Sbjct: 155 VVNSCHRQMAEIAVNAVLTVA-DMQRRDVDFE-LIKVEGKVGGRLEDTKLIKGVIVDKDF 212

Query: 203 SHKSMLTALNNPKILILQCAIVYQRVE-------GKLLSLEPVIMQETEYLRNVVARISA 255
           SH  M   + + KI IL C     + +         +   + +   E E    ++ +I  
Sbjct: 213 SHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKE 272

Query: 256 LKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHL 315
              ++ + Q      A   L Q  +  V  V    +E IA  T   +V      L    L
Sbjct: 273 TGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFS-ELTAEKL 331

Query: 316 GTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKELMKVKR 363
           G            +   ++  E C    +  T+ +RG ++  + + KR
Sbjct: 332 GFAGLVKEISFGTTKDKMLVIEQCKNS-RAVTIFIRGGNKMIIEEAKR 378
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 Back     alignment and structure
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 Back     alignment and structure
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 Back     alignment and structure
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 Back     alignment and structure
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 Back     alignment and structure
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 Back     alignment and structure
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 Back     alignment and structure
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 Back     alignment and structure
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 Back     alignment and structure
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 Back     alignment and structure
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 Back     alignment and structure
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 Back     alignment and structure
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 Back     alignment and structure
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 Back     alignment and structure
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 Back     alignment and structure
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Length = 178 Back     alignment and structure
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 Back     alignment and structure
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 Back     alignment and structure
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 Back     alignment and structure
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 Back     alignment and structure
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 Back     alignment and structure
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 Back     alignment and structure
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Length = 159 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1390
3iyg_G515 T-complex protein 1 subunit gamma; TRIC/CCT, asymm 100.0
3iyg_A529 T-complex protein 1 subunit alpha; TRIC/CCT, asymm 100.0
1a6d_B543 Thermosome (beta subunit); group II chaperonin, CC 100.0
3aq1_B500 Thermosome subunit; group II chaperonin, protein f 100.0
3iyg_Z517 T-complex protein 1 subunit zeta; TRIC/CCT, asymme 100.0
1q3q_A548 Thermosome alpha subunit; chaperone, chaperonin; H 100.0
3ruv_A543 Chaperonin, CPN; double-ring, protein folding mach 100.0
3iyg_H515 T-complex protein 1 subunit ETA; TRIC/CCT, asymmet 100.0
3iyg_E515 T-complex protein 1 subunit; TRIC/CCT, asymmetric, 100.0
1a6d_A545 Thermosome (alpha subunit); group II chaperonin, C 100.0
3ko1_A553 Chaperonin; 9-fold symmetry, double ring, ATP hydr 100.0
3iyg_B513 T-complex protein 1 subunit beta; TRIC/CCT, asymme 100.0
3p9d_C590 T-complex protein 1 subunit gamma; HSP60, eukaryot 100.0
3iyg_D518 T-complex protein 1 subunit delta; TRIC/CCT, asymm 100.0
3p9d_G550 T-complex protein 1 subunit ETA; HSP60, eukaryotic 100.0
3p9d_E562 T-complex protein 1 subunit epsilon; HSP60, eukary 100.0
3p9d_F546 T-complex protein 1 subunit zeta; HSP60, eukaryoti 100.0
3iyg_Q512 T-complex protein 1 subunit theta; TRIC/CCT, asymm 100.0
3p9d_H568 T-complex protein 1 subunit theta; HSP60, eukaryot 100.0
3p9d_A559 T-complex protein 1 subunit alpha; HSP60, eukaryot 100.0
1gml_A178 T-complex protein 1 subunit gamma; chaperone, chap 100.0
3p9d_D528 T-complex protein 1 subunit delta; HSP60, eukaryot 100.0
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 100.0
3p9d_B527 T-complex protein 1 subunit beta; HSP60, eukaryoti 100.0
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 100.0
1ass_A159 Thermosome; chaperonin, HSP60, TCP1, groel, thermo 99.98
1kp8_A547 Groel protein; chaperonin, assisted protein foldin 99.92
1we3_A543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 99.92
1iok_A545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 99.91
3rtk_A546 60 kDa chaperonin 2; heat shock protein, chaperone 99.89
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 94.89
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 93.99
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 92.62
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 92.41
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 90.59
2aqx_A 289 Predicted: inositol 1,4,5-trisphosphate 3-kinase; 88.53
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
Probab=100.00  E-value=2.4e-42  Score=423.25  Aligned_cols=264  Identities=26%  Similarity=0.460  Sum_probs=248.3

Q ss_pred             HHHHHHHHHHHhhcccCChhHHHHHHHHHHHHHHHhCCCCC-CCCCCcccceEEEEecCCCCCcceeEEeEEEeeccCCC
Q psy18037        127 ESHRNKLLQQLLIVESLSMSWASVILPLAEKIIEEVKPDQN-IDSFDIRQYVQIKKVDGGTRNDSFVVSGIVHSKNVSHK  205 (1390)
Q Consensus       127 ~~hl~~l~~q~L~sk~l~~~w~~~l~~l~~~av~~v~pd~~-~~~~Di~~yVkIkkI~GG~~~DS~lI~GvV~~Kn~ahk  205 (1390)
                      ++.+.++++++|.+|.+. .|.+.+++++++|+..|.++.+ ..++|+++||+|+|++||++.||++|+|++|+|.+.|+
T Consensus       137 ~~~l~~va~tsl~sK~i~-~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~  215 (515)
T 3iyg_G          137 RDTMLNIINSSITTKVIS-RWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP  215 (515)
T ss_pred             HHHHHHHHHHHhcCCchh-hHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCC
Confidence            578899999999999997 9999999999999999985533 34589988999999999999999999999999999999


Q ss_pred             CCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCccHHHHHHHHHc
Q psy18037        206 SMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQL  278 (1390)
Q Consensus       206 ~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVVlv~k~Vs~~A~~~L~~~  278 (1390)
                      +||++++||||+|++|||||++++.+       ..++++++++|++|++++|++|++.||+|||++++|+++|++||.++
T Consensus       216 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~  295 (515)
T 3iyg_G          216 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA  295 (515)
T ss_pred             CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC
Confidence            99999999999999999999998863       34588999999999999999999999999999999999999999999


Q ss_pred             CCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccc-cceEEEEEEecCCcEEEEEecCCCCCCeEEEEEecCCHHH
Q psy18037        279 GITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGT-CSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRGASRKE  357 (1390)
Q Consensus       279 GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~-c~~f~v~~~~~~~kt~i~fegc~~~~~g~TIlLRG~s~~~  357 (1390)
                      ||++++++++.+|+|||++|||.|+++++ .+++..||+ |+.|+++++  ++++|+||+||+ ...+|||+|||+|+.+
T Consensus       296 ~I~av~~~~k~~leria~~tGa~ii~~l~-~l~~~~LG~~a~~v~~~~~--g~~~~~~i~g~~-~~~~~TIllrG~t~~~  371 (515)
T 3iyg_G          296 NITAIRRVRKTDNNRIARACGARIVSRPE-ELREEDVGTGAGLLEIKKI--GDEYFTFITECK-DPKACTILLRGASKEI  371 (515)
T ss_pred             CceeeccCCHHHHHHHHHHhCCeeecccc-ccChhhcCCcccEEEEEEE--CCceEEEEeCCC-CCCeEEEEEcCCCHHH
Confidence            99999999999999999999999999999 799999999 999999999  899999999999 5789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccCCCC
Q psy18037        358 LMKVKRVTSFMIYVLYN-------------WKLESSLLMDEQAYVIQTKKP  395 (1390)
Q Consensus       358 L~evKr~l~dal~vv~n-------------~~LE~s~~ld~~a~~~~g~~~  395 (1390)
                      |+|+||+++||++++++             .+++++..+++++..++|+++
T Consensus       372 l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq  422 (515)
T 3iyg_G          372 LSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ  422 (515)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH
Confidence            99999999999999998             699999999999988888776
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Back     alignment and structure
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Back     alignment and structure
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Back     alignment and structure
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Back     alignment and structure
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Back     alignment and structure
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Back     alignment and structure
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Back     alignment and structure
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B Back     alignment and structure
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g* Back     alignment and structure
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e* Back     alignment and structure
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f* Back     alignment and structure
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h* Back     alignment and structure
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a* Back     alignment and structure
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Back     alignment and structure
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d* Back     alignment and structure
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Back     alignment and structure
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b* Back     alignment and structure
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Back     alignment and structure
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Back     alignment and structure
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Back     alignment and structure
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Back     alignment and structure
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Back     alignment and structure
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Back     alignment and structure
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1390
d1gmla_168 c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musc 6e-32
d1bo1a_ 383 d.143.1.2 (A:) Phosphatidylinositol phosphate kina 1e-27
d1q3qa2153 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon 2e-27
d1a6db2152 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon 9e-26
d1assa_152 c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermo 6e-25
d1q3qa3107 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domai 4e-09
d1a6da3105 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domai 7e-06
d1a6db3107 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domai 0.001
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Length = 168 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: GroEL apical domain-like
family: Group II chaperonin (CCT, TRIC), apical domain
domain: Thermosome, A-domain
species: Mouse (Mus musculus), gamma chain [TaxId: 10090]

 Score =  120 bits (302), Expect = 6e-32
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 10/171 (5%)

Query: 189 DSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVE-------GKLLSLEPVIMQ 241
           DS V+ G++ +K+V+H  M   + NP+I++L  ++ Y++ E        +      ++  
Sbjct: 1   DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQM 60

Query: 242 ETEYLRNVVARISALKPDIVLVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRAD 301
           E EY+  +   I  LKPD+V+ ++ ++ LAQ  L +  +T +  V+ T   RIAR   A 
Sbjct: 61  EEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGAR 120

Query: 302 LVYSVDVLLNQIHLGTCSRFSVKKLSDSNKTLMFFEGCAFPHKGSTVILRG 352
           +V   + L             +KK+ D  +   F   C  P K  T++LRG
Sbjct: 121 IVSRPEELREDDVGTGAGLLEIKKIGD--EYFTFITDCKDP-KACTILLRG 168
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 153 Back     information, alignment and structure
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 152 Back     information, alignment and structure
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 152 Back     information, alignment and structure
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 107 Back     information, alignment and structure
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 105 Back     information, alignment and structure
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 107 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1390
d1gmla_168 Thermosome, A-domain {Mouse (Mus musculus), gamma 100.0
d1bo1a_ 383 Phosphatidylinositol phosphate kinase IIbeta, PIPK 100.0
d1q3qa2153 Thermosome, A-domain {Archaeon Thermococcus sp. ks 99.97
d1a6db2152 Thermosome, A-domain {Archaeon Thermoplasma acidop 99.97
d1assa_152 Thermosome, A-domain {Archaeon Thermoplasma acidop 99.97
d1q3qa3107 Thermosome, I domain {Archaeon Thermococcus sp. ks 99.45
d1a6da3105 Thermosome, I domain {Archaeon Thermoplasma acidop 99.36
d1a6db3107 Thermosome, I domain {Archaeon Thermoplasma acidop 99.35
d1sjpa2184 GroEL, A domain {Mycobacterium tuberculosis, GroEL 96.4
d1kida_193 GroEL, A domain {Escherichia coli [TaxId: 562]} 96.26
d1srva_145 GroEL, A domain {Thermus thermophilus [TaxId: 274] 96.0
d1ioka2176 GroEL, A domain {Paracoccus denitrificans [TaxId: 95.82
d1bo1a_ 383 Phosphatidylinositol phosphate kinase IIbeta, PIPK 91.98
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: GroEL apical domain-like
family: Group II chaperonin (CCT, TRIC), apical domain
domain: Thermosome, A-domain
species: Mouse (Mus musculus), gamma chain [TaxId: 10090]

Probab=100.00  E-value=1.1e-34  Score=304.18  Aligned_cols=160  Identities=30%  Similarity=0.538  Sum_probs=148.5

Q ss_pred             cceeEEeEEEeeccCCCCCcceecCCcEEEEEeeeeccccccc-------ccchHHHHHHHHHHHHHHHHHHHhcCCCEE
Q psy18037        189 DSFVVSGIVHSKNVSHKSMLTALNNPKILILQCAIVYQRVEGK-------LLSLEPVIMQETEYLRNVVARISALKPDIV  261 (1390)
Q Consensus       189 DS~lI~GvV~~Kn~ahk~M~~~i~nprIlLL~~~Ley~r~e~k-------~~sle~ii~qE~eyL~~~V~rI~~~~pnVV  261 (1390)
                      ||++|+|+||+|+++|++||+.++||||||++|+|+|++.+.+       ..+++.++++|++|+.++|++|+++|||||
T Consensus         1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vv   80 (168)
T d1gmla_           1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVV   80 (168)
T ss_dssp             CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEEEEEecccCCcCCccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            8999999999999999999999999999999999999998763       347999999999999999999999999999


Q ss_pred             EecCCccHHHHHHHHHcCCEEEEccChhHHHHHHHHhCCeEeeecccccCCccccc-cceEEEEEEecCCcEEEEEecCC
Q psy18037        262 LVQRNVARLAQESLQQLGITLVLNVKTTVLERIARCTRADLVYSVDVLLNQIHLGT-CSRFSVKKLSDSNKTLMFFEGCA  340 (1390)
Q Consensus       262 lv~k~Vs~~A~~~L~~~GI~vv~nVK~~~LeRIAr~TgA~Ii~Sid~~l~~~~LG~-c~~f~v~~~~~~~kt~i~fegc~  340 (1390)
                      ||+|+|++.|++||.++||++++||++++|+||||||||+|+++++ .+++++||+ |+.++++.+  ++++|++|+||+
T Consensus        81 ~~~~~I~~~a~~~L~~~gI~~~~rv~~~dl~ria~~tga~iv~si~-~l~~~~lG~~~~~~~~~~~--~~~~~~~~~~~~  157 (168)
T d1gmla_          81 ITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPE-ELREDDVGTGAGLLEIKKI--GDEYFTFITDCK  157 (168)
T ss_dssp             EESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGG-GCCGGGSBCCEEEEEEEEE--TTEEEEEEEEES
T ss_pred             EEcCCCCHHHHHHHHHCCCeeeccCCHHHHHHHHHHHCCceeCchh-hcCcccccccccEEEEEEE--CCeEEEEEEecC
Confidence            9999999999999999999999999999999999999999999999 799999998 688888888  999999999999


Q ss_pred             CCCCeEEEEEec
Q psy18037        341 FPHKGSTVILRG  352 (1390)
Q Consensus       341 ~~~~g~TIlLRG  352 (1390)
                       ...+|||||||
T Consensus       158 -~~~~~TIllRG  168 (168)
T d1gmla_         158 -DPKACTILLRG  168 (168)
T ss_dssp             -STTSCEEEEEC
T ss_pred             -CCCEEEEEEeC
Confidence             57899999999
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Back     information, alignment and structure
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Back     information, alignment and structure
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Back     information, alignment and structure
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Back     information, alignment and structure
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Back     information, alignment and structure
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure