Psyllid ID: psy18189

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MPELTELDKAVSSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHcccccccccEEEEEEEcccEEEEEEccEEEEcccccccEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccHHcccHHccHHcccccccHHHHHcccccHHHHHHHHHHccccccccEEEEEEEccccEEEEEcccccccccccccccHHHHcc
Coil and Loop (DISEMBL)
MPELTELDKAvssggeaelhddsgtesdsedsipeleasgdplgsagasgLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVtirksknilfvinkpdvfknpplsgsgfkdiln
Flexible Loop (DISEMBL)
MPELTELDKAvssggeaelhddsgtesdsEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKimsklglkqiqgvsrvtirksknilfvinkpdvfknpplsgsgfkdiln
Low Complexity Region (SEG)
MPELTELDKAVSSGGEAELHddsgtesdsedsIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN
Disordered region (IsUnstruct)
**************************************************************************LGLKQIQGVSRVTIRKSKNILFVINKPDVF***************
Disordered Region (DISOPRED)
***************************************************************************GLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN
Disordered Region (DISEMBL)
*********************************PELEASGDPLGSAGASGLAN*****************IMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN
Disordered Region (DISPRO)
*****************************************************************KK*RK**SKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFK**L*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPELTELDKAVSSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q94518	217	Nascent polypeptide-assoc	yes	N/A	0.890	0.488	0.655	2e-26
Q6IP73	213	Nascent polypeptide-assoc	N/A	N/A	0.789	0.441	0.592	1e-23
P70670	2187	Nascent polypeptide-assoc	yes	N/A	0.714	0.038	0.626	2e-23
Q68F90	214	Nascent polypeptide-assoc	yes	N/A	0.789	0.439	0.586	4e-23
Q8AWF2	215	Nascent polypeptide-assoc	yes	N/A	0.714	0.395	0.615	5e-23
Q60817	215	Nascent polypeptide-assoc	no	N/A	0.714	0.395	0.604	1e-22
Q13765	215	Nascent polypeptide-assoc	no	N/A	0.714	0.395	0.604	1e-22
Q5R9I9	215	Nascent polypeptide-assoc	yes	N/A	0.714	0.395	0.604	2e-22
Q5E9A1	215	Nascent polypeptide-assoc	yes	N/A	0.714	0.395	0.604	2e-22
Q6QN10	215	Nascent polypeptide-assoc	N/A	N/A	0.714	0.395	0.604	2e-22

>sp|Q94518|NACA_DROME Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/116 (65%), Positives = 88/116 (75%), Gaps = 10/116 (8%)

Query: 1   MPELTEL--DKAVSSGGEAELHD----DSGTESDSEDSIPELE---ASGDPLGSAGASGL 51
           MPELTE+  + A S+  EA+  D    D G++SDS+  +P LE   A+   LG  GA+GL
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGG-GATGL 59

Query: 52  ANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
             DLVSKAKQSRGEKKARKIM KLGLKQIQGV+RVTIRKSKNILFVIN PDV+KNP
Sbjct: 60  PIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNP 115

May promote appropriate targeting of ribosome-nascent polypeptide complexes (By similarity). Required for correct localization of the osk/oskar protein to the posterior pole during embryonic development. The osk protein directs the recruitment of molecules responsible for posterior body patterning and germline formation in the embryo.
Drosophila melanogaster (taxid: 7227)

>sp|Q6IP73|NACA_XENLA Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 69/103 (66%), Gaps = 9/103 (8%)

Query: 14  GGEAELHDD-----SGTESDSEDSIPELEASGDPLGSAGASGLANDL----VSKAKQSRG 64
             E ELH       SGTESDS+DS PELE              A ++    VSKAKQSR 
Sbjct: 11  AAEQELHQPQVESGSGTESDSDDSPPELEQDTQTTTQQAQLAAAAEIDEEPVSKAKQSRS 70

Query: 65  EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 71  EKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 113

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Xenopus laevis (taxid: 8355)

>sp|P70670|NACAM_MOUSE Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 6/91 (6%)

Query: 23   SGTESDSEDSIPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLG 76
            SGTESDS++S+PELE       +      A A+ +  + VSKAKQSR EKKARK MSKLG
Sbjct: 1997 SGTESDSDESVPELEEQDSTQTATQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 2056

Query: 77   LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
            L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 2057 LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 2087

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites) (By similarity). Isoform 1 and isoform 2 appear to bind DNA and play roles in transcription. May act to regulate the expression of genes involved in the development of myotubes.

Mus musculus (taxid: 10090)

>sp|Q68F90|NACA_XENTR Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/104 (58%), Positives = 70/104 (67%), Gaps = 10/104 (9%)

Query: 14  GGEAELHDD-----SGTESDSEDSIPELEASGDPLGSAGASG-----LANDLVSKAKQSR 63
             E ELH       SGTESDS+DS PELE       +  A       +  + VSKAKQSR
Sbjct: 11  AAEQELHQPQAETGSGTESDSDDSPPELEQDSTQTTTQQAQLAAAAEIDEEPVSKAKQSR 70

Query: 64  GEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
            EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 71  SEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 114

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Xenopus tropicalis (taxid: 8364)

>sp|Q8AWF2|NACA_ORENI Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS+DS+PELE           +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDDSVPELEEQDSAQTQTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Oreochromis niloticus (taxid: 8128)

>sp|Q60817|NACA_MOUSE Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQTATQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites) (By similarity). Isoform 1 and isoform 2 appear to bind DNA and play roles in transcription. Isoform 1 may function as a specific coactivator for JUN, acting to stabilize the interaction of JUN homodimers with promoter elements.

Mus musculus (taxid: 10090)

>sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Homo sapiens (taxid: 9606)

>sp|Q5R9I9|NACA_PONAB Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Pongo abelii (taxid: 9601)

>sp|Q5E9A1|NACA_BOVIN Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Bos taurus (taxid: 9913)

>sp|Q6QN10|NACA_CHILA Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 6/91 (6%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEGQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSP 115

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Chinchilla lanigera (taxid: 34839)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
156538110	211	PREDICTED: nascent polypeptide-associate	0.899	0.507	0.7	8e-32
332030863	258	Nascent polypeptide-associated complex s	0.890	0.410	0.692	3e-31
307190648	245	Nascent polypeptide-associated complex s	0.890	0.432	0.692	5e-31
307206942	214	Nascent polypeptide-associated complex s	0.899	0.5	0.681	8e-31
328792166	241	PREDICTED: nascent polypeptide-associate	0.890	0.439	0.675	2e-29
340709764	601	PREDICTED: protein lunapark-B-like [Bomb	0.890	0.176	0.675	2e-29
380027154	214	PREDICTED: nascent polypeptide-associate	0.890	0.495	0.675	2e-29
350411200	214	PREDICTED: nascent polypeptide-associate	0.890	0.495	0.675	2e-29
332376987	219	unknown [Dendroctonus ponderosae]	0.899	0.488	0.655	2e-29
389608811	211	nascent polypeptide associated complex p	0.865	0.488	0.669	2e-29

>gi|156538110|ref|XP_001608212.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 1 [Nasonia vitripennis] gi|345491829|ref|XP_003426718.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 2 [Nasonia vitripennis]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)

Query: 1   MPELTELDKAVSS-GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAGASGLANDLVS 57
           MPELTELDKA SS   +AE   +SGT+SDS+D+IPELE  A+G    +    G+  D+VS
Sbjct: 1   MPELTELDKAASSEPTKAEAAAESGTDSDSDDTIPELEDAATGGVTFAGNVPGMPVDMVS 60

Query: 58  KAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           KAKQSRGEKKARKIMSKLGLK + GV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 61  KAKQSRGEKKARKIMSKLGLKPVTGVNRVTIRKSKNILFVINKPDVLKNP 110

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030863|gb|EGI70499.1| Nascent polypeptide-associated complex subunit alpha [Acromyrmex echinatior]

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/114 (69%), Positives = 90/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDPLGSAG-----ASGLAN 53
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P G+ G      +GL  
Sbjct: 38  MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTP-GTVGFPGTTVTGLPI 96

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 97  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 150

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190648|gb|EFN74612.1| Nascent polypeptide-associated complex subunit alpha [Camponotus floridanus]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/114 (69%), Positives = 90/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDPLGSAG-----ASGLAN 53
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P G+ G      +GL  
Sbjct: 32  MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTP-GTVGFPGPTVTGLPI 90

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 91  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 144

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206942|gb|EFN84786.1| Nascent polypeptide-associated complex subunit alpha [Harpegnathos saltator]

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 87/113 (76%), Gaps = 6/113 (5%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDP----LGSAGASGLAND 54
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P          +GL  D
Sbjct: 1   MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTPGTVSFPGTAVTGLPID 60

Query: 55  LVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           +VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 61  MVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 113

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792166|ref|XP_623555.2| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 1 [Apis mellifera]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 28  MPELTELDKAASSEPTKVEAA-ATGSGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 86

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 87  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 140

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709764|ref|XP_003393472.1| PREDICTED: protein lunapark-B-like [Bombus terrestris]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 388 MPELTELDKAASSEPTKVEAAAAG-SGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 446

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 447 DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 500

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027154|ref|XP_003697296.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like [Apis florea]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSSGG---EAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 1   MPELTELDKAASSEPTKVEAA-ATGSGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 59

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 60  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 113

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411200|ref|XP_003489271.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like [Bombus impatiens]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 8/114 (7%)

Query: 1   MPELTELDKAVSSGG---EAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 1   MPELTELDKAASSEPTKVEAAAAG-SGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 59

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNP
Sbjct: 60  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNP 113

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332376987|gb|AEE63633.1| unknown [Dendroctonus ponderosae]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/116 (65%), Positives = 87/116 (75%), Gaps = 9/116 (7%)

Query: 1   MPELTELDKAVSSGGEAELHD---DSGTESDSEDSIPELE------ASGDPLGSAGASGL 51
           MPELTE+DKA     + E  +   +S TESDS++ IPELE      A+      A A+GL
Sbjct: 1   MPELTEVDKATPVEPKPEKPEQSAESSTESDSDEEIPELEDAGAATAATAAFPGASAAGL 60

Query: 52  ANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
             D+VSKAKQSRGEKKARKIMSKLGLK +QGVSRVTIRKSKNILFVINKPDV+KNP
Sbjct: 61  PVDMVSKAKQSRGEKKARKIMSKLGLKPVQGVSRVTIRKSKNILFVINKPDVYKNP 116

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608811|dbj|BAM18017.1| nascent polypeptide associated complex protein alpha subunit [Papilio xuthus]

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/112 (66%), Positives = 88/112 (78%), Gaps = 9/112 (8%)

Query: 1   MPELTELDKAVSSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLAN-----DL 55
           MPELTELDKA +S  E    + + ++SDS+D+IPELE +G P    GA G+ N     D+
Sbjct: 1   MPELTELDKATASMTEKRKEETASSDSDSDDTIPELEDAGAP----GAGGITNPIAGIDI 56

Query: 56  VSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           VSKAKQSRGEKKARKIMSKLGLK +QGV+RVTIRKSKNILFVIN PDV+KNP
Sbjct: 57  VSKAKQSRGEKKARKIMSKLGLKPVQGVNRVTIRKSKNILFVINSPDVYKNP 108

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
FB|FBgn0086904	217	Nacalpha "Nascent polypeptide	0.890	0.488	0.603	1.6e-24
MGI|MGI:106095	215	Naca "nascent polypeptide-asso	0.521	0.288	0.725	2.8e-20
WB|WBGene00022042	197	icd-2 [Caenorhabditis elegans	0.613	0.370	0.657	6.5e-19
UNIPROTKB|Q86S66	197	Y65B4BR.5 "Nascent polypeptide	0.613	0.370	0.657	6.5e-19
UNIPROTKB|H9KYU8	192	NACA2 "Uncharacterized protein	0.630	0.390	0.617	1.7e-18
UNIPROTKB|Q5E9A1	215	NACA "Nascent polypeptide-asso	0.630	0.348	0.617	1.7e-18
UNIPROTKB|Q13765	215	NACA "Nascent polypeptide-asso	0.630	0.348	0.617	1.7e-18
UNIPROTKB|Q2HYP8	160	Q2HYP8 "Nascent-polypeptide-as	0.630	0.468	0.620	1.7e-18
MGI|MGI:3603030	1504	Nacad "NAC alpha domain contai	0.823	0.065	0.5	3.8e-17
UNIPROTKB|O15069	1562	NACAD "NAC-alpha domain-contai	0.806	0.061	0.494	1.4e-16

FB|FBgn0086904 Nacalpha "Nascent polypeptide associated complex protein alpha subunit" [Drosophila melanogaster (taxid:7227)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 70/116 (60%), Positives = 79/116 (68%)

Query:     1 MPELTEL--DKAVSSGGEAELHXXXX----XXXXXXXXIPELE---ASGDPLGSAGASGL 51
             MPELTE+  + A S+  EA+                  +P LE   A+   LG  GA+GL
Sbjct:     1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGG-GATGL 59

Query:    52 ANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
               DLVSKAKQSRGEKKARKIM KLGLKQIQGV+RVTIRKSKNILFVIN PDV+KNP
Sbjct:    60 PIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNP 115

GO:0048477 "oogenesis" evidence=IMP

GO:0005854 "nascent polypeptide-associated complex" evidence=ISS;NAS

GO:0005515 "protein binding" evidence=IPI

GO:0007317 "regulation of pole plasm oskar mRNA localization" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

MGI|MGI:106095 Naca "nascent polypeptide-associated complex alpha polypeptide" [Mus musculus (taxid:10090)]

 Score = 221 (82.9 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
 Identities = 45/62 (72%), Positives = 53/62 (85%)

Query:    46 AGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFK 105
             A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K
Sbjct:    54 AAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYK 113

Query:   106 NP 107
             +P
Sbjct:   114 SP 115

GO:0003677 "DNA binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IDA

WB|WBGene00022042 icd-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 48/73 (65%), Positives = 57/73 (78%)

Query:    35 ELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNI 94
             E E + +    A A+GL + +  +AKQSR EKKARK+ SKLGLKQ+ GVSRV IRKSKNI
Sbjct:    29 EQELTEEQRRVAEAAGLGDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNI 88

Query:    95 LFVINKPDVFKNP 107
             LFVINKPDVFK+P
Sbjct:    89 LFVINKPDVFKSP 101

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0045132 "meiotic chromosome segregation" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0019915 "lipid storage" evidence=IMP

UNIPROTKB|Q86S66 Y65B4BR.5 "Nascent polypeptide-associated complex subunit alpha" [Caenorhabditis elegans (taxid:6239)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 48/73 (65%), Positives = 57/73 (78%)

Query:    35 ELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNI 94
             E E + +    A A+GL + +  +AKQSR EKKARK+ SKLGLKQ+ GVSRV IRKSKNI
Sbjct:    29 EQELTEEQRRVAEAAGLGDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNI 88

Query:    95 LFVINKPDVFKNP 107
             LFVINKPDVFK+P
Sbjct:    89 LFVINKPDVFKSP 101

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|H9KYU8 NACA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 50/81 (61%), Positives = 60/81 (74%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    12 VPELEEHDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 71

Query:    87 TIRKSKNILFVINKPDVFKNP 107
             TIRKSKNILFVI KPDV+K+P
Sbjct:    72 TIRKSKNILFVITKPDVYKSP 92

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IEA

UNIPROTKB|Q5E9A1 NACA "Nascent polypeptide-associated complex subunit alpha" [Bos taurus (taxid:9913)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 50/81 (61%), Positives = 60/81 (74%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    35 VPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 94

Query:    87 TIRKSKNILFVINKPDVFKNP 107
             TIRKSKNILFVI KPDV+K+P
Sbjct:    95 TIRKSKNILFVITKPDVYKSP 115

GO:0005634 "nucleus" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0015031 "protein transport" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q13765 NACA "Nascent polypeptide-associated complex subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 50/81 (61%), Positives = 60/81 (74%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    35 VPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 94

Query:    87 TIRKSKNILFVINKPDVFKNP 107
             TIRKSKNILFVI KPDV+K+P
Sbjct:    95 TIRKSKNILFVITKPDVYKSP 115

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0005854 "nascent polypeptide-associated complex" evidence=TAS

GO:0006412 "translation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0003231 "cardiac ventricle development" evidence=ISS

GO:0010664 "negative regulation of striated muscle cell apoptotic process" evidence=ISS

GO:0043403 "skeletal muscle tissue regeneration" evidence=ISS

GO:0048633 "positive regulation of skeletal muscle tissue growth" evidence=ISS

GO:0048742 "regulation of skeletal muscle fiber development" evidence=ISS

GO:0061384 "heart trabecula morphogenesis" evidence=ISS

GO:1901227 "negative regulation of transcription from RNA polymerase II promoter involved in heart development" evidence=ISS

GO:1901228 "positive regulation of transcription from RNA polymerase II promoter involved in heart development" evidence=ISS

GO:2000138 "positive regulation of cell proliferation involved in heart morphogenesis" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

UNIPROTKB|Q2HYP8 Q2HYP8 "Nascent-polypeptide-associated complex alpha polypeptide" [Ictalurus punctatus (taxid:7998)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 49/79 (62%), Positives = 58/79 (73%)

Query:    33 IPELEASGDPLGS----AGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTI 88
             +PELE            A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RVTI
Sbjct:    35 VPELEEQDSTQTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTI 94

Query:    89 RKSKNILFVINKPDVFKNP 107
             RKSKNILFVI KPDV+K+P
Sbjct:    95 RKSKNILFVITKPDVYKSP 113

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

MGI|MGI:3603030 Nacad "NAC alpha domain containing" [Mus musculus (taxid:10090)]

 Score = 225 (84.3 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 51/102 (50%), Positives = 65/102 (63%)

Query:     6 ELDKAVSSGGEAELHXXXXXXXXXXXXIPELEASGDPLGSAGASGLANDLVSKAKQSRGE 65
             +  +   SG  +E H             P+   S  P  + G +G   + ++KAKQSR E
Sbjct:  1302 DAQRTPGSGQRSESHGESSSELGEQDLSPQ--KSQCP--AQGPAGSNEETIAKAKQSRSE 1357

Query:    66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
             KKARK MSKLGL+QIQGV+R+TI+KSKNILFVI KPDVFK+P
Sbjct:  1358 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSP 1399

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|O15069 NACAD "NAC-alpha domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 220 (82.5 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 49/99 (49%), Positives = 62/99 (62%)

Query:     9 KAVSSGGEAELHXXXXXXXXXXXXIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKA 68
             +A+ SG  ++ H            +            AG S    + ++KAKQSR EKKA
Sbjct:  1361 RALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGS---EETIAKAKQSRSEKKA 1417

Query:    69 RKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
             RK MSKLGL+QIQGV+R+TI+KSKNILFVI KPDVFK+P
Sbjct:  1418 RKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSP 1456

GO:0015031 "protein transport" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P70670	NACAM_MOUSE	No assigned EC number	0.6263	0.7142	0.0388	yes	N/A
Q9LHG9	NACA1_ARATH	No assigned EC number	0.6896	0.4873	0.2857	yes	N/A
Q94518	NACA_DROME	No assigned EC number	0.6551	0.8907	0.4884	yes	N/A
Q5R9I9	NACA_PONAB	No assigned EC number	0.6043	0.7142	0.3953	yes	N/A
Q8AWF2	NACA_ORENI	No assigned EC number	0.6153	0.7142	0.3953	yes	N/A
Q68F90	NACA_XENTR	No assigned EC number	0.5865	0.7899	0.4392	yes	N/A
Q5E9A1	NACA_BOVIN	No assigned EC number	0.6043	0.7142	0.3953	yes	N/A
Q86S66	NACA_CAEEL	No assigned EC number	0.625	0.6722	0.4060	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	119
pfam01849	50	pfam01849, NAC, NAC domain	4e-11
COG1308	122	COG1308, EGD2, Transcription factor homologous to	0.001

>gnl|CDD|202009 pfam01849, NAC, NAC domain

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 19/36 (52%), Positives = 22/36 (61%)

Query: 73  SKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPP 108
            KLGLK I+GV  VTIRK    + V N P V K+P 
Sbjct: 1   KKLGLKPIEGVEEVTIRKKDGKVLVFNNPKVQKSPG 36

Length = 50

>gnl|CDD|224227 COG1308, EGD2, Transcription factor homologous to NACalpha-BTF3 [Transcription]

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 66  KKARKIMSKLG--LKQIQGVSRVTIRKSKNILFVINKPDVFK 105
           +K +K+M ++G  ++++ GV RV I+       VI  P V  
Sbjct: 9   RKLKKLMKQMGIDVEELDGVERVIIKLKDTEY-VIENPQVTV 49

Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
KOG2239|consensus	209		100.0
PF01849	58	NAC: NAC domain; InterPro: IPR002715 Nascent polyp	99.77
PRK06369	115	nac nascent polypeptide-associated complex protein	99.66
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	98.46
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	97.98
PF10411	57	DsbC_N: Disulfide bond isomerase protein N-terminu	90.9
KOG2240|consensus	162		88.61
PRK10877	232	protein disulfide isomerase II DsbC; Provisional	82.41

>KOG2239|consensus

Probab=100.00  E-value=5e-38  Score=249.66  Aligned_cols=106  Identities=52%  Similarity=0.725  Sum_probs=94.9

Q ss_pred             cCCCCCcccCCCCCCCCCCCCccccccCCCCCCccccCCCCcccchhhccChhHHHHHHHHHhcCCeeecCeeEEEEEec
Q psy18189         12 SSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKS   91 (119)
Q Consensus        12 ~~~~~~~~~~~s~~~sdsdd~vPeLee~~~~~q~~~~~~~~~~~~~~~KqSR~EKKARKam~KLGLK~V~gI~RVtirKs   91 (119)
                      ..+..+....+++++|+++|++|+|++++.....++++++++++..++||||+||||||+|+|||||+|+||+||||||+
T Consensus        13 ~~a~~~~~~~~~~~~~~~~ed~~d~~e~d~~~~~~~~~~~~~~~~~~akqsrsekKark~m~KLGlk~v~gV~RVti~ks   92 (209)
T KOG2239|consen   13 QEAPQPQAETGSGTESDSDEDVPELEEQDSTETTDEAAEIDEEPVAKAKQSRSEKKARKAMLKLGLKQVTGVTRVTIRKS   92 (209)
T ss_pred             hhccchhhccccCCCCcccccccccccccccccchhhhcccccchhhhhcchHHHHHHHHHHhcCCccccceeEEEEEec
Confidence            33444455689999999999999999998543337788999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCeeeeCCCCCcEE-Eeec
Q psy18189         92 KNILFVINKPDVFKNPPLSGSG-FKDI  117 (119)
Q Consensus        92 knilFvI~~PdVyKsp~sdtyV-Fg~~  117 (119)
                      |||||||++|||||+|+||||| |||.
T Consensus        93 KNilfvI~kPdVyKsp~sdtYiiFGea  119 (209)
T KOG2239|consen   93 KNILFVITKPDVYKSPASDTYIIFGEA  119 (209)
T ss_pred             ccEEEEecCCceeccCCCceEEEeccc
Confidence            9999999999999999999997 9985

>PF01849 NAC: NAC domain; InterPro: IPR002715 Nascent polypeptide-associated complex (NAC) is among the first ribosome-associated entities to bind the nascent polypeptide after peptide bond formation

Probab=99.77  E-value=6.4e-19  Score=113.69  Aligned_cols=53  Identities=45%  Similarity=0.715  Sum_probs=43.3

Q ss_pred             HHHHHHHHHhcCCeeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEE-Eeec
Q psy18189         65 EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSG-FKDI  117 (119)
Q Consensus        65 EKKARKam~KLGLK~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyV-Fg~~  117 (119)
                      |||+|++|.||||++++||.||+|+++++.+|+|++|+||++++++||+ ||+.
T Consensus         1 ekk~~~~l~klgl~~i~~i~eV~i~~~dg~~~~~~~P~V~~~~~~~tyvV~G~~   54 (58)
T PF01849_consen    1 EKKLQKMLKKLGLKEIPGIEEVTIRKDDGTVFVFNNPEVQKSPGSNTYVVFGEA   54 (58)
T ss_dssp             -------GHHCT-EEETTEEEEEEEETTTEEEEEESEEEEEETTCCEEEEESEE
T ss_pred             CHHHHHHHHHcCCcccCCcEEEEEEECCceEEEEcCCeEEEcCCCCEEEEEeee
Confidence            7999999999999999999999999999999999999999999999888 8874

The nascent polypeptide-associated complex (NAC) of yeast functions in the targeting process of ribosomes to the ER membrane []. NAC may prevent binding of ribosome nascent chains (RNCs) without a signal sequence to yeast membranes.; PDB: 3MCE_D 3MCB_A 3LKX_B 1TR8_B.

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=99.66  E-value=1.6e-16  Score=117.11  Aligned_cols=52  Identities=19%  Similarity=0.341  Sum_probs=48.5

Q ss_pred             hHHHHHHHHHhcCCe--eecCeeEEEEEecCcEEEEEcCCeee--eCCCCCcEE-Eeec
Q psy18189         64 GEKKARKIMSKLGLK--QIQGVSRVTIRKSKNILFVINKPDVF--KNPPLSGSG-FKDI  117 (119)
Q Consensus        64 ~EKKARKam~KLGLK--~V~gI~RVtirKsknilFvI~~PdVy--Ksp~sdtyV-Fg~~  117 (119)
                      ++||+||+|.||||+  ++ ||.|||||+++ .+|||++|+||  ++++++||+ ||+-
T Consensus         6 nprk~rkmmkkmGik~e~i-~v~~V~Ir~~~-~~~Vi~~P~V~~m~~~g~~tY~I~Ge~   62 (115)
T PRK06369          6 NPRKMKQMMKQMGIDVEEL-DVEEVIIRLKD-KEIVFENPQVTVMDAQGQKTYQIVGEP   62 (115)
T ss_pred             CHHHHHHHHHHcCCcchhc-CeEEEEEEeCC-EEEEEcCCeEEEEecCCCcEEEEEecc
Confidence            579999999999999  99 99999999999 99999999999  899999776 9973

>TIGR00264 alpha-NAC-related protein

Probab=98.46  E-value=3.7e-07  Score=67.89  Aligned_cols=52  Identities=19%  Similarity=0.189  Sum_probs=45.4

Q ss_pred             HHHHHHHHHhcCCeee-cCeeEEEEEe-cCcEEEEEcCCeeeeCCCCCcEE-Eee
Q psy18189         65 EKKARKIMSKLGLKQI-QGVSRVTIRK-SKNILFVINKPDVFKNPPLSGSG-FKD  116 (119)
Q Consensus        65 EKKARKam~KLGLK~V-~gI~RVtirK-sknilFvI~~PdVyKsp~sdtyV-Fg~  116 (119)
                      =|+.|++|.+|||+.. .+|.+|+||. ++.++|...++.||+.++..||. ||+
T Consensus        11 ~~~mkkmMk~MGi~~~eidV~~ViIk~~~k~ivf~~p~V~~m~~~G~~tYqI~G~   65 (116)
T TIGR00264        11 LKQMQKMMKQMGMEMEDLDVEEVIIVFDDEEWIFENPKVQVMDILGVKTYQITGK   65 (116)
T ss_pred             HHHHHHHHHHcCCCccccccEEEEEEeCCceEEEecCeeEEEecCCcEEEEEecc
Confidence            3699999999998876 5699999999 68899888888999999998776 886

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=97.98  E-value=1.2e-05  Score=60.38  Aligned_cols=40  Identities=33%  Similarity=0.649  Sum_probs=37.0

Q ss_pred             HHHHHHHHhcC--CeeecCeeEEEEEecCcEEEEEcCCeeeeC
Q psy18189         66 KKARKIMSKLG--LKQIQGVSRVTIRKSKNILFVINKPDVFKN  106 (119)
Q Consensus        66 KKARKam~KLG--LK~V~gI~RVtirKsknilFvI~~PdVyKs  106 (119)
                      ++.+|+|..||  ++++.||.||.|+..++. +||++|.||.-
T Consensus         9 r~l~k~mkqmGi~~eeld~v~~V~i~~kd~e-~vi~~P~V~~~   50 (122)
T COG1308           9 RKLKKLMKQMGIDVEELDGVERVIIKLKDTE-YVIENPQVTVM   50 (122)
T ss_pred             HHHHHHHHHhCCCceeccCceEEEEEcCCce-EEeeCCcEEee
Confidence            67789999998  999999999999999998 99999999964

>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC

Probab=90.90  E-value=0.25  Score=31.57  Aligned_cols=32  Identities=16%  Similarity=0.177  Sum_probs=22.8

Q ss_pred             eecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEEeecCC
Q psy18189         79 QIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN  119 (119)
Q Consensus        79 ~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVFg~~~~  119 (119)
                      +++|+..|++ +++++        +|-++.+.++++|++++
T Consensus        21 pi~GlyeV~~-~~~~i--------~Y~~~dg~yli~G~l~d   52 (57)
T PF10411_consen   21 PIPGLYEVVL-KGGGI--------LYVDEDGRYLIQGQLYD   52 (57)
T ss_dssp             SSTTEEEEEE--TTEE--------EEEETTSSEEEES-EEE
T ss_pred             CCCCeEEEEE-CCCeE--------EEEcCCCCEEEEeEEEe
Confidence            5788888888 55554        46678899999999863

The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.

>KOG2240|consensus

Probab=88.61  E-value=0.28  Score=38.61  Aligned_cols=52  Identities=23%  Similarity=0.376  Sum_probs=47.4

Q ss_pred             hhHHHHHHHHHhcCCeeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEE
Q psy18189         63 RGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGF  114 (119)
Q Consensus        63 R~EKKARKam~KLGLK~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVF  114 (119)
                      ..-||..--|.||++.+++||..|.|-|.+.-..-+++|-|-++.+.+|+.|
T Consensus        39 ~ddkKlqs~lkkl~v~~i~~i~evn~~k~~g~Vihf~~~~vqasl~~nTf~I   90 (162)
T KOG2240|consen   39 ADDKKLQSSLKKLGVNNIPGIEEVNMFKNDGTVIHFNNPKVQASLAANTFTI   90 (162)
T ss_pred             cccchhhhhhhhhccccccchhHhhhccccceeEecCCccccccccCCeEEE
Confidence            3457888889999999999999999999999999999999999999998875

>PRK10877 protein disulfide isomerase II DsbC; Provisional

Probab=82.41  E-value=3.5  Score=32.60  Aligned_cols=44  Identities=11%  Similarity=0.237  Sum_probs=30.2

Q ss_pred             HHHHHHHHhcCCe-------eecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEEeecCC
Q psy18189         66 KKARKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN  119 (119)
Q Consensus        66 KKARKam~KLGLK-------~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVFg~~~~  119 (119)
                      ...+++|.++|++       |++|+..|.+  ++++        +|-++.+.++++|++++
T Consensus        24 ~~~~~~l~~~~~~v~~v~~sp~~Gl~ev~~--~~~i--------~Y~~~dg~y~i~G~l~d   74 (232)
T PRK10877         24 AAIQQTLAKLGIQSADIQPSPVAGMKTVLT--ESGV--------LYITDDGKHIIQGPMYD   74 (232)
T ss_pred             HHHHHHHHHcCCceeEEccCCCCCeEEEEE--CCeE--------EEEcCCCCEEEeeeeEe
Confidence            4556667776654       4678877765  2332        56778889999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	119
3mcb_A	54	Crystal Structure Of Nac Domains Of Human Nascent P		4e-12
3mce_A	61	Crystal Structure Of The Nac Domain Of Alpha Subuni		3e-11
3lkx_B	54	Human Nac Dimerization Domain Length = 54		7e-10

>pdb|3MCB|A Chain A, Crystal Structure Of Nac Domains Of Human Nascent Polypeptide- Associated Complex (Nac) Length = 54

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 2   MSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 37

>pdb|3MCE|A Chain A, Crystal Structure Of The Nac Domain Of Alpha Subunit Of Nascent Polypeptide-Associated Complex(Nac) Length = 61

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
            SKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 8   FSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 43

>pdb|3LKX|B Chain B, Human Nac Dimerization Domain Length = 54

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 76  GLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           GL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 2   GLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 33

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	119
3mce_A	61	Nascent polypeptide-associated complex subunit Al;	6e-16
3mcb_A	54	Nascent polypeptide-associated complex subunit Al;	1e-15
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	4e-05

>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens} Length = 61

 Score = 65.6 bits (160), Expect = 6e-16
 Identities = 28/36 (77%), Positives = 33/36 (91%)

Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
            SKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 8   FSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 43

>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B Length = 54

 Score = 64.4 bits (157), Expect = 1e-15
 Identities = 29/36 (80%), Positives = 34/36 (94%)

Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
           MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+P
Sbjct: 2   MSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSP 37

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis} Length = 102

 Score = 38.8 bits (90), Expect = 4e-05
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 72  MSKLGLK--QIQGVSRVTIR-KSKNILFVINKPDVFKNP 107
           M ++G+    ++GV  V I+ K K I+    K +V +  
Sbjct: 4   MKQMGMDMKDLRGVEEVVIKLKRKEIIIKNPKVNVMEFM 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	119
3mce_A	61	Nascent polypeptide-associated complex subunit Al;	99.91
3mcb_A	54	Nascent polypeptide-associated complex subunit Al;	99.91
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	99.56
3mcb_B	58	Transcription factor BTF3; beta-barrel like struct	98.27
3lkx_A	66	Transcription factor BTF3; beta-barrel, chaperone;	98.2
1eej_A	216	Thiol:disulfide interchange protein; oxidoreductas	84.45

>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens}

Probab=99.91  E-value=1.4e-25  Score=148.80  Aligned_cols=49  Identities=59%  Similarity=0.866  Sum_probs=44.0

Q ss_pred             HHHHHhcCCeeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEE-Eeec
Q psy18189         69 RKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSG-FKDI  117 (119)
Q Consensus        69 RKam~KLGLK~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyV-Fg~~  117 (119)
                      ||||+|||||+|+||+||||||++|++|+|++||||++|+||||| |||.
T Consensus         5 ~kal~KLglk~v~gI~rVtirK~~~~lf~i~~PdV~ksp~snTyvVFGea   54 (61)
T 3mce_A            5 SPEFSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEA   54 (61)
T ss_dssp             SCCGGGTTCEECSSEEEEEEEETTTEEEEESSCEEEEC---CEEEEESCE
T ss_pred             HHHHHHcCCeECCCEEEEEEEecCCEEEEECCCcEEEcCCCCeEEEEccc
Confidence            689999999999999999999999999999999999999999888 9974

>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B

Probab=99.91  E-value=7.6e-25  Score=142.02  Aligned_cols=47  Identities=64%  Similarity=0.941  Sum_probs=44.9

Q ss_pred             HHHhcCCeeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEE-Eeec
Q psy18189         71 IMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSG-FKDI  117 (119)
Q Consensus        71 am~KLGLK~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyV-Fg~~  117 (119)
                      ||+|||||+|+||+||||||++|++|+|++||||++|+||||| |||.
T Consensus         1 al~KLglk~v~gI~rVti~K~~~~lf~i~~P~V~ksp~s~TyvVfGea   48 (54)
T 3mcb_A            1 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEA   48 (54)
T ss_dssp             CGGGGTCEECTTEEEEEEESSSSEEEEESSCEEEECTTSSEEEEESCE
T ss_pred             CccccCCEECCCEEEEEEEeCCCEEEEECCCcEEEcCCCCeEEEEcce
Confidence            6899999999999999999999999999999999999999888 9974

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=99.56  E-value=1.5e-15  Score=108.10  Aligned_cols=46  Identities=22%  Similarity=0.305  Sum_probs=35.8

Q ss_pred             HHHHhcCC--eeecCeeEEEEEecCcEEEEEcCCeeee--CCCCCcEE-Eee
Q psy18189         70 KIMSKLGL--KQIQGVSRVTIRKSKNILFVINKPDVFK--NPPLSGSG-FKD  116 (119)
Q Consensus        70 Kam~KLGL--K~V~gI~RVtirKsknilFvI~~PdVyK--sp~sdtyV-Fg~  116 (119)
                      |+|.||||  ++++||.||+||+++ .+|+|++|+||+  +|+++||+ ||+
T Consensus         2 k~lkKLGl~~~~I~gV~eV~i~k~d-~~iv~~~P~V~~~~~~~~~Ty~I~Ge   52 (102)
T 1tr8_A            2 SHMKQMGMDMKDLRGVEEVVIKLKR-KEIIIKNPKVNVMEFMGQKTYQVTGK   52 (102)
T ss_dssp             --------CCEEECCCCEEEEECSS-EEEEEESCEEEEEEETTEEEEEEESC
T ss_pred             chHHHcCCCceeCCCcEEEEEEeCC-EEEEECCCEEEEEcCCCCcEEEEEcC
Confidence            78999999  899999999999999 999999999995  89999887 886

>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}

Probab=98.27  E-value=1.3e-06  Score=57.00  Aligned_cols=37  Identities=16%  Similarity=0.281  Sum_probs=34.9

Q ss_pred             eeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEE
Q psy18189         78 KQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGF  114 (119)
Q Consensus        78 K~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVF  114 (119)
                      ..++||.+|.|.|.++.++.+++|.|+.|+.++|||+
T Consensus         2 ~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNTfvv   38 (58)
T 3mcb_B            2 NNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTI   38 (58)
T ss_dssp             CEECCCCEEEEEETTSEEEEEESCEEEEETTTTEEEE
T ss_pred             cccCCeeEEEEEecCCEEEEecCcceEEeeccceEEE
Confidence            4689999999999999999999999999999999984

>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}

Probab=98.20  E-value=2.7e-06  Score=56.78  Aligned_cols=37  Identities=16%  Similarity=0.281  Sum_probs=33.9

Q ss_pred             eeecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEE
Q psy18189         78 KQIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGF  114 (119)
Q Consensus        78 K~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVF  114 (119)
                      ..++||.+|.|.|.++.++.+++|.|+.|+.+|||||
T Consensus         2 ~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNT~vv   38 (66)
T 3lkx_A            2 NNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTI   38 (66)
T ss_dssp             EECCCEEEEEEEETTSEEEEEESCEEEEECC-CEEEE
T ss_pred             cccCCeeEEEEEecCCEEEEecCcceEEeeccCeeEe
Confidence            4689999999999999999999999999999999984

>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A

Probab=84.45  E-value=1.1  Score=32.65  Aligned_cols=44  Identities=14%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             HHHHHHHHhcCCe-------eecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEEeecCC
Q psy18189         66 KKARKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN  119 (119)
Q Consensus        66 KKARKam~KLGLK-------~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVFg~~~~  119 (119)
                      ..-+++|.++|++       +++|+..|++          .+.-+|-++.+.++++|++++
T Consensus         3 ~~~~~~l~~~~~~v~~v~~~p~~Gl~~v~~----------~~~~~y~~~dg~~~i~G~l~d   53 (216)
T 1eej_A            3 AAIQQTLAKMGIKSSDIQPAPVAGMKTVLT----------NSGVLYITDDGKHIIQGPMYD   53 (216)
T ss_dssp             HHHHHHHHHTTCCEEEEEECSSTTEEEEEE----------TTEEEEEETTSCEEEESCEEE
T ss_pred             HHHHHHHHHcCCceeeeecCCCCCcEEEEE----------CCeEEEEcCCCCEEEEeeeEe
Confidence            3456778888765       3445555554          233567778888999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	119
d1t3ba2	59	Disulfide bond isomerase, DsbC, N-terminal domain	92.26
d1eeja2	60	Disulfide bond isomerase, DsbC, N-terminal domain	91.56

>d1t3ba2 d.17.3.1 (A:2-60) Disulfide bond isomerase, DsbC, N-terminal domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: DsbC/DsbG N-terminal domain-like
family: DsbC/DsbG N-terminal domain-like
domain: Disulfide bond isomerase, DsbC, N-terminal domain
species: Haemophilus influenzae [TaxId: 727]

Probab=92.26  E-value=0.046  Score=33.50  Aligned_cols=41  Identities=10%  Similarity=0.180  Sum_probs=30.5

Q ss_pred             HHHHHhcCCe-------eecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEEeecCC
Q psy18189         69 RKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDILN  119 (119)
Q Consensus        69 RKam~KLGLK-------~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVFg~~~~  119 (119)
                      +|.|++||++       |++|+..|.+  .++++        |-+..+++++.|++++
T Consensus         5 ~~kl~~l~~~v~~i~~spi~GlyeV~~--~~gi~--------Yvs~dg~y~i~G~l~~   52 (59)
T d1t3ba2           5 KRKLQSFNISNIVIKSSPISGIKTAVT--DQGIL--------YVSEDGKYLFEGKLYE   52 (59)
T ss_dssp             HHHHHTTTCCSCCCCBCSSTTEECCEE--TTEEC--------EEESSSSCEECSCCCC
T ss_pred             HHHHHHcCCeeeEEecCCCCCeEEEEE--CCEEE--------EEcCCCCEEEEeEEEE
Confidence            5667888886       6789988877  33433        5667788999999874

>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: DsbC/DsbG N-terminal domain-like
family: DsbC/DsbG N-terminal domain-like
domain: Disulfide bond isomerase, DsbC, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.56  E-value=0.15  Score=31.03  Aligned_cols=44  Identities=11%  Similarity=0.250  Sum_probs=31.1

Q ss_pred             HHHHHHHHHhcCCe-------eecCeeEEEEEecCcEEEEEcCCeeeeCCCCCcEEEeecC
Q psy18189         65 EKKARKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPPLSGSGFKDIL  118 (119)
Q Consensus        65 EKKARKam~KLGLK-------~V~gI~RVtirKsknilFvI~~PdVyKsp~sdtyVFg~~~  118 (119)
                      |..-|+.|+++|++       |++|+..|++  .+++        +|-+..+.+++.|+++
T Consensus         2 ea~i~~~L~~~~~~v~sV~~spi~GlyeV~~--~~~i--------~Yvs~dG~y~i~G~l~   52 (60)
T d1eeja2           2 DAAIQQTLAKMGIKSSDIQPAPVAGMKTVLT--NSGV--------LYITDDGKHIIQGPMY   52 (60)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECSSTTEEEEEE--TTEE--------EEEETTSCEEEESCEE
T ss_pred             HHHHHHHHHhcCCceeEEecCCCCCeEEEEE--CCEE--------EEEcCCCCEEEEeEEE
Confidence            34457788899987       4677777766  3343        3566778888899876