Psyllid ID: psy18230


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
cccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccc
cccEEEcccccccccccccccccEEEEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccc
tgyrlargykdqaletdrpediSHLVFVVHGmgqkmdsgrIIKNATQFRESVMWLKKKYFASSklraeffpvewrsslaldgdiveSITQLNVLNLRHMLNASAMDIMYYTD
tgyrlargykdqaletdrpediSHLVFVVHGmgqkmdsgRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLnasamdimYYTD
TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
*********************ISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYY**
*GYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMW**********LRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
**YRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
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TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query112 2.2.26 [Sep-21-2011]
Q80YA3 547 Phospholipase DDHD1 OS=Mu yes N/A 0.991 0.202 0.576 3e-32
O46606 875 Phospholipase DDHD1 OS=Bo yes N/A 0.991 0.126 0.558 1e-31
Q8NEL9 900 Phospholipase DDHD1 OS=Ho yes N/A 0.991 0.123 0.558 2e-31
Q80Y98 699 Phospholipase DDHD2 OS=Mu no N/A 0.875 0.140 0.336 3e-08
O94830 711 Phospholipase DDHD2 OS=Ho no N/A 0.875 0.137 0.327 4e-08
Q9Y6Y8 1000 SEC23-interacting protein no N/A 0.883 0.099 0.342 1e-07
Q6NZC7 998 SEC23-interacting protein no N/A 0.875 0.098 0.312 4e-06
>sp|Q80YA3|DDHD1_MOUSE Phospholipase DDHD1 OS=Mus musculus GN=Ddhd1 PE=2 SV=1 Back     alignment and function desciption
 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%)

Query: 1   TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
           +G RL RGY ++A   D+P   SH+VFVVHG+GQKMD GRIIKN    RE+   +++K+F
Sbjct: 31  SGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKMEEKHF 90

Query: 61  ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
           ++     EF PVEWRS L LDGD V+SIT   V  LR MLN+SAMDIMYYT
Sbjct: 91  SNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYT 141




Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1 Back     alignment and function description
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2 Back     alignment and function description
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3 Back     alignment and function description
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1 Back     alignment and function description
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
332023936 616 Phospholipase DDHD1 [Acromyrmex echinati 0.991 0.180 0.675 2e-39
383850969 602 PREDICTED: phospholipase DDHD1-like [Meg 0.991 0.184 0.666 5e-39
307206698 610 Phospholipase DDHD1 [Harpegnathos saltat 0.991 0.181 0.675 2e-38
110748986 601 PREDICTED: phospholipase DDHD1-like [Api 0.991 0.184 0.639 3e-38
340715461 602 PREDICTED: phospholipase DDHD1-like [Bom 0.991 0.184 0.639 4e-38
350414488 602 PREDICTED: phospholipase DDHD1-like [Bom 0.991 0.184 0.639 4e-38
345492992 681 PREDICTED: phospholipase DDHD1-like [Nas 0.991 0.162 0.657 9e-38
242014961 1219 phospholipase ddhd1, putative [Pediculus 0.973 0.089 0.654 9e-36
307183315 608 Phospholipase DDHD1 [Camponotus floridan 0.973 0.179 0.648 5e-35
74271909 855 phospholipase DDHD1 [Rattus norvegicus] 0.991 0.129 0.585 6e-31
>gi|332023936|gb|EGI64154.1| Phospholipase DDHD1 [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 91/111 (81%)

Query: 1   TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
           TGYRL RGYK +    D+P DI HLVFVVHG+GQK D+G+II+N T FR+ V WLK+KYF
Sbjct: 233 TGYRLKRGYKTRTNMEDKPRDIDHLVFVVHGIGQKRDTGKIIRNTTCFRDCVDWLKQKYF 292

Query: 61  ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
            +SK R EFFPVEWRSSL LDGDIV++IT  +VL++RH+LN SAMDI+YYT
Sbjct: 293 PNSKHRVEFFPVEWRSSLKLDGDIVDAITPYSVLSIRHLLNTSAMDILYYT 343




Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850969|ref|XP_003701036.1| PREDICTED: phospholipase DDHD1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307206698|gb|EFN84653.1| Phospholipase DDHD1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|110748986|ref|XP_001119847.1| PREDICTED: phospholipase DDHD1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|340715461|ref|XP_003396231.1| PREDICTED: phospholipase DDHD1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350414488|ref|XP_003490333.1| PREDICTED: phospholipase DDHD1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345492992|ref|XP_003426970.1| PREDICTED: phospholipase DDHD1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242014961|ref|XP_002428147.1| phospholipase ddhd1, putative [Pediculus humanus corporis] gi|212512690|gb|EEB15409.1| phospholipase ddhd1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307183315|gb|EFN70184.1| Phospholipase DDHD1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|74271909|ref|NP_001028238.1| phospholipase DDHD1 [Rattus norvegicus] gi|73909173|gb|AAI03650.1| DDHD domain containing 1 [Rattus norvegicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
MGI|MGI:2150302 547 Ddhd1 "DDHD domain containing 0.991 0.202 0.576 1.8e-29
RGD|1308576 855 Ddhd1 "DDHD domain containing 0.991 0.129 0.585 3.6e-29
UNIPROTKB|E1C0T5 807 DDHD1 "Uncharacterized protein 0.991 0.137 0.576 6.7e-29
UNIPROTKB|G3N1K0 835 DDHD1 "Phospholipase DDHD1" [B 0.991 0.132 0.558 3.2e-28
UNIPROTKB|F1N1C0 875 DDHD1 "Phospholipase DDHD1" [B 0.991 0.126 0.558 3.5e-28
UNIPROTKB|O46606 875 DDHD1 "Phospholipase DDHD1" [B 0.991 0.126 0.558 3.5e-28
UNIPROTKB|I3LK98 875 DDHD1 "Uncharacterized protein 0.991 0.126 0.558 3.5e-28
UNIPROTKB|E2RE74 884 DDHD1 "Uncharacterized protein 0.991 0.125 0.558 3.6e-28
UNIPROTKB|Q8NEL9 900 DDHD1 "Phospholipase DDHD1" [H 0.991 0.123 0.558 3.7e-28
UNIPROTKB|F1SFE1 903 DDHD1 "Uncharacterized protein 0.991 0.122 0.558 3.7e-28
MGI|MGI:2150302 Ddhd1 "DDHD domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 331 (121.6 bits), Expect = 1.8e-29, P = 1.8e-29
 Identities = 64/111 (57%), Positives = 79/111 (71%)

Query:     1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYF 60
             +G RL RGY ++A   D+P   SH+VFVVHG+GQKMD GRIIKN    RE+   +++K+F
Sbjct:    31 SGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAARKMEEKHF 90

Query:    61 ASSKLRAEFFPVEWRSSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYT 111
             ++     EF PVEWRS L LDGD V+SIT   V  LR MLN+SAMDIMYYT
Sbjct:    91 SNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYT 141




GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0005737 "cytoplasm" evidence=IEA
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0008150 "biological_process" evidence=ND
GO:0016042 "lipid catabolic process" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
RGD|1308576 Ddhd1 "DDHD domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0T5 DDHD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3N1K0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1C0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O46606 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LK98 DDHD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RE74 DDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NEL9 DDHD1 "Phospholipase DDHD1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFE1 DDHD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8NEL9DDHD1_HUMAN3, ., 1, ., 1, ., -0.55850.99100.1233yesN/A
Q80YA3DDHD1_MOUSE3, ., 1, ., 1, ., -0.57650.99100.2029yesN/A
O46606DDHD1_BOVIN3, ., 1, ., 1, ., -0.55850.99100.1268yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 112
KOG2308|consensus 741 99.94
KOG2308|consensus 741 91.33
>KOG2308|consensus Back     alignment and domain information
Probab=99.94  E-value=2e-27  Score=205.80  Aligned_cols=112  Identities=37%  Similarity=0.599  Sum_probs=103.4

Q ss_pred             CCceeccccCccCCCCCCCCCCCeEEEEEeCCCccCCchhHHHHhHHHHHHHHHHHHhcccC---CCCceEEEeeeec--
Q psy18230          1 TGYRLARGYKDQALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFAS---SKLRAEFFPVEWR--   75 (112)
Q Consensus         1 ~g~~l~RG~~~~~~~~d~~~~idHLVfvVHGIGq~~~~~~iv~~~~~~r~~~~~l~~~~~~~---~~~rvefLPI~Wr--   75 (112)
                      .|+.|+|+|.+++.+.+++.+++||||+||||||++..+++++|++.||....++.++|+.+   +..||+||||+||  
T Consensus       270 ~~~~l~~~~~ee~~~~~k~~~v~hllf~vhgig~~~~~~~i~~n~~~~r~~~~~~~~sh~~~~~~r~v~v~fLpv~w~~~  349 (741)
T KOG2308|consen  270 VGRGLRRFLEEENDLASKPVPVDHLLFVVHGIGQKMKDNSIIENVDSFRELPKALGESHLKNSSDRPVRVLFLPVEWRKG  349 (741)
T ss_pred             cccccchhhhhhccccCCCccchheeeeeeccccCccccchhhcchhHHHHHHHHHHhhhccccCCccceeEEEeeeeEc
Confidence            37789999999999999999999999999999999999999999999999999999999987   4557999999999  


Q ss_pred             cccccCCCccccccccchHHHHHHHhhhhhhhccccC
Q psy18230         76 SSLALDGDIVESITQLNVLNLRHMLNASAMDIMYYTD  112 (112)
Q Consensus        76 ~~l~~d~~~l~~ITl~~i~~lR~~~nd~~lDvl~Y~S  112 (112)
                      +....+...+++||+++|+.+|.|+|+|+||||||||
T Consensus       350 ~~~~~~~~~v~~Itl~~i~~~R~~lnst~lDilyY~S  386 (741)
T KOG2308|consen  350 GEKTEDVNFVDDITLDSIPRKRIFLNSTALDILYYMS  386 (741)
T ss_pred             cchhccccchhhcccccchhHHhhccchhhhhcccCC
Confidence            5555566789999999999999999999999999998



>KOG2308|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query112
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 21/94 (22%)

Query: 12  QALETDRPEDISHLVFVVHGMGQKMDSGRIIKNATQFRESVMWLKKKYFASSKLRAEF-F 70
           QAL   RP        ++ G+     SG   K          W+      S K++ +  F
Sbjct: 142 QALLELRPAKN----VLIDGVL---GSG---KT---------WVALDVCLSYKVQCKMDF 182

Query: 71  PVEWRSSLALDGDIVESITQLNVLNLRHMLNASA 104
            + W  +L         +  L  L  +   N ++
Sbjct: 183 KIFW-LNLKNCNSPETVLEMLQKLLYQIDPNWTS 215


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00