Psyllid ID: psy18040


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--
MESAKSLVEQASMKTRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCGK
cccccccEEccHHHHHHHHHccccccccEEEEcccHHHHHccccccccccccccccccccccccccEEEEEEcccccccccc
cccHHHHHHHcHHHHHHHHHcccccccccEEccccHHHHHcccccccccccccccccEEccccccccEEEEEcccccccccc
MESAKSLVEQASmktrkgessilprcnfpalaCESYEKYlegncfnctdptkcgnmgyyadkstgrgtLYLLtrdeepfcgk
mesakslveqasmktrkgessilprcnFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTrdeepfcgk
MESAKSLVEQASMKTRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCGK
*********************ILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLT*********
***AKSL*EQASMKTRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCG*
*********************ILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCGK
****KSLVEQASMKTRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCG*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESAKSLVEQASMKTRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFCGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query82 2.2.26 [Sep-21-2011]
P54318 468 Pancreatic lipase-related yes N/A 0.719 0.126 0.4 0.0004
Q5XGE9 460 Lipase member H OS=Xenopu yes N/A 0.743 0.132 0.309 0.0005
Q6PA23 460 Lipase member H-A OS=Xeno N/A N/A 0.743 0.132 0.338 0.0007
>sp|P54318|LIPR2_RAT Pancreatic lipase-related protein 2 OS=Rattus norvegicus GN=Pnliprp2 PE=1 SV=1 Back     alignment and function desciption
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 20  SSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRG-----TLYLLTR 74
           SSIL    F    C SYEK+ + +CF C +   C  MG+YAD+  G+      T+YL T 
Sbjct: 290 SSILNPDGFLGYPCSSYEKFQQNDCFPCPE-EGCPKMGHYADQFEGKTATVEQTVYLNTG 348

Query: 75  DEEPF 79
           D   F
Sbjct: 349 DSGNF 353




Lipase with broad substrate specificity. Can hydrolyze both phospholipids and galactolipids. Shows a preference for 1,2-didodecanoylphosphatidylethanolamine and 1,2-didodecanoylphosphatidylglycerol, and has low activity towards 1,2-didodecanoylphosphatidylcholine (in vitro).
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 3
>sp|Q5XGE9|LIPH_XENTR Lipase member H OS=Xenopus tropicalis GN=liph PE=2 SV=1 Back     alignment and function description
>sp|Q6PA23|LIPHA_XENLA Lipase member H-A OS=Xenopus laevis GN=liph-a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query82
193605967 877 PREDICTED: hypothetical protein LOC10015 0.743 0.069 0.704 1e-21
270013516 924 hypothetical protein TcasGA2_TC012121 [T 0.743 0.066 0.704 1e-20
321469989 428 hypothetical protein DAPPUDRAFT_50682 [D 0.756 0.144 0.677 3e-19
242004815 935 Pancreatic triacylglycerol lipase precur 0.743 0.065 0.655 5e-19
189240829 926 PREDICTED: similar to CG6847 CG6847-PA [ 0.743 0.065 0.623 1e-18
357623021 912 hypothetical protein KGM_03143 [Danaus p 0.743 0.066 0.606 1e-18
195040161 991 GH12446 [Drosophila grimshawi] gi|193900 0.756 0.062 0.585 5e-17
194768130 1024 GF19363 [Drosophila ananassae] gi|190623 0.743 0.059 0.579 7e-17
195396779 979 GJ16583 [Drosophila virilis] gi|19414677 0.743 0.062 0.565 1e-16
195457126 927 GK15147 [Drosophila willistoni] gi|19417 0.756 0.066 0.571 1e-16
>gi|193605967|ref|XP_001944556.1| PREDICTED: hypothetical protein LOC100158740 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 50/61 (81%)

Query: 21  SILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRDEEPFC 80
           S+ P C FPA+ CESYEK+LEG CF C D +KCGNMGY++DKS GRG +YLLTRDEEPFC
Sbjct: 352 SVSPSCAFPAVPCESYEKFLEGECFPCKDKSKCGNMGYHSDKSPGRGKMYLLTRDEEPFC 411

Query: 81  G 81
            
Sbjct: 412 A 412




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013516|gb|EFA09964.1| hypothetical protein TcasGA2_TC012121 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|321469989|gb|EFX80967.1| hypothetical protein DAPPUDRAFT_50682 [Daphnia pulex] Back     alignment and taxonomy information
>gi|242004815|ref|XP_002423272.1| Pancreatic triacylglycerol lipase precursor, putative [Pediculus humanus corporis] gi|212506274|gb|EEB10534.1| Pancreatic triacylglycerol lipase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|189240829|ref|XP_001812059.1| PREDICTED: similar to CG6847 CG6847-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357623021|gb|EHJ74339.1| hypothetical protein KGM_03143 [Danaus plexippus] Back     alignment and taxonomy information
>gi|195040161|ref|XP_001991014.1| GH12446 [Drosophila grimshawi] gi|193900772|gb|EDV99638.1| GH12446 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|194768130|ref|XP_001966166.1| GF19363 [Drosophila ananassae] gi|190623051|gb|EDV38575.1| GF19363 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195396779|ref|XP_002057006.1| GJ16583 [Drosophila virilis] gi|194146773|gb|EDW62492.1| GJ16583 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195457126|ref|XP_002075437.1| GK15147 [Drosophila willistoni] gi|194171522|gb|EDW86423.1| GK15147 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query82
FB|FBgn0030884 1000 CG6847 [Drosophila melanogaste 0.731 0.06 0.558 6.9e-16
UNIPROTKB|F1P2G7 436 LIPH "Uncharacterized protein" 0.743 0.139 0.408 2.4e-06
UNIPROTKB|F1ND96432 LIPI "Uncharacterized protein" 0.743 0.141 0.371 8.4e-06
UNIPROTKB|F1PG57 451 LIPH "Uncharacterized protein" 0.743 0.135 0.338 4e-05
RGD|620793 468 Pnliprp2 "pancreatic lipase-re 0.719 0.126 0.4 6.9e-05
UNIPROTKB|A2IBA6 417 LIPH "Lipase member H" [Homo s 0.743 0.146 0.366 7.5e-05
UNIPROTKB|Q8WWY8 451 LIPH "Lipase member H" [Homo s 0.743 0.135 0.366 8.4e-05
UNIPROTKB|F1MXA8 454 LIPH "Uncharacterized protein" 0.719 0.129 0.356 8.5e-05
UNIPROTKB|F1SFK2371 LIPH "Uncharacterized protein" 0.743 0.164 0.338 0.0001
UNIPROTKB|E9PRT6 467 PNLIPRP1 "Inactive pancreatic 0.548 0.096 0.456 0.00039
FB|FBgn0030884 CG6847 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 211 (79.3 bits), Expect = 6.9e-16, P = 6.9e-16
 Identities = 38/68 (55%), Positives = 47/68 (69%)

Query:    21 SILPRCNFPALACESYEKYLEGNCFNCTDPT--------KCGNMGYYADKSTGRGTLYLL 72
             S+ PRC FPA  C +Y+ +L+G CF C            +CGN+GYYAD+STGRG LYLL
Sbjct:   397 SVAPRCLFPAFPCGNYDDFLKGRCFPCAQDDEDLAEGVPRCGNIGYYADRSTGRGQLYLL 456

Query:    73 TRDEEPFC 80
             TR+EEPFC
Sbjct:   457 TREEEPFC 464




GO:0004806 "triglyceride lipase activity" evidence=ISS
GO:0006629 "lipid metabolic process" evidence=IEA
UNIPROTKB|F1P2G7 LIPH "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1ND96 LIPI "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PG57 LIPH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|620793 Pnliprp2 "pancreatic lipase-related protein 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A2IBA6 LIPH "Lipase member H" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WWY8 LIPH "Lipase member H" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXA8 LIPH "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFK2 LIPH "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E9PRT6 PNLIPRP1 "Inactive pancreatic lipase-related protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
cd00707275 cd00707, Pancreat_lipase_like, Pancreatic lipase-l 3e-16
pfam00151329 pfam00151, Lipase, Lipase 3e-15
>gnl|CDD|238363 cd00707, Pancreat_lipase_like, Pancreatic lipase-like enzymes Back     alignment and domain information
 Score = 70.0 bits (172), Expect = 3e-16
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 20  SSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRGTLYLLTRD 75
            SIL  C F A  C SY+++L G CF C   + C  MGY+AD+    G  YL T  
Sbjct: 222 ESILSPCGFVAYPCSSYDEFLAGKCFPC--GSGCVRMGYHADRFRREGKFYLKTNA 275


Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. Length = 275

>gnl|CDD|215752 pfam00151, Lipase, Lipase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 82
TIGR03230 442 lipo_lipase lipoprotein lipase. Members of this pr 99.9
PF00151331 Lipase: Lipase; InterPro: IPR013818 Triglyceride l 99.88
cd00707275 Pancreat_lipase_like Pancreatic lipase-like enzyme 99.79
>TIGR03230 lipo_lipase lipoprotein lipase Back     alignment and domain information
Probab=99.90  E-value=2.2e-24  Score=154.45  Aligned_cols=78  Identities=26%  Similarity=0.462  Sum_probs=69.4

Q ss_pred             ccCCceeecccc-HHHHHhhcCCC-CCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC--CceeEEEecCCCCC
Q psy18040          3 SAKSLVEQASMK-TRKGESSILPR-CNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST--GRGTLYLLTRDEEP   78 (82)
Q Consensus         3 ~~~~~~~CsH~R-~~yf~ESI~~~-~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~--~~G~~yl~T~~~~P   78 (82)
                      ++.+.+.|||.| ++||+|||.++ ++|+|++|++|++|+.|.|.+|.. +.|+.|||++++.+  .+|+|||.|++++|
T Consensus       227 ~~~~~~~CsH~Ra~~~f~eSi~~~~~~f~a~~C~s~~~f~~g~C~~c~~-~~c~~mG~~~~~~~~~~~g~~yl~T~~~~P  305 (442)
T TIGR03230       227 NMDQLVKCSHERSIHLFIDSLLNEENPSMAYRCSSKEAFNKGLCLSCRK-NRCNKLGYEINKVRTKRSSKMYLKTREMMP  305 (442)
T ss_pred             ccCcCccchhHHHHHHHHHHhcccCCCeeeEECCCHHHHhcCCCCCCCC-CCCceeCccccccccCCceEEEEEeCCCCC
Confidence            345678999999 99999999764 899999999999999999999975 57999999999753  47999999999999


Q ss_pred             CCC
Q psy18040         79 FCG   81 (82)
Q Consensus        79 f~~   81 (82)
                      ||+
T Consensus       306 f~~  308 (442)
T TIGR03230       306 YKV  308 (442)
T ss_pred             ceE
Confidence            986



Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 Back     alignment and domain information
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
1bu8_A 452 Rat Pancreatic Lipase Related Protein 2 Length = 45 4e-05
>pdb|1BU8|A Chain A, Rat Pancreatic Lipase Related Protein 2 Length = 452 Back     alignment and structure

Iteration: 1

Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 20 SSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTGRG-----TLYLLTR 74 SSIL F C SYEK+ + +CF C + C MG+YAD+ G+ T+YL T Sbjct: 274 SSILNPDGFLGYPCSSYEKFQQNDCFPCPE-EGCPKMGHYADQFEGKTATVEQTVYLNTG 332 Query: 75 DEEPF 79 D F Sbjct: 333 DSGNF 337

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
1gpl_A 432 RP2 lipase; serine esterase, hydrolase, lipid degr 2e-17
1w52_X 452 Pancreatic lipase related protein 2; detergent, cl 6e-17
1bu8_A 452 Protein (pancreatic lipase related protein 2); hyd 2e-16
1hpl_A 449 Lipase; hydrolase(carboxylic esterase); 2.30A {Equ 4e-16
1rp1_A 450 Pancreatic lipase related protein 1; hydrolase, li 9e-15
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A Length = 432 Back     alignment and structure
 Score = 73.9 bits (181), Expect = 2e-17
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 20  SSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTG-----RGTLYLLTR 74
           SSIL    F    C SY+++ E  CF C     C  MG++AD+  G       T +L T 
Sbjct: 256 SSILNPEGFLGYPCASYDEFQESGCFPCPA-KGCPKMGHFADQYPGKTNAVEQTFFLNTG 314

Query: 75  DEEPFC 80
             + F 
Sbjct: 315 ASDNFT 320


>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} Length = 452 Back     alignment and structure
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* Length = 452 Back     alignment and structure
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 Length = 449 Back     alignment and structure
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A Length = 450 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query82
1hpl_A 449 Lipase; hydrolase(carboxylic esterase); 2.30A {Equ 99.89
1rp1_A 450 Pancreatic lipase related protein 1; hydrolase, li 99.88
1bu8_A 452 Protein (pancreatic lipase related protein 2); hyd 99.88
1w52_X 452 Pancreatic lipase related protein 2; detergent, cl 99.87
1gpl_A 432 RP2 lipase; serine esterase, hydrolase, lipid degr 99.83
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 Back     alignment and structure
Probab=99.89  E-value=1.3e-23  Score=149.67  Aligned_cols=78  Identities=27%  Similarity=0.548  Sum_probs=69.5

Q ss_pred             ccCCceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCCC-----CceeEEEecCCC
Q psy18040          3 SAKSLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKST-----GRGTLYLLTRDE   76 (82)
Q Consensus         3 ~~~~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~~-----~~G~~yl~T~~~   76 (82)
                      ++.+.+.|||.| ++||+|||.++++|+|++|++|++|+.|.|..|.. ..|+.||+++++..     .+|+|||.|+++
T Consensus       255 ~~~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~-~~~~~mG~~~~~~~~~~~~~~g~~yl~T~~~  333 (449)
T 1hpl_A          255 GTRDFAACNHLRSYKYYTDSILNPDGFAGFSCASYSDFTANKCFPCSS-EGCPQMGHYADRFPGRTKGVGQLFYLNTGDA  333 (449)
T ss_dssp             TSSCCCCHHHHHHHHHHHHHHHCTTSCBCEECSCHHHHHTTCSCSCCT-TCCCBSSTTGGGCTTTTSSSSEEEEECCCSS
T ss_pred             ccccCCccCchhHHHHHHHHhCCCCCceeeeCCCHHHHhcCCccCCCC-CcccccCccCcccccccccccceEEeccccc
Confidence            345678899999 99999999988999999999999999999998864 46899999998663     289999999999


Q ss_pred             CCCCC
Q psy18040         77 EPFCG   81 (82)
Q Consensus        77 ~Pf~~   81 (82)
                      +|||+
T Consensus       334 ~Pf~~  338 (449)
T 1hpl_A          334 SNFAR  338 (449)
T ss_dssp             SSCCC
T ss_pred             CCccc
Confidence            99986



>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A Back     alignment and structure
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* Back     alignment and structure
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} Back     alignment and structure
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 82
d1bu8a2338 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal 3e-17
d1rp1a2337 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal 2e-16
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 338 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Pancreatic lipase, N-terminal domain
domain: Pancreatic lipase, N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]
 Score = 71.7 bits (175), Expect = 3e-17
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 20  SSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKSTG-----RGTLYLLTR 74
           SSIL    F    C SYEK+ + +CF C +   C  MG+YAD+  G       T+YL T 
Sbjct: 274 SSILNPDGFLGYPCSSYEKFQQNDCFPCPE-EGCPKMGHYADQFEGKTATVEQTVYLNTG 332

Query: 75  DEEPF 79
           D   F
Sbjct: 333 DSGNF 337


>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query82
d1bu8a2338 Pancreatic lipase, N-terminal domain {Rat (Rattus 99.9
d1rp1a2337 Pancreatic lipase, N-terminal domain {Dog (Canis f 99.9
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Pancreatic lipase, N-terminal domain
domain: Pancreatic lipase, N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.90  E-value=3.7e-25  Score=151.60  Aligned_cols=76  Identities=36%  Similarity=0.623  Sum_probs=68.2

Q ss_pred             cCCceeecccc-HHHHHhhcCCCCCceeeecCChhhhhcCCcccCCCCCCcccCCcccCCC-----CCceeEEEecCCCC
Q psy18040          4 AKSLVEQASMK-TRKGESSILPRCNFPALACESYEKYLEGNCFNCTDPTKCGNMGYYADKS-----TGRGTLYLLTRDEE   77 (82)
Q Consensus         4 ~~~~~~CsH~R-~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~~~~~~~MG~~~~~~-----~~~G~~yl~T~~~~   77 (82)
                      ....+.|||.| ++||+|||.++++|+|++|.+|++|+.|.|.+|.. ..|+.|||++++.     ..+|+|||+|++++
T Consensus       257 ~~~~~~CsH~ra~~yf~ESI~~~~~F~a~~C~s~~~~~~g~C~~c~~-~~~~~MG~~a~~~~~~~~~~~G~yyl~T~~~~  335 (338)
T d1bu8a2         257 TQNFVACNHLRSYKYYASSILNPDGFLGYPCSSYEKFQQNDCFPCPE-EGCPKMGHYADQFEGKTATVEQTVYLNTGDSG  335 (338)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHCGGGCBCEECSCHHHHHTTCSCSCCT-TCCCBSSGGGGGCTTTTSSSSEEEEECCCSST
T ss_pred             cccccccchHHHHHHHHHHhcCCCCceeeeCCCHHHHHhCCCCCCCC-CCCCccCcccccccCCCCCcceEEEEecCCCC
Confidence            44567899999 99999999988999999999999999999998865 6789999998863     35899999999999


Q ss_pred             CCC
Q psy18040         78 PFC   80 (82)
Q Consensus        78 Pf~   80 (82)
                      ||+
T Consensus       336 Pfa  338 (338)
T d1bu8a2         336 NFT  338 (338)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            996



>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure