Psyllid ID: psy2083
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | 2.2.26 [Sep-21-2011] | |||||||
| Q6NVM6 | 686 | Nucleolar protein 10 OS=X | yes | N/A | 0.762 | 0.275 | 0.601 | 3e-67 | |
| Q802W4 | 722 | Nucleolar protein 10 OS=D | yes | N/A | 0.762 | 0.261 | 0.595 | 3e-67 | |
| Q7T0Q5 | 689 | Nucleolar protein 10 OS=X | N/A | N/A | 0.762 | 0.274 | 0.595 | 4e-67 | |
| Q5RJG1 | 687 | Nucleolar protein 10 OS=M | yes | N/A | 0.762 | 0.275 | 0.595 | 7e-65 | |
| Q66H99 | 688 | Nucleolar protein 10 OS=R | yes | N/A | 0.762 | 0.274 | 0.595 | 9e-65 | |
| Q9BSC4 | 688 | Nucleolar protein 10 OS=H | yes | N/A | 0.762 | 0.274 | 0.585 | 6e-64 | |
| O74879 | 634 | Ribosome biogenesis prote | yes | N/A | 0.762 | 0.298 | 0.467 | 3e-52 | |
| P48234 | 707 | Ribosome biogenesis prote | yes | N/A | 0.677 | 0.237 | 0.417 | 4e-40 |
| >sp|Q6NVM6|NOL10_XENTR Nucleolar protein 10 OS=Xenopus tropicalis GN=nol10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+++PL KDH YGLPI+ I+FH + V+S DS ++K+W+KDNG +FT IE +
Sbjct: 255 LYDLRSNRPLIAKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE K+ YYIP+LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 ADVNDVCLYPNSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR+EL++LGL HLIG+ LLRAYMHGFFMDIRLY K K++ PF +EE+KK+KIR++
Sbjct: 373 YKFVTRKELDELGLSHLIGSPLLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQ+ +
Sbjct: 433 IEEARAQRVQIKK 445
|
Xenopus tropicalis (taxid: 8364) |
| >sp|Q802W4|NOL10_DANRE Nucleolar protein 10 OS=Danio rerio GN=nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
+YD+R+ +PL VKDH YGLPI+ + FH+ + VLS DS ++K+W+KDNG +F+ IE Q
Sbjct: 255 VYDLRSSRPLLVKDHYYGLPIKSLHFHNSLDLVLSADSKIIKMWNKDNGKVFSSIEP--Q 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE+ K+ T+YIP+LGPAP+WC FLDNLTEELEEN +YDD
Sbjct: 313 ANINDVCLYPASGMLFTANEDPKMNTFYIPALGPAPRWCSFLDNLTEELEENPESTIYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR++LE LGL HLIG+ LLRAYMHGFFMDIRLY K K++ PF +EE++K KIR++
Sbjct: 373 YKFVTRKDLESLGLAHLIGSPLLRAYMHGFFMDIRLYHKVKTMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEESRAQRVQLKK 445
|
Danio rerio (taxid: 7955) |
| >sp|Q7T0Q5|NOL10_XENLA Nucleolar protein 10 OS=Xenopus laevis GN=nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 152/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+++P+ VKDH YGLPI+ I+FH + V+S DS ++K+W+KDNG +FT IE +
Sbjct: 255 LYDLRSNRPVIVKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE K+ YYIP+LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 ADVNDVCLYPNSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPENTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR+EL++LGL HLIG+ +LRAYMHGFFMDIRLY K K++ PF +EE+KK+KIR++
Sbjct: 373 YKFVTRKELDELGLSHLIGSPMLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQ+ +
Sbjct: 433 IEETRAQRVQIKK 445
|
Xenopus laevis (taxid: 8355) |
| >sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musculus GN=Nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 247 bits (630), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPSSGMLLTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
|
Mus musculus (taxid: 10090) |
| >sp|Q66H99|NOL10_RAT Nucleolar protein 10 OS=Rattus norvegicus GN=Nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (629), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPSSGMILTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q9BSC4|NOL10_HUMAN Nucleolar protein 10 OS=Homo sapiens GN=NOL10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 146/193 (75%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + +LS DS +VK+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIVKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
|
Homo sapiens (taxid: 9606) |
| >sp|O74879|NOL10_SCHPO Ribosome biogenesis protein enp2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=enp2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 8/197 (4%)
Query: 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------VLSMDSSVVKIWSKDNGSLFT 106
A LYD+R+ P KD Y +PI+ + + D+ VLS DS ++KIW KD G F+
Sbjct: 260 ATLLYDLRSSSPYMSKDQGYSMPIKSLHWMDSALDGTARVLSADSKIIKIWEKDTGKPFS 319
Query: 107 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI 166
IE + N++C I +G++ ANE + +YIPSL PAP+WC FLDN+TEE+EEN
Sbjct: 320 SIEP--TVELNDVCPIEGTGLILTANEGSPMHAFYIPSLNPAPRWCSFLDNITEEMEENP 377
Query: 167 IENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFK 226
+YDDYKFVT++EL +LGL HL+GT ++RAYMHGFF+D LY KA+ ++ PF +EE +
Sbjct: 378 APTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGFFIDNNLYEKARLIANPFSYEEHR 437
Query: 227 KKKIRERIEQERTRGVQ 243
+K ++ER+E++R ++
Sbjct: 438 QKIVKERLEKQRASKIR 454
|
May be involved in rRNA-processing and ribosome biosynthesis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P48234|NOL10_YEAST Ribosome biogenesis protein ENP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENP2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Query: 55 YLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSMDSSVVKIWSKDNGSLFTCIE 109
Y+YD+R +P +KD YG I+ I + DN +++ D + KIW + +G + +E
Sbjct: 253 YIYDLRTSEPSIIKDQGYGFDIKKIIWLDNVGTENKIVTCDKRIAKIWDRLDGKAYASME 312
Query: 110 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIEN 169
N++ H+P +GM F ANE+ + TYYIPSLGP+P+WC FLD++TEELEE +
Sbjct: 313 PS--VDINDIEHVPGTGMFFTANESIPMHTYYIPSLGPSPRWCSFLDSITEELEEKPSDT 370
Query: 170 VYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEE 224
VY +Y+F+TR +++ L L HL+G+ +LRAYMHGFF++ LY K ++ P +++
Sbjct: 371 VYSNYRFITRDDVKKLNLTHLVGSRVLRAYMHGFFINTELYDKVSLIANPDAYKD 425
|
May be involved in rRNA-processing and ribosome biosynthesis. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | ||||||
| 193627363 | 709 | PREDICTED: nucleolar protein 10-like [Ac | 0.770 | 0.269 | 0.722 | 3e-76 | |
| 270007790 | 674 | hypothetical protein TcasGA2_TC014492 [T | 0.762 | 0.280 | 0.694 | 2e-71 | |
| 242016127 | 672 | Nucleolar protein, putative [Pediculus h | 0.75 | 0.276 | 0.663 | 3e-71 | |
| 383851411 | 1287 | PREDICTED: nucleolar protein 10-like [Me | 0.862 | 0.166 | 0.556 | 2e-68 | |
| 405963250 | 676 | Nucleolar protein 10 [Crassostrea gigas] | 0.891 | 0.326 | 0.546 | 1e-67 | |
| 443721891 | 668 | hypothetical protein CAPTEDRAFT_120562, | 0.758 | 0.281 | 0.604 | 6e-66 | |
| 427785517 | 666 | Hypothetical protein [Rhipicephalus pulc | 0.75 | 0.279 | 0.594 | 8e-66 | |
| 348516082 | 713 | PREDICTED: nucleolar protein 10-like [Or | 0.762 | 0.265 | 0.601 | 2e-65 | |
| 47498014 | 686 | nucleolar protein 10 [Xenopus (Silurana) | 0.762 | 0.275 | 0.601 | 2e-65 | |
| 443692824 | 569 | hypothetical protein CAPTEDRAFT_145469 [ | 0.758 | 0.330 | 0.604 | 2e-65 |
| >gi|193627363|ref|XP_001951732.1| PREDICTED: nucleolar protein 10-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/191 (72%), Positives = 162/191 (84%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQ 115
LYD+R++KP RVKDH++GLPIRDI F D VLSMDSS VKIW+KD G LF +ESG+ TQ
Sbjct: 253 LYDLRSNKPFRVKDHLFGLPIRDIAFQDENVLSMDSSSVKIWNKDTGKLFAALESGNDTQ 312
Query: 116 FNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYK 175
FNNLC IP++GMMFIANEN KI T+YIPSLGPAPKWCGFLD L EELEE E VYDDYK
Sbjct: 313 FNNLCVIPQTGMMFIANENTKIQTHYIPSLGPAPKWCGFLDGLVEELEETKKETVYDDYK 372
Query: 176 FVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIE 235
FVTR ELE+LGL HLIGT+LL+AYMHG+F+DIRLYRKAKSV+ PF +EE+++KKIRE+I
Sbjct: 373 FVTRNELEELGLSHLIGTNLLKAYMHGYFVDIRLYRKAKSVAEPFAYEEYRRKKIREKIV 432
Query: 236 QERTRGVQLNE 246
ERT VQ+ +
Sbjct: 433 SERTNRVQVQK 443
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270007790|gb|EFA04238.1| hypothetical protein TcasGA2_TC014492 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 166/193 (86%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFH--DNYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYDIR++KP +KDHMYGLPI+D++FH + + SMDSSV+KIW K+NG LFT IE+
Sbjct: 255 LYDIRSNKPFCIKDHMYGLPIKDVEFHHQQDLIFSMDSSVLKIWDKNNGKLFTSIEAS-- 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
T+FNNLC +P++G+ FIANEN KI TYYIPSLGPAP+W FLD+LTEELEE+ EN+YDD
Sbjct: 313 TEFNNLCVVPKTGLFFIANENTKIQTYYIPSLGPAPRWASFLDSLTEELEESNSENIYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+QELE+LGL HLIGT+LLRAYMHG+FMD+RLY+KAKSV+ PFEFEE++KKKIRE
Sbjct: 373 YKFVTKQELENLGLDHLIGTNLLRAYMHGYFMDVRLYKKAKSVANPFEFEEYRKKKIRET 432
Query: 234 IEQERTRGVQLNE 246
IE+ER VQ+N+
Sbjct: 433 IEKERVNRVQVNK 445
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242016127|ref|XP_002428687.1| Nucleolar protein, putative [Pediculus humanus corporis] gi|212513358|gb|EEB15949.1| Nucleolar protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 161/190 (84%), Gaps = 4/190 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDN--YVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYDIRA+KP +KDH+YGLPI++I+F +N +V+SMDSSV+KIW K++G +FT IE +
Sbjct: 254 LYDIRANKPFFIKDHLYGLPIKNIEFENNHDFVMSMDSSVLKIWEKNSGKMFTSIEG--K 311
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
+ FN+LC + +GM+FIANEN KILTYYIPSLGPAP+WCGFLD+LTEELEE+ I +YDD
Sbjct: 312 SDFNDLCFVKNTGMLFIANENTKILTYYIPSLGPAPRWCGFLDSLTEELEESKINTIYDD 371
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+ EL DLGL HL+GT+LLRAYMHG+F+DIRLY+KAK++S PF FE+++KKKIRE
Sbjct: 372 YKFVTKAELADLGLSHLLGTTLLRAYMHGYFIDIRLYKKAKAISDPFAFEKYRKKKIREL 431
Query: 234 IEQERTRGVQ 243
IE ER V+
Sbjct: 432 IESERQNRVK 441
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383851411|ref|XP_003701226.1| PREDICTED: nucleolar protein 10-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 172/239 (71%), Gaps = 25/239 (10%)
Query: 16 CIESGDQTQFNNLCHIP-------ESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRV 67
C+E G N L IP + G+ F + +IL LYDIR++KP
Sbjct: 220 CVEQG-----NKLEAIPAVTSLKFQGGLTFGVGTSTGQIL--------LYDIRSNKPFLT 266
Query: 68 KDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125
KDHMYGLPI++I+FH + V SMDSS+VKIW ++NG L+T IE+ Q+ FN++C IP +
Sbjct: 267 KDHMYGLPIKNIEFHQKMDMVYSMDSSIVKIWDRNNGKLYTSIEA--QSDFNDMCVIPNT 324
Query: 126 GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDL 185
GM+ IANEN K+ TYYIPSLGPAP WC FLDNLTEE+EE E +YDDYKFVT +EL++L
Sbjct: 325 GMLLIANENTKMQTYYIPSLGPAPSWCSFLDNLTEEMEELNYEIIYDDYKFVTEKELDEL 384
Query: 186 GLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQL 244
GL HL GT+LLRAYMHG+FMDIRLYRKA+ V PFEF+E+KKK+I+++IE+ R +Q+
Sbjct: 385 GLLHLKGTNLLRAYMHGYFMDIRLYRKARDVMKPFEFQEYKKKRIQQKIEETRGSRIQI 443
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|405963250|gb|EKC28841.1| Nucleolar protein 10 [Crassostrea gigas] | Back alignment and taxonomy information |
|---|
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 167/225 (74%), Gaps = 4/225 (1%)
Query: 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83
QF ++ +P+ + + + LYDIR++KPL KDH Y LPI+ I+F D
Sbjct: 221 QFEDVHELPKVTALKFRDALNMAVGTSTGHILLYDIRSNKPLLAKDHHYELPIKSIEFQD 280
Query: 84 --NYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141
N VLSMDS ++K+W ++ G +T IE G T N+LC +P+SG++F+AN+++KIL+YY
Sbjct: 281 SLNLVLSMDSKILKLWDRETGKPYTSIEPG--TPLNDLCVLPKSGLLFMANDDQKILSYY 338
Query: 142 IPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMH 201
IP+LG APKWC FLDNLTEELEE+ + VYDDYKFVTR+ELE+LGL HLIG++LLRAYMH
Sbjct: 339 IPALGTAPKWCSFLDNLTEELEESTAQIVYDDYKFVTRKELEELGLAHLIGSTLLRAYMH 398
Query: 202 GFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNE 246
GFFMD RLY KAK+++ PF +E+++K KIRE+IEQER V+L +
Sbjct: 399 GFFMDNRLYNKAKTIAEPFAYEDYRKSKIREKIEQERANRVRLKK 443
|
Source: Crassostrea gigas Species: Crassostrea gigas Genus: Crassostrea Family: Ostreidae Order: Ostreoida Class: Bivalvia Phylum: Mollusca Superkingdom: Eukaryota |
| >gi|443721891|gb|ELU11016.1| hypothetical protein CAPTEDRAFT_120562, partial [Capitella teleta] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 150/192 (78%), Gaps = 4/192 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDN--YVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R++KP VKDH YGLPI+ + FHD+ VLS DS ++KIW KD+G FT IE G
Sbjct: 237 LYDLRSNKPFLVKDHNYGLPIKKVVFHDSSRLVLSQDSRILKIWEKDSGKAFTSIEPG-- 294
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N+LC +P SG++F+ NE+ KIL+YYIPSLGPAPKWC FLD+LTEE+EEN VYDD
Sbjct: 295 VNLNDLCVLPNSGLLFMTNESPKILSYYIPSLGPAPKWCSFLDSLTEEMEENPAPTVYDD 354
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR EL+ LGL HLIG+ +LR YMHG+F+D+RLY KAKS++ PF ++E +KKKI+E+
Sbjct: 355 YKFVTRTELDGLGLTHLIGSKMLRGYMHGYFLDVRLYHKAKSLTEPFAYDEHRKKKIQEK 414
Query: 234 IEQERTRGVQLN 245
I++ R VQ+N
Sbjct: 415 IDETRQSRVQVN 426
|
Source: Capitella teleta Species: Capitella teleta Genus: Capitella Family: Capitellidae Order: Capitellida Class: Polychaeta Phylum: Annelida Superkingdom: Eukaryota |
| >gi|427785517|gb|JAA58210.1| Hypothetical protein [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
L+DIR+DKPL VKDH+YGLP++ + FH N V+SMDS V+K+W +G FT + G
Sbjct: 255 LFDIRSDKPLLVKDHLYGLPVKKVAFHSDANVVMSMDSKVLKLWDATSGKAFTSVTPG-- 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N+LC + SG+ F+ANE+KK+L+YYIPSLGPAP+WC FLDNLTEELEE + VYDD
Sbjct: 313 VDLNDLCLVGNSGLFFLANEDKKVLSYYIPSLGPAPRWCSFLDNLTEELEETHQDTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT++ELE+LGLGHL+GT+LLRAYMHG+F+D+RLY KAK+++ PF ++E++KKKIR+
Sbjct: 373 YKFVTQKELENLGLGHLVGTNLLRAYMHGYFLDMRLYHKAKALAQPFAYDEYRKKKIRDT 432
Query: 234 IEQERTRGVQ 243
+E R V+
Sbjct: 433 VEAARKNRVE 442
|
Source: Rhipicephalus pulchellus Species: Rhipicephalus pulchellus Genus: Rhipicephalus Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|348516082|ref|XP_003445568.1| PREDICTED: nucleolar protein 10-like [Oreochromis niloticus] | Back alignment and taxonomy information |
|---|
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+ +PL VKDH+Y LPI + FH+ + V+S DS ++KIW+KD G LF+ ++ Q
Sbjct: 255 LYDLRSSQPLLVKDHLYNLPINSLNFHNQLDLVVSSDSKIIKIWNKDTGKLFSSVQP--Q 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
T N++C P SGM+F ANE+ K+ T+YIP+LGPAP+WC FLDNLTEELEE+ VYDD
Sbjct: 313 TNINSVCVYPNSGMLFTANEDPKMNTFYIPALGPAPRWCSFLDNLTEELEESPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR++LE+LGL HLIG+SLLRAYMHGFFMDIRLY K KS+ PF +EE++K KIR++
Sbjct: 373 YKFVTRKDLENLGLSHLIGSSLLRAYMHGFFMDIRLYHKVKSMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ RT+ VQ+ +
Sbjct: 433 IEEARTQRVQVKK 445
|
Source: Oreochromis niloticus Species: Oreochromis niloticus Genus: Oreochromis Family: Cichlidae Order: Perciformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|47498014|ref|NP_998842.1| nucleolar protein 10 [Xenopus (Silurana) tropicalis] gi|73921235|sp|Q6NVM6.1|NOL10_XENTR RecName: Full=Nucleolar protein 10 gi|45709729|gb|AAH67979.1| nucleolar protein 10 [Xenopus (Silurana) tropicalis] | Back alignment and taxonomy information |
|---|
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+++PL KDH YGLPI+ I+FH + V+S DS ++K+W+KDNG +FT IE +
Sbjct: 255 LYDLRSNRPLIAKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE K+ YYIP+LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 ADVNDVCLYPNSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR+EL++LGL HLIG+ LLRAYMHGFFMDIRLY K K++ PF +EE+KK+KIR++
Sbjct: 373 YKFVTRKELDELGLSHLIGSPLLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQ+ +
Sbjct: 433 IEEARAQRVQIKK 445
|
Source: Xenopus (Silurana) tropicalis Species: Xenopus (Silurana) tropicalis Genus: Xenopus Family: Pipidae Order: Anura Class: Amphibia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|443692824|gb|ELT94330.1| hypothetical protein CAPTEDRAFT_145469 [Capitella teleta] | Back alignment and taxonomy information |
|---|
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 150/192 (78%), Gaps = 4/192 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDN--YVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R++KP VKDH YGLPI+ + FHD+ VLS DS ++KIW KD+G FT IE G
Sbjct: 255 LYDLRSNKPFLVKDHNYGLPIKKVVFHDSSRLVLSQDSRILKIWEKDSGKAFTSIEPG-- 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N+LC +P SG++F+ NE+ KIL+YYIPSLGPAPKWC FLD+LTEE+EEN VYDD
Sbjct: 313 VNLNDLCVLPNSGLLFMTNESPKILSYYIPSLGPAPKWCSFLDSLTEEMEENPAPTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR EL+ LGL HLIG+ +LR YMHG+F+D+RLY KAKS++ PF ++E +KKKI+E+
Sbjct: 373 YKFVTRTELDGLGLTHLIGSKMLRGYMHGYFLDVRLYHKAKSLTEPFAYDEHRKKKIQEK 432
Query: 234 IEQERTRGVQLN 245
I++ R VQ+N
Sbjct: 433 IDETRQSRVQVN 444
|
Source: Capitella teleta Species: Capitella teleta Genus: Capitella Family: Capitellidae Order: Capitellida Class: Polychaeta Phylum: Annelida Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 248 | ||||||
| ZFIN|ZDB-GENE-040426-764 | 722 | nol10 "nucleolar protein 10" [ | 0.653 | 0.224 | 0.560 | 5.2e-49 | |
| MGI|MGI:2684913 | 687 | Nol10 "nucleolar protein 10" [ | 0.653 | 0.235 | 0.560 | 3.3e-47 | |
| RGD|1359447 | 688 | Nol10 "nucleolar protein 10" [ | 0.653 | 0.235 | 0.560 | 4.2e-47 | |
| UNIPROTKB|E1BXP3 | 688 | NOL10 "Uncharacterized protein | 0.653 | 0.235 | 0.554 | 6.9e-47 | |
| UNIPROTKB|F5H6G7 | 638 | NOL10 "Nucleolar protein 10" [ | 0.653 | 0.253 | 0.548 | 1.8e-46 | |
| UNIPROTKB|Q9BSC4 | 688 | NOL10 "Nucleolar protein 10" [ | 0.653 | 0.235 | 0.548 | 1.8e-46 | |
| UNIPROTKB|F1SAA1 | 688 | NOL10 "Uncharacterized protein | 0.653 | 0.235 | 0.542 | 1.8e-46 | |
| UNIPROTKB|E2R1X1 | 688 | NOL10 "Uncharacterized protein | 0.653 | 0.235 | 0.542 | 2.3e-46 | |
| UNIPROTKB|E1BKR4 | 688 | NOL10 "Uncharacterized protein | 0.653 | 0.235 | 0.542 | 3.8e-46 | |
| FB|FBgn0261535 | 721 | l(2)34Fd "lethal (2) 34Fd" [Dr | 0.653 | 0.224 | 0.475 | 2.3e-41 |
| ZFIN|ZDB-GENE-040426-764 nol10 "nucleolar protein 10" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 93/166 (56%), Positives = 121/166 (72%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
+YD+R+ +PL VKDH YGLPI+ + FH++ VLS DS ++K+W+KDNG +F+ IE Q
Sbjct: 255 VYDLRSSRPLLVKDHYYGLPIKSLHFHNSLDLVLSADSKIIKMWNKDNGKVFSSIEP--Q 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+F ANE+ K+ T+YIP+LGPAP+WC FLD +YDD
Sbjct: 313 ANINDVCLYPASGMLFTANEDPKMNTFYIPALGPAPRWCSFLDNLTEELEENPESTIYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVTR++LE LGL HLIG+ LLRAYMHGFFMDIRLY K K++ P
Sbjct: 373 YKFVTRKDLESLGLAHLIGSPLLRAYMHGFFMDIRLYHKVKTMVNP 418
|
|
| MGI|MGI:2684913 Nol10 "nucleolar protein 10" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 93/166 (56%), Positives = 117/166 (70%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDLNDVCLYPSSGMLLTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 418
|
|
| RGD|1359447 Nol10 "nucleolar protein 10" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 93/166 (56%), Positives = 117/166 (70%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDLNDVCLYPSSGMILTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 418
|
|
| UNIPROTKB|E1BXP3 NOL10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 92/166 (55%), Positives = 118/166 (71%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKF-HD-NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+ PL VKDH YGLPI+ I+F H + ++S DS ++K+W+KD G +FT +E +
Sbjct: 255 LYDLRSSNPLIVKDHQYGLPIKSIQFQHQLDLIISADSRIIKMWNKDTGKIFTSMEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE ++ YY+P LGPAPKWC FLD VYDD
Sbjct: 313 YDINDVCLYPNSGMLMTANEAPRMNIYYMPVLGPAPKWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVTR++LE+LGL HLIG+SLLRAYMHGFFMDIRLY KAK ++ P
Sbjct: 373 YKFVTRKDLENLGLAHLIGSSLLRAYMHGFFMDIRLYHKAKMMANP 418
|
|
| UNIPROTKB|F5H6G7 NOL10 "Nucleolar protein 10" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 91/166 (54%), Positives = 116/166 (69%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ +LS DS +VK+W+K++G +FT +E +
Sbjct: 205 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIVKMWNKNSGKIFTSLEP--E 262
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 263 HDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 322
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 323 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 368
|
|
| UNIPROTKB|Q9BSC4 NOL10 "Nucleolar protein 10" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 91/166 (54%), Positives = 116/166 (69%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ +LS DS +VK+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIVKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 418
|
|
| UNIPROTKB|F1SAA1 NOL10 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 90/166 (54%), Positives = 117/166 (70%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ +LS DS ++K+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIIKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDINDVCLYPNSGMLLTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 418
|
|
| UNIPROTKB|E2R1X1 NOL10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 90/166 (54%), Positives = 116/166 (69%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ +LS DS ++K+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIIKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDINDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP 418
|
|
| UNIPROTKB|E1BKR4 NOL10 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 90/166 (54%), Positives = 116/166 (69%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D+ +LS DS ++K+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIIKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLD VYDD
Sbjct: 313 HDLNDVCLYPSSGMLLTANEAPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + P
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMLNP 418
|
|
| FB|FBgn0261535 l(2)34Fd "lethal (2) 34Fd" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 79/166 (47%), Positives = 114/166 (68%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFH--DNYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
+YDIRA +PL VK+H+ LPI+ + F+ N V S+D + +K+W + G +ES
Sbjct: 251 IYDIRAKQPLLVKNHLNRLPIKRLAFNPAQNAVYSLDEATLKLWDEQTGKQIAYVES--T 308
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDXXXXXXXXXXXXXVYDD 173
+ FN+ C IP++GM F+A E+ K++TYY+P++GPAP+WC FLD VYDD
Sbjct: 309 SSFNDFCTIPDTGMFFVAQEDVKMMTYYVPAMGPAPRWCSFLDNLTEEIESEVVENVYDD 368
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP 219
Y+FVT +EL +LG+ HL+G++LL+ YMHG+FMD RLY KAK+V P
Sbjct: 369 YQFVTAKELAELGMEHLVGSNLLKGYMHGYFMDARLYNKAKAVVEP 414
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6NVM6 | NOL10_XENTR | No assigned EC number | 0.6010 | 0.7620 | 0.2755 | yes | N/A |
| Q802W4 | NOL10_DANRE | No assigned EC number | 0.5958 | 0.7620 | 0.2617 | yes | N/A |
| Q66H99 | NOL10_RAT | No assigned EC number | 0.5958 | 0.7620 | 0.2747 | yes | N/A |
| Q9BSC4 | NOL10_HUMAN | No assigned EC number | 0.5854 | 0.7620 | 0.2747 | yes | N/A |
| Q5RJG1 | NOL10_MOUSE | No assigned EC number | 0.5958 | 0.7620 | 0.2751 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
No hit with e-value below 0.005
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| KOG2321|consensus | 703 | 100.0 | ||
| KOG0282|consensus | 503 | 99.82 | ||
| KOG0315|consensus | 311 | 99.76 | ||
| KOG0286|consensus | 343 | 99.74 | ||
| KOG0263|consensus | 707 | 99.72 | ||
| KOG0272|consensus | 459 | 99.72 | ||
| KOG0272|consensus | 459 | 99.71 | ||
| KOG0263|consensus | 707 | 99.71 | ||
| KOG0266|consensus | 456 | 99.71 | ||
| KOG0279|consensus | 315 | 99.7 | ||
| KOG0286|consensus | 343 | 99.7 | ||
| KOG0266|consensus | 456 | 99.7 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.69 | |
| KOG0271|consensus | 480 | 99.68 | ||
| KOG0315|consensus | 311 | 99.68 | ||
| KOG0279|consensus | 315 | 99.66 | ||
| KOG0284|consensus | 464 | 99.65 | ||
| KOG0291|consensus | 893 | 99.64 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.63 | |
| KOG0276|consensus | 794 | 99.63 | ||
| KOG0302|consensus | 440 | 99.61 | ||
| KOG0310|consensus | 487 | 99.6 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.6 | |
| KOG0265|consensus | 338 | 99.59 | ||
| KOG0271|consensus | 480 | 99.57 | ||
| KOG0273|consensus | 524 | 99.55 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.55 | |
| PTZ00421 | 493 | coronin; Provisional | 99.55 | |
| KOG0278|consensus | 334 | 99.55 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.53 | |
| KOG0264|consensus | 422 | 99.53 | ||
| KOG0292|consensus | 1202 | 99.53 | ||
| KOG0289|consensus | 506 | 99.49 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.49 | |
| KOG0285|consensus | 460 | 99.49 | ||
| KOG0289|consensus | 506 | 99.49 | ||
| KOG0282|consensus | 503 | 99.49 | ||
| KOG0278|consensus | 334 | 99.48 | ||
| KOG1446|consensus | 311 | 99.48 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.47 | |
| KOG0295|consensus | 406 | 99.47 | ||
| KOG0283|consensus | 712 | 99.47 | ||
| KOG0285|consensus | 460 | 99.47 | ||
| KOG0316|consensus | 307 | 99.47 | ||
| KOG0319|consensus | 775 | 99.46 | ||
| KOG0316|consensus | 307 | 99.46 | ||
| KOG0319|consensus | 775 | 99.44 | ||
| KOG0276|consensus | 794 | 99.43 | ||
| KOG0275|consensus | 508 | 99.42 | ||
| KOG0296|consensus | 399 | 99.42 | ||
| KOG0645|consensus | 312 | 99.42 | ||
| KOG0291|consensus | 893 | 99.42 | ||
| KOG0318|consensus | 603 | 99.41 | ||
| KOG0265|consensus | 338 | 99.41 | ||
| KOG0643|consensus | 327 | 99.41 | ||
| KOG0647|consensus | 347 | 99.4 | ||
| KOG0277|consensus | 311 | 99.39 | ||
| KOG0300|consensus | 481 | 99.39 | ||
| KOG0273|consensus | 524 | 99.38 | ||
| KOG0294|consensus | 362 | 99.38 | ||
| KOG0295|consensus | 406 | 99.37 | ||
| KOG0640|consensus | 430 | 99.37 | ||
| KOG0274|consensus | 537 | 99.36 | ||
| KOG0645|consensus | 312 | 99.36 | ||
| KOG0281|consensus | 499 | 99.36 | ||
| KOG0274|consensus | 537 | 99.36 | ||
| KOG0772|consensus | 641 | 99.35 | ||
| KOG0641|consensus | 350 | 99.35 | ||
| KOG0313|consensus | 423 | 99.34 | ||
| KOG0283|consensus | 712 | 99.33 | ||
| KOG0264|consensus | 422 | 99.33 | ||
| KOG0277|consensus | 311 | 99.32 | ||
| KOG0646|consensus | 476 | 99.31 | ||
| KOG0643|consensus | 327 | 99.31 | ||
| KOG0269|consensus | 839 | 99.31 | ||
| KOG0310|consensus | 487 | 99.3 | ||
| KOG0292|consensus | 1202 | 99.3 | ||
| KOG0313|consensus | 423 | 99.29 | ||
| KOG1539|consensus | 910 | 99.29 | ||
| KOG0281|consensus | 499 | 99.29 | ||
| KOG0284|consensus | 464 | 99.25 | ||
| KOG0303|consensus | 472 | 99.24 | ||
| KOG0296|consensus | 399 | 99.24 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.22 | |
| KOG0772|consensus | 641 | 99.21 | ||
| KOG0305|consensus | 484 | 99.21 | ||
| KOG0640|consensus | 430 | 99.21 | ||
| KOG0275|consensus | 508 | 99.19 | ||
| KOG1188|consensus | 376 | 99.19 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.19 | |
| KOG0267|consensus | 825 | 99.19 | ||
| KOG0300|consensus | 481 | 99.18 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.18 | |
| KOG0293|consensus | 519 | 99.18 | ||
| KOG1446|consensus | 311 | 99.16 | ||
| KOG0301|consensus | 745 | 99.15 | ||
| KOG0269|consensus | 839 | 99.15 | ||
| KOG1036|consensus | 323 | 99.15 | ||
| KOG0293|consensus | 519 | 99.14 | ||
| KOG0647|consensus | 347 | 99.14 | ||
| KOG0308|consensus | 735 | 99.14 | ||
| KOG0268|consensus | 433 | 99.14 | ||
| KOG0270|consensus | 463 | 99.13 | ||
| KOG0301|consensus | 745 | 99.12 | ||
| KOG0305|consensus | 484 | 99.12 | ||
| KOG1036|consensus | 323 | 99.12 | ||
| KOG0318|consensus | 603 | 99.11 | ||
| KOG0267|consensus | 825 | 99.11 | ||
| KOG4378|consensus | 673 | 99.09 | ||
| KOG0306|consensus | 888 | 99.09 | ||
| KOG0973|consensus | 942 | 99.09 | ||
| KOG0973|consensus | 942 | 99.08 | ||
| KOG0288|consensus | 459 | 99.08 | ||
| KOG2445|consensus | 361 | 99.08 | ||
| KOG0299|consensus | 479 | 99.07 | ||
| KOG2096|consensus | 420 | 99.07 | ||
| KOG2055|consensus | 514 | 99.07 | ||
| KOG0306|consensus | 888 | 99.06 | ||
| KOG0288|consensus | 459 | 99.06 | ||
| KOG1007|consensus | 370 | 99.05 | ||
| KOG1407|consensus | 313 | 99.03 | ||
| KOG1034|consensus | 385 | 99.02 | ||
| KOG1407|consensus | 313 | 99.02 | ||
| KOG1274|consensus | 933 | 99.01 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 98.98 | |
| KOG2110|consensus | 391 | 98.98 | ||
| KOG0639|consensus | 705 | 98.97 | ||
| KOG1445|consensus | 1012 | 98.97 | ||
| KOG1310|consensus | 758 | 98.96 | ||
| KOG1445|consensus | 1012 | 98.95 | ||
| KOG0270|consensus | 463 | 98.95 | ||
| KOG1272|consensus | 545 | 98.94 | ||
| KOG0302|consensus | 440 | 98.92 | ||
| KOG4328|consensus | 498 | 98.91 | ||
| KOG1539|consensus | 910 | 98.91 | ||
| KOG0290|consensus | 364 | 98.9 | ||
| KOG1273|consensus | 405 | 98.9 | ||
| KOG0646|consensus | 476 | 98.89 | ||
| KOG4283|consensus | 397 | 98.88 | ||
| KOG0268|consensus | 433 | 98.88 | ||
| KOG0307|consensus | 1049 | 98.86 | ||
| KOG4283|consensus | 397 | 98.85 | ||
| KOG0299|consensus | 479 | 98.85 | ||
| KOG2111|consensus | 346 | 98.84 | ||
| KOG0649|consensus | 325 | 98.83 | ||
| KOG0308|consensus | 735 | 98.83 | ||
| KOG1273|consensus | 405 | 98.82 | ||
| KOG1332|consensus | 299 | 98.82 | ||
| KOG0641|consensus | 350 | 98.81 | ||
| KOG2048|consensus | 691 | 98.8 | ||
| KOG2110|consensus | 391 | 98.79 | ||
| KOG4378|consensus | 673 | 98.77 | ||
| KOG2048|consensus | 691 | 98.76 | ||
| KOG4328|consensus | 498 | 98.75 | ||
| KOG0321|consensus | 720 | 98.75 | ||
| KOG0322|consensus | 323 | 98.75 | ||
| KOG0294|consensus | 362 | 98.73 | ||
| KOG2106|consensus | 626 | 98.71 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 98.71 | |
| KOG0303|consensus | 472 | 98.71 | ||
| KOG1408|consensus | 1080 | 98.69 | ||
| KOG1274|consensus | 933 | 98.68 | ||
| KOG0307|consensus | 1049 | 98.68 | ||
| KOG4227|consensus | 609 | 98.66 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.63 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.63 | |
| KOG2394|consensus | 636 | 98.62 | ||
| KOG1009|consensus | 434 | 98.62 | ||
| KOG2096|consensus | 420 | 98.6 | ||
| KOG1063|consensus | 764 | 98.59 | ||
| KOG0321|consensus | 720 | 98.59 | ||
| KOG1009|consensus | 434 | 98.59 | ||
| KOG0639|consensus | 705 | 98.58 | ||
| KOG0649|consensus | 325 | 98.57 | ||
| KOG1034|consensus | 385 | 98.56 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.56 | |
| KOG1063|consensus | 764 | 98.54 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.54 | |
| KOG2055|consensus | 514 | 98.54 | ||
| KOG3881|consensus | 412 | 98.53 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.52 | |
| KOG2919|consensus | 406 | 98.51 | ||
| KOG1332|consensus | 299 | 98.49 | ||
| KOG0974|consensus | 967 | 98.47 | ||
| KOG0771|consensus | 398 | 98.45 | ||
| KOG0642|consensus | 577 | 98.43 | ||
| KOG1408|consensus | 1080 | 98.42 | ||
| KOG1007|consensus | 370 | 98.42 | ||
| KOG2919|consensus | 406 | 98.42 | ||
| KOG2106|consensus | 626 | 98.42 | ||
| KOG4547|consensus | 541 | 98.4 | ||
| KOG1272|consensus | 545 | 98.38 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.3 | |
| KOG4227|consensus | 609 | 98.28 | ||
| KOG2139|consensus | 445 | 98.28 | ||
| KOG1240|consensus | 1431 | 98.27 | ||
| KOG0290|consensus | 364 | 98.27 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.26 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.26 | |
| KOG2394|consensus | 636 | 98.25 | ||
| KOG1188|consensus | 376 | 98.24 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.22 | |
| KOG2321|consensus | 703 | 98.21 | ||
| KOG1587|consensus | 555 | 98.2 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.19 | |
| KOG1517|consensus | 1387 | 98.18 | ||
| KOG1587|consensus | 555 | 98.18 | ||
| KOG2695|consensus | 425 | 98.13 | ||
| KOG0644|consensus | 1113 | 98.13 | ||
| KOG1538|consensus | 1081 | 98.11 | ||
| KOG1524|consensus | 737 | 98.11 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.1 | |
| KOG0642|consensus | 577 | 98.1 | ||
| KOG2139|consensus | 445 | 98.09 | ||
| KOG2445|consensus | 361 | 98.09 | ||
| KOG0644|consensus | 1113 | 98.09 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.08 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.07 | |
| KOG0771|consensus | 398 | 98.03 | ||
| KOG0650|consensus | 733 | 98.01 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.01 | |
| KOG1517|consensus | 1387 | 97.99 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 97.99 | |
| KOG1538|consensus | 1081 | 97.98 | ||
| KOG0974|consensus | 967 | 97.98 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 97.97 | |
| KOG3914|consensus | 390 | 97.91 | ||
| KOG2315|consensus | 566 | 97.91 | ||
| KOG1310|consensus | 758 | 97.89 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 97.89 | |
| KOG1963|consensus | 792 | 97.87 | ||
| KOG0309|consensus | 1081 | 97.85 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 97.84 | |
| KOG1523|consensus | 361 | 97.84 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 97.84 | |
| KOG4714|consensus | 319 | 97.79 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 97.79 | |
| KOG1240|consensus | 1431 | 97.78 | ||
| KOG1334|consensus | 559 | 97.78 | ||
| KOG0650|consensus | 733 | 97.78 | ||
| KOG1524|consensus | 737 | 97.77 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.77 | |
| KOG3914|consensus | 390 | 97.72 | ||
| KOG4547|consensus | 541 | 97.7 | ||
| KOG1334|consensus | 559 | 97.7 | ||
| KOG2111|consensus | 346 | 97.63 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.6 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 97.59 | |
| KOG0322|consensus | 323 | 97.59 | ||
| KOG3617|consensus | 1416 | 97.57 | ||
| KOG1354|consensus | 433 | 97.51 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.48 | |
| KOG3881|consensus | 412 | 97.48 | ||
| KOG1064|consensus | 2439 | 97.47 | ||
| KOG4714|consensus | 319 | 97.46 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 97.45 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.43 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 97.38 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.38 | |
| KOG1963|consensus | 792 | 97.36 | ||
| KOG4190|consensus | 1034 | 97.33 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.32 | |
| KOG2695|consensus | 425 | 97.3 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.29 | |
| KOG1523|consensus | 361 | 97.27 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.27 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.24 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.18 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.17 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 97.12 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.09 | |
| KOG1645|consensus | 463 | 97.07 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.06 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.02 | |
| KOG1409|consensus | 404 | 96.99 | ||
| KOG1354|consensus | 433 | 96.99 | ||
| KOG4532|consensus | 344 | 96.97 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 96.96 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.95 | |
| KOG1912|consensus | 1062 | 96.93 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 96.92 | |
| KOG4497|consensus | 447 | 96.88 | ||
| KOG2079|consensus | 1206 | 96.87 | ||
| KOG4497|consensus | 447 | 96.87 | ||
| KOG4532|consensus | 344 | 96.83 | ||
| KOG0280|consensus | 339 | 96.82 | ||
| KOG0882|consensus | 558 | 96.74 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.73 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.73 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 96.62 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.54 | |
| KOG2315|consensus | 566 | 96.54 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.51 | |
| KOG0309|consensus | 1081 | 96.42 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.41 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.35 | |
| KOG1645|consensus | 463 | 96.34 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.33 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.21 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 96.16 | |
| KOG2066|consensus | 846 | 96.14 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 96.13 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.12 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 96.07 | |
| KOG1275|consensus | 1118 | 96.03 | ||
| KOG1912|consensus | 1062 | 95.86 | ||
| KOG1008|consensus | 783 | 95.86 | ||
| KOG1409|consensus | 404 | 95.78 | ||
| KOG0280|consensus | 339 | 95.73 | ||
| KOG1832|consensus | 1516 | 95.67 | ||
| KOG2395|consensus | 644 | 95.59 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 95.55 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 95.53 | |
| KOG1064|consensus | 2439 | 95.46 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 95.0 | |
| KOG2314|consensus | 698 | 94.99 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 94.92 | |
| KOG2041|consensus | 1189 | 94.91 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 94.74 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 94.6 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 94.32 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.22 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 94.17 | |
| KOG3621|consensus | 726 | 94.01 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 94.01 | |
| KOG2395|consensus | 644 | 93.94 | ||
| KOG2066|consensus | 846 | 93.75 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 93.29 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 92.96 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 92.92 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 92.74 | |
| KOG2314|consensus | 698 | 92.7 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 92.63 | |
| KOG1832|consensus | 1516 | 91.97 | ||
| KOG4640|consensus | 665 | 91.93 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 91.88 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 91.87 | |
| KOG1008|consensus | 783 | 91.77 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 91.74 | |
| KOG4190|consensus | 1034 | 91.56 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 91.48 | |
| KOG2114|consensus | 933 | 91.16 | ||
| KOG4640|consensus | 665 | 91.08 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 90.92 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 90.92 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 90.82 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 90.48 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 90.36 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 90.12 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 89.88 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 89.32 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 89.3 | |
| KOG2079|consensus | 1206 | 89.25 | ||
| KOG4649|consensus | 354 | 89.1 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 88.76 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 88.74 | |
| KOG2114|consensus | 933 | 88.22 | ||
| KOG1275|consensus | 1118 | 87.99 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 87.79 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 87.75 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 87.69 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 86.48 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 86.36 | |
| KOG2041|consensus | 1189 | 85.66 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 85.39 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 85.01 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 84.16 | |
| KOG1920|consensus | 1265 | 84.0 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 83.94 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 83.93 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 83.77 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 83.4 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 82.75 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 82.64 | |
| KOG2444|consensus | 238 | 82.62 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 80.72 |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-76 Score=555.20 Aligned_cols=211 Identities=52% Similarity=0.957 Sum_probs=201.0
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKD 100 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~ 100 (248)
|+++.|.+ +|+-+++|... |.|.|||||+++|+.+++|+|+.||+.+.|.+.. |+|+|.+++||||..
T Consensus 231 vTal~F~d-~gL~~aVGts~-------G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~ 302 (703)
T KOG2321|consen 231 VTALKFRD-DGLHVAVGTST-------GSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDEC 302 (703)
T ss_pred ceEEEecC-CceeEEeeccC-------CcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccc
Confidence 66666655 58877776664 6999999999999999999999999999998763 999999999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeecHh
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQ 180 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt~~ 180 (248)
+|++.+++++ ..+||++|+.|++||+|+|++++.|+.||||+|||||+||||||||||||||.+.++|||||||||++
T Consensus 303 ~Gk~~asiEp--t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LGPaPrWCSfLdnlTEElEE~~~~TVYDnYkFvTkk 380 (703)
T KOG2321|consen 303 TGKPMASIEP--TSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLGPAPRWCSFLDNLTEELEENPETTVYDNYKFVTKK 380 (703)
T ss_pred cCCceeeccc--cCCcCceeeecCCceEEEecCCCcceeEEccccCCCchhhhHHHhHHHHHhcCCccccccceeeeeHH
Confidence 9999999999 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccCCCcccccceeeeechhhHHHHhhhcCChhhHHHHHHHHHHHHHHHhhcCcccc
Q psy2083 181 ELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLN 245 (248)
Q Consensus 181 ~l~~l~~~~ligt~~l~~ymhgyf~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 245 (248)
||++|||+|||||++|||||||||||.+||+||++++|||||++||+++||++||++|++||+.+
T Consensus 381 dL~~LgLthLiGt~vLrAyMHGyFid~~LY~Ka~~v~~PFAye~yr~~kir~~iE~eR~sri~~k 445 (703)
T KOG2321|consen 381 DLEKLGLTHLIGTNVLRAYMHGYFIDARLYNKAKLVVNPFAYEDYRERKIREKIEEERESRIQKK 445 (703)
T ss_pred HHHhcCCcceeCchHHHHHhhhhhhhHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999987
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-20 Score=176.35 Aligned_cols=194 Identities=16% Similarity=0.268 Sum_probs=159.3
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
.+.++.+| ...|+.+.|||-.+.|+.+++-+ |.|+||+++. ++.+.++. +|..||++++|++++ +.+
T Consensus 206 ~~~~~~gH-~kgvsai~~fp~~~hLlLS~gmD-------~~vklW~vy~~~~~lrtf~-gH~k~Vrd~~~s~~g~~fLS~ 276 (503)
T KOG0282|consen 206 LSHNLSGH-TKGVSAIQWFPKKGHLLLSGGMD-------GLVKLWNVYDDRRCLRTFK-GHRKPVRDASFNNCGTSFLSA 276 (503)
T ss_pred heeeccCC-ccccchhhhccceeeEEEecCCC-------ceEEEEEEecCcceehhhh-cchhhhhhhhccccCCeeeee
Confidence 45555565 89999999999888877665554 4999999999 56677663 455999999999998 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc--
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-- 165 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-- 165 (248)
|-|+.||+||.+||+++..++. ...++++.|.||+ +++++|+.|++|..|||.. -.|++|+.++
T Consensus 277 sfD~~lKlwDtETG~~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs-----------~kvvqeYd~hLg 343 (503)
T KOG0282|consen 277 SFDRFLKLWDTETGQVLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS-----------GKVVQEYDRHLG 343 (503)
T ss_pred ecceeeeeeccccceEEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEeccc-----------hHHHHHHHhhhh
Confidence 6899999999999999999998 6889999999999 9999999999999999975 2399999998
Q ss_pred ---ccccccCCceeecHhHHhhcCCcc-ccCC---Ccccccce-----------eeeechhhHHHHhhhcCChhhHHHHH
Q psy2083 166 ---IIENVYDDYKFVTRQELEDLGLGH-LIGT---SLLRAYMH-----------GFFMDIRLYRKAKSVSAPFEFEEFKK 227 (248)
Q Consensus 166 ---~~~~~yd~y~fvt~~~l~~l~~~~-ligt---~~l~~ymh-----------gyf~~~~ly~~~~~~~~~~~~~~~~~ 227 (248)
..+++-++-+|||..|...+.+|+ -|++ .-+.+-|| +||+.+.|.|.+..++.-..|...||
T Consensus 344 ~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkk 423 (503)
T KOG0282|consen 344 AILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKK 423 (503)
T ss_pred heeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHh
Confidence 467888999999999999999987 6775 34566677 89999999999887764434444444
Q ss_pred H
Q psy2083 228 K 228 (248)
Q Consensus 228 ~ 228 (248)
|
T Consensus 424 K 424 (503)
T KOG0282|consen 424 K 424 (503)
T ss_pred h
Confidence 4
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.7e-18 Score=147.88 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=114.0
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+.+|+|..+|.+. .+.||.+...|+.+.|+++|.. +|||||+++++ |+.+++ +|...|.+|.|+.++
T Consensus 27 a~tG~C~rTiqh~-dsqVNrLeiTpdk~~LAaa~~q---------hvRlyD~~S~np~Pv~t~e-~h~kNVtaVgF~~dg 95 (311)
T KOG0315|consen 27 ALTGICSRTIQHP-DSQVNRLEITPDKKDLAAAGNQ---------HVRLYDLNSNNPNPVATFE-GHTKNVTAVGFQCDG 95 (311)
T ss_pred hhcCeEEEEEecC-ccceeeEEEcCCcchhhhccCC---------eeEEEEccCCCCCceeEEe-ccCCceEEEEEeecC
Confidence 5689999999987 5899999999999999888877 69999999985 577764 344789999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhh
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEEL 162 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~ 162 (248)
..+++|+++||||.++-.+-..++. .++||+++.+|+.+.|+++.+++.|++||+-. -++...++.|-
T Consensus 96 rWMyTgseDgt~kIWdlR~~~~qR~~~~--~spVn~vvlhpnQteLis~dqsg~irvWDl~~-------~~c~~~liPe~ 166 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRSLSCQRNYQH--NSPVNTVVLHPNQTELISGDQSGNIRVWDLGE-------NSCTHELIPED 166 (311)
T ss_pred eEEEecCCCceEEEEeccCcccchhccC--CCCcceEEecCCcceEEeecCCCcEEEEEccC-------CccccccCCCC
Confidence 5667999999999998666556665 89999999999999999999999999999754 23455555544
Q ss_pred hc
Q psy2083 163 EE 164 (248)
Q Consensus 163 e~ 164 (248)
++
T Consensus 167 ~~ 168 (311)
T KOG0315|consen 167 DT 168 (311)
T ss_pred Cc
Confidence 43
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-17 Score=147.33 Aligned_cols=125 Identities=18% Similarity=0.319 Sum_probs=110.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC-CCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG-LPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~-~pI~sI~F~~d 84 (248)
-|.++|.+.++|++| ++.||+++||| +|.-|++|+|+ +++||||||+.+.+.++.|... .||++|+|+..
T Consensus 214 WD~R~~~c~qtF~gh-esDINsv~ffP-~G~afatGSDD-------~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S 284 (343)
T KOG0286|consen 214 WDVRSGQCVQTFEGH-ESDINSVRFFP-SGDAFATGSDD-------ATCRLYDLRADQELAVYSHDSIICGITSVAFSKS 284 (343)
T ss_pred eeccCcceeEeeccc-ccccceEEEcc-CCCeeeecCCC-------ceeEEEeecCCcEEeeeccCcccCCceeEEEccc
Confidence 578899999999998 79999999999 55666666665 5999999999999988865432 58999999999
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
+ +.+ .+|.++.+||.-.|+.+..+.+ |...|.++.++|||-.+.+|+-|.+|++|
T Consensus 285 GRlLfagy~d~~c~vWDtlk~e~vg~L~G-HeNRvScl~~s~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 285 GRLLFAGYDDFTCNVWDTLKGERVGVLAG-HENRVSCLGVSPDGMAVATGSWDSTLRIW 342 (343)
T ss_pred ccEEEeeecCCceeEeeccccceEEEeec-cCCeeEEEEECCCCcEEEecchhHheeec
Confidence 8 444 6899999999999999999998 79999999999999999999999999999
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.4e-17 Score=158.46 Aligned_cols=184 Identities=13% Similarity=0.146 Sum_probs=135.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCC-------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHM------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~------------- 71 (248)
+|..++-...++=+| +++|..+.|+|+...|+++++|. +||||.+++-..+..+ +|.
T Consensus 436 ~D~~~~~~~~~L~GH-~GPVyg~sFsPd~rfLlScSED~--------svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~Gy 506 (707)
T KOG0263|consen 436 LDDDSSGTSRTLYGH-SGPVYGCSFSPDRRFLLSCSEDS--------SVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGY 506 (707)
T ss_pred ccccCCceeEEeecC-CCceeeeeecccccceeeccCCc--------ceeeeecccceeEEEecCCCcceeeEEecCCce
Confidence 344444444444454 89999999999999999998886 9999999998665553 442
Q ss_pred ---------------------------CCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE
Q psy2083 72 ---------------------------YGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH 121 (248)
Q Consensus 72 ---------------------------~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~ 121 (248)
|-..|.+|.|||+. ++ +|.|++||+||..+|..+.-|.+ |..+|.+++|
T Consensus 507 YFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~ 585 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF 585 (707)
T ss_pred EEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE
Confidence 11234445555555 44 46899999999999999999998 7999999999
Q ss_pred eCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc----ccccccCCceeecHhHHhhcCCccccCCCccc
Q psy2083 122 IPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN----IIENVYDDYKFVTRQELEDLGLGHLIGTSLLR 197 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~----~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~ 197 (248)
+|+|.+|++|++|+.|++||++.= +- +.+..++. ..+.-+|+-.+|.-...-++.+|.+. +
T Consensus 586 Sp~Gr~LaSg~ed~~I~iWDl~~~-------~~---v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~-----~ 650 (707)
T KOG0263|consen 586 SPCGRYLASGDEDGLIKIWDLANG-------SL---VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT-----K 650 (707)
T ss_pred cCCCceEeecccCCcEEEEEcCCC-------cc---hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch-----h
Confidence 999999999999999999999861 11 22222321 12344789999998888888888644 3
Q ss_pred ccceeeeechhhHHHHh
Q psy2083 198 AYMHGFFMDIRLYRKAK 214 (248)
Q Consensus 198 ~ymhgyf~~~~ly~~~~ 214 (248)
++|-|+..+..+++.++
T Consensus 651 ~~~~~~~~~~~~~~~~~ 667 (707)
T KOG0263|consen 651 VIELLNLGHISTSNSAI 667 (707)
T ss_pred hcccccccccccccccc
Confidence 44447777777775544
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.5e-18 Score=155.39 Aligned_cols=126 Identities=10% Similarity=0.189 Sum_probs=108.9
Q ss_pred chhcC-ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G-~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
...++ ..++.+++| ...|..++|.|+|.+|.+++-|. +.+|||++++..+.. .+| ..+|.+|+|++|
T Consensus 246 w~~~~e~~l~~l~gH-~~RVs~VafHPsG~~L~TasfD~--------tWRlWD~~tk~ElL~QEGH--s~~v~~iaf~~D 314 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGH-LARVSRVAFHPSGKFLGTASFDS--------TWRLWDLETKSELLLQEGH--SKGVFSIAFQPD 314 (459)
T ss_pred eccCCCcchhhhhcc-hhhheeeeecCCCceeeeccccc--------chhhcccccchhhHhhccc--ccccceeEecCC
Confidence 33344 577777877 68999999999988898988887 999999999876554 455 489999999999
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++| +.|..-||||+++|+++-.+++ |..+|-+|.|+|||-.|++|+.|+++++|++..
T Consensus 315 GSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~ 376 (459)
T KOG0272|consen 315 GSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM 376 (459)
T ss_pred CceeeccCccchhheeecccCcEEEEecc-cccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence 9 333 4799999999999999999999 799999999999999999999999999999865
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-17 Score=150.94 Aligned_cols=124 Identities=14% Similarity=0.224 Sum_probs=110.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
-|.++|+++-++++| ...|.++.|+|.|-.++++|+|+ ++++||||..+++.+ ..|. .-|..|.|.|.
T Consensus 330 WDlRtgr~im~L~gH-~k~I~~V~fsPNGy~lATgs~Dn--------t~kVWDLR~r~~ly~ipAH~--nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 330 WDLRTGRCIMFLAGH-IKEILSVAFSPNGYHLATGSSDN--------TCKVWDLRMRSELYTIPAHS--NLVSQVKYSPQ 398 (459)
T ss_pred eecccCcEEEEeccc-ccceeeEeECCCceEEeecCCCC--------cEEEeeecccccceeccccc--chhhheEeccc
Confidence 478999999999996 89999999999665577777776 999999999988765 4665 78999999995
Q ss_pred c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
. ++ ++-|+++|||..+++.++.++.+ |...|-++..+|||..|++++-|+++++|.
T Consensus 399 ~g~fL~TasyD~t~kiWs~~~~~~~ksLaG-He~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 399 EGYFLVTASYDNTVKIWSTRTWSPLKSLAG-HEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCeEEEEcccCcceeeecCCCcccchhhcC-CccceEEEEeccCCceEEEeccCceeeecc
Confidence 3 44 46799999999999999999999 799999999999999999999999999995
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-17 Score=159.12 Aligned_cols=123 Identities=13% Similarity=0.271 Sum_probs=107.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
-+.++.|.+| .+.|.++.|.|++.+++++|+|. +||+||+.+|..+.++. +|..||.+|+|+|++ ++|
T Consensus 525 ~~PlRifagh-lsDV~cv~FHPNs~Y~aTGSsD~--------tVRlWDv~~G~~VRiF~-GH~~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 525 NKPLRIFAGH-LSDVDCVSFHPNSNYVATGSSDR--------TVRLWDVSTGNSVRIFT-GHKGPVTALAFSPCGRYLAS 594 (707)
T ss_pred CCchhhhccc-ccccceEEECCcccccccCCCCc--------eEEEEEcCCCcEEEEec-CCCCceEEEEEcCCCceEee
Confidence 3455665665 78999999999888888887775 99999999998888773 456999999999998 666
Q ss_pred e-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 M-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 s-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +|+.|+|||+.+|+.+..+.+ |...|+++.|+.||+.|++|+.|.+|.+||+-.
T Consensus 595 g~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 595 GDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred cccCCcEEEEEcCCCcchhhhhc-ccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 4 799999999999999999998 699999999999999999999999999998643
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=151.83 Aligned_cols=121 Identities=14% Similarity=0.356 Sum_probs=101.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
.+.++.+| ...|++++|+|++..+++++.|. +|++||+..+ +.+.+. .+|..+|++++|+|++ ++|
T Consensus 195 ~~~~l~~h-~~~v~~~~fs~d~~~l~s~s~D~--------tiriwd~~~~~~~~~~l-~gH~~~v~~~~f~p~g~~i~Sg 264 (456)
T KOG0266|consen 195 LLRELSGH-TRGVSDVAFSPDGSYLLSGSDDK--------TLRIWDLKDDGRNLKTL-KGHSTYVTSVAFSPDGNLLVSG 264 (456)
T ss_pred hhcccccc-ccceeeeEECCCCcEEEEecCCc--------eEEEeeccCCCeEEEEe-cCCCCceEEEEecCCCCEEEEe
Confidence 44445444 78999999999887777777775 9999999655 555553 2455999999999998 444
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|++|||||.++|+++..+.+ |...|++++|++|+.+|++++.|+.|++|++-.
T Consensus 265 s~D~tvriWd~~~~~~~~~l~~-hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 265 SDDGTVRIWDVRTGECVRKLKG-HSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred cCCCcEEEEeccCCeEEEeeec-cCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 6899999999999999999999 699999999999999999999999999999754
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=140.60 Aligned_cols=128 Identities=11% Similarity=0.152 Sum_probs=111.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|+..+-|.+| ...|.+++|++|+..+++++.|. +|+||++-....+..-++++...|++|.|+|+.
T Consensus 91 Dl~~g~~t~~f~GH-~~dVlsva~s~dn~qivSGSrDk--------Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~ 161 (315)
T KOG0279|consen 91 DLATGESTRRFVGH-TKDVLSVAFSTDNRQIVSGSRDK--------TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNES 161 (315)
T ss_pred EecCCcEEEEEEec-CCceEEEEecCCCceeecCCCcc--------eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCC
Confidence 45567777777776 78999999999999999988887 999999988766665565556899999999984
Q ss_pred ---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++ +.|++||+||.++-+..+++-+ |...+|-++++|||.++++|+.|+++.+|++.+
T Consensus 162 ~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 162 NPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE 223 (315)
T ss_pred CcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEEccC
Confidence 554 6899999999999999999988 699999999999999999999999999999754
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-16 Score=140.68 Aligned_cols=116 Identities=12% Similarity=0.245 Sum_probs=100.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-Cc---eeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD-NY---VLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~-d~---l~Ssdd~ 92 (248)
+.+| .+.+ ++|-|.+++.++++++|. ++.||||.+++.+..+ |+|...|.++.+.| +. |.++-|+
T Consensus 141 l~gH-tgyl-ScC~f~dD~~ilT~SGD~--------TCalWDie~g~~~~~f-~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 141 LAGH-TGYL-SCCRFLDDNHILTGSGDM--------TCALWDIETGQQTQVF-HGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred ecCc-ccee-EEEEEcCCCceEecCCCc--------eEEEEEcccceEEEEe-cCCcccEEEEecCCCCCCeEEeccccc
Confidence 4454 5555 555565578899999997 9999999999887776 56679999999999 44 6667899
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..||||.+.|.++++|++ |.++||+|+|+|+|--+++|++|++.++||+.+
T Consensus 210 ~aklWD~R~~~c~qtF~g-hesDINsv~ffP~G~afatGSDD~tcRlyDlRa 260 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEG-HESDINSVRFFPSGDAFATGSDDATCRLYDLRA 260 (343)
T ss_pred ceeeeeccCcceeEeecc-cccccceEEEccCCCeeeecCCCceeEEEeecC
Confidence 999999999999999999 699999999999999999999999999999876
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-16 Score=148.95 Aligned_cols=125 Identities=14% Similarity=0.328 Sum_probs=105.5
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-- 85 (248)
..|+++.++.+| ...|++++|+|++.++++|+.|. +|+|||+++++++... .|. .+|++++|++++
T Consensus 234 ~~~~~~~~l~gH-~~~v~~~~f~p~g~~i~Sgs~D~--------tvriWd~~~~~~~~~l~~hs--~~is~~~f~~d~~~ 302 (456)
T KOG0266|consen 234 DDGRNLKTLKGH-STYVTSVAFSPDGNLLVSGSDDG--------TVRIWDVRTGECVRKLKGHS--DGISGLAFSPDGNL 302 (456)
T ss_pred CCCeEEEEecCC-CCceEEEEecCCCCEEEEecCCC--------cEEEEeccCCeEEEeeeccC--CceEEEEECCCCCE
Confidence 457899999876 79999999999986566666664 9999999999988775 554 899999999998
Q ss_pred eee-eCCCeEEEEECCCCC--EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGS--LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk--~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+++ +.|+.|+|||..+|. ++..+..+ .. ++++++|+|++.++++++.|+++++|++...
T Consensus 303 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~ 366 (456)
T KOG0266|consen 303 LVSASYDGTIRVWDLETGSKLCLKLLSGA-ENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG 366 (456)
T ss_pred EEEcCCCccEEEEECCCCceeeeecccCC-CCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC
Confidence 444 569999999999999 56777662 33 5999999999999999999999999998764
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.9e-16 Score=148.63 Aligned_cols=117 Identities=15% Similarity=0.261 Sum_probs=96.8
Q ss_pred EecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc---
Q psy2083 17 IESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
+.+ |.+.|.+++|+| ++..+++++.|+ +|++||+..+ .|+... .+|..+|.+|+|+|+.
T Consensus 71 l~G-H~~~V~~v~fsP~d~~~LaSgS~Dg--------tIkIWdi~~~~~~~~~~~~l~~L-~gH~~~V~~l~f~P~~~~i 140 (493)
T PTZ00421 71 LLG-QEGPIIDVAFNPFDPQKLFTASEDG--------TIMGWGIPEEGLTQNISDPIVHL-QGHTKKVGIVSFHPSAMNV 140 (493)
T ss_pred EeC-CCCCEEEEEEcCCCCCEEEEEeCCC--------EEEEEecCCCccccccCcceEEe-cCCCCcEEEEEeCcCCCCE
Confidence 444 478999999999 555576776664 9999999865 345443 2445899999999973
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++ +.|++|+|||.++++.+..+.. |...|++++|+|+|.+|++++.|++|++|++..
T Consensus 141 LaSgs~DgtVrIWDl~tg~~~~~l~~-h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 141 LASAGADMVVNVWDVERGKAVEVIKC-HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEcC-CCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence 444 6899999999999999999988 689999999999999999999999999999764
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-16 Score=145.59 Aligned_cols=121 Identities=11% Similarity=0.213 Sum_probs=105.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S 88 (248)
+|-.+|.+| ...|.++.|+|++..|+++++|. ||||||+.+..|+.+ +.|. ..|.+|+|+||+ |+|
T Consensus 106 rCssS~~GH-~e~Vl~~~fsp~g~~l~tGsGD~--------TvR~WD~~TeTp~~t~KgH~--~WVlcvawsPDgk~iAS 174 (480)
T KOG0271|consen 106 RCSSSIAGH-GEAVLSVQFSPTGSRLVTGSGDT--------TVRLWDLDTETPLFTCKGHK--NWVLCVAWSPDGKKIAS 174 (480)
T ss_pred eeccccCCC-CCcEEEEEecCCCceEEecCCCc--------eEEeeccCCCCcceeecCCc--cEEEEEEECCCcchhhc
Confidence 466667776 69999999999888899999987 999999999999876 6666 899999999998 665
Q ss_pred -eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEe-----CCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHI-----PESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~-----pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+-|++|++||+++|+++. ++.+ |...|++++|. |.+++|++++.|+.|.+|++-.
T Consensus 175 G~~dg~I~lwdpktg~~~g~~l~g-H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~ 236 (480)
T KOG0271|consen 175 GSKDGSIRLWDPKTGQQIGRALRG-HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL 236 (480)
T ss_pred cccCCeEEEecCCCCCcccccccC-cccceeEEeecccccCCCccceecccCCCCEEEEEccC
Confidence 579999999999998775 4555 79999999995 5889999999999999999754
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-16 Score=135.23 Aligned_cols=127 Identities=17% Similarity=0.307 Sum_probs=106.5
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
|.+++. .+++|++| ..+|..+.|.-++.+++++|+|+ +|||||+|+...-..+.|. .||++|..||+
T Consensus 67 D~~S~np~Pv~t~e~h-~kNVtaVgF~~dgrWMyTgseDg--------t~kIWdlR~~~~qR~~~~~--spVn~vvlhpn 135 (311)
T KOG0315|consen 67 DLNSNNPNPVATFEGH-TKNVTAVGFQCDGRWMYTGSEDG--------TVKIWDLRSLSCQRNYQHN--SPVNTVVLHPN 135 (311)
T ss_pred EccCCCCCceeEEecc-CCceEEEEEeecCeEEEecCCCc--------eEEEEeccCcccchhccCC--CCcceEEecCC
Confidence 344444 68999997 79999999999999999988885 9999999995444445554 99999999999
Q ss_pred c--eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
. ++++| ++-|+|||+.+..+...+-|....+|+++++.|||.+++.++..|+..+|.++.
T Consensus 136 QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~ 198 (311)
T KOG0315|consen 136 QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLN 198 (311)
T ss_pred cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccC
Confidence 7 77775 889999999987777777664457999999999999999999999999999765
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=134.99 Aligned_cols=127 Identities=11% Similarity=0.174 Sum_probs=106.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|...|.....+.+| +..|+.++.++|+.+.++++.|+ +++|||+.++++.+.+- +|...|.+|+|++|.
T Consensus 49 d~~~G~~~r~~~GH-sH~v~dv~~s~dg~~alS~swD~--------~lrlWDl~~g~~t~~f~-GH~~dVlsva~s~dn~ 118 (315)
T KOG0279|consen 49 DIKYGVPVRRLTGH-SHFVSDVVLSSDGNFALSASWDG--------TLRLWDLATGESTRRFV-GHTKDVLSVAFSTDNR 118 (315)
T ss_pred ccccCceeeeeecc-ceEecceEEccCCceEEeccccc--------eEEEEEecCCcEEEEEE-ecCCceEEEEecCCCc
Confidence 45568888888885 79999999999988888888885 99999999998877762 344889999999987
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
|+| +-|++||+||.. |.+..++..+ +...|++|+|+|+ ...|++++.|+++++|++..
T Consensus 119 qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 119 QIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred eeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC
Confidence 555 679999999998 6666666642 2579999999998 68999999999999999876
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-16 Score=147.17 Aligned_cols=116 Identities=16% Similarity=0.381 Sum_probs=99.1
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~ 92 (248)
+..||...|.+++|+|.+...+++++|+ +|+|||.+.+++-.+ .+|+ --|++|.|||.. |+| +.|+
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg--------~ikiWdf~~~kee~vL~GHg--wdVksvdWHP~kgLiasgskDn 244 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDG--------TIKIWDFRMPKEERVLRGHG--WDVKSVDWHPTKGLIASGSKDN 244 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCC--------eEEEEeccCCchhheeccCC--CCcceeccCCccceeEEccCCc
Confidence 3456567899999999776565665554 999999999877544 4555 789999999997 555 5788
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.||+||+++|.++.++.. |...|..+.|.|++.+|++++.|..+++|||.
T Consensus 245 lVKlWDprSg~cl~tlh~-HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR 294 (464)
T KOG0284|consen 245 LVKLWDPRSGSCLATLHG-HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR 294 (464)
T ss_pred eeEeecCCCcchhhhhhh-ccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence 999999999999999998 79999999999999999999999999999986
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-15 Score=147.31 Aligned_cols=116 Identities=13% Similarity=0.215 Sum_probs=99.3
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
.+|...++++.++||++.+++|++|+ +||+||.+++-++.++. .|...|+.++|+..+ +.+|-||+||
T Consensus 347 QgH~~~i~~l~YSpDgq~iaTG~eDg--------KVKvWn~~SgfC~vTFt-eHts~Vt~v~f~~~g~~llssSLDGtVR 417 (893)
T KOG0291|consen 347 QGHSDRITSLAYSPDGQLIATGAEDG--------KVKVWNTQSGFCFVTFT-EHTSGVTAVQFTARGNVLLSSSLDGTVR 417 (893)
T ss_pred cccccceeeEEECCCCcEEEeccCCC--------cEEEEeccCceEEEEec-cCCCceEEEEEEecCCEEEEeecCCeEE
Confidence 45588999999999998888888875 89999999999998874 334889999999987 4456799999
Q ss_pred EEECCCCCEEEEeec-------------------------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 96 IWSKDNGSLFTCIES-------------------------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 96 IWD~~tGk~~~tie~-------------------------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
.||...++++.++.. +|+.||.+++|+|++..|++|+
T Consensus 418 AwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 418 AWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGS 497 (893)
T ss_pred eeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecc
Confidence 999987777666432 3899999999999999999999
Q ss_pred CCCeEEEEEcC
Q psy2083 133 ENKKILTYYIP 143 (248)
Q Consensus 133 ed~~I~~w~Ip 143 (248)
.|.+|++|+|-
T Consensus 498 WDkTVRiW~if 508 (893)
T KOG0291|consen 498 WDKTVRIWDIF 508 (893)
T ss_pred ccceEEEEEee
Confidence 99999999873
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=142.63 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=95.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCc--------eeEEecCCCCCCeeEEEEcC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADK--------PLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~--------pl~~~~h~~~~pI~sI~F~~ 83 (248)
.+..+.+| .+.|.+++|+|+.+ +++++|.|+ +|+|||++++. |+... .+|..+|.+|+|+|
T Consensus 66 ~v~~L~gH-~~~V~~lafsP~~~~lLASgS~Dg--------tIrIWDi~t~~~~~~~i~~p~~~L-~gH~~~V~sVaf~P 135 (568)
T PTZ00420 66 PVIKLKGH-TSSILDLQFNPCFSEILASGSEDL--------TIRVWEIPHNDESVKEIKDPQCIL-KGHKKKISIIDWNP 135 (568)
T ss_pred eEEEEcCC-CCCEEEEEEcCCCCCEEEEEeCCC--------eEEEEECCCCCccccccccceEEe-ecCCCcEEEEEECC
Confidence 45556665 78999999999744 566666664 99999998752 33332 23458999999999
Q ss_pred Cc---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ +++ +.|++|+|||+++++....+.. ...|.+++|+|+|.+|++++.|++|++|++..
T Consensus 136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~--~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINM--PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEEec--CCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence 86 334 6799999999999998888864 67899999999999999999999999999865
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-15 Score=147.54 Aligned_cols=131 Identities=11% Similarity=0.221 Sum_probs=111.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l 86 (248)
.|.++|++| +..|-.++|.|.+...|++++-+ +|||+|.+-++.|..+.. +|...||+|.|-+.+ |
T Consensus 131 a~~qtfeGH-~HyVMqv~fnPkD~ntFaS~sLD-------rTVKVWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylI 201 (794)
T KOG0276|consen 131 ACEQTFEGH-EHYVMQVAFNPKDPNTFASASLD-------RTVKVWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLI 201 (794)
T ss_pred eeeeEEcCc-ceEEEEEEecCCCccceeeeecc-------ccEEEEEcCCCCCceeee-ccccCcceEEeccCCCcceEE
Confidence 377888887 79999999999887777665554 399999999999988764 555889999998765 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC--------CCCCCCCcc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP--------SLGPAPKWC 152 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip--------~lG~aP~wc 152 (248)
.++||.+|||||..|..|++++++ |...|+.++|+|.=.+|++|+||++|++|--. .+|-.-.||
T Consensus 202 sgaDD~tiKvWDyQtk~CV~TLeG-Ht~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~ 274 (794)
T KOG0276|consen 202 SGADDLTIKVWDYQTKSCVQTLEG-HTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWC 274 (794)
T ss_pred ecCCCceEEEeecchHHHHHHhhc-ccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEE
Confidence 557999999999999999999999 79999999999999999999999999999632 346666788
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.1e-15 Score=134.39 Aligned_cols=161 Identities=17% Similarity=0.336 Sum_probs=118.6
Q ss_pred CCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCe
Q psy2083 21 DQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSV 93 (248)
Q Consensus 21 ~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~ 93 (248)
|...|-+++++|. +++++++|-| |+|+|||+|++ ..+.++.|+ .-||-|.|+.+. |+| +|+++
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~D--------gsIrIWDiRs~~~~~~~~~kAh~--sDVNVISWnr~~~lLasG~DdGt 325 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCD--------GSIRIWDIRSGPKKAAVSTKAHN--SDVNVISWNRREPLLASGGDDGT 325 (440)
T ss_pred cccchhhhccCCccCceEEeeecC--------ceEEEEEecCCCccceeEeeccC--CceeeEEccCCcceeeecCCCce
Confidence 5788999999985 4445565556 49999999998 346677776 789999999876 555 48999
Q ss_pred EEEEECCC---CCEEEEeecCCCCCeeEEEEeCC-CCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccc-
Q psy2083 94 VKIWSKDN---GSLFTCIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIE- 168 (248)
Q Consensus 94 IKIWD~~t---Gk~~~tie~~h~~~In~l~~~pd-sgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~- 168 (248)
++|||+++ |++++++.- |.++|+++.|+|. .+.|+++++|.+|.+|++. +|.=-||-.+.+..
T Consensus 326 ~~iwDLR~~~~~~pVA~fk~-Hk~pItsieW~p~e~s~iaasg~D~QitiWDls-----------vE~D~ee~~~~a~~~ 393 (440)
T KOG0302|consen 326 LSIWDLRQFKSGQPVATFKY-HKAPITSIEWHPHEDSVIAASGEDNQITIWDLS-----------VEADEEEIDQEAAEG 393 (440)
T ss_pred EEEEEhhhccCCCcceeEEe-ccCCeeEEEeccccCceEEeccCCCcEEEEEee-----------ccCChhhhccccccc
Confidence 99999986 789999998 7999999999994 5888999999999999974 22222333332222
Q ss_pred --cccCCceeec--HhHHhhcCCccccCCCcccccceee
Q psy2083 169 --NVYDDYKFVT--RQELEDLGLGHLIGTSLLRAYMHGF 203 (248)
Q Consensus 169 --~~yd~y~fvt--~~~l~~l~~~~ligt~~l~~ymhgy 203 (248)
.+-..--||- ..|+++|---..|..=++..-|-||
T Consensus 394 L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 394 LQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred hhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 3555677886 6788888664444332444445554
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.8e-15 Score=137.57 Aligned_cols=129 Identities=10% Similarity=0.122 Sum_probs=104.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+..++...+.+.+| .+.|.+..++|.++.++.+|+.+ |+|||||+|+. .++...+|+ .||-+|.|.|.+
T Consensus 139 d~s~a~v~~~l~~h-tDYVR~g~~~~~~~hivvtGsYD-------g~vrl~DtR~~~~~v~elnhg--~pVe~vl~lpsg 208 (487)
T KOG0310|consen 139 DLSTAYVQAELSGH-TDYVRCGDISPANDHIVVTGSYD-------GKVRLWDTRSLTSRVVELNHG--CPVESVLALPSG 208 (487)
T ss_pred EcCCcEEEEEecCC-cceeEeeccccCCCeEEEecCCC-------ceEEEEEeccCCceeEEecCC--CceeeEEEcCCC
Confidence 44445554466665 89999999999888766555543 69999999998 677778877 999999999996
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|+++....||+||..+|..+.+...+|...|+|+++..+|..|++|+-|+.|++|++..+
T Consensus 209 s~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 209 SLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred CEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce
Confidence 888889999999999765544444447899999999999999999999999999995443
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=119.80 Aligned_cols=124 Identities=12% Similarity=0.267 Sum_probs=105.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
+|..+++.+..+..+ .+.|..+++.|++..+++++.++ .|++||+++++++... .|. .+|.++.|+++
T Consensus 162 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~--------~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~ 230 (289)
T cd00200 162 WDLRTGKCVATLTGH-TGEVNSVAFSPDGEKLLSSSSDG--------TIKLWDLSTGKCLGTLRGHE--NGVNSVAFSPD 230 (289)
T ss_pred EEccccccceeEecC-ccccceEEECCCcCEEEEecCCC--------cEEEEECCCCceecchhhcC--CceEEEEEcCC
Confidence 455567777777765 57899999999877787777764 8999999998887766 554 69999999997
Q ss_pred c--eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y--VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~--l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++++ ++.|++||..++++...+.. |...|++++|+|++..|++++.|+.|++|+
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCCceeEEEccc-cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 6 55555 99999999999999999987 588999999999999999999999999994
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.9e-15 Score=131.53 Aligned_cols=134 Identities=11% Similarity=0.238 Sum_probs=113.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+.+|+++..+.+| .+.||.++-..-+-.++.+++|+ |++||||+|+..++.++... .+++++.|..++
T Consensus 117 wD~~tG~~~rk~k~h-~~~vNs~~p~rrg~~lv~SgsdD-------~t~kl~D~R~k~~~~t~~~k--yqltAv~f~d~s 186 (338)
T KOG0265|consen 117 WDAETGKRIRKHKGH-TSFVNSLDPSRRGPQLVCSGSDD-------GTLKLWDIRKKEAIKTFENK--YQLTAVGFKDTS 186 (338)
T ss_pred Eecccceeeehhccc-cceeeecCccccCCeEEEecCCC-------ceEEEEeecccchhhccccc--eeEEEEEecccc
Confidence 688999999998887 67777777333344466666665 59999999999888877544 679999999886
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
+.| +-|+.||+||++.++.+.++.+ |..+|+++..+|+|..+++-+.|.++++||+...-|+-|
T Consensus 187 ~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R 253 (338)
T KOG0265|consen 187 DQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR 253 (338)
T ss_pred cceeeccccCceeeeccccCcceEEeec-ccCceeeEEeccCCCccccccccceEEEEEecccCCCCc
Confidence 555 5799999999999999999999 699999999999999999999999999999998888876
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-14 Score=129.84 Aligned_cols=127 Identities=9% Similarity=0.154 Sum_probs=104.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+...+.+..+| ...|-++.++||+..+++++-++ +|+|||-.++.++-..--+|..+|++++|.|-.
T Consensus 143 D~~TeTp~~t~KgH-~~WVlcvawsPDgk~iASG~~dg--------~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl 213 (480)
T KOG0271|consen 143 DLDTETPLFTCKGH-KNWVLCVAWSPDGKKIASGSKDG--------SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHL 213 (480)
T ss_pred ccCCCCcceeecCC-ccEEEEEEECCCcchhhccccCC--------eEEEecCCCCCcccccccCcccceeEEeeccccc
Confidence 34445566666665 78999999999988888877774 999999999988766545666999999998742
Q ss_pred ------eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ------VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ------l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++| +-|+.|+|||..-|+++.++.+ |..+|+|+++- ..|+|.+|+.|++|++|..-.
T Consensus 214 ~p~~r~las~skDg~vrIWd~~~~~~~~~lsg-HT~~VTCvrwG-G~gliySgS~DrtIkvw~a~d 277 (480)
T KOG0271|consen 214 VPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG-HTASVTCVRWG-GEGLIYSGSQDRTIKVWRALD 277 (480)
T ss_pred CCCccceecccCCCCEEEEEccCceEEEEecc-CccceEEEEEc-CCceEEecCCCceEEEEEccc
Confidence 555 4699999999999999999998 79999999994 346999999999999998644
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-14 Score=132.54 Aligned_cols=121 Identities=12% Similarity=0.181 Sum_probs=100.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-------
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~------- 85 (248)
+..++.+| .+.|+.+.|.|.+.+|+++++|. |++||.+..+...... |.|...|..|.|+|++
T Consensus 351 P~~t~~GH-~g~V~alk~n~tg~LLaS~SdD~--------TlkiWs~~~~~~~~~l-~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 351 PVKTFIGH-HGEVNALKWNPTGSLLASCSDDG--------TLKIWSMGQSNSVHDL-QAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred cceeeecc-cCceEEEEECCCCceEEEecCCC--------eeEeeecCCCcchhhh-hhhccceeeEeecCCCCccCCCc
Confidence 55666665 59999999999776666666664 9999998877665543 3445789999999863
Q ss_pred ----eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ----VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ----l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++ +-|.+||+||+..|.++++|.. |..+|-+|+|+|||.++++|+-|+.|++|.++.
T Consensus 421 ~~~~l~sas~dstV~lwdv~~gv~i~~f~k-H~~pVysvafS~~g~ylAsGs~dg~V~iws~~~ 483 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESGVPIHTLMK-HQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKT 483 (524)
T ss_pred CCceEEEeecCCeEEEEEccCCceeEeecc-CCCceEEEEecCCCcEEEecCCCCeeEeccccc
Confidence 444 5799999999999999999988 699999999999999999999999999998764
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-13 Score=133.68 Aligned_cols=121 Identities=6% Similarity=0.036 Sum_probs=95.0
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
+..+.+| ...|.+++|+|++..++ ++|.|+ +|+|||+++++.+....|. .+|.+++|++++ ++ ++
T Consensus 118 ~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~Dg--------tIrIWDl~tg~~~~~i~~~--~~V~SlswspdG~lLat~s 186 (568)
T PTZ00420 118 QCILKGH-KKKISIIDWNPMNYYIMCSSGFDS--------FVNIWDIENEKRAFQINMP--KKLSSLKWNIKGNLLSGTC 186 (568)
T ss_pred eEEeecC-CCcEEEEEECCCCCeEEEEEeCCC--------eEEEEECCCCcEEEEEecC--CcEEEEEECCCCCEEEEEe
Confidence 3445554 78999999999877654 555554 9999999999876666554 689999999998 44 45
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEE-----EeCCCCEEEEEeCC----CeEEEEEcCCCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLC-----HIPESGMMFIANEN----KKILTYYIPSLG 146 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~-----~~pdsgll~sa~ed----~~I~~w~Ip~lG 146 (248)
.|+.|+|||+++|+.+.++.+ |...+++.+ |+|++++|++++.| ++|++|++..++
T Consensus 187 ~D~~IrIwD~Rsg~~i~tl~g-H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~ 251 (568)
T PTZ00420 187 VGKHMHIIDPRKQEIASSFHI-HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTT 251 (568)
T ss_pred cCCEEEEEECCCCcEEEEEec-ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCC
Confidence 799999999999999999998 576655433 45899999998866 479999998754
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=131.69 Aligned_cols=124 Identities=8% Similarity=0.195 Sum_probs=97.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
..+..+.+| ...|..++|+|+++ .+++++.|+ +|+|||+++++++.... .|..+|.+|+|+|++ ++
T Consensus 116 ~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~Dg--------tVrIWDl~tg~~~~~l~-~h~~~V~sla~spdG~lLat 185 (493)
T PTZ00421 116 DPIVHLQGH-TKKVGIVSFHPSAMNVLASAGADM--------VVNVWDVERGKAVEVIK-CHSDQITSLEWNLDGSLLCT 185 (493)
T ss_pred cceEEecCC-CCcEEEEEeCcCCCCEEEEEeCCC--------EEEEEECCCCeEEEEEc-CCCCceEEEEEECCCCEEEE
Confidence 356666665 78999999999765 466666664 99999999998776652 334789999999997 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCC-eeEEEEeCCCCEEEEEe----CCCeEEEEEcCCCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQ-FNNLCHIPESGMMFIAN----ENKKILTYYIPSLG 146 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~-In~l~~~pdsgll~sa~----ed~~I~~w~Ip~lG 146 (248)
++.|++|+|||+++|+.+.++.+ |... +..+.|.|+++.|++++ .|++|++|++..+.
T Consensus 186 gs~Dg~IrIwD~rsg~~v~tl~~-H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 186 TSKDKKLNIIDPRDGTIVSSVEA-HASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred ecCCCEEEEEECCCCcEEEEEec-CCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 46899999999999999999988 4544 45678899988888764 47899999998754
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.7e-14 Score=123.04 Aligned_cols=114 Identities=12% Similarity=0.218 Sum_probs=92.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
|.+.|.++.|-..+..++++..| ++|||||.|+++-++..... .||+++..++++ |..++.+.|++||
T Consensus 142 htg~Ir~v~wc~eD~~iLSSadd--------~tVRLWD~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia~gssV~Fwd 211 (334)
T KOG0278|consen 142 HTGGIRTVLWCHEDKCILSSADD--------KTVRLWDHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIAYGSSVKFWD 211 (334)
T ss_pred CCCcceeEEEeccCceEEeeccC--------CceEEEEeccCcEEEEEecC--CCCcceeeccCCCEEEEecCceeEEec
Confidence 47899999998766666666444 49999999999888876554 789999999998 5568889999999
Q ss_pred CCCCCEEEEee-----------------------------------------cCCCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 99 KDNGSLFTCIE-----------------------------------------SGDQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 99 ~~tGk~~~tie-----------------------------------------~~h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+-+++..++ .+|..+|.||.|+|||.+.++|++|++|
T Consensus 212 aksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi 291 (334)
T KOG0278|consen 212 AKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI 291 (334)
T ss_pred cccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceE
Confidence 98765554421 1368899999999999999999999999
Q ss_pred EEEEcCC
Q psy2083 138 LTYYIPS 144 (248)
Q Consensus 138 ~~w~Ip~ 144 (248)
++|-.-.
T Consensus 292 rlWQt~~ 298 (334)
T KOG0278|consen 292 RLWQTTP 298 (334)
T ss_pred EEEEecC
Confidence 9997644
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.6e-13 Score=112.37 Aligned_cols=128 Identities=11% Similarity=0.253 Sum_probs=102.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++.+..+..+ ...|..+++.|++.++++++.+ |.|++||+++++++.... .+..+|.++.|+|++
T Consensus 78 ~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 147 (289)
T cd00200 78 WDLETGECVRTLTGH-TSYVSSVAFSPDGRILSSSSRD--------KTIKVWDVETGKCLTTLR-GHTDWVNSVAFSPDG 147 (289)
T ss_pred EEcCcccceEEEecc-CCcEEEEEEcCCCCEEEEecCC--------CeEEEEECCCcEEEEEec-cCCCcEEEEEEcCcC
Confidence 344555666666665 5689999999875544444435 389999999888776653 334789999999976
Q ss_pred --eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++. ++.|++||.++++.+..+.. |...|++++++|++..+++++.++.|.+|++..
T Consensus 148 ~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~ 208 (289)
T cd00200 148 TFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST 208 (289)
T ss_pred CEEEEEcCCCcEEEEEccccccceeEec-CccccceEEECCCcCEEEEecCCCcEEEEECCC
Confidence 55555 99999999999999999987 578999999999999999999999999999875
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-14 Score=130.97 Aligned_cols=123 Identities=11% Similarity=0.243 Sum_probs=100.2
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--CceeEEecCCCCCCeeEEEEcCCc---eeee-C
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--DKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D 90 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d 90 (248)
+.+ |++.|+.+.|.+-...+|++.+|+ +.+.|||+|+ .+|-.. ...|+.+|++|+|+|-. |+++ .
T Consensus 223 ~~~-h~~~VeDV~~h~~h~~lF~sv~dd-------~~L~iwD~R~~~~~~~~~-~~ah~~~vn~~~fnp~~~~ilAT~S~ 293 (422)
T KOG0264|consen 223 FSG-HEDVVEDVAWHPLHEDLFGSVGDD-------GKLMIWDTRSNTSKPSHS-VKAHSAEVNCVAFNPFNEFILATGSA 293 (422)
T ss_pred eec-CCcceehhhccccchhhheeecCC-------CeEEEEEcCCCCCCCccc-ccccCCceeEEEeCCCCCceEEeccC
Confidence 444 589999999999877788666665 4899999995 444333 23445999999999976 5554 5
Q ss_pred CCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 91 SSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 91 d~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
|++|++||+++ .+++.++++ |...|..|.|+|+- ++|++++.|+++.+||+..+|..-
T Consensus 294 D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 294 DKTVALWDLRNLNKPLHTFEG-HEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ 353 (422)
T ss_pred CCcEEEeechhcccCceeccC-CCcceEEEEeCCCCCceeEecccCCcEEEEecccccccc
Confidence 99999999997 568999998 79999999999954 889999999999999998877664
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=141.50 Aligned_cols=125 Identities=14% Similarity=0.304 Sum_probs=107.2
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-- 85 (248)
+=|.++.-|+.| .+.|..++|+|..-..++||+|. +|++|...+.+++.+. +|. ..|+.+.||+..
T Consensus 39 RM~tli~rFdeH-dGpVRgv~FH~~qplFVSGGDDy--------kIkVWnYk~rrclftL~GHl--DYVRt~~FHheyPW 107 (1202)
T KOG0292|consen 39 RMGTLIDRFDEH-DGPVRGVDFHPTQPLFVSGGDDY--------KIKVWNYKTRRCLFTLLGHL--DYVRTVFFHHEYPW 107 (1202)
T ss_pred hhhhHHhhhhcc-CCccceeeecCCCCeEEecCCcc--------EEEEEecccceehhhhcccc--ceeEEeeccCCCce
Confidence 336667777777 69999999999655444555554 8999999999988774 665 899999999987
Q ss_pred ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|+ +|||.+|+||+..++++++.+.+ |..-|-|..|+|...++++||-|.+|++|||..|
T Consensus 108 IlSASDDQTIrIWNwqsr~~iavltG-HnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 108 ILSASDDQTIRIWNWQSRKCIAVLTG-HNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred EEEccCCCeEEEEeccCCceEEEEec-CceEEEeeccCCccceEEEecccceEEEEeecch
Confidence 55 57999999999999999999999 7999999999999999999999999999999887
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.4e-13 Score=125.14 Aligned_cols=126 Identities=17% Similarity=0.303 Sum_probs=99.9
Q ss_pred chhcCceeEEEecC-CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~-~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+..+|.+++..... ..-.+++++|+| +|++|..|..+ |.|++||+.++..+..+. +|..||+.|+|+.++
T Consensus 331 d~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d-------~~vkiwdlks~~~~a~Fp-ght~~vk~i~FsENG 401 (506)
T KOG0289|consen 331 DISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPD-------GVVKIWDLKSQTNVAKFP-GHTGPVKAISFSENG 401 (506)
T ss_pred EccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCC-------ceEEEEEcCCccccccCC-CCCCceeEEEeccCc
Confidence 45678888876542 123467777777 56777776664 589999999988665553 466999999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+.++||+.||+||++.-+++.+|......++++++|.+.|.+|.++++|-+|+++.
T Consensus 402 Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 402 YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 55679999999999999999999862245799999999999999998888887775
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=132.66 Aligned_cols=125 Identities=7% Similarity=0.107 Sum_probs=101.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d- 84 (248)
|..+++.+..+.+| .+.|++++|+|.++. +++++.|+ +|++||++++.++....+. ..|.++.|+++
T Consensus 561 d~~~~~~~~~~~~H-~~~V~~l~~~p~~~~~L~Sgs~Dg--------~v~iWd~~~~~~~~~~~~~--~~v~~v~~~~~~ 629 (793)
T PLN00181 561 DVARSQLVTEMKEH-EKRVWSIDYSSADPTLLASGSDDG--------SVKLWSINQGVSIGTIKTK--ANICCVQFPSES 629 (793)
T ss_pred ECCCCeEEEEecCC-CCCEEEEEEcCCCCCEEEEEcCCC--------EEEEEECCCCcEEEEEecC--CCeEEEEEeCCC
Confidence 55678888888776 789999999975554 55666554 9999999999887776543 58999999654
Q ss_pred c---eeeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.|+.|++||.++++ ++.++.+ |...|++++|. +++.|++++.|++|++|+++.
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~-h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~ 691 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIG-HSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSM 691 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecC-CCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCC
Confidence 4 445689999999999876 5677777 68999999996 788999999999999999864
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.9e-14 Score=127.11 Aligned_cols=121 Identities=17% Similarity=0.347 Sum_probs=104.5
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
++|-+.|.++.-.|.-..++++|.|. ++|+||+|+..++.+.. +|..||.+|.+.|.. +.+|.|.+|+
T Consensus 232 hGHlS~V~~L~lhPTldvl~t~grDs--------t~RvWDiRtr~~V~~l~-GH~~~V~~V~~~~~dpqvit~S~D~tvr 302 (460)
T KOG0285|consen 232 HGHLSGVYCLDLHPTLDVLVTGGRDS--------TIRVWDIRTRASVHVLS-GHTNPVASVMCQPTDPQVITGSHDSTVR 302 (460)
T ss_pred ccccceeEEEeccccceeEEecCCcc--------eEEEeeecccceEEEec-CCCCcceeEEeecCCCceEEecCCceEE
Confidence 33478999999999877899999987 99999999999988763 344999999999754 5557899999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN 157 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~ 157 (248)
+||...|+...++.. |...+.++|.+|.-.++++|+.| .|+.|.+|. -.||.|
T Consensus 303 lWDl~agkt~~tlt~-hkksvral~lhP~e~~fASas~d-nik~w~~p~-------g~f~~n 355 (460)
T KOG0285|consen 303 LWDLRAGKTMITLTH-HKKSVRALCLHPKENLFASASPD-NIKQWKLPE-------GEFLQN 355 (460)
T ss_pred EeeeccCceeEeeec-ccceeeEEecCCchhhhhccCCc-cceeccCCc-------cchhhc
Confidence 999999999999997 69999999999999999988865 589999997 578888
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=125.73 Aligned_cols=120 Identities=13% Similarity=0.218 Sum_probs=104.4
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCCc-ee--eeCCCeEEE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDNY-VL--SMDSSVVKI 96 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d~-l~--Ssdd~~IKI 96 (248)
|+..|+.+.-.|.+.++++++.|+ ++...|+++++.+.+..+ ..+-.+++.+||||+ |. ++.|++|||
T Consensus 302 h~~~V~~ls~h~tgeYllsAs~d~--------~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGEYLLSASNDG--------TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred ccccceeeeeccCCcEEEEecCCc--------eEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 367899999999888888887775 999999999998877654 345679999999999 44 357999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
||..++..++.|.+ |.++|..+.|+.||-+|+++++|+.|++||+..+-.-|
T Consensus 374 wdlks~~~~a~Fpg-ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPG-HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred EEcCCccccccCCC-CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence 99999999999998 79999999999999999999999999999998776544
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.2e-14 Score=133.83 Aligned_cols=121 Identities=9% Similarity=0.146 Sum_probs=107.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---- 85 (248)
.|++++++.+| ...|-+++|++++..++++|-|. .|+|||+.+|+.+..+.-+ .++++|.|+|+.
T Consensus 247 ~~~~lrtf~gH-~k~Vrd~~~s~~g~~fLS~sfD~--------~lKlwDtETG~~~~~f~~~--~~~~cvkf~pd~~n~f 315 (503)
T KOG0282|consen 247 DRRCLRTFKGH-RKPVRDASFNNCGTSFLSASFDR--------FLKLWDTETGQVLSRFHLD--KVPTCVKFHPDNQNIF 315 (503)
T ss_pred Ccceehhhhcc-hhhhhhhhccccCCeeeeeecce--------eeeeeccccceEEEEEecC--CCceeeecCCCCCcEE
Confidence 58899998887 78999999999877777887775 9999999999988877544 789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++++.|+.|+-||.++|+.++.+.- |-..|+++.|.|+|..++++++|+.|.+|..
T Consensus 316 l~G~sd~ki~~wDiRs~kvvqeYd~-hLg~i~~i~F~~~g~rFissSDdks~riWe~ 371 (503)
T KOG0282|consen 316 LVGGSDKKIRQWDIRSGKVVQEYDR-HLGAILDITFVDEGRRFISSSDDKSVRIWEN 371 (503)
T ss_pred EEecCCCcEEEEeccchHHHHHHHh-hhhheeeeEEccCCceEeeeccCccEEEEEc
Confidence 6677899999999999999998886 6899999999999999999999999999984
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.3e-14 Score=123.57 Aligned_cols=129 Identities=16% Similarity=0.263 Sum_probs=105.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|+.+|..+.+|++- .-|-.++|+.|+..|+++|.+. .+|+||+..++ |..... +|...|+.+.|...
T Consensus 86 w~a~tgdelhsf~hk--hivk~~af~~ds~~lltgg~ek--------llrvfdln~p~App~E~~-ghtg~Ir~v~wc~e 154 (334)
T KOG0278|consen 86 WDAVTGDELHSFEHK--HIVKAVAFSQDSNYLLTGGQEK--------LLRVFDLNRPKAPPKEIS-GHTGGIRTVLWCHE 154 (334)
T ss_pred hhhhhhhhhhhhhhh--heeeeEEecccchhhhccchHH--------HhhhhhccCCCCCchhhc-CCCCcceeEEEecc
Confidence 578899999999975 3666777777777788988887 79999999873 444332 33488999999765
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
. ++| +||++||+||.++|+.+++++. +++|+++.+++||.+|.++ ..+.|..|++-.+|+.
T Consensus 155 D~~iLSSadd~tVRLWD~rTgt~v~sL~~--~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~l 218 (334)
T KOG0278|consen 155 DKCILSSADDKTVRLWDHRTGTEVQSLEF--NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLL 218 (334)
T ss_pred CceEEeeccCCceEEEEeccCcEEEEEec--CCCCcceeeccCCCEEEEe-cCceeEEeccccccce
Confidence 4 554 7999999999999999999998 8999999999999876554 5888999999888775
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.6e-13 Score=118.51 Aligned_cols=134 Identities=14% Similarity=0.209 Sum_probs=101.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee----------EEecC-----
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL----------RVKDH----- 70 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl----------~~~~h----- 70 (248)
|+..+.+.+++|.+| ...|++++.+|-+...++++-|+ +|+|||+|+.++. ..+|.
T Consensus 85 Lsl~dNkylRYF~GH-~~~V~sL~~sP~~d~FlS~S~D~--------tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLif 155 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGH-KKRVNSLSVSPKDDTFLSSSLDK--------TVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIF 155 (311)
T ss_pred EEeecCceEEEcCCC-CceEEEEEecCCCCeEEecccCC--------eEEeeEecCCCCceEEecCCCcceeECCCCcEE
Confidence 556678899999987 69999999999776566666665 9999999965432 21111
Q ss_pred -----------------------------CCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCe--
Q psy2083 71 -----------------------------MYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF-- 116 (248)
Q Consensus 71 -----------------------------~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I-- 116 (248)
.-...++.|+|+||+ ++|.+.+.+.+-|.-+|....+++. ++..-
T Consensus 156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~-~~~~~~~ 234 (311)
T KOG1446|consen 156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSG-YPNAGNL 234 (311)
T ss_pred EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEee-ccCCCCc
Confidence 001357788899998 7788888899999999999998886 23322
Q ss_pred -eEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 117 -NNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 117 -n~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
-+.+|.|||..+++|++|++|++|.+..--+.-
T Consensus 235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 235 PLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVA 268 (311)
T ss_pred ceeEEECCCCcEEEEecCCCcEEEEEcCCCcEee
Confidence 489999999999999999999999985543333
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=131.68 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=98.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|..+.++..+ ..|.++.|.+++|..+++|+.+ |+|++||+|+++ |+... .+|..+|.+|.|.+..
T Consensus 604 d~~~~~~~~~~~~~--~~v~~v~~~~~~g~~latgs~d-------g~I~iwD~~~~~~~~~~~-~~h~~~V~~v~f~~~~ 673 (793)
T PLN00181 604 SINQGVSIGTIKTK--ANICCVQFPSESGRSLAFGSAD-------HKVYYYDLRNPKLPLCTM-IGHSKTVSYVRFVDSS 673 (793)
T ss_pred ECCCCcEEEEEecC--CCeEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCCccceEe-cCCCCCEEEEEEeCCC
Confidence 45567777777754 5788888877666655444443 499999999875 55443 2445899999998655
Q ss_pred --eeeeCCCeEEEEECCC------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDN------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~t------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++++.|++|+|||..+ ++++.++.+ |...+++++|+|++++|++|++|++|.+|+..
T Consensus 674 ~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~g-h~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 674 TLVSSSTDNTLKLWDLSMSISGINETPLHSFMG-HTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred EEEEEECCCEEEEEeCCCCccccCCcceEEEcC-CCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 5556899999999974 367888888 68999999999999999999999999999854
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.2e-13 Score=121.84 Aligned_cols=127 Identities=10% Similarity=0.203 Sum_probs=102.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d- 84 (248)
+-.+|-++.++.+| +..|..+....|+ .++++++.+. +|++|=+.++.+... .+|. .||.+|+|-|.
T Consensus 221 e~~tg~cv~t~~~h-~ewvr~v~v~~DG-ti~As~s~dq-------tl~vW~~~t~~~k~~lR~hE--h~vEci~wap~~ 289 (406)
T KOG0295|consen 221 ECDTGYCVKTFPGH-SEWVRMVRVNQDG-TIIASCSNDQ-------TLRVWVVATKQCKAELREHE--HPVECIAWAPES 289 (406)
T ss_pred ecccceeEEeccCc-hHhEEEEEecCCe-eEEEecCCCc-------eEEEEEeccchhhhhhhccc--cceEEEEecccc
Confidence 34578999999887 5677777666654 5555544443 999999999865544 4666 89999998763
Q ss_pred -------------c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 -------------Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 -------------~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ +. .+-|++||+||..+|.++-++-+ |...|.+++|+|.|.+|+++.+|+++++|++..+
T Consensus 290 ~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~ 366 (406)
T KOG0295|consen 290 SYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL 366 (406)
T ss_pred cCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc
Confidence 1 23 35699999999999999999999 7999999999999999999999999999998764
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-13 Score=134.65 Aligned_cols=117 Identities=13% Similarity=0.197 Sum_probs=98.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-----------------------C-----------
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-----------------------D----------- 62 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-----------------------~----------- 62 (248)
+...|.+.|+++.|++||.+|++||.|+ .|+||-+.. .
T Consensus 262 ~~~ah~gaIw~mKFS~DGKyLAsaGeD~--------virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 262 ISNAHKGAIWAMKFSHDGKYLASAGEDG--------VIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred cccccCCcEEEEEeCCCCceeeecCCCc--------eEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 4435589999999999999999999986 899999877 0
Q ss_pred --------------------------ceeEEecCCCCCCeeEEEEcCCc-ee-eeCCCeEEEEECCCCCEEEEeecCCCC
Q psy2083 63 --------------------------KPLRVKDHMYGLPIRDIKFHDNY-VL-SMDSSVVKIWSKDNGSLFTCIESGDQT 114 (248)
Q Consensus 63 --------------------------~pl~~~~h~~~~pI~sI~F~~d~-l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~ 114 (248)
+|++.+ -+|...|.+|.|+.++ |+ ++.|++||+|++...+++.+|. |..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef-~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~--Hnd 410 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEF-KGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS--HND 410 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhh-hccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe--cCC
Confidence 111111 1455889999999998 44 5689999999999999999998 489
Q ss_pred CeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 115 QFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 115 ~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
=|+|++|+| |..++++|+-|+++++|.||.
T Consensus 411 fVTcVaFnPvDDryFiSGSLD~KvRiWsI~d 441 (712)
T KOG0283|consen 411 FVTCVAFNPVDDRYFISGSLDGKVRLWSISD 441 (712)
T ss_pred eeEEEEecccCCCcEeecccccceEEeecCc
Confidence 999999999 779999999999999999987
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-13 Score=123.10 Aligned_cols=128 Identities=11% Similarity=0.198 Sum_probs=112.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|++..++.+| ...|..+++++..-++|++|.|+ +|+-|||...+-+..+ |+|=..|.++..||..
T Consensus 178 wDlatg~LkltltGh-i~~vr~vavS~rHpYlFs~gedk--------~VKCwDLe~nkvIR~Y-hGHlS~V~~L~lhPTl 247 (460)
T KOG0285|consen 178 WDLATGQLKLTLTGH-IETVRGVAVSKRHPYLFSAGEDK--------QVKCWDLEYNKVIRHY-HGHLSGVYCLDLHPTL 247 (460)
T ss_pred EEcccCeEEEeecch-hheeeeeeecccCceEEEecCCC--------eeEEEechhhhhHHHh-ccccceeEEEeccccc
Confidence 466789999999887 79999999999999999999996 8999999988765544 5555889999999986
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++ +.|.++||||.++...+.++.+ |..+|++|.+.|-.+.+++|+-|++|++||+..
T Consensus 248 dvl~t~grDst~RvWDiRtr~~V~~l~G-H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a 308 (460)
T KOG0285|consen 248 DVLVTGGRDSTIRVWDIRTRASVHVLSG-HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA 308 (460)
T ss_pred eeEEecCCcceEEEeeecccceEEEecC-CCCcceeEEeecCCCceEEecCCceEEEeeecc
Confidence 444 5799999999999999999998 799999999999888999999999999999754
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-13 Score=117.33 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=108.6
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEE
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~ 80 (248)
.|-.|-.+|+.++-+.+| -+.||++.|..++..+++++-|. ++++||-|+. +|+++.+.. ...|.+|.
T Consensus 83 v~vwDV~TGkv~Rr~rgH-~aqVNtV~fNeesSVv~SgsfD~--------s~r~wDCRS~s~ePiQildea-~D~V~Si~ 152 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGH-LAQVNTVRFNEESSVVASGSFDS--------SVRLWDCRSRSFEPIQILDEA-KDGVSSID 152 (307)
T ss_pred EEEEEcccCeeeeecccc-cceeeEEEecCcceEEEeccccc--------eeEEEEcccCCCCccchhhhh-cCceeEEE
Confidence 455678899999998887 69999999999888888888776 8999999986 789887643 36799999
Q ss_pred EcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 81 FHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 81 F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
..... |.+|-|+++|.+|++.|+....+-+ .|||+++|+|||+..++++-|+++++-+
T Consensus 153 v~~heIvaGS~DGtvRtydiR~G~l~sDy~g---~pit~vs~s~d~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 153 VAEHEIVAGSVDGTVRTYDIRKGTLSSDYFG---HPITSVSFSKDGNCSLASSLDSTLRLLD 211 (307)
T ss_pred ecccEEEeeccCCcEEEEEeecceeehhhcC---CcceeEEecCCCCEEEEeeccceeeecc
Confidence 99888 6667899999999999988776665 6999999999999999999999998855
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.5e-13 Score=131.16 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=100.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
..|...||++...|++.+++++|-|. +++||++....-+.+. -+|...|.+|.|+|.. ++ +|.|++||
T Consensus 460 ~aHdKdIN~Vaia~ndkLiAT~SqDk--------taKiW~le~~~l~~vL-sGH~RGvw~V~Fs~~dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 460 RAHDKDINCVAIAPNDKLIATGSQDK--------TAKIWDLEQLRLLGVL-SGHTRGVWCVSFSKNDQLLATCSGDKTVK 530 (775)
T ss_pred HhhcccccceEecCCCceEEeccccc--------ceeeecccCceEEEEe-eCCccceEEEEeccccceeEeccCCceEE
Confidence 34468999999999888777777776 9999999966666664 2445889999999985 44 46799999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||.+.++.++.+|++ |...|.-+.|..+|..|++|+.||-|++|.|..
T Consensus 531 IW~is~fSClkT~eG-H~~aVlra~F~~~~~qliS~~adGliKlWnikt 578 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEG-HTSAVLRASFIRNGKQLISAGADGLIKLWNIKT 578 (775)
T ss_pred EEEeccceeeeeecC-ccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence 999999999999999 799999999999999999999999999999854
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.4e-13 Score=115.38 Aligned_cols=123 Identities=11% Similarity=0.156 Sum_probs=106.3
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~ 92 (248)
.+..+ ++.|..+.|.-++.+.+++|+|. +||||+.-.+..+.++. +||..|..++.+.|. ++| +.|+
T Consensus 12 ~l~~~-qgaV~avryN~dGnY~ltcGsdr--------tvrLWNp~rg~liktYs-ghG~EVlD~~~s~Dnskf~s~GgDk 81 (307)
T KOG0316|consen 12 ILDCA-QGAVRAVRYNVDGNYCLTCGSDR--------TVRLWNPLRGALIKTYS-GHGHEVLDAALSSDNSKFASCGGDK 81 (307)
T ss_pred eeccc-ccceEEEEEccCCCEEEEcCCCc--------eEEeecccccceeeeec-CCCceeeeccccccccccccCCCCc
Confidence 34444 78999999998888888888887 99999999998888862 344789998887775 665 4799
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
.|.+||.+||+....+.+ |.+.||.+.|+.++..+++|+-|.+|++|+..+-.+.|
T Consensus 82 ~v~vwDV~TGkv~Rr~rg-H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~eP 137 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRG-HLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEP 137 (307)
T ss_pred eEEEEEcccCeeeeeccc-ccceeeEEEecCcceEEEeccccceeEEEEcccCCCCc
Confidence 999999999999999999 79999999999999999999999999999998876666
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.5e-13 Score=128.95 Aligned_cols=123 Identities=11% Similarity=0.161 Sum_probs=110.3
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
...+....++.+| .-.|.++.|+|.++.++++++|. |||||-|.+..++.+++ +|...|..++|-.++
T Consensus 492 le~~~l~~vLsGH-~RGvw~V~Fs~~dq~laT~SgD~--------TvKIW~is~fSClkT~e-GH~~aVlra~F~~~~~q 561 (775)
T KOG0319|consen 492 LEQLRLLGVLSGH-TRGVWCVSFSKNDQLLATCSGDK--------TVKIWSISTFSCLKTFE-GHTSAVLRASFIRNGKQ 561 (775)
T ss_pred ccCceEEEEeeCC-ccceEEEEeccccceeEeccCCc--------eEEEEEeccceeeeeec-CccceeEeeeeeeCCcE
Confidence 3367788888887 89999999999999999999886 99999999999999985 445899999998876
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++| +.||.||||++++++++.++.. |...|..+..+|++.++++|+.|+.|..|-
T Consensus 562 liS~~adGliKlWnikt~eC~~tlD~-H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 562 LISAGADGLIKLWNIKTNECEMTLDA-HNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred EEeccCCCcEEEEeccchhhhhhhhh-ccceeEEEeecCccceeEecCCCeEEEEee
Confidence 555 5799999999999999999999 799999999999999999999999999993
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-12 Score=125.60 Aligned_cols=162 Identities=12% Similarity=0.145 Sum_probs=126.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|-.+++.+..|+.| ++.|.+++.+|..-.++++++|. +||+||-... ...+++ .+|...|.+|+|+|.
T Consensus 82 fnynt~ekV~~FeAH-~DyIR~iavHPt~P~vLtsSDDm--------~iKlW~we~~wa~~qtf-eGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 82 FNYNTGEKVKTFEAH-SDYIRSIAVHPTLPYVLTSSDDM--------TIKLWDWENEWACEQTF-EGHEHYVMQVAFNPK 151 (794)
T ss_pred EecccceeeEEeecc-ccceeeeeecCCCCeEEecCCcc--------EEEEeeccCceeeeeEE-cCcceEEEEEEecCC
Confidence 567789999999998 79999999999877777877776 9999999887 444555 355689999999997
Q ss_pred c----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 85 Y----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 85 ~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
. +.+|-|++||+|...+..+.-|+++ |...||++++.|.| .+|++|++|.+|++||... +=|
T Consensus 152 D~ntFaS~sLDrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt-----k~C------ 219 (794)
T KOG0276|consen 152 DPNTFASASLDRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT-----KSC------ 219 (794)
T ss_pred CccceeeeeccccEEEEEcCCCCCceeeec-cccCcceEEeccCCCcceEEecCCCceEEEeecch-----HHH------
Confidence 4 5556899999999999899999998 79999999999865 6999999999999999753 123
Q ss_pred hhhhhccc--cccccC---CceeecHhHHhhcCCcc
Q psy2083 159 TEELEENI--IENVYD---DYKFVTRQELEDLGLGH 189 (248)
Q Consensus 159 tee~e~~~--~~~~yd---~y~fvt~~~l~~l~~~~ 189 (248)
++-||-|+ ...+|- =--++|-.|.-.+.|||
T Consensus 220 V~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 220 VQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred HHHhhcccccceEEEecCCCcEEEEecCCccEEEec
Confidence 45566542 122221 22356777777777766
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-13 Score=125.11 Aligned_cols=112 Identities=12% Similarity=0.155 Sum_probs=101.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD 98 (248)
.+.|-+++|+.|+.++++++-|+ .|++|-+++|.++..++..|...|+++.|+.|+ ++ ++.|.+|||--
T Consensus 263 d~aVlci~FSRDsEMlAsGsqDG--------kIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHG 334 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQDG--------KIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHG 334 (508)
T ss_pred ccceEEEeecccHHHhhccCcCC--------cEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEec
Confidence 36899999999999888877774 899999999999998876667899999999997 55 46899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++|+++..+.+ |++-||.+.|.+||..+++|+.|++|++|..
T Consensus 335 lKSGK~LKEfrG-HsSyvn~a~ft~dG~~iisaSsDgtvkvW~~ 377 (508)
T KOG0275|consen 335 LKSGKCLKEFRG-HSSYVNEATFTDDGHHIISASSDGTVKVWHG 377 (508)
T ss_pred cccchhHHHhcC-ccccccceEEcCCCCeEEEecCCccEEEecC
Confidence 999999999999 7999999999999999999999999999974
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-12 Score=119.67 Aligned_cols=129 Identities=14% Similarity=0.296 Sum_probs=103.7
Q ss_pred cchhcCceeEEEec-------CCCCCeeEEEEeCCCCc--EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe
Q psy2083 6 LRQDKGSLFTCIES-------GDQTQFNNLCHIPESGM--MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-------~~~~~V~~~~~~~~~g~--l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI 76 (248)
.+..+||.+-+..+ .+...+.++.|.|-+.. |+++|+- ||+|.|||+.+.++-.+..|. .+|
T Consensus 260 ~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v-------dG~i~iyD~a~~~~R~~c~he--~~V 330 (399)
T KOG0296|consen 260 VNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV-------DGTIAIYDLAASTLRHICEHE--DGV 330 (399)
T ss_pred EccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc-------cceEEEEecccchhheeccCC--Cce
Confidence 35567776666542 23456677777765443 4555544 479999999998887777776 789
Q ss_pred eEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 77 RDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 77 ~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|.++. ++++.+++|++||.++|+++.++.+ |..+|.+++++||..+++++++|++.++|.+|.
T Consensus 331 ~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G-H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~~ 399 (399)
T KOG0296|consen 331 TKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTG-HQMGILDFALSPQKRLVVTVSDDNTALVFEVPN 399 (399)
T ss_pred EEEEEcCcchheeeccCceEEeeeccccceEEEEec-CchheeEEEEcCCCcEEEEecCCCeEEEEecCC
Confidence 999999954 5567899999999999999999999 799999999999999999999999999999873
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.8e-12 Score=111.20 Aligned_cols=121 Identities=14% Similarity=0.269 Sum_probs=99.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeE---EecCCCCCCeeEEEEcCCc--e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLR---VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~---~~~h~~~~pI~sI~F~~d~--l 86 (248)
.++++++| .+.|..++++|-.|.++ ++|.|. +||+|+..++..+. +.+.+|...|++|+|+|.+ |
T Consensus 6 ~~~~~~gh-~~r~W~~awhp~~g~ilAscg~Dk--------~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~L 76 (312)
T KOG0645|consen 6 LEQKLSGH-KDRVWSVAWHPGKGVILASCGTDK--------AVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYL 76 (312)
T ss_pred eEEeecCC-CCcEEEEEeccCCceEEEeecCCc--------eEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEE
Confidence 45566666 78899999999646644 555554 89999999754433 3455677999999999998 5
Q ss_pred ee-eCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 87 LS-MDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ |-|.++-||-...| +++.+||+ |..+|.+++|+++|++|++++.|+.|.+|-+-
T Consensus 77 a~aSFD~t~~Iw~k~~~efecv~~lEG-HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~d 135 (312)
T KOG0645|consen 77 ASASFDATVVIWKKEDGEFECVATLEG-HENEVKCVAWSASGNYLATCSRDKSVWIWEID 135 (312)
T ss_pred EEeeccceEEEeecCCCceeEEeeeec-cccceeEEEEcCCCCEEEEeeCCCeEEEEEec
Confidence 55 46999999998865 68899999 79999999999999999999999999999876
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-12 Score=127.41 Aligned_cols=148 Identities=14% Similarity=0.243 Sum_probs=117.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~ 85 (248)
..++|+++-.+.+| .++|.+++|+|.+..|++++-|. |||+||+-++.- +-+..+. ..+..++|+|++
T Consensus 464 S~qTGqllDiLsGH-EgPVs~l~f~~~~~~LaS~SWDk--------TVRiW~if~s~~~vEtl~i~--sdvl~vsfrPdG 532 (893)
T KOG0291|consen 464 SVQTGQLLDILSGH-EGPVSGLSFSPDGSLLASGSWDK--------TVRIWDIFSSSGTVETLEIR--SDVLAVSFRPDG 532 (893)
T ss_pred EeecCeeeehhcCC-CCcceeeEEccccCeEEeccccc--------eEEEEEeeccCceeeeEeec--cceeEEEEcCCC
Confidence 35689999999887 79999999999988888888786 999999987632 3334444 568999999998
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC-------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG-------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~-------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+ +.-|+.|-|||.+.+..+.+|++. ....++.+|+++||++|++|++...|.+|++|
T Consensus 533 ~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 533 KELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred CeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 54 457999999999999888887761 12468999999999999999999999999998
Q ss_pred CCCCCCCc----cccccchhhhhhcc
Q psy2083 144 SLGPAPKW----CGFLDNLTEELEEN 165 (248)
Q Consensus 144 ~lG~aP~w----cs~ld~~tee~e~~ 165 (248)
.=-..-|| ..-||++-|-|...
T Consensus 613 ~~vllkkfqiS~N~sLdg~~efln~r 638 (893)
T KOG0291|consen 613 EGVLLKKFQISDNRSLDGVLEFLNRR 638 (893)
T ss_pred hhheeeeEEeccccchhHHHHHhccc
Confidence 75444444 24577777666543
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=120.53 Aligned_cols=117 Identities=15% Similarity=0.246 Sum_probs=99.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcCCc--ee-eeCCCeE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHDNY--VL-SMDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~d~--l~-Ssdd~~I 94 (248)
.|+..|+++.|+||+...+++|+|+ +|.|||=.++..+...+ -.|...|.+|+|+||+ ++ ++.|+++
T Consensus 188 ~HskFV~~VRysPDG~~Fat~gsDg--------ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~ 259 (603)
T KOG0318|consen 188 EHSKFVNCVRYSPDGSRFATAGSDG--------KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTI 259 (603)
T ss_pred ccccceeeEEECCCCCeEEEecCCc--------cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceE
Confidence 3468999999999987788888885 89999999998777653 3455899999999997 44 5689999
Q ss_pred EEEECCCCCEEEEeec------------------------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 95 KIWSKDNGSLFTCIES------------------------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 95 KIWD~~tGk~~~tie~------------------------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
||||..+++++.++.. +|...|+++..+||+..|++|+
T Consensus 260 KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs 339 (603)
T KOG0318|consen 260 KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS 339 (603)
T ss_pred EEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec
Confidence 9999999887666421 3788999999999999999999
Q ss_pred CCCeEEEEEcCC
Q psy2083 133 ENKKILTYYIPS 144 (248)
Q Consensus 133 ed~~I~~w~Ip~ 144 (248)
-|+.|.-|++..
T Consensus 340 yDG~I~~W~~~~ 351 (603)
T KOG0318|consen 340 YDGHINSWDSGS 351 (603)
T ss_pred cCceEEEEecCC
Confidence 999999999865
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-12 Score=116.04 Aligned_cols=120 Identities=11% Similarity=0.182 Sum_probs=98.3
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVV 94 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~I 94 (248)
.||.+.|+++.|.|++..++++|.|. .|.||.+-.. +..++. -+|...|..+.|.+|+ |+ ++.|++|
T Consensus 44 ~gh~geI~~~~F~P~gs~~aSgG~Dr--------~I~LWnv~gdceN~~~l-kgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 44 PGHKGEIYTIKFHPDGSCFASGGSDR--------AIVLWNVYGDCENFWVL-KGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred CCCcceEEEEEECCCCCeEeecCCcc--------eEEEEeccccccceeee-ccccceeEeeeeccCCCEEEEecCCceE
Confidence 34589999999999877787888886 8999997754 344442 1445999999999998 55 4689999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+.||.++|+....+.+ |..-+|+++... +..|+.+|++|+++++||+..-+++
T Consensus 115 ~~wD~~tG~~~rk~k~-h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~ 168 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKG-HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI 168 (338)
T ss_pred EEEecccceeeehhcc-ccceeeecCccccCCeEEEecCCCceEEEEeecccchh
Confidence 9999999999999998 689999988544 4478889999999999999876665
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-12 Score=113.90 Aligned_cols=127 Identities=11% Similarity=0.152 Sum_probs=104.9
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC---
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d--- 84 (248)
...|.-+-+..+| ++.|+++...-++..+++++.|. +++|||+.+|+.+.....+ .||+.+.|+.+
T Consensus 39 s~nGerlGty~GH-tGavW~~Did~~s~~liTGSAD~--------t~kLWDv~tGk~la~~k~~--~~Vk~~~F~~~gn~ 107 (327)
T KOG0643|consen 39 SLNGERLGTYDGH-TGAVWCCDIDWDSKHLITGSADQ--------TAKLWDVETGKQLATWKTN--SPVKRVDFSFGGNL 107 (327)
T ss_pred ecCCceeeeecCC-CceEEEEEecCCcceeeeccccc--------eeEEEEcCCCcEEEEeecC--CeeEEEeeccCCcE
Confidence 3478888888887 89999999998899999999887 9999999999988776544 67777777651
Q ss_pred ---------------------------------------------------c--eeee-CCCeEEEEECCCCCE-EEEee
Q psy2083 85 ---------------------------------------------------Y--VLSM-DSSVVKIWSKDNGSL-FTCIE 109 (248)
Q Consensus 85 ---------------------------------------------------~--l~Ss-dd~~IKIWD~~tGk~-~~tie 109 (248)
+ |+++ +|+.|.+||+++|+. +.+.+
T Consensus 108 ~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~ 187 (327)
T KOG0643|consen 108 ILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDE 187 (327)
T ss_pred EEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechh
Confidence 1 4444 688999999999854 44555
Q ss_pred cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 110 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 110 ~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
- |...||+++++||..++++|+.|.+-++||+..|-
T Consensus 188 ~-h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~ 223 (327)
T KOG0643|consen 188 E-HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE 223 (327)
T ss_pred h-hccccccccccCCcceEEecccCccceeeecccee
Confidence 5 68999999999999999999999999999987763
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.5e-12 Score=115.67 Aligned_cols=114 Identities=12% Similarity=0.249 Sum_probs=92.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIW 97 (248)
.+.|..+.|+|....++++|+-+ |+||+||+... .+.-.-.+.++.||.+++|+.|+ |.+ +-|+.+|+|
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD-------~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWD-------GTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLW 99 (347)
T ss_pred ccchheeEeccccCceEEecccC-------CceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEE
Confidence 57899999999666677666654 59999999874 43333345566999999999998 555 569999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCC--EEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESG--MMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsg--ll~sa~ed~~I~~w~Ip~ 144 (248)
|+.+|+ +..+.. |..+|..+.|.+... +|++|+-|++++.||..+
T Consensus 100 DL~S~Q-~~~v~~-Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 100 DLASGQ-VSQVAA-HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred EccCCC-eeeeee-cccceeEEEEecCCCcceeEecccccceeecccCC
Confidence 999995 556677 699999999988766 999999999999999765
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.3e-12 Score=112.17 Aligned_cols=171 Identities=13% Similarity=0.195 Sum_probs=129.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~---- 85 (248)
.+..++.. +.+-++++++.... ++++++|+ +++|||+--+ +|+.. ++|. ..|.+|.+++..
T Consensus 53 e~~s~d~~--D~LfdV~Wse~~e~~~~~a~GDG--------SLrl~d~~~~s~Pi~~~kEH~--~EV~Svdwn~~~r~~~ 120 (311)
T KOG0277|consen 53 ECQSYDTE--DGLFDVAWSENHENQVIAASGDG--------SLRLFDLTMPSKPIHKFKEHK--REVYSVDWNTVRRRIF 120 (311)
T ss_pred EEEeeecc--cceeEeeecCCCcceEEEEecCc--------eEEEeccCCCCcchhHHHhhh--hheEEeccccccceeE
Confidence 44455553 68899999986655 55666664 9999997654 78876 4665 889999999763
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCC-----CCCCccccccchh
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLG-----PAPKWCGFLDNLT 159 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG-----~aP~wcs~ld~~t 159 (248)
++||-|++||+||..-++-++|+.+ |..-|-.+.|+| ..+++++++.|++.++|++..-| |||. +|-|+
T Consensus 121 ltsSWD~TiKLW~~~r~~Sv~Tf~g-h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~----~Eil~ 195 (311)
T KOG0277|consen 121 LTSSWDGTIKLWDPNRPNSVQTFNG-HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN----SEILC 195 (311)
T ss_pred EeeccCCceEeecCCCCcceEeecC-CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc----ceeEe
Confidence 7778899999999999999999998 699999999999 55899999999999999987643 2221 12222
Q ss_pred hhhhccccccccCCceeecHhHHhhcCCccc--cCCCcccccceeeeec
Q psy2083 160 EELEENIIENVYDDYKFVTRQELEDLGLGHL--IGTSLLRAYMHGFFMD 206 (248)
Q Consensus 160 ee~e~~~~~~~yd~y~fvt~~~l~~l~~~~l--igt~~l~~ymhgyf~~ 206 (248)
=.+ .-|+++..+|-.-...+..+.+ +-||+---|-|||-|.
T Consensus 196 cdw------~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 196 CDW------SKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVR 238 (311)
T ss_pred ecc------cccCCcEEEecCCCceEEEEehhhccccceeecCCceEEE
Confidence 211 2488888999877776766663 3377777799999874
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.3e-12 Score=116.98 Aligned_cols=127 Identities=14% Similarity=0.274 Sum_probs=105.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|-.+|..+..+.+| ....+.++-.|...++++++.|. +.+|||+|..-+-....++|...|+++.|..+.
T Consensus 299 wDVEtge~v~~LtGH-d~ELtHcstHptQrLVvTsSrDt--------TFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 299 WDVETGEVVNILTGH-DSELTHCSTHPTQRLVVTSSRDT--------TFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eeeccCceeccccCc-chhccccccCCcceEEEEeccCc--------eeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 456778888888887 57888888888666666777775 999999997655443345667999999999887
Q ss_pred --eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.++||++|||||+++ ..++.+|.. .+++|-++++..+.+|+..-+.++|++|++.
T Consensus 370 ~vVSgSDDrTvKvWdLrNMRsplATIRt--dS~~NRvavs~g~~iIAiPhDNRqvRlfDln 428 (481)
T KOG0300|consen 370 RVVSGSDDRTVKVWDLRNMRSPLATIRT--DSPANRVAVSKGHPIIAIPHDNRQVRLFDLN 428 (481)
T ss_pred ceeecCCCceEEEeeeccccCcceeeec--CCccceeEeecCCceEEeccCCceEEEEecC
Confidence 5557999999999987 679999998 8999999999999999999999999999964
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.7e-12 Score=119.17 Aligned_cols=119 Identities=16% Similarity=0.273 Sum_probs=97.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCC---------cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESG---------MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g---------~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~ 80 (248)
+.+...+..| +..|.++.++|.+. ++++++.| ++|++||+.++.|+.++ .|+ .||.+|+
T Consensus 391 ~~~~~~l~~H-skei~t~~wsp~g~v~~n~~~~~~l~sas~d--------stV~lwdv~~gv~i~~f~kH~--~pVysva 459 (524)
T KOG0273|consen 391 SNSVHDLQAH-SKEIYTIKWSPTGPVTSNPNMNLMLASASFD--------STVKLWDVESGVPIHTLMKHQ--EPVYSVA 459 (524)
T ss_pred Ccchhhhhhh-ccceeeEeecCCCCccCCCcCCceEEEeecC--------CeEEEEEccCCceeEeeccCC--CceEEEE
Confidence 3344445555 67888888888543 24444444 59999999999999997 565 9999999
Q ss_pred EcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++++ -|+.|.||+..+|+.++++.+ ...|+.|||+.+|..|.++-.|+.+.+-++
T Consensus 460 fS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~--~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 460 FSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG--TGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred ecCCCcEEEecCCCCeeEeccccchheeEeecC--CCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 99998 6665 599999999999999999998 788999999999999998888998887665
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=114.91 Aligned_cols=115 Identities=16% Similarity=0.290 Sum_probs=98.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc-----ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-----VL 87 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-----l~ 87 (248)
+-.++.| .+.+++++.+ +-+++++|+|. +|+|||+++.+.+... .|. +.|+++.|.+.. |+
T Consensus 36 lF~~~aH-~~sitavAVs--~~~~aSGssDe--------tI~IYDm~k~~qlg~ll~Ha--gsitaL~F~~~~S~shLlS 102 (362)
T KOG0294|consen 36 LFAFSAH-AGSITALAVS--GPYVASGSSDE--------TIHIYDMRKRKQLGILLSHA--GSITALKFYPPLSKSHLLS 102 (362)
T ss_pred ccccccc-ccceeEEEec--ceeEeccCCCC--------cEEEEeccchhhhcceeccc--cceEEEEecCCcchhheee
Confidence 3344555 7889998887 45788888887 9999999999887764 554 899999999874 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++|+.|-|||....+++.++.+ |...||+++++|.|.+-++.+.|..+.+|.+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~-H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKA-HKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecc-cccccceeEecCCCceEEEEcCCceeeeehh
Confidence 57999999999999999999999 6889999999999999999999999999975
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.2e-12 Score=116.43 Aligned_cols=117 Identities=13% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCeeEEEEeCCCCc--EE-EeecC----ceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--eee-eC
Q psy2083 22 QTQFNNLCHIPESGM--MF-IANEN----KKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VLS-MD 90 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~--l~-~ag~d----~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~S-sd 90 (248)
+-.|-.+.+.|...+ +. +++++ --.+++-|++||+||+.+++.+.+. +|. ..|..++|+|.+ |+| +|
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghd--nwVr~~af~p~Gkyi~ScaD 354 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHD--NWVRGVAFSPGGKYILSCAD 354 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEeccc--ceeeeeEEcCCCeEEEEEec
Confidence 456666666664332 11 12211 1125556679999999999998875 555 899999999998 555 69
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++++||.+++++..++++ |+.=++++.|..+..++++|+-|.++++|.
T Consensus 355 Dktlrvwdl~~~~cmk~~~a-h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 355 DKTLRVWDLKNLQCMKTLEA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred CCcEEEEEeccceeeeccCC-CcceeEEEecCCCCceEEeccccceeeeee
Confidence 99999999999999999999 699999999999999999999999999996
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.5e-12 Score=116.34 Aligned_cols=118 Identities=13% Similarity=0.282 Sum_probs=98.8
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
.|+++-.| .+.|+.+.|.|....|++++.|+ +|+|||+... +...++.. ..||.+|+|||.+ +
T Consensus 164 vIRTlYDH-~devn~l~FHPre~ILiS~srD~--------tvKlFDfsK~saKrA~K~~qd--~~~vrsiSfHPsGefll 232 (430)
T KOG0640|consen 164 VIRTLYDH-VDEVNDLDFHPRETILISGSRDN--------TVKLFDFSKTSAKRAFKVFQD--TEPVRSISFHPSGEFLL 232 (430)
T ss_pred eEeehhhc-cCcccceeecchhheEEeccCCC--------eEEEEecccHHHHHHHHHhhc--cceeeeEeecCCCceEE
Confidence 67776665 78999999999888788877775 9999999764 22333322 3799999999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++.+..++++||++|-+++.+-.| +|...|++|..++.|.+-++|+.||.|++|+
T Consensus 233 vgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 233 VGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWD 289 (430)
T ss_pred EecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeec
Confidence 567888999999999999887765 3678999999999999999999999999998
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-11 Score=121.53 Aligned_cols=125 Identities=10% Similarity=0.188 Sum_probs=99.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|+|..++.+| ++.| .+...- .-.+.+++.|. +|++||+.+++.+.+.. +|..+|++|..+.+.
T Consensus 277 d~~sg~C~~~l~gh-~stv-~~~~~~-~~~~~sgs~D~--------tVkVW~v~n~~~l~l~~-~h~~~V~~v~~~~~~l 344 (537)
T KOG0274|consen 277 DCSTGECTHSLQGH-TSSV-RCLTID-PFLLVSGSRDN--------TVKVWDVTNGACLNLLR-GHTGPVNCVQLDEPLL 344 (537)
T ss_pred ecCCCcEEEEecCC-CceE-EEEEcc-CceEeeccCCc--------eEEEEeccCcceEEEec-cccccEEEEEecCCEE
Confidence 46789999999987 4443 333222 22344445554 99999999998888875 245999999999666
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++++.|++|++||+.++++++++.+ |...|.++.+.+. ..+++|+.|+.|++|++..+
T Consensus 345 vsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 345 VSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK 402 (537)
T ss_pred EEEecCceEEEEEhhhceeeeeecC-CcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence 6667899999999999999999999 7999999876554 89999999999999998765
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-11 Score=108.21 Aligned_cols=119 Identities=8% Similarity=0.215 Sum_probs=100.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCeeEEEEcCCc--e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI~sI~F~~d~--l 86 (248)
++++++++| ...|-+++|++++.+|++++.|. .|=+|.+.....+ .+. +.|...|+-|.|||.. |
T Consensus 96 ecv~~lEGH-EnEVK~Vaws~sG~~LATCSRDK--------SVWiWe~deddEfec~aVL-~~HtqDVK~V~WHPt~dlL 165 (312)
T KOG0645|consen 96 ECVATLEGH-ENEVKCVAWSASGNYLATCSRDK--------SVWIWEIDEDDEFECIAVL-QEHTQDVKHVIWHPTEDLL 165 (312)
T ss_pred eEEeeeecc-ccceeEEEEcCCCCEEEEeeCCC--------eEEEEEecCCCcEEEEeee-ccccccccEEEEcCCccee
Confidence 588889998 68999999999888899999987 8999999976433 332 3444789999999975 5
Q ss_pred ee-eCCCeEEEEECCC---CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LS-MDSSVVKIWSKDN---GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~t---Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+| |-|++||+|+... -.++++|++ |...|.++.|.|+|..|+++++|+++++|-
T Consensus 166 ~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 166 FSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAFDNIGSRLVSCSDDGTVSIWR 223 (312)
T ss_pred EEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEecCCCceEEEecCCcceEeee
Confidence 55 5799999999873 358899998 688999999999999999999999999996
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.5e-13 Score=120.52 Aligned_cols=165 Identities=13% Similarity=0.249 Sum_probs=125.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d 84 (248)
|-.+|+++.++-+| -.+|-.+.|+ +|++++++-|. ++++||+-++..+.. .--+|...||.|.|+..
T Consensus 263 Dv~tge~l~tlihH-ceaVLhlrf~--ng~mvtcSkDr--------siaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k 331 (499)
T KOG0281|consen 263 DVNTGEPLNTLIHH-CEAVLHLRFS--NGYMVTCSKDR--------SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 331 (499)
T ss_pred eccCCchhhHHhhh-cceeEEEEEe--CCEEEEecCCc--------eeEEEeccCchHHHHHHHHhhhhhheeeeccccc
Confidence 44578888886665 6788888887 47888887776 899999998754321 12344599999999988
Q ss_pred cee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhh
Q psy2083 85 YVL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELE 163 (248)
Q Consensus 85 ~l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e 163 (248)
.|+ +|.|++||+|+..|++++.++.+ |.-.|- |.-.+|.++++|+.|.+|++|+|. |.-+=.+.|.-|
T Consensus 332 yIVsASgDRTikvW~~st~efvRtl~g-HkRGIA--ClQYr~rlvVSGSSDntIRlwdi~--------~G~cLRvLeGHE 400 (499)
T KOG0281|consen 332 YIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIA--CLQYRDRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHE 400 (499)
T ss_pred eEEEecCCceEEEEeccceeeehhhhc-ccccce--ehhccCeEEEecCCCceEEEEecc--------ccHHHHHHhchH
Confidence 744 56899999999999999999999 688897 455689999999999999999986 455666666666
Q ss_pred ccccccccCCceeecHhHHhhcCCccccCC
Q psy2083 164 ENIIENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 164 ~~~~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
|--..--||+=|-|+-.=.-++.+|+|.-.
T Consensus 401 eLvRciRFd~krIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 401 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred HhhhheeecCceeeeccccceEEEEecccc
Confidence 543344477777777666666666666554
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=119.70 Aligned_cols=125 Identities=10% Similarity=0.116 Sum_probs=104.2
Q ss_pred cchhcCceeEE-EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~-~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.+...|..+.+ +.+| .+.|.++++..-+..+++++.|. ++++||+.++....+.. +|...|.++...+.
T Consensus 233 ~~~~~~~~i~~~l~GH-~g~V~~l~~~~~~~~lvsgS~D~--------t~rvWd~~sg~C~~~l~-gh~stv~~~~~~~~ 302 (537)
T KOG0274|consen 233 WDLNNGYLILTRLVGH-FGGVWGLAFPSGGDKLVSGSTDK--------TERVWDCSTGECTHSLQ-GHTSSVRCLTIDPF 302 (537)
T ss_pred eecccceEEEeeccCC-CCCceeEEEecCCCEEEEEecCC--------cEEeEecCCCcEEEEec-CCCceEEEEEccCc
Confidence 45566777777 7776 89999998877555677777775 99999999999988863 44478888888776
Q ss_pred cee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 85 YVL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 85 ~l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.++ ++-|.+||+||..+|..+.++.+ |..+|+++... ++++++|+.|++|++|++.
T Consensus 303 ~~~sgs~D~tVkVW~v~n~~~l~l~~~-h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNGACLNLLRG-HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred eEeeccCCceEEEEeccCcceEEEecc-ccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 644 46899999999999999999998 79999988876 8999999999999999976
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.5e-12 Score=122.31 Aligned_cols=162 Identities=15% Similarity=0.172 Sum_probs=121.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-------------EEecCCCCCCeeEEE
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-------------RVKDHMYGLPIRDIK 80 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-------------~~~~h~~~~pI~sI~ 80 (248)
++.++..+...|+++.|++.+++++++++.. ..+|+|=.....+ .+++| -..+++.+
T Consensus 206 fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a--------qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGH--ia~lt~g~ 275 (641)
T KOG0772|consen 206 FRQLQPCETHQINSLQYSVTGDQILVVSGSA--------QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGH--IAELTCGC 275 (641)
T ss_pred hhccCcccccccceeeecCCCCeEEEEecCc--------ceeEEccCCceeeeeeccchhhhhhhccCCc--eeeeeccc
Confidence 4445544455899999999888877777765 7899994432211 13334 37899999
Q ss_pred EcCCc----eeeeCCCeEEEEECCCCC-EEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 81 FHDNY----VLSMDSSVVKIWSKDNGS-LFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 81 F~~d~----l~Ssdd~~IKIWD~~tGk-~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
|||.. +.+++|+++||||.++-+ .+..|.+ +-..++++++|+|||.+|++|+.||.|++|+.+..+.-|..
T Consensus 276 whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~ 355 (641)
T KOG0772|consen 276 WHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVM 355 (641)
T ss_pred cccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccce
Confidence 99986 777899999999998754 3333432 12468899999999999999999999999999999988877
Q ss_pred cc---ccc--chhhhhhccccccccCCceeecHhHHhhcCCcccc
Q psy2083 152 CG---FLD--NLTEELEENIIENVYDDYKFVTRQELEDLGLGHLI 191 (248)
Q Consensus 152 cs---~ld--~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~~li 191 (248)
|= ++. .||- ..+-||+-..+|+.....|.+|.|-
T Consensus 356 ~vk~AH~~g~~Its------i~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 356 KVKDAHLPGQDITS------ISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred EeeeccCCCCceeE------EEeccccchhhhccCCCceeeeecc
Confidence 71 222 2222 4566999999999999999998764
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.5e-11 Score=106.18 Aligned_cols=159 Identities=16% Similarity=0.241 Sum_probs=119.1
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec---CCCC---CCeeEEEEcC
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD---HMYG---LPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~---h~~~---~pI~sI~F~~ 83 (248)
+|.-+.-+.+| .+.|-.+-.+ +|.+|++|+.++ +|+.||+|-+..+.+.+ |+-+ ..|.+|+..|
T Consensus 172 ~g~~~~a~sgh-tghilalysw--n~~m~~sgsqdk-------tirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp 241 (350)
T KOG0641|consen 172 RGQGFHALSGH-TGHILALYSW--NGAMFASGSQDK-------TIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP 241 (350)
T ss_pred CCCcceeecCC-cccEEEEEEe--cCcEEEccCCCc-------eEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence 34444555554 6777776555 456666666654 99999999987777653 3333 5799999999
Q ss_pred Cc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhh
Q psy2083 84 NY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTE 160 (248)
Q Consensus 84 d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~te 160 (248)
.+ ++++ .|....++|++-|+.++.+.| |.++|++|.|+|.-.++++++-|.+|++-++.- .|+.
T Consensus 242 sgrll~sg~~dssc~lydirg~r~iq~f~p-hsadir~vrfsp~a~yllt~syd~~ikltdlqg------------dla~ 308 (350)
T KOG0641|consen 242 SGRLLASGHADSSCMLYDIRGGRMIQRFHP-HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG------------DLAH 308 (350)
T ss_pred CcceeeeccCCCceEEEEeeCCceeeeeCC-CccceeEEEeCCCceEEEEecccceEEEeeccc------------chhh
Confidence 98 5555 588888999999999999999 699999999999999999999999999987642 3444
Q ss_pred hhh-----cccc--cc---ccCCceeecHhHHhhcCCcccc
Q psy2083 161 ELE-----ENII--EN---VYDDYKFVTRQELEDLGLGHLI 191 (248)
Q Consensus 161 e~e-----~~~~--~~---~yd~y~fvt~~~l~~l~~~~li 191 (248)
||. |++. .+ --.|+-|++.+..+..-||.|-
T Consensus 309 el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 309 ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 443 2211 11 1468999999888888777654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-11 Score=113.91 Aligned_cols=122 Identities=6% Similarity=0.150 Sum_probs=100.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
++..+.++++| ...|..+.|.+ .+.+++++-|. +|+.||+.+++........ .++++|..+|.. |+
T Consensus 249 ~r~P~vtl~GH-t~~Vs~V~w~d-~~v~yS~SwDH--------TIk~WDletg~~~~~~~~~--ksl~~i~~~~~~~Ll~ 316 (423)
T KOG0313|consen 249 TRTPLVTLEGH-TEPVSSVVWSD-ATVIYSVSWDH--------TIKVWDLETGGLKSTLTTN--KSLNCISYSPLSKLLA 316 (423)
T ss_pred ccCceEEeccc-ccceeeEEEcC-CCceEeecccc--------eEEEEEeecccceeeeecC--cceeEeecccccceee
Confidence 35588888887 78887777776 77788988886 9999999999877766544 789999999976 44
Q ss_pred -eeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+.|++||+++|. ...++-+ |...|.++.++|.. -+|++|+-|+++++||+.+
T Consensus 317 ~gssdr~irl~DPR~~~gs~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS 377 (423)
T KOG0313|consen 317 SGSSDRHIRLWDPRTGDGSVVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS 377 (423)
T ss_pred ecCCCCceeecCCCCCCCceeEEeeec-chhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence 4589999999999864 3456777 79999999999955 7788999999999999976
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.3e-12 Score=124.83 Aligned_cols=119 Identities=14% Similarity=0.185 Sum_probs=103.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S 88 (248)
.+..+-+| .+.|-++.++. ++.|++++-|. |||||++-+..+|.++.|. ..|+||+|+|-. |.+
T Consensus 361 P~~ef~GH-t~DILDlSWSK-n~fLLSSSMDK--------TVRLWh~~~~~CL~~F~Hn--dfVTcVaFnPvDDryFiSG 428 (712)
T KOG0283|consen 361 PFCEFKGH-TADILDLSWSK-NNFLLSSSMDK--------TVRLWHPGRKECLKVFSHN--DFVTCVAFNPVDDRYFISG 428 (712)
T ss_pred chhhhhcc-chhheeccccc-CCeeEeccccc--------cEEeecCCCcceeeEEecC--CeeEEEEecccCCCcEeec
Confidence 44455565 89999999887 77899999997 9999999999999999887 899999999964 666
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|-|+.||||++-..+.+.-.+- ..-|+.+||.|||+..++|+-+|...+|.+..|
T Consensus 429 SLD~KvRiWsI~d~~Vv~W~Dl--~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l 483 (712)
T KOG0283|consen 429 SLDGKVRLWSISDKKVVDWNDL--RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL 483 (712)
T ss_pred ccccceEEeecCcCeeEeehhh--hhhheeEEeccCCceEEEEEeccEEEEEEccCC
Confidence 7899999999998777766666 578999999999999999999999999987654
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-11 Score=114.88 Aligned_cols=123 Identities=12% Similarity=0.234 Sum_probs=93.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
+-.+..+| .+.|+++.|.|-++.++++|+.+ ++|+|||+|.- +|+.+.. +|...|.+|.|+|+. ++|
T Consensus 264 ~~~~~~ah-~~~vn~~~fnp~~~~ilAT~S~D-------~tV~LwDlRnL~~~lh~~e-~H~dev~~V~WSPh~etvLAS 334 (422)
T KOG0264|consen 264 PSHSVKAH-SAEVNCVAFNPFNEFILATGSAD-------KTVALWDLRNLNKPLHTFE-GHEDEVFQVEWSPHNETVLAS 334 (422)
T ss_pred Cccccccc-CCceeEEEeCCCCCceEEeccCC-------CcEEEeechhcccCceecc-CCCcceEEEEeCCCCCceeEe
Confidence 34444554 79999999999999877665543 39999999984 6676653 344899999999986 444
Q ss_pred -eCCCeEEEEECCC-CCEEE------------EeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDN-GSLFT------------CIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~t-Gk~~~------------tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
+.|+.+.+||+.. |+... -+.++|.+.|+++.|+|+- -+|+++++|+.+++|..+.
T Consensus 335 Sg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 335 SGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 4799999999875 22211 2334689999999999977 5688899999999998653
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-11 Score=109.72 Aligned_cols=139 Identities=11% Similarity=0.167 Sum_probs=109.9
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+.-++||.+| .+-|..++|+|-.+.+|++.+.+ |+++|||+|.+ +++.+..|. ..|.++.|+.-.
T Consensus 133 ~~~r~~Sv~Tf~gh-~~~Iy~a~~sp~~~nlfas~Sgd-------~~l~lwdvr~~gk~~~i~ah~--~Eil~cdw~ky~ 202 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGH-NSCIYQAAFSPHIPNLFASASGD-------GTLRLWDVRSPGKFMSIEAHN--SEILCCDWSKYN 202 (311)
T ss_pred cCCCCcceEeecCC-ccEEEEEecCCCCCCeEEEccCC-------ceEEEEEecCCCceeEEEecc--ceeEeecccccC
Confidence 45566778888776 79999999999888877554443 49999999985 777777777 889999998653
Q ss_pred ---eee-eCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchh
Q psy2083 86 ---VLS-MDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLT 159 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~t 159 (248)
+++ +.|+.||+||+++ ..++..+.+ |.-.|+.+.|+|.. .+|++|+-|-++++|+.. -=|++.
T Consensus 203 ~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g-h~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~----------~~ds~~ 271 (311)
T KOG0277|consen 203 HNVLATGGVDNLVRGWDIRNLRTPLFELNG-HGLAVRKVKFSPHHASLLASASYDMTVRIWDPE----------RQDSAI 271 (311)
T ss_pred CcEEEecCCCceEEEEehhhccccceeecC-CceEEEEEecCcchhhHhhhccccceEEecccc----------cchhhh
Confidence 554 5799999999997 557778877 69999999999965 899999999999999742 235666
Q ss_pred hhhhccc
Q psy2083 160 EELEENI 166 (248)
Q Consensus 160 ee~e~~~ 166 (248)
|-.+.+.
T Consensus 272 e~~~~Ht 278 (311)
T KOG0277|consen 272 ETVDHHT 278 (311)
T ss_pred hhhhccc
Confidence 6666553
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=115.00 Aligned_cols=125 Identities=17% Similarity=0.312 Sum_probs=105.4
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---------CCceeEEecCCCCCCeeEE
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---------ADKPLRVKDHMYGLPIRDI 79 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---------s~~pl~~~~h~~~~pI~sI 79 (248)
.+|+++..+..| ...|+.+.|+.|+.++|++|-|+ .|.+|++- +.+|+..+ +.|+.+|+++
T Consensus 111 ssG~LL~v~~aH-YQ~ITcL~fs~dgs~iiTgskDg--------~V~vW~l~~lv~a~~~~~~~p~~~f-~~HtlsITDl 180 (476)
T KOG0646|consen 111 SSGILLNVLSAH-YQSITCLKFSDDGSHIITGSKDG--------AVLVWLLTDLVSADNDHSVKPLHIF-SDHTLSITDL 180 (476)
T ss_pred ccccHHHHHHhh-ccceeEEEEeCCCcEEEecCCCc--------cEEEEEEEeecccccCCCccceeee-ccCcceeEEE
Confidence 578888888665 89999999999998898988885 89999863 34677776 3456999999
Q ss_pred EEcCCc----ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 80 KFHDNY----VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 80 ~F~~d~----l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.-.+.+ |. +|.|++||+||+..|.++.++.. +.+|+++++.|-...+++|+++|+|.+-.+-.+
T Consensus 181 ~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f--p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~ 249 (476)
T KOG0646|consen 181 QIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF--PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKL 249 (476)
T ss_pred EecCCCccceEEEecCCceEEEEEeccceeeEEEec--CCcceeEEEcccccEEEecCCcceEEeeehhcC
Confidence 877664 55 46899999999999999999998 899999999999999999999999987765554
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=108.93 Aligned_cols=124 Identities=14% Similarity=0.193 Sum_probs=99.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+..++..+..+ .+.++.+.+.|-+..++++.+++ .|..||+|+++.+...+..|+..|++++|+++. |
T Consensus 136 s~ep~~kI~t~-~skit~a~Wg~l~~~ii~Ghe~G--------~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~Fi 206 (327)
T KOG0643|consen 136 SEEPYLKIPTP-DSKITSALWGPLGETIIAGHEDG--------SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFI 206 (327)
T ss_pred ccCceEEecCC-ccceeeeeecccCCEEEEecCCC--------cEEEEEcccCceeeechhhhccccccccccCCcceEE
Confidence 44456667766 47889999999877777777664 899999999987776555555899999999997 7
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec------------------------------------------------------CC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES------------------------------------------------------GD 112 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~------------------------------------------------------~h 112 (248)
.+|-|.+-|+||.++-.++.++.. +|
T Consensus 207 T~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGH 286 (327)
T KOG0643|consen 207 TGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGH 286 (327)
T ss_pred ecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcccccc
Confidence 778899999999987555444321 26
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-.|||+|+|+|+|....+|+||+.|++...
T Consensus 287 FGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 287 FGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred ccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 789999999999999999999999998754
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-12 Score=125.03 Aligned_cols=123 Identities=17% Similarity=0.250 Sum_probs=98.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++++.|..| +-.|++++|++-.-.++.+|+.+ |+||+||+|+.+...++- ++...|++|.|+|.. .++
T Consensus 124 k~l~~f~EH-~Rs~~~ldfh~tep~iliSGSQD-------g~vK~~DlR~~~S~~t~~-~nSESiRDV~fsp~~~~~F~s 194 (839)
T KOG0269|consen 124 KLLTVFNEH-ERSANKLDFHSTEPNILISGSQD-------GTVKCWDLRSKKSKSTFR-SNSESIRDVKFSPGYGNKFAS 194 (839)
T ss_pred hhhhHhhhh-ccceeeeeeccCCccEEEecCCC-------ceEEEEeeeccccccccc-ccchhhhceeeccCCCceEEE
Confidence 455566555 68999999998766666666654 599999999988766653 345789999999975 444
Q ss_pred -eCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|.|++.+||++. .++...+.. |..+|-++-++||+++|++|+.|++|++|+.-.
T Consensus 195 ~~dsG~lqlWDlRqp~r~~~k~~A-H~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~ 251 (839)
T KOG0269|consen 195 IHDSGYLQLWDLRQPDRCEKKLTA-HNGPVLCLNWHPNREWLATGGRDKMVKIWDMTD 251 (839)
T ss_pred ecCCceEEEeeccCchhHHHHhhc-ccCceEEEeecCCCceeeecCCCccEEEEeccC
Confidence 4889999999985 345666777 699999999999999999999999999999753
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=116.14 Aligned_cols=127 Identities=9% Similarity=0.156 Sum_probs=100.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
||+++--+++.+.+| +..|..+.|.|+++.+++.|+|++ .+++||+.+..- +..-.+|...|.+.+|+|..
T Consensus 95 fD~k~r~iLR~~~ah-~apv~~~~f~~~d~t~l~s~sDd~-------v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~ 165 (487)
T KOG0310|consen 95 FDMKSRVILRQLYAH-QAPVHVTKFSPQDNTMLVSGSDDK-------VVKYWDLSTAYV-QAELSGHTDYVRCGDISPAN 165 (487)
T ss_pred eccccHHHHHHHhhc-cCceeEEEecccCCeEEEecCCCc-------eEEEEEcCCcEE-EEEecCCcceeEeeccccCC
Confidence 444444456666666 899999999999988888888874 899999998764 43334556999999999974
Q ss_pred ---ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++-|+.||+||+++- ..+.++. |..||-++++-|.|++|++|+ .+.|++||+-.
T Consensus 166 ~hivvtGsYDg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~ 226 (487)
T KOG0310|consen 166 DHIVVTGSYDGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIASAG-GNSVKVWDLTT 226 (487)
T ss_pred CeEEEecCCCceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEEcC-CCeEEEEEecC
Confidence 44 467999999999975 5555554 589999999999999999988 78899999864
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.2e-12 Score=126.71 Aligned_cols=118 Identities=17% Similarity=0.250 Sum_probs=102.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
++.|+.. ++.|-++.|+|..-+++++=-+ |.|+|||-|-+..+..++ .|++||+.|.|||++ |+++|
T Consensus 2 ltkfEsk-SsRvKglsFHP~rPwILtslHs--------G~IQlWDYRM~tli~rFd-eHdGpVRgv~FH~~qplFVSGGD 71 (1202)
T KOG0292|consen 2 LTKFESK-SSRVKGLSFHPKRPWILTSLHS--------GVIQLWDYRMGTLIDRFD-EHDGPVRGVDFHPTQPLFVSGGD 71 (1202)
T ss_pred cchhhcc-cccccceecCCCCCEEEEeecC--------ceeeeehhhhhhHHhhhh-ccCCccceeeecCCCCeEEecCC
Confidence 4456665 6789999999988877776555 489999999998877764 445999999999998 66679
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|..||+|+.++.+++-++.+ |-.-|+.+.|++.=..|++||+|.+|++|.-
T Consensus 72 DykIkVWnYk~rrclftL~G-HlDYVRt~~FHheyPWIlSASDDQTIrIWNw 122 (1202)
T KOG0292|consen 72 DYKIKVWNYKTRRCLFTLLG-HLDYVRTVFFHHEYPWILSASDDQTIRIWNW 122 (1202)
T ss_pred ccEEEEEecccceehhhhcc-ccceeEEeeccCCCceEEEccCCCeEEEEec
Confidence 99999999999999999999 6999999999999999999999999999973
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.4e-11 Score=112.02 Aligned_cols=125 Identities=13% Similarity=0.193 Sum_probs=101.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~ 83 (248)
-|..+|.++.++.+. ...+++.+.|.+.+++++|+|. .++|||-|++. .+...--+|...|.+|.++|
T Consensus 286 WDletg~~~~~~~~~--ksl~~i~~~~~~~Ll~~gssdr--------~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp 355 (423)
T KOG0313|consen 286 WDLETGGLKSTLTTN--KSLNCISYSPLSKLLASGSSDR--------HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSP 355 (423)
T ss_pred EEeecccceeeeecC--cceeEeecccccceeeecCCCC--------ceeecCCCCCCCceeEEeeecchhhhhheecCC
Confidence 456678888888875 6889999999887777877776 89999999873 22222234447999999999
Q ss_pred Cc---ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 84 NY---VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 84 d~---l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.. ++ .+.|+++|+||.++-+ ++..|.+ |...|-++.|+ ++++|++|+.|.+|+++--
T Consensus 356 ~~~~~~~S~S~D~t~klWDvRS~k~plydI~~-h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 356 TNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG-HNDKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred CCceEEEEEecCCeEEEEEeccCCCcceeecc-CCceEEEEecc-CCceEEeccCcceEEEecc
Confidence 86 44 4689999999999988 9999998 68999998885 6778999999999999853
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-11 Score=122.15 Aligned_cols=129 Identities=10% Similarity=0.165 Sum_probs=111.4
Q ss_pred cchhcCceeEEEe--cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIE--SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~--~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
+|+++|.--.++. ..|.+.|++++...-+..++++|.++ .++.||.....++....-+ .+++.+..|.
T Consensus 475 fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~G--------ilkfw~f~~k~l~~~l~l~--~~~~~iv~hr 544 (910)
T KOG1539|consen 475 FNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADG--------ILKFWDFKKKVLKKSLRLG--SSITGIVYHR 544 (910)
T ss_pred EEcccCeeecccccCccccCceeEEEecCCCceEEEccCcc--------eEEEEecCCcceeeeeccC--CCcceeeeee
Confidence 7888998888884 33478999999887777788888875 8999999988776665544 7899999987
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.. ++.+||-.|++.|..|.+.+..+.+ |...||+++|+|||..|++|+.|++|++||+|.-
T Consensus 545 ~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g-h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 545 VSDLLAIALDDFSIRVVDVVTRKVVREFWG-HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred hhhhhhhhcCceeEEEEEchhhhhhHHhhc-cccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 75 5567999999999999999999998 7999999999999999999999999999999974
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.7e-12 Score=116.69 Aligned_cols=153 Identities=12% Similarity=0.282 Sum_probs=116.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee-eeCCCeEEEEECC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL-SMDSSVVKIWSKD 100 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~-Ssdd~~IKIWD~~ 100 (248)
-+.||.+.|.+ .++++|++|. ||++||+.++..+.+. |+|...|-++.+....|+ +|.|.+|+|||++
T Consensus 320 rAaVNvVdfd~--kyIVsASgDR--------TikvW~~st~efvRtl-~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~ 388 (499)
T KOG0281|consen 320 RAAVNVVDFDD--KYIVSASGDR--------TIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 388 (499)
T ss_pred hhheeeecccc--ceEEEecCCc--------eEEEEeccceeeehhh-hcccccceehhccCeEEEecCCCceEEEEecc
Confidence 56777776654 4888888886 9999999998877665 566688999998877644 5689999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC-CCC---CCCccccccchhhhhhccccccccCCcee
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS-LGP---APKWCGFLDNLTEELEENIIENVYDDYKF 176 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~-lG~---aP~wcs~ld~~tee~e~~~~~~~yd~y~f 176 (248)
.|+++..+++ |+.-|+++.| |...|++|.-||+|++|++.+ |-| +..-| |-.+.|.-.- --.--||++.-
T Consensus 389 ~G~cLRvLeG-HEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~C--l~~lv~hsgR-VFrLQFD~fqI 462 (499)
T KOG0281|consen 389 CGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC--LRTLVEHSGR-VFRLQFDEFQI 462 (499)
T ss_pred ccHHHHHHhc-hHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchH--HHhhhhccce-eEEEeecceEE
Confidence 9999999999 6999998888 677899999999999999754 222 22224 4444441110 11234999999
Q ss_pred ecHhHHhhcCCcccc
Q psy2083 177 VTRQELEDLGLGHLI 191 (248)
Q Consensus 177 vt~~~l~~l~~~~li 191 (248)
|+..-..++-+|+..
T Consensus 463 vsssHddtILiWdFl 477 (499)
T KOG0281|consen 463 ISSSHDDTILIWDFL 477 (499)
T ss_pred EeccCCCeEEEEEcC
Confidence 999988888888743
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.6e-12 Score=115.81 Aligned_cols=126 Identities=12% Similarity=0.187 Sum_probs=109.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
-|+++|.|++++.+| +..|..+.|.+++.+|+++|.|. .+++||+|+-+.+.++ .|. ..|+++.|||-
T Consensus 249 WDprSg~cl~tlh~H-KntVl~~~f~~n~N~Llt~skD~--------~~kv~DiR~mkEl~~~r~Hk--kdv~~~~WhP~ 317 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGH-KNTVLAVKFNPNGNWLLTGSKDQ--------SCKVFDIRTMKELFTYRGHK--KDVTSLTWHPL 317 (464)
T ss_pred ecCCCcchhhhhhhc-cceEEEEEEcCCCCeeEEccCCc--------eEEEEehhHhHHHHHhhcch--hhheeeccccc
Confidence 478999999998887 89999999999888898988886 8999999977766654 455 88999999986
Q ss_pred c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 85 Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 85 ~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. ++ ++.|+.|..|....-+++..++..|...|.+++++|=|.+|++|+.|.+++.|-=
T Consensus 318 ~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 318 NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 4 33 3579999999998778888888767899999999999999999999999999963
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=6e-11 Score=110.04 Aligned_cols=114 Identities=11% Similarity=0.222 Sum_probs=93.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc---ee-
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY---VL- 87 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~---l~- 87 (248)
.+|.+.|-++.|.|-+...+++|+++. +|++|+|=.+ .|+... .+|...|.-|+|||.. ++
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~-------~v~vW~IPe~~l~~~ltepvv~L-~gH~rrVg~V~wHPtA~NVLls 149 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDT-------KVMVWQIPENGLTRDLTEPVVEL-YGHQRRVGLVQWHPTAPNVLLS 149 (472)
T ss_pred cCccccccccccCccCCceeecCCCCc-------eEEEEECCCcccccCcccceEEE-eecceeEEEEeecccchhhHhh
Confidence 345899999999997777666656553 9999998654 344443 2334889999999985 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++.|.+|+|||..||+.+-++. |+.-|.+++|+-||++|++++.|++|++|+.
T Consensus 150 ag~Dn~v~iWnv~tgeali~l~--hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp 202 (472)
T KOG0303|consen 150 AGSDNTVSIWNVGTGEALITLD--HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP 202 (472)
T ss_pred ccCCceEEEEeccCCceeeecC--CCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence 4579999999999999998887 5999999999999999999999999999984
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=105.47 Aligned_cols=120 Identities=12% Similarity=0.174 Sum_probs=102.8
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD- 90 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd- 90 (248)
+.+|..| .+.|.++...|+..+.+++|+|+ .--|||+.++..+... .+|+..|+++.|+.++ |+++|
T Consensus 57 ~~tF~~H-~~svFavsl~P~~~l~aTGGgDD--------~AflW~~~~ge~~~el-tgHKDSVt~~~FshdgtlLATGdm 126 (399)
T KOG0296|consen 57 LVTFDKH-TDSVFAVSLHPNNNLVATGGGDD--------LAFLWDISTGEFAGEL-TGHKDSVTCCSFSHDGTLLATGDM 126 (399)
T ss_pred eeehhhc-CCceEEEEeCCCCceEEecCCCc--------eEEEEEccCCcceeEe-cCCCCceEEEEEccCceEEEecCC
Confidence 4566665 79999999999887788999998 6899999998744443 2455899999999998 67775
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+||+..+|.....+.. .-..|-.++++|-+..|++|++|+.+..|-||.
T Consensus 127 sG~v~v~~~stg~~~~~~~~-e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~ 179 (399)
T KOG0296|consen 127 SGKVLVFKVSTGGEQWKLDQ-EVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS 179 (399)
T ss_pred CccEEEEEcccCceEEEeec-ccCceEEEEecccccEEEeecCCCcEEEEECCC
Confidence 99999999999999999863 157999999999999999999999999999998
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.22 E-value=5e-10 Score=97.51 Aligned_cols=125 Identities=7% Similarity=0.118 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..++.+ ..+..++++|++..+++++.++ +.|++||+++++.+...... ..+..+.|+|++
T Consensus 16 ~d~~t~~~~~~~~~~--~~~~~l~~~~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g 84 (300)
T TIGR03866 16 IDTATLEVTRTFPVG--QRPRGITLSKDGKLLYVCASDS-------DTIQVIDLATGEVIGTLPSG--PDPELFALHPNG 84 (300)
T ss_pred EECCCCceEEEEECC--CCCCceEECCCCCEEEEEECCC-------CeEEEEECCCCcEEEeccCC--CCccEEEECCCC
Confidence 466788888888865 4577899999887776555443 48999999998776654332 235688999987
Q ss_pred --e-ee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC-eEEEEEcC
Q psy2083 86 --V-LS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-KILTYYIP 143 (248)
Q Consensus 86 --l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~-~I~~w~Ip 143 (248)
+ ++ ++++.|++||.++++.+..++. ...+++++|+|||.++++++.++ .+..|+..
T Consensus 85 ~~l~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~ 145 (300)
T TIGR03866 85 KILYIANEDDNLVTVIDIETRKVLAEIPV--GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK 145 (300)
T ss_pred CEEEEEcCCCCeEEEEECCCCeEEeEeeC--CCCcceEEECCCCCEEEEEecCCCeEEEEeCC
Confidence 3 33 4688999999999998888875 45678999999999999998875 45566653
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.7e-11 Score=113.15 Aligned_cols=119 Identities=11% Similarity=0.275 Sum_probs=89.1
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEE---e-cCCCCCCeeEEEEcCCc--ee-eeCC
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRV---K-DHMYGLPIRDIKFHDNY--VL-SMDS 91 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~---~-~h~~~~pI~sI~F~~d~--l~-Ssdd 91 (248)
+|...+++.||.|++...|..++++ |++||||+...+. +.+ + ..+-.-|+++++|++++ |+ ++.|
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~D-------gtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYD-------GTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD 338 (641)
T ss_pred CceeeeeccccccCcccceEEecCC-------CcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC
Confidence 3478899999999988866555554 5999999987632 322 2 22333589999999998 44 4689
Q ss_pred CeEEEEECCCCC--EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 SVVKIWSKDNGS--LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 ~~IKIWD~~tGk--~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|.|||..+.. +...+...|.. .|+|+.|++||+.|++=+.|.++++|++.+.
T Consensus 339 GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 339 GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc
Confidence 999999975422 22223221444 9999999999999999999999999998765
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=9e-11 Score=112.82 Aligned_cols=152 Identities=14% Similarity=0.214 Sum_probs=120.9
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCe
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSV 93 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~ 93 (248)
+|...|-.+.+.+|+..++++|.|+ .|.|||.++..|+..+. .|...|+.++|+|-. |+++ .|++
T Consensus 299 ~H~qeVCgLkws~d~~~lASGgnDN--------~~~Iwd~~~~~p~~~~~-~H~aAVKA~awcP~q~~lLAsGGGs~D~~ 369 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDGNQLASGGNDN--------VVFIWDGLSPEPKFTFT-EHTAAVKALAWCPWQSGLLATGGGSADRC 369 (484)
T ss_pred cccceeeeeEECCCCCeeccCCCcc--------ceEeccCCCccccEEEe-ccceeeeEeeeCCCccCceEEcCCCcccE
Confidence 3478999999999888888888887 89999999888877652 334899999999975 5543 5999
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCCCCCccccccchhhhhhccccc---
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN--ENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIE--- 168 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~--ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~--- 168 (248)
||+||..+|+.+.++.. .+.|.+|.|+|..+.|+++- .+..|.+|..|++-+. .+|--|...
T Consensus 370 i~fwn~~~g~~i~~vdt--gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~-----------~~l~gH~~RVl~ 436 (484)
T KOG0305|consen 370 IKFWNTNTGARIDSVDT--GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLV-----------AELLGHTSRVLY 436 (484)
T ss_pred EEEEEcCCCcEeccccc--CCceeeEEEcCCCCEEEEecCCCCCcEEEEecccccee-----------eeecCCcceeEE
Confidence 99999999999999998 79999999999998888775 3568999999884333 333333322
Q ss_pred --cccCCceeecHhHHhhcCCccccCC
Q psy2083 169 --NVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 169 --~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
.--|+-..+|-.-.|.|.+|++-+.
T Consensus 437 la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 437 LALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEECCCCCEEEEecccCcEEeccccCC
Confidence 2246788889999999999988774
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-11 Score=107.82 Aligned_cols=114 Identities=11% Similarity=0.259 Sum_probs=95.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc---eeeeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY---VLSMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIW 97 (248)
..|.++.|.|.| -.+.+|.+. .+++|||+.+-+++.. .+.+|...|++|.+++.+ +.+|-|+.||||
T Consensus 217 ~~vrsiSfHPsG-efllvgTdH-------p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 217 EPVRSISFHPSG-EFLLVGTDH-------PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLW 288 (430)
T ss_pred ceeeeEeecCCC-ceEEEecCC-------CceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEee
Confidence 378888888854 445555555 3999999999877654 467788999999999997 666789999999
Q ss_pred ECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|--+++++.+|.. |..+.|.+..|..||.+|++.+.|..+++|.|..
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 9999999999974 3357999999999999999999999999999854
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.7e-11 Score=110.30 Aligned_cols=126 Identities=12% Similarity=0.279 Sum_probs=105.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~ 85 (248)
+..+|.|++-|+..|+..|+++.|+.|+..+++++.|. +||+.-+.+|+.+..+ +| ...|+.+.|.+++
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~--------tvRiHGlKSGK~LKEfrGH--sSyvn~a~ft~dG 360 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ--------TVRIHGLKSGKCLKEFRGH--SSYVNEATFTDDG 360 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccc--------eEEEeccccchhHHHhcCc--cccccceEEcCCC
Confidence 45678899999977789999999999999898988886 9999999999988764 45 4899999999998
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
|+ ++.|++||+|+.++++++.++.+. ...+||++-..|.+ .-+++++..++|.+-.+
T Consensus 361 ~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~ 422 (508)
T KOG0275|consen 361 HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM 422 (508)
T ss_pred CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec
Confidence 55 468999999999999999999862 24689999998855 56777777788776654
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=106.17 Aligned_cols=130 Identities=12% Similarity=0.201 Sum_probs=94.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCC-CCc-EEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPE-SGM-MFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~-~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F 81 (248)
+|..+|+.+..|.++ ++.+|.+.|.++ +.. +.++++| |+||+||+|+... ........+.|-.++.-
T Consensus 55 yd~~tg~~l~~fk~~-~~~~N~vrf~~~ds~h~v~s~ssD--------G~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~ 125 (376)
T KOG1188|consen 55 YDKGTGQLLEEFKGP-PATTNGVRFISCDSPHGVISCSSD--------GTVRLWDIRSQAESARISWTQQSGTPFICLDL 125 (376)
T ss_pred EeccchhhhheecCC-CCcccceEEecCCCCCeeEEeccC--------CeEEEEEeecchhhhheeccCCCCCcceEeec
Confidence 567788888888887 789999999875 444 4455555 5999999999743 33333332456666666
Q ss_pred cCCc-ee-ee-----CCCeEEEEECCCCCE-EEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY-VL-SM-----DSSVVKIWSKDNGSL-FTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~-l~-Ss-----dd~~IKIWD~~tGk~-~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
.-.. ++ ++ ++-.|-+||.++.+. +..+...|..+|++++|+|+. .+|++|+-||-|.+|++..
T Consensus 126 nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 126 NCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred cCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 5333 33 22 466888999998665 666654479999999999954 9999999999999999743
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-09 Score=95.41 Aligned_cols=126 Identities=10% Similarity=0.160 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+....+..+ ..+..++++|++..+++++.++ +.|++||+++++++....++ ..+.+++|+|++
T Consensus 58 ~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~-------~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg 126 (300)
T TIGR03866 58 IDLATGEVIGTLPSG--PDPELFALHPNGKILYIANEDD-------NLVTVIDIETRKVLAEIPVG--VEPEGMAVSPDG 126 (300)
T ss_pred EECCCCcEEEeccCC--CCccEEEECCCCCEEEEEcCCC-------CeEEEEECCCCeEEeEeeCC--CCcceEEECCCC
Confidence 566677777776654 3456788888877777666543 48999999998877666543 457899999998
Q ss_pred --ee-eeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 86 --VL-SMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
++ ++. ...+.+||.++++.+..+.. ...+++++|+|||..|++++ .++.|.+|++..
T Consensus 127 ~~l~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~ 188 (300)
T TIGR03866 127 KIVVNTSETTNMAHFIDTKTYEIVDNVLV--DQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT 188 (300)
T ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEEc--CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc
Confidence 33 343 35688899999988777655 45668899999999886665 589999999865
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.6e-11 Score=118.94 Aligned_cols=118 Identities=13% Similarity=0.194 Sum_probs=98.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~ 92 (248)
++.+| .+.|-++.|..+..++.+++.+ |+||+|||...+-+.+.. +|..++.+|.|||-+ .+ ++.|.
T Consensus 65 S~~~h-espIeSl~f~~~E~Llaagsas--------gtiK~wDleeAk~vrtLt-gh~~~~~sv~f~P~~~~~a~gStdt 134 (825)
T KOG0267|consen 65 SLTGH-ESPIESLTFDTSERLLAAGSAS--------GTIKVWDLEEAKIVRTLT-GHLLNITSVDFHPYGEFFASGSTDT 134 (825)
T ss_pred eeecc-CCcceeeecCcchhhhcccccC--------Cceeeeehhhhhhhhhhh-ccccCcceeeeccceEEeccccccc
Confidence 34444 7899999998876666555555 499999999988777652 445899999999987 33 46788
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
-++|||.+.-.+..++.+ |...++.+.|+|+|.++++|++|..+++|+.++
T Consensus 135 d~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a 185 (825)
T KOG0267|consen 135 DLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA 185 (825)
T ss_pred cceehhhhccCceeeecC-CcceeEEEeecCCCceeeccCCcceeeeecccc
Confidence 999999998888999998 699999999999999999999999999999854
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.6e-11 Score=110.23 Aligned_cols=169 Identities=8% Similarity=0.167 Sum_probs=125.0
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC----CCc-------------------
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR----ADK------------------- 63 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR----s~~------------------- 63 (248)
...+|+|+.+..+| .+.||++.|++.+.+++++++|. +..||-.. .++
T Consensus 176 s~Esg~CL~~Y~GH-~GSVNsikfh~s~~L~lTaSGD~--------taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~ 246 (481)
T KOG0300|consen 176 SLESGACLATYTGH-TGSVNSIKFHNSGLLLLTASGDE--------TAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEH 246 (481)
T ss_pred eeccccceeeeccc-ccceeeEEeccccceEEEccCCc--------chHHHHHhhcCcCCCCCCCCCCCchhhhhccccc
Confidence 34689999998887 89999999999776677887775 77888611 111
Q ss_pred -----------------eeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 64 -----------------PLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 64 -----------------pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p 123 (248)
|+..+ .+|..+|.+..|...+ |.++-|++-.+||.++|+++..+.+ |..+++.+|-+|
T Consensus 247 ~~d~d~~~~sD~~tiRvPl~~l-tgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG-Hd~ELtHcstHp 324 (481)
T KOG0300|consen 247 NRDTDSSEKSDGHTIRVPLMRL-TGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG-HDSELTHCSTHP 324 (481)
T ss_pred ccccccccccCCceeeeeeeee-eccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccC-cchhccccccCC
Confidence 22222 1334667777776655 5567899999999999999999998 799999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccC-CceeecHhHHhhcCCccccCC
Q psy2083 124 ESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYD-DYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd-~y~fvt~~~l~~l~~~~ligt 193 (248)
...++++++.|.+.++|+...--++ -+-+..=|+ .-...+|. ||+.|+-++...+.+|+|-..
T Consensus 325 tQrLVvTsSrDtTFRLWDFReaI~s---V~VFQGHtd----tVTS~vF~~dd~vVSgSDDrTvKvWdLrNM 388 (481)
T KOG0300|consen 325 TQRLVVTSSRDTTFRLWDFREAIQS---VAVFQGHTD----TVTSVVFNTDDRVVSGSDDRTVKVWDLRNM 388 (481)
T ss_pred cceEEEEeccCceeEeccchhhcce---eeeeccccc----ceeEEEEecCCceeecCCCceEEEeeeccc
Confidence 9999999999999999986532222 122222222 11234444 999999999999999998764
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=9e-10 Score=94.37 Aligned_cols=116 Identities=11% Similarity=0.206 Sum_probs=85.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM- 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss- 89 (248)
...++-...+.|.+++++|++..+++..+.. .+.|.|||++ ++++..... .+++.|.|+|++ ++ ++
T Consensus 51 ~~~i~l~~~~~I~~~~WsP~g~~favi~g~~------~~~v~lyd~~-~~~i~~~~~---~~~n~i~wsP~G~~l~~~g~ 120 (194)
T PF08662_consen 51 VESIELKKEGPIHDVAWSPNGNEFAVIYGSM------PAKVTLYDVK-GKKIFSFGT---QPRNTISWSPDGRFLVLAGF 120 (194)
T ss_pred cceeeccCCCceEEEEECcCCCEEEEEEccC------CcccEEEcCc-ccEeEeecC---CCceEEEECCCCCEEEEEEc
Confidence 3444432235699999999877765443321 2489999997 666666542 578999999998 33 33
Q ss_pred --CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC------CCeEEEEEc
Q psy2083 90 --DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE------NKKILTYYI 142 (248)
Q Consensus 90 --dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e------d~~I~~w~I 142 (248)
..+.|.+||.++.+.+.+.+. ..+++++|+|||.+|+++.. |..+++|..
T Consensus 121 ~n~~G~l~~wd~~~~~~i~~~~~---~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 121 GNLNGDLEFWDVRKKKKISTFEH---SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred cCCCcEEEEEECCCCEEeecccc---CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence 146799999999999888764 45789999999999999975 566788865
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=108.21 Aligned_cols=116 Identities=12% Similarity=0.165 Sum_probs=96.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
+..| .+.|+-+.|+++|.+|++|+.|. +.-+|++-...-+ .+. -+|..||.-|.|+||. ++++.
T Consensus 220 l~~h-tdEVWfl~FS~nGkyLAsaSkD~--------Taiiw~v~~d~~~kl~~tl-vgh~~~V~yi~wSPDdryLlaCg~ 289 (519)
T KOG0293|consen 220 LQDH-TDEVWFLQFSHNGKYLASASKDS--------TAIIWIVVYDVHFKLKKTL-VGHSQPVSYIMWSPDDRYLLACGF 289 (519)
T ss_pred HhhC-CCcEEEEEEcCCCeeEeeccCCc--------eEEEEEEecCcceeeeeee-ecccCceEEEEECCCCCeEEecCc
Confidence 3444 78999999999988899998887 8999998765332 222 2444899999999997 55567
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+..+++||..+|..++.+..++...+.|+||.|||.-+++|+.|++|..|+.
T Consensus 290 ~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl 341 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL 341 (519)
T ss_pred hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence 8889999999999999988645578999999999999999999999999975
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.1e-10 Score=100.55 Aligned_cols=111 Identities=13% Similarity=0.235 Sum_probs=95.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeC--CCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMD--SSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssd--d~~IK 95 (248)
.+.|+++.|+++|..+++++.|+ +++|||..+++.+.+. .+. ..|..++|.... +.|+. |.+||
T Consensus 14 ~~~i~sl~fs~~G~~litss~dD--------sl~LYd~~~g~~~~ti~skk--yG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDD--------SLRLYDSLSGKQVKTINSKK--YGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCC--------eEEEEEcCCCceeeEeeccc--ccccEEEEecCCceEEEccCCCCCceE
Confidence 46899999999888788888887 8999999999988775 333 457888886553 55554 88999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.-++.+.+.+..+.+ |...||+++.+|-+..+++++.|++|+.||+.
T Consensus 84 yLsl~dNkylRYF~G-H~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR 130 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPG-HKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLR 130 (311)
T ss_pred EEEeecCceEEEcCC-CCceEEEEEecCCCCeEEecccCCeEEeeEec
Confidence 999999999999998 79999999999999999999999999999986
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.2e-10 Score=108.91 Aligned_cols=119 Identities=13% Similarity=0.220 Sum_probs=96.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE-EcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK-FHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~-F~~d~--l 86 (248)
.|+.+.+|.+| .+.|..+++-|+++ +++++.|+ .|++||+ ++..+... |+|..-|.++. +++++ +
T Consensus 168 ~~~~l~tf~gH-tD~VRgL~vl~~~~-flScsNDg--------~Ir~w~~-~ge~l~~~-~ghtn~vYsis~~~~~~~Iv 235 (745)
T KOG0301|consen 168 GGTLLKTFSGH-TDCVRGLAVLDDSH-FLSCSNDG--------SIRLWDL-DGEVLLEM-HGHTNFVYSISMALSDGLIV 235 (745)
T ss_pred CCchhhhhccc-hhheeeeEEecCCC-eEeecCCc--------eEEEEec-cCceeeee-eccceEEEEEEecCCCCeEE
Confidence 37888998886 89999999999655 66777774 8999999 66666554 56668999999 66666 4
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|+++|||+.. .+.+.|+- -...|.++++-+||. |++|+.||.|++|-...
T Consensus 236 s~gEDrtlriW~~~--e~~q~I~l-PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 236 STGEDRTLRIWKKD--ECVQVITL-PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred EecCCceEEEeecC--ceEEEEec-CccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 45689999999987 89999985 135999999999987 56788899999998764
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-10 Score=114.59 Aligned_cols=124 Identities=14% Similarity=0.202 Sum_probs=95.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
|.++.+-..++.+. +..|.+|.|+|..+..|+++.|+ |.+++||||.+ ++...+ .|. +||.++.|||+
T Consensus 162 DlR~~~S~~t~~~n-SESiRDV~fsp~~~~~F~s~~ds-------G~lqlWDlRqp~r~~~k~~AH~--GpV~c~nwhPn 231 (839)
T KOG0269|consen 162 DLRSKKSKSTFRSN-SESIRDVKFSPGYGNKFASIHDS-------GYLQLWDLRQPDRCEKKLTAHN--GPVLCLNWHPN 231 (839)
T ss_pred eeeccccccccccc-chhhhceeeccCCCceEEEecCC-------ceEEEeeccCchhHHHHhhccc--CceEEEeecCC
Confidence 44444434444342 57899999999889999988887 69999999997 444433 454 99999999998
Q ss_pred c--eee-eCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCC-CEEEEEe--CCCeEEEEEc
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPES-GMMFIAN--ENKKILTYYI 142 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pds-gll~sa~--ed~~I~~w~I 142 (248)
. |++ +-|++|||||..+++ ...+++. .++++.|.|-|+- ..|++++ .|..|++|+|
T Consensus 232 r~~lATGGRDK~vkiWd~t~~~~~~~~tInT--iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDv 295 (839)
T KOG0269|consen 232 REWLATGGRDKMVKIWDMTDSRAKPKHTINT--IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDV 295 (839)
T ss_pred CceeeecCCCccEEEEeccCCCccceeEEee--cceeeeeeeccCccchhhhhhccccceEEEEee
Confidence 7 665 479999999998754 6678887 7999999999966 4455554 5789999986
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.9e-10 Score=101.73 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=93.8
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
++.|.++.|+|.++.|++++-|+ +++|||+-+......+.|+ .||.+++|.++. ++++-|+.||..|.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDg--------slrlYdv~~~~l~~~~~~~--~plL~c~F~d~~~~~~G~~dg~vr~~Dl 82 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDG--------SLRLYDVPANSLKLKFKHG--APLLDCAFADESTIVTGGLDGQVRRYDL 82 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccC--------cEEEEeccchhhhhheecC--CceeeeeccCCceEEEeccCceEEEEEe
Confidence 57899999999888888888774 9999999988655556665 999999999976 55567999999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+.. .+.. |..+|++++.++..+.+++|+-|++|++|+..
T Consensus 83 n~~~~~-~igt-h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 83 NTGNED-QIGT-HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred cCCcce-eecc-CCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 988754 3444 58999999999999999999999999999854
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.7e-10 Score=107.63 Aligned_cols=173 Identities=16% Similarity=0.268 Sum_probs=131.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++..++.+| ...|.-+.|+||+.+++++|.+. .+.|||+.++.....+.++++..+.+++|.||+ |++
T Consensus 260 kl~~tlvgh-~~~V~yi~wSPDdryLlaCg~~e--------~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~G 330 (519)
T KOG0293|consen 260 KLKKTLVGH-SQPVSYIMWSPDDRYLLACGFDE--------VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTG 330 (519)
T ss_pred eeeeeeecc-cCceEEEEECCCCCeEEecCchH--------heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEec
Confidence 456677777 68899999999999999999987 699999999988888877778899999999998 667
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc-hhhhhhcccc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN-LTEELEENII 167 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~-~tee~e~~~~ 167 (248)
+.|++|-.||.+ |+.+.++++-....|.++++.+||..+++.+.|++|.+|...+ .+|. +.+| |++.
T Consensus 331 s~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~---------~~dr~lise--~~~i 398 (519)
T KOG0293|consen 331 SPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREA---------RVDRGLISE--EQPI 398 (519)
T ss_pred CCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhh---------hhhhccccc--cCce
Confidence 789999999988 8888888872234689999999999999999999999997543 2232 3332 2222
Q ss_pred --ccccCCc-eeecHhHHhhcCCccccCCCcccccce---eeee
Q psy2083 168 --ENVYDDY-KFVTRQELEDLGLGHLIGTSLLRAYMH---GFFM 205 (248)
Q Consensus 168 --~~~yd~y-~fvt~~~l~~l~~~~ligt~~l~~ymh---gyf~ 205 (248)
-++=.|- -+++.=+-+++-||.|----++|-||= |.|+
T Consensus 399 ts~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fi 442 (519)
T KOG0293|consen 399 TSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFI 442 (519)
T ss_pred eEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceE
Confidence 2333333 345555666677777666566777774 6664
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.8e-10 Score=100.61 Aligned_cols=109 Identities=13% Similarity=0.265 Sum_probs=90.7
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee-eCCCeE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS-MDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S-sdd~~I 94 (248)
.|.+.|-++||+.|+..+|+++.|+ .+++|||.++++..+-.|. .||+.+.|-+.. |++ |-|++|
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk--------~~k~wDL~S~Q~~~v~~Hd--~pvkt~~wv~~~~~~cl~TGSWDKTl 139 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDK--------QAKLWDLASGQVSQVAAHD--APVKTCHWVPGMNYQCLVTGSWDKTL 139 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCC--------ceEEEEccCCCeeeeeecc--cceeEEEEecCCCcceeEecccccce
Confidence 3468999999999988888888886 8999999999888877776 999999998764 444 679999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|.||.+..+++.+++- +..+-++.+ --.++++|..++.|.+|.+
T Consensus 140 KfWD~R~~~pv~t~~L--PeRvYa~Dv--~~pm~vVata~r~i~vynL 183 (347)
T KOG0647|consen 140 KFWDTRSSNPVATLQL--PERVYAADV--LYPMAVVATAERHIAVYNL 183 (347)
T ss_pred eecccCCCCeeeeeec--cceeeehhc--cCceeEEEecCCcEEEEEc
Confidence 9999999999999996 555543332 3468999999999999974
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-10 Score=111.23 Aligned_cols=122 Identities=9% Similarity=0.147 Sum_probs=96.3
Q ss_pred eeEEEecCCCCCeeEEEE-eCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eE--------EecCCCCCCeeEEEE
Q psy2083 13 LFTCIESGDQTQFNNLCH-IPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LR--------VKDHMYGLPIRDIKF 81 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~-~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~--------~~~h~~~~pI~sI~F 81 (248)
|..++..| .+.|.++++ .+++-..++||-|. .|.|||+.++.. +. ....++..+|.+++-
T Consensus 109 c~stir~H-~DYVkcla~~ak~~~lvaSgGLD~--------~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~ 179 (735)
T KOG0308|consen 109 CMSTIRTH-KDYVKCLAYIAKNNELVASGGLDR--------KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM 179 (735)
T ss_pred hHhhhhcc-cchheeeeecccCceeEEecCCCc--------cEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence 55566665 789999998 55554444555554 899999998722 21 122255678999999
Q ss_pred cCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.+ ++++ -.+.+++||.++++-+..+.+ |...|+.+-.++||..+++|+.|++|++|++-+
T Consensus 180 N~t~t~ivsGgtek~lr~wDprt~~kimkLrG-HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 180 NQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRG-HTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred CCcceEEEecCcccceEEeccccccceeeeec-cccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 9987 5554 588999999999999999998 799999999999999999999999999999643
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=7e-11 Score=108.63 Aligned_cols=126 Identities=17% Similarity=0.306 Sum_probs=97.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEE-ecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRV-KDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~-~~h~~~~pI~sI~F~~ 83 (248)
+|++++.+++.+--. -.-|++||.| .+..|++++++ ..+.+||+|. .+|+.+ ++|. ..|.+|.|+|
T Consensus 215 yD~R~~~Pl~KVi~~--mRTN~IswnP-eafnF~~a~ED-------~nlY~~DmR~l~~p~~v~~dhv--sAV~dVdfsp 282 (433)
T KOG0268|consen 215 YDLRQASPLKKVILT--MRTNTICWNP-EAFNFVAANED-------HNLYTYDMRNLSRPLNVHKDHV--SAVMDVDFSP 282 (433)
T ss_pred EecccCCccceeeee--ccccceecCc-cccceeecccc-------ccceehhhhhhcccchhhcccc--eeEEEeccCC
Confidence 567777777765432 3458999999 66766665554 2899999998 478887 4666 8999999999
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.+ +++|-|++|||+..+.|.--..+.......|.+|.++-|+.+|++||+|+.|++|-..
T Consensus 283 tG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 283 TGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred CcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 98 5567899999999997754333332123578899999999999999999999999743
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.8e-10 Score=103.30 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=103.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCc--ee-EEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADK--PL-RVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~--pl-~~~~h~~~~pI~sI~F 81 (248)
-|..+|++.+++.+| .+.|.++.|+|.....+ +++-| |+|.|+|.|.+. +. +..+ ..|-.|+|
T Consensus 271 WD~~~g~p~~s~~~~-~k~Vq~l~wh~~~p~~LLsGs~D--------~~V~l~D~R~~~~s~~~wk~~----g~VEkv~w 337 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHH-GKKVQTLEWHPYEPSVLLSGSYD--------GTVALKDCRDPSNSGKEWKFD----GEVEKVAW 337 (463)
T ss_pred EEcCCCCcceehhhc-CCceeEEEecCCCceEEEecccc--------ceEEeeeccCccccCceEEec----cceEEEEe
Confidence 477889999999965 79999999999776644 44444 499999999532 22 2222 57999999
Q ss_pred cCCc----eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCC
Q psy2083 82 HDNY----VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 82 ~~d~----l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG 146 (248)
+|.. +++.|||+|+-+|+++ |+++-++.. |..+|.++|+++.- +++.+++.|+.|++|.++.-.
T Consensus 338 ~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A-Hd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 338 DPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA-HDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred cCCCceeEEEecCCceEEeeecCCCCCceeEEEe-ccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence 9875 7778999999999997 699999999 69999999998855 899999999999999987533
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.3e-10 Score=110.75 Aligned_cols=118 Identities=11% Similarity=0.247 Sum_probs=97.8
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
|++.-+.++| +..|+.++++|++ .+++||.|. +||||.- ++.+.++. +|..-|+.+++.++. +.+
T Consensus 130 ~~l~~~l~gH-~asVWAv~~l~e~-~~vTgsaDK--------tIklWk~--~~~l~tf~-gHtD~VRgL~vl~~~~flSc 196 (745)
T KOG0301|consen 130 GELVYSLQGH-TASVWAVASLPEN-TYVTGSADK--------TIKLWKG--GTLLKTFS-GHTDCVRGLAVLDDSHFLSC 196 (745)
T ss_pred hhhhcccCCc-chheeeeeecCCC-cEEeccCcc--------eeeeccC--Cchhhhhc-cchhheeeeEEecCCCeEee
Confidence 3444445665 8999999999976 677888886 9999986 45565542 344899999999995 556
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+.||+||. +|+++-...+ |.+-|-++...++++.|++++||+++++|..-
T Consensus 197 sNDg~Ir~w~~-~ge~l~~~~g-htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 197 SNDGSIRLWDL-DGEVLLEMHG-HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred cCCceEEEEec-cCceeeeeec-cceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 78999999999 6999999998 69999999999999999999999999999854
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-09 Score=104.36 Aligned_cols=127 Identities=10% Similarity=0.195 Sum_probs=105.6
Q ss_pred ceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
.+...+..| .+.|-.++|.| ..|+|++||+. .|++|++||..+++.+...+.+ .-|.+|.|++.. +++
T Consensus 334 ~p~~~~~~H-~aAVKA~awcP~q~~lLAsGGGs------~D~~i~fwn~~~g~~i~~vdtg--sQVcsL~Wsk~~kEi~s 404 (484)
T KOG0305|consen 334 EPKFTFTEH-TAAVKALAWCPWQSGLLATGGGS------ADRCIKFWNTNTGARIDSVDTG--SQVCSLIWSKKYKELLS 404 (484)
T ss_pred cccEEEecc-ceeeeEeeeCCCccCceEEcCCC------cccEEEEEEcCCCcEecccccC--CceeeEEEcCCCCEEEE
Confidence 455555665 78999999988 45667776665 3789999999999998887766 789999999987 665
Q ss_pred e---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 89 M---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 89 s---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+ .+..|.||+.-+-+.+..+.+ |...|-.++++|||..|++|+.|.+++.|.+-...+.
T Consensus 405 thG~s~n~i~lw~~ps~~~~~~l~g-H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~~ 466 (484)
T KOG0305|consen 405 THGYSENQITLWKYPSMKLVAELLG-HTSRVLYLALSPDGETIVTGAADETLRFWNLFDERPK 466 (484)
T ss_pred ecCCCCCcEEEEeccccceeeeecC-CcceeEEEEECCCCCEEEEecccCcEEeccccCCCCc
Confidence 4 367899999999999999998 7999999999999999999999999999987654333
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-09 Score=99.07 Aligned_cols=111 Identities=14% Similarity=0.235 Sum_probs=88.3
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
..++.+++|.++. .+++++.|+ .|++||+.++.-...-.|. .+|.+|.+.+-. |+++-|++||+||
T Consensus 54 ~~plL~c~F~d~~-~~~~G~~dg--------~vr~~Dln~~~~~~igth~--~~i~ci~~~~~~~~vIsgsWD~~ik~wD 122 (323)
T KOG1036|consen 54 GAPLLDCAFADES-TIVTGGLDG--------QVRRYDLNTGNEDQIGTHD--EGIRCIEYSYEVGCVISGSWDKTIKFWD 122 (323)
T ss_pred CCceeeeeccCCc-eEEEeccCc--------eEEEEEecCCcceeeccCC--CceEEEEeeccCCeEEEcccCccEEEEe
Confidence 4688999988854 466777664 9999999999877776666 999999999643 5556899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
.++-.+.-+++. ...|.++. -.|..|++|+.|.+|.+|+++.+..
T Consensus 123 ~R~~~~~~~~d~--~kkVy~~~--v~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 123 PRNKVVVGTFDQ--GKKVYCMD--VSGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred cccccccccccc--CceEEEEe--ccCCEEEEeecCceEEEEEcccccc
Confidence 997656666665 45777544 5688999999999999999988654
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=104.54 Aligned_cols=124 Identities=12% Similarity=0.226 Sum_probs=98.0
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCc
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~ 85 (248)
++|.-.-.+.+| +..||++.|=|..-+ ++++|+|. +|-+|+ |-|+..+ ...|...|++|.|+||+
T Consensus 135 DSG~SvGei~Gh-Sr~ins~~~KpsRPfRi~T~sdDn--------~v~ffe---GPPFKFk~s~r~HskFV~~VRysPDG 202 (603)
T KOG0318|consen 135 DSGNSVGEITGH-SRRINSVDFKPSRPFRIATGSDDN--------TVAFFE---GPPFKFKSSFREHSKFVNCVRYSPDG 202 (603)
T ss_pred cCCCccceeecc-ceeEeeeeccCCCceEEEeccCCC--------eEEEee---CCCeeeeecccccccceeeEEECCCC
Confidence 355555566665 677777777776656 55555554 899886 6676543 22334789999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEee---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+..+.|+.|-|+|-.+|+.+..|+ + |...|-.+.|+|||..+++++.|.++++|++...
T Consensus 203 ~~Fat~gsDgki~iyDGktge~vg~l~~~~a-HkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~ 267 (603)
T KOG0318|consen 203 SRFATAGSDGKIYIYDGKTGEKVGELEDSDA-HKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN 267 (603)
T ss_pred CeEEEecCCccEEEEcCCCccEEEEecCCCC-ccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence 444689999999999999999999 5 6899999999999999999999999999998764
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.5e-11 Score=116.66 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=104.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|...+++++++-+| ..++.++.|.|-+ ..+++|+.+ +.+++||+|...|..++.- |...|+.+.|+|++
T Consensus 98 DleeAk~vrtLtgh-~~~~~sv~f~P~~-~~~a~gStd-------td~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr 167 (825)
T KOG0267|consen 98 DLEEAKIVRTLTGH-LLNITSVDFHPYG-EFFASGSTD-------TDLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGR 167 (825)
T ss_pred ehhhhhhhhhhhcc-ccCcceeeeccce-EEecccccc-------ccceehhhhccCceeeecC-CcceeEEEeecCCCc
Confidence 34467788887776 7899999988854 444444433 4899999998778777643 44789999999999
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.+ ++|.+|||||...|+....|+. |...++++.|+|..-++.+|+.|++++.|++.
T Consensus 168 ~v~~g~ed~tvki~d~~agk~~~ef~~-~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 168 WVASGGEDNTVKIWDLTAGKLSKEFKS-HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred eeeccCCcceeeeeccccccccccccc-ccccccccccCchhhhhccCCCCceeeeeccc
Confidence 444 5789999999999999999998 69999999999999999999999999999965
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.9e-10 Score=104.82 Aligned_cols=130 Identities=14% Similarity=0.152 Sum_probs=104.2
Q ss_pred cchhcCceeEEEecCCCCCee-EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~-~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
|+..++.--++|... ++.++ -+.|+|....+++..+|+ |+|.|||+....|+...+..|..|...|+|+|.
T Consensus 148 h~~~t~~~tt~f~~~-sgqsvRll~ys~skr~lL~~asd~-------G~VtlwDv~g~sp~~~~~~~HsAP~~gicfsps 219 (673)
T KOG4378|consen 148 HGTKTKQKTTTFTID-SGQSVRLLRYSPSKRFLLSIASDK-------GAVTLWDVQGMSPIFHASEAHSAPCRGICFSPS 219 (673)
T ss_pred EecccCccccceecC-CCCeEEEeecccccceeeEeeccC-------CeEEEEeccCCCcccchhhhccCCcCcceecCC
Confidence 344455555566654 46666 566677666666555554 599999999999998877777799999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
. +++ +.|+.|-|||....+...++.- ..|...|+|.|+|.+|++|+..|+|..||+..+
T Consensus 220 ne~l~vsVG~Dkki~~yD~~s~~s~~~l~y--~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 220 NEALLVSVGYDKKINIYDIRSQASTDRLTY--SHPLSTVAFSECGTYLCAGNSKGELIAYDMRST 282 (673)
T ss_pred ccceEEEecccceEEEeecccccccceeee--cCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence 6 444 5788899999998888888887 789999999999999999999999999999874
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.9e-10 Score=110.54 Aligned_cols=208 Identities=15% Similarity=0.205 Sum_probs=141.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-------eeEEecCC----CCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-------PLRVKDHM----YGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-------pl~~~~h~----~~~ 74 (248)
++..++.++.++..| .+.++++.-.||+...+++|.|. +|++||...-. .+....|. -..
T Consensus 439 fdlaS~~l~Eti~AH-dgaIWsi~~~pD~~g~vT~saDk--------tVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d 509 (888)
T KOG0306|consen 439 FDLASASLVETIRAH-DGAIWSISLSPDNKGFVTGSADK--------TVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED 509 (888)
T ss_pred EEeehhhhhhhhhcc-ccceeeeeecCCCCceEEecCCc--------EEEEEeEEEEeccCcccceeeeeccceEEeccc
Confidence 455566677777766 69999999999998899999997 99999975321 11111121 125
Q ss_pred CeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 75 PIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 75 pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
.|.+|+++||+ ++-+ -|++|||+-.++-+.+-++-+ |.-||.|+.++|||.+|++|+.|++|++|-+- +|.-.|
T Consensus 510 dvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYG-HkLPV~smDIS~DSklivTgSADKnVKiWGLd-FGDCHK- 586 (888)
T KOG0306|consen 510 DVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYG-HKLPVLSMDISPDSKLIVTGSADKNVKIWGLD-FGDCHK- 586 (888)
T ss_pred cEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecc-cccceeEEeccCCcCeEEeccCCCceEEeccc-cchhhh-
Confidence 69999999998 3334 699999999999999999999 79999999999999999999999999999542 232110
Q ss_pred cccc---cchhhhhhccccccccCCceeecHhHHhhcCCc---------cccC-CCcccccce---e-eeech------h
Q psy2083 152 CGFL---DNLTEELEENIIENVYDDYKFVTRQELEDLGLG---------HLIG-TSLLRAYMH---G-FFMDI------R 208 (248)
Q Consensus 152 cs~l---d~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~---------~lig-t~~l~~ymh---g-yf~~~------~ 208 (248)
||. |+++. ...+.+++.|-|-.-.....-| +|=| .+-+++-|- | |.+.. |
T Consensus 587 -S~fAHdDSvm~------V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIR 659 (888)
T KOG0306|consen 587 -SFFAHDDSVMS------VQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIR 659 (888)
T ss_pred -hhhcccCceeE------EEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeE
Confidence 222 44443 4566677778774433333222 2333 223333333 3 55543 4
Q ss_pred hHHHHhhhcCChhhHHHHHHHHHHHHH
Q psy2083 209 LYRKAKSVSAPFEFEEFKKKKIRERIE 235 (248)
Q Consensus 209 ly~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (248)
||.+-+ ++.-+||.|+..-.|..|
T Consensus 660 lwE~td---e~~~lEeekE~ErEe~yE 683 (888)
T KOG0306|consen 660 LWERTD---EILILEEEKEGEREEEYE 683 (888)
T ss_pred eeeccC---cceeeehhhhhhhHHHHH
Confidence 555443 355678877776665555
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-10 Score=111.45 Aligned_cols=146 Identities=10% Similarity=0.220 Sum_probs=111.9
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--Cc----------------eeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--DK----------------PLR 66 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~~----------------pl~ 66 (248)
|.|..--+.+.+...| .+.|+++.|+||+.++++||+|. .|.+|+-.. +. .+.
T Consensus 53 ~~~~~l~k~l~~m~~h-~~sv~CVR~S~dG~~lAsGSDD~--------~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~ 123 (942)
T KOG0973|consen 53 EKNENLPKHLCTMDDH-DGSVNCVRFSPDGSYLASGSDDR--------LVMIWERAEIGSGTVFGSTGGAKNVESWKVVS 123 (942)
T ss_pred hhhcccchhheeeccc-cCceeEEEECCCCCeEeeccCcc--------eEEEeeecccCCcccccccccccccceeeEEE
Confidence 3444445667777776 68898888999877777766664 899999772 11 112
Q ss_pred EecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 67 VKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 67 ~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. -+|...|.+|+|+|+. ++| +-|++|-|||..+++.++.+++ |...|-.+.|.|-|.+|++=++|++|++|.+.
T Consensus 124 ~l-~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~-H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~ 201 (942)
T KOG0973|consen 124 IL-RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG-HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTS 201 (942)
T ss_pred EE-ecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec-ccccccceEECCccCeeeeecCCceEEEEEcc
Confidence 22 2445889999999997 444 5799999999999999999999 79999999999999999999999999999977
Q ss_pred CCCCCCCccccccchhhhhhccccc
Q psy2083 144 SLGPAPKWCGFLDNLTEELEENIIE 168 (248)
Q Consensus 144 ~lG~aP~wcs~ld~~tee~e~~~~~ 168 (248)
..|.. -.||+-.||...+
T Consensus 202 dw~i~-------k~It~pf~~~~~~ 219 (942)
T KOG0973|consen 202 DWGIE-------KSITKPFEESPLT 219 (942)
T ss_pred cceee-------EeeccchhhCCCc
Confidence 64443 3566666665433
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-09 Score=110.57 Aligned_cols=122 Identities=9% Similarity=0.266 Sum_probs=96.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l 86 (248)
+=+++..+.+| .+.|.+++++|++.+++++|-|. +|-|||.++.+.+.+ .+|. ..|+.|.|.|-+ +
T Consensus 118 ~wk~~~~l~~H-~~DV~Dv~Wsp~~~~lvS~s~Dn--------sViiwn~~tF~~~~vl~~H~--s~VKGvs~DP~Gky~ 186 (942)
T KOG0973|consen 118 SWKVVSILRGH-DSDVLDVNWSPDDSLLVSVSLDN--------SVIIWNAKTFELLKVLRGHQ--SLVKGVSWDPIGKYF 186 (942)
T ss_pred eeeEEEEEecC-CCccceeccCCCccEEEEecccc--------eEEEEccccceeeeeeeccc--ccccceEECCccCee
Confidence 33466666675 79999999999999898988887 999999999966655 4665 999999999998 6
Q ss_pred ee-eCCCeEEEEECCCCCEEEEeec---------------------------------------------------CCCC
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFTCIES---------------------------------------------------GDQT 114 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~tie~---------------------------------------------------~h~~ 114 (248)
+| +||++||||+..+....+++.. +|.+
T Consensus 187 ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~ 266 (942)
T KOG0973|consen 187 ASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSA 266 (942)
T ss_pred eeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCC
Confidence 65 6999999999765333333211 3788
Q ss_pred CeeEEEEeC-----CCC------------EEEEEeCCCeEEEEEc
Q psy2083 115 QFNNLCHIP-----ESG------------MMFIANENKKILTYYI 142 (248)
Q Consensus 115 ~In~l~~~p-----dsg------------ll~sa~ed~~I~~w~I 142 (248)
++.++.|+| +-+ .+++|+.|+.|.+|--
T Consensus 267 p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T 311 (942)
T KOG0973|consen 267 PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNT 311 (942)
T ss_pred ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEec
Confidence 999999986 112 7899999999999975
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-09 Score=101.61 Aligned_cols=124 Identities=10% Similarity=0.147 Sum_probs=94.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
-|+.++.|..++-.. +.+++++..+ ..+++|- +|++||+||+|++.++....-+ +.|+++..+.++
T Consensus 288 WDl~k~~C~kt~l~~--S~cnDI~~~~---~~~~SgH-------~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~ls~~g 353 (459)
T KOG0288|consen 288 WDLQKAYCSKTVLPG--SQCNDIVCSI---SDVISGH-------FDKKVRFWDIRSADKTRSVPLG--GRVTSLDLSMDG 353 (459)
T ss_pred hhhhhhheecccccc--ccccceEecc---eeeeecc-------cccceEEEeccCCceeeEeecC--cceeeEeeccCC
Confidence 355667777775554 5667777652 2333322 3459999999999988876544 689999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+ ++-|.++++.|.++.+..+++... ..++.+-++|+|++.++++|+.|+.|++|.+-
T Consensus 354 ~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~ 417 (459)
T KOG0288|consen 354 LELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF 417 (459)
T ss_pred eEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc
Confidence 55 457899999999998888877641 13578899999999999999999999999864
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.1e-09 Score=96.17 Aligned_cols=133 Identities=16% Similarity=0.232 Sum_probs=99.3
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE-----EecCCCCCCeeEEEEcCCc----
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR-----VKDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-----~~~h~~~~pI~sI~F~~d~---- 85 (248)
++|..+|.+-|+++.|.+-|..++++++|. +|++||.+++.-.+ .+.|. ..|..|.|-+..
T Consensus 6 ~pi~s~h~DlihdVs~D~~GRRmAtCSsDq--------~vkI~d~~~~s~~W~~Ts~Wrah~--~Si~rV~WAhPEfGqv 75 (361)
T KOG2445|consen 6 APIDSGHKDLIHDVSFDFYGRRMATCSSDQ--------TVKIWDSTSDSGTWSCTSSWRAHD--GSIWRVVWAHPEFGQV 75 (361)
T ss_pred cccccCCcceeeeeeecccCceeeeccCCC--------cEEEEeccCCCCceEEeeeEEecC--CcEEEEEecCccccce
Confidence 456777777788888877676677777775 99999998763322 24555 899999996542
Q ss_pred eee-eCCCeEEEEECCC------C---CEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 86 VLS-MDSSVVKIWSKDN------G---SLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~t------G---k~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
|++ |-|++++||.... | ...+++.. ..+.|.+++|.| -|=+|++++.||.+++|..|..+..-.|-
T Consensus 76 vA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D-srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~- 153 (361)
T KOG2445|consen 76 VATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD-SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT- 153 (361)
T ss_pred EEEEecCCceeeeeecccccccccceeEEEEEeec-CCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch-
Confidence 444 5799999999731 2 23455554 268999999999 45567888999999999999999999996
Q ss_pred cccchhhhhh
Q psy2083 154 FLDNLTEELE 163 (248)
Q Consensus 154 ~ld~~tee~e 163 (248)
|+-|+.
T Consensus 154 ----Lq~Ei~ 159 (361)
T KOG2445|consen 154 ----LQHEIQ 159 (361)
T ss_pred ----hhhhhh
Confidence 555555
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.2e-10 Score=106.55 Aligned_cols=150 Identities=15% Similarity=0.238 Sum_probs=119.6
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
.|...+.+++.+||+.++++++-|. .|.|||.++..++.+ ++|. .+|.+++|-... .++|-|++||
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~--------~v~Iw~~~t~ehv~~~~ghr--~~V~~L~fr~gt~~lys~s~Drsvk 269 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDR--------HVQIWDCDTLEHVKVFKGHR--GAVSSLAFRKGTSELYSASADRSVK 269 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCc--------eEEEecCcccchhhcccccc--cceeeeeeecCccceeeeecCCceE
Confidence 4578999999999999999988886 899999999999988 5565 899999998654 5567899999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC----CCCCCccccccchhhhhhcccccccc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL----GPAPKWCGFLDNLTEELEENIIENVY 171 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l----G~aP~wcs~ld~~tee~e~~~~~~~y 171 (248)
+|+.+.-..+.++-+ |+..|.++....-..++-+|+.|+++++|.||.= -.++ |+++|. -..-
T Consensus 270 vw~~~~~s~vetlyG-Hqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~--~~sidc----------v~~I 336 (479)
T KOG0299|consen 270 VWSIDQLSYVETLYG-HQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGG--EGSIDC----------VAFI 336 (479)
T ss_pred EEehhHhHHHHHHhC-CccceeeechhcccceEEeccccceeEEEeccccceeeeeCC--CCCeee----------EEEe
Confidence 999998777888887 6999999888888888888889999999999752 0111 333332 2346
Q ss_pred CCceeecHhHHhhcCCccccC
Q psy2083 172 DDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 172 d~y~fvt~~~l~~l~~~~lig 192 (248)
++..|||=++.-.+.||.+.-
T Consensus 337 n~~HfvsGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 337 NDEHFVSGSDNGSIALWSLLK 357 (479)
T ss_pred cccceeeccCCceEEEeeecc
Confidence 778899888877777776443
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-09 Score=98.72 Aligned_cols=111 Identities=15% Similarity=0.289 Sum_probs=82.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----ceeE---EecCCCCCCeeEEEEcC-----
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPLR---VKDHMYGLPIRDIKFHD----- 83 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~---~~~h~~~~pI~sI~F~~----- 83 (248)
+.+| .+.|+++||++|+..++++++|. +|+|||+|.- +.+. ..+|. +.|.|.|
T Consensus 82 LKgH-~~~vt~~~FsSdGK~lat~~~Dr--------~Ir~w~~~DF~~~eHr~~R~nve~dhp-----T~V~FapDc~s~ 147 (420)
T KOG2096|consen 82 LKGH-KKEVTDVAFSSDGKKLATISGDR--------SIRLWDVRDFENKEHRCIRQNVEYDHP-----TRVVFAPDCKSV 147 (420)
T ss_pred hhcc-CCceeeeEEcCCCceeEEEeCCc--------eEEEEecchhhhhhhhHhhccccCCCc-----eEEEECCCcceE
Confidence 4454 79999999999998899998885 9999999863 1111 11221 1222221
Q ss_pred --------------------------------------------------Cc--eee-eCCCeEEEEECCCCCEEEEeec
Q psy2083 84 --------------------------------------------------NY--VLS-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 84 --------------------------------------------------d~--l~S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
+. |+| +.|..|-|||.+ |+++.++..
T Consensus 148 vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idt 226 (420)
T KOG2096|consen 148 VVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDT 226 (420)
T ss_pred EEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecc
Confidence 11 555 468889999998 888776532
Q ss_pred -------------------------------------------------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 111 -------------------------------------------------GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 111 -------------------------------------------------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+|++.|..+||+|+|..+++++.||++++|+
T Consensus 227 nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwd 306 (420)
T KOG2096|consen 227 NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWD 306 (420)
T ss_pred ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEee
Confidence 3788999999999999999999999999998
Q ss_pred c
Q psy2083 142 I 142 (248)
Q Consensus 142 I 142 (248)
+
T Consensus 307 t 307 (420)
T KOG2096|consen 307 T 307 (420)
T ss_pred c
Confidence 6
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.9e-09 Score=101.58 Aligned_cols=128 Identities=14% Similarity=0.241 Sum_probs=93.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
|-++++..++++.-. +.|..++|++++..++++|+++ .|.+||+|....+..+ +.+ +.-=++++-+++
T Consensus 330 LhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~~~G--------eV~v~nl~~~~~~~rf~D~G-~v~gts~~~S~n 398 (514)
T KOG2055|consen 330 LHAKTKELITSFKIE--GVVSDFTFSSDSKELLASGGTG--------EVYVWNLRQNSCLHRFVDDG-SVHGTSLCISLN 398 (514)
T ss_pred ehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEcCCc--------eEEEEecCCcceEEEEeecC-ccceeeeeecCC
Confidence 456788899998874 7899999999998888888885 8999999999887765 322 112256666666
Q ss_pred c--ee-eeCCCeEEEEECCC------CCEEEE----------eecC----------------------------------
Q psy2083 85 Y--VL-SMDSSVVKIWSKDN------GSLFTC----------IESG---------------------------------- 111 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~t------Gk~~~t----------ie~~---------------------------------- 111 (248)
+ ++ +|+.|+|.|||.++ -+++.+ ++-+
T Consensus 399 g~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~ 478 (514)
T KOG2055|consen 399 GSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTS 478 (514)
T ss_pred CceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCC
Confidence 6 44 46899999999653 122211 1100
Q ss_pred --CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 112 --DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 112 --h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.-.-++|++|+|+||+|++|++++++.+|-+..
T Consensus 479 n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 479 NTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred CCcccceEEEEecCCCceEEeecCCCceeeEeecc
Confidence 023579999999999999999999999997643
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.8e-10 Score=109.11 Aligned_cols=120 Identities=10% Similarity=0.161 Sum_probs=102.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
+.+-++=+| .-+|.+...+||+.+++++|.|. .|++|-+.=|.+-... +.|+..|.+|.|.|.. ..+
T Consensus 541 KFflsLYGH-kLPV~smDIS~DSklivTgSADK--------nVKiWGLdFGDCHKS~-fAHdDSvm~V~F~P~~~~FFt~ 610 (888)
T KOG0306|consen 541 KFFLSLYGH-KLPVLSMDISPDSKLIVTGSADK--------NVKIWGLDFGDCHKSF-FAHDDSVMSVQFLPKTHLFFTC 610 (888)
T ss_pred eeeeeeccc-ccceeEEeccCCcCeEEeccCCC--------ceEEeccccchhhhhh-hcccCceeEEEEcccceeEEEe
Confidence 334444454 78999999999999999999887 8999999888664442 3445899999999986 556
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-|+.||-||.++-+.+.++.+ |...|.+++++|+|+++++++-|..|++|.-
T Consensus 611 gKD~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 611 GKDGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred cCcceEEeechhhhhhheeecc-chheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 6899999999999999999999 6999999999999999999999999999963
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-09 Score=100.64 Aligned_cols=125 Identities=12% Similarity=0.156 Sum_probs=100.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~pI~sI~F~ 82 (248)
.|.+++.+..+.+.+ +.|+++.-++++-.+.+++.|+ ++.+.|+|+..-...+ ....+..++.+.|+
T Consensus 327 wD~Rs~~~~~sv~~g--g~vtSl~ls~~g~~lLsssRDd--------tl~viDlRt~eI~~~~sA~g~k~asDwtrvvfS 396 (459)
T KOG0288|consen 327 WDIRSADKTRSVPLG--GRVTSLDLSMDGLELLSSSRDD--------TLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFS 396 (459)
T ss_pred EeccCCceeeEeecC--cceeeEeeccCCeEEeeecCCC--------ceeeeecccccEEEEeeccccccccccceeEEC
Confidence 356788888888887 6899999888776688888887 9999999997433332 11223458999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCC-CeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQT-QFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~-~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|++ +++|.|+.|+||+..+||+...+...+.. .|++++|+|-|..+++++.+..+.+|
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred CCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 998 44568999999999999999888753233 69999999999999999999999988
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.2e-10 Score=99.70 Aligned_cols=118 Identities=14% Similarity=0.261 Sum_probs=91.2
Q ss_pred CCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee-eCCCeEEEE
Q psy2083 23 TQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIW 97 (248)
...++-.++| -+|..+++.++. ++.-||+|+-+........|+.-|.++.|+|+. +++ +||+.||||
T Consensus 171 ~~ftsg~WspHHdgnqv~tt~d~--------tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriW 242 (370)
T KOG1007|consen 171 HSFTSGAWSPHHDGNQVATTSDS--------TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIW 242 (370)
T ss_pred ceecccccCCCCccceEEEeCCC--------cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEE
Confidence 3455566666 345555444443 899999999876655444455889999999997 444 589999999
Q ss_pred ECCC-CCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 98 SKDN-GSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 98 D~~t-Gk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
|.++ ..+++++.+ |...|.+|.|+| ...+|++++.|..|.+|...+....|
T Consensus 243 D~R~tk~pv~el~~-HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~ 295 (370)
T KOG1007|consen 243 DTRKTKFPVQELPG-HSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ 295 (370)
T ss_pred eccCCCccccccCC-CceEEEEEEecCccceEEEecCCCceeEEEecccccccc
Confidence 9986 458889988 799999999999 56899999999999999877665444
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.5e-09 Score=94.12 Aligned_cols=163 Identities=12% Similarity=0.133 Sum_probs=122.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|.++|++++.++.. +.=+.++++|+++++++++-|+ .|-..|.|..+++...... ..++.++|+-+.
T Consensus 92 wd~r~~k~~~~i~~~--~eni~i~wsp~g~~~~~~~kdD--------~it~id~r~~~~~~~~~~~--~e~ne~~w~~~n 159 (313)
T KOG1407|consen 92 WDIRSGKCTARIETK--GENINITWSPDGEYIAVGNKDD--------RITFIDARTYKIVNEEQFK--FEVNEISWNNSN 159 (313)
T ss_pred EEeccCcEEEEeecc--CcceEEEEcCCCCEEEEecCcc--------cEEEEEecccceeehhccc--ceeeeeeecCCC
Confidence 467889999998875 3445788899999888888888 7999999999887766544 678999998655
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhh
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEEL 162 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~ 162 (248)
+++..-|+|.|-..-.=+++++|+. |++.--++.|+|+|.++++|+.|..+.+||+..|-..- =-+.| ||
T Consensus 160 d~Fflt~GlG~v~ILsypsLkpv~si~A-H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R-~isRl-----dw 232 (313)
T KOG1407|consen 160 DLFFLTNGLGCVEILSYPSLKPVQSIKA-HPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER-CISRL-----DW 232 (313)
T ss_pred CEEEEecCCceEEEEecccccccccccc-CCcceEEEEECCCCceEeeccccceeeccChhHhhhhe-eeccc-----cC
Confidence 6677789999988888899999999 68777778899999999999999999999987764321 00111 12
Q ss_pred hccccccccCCceeecHhHHhhcCC
Q psy2083 163 EENIIENVYDDYKFVTRQELEDLGL 187 (248)
Q Consensus 163 e~~~~~~~yd~y~fvt~~~l~~l~~ 187 (248)
--.+..+-||+-...+-+|..-+.+
T Consensus 233 pVRTlSFS~dg~~lASaSEDh~IDI 257 (313)
T KOG1407|consen 233 PVRTLSFSHDGRMLASASEDHFIDI 257 (313)
T ss_pred ceEEEEeccCcceeeccCccceEEe
Confidence 2224455577666666665554444
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=99.44 Aligned_cols=90 Identities=14% Similarity=0.257 Sum_probs=78.2
Q ss_pred CeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCC
Q psy2083 52 PAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPE 124 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pd 124 (248)
|.|++.|+-+++.... ..|+ ..|+.|.|+|+. |+| |.|.+||+||++++.++..|-+ +|...|.++.|+++
T Consensus 115 GvIrVid~~~~~~~~~~~ghG--~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~ 192 (385)
T KOG1034|consen 115 GVIRVIDVVSGQCSKNYRGHG--GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLD 192 (385)
T ss_pred eEEEEEecchhhhccceeccC--ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCC
Confidence 5899999999876544 3554 899999999986 444 6799999999999999988754 37899999999999
Q ss_pred CCEEEEEeCCCeEEEEEcC
Q psy2083 125 SGMMFIANENKKILTYYIP 143 (248)
Q Consensus 125 sgll~sa~ed~~I~~w~Ip 143 (248)
|..|++++.|-.+++|.++
T Consensus 193 gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 193 GDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred CCeeeccCCcceEEEEecC
Confidence 9999999999999999987
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.7e-09 Score=94.02 Aligned_cols=120 Identities=12% Similarity=0.163 Sum_probs=96.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
+.+.+|..| .++-.++.|.|+|.++++|+.|. .|.|||+..=-++.... ..+-||+.|+|+.|+ |+|
T Consensus 180 kpv~si~AH-~snCicI~f~p~GryfA~GsADA--------lvSLWD~~ELiC~R~is-RldwpVRTlSFS~dg~~lASa 249 (313)
T KOG1407|consen 180 KPVQSIKAH-PSNCICIEFDPDGRYFATGSADA--------LVSLWDVDELICERCIS-RLDWPVRTLSFSHDGRMLASA 249 (313)
T ss_pred ccccccccC-CcceEEEEECCCCceEeeccccc--------eeeccChhHhhhheeec-cccCceEEEEeccCcceeecc
Confidence 456667776 56777888899988888888886 89999997744444432 334899999999998 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---------CeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---------KKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---------~~I~~w~Ip 143 (248)
|.|..|-|=+.+||..+..+.- .++.+.|+|+|...+|+-|++| +.+++|-.|
T Consensus 250 SEDh~IDIA~vetGd~~~eI~~--~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 250 SEDHFIDIAEVETGDRVWEIPC--EGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred CccceEEeEecccCCeEEEeec--cCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 5799999999999999999986 8999999999999999999876 356666443
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.1e-09 Score=105.78 Aligned_cols=129 Identities=14% Similarity=0.223 Sum_probs=102.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-----ecC--CCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-----KDH--MYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-----~~h--~~~~pI~s 78 (248)
++...+.+...+.+| .+.|..+.|+|.+..|++++.+ |+|++||+.++....+ ++- ....++..
T Consensus 123 ~~~~D~s~~~~lrgh-~apVl~l~~~p~~~fLAvss~d--------G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~ 193 (933)
T KOG1274|consen 123 LNLDDSSQEKVLRGH-DAPVLQLSYDPKGNFLAVSSCD--------GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTR 193 (933)
T ss_pred Eeccccchheeeccc-CCceeeeeEcCCCCEEEEEecC--------ceEEEEEcccchhhhhcccCCccccccccceeee
Confidence 455666677777776 6999999999987767776666 4999999999854332 211 11346788
Q ss_pred EEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCC-CCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 79 IKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 79 I~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~-~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|||++ ++-+-|+.||++++.++...-.+.+++. +.++++.|+|+|.+|+++.-+++|.+|++-
T Consensus 194 ~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 194 LAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred eeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 9999996 5567899999999999998888876433 459999999999999999999999999976
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.6e-08 Score=85.70 Aligned_cols=125 Identities=16% Similarity=0.354 Sum_probs=98.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+.....+..| ...|..+.|.|++..+++++. + +.+++||++.++++..... |..+|.++.|+|++ +
T Consensus 145 ~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 214 (466)
T COG2319 145 GKLIRTLEGH-SESVTSLAFSPDGKLLASGSSLD--------GTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLI 214 (466)
T ss_pred CeEEEEEecC-cccEEEEEECCCCCEEEecCCCC--------CceEEEEcCCCceEEeecc-CCCceEEEEEcCCcceEE
Confidence 4566666665 688888999998776666654 4 4999999999777766532 45899999999886 5
Q ss_pred ee-eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++ +.|+.|++||..++..+. .+.. |.... ..+|+|++.++++++.|+.+++|++.....
T Consensus 215 ~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 215 ASGSSDGTIRLWDLSTGKLLRSTLSG-HSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred EEecCCCcEEEEECCCCcEEeeecCC-CCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 55 679999999999888888 5776 45553 238999999999999999999999987655
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-08 Score=93.78 Aligned_cols=130 Identities=14% Similarity=0.275 Sum_probs=98.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEe-C--CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHI-P--ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~-~--~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~ 82 (248)
+|.+..+++.+|+.. ..+...+|.+ + .+.+++--++-. .|.|.|||+-+-+|+.... .|..+|-+++|+
T Consensus 111 ydI~~MklLhTI~t~-~~n~~gl~AlS~n~~n~ylAyp~s~t------~GdV~l~d~~nl~~v~~I~-aH~~~lAalafs 182 (391)
T KOG2110|consen 111 YDIKDMKLLHTIETT-PPNPKGLCALSPNNANCYLAYPGSTT------SGDVVLFDTINLQPVNTIN-AHKGPLAALAFS 182 (391)
T ss_pred Eecccceeehhhhcc-CCCccceEeeccCCCCceEEecCCCC------CceEEEEEcccceeeeEEE-ecCCceeEEEEC
Confidence 467778888888765 2444544443 3 333555443332 4799999999988887763 556999999999
Q ss_pred CCc--eeee-CCC-eEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 83 DNY--VLSM-DSS-VVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 83 ~d~--l~Ss-dd~-~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+++ ++++ +.| +||++.+.+|+.+..|.-+ ....|-+++|+||+.+|.+.++.++|++|-+.
T Consensus 183 ~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 183 PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 998 6654 555 6999999999999988742 12467799999999999999999999999864
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-09 Score=103.34 Aligned_cols=180 Identities=13% Similarity=0.182 Sum_probs=126.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
..+.+|.-+||+..|+++|... +|.||||.++.|-....- ..+.....++.+||. .+++.|+.|.|||
T Consensus 466 nyiRSckL~pdgrtLivGGeas--------tlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwD 537 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEAS--------TLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWD 537 (705)
T ss_pred cceeeeEecCCCceEEeccccc--------eeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEE
Confidence 4677888899888899988865 999999999877443211 112356678889987 5567899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC---------------CCCCCCccccccchhhhhh
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS---------------LGPAPKWCGFLDNLTEELE 163 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~---------------lG~aP~wcs~ld~~tee~e 163 (248)
+.+...+..|++ |+....|+.+++||.-|.+|+-|.+|+.||+.. ||--| .=|=|.--||
T Consensus 538 Lhnq~~VrqfqG-htDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP----~~dWlavGMe 612 (705)
T KOG0639|consen 538 LHNQTLVRQFQG-HTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCP----TGDWLAVGME 612 (705)
T ss_pred cccceeeecccC-CCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCC----Cccceeeecc
Confidence 999999999999 799999999999999999999999999999543 33222 2222222333
Q ss_pred ccccccccCCceeecHhHHhhcCCccccCCCcccccceeeeechhhHHHHhhhcCCh
Q psy2083 164 ENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPF 220 (248)
Q Consensus 164 ~~~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~ymhgyf~~~~ly~~~~~~~~~~ 220 (248)
.. +-.---+|+.|--.|++.+-.=-++=.+|--.+|+..-..|-+-+...|+
T Consensus 613 ns-----~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPy 664 (705)
T KOG0639|consen 613 NS-----NVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 664 (705)
T ss_pred cC-----cEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCcc
Confidence 21 11112234444444555442222455667778888888888777777665
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.8e-09 Score=105.21 Aligned_cols=108 Identities=17% Similarity=0.327 Sum_probs=88.8
Q ss_pred CCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC---cee----EE-ecCCCCCCeeEEEEcCCc----eeee
Q psy2083 23 TQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD---KPL----RV-KDHMYGLPIRDIKFHDNY----VLSM 89 (248)
Q Consensus 23 ~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl----~~-~~h~~~~pI~sI~F~~d~----l~Ss 89 (248)
..|+++.+.|-+-. |+.+++|+ .|+||-+..+ ++. .+ ..| +..|.++.|||=. ++++
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg--------~i~lWr~~a~gl~e~~~tPe~~lt~h--~eKI~slRfHPLAadvLa~as 697 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDG--------QINLWRLTANGLPENEMTPEKILTIH--GEKITSLRFHPLAADVLAVAS 697 (1012)
T ss_pred ceeeecccCCCChHHeeecccCc--------eEEEEEeccCCCCcccCCcceeeecc--cceEEEEEecchhhhHhhhhh
Confidence 47888888875444 76766664 8999999875 222 22 344 4899999999953 3446
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.|-+|+|||+.+++....+.+ |...|-+++|+|||..+++.|.|++|.+|.
T Consensus 698 yd~Ti~lWDl~~~~~~~~l~g-HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 698 YDSTIELWDLANAKLYSRLVG-HTDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred ccceeeeeehhhhhhhheecc-CcCceeEEEECCCCcceeeeecCceEEEeC
Confidence 789999999999999999998 799999999999999999999999999996
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=103.03 Aligned_cols=135 Identities=17% Similarity=0.230 Sum_probs=104.9
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS-M 89 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S-s 89 (248)
+.+.+| ++.||++.+..+|.+|+++++|. .+-+||.-..|+++..+.+|...|-++.|.|.. |+| +
T Consensus 44 ~eL~GH-~GCVN~LeWn~dG~lL~SGSDD~--------r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgA 114 (758)
T KOG1310|consen 44 AELTGH-TGCVNCLEWNADGELLASGSDDT--------RLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGA 114 (758)
T ss_pred hhhccc-cceecceeecCCCCEEeecCCcc--------eEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEecc
Confidence 345565 89999999999877777766665 799999998899998877888999999999974 554 5
Q ss_pred CCCeEEEEECCCCC----------EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 90 DSSVVKIWSKDNGS----------LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 90 dd~~IKIWD~~tGk----------~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
.|+-||++|+...+ ....+.- |...|..++..|++ ..+.+|+|||+|+.|||.. |.=|..-+.+
T Consensus 115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c-ht~rVKria~~p~~PhtfwsasEDGtirQyDiRE----ph~c~p~~~~ 189 (758)
T KOG1310|consen 115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSC-HTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE----PHVCNPDEDC 189 (758)
T ss_pred CcceEEEEecccccccccccCccchhhhhhh-hhhhhhheecCCCCCceEEEecCCcceeeecccC----CccCCccccc
Confidence 79999999998521 1222222 56778888889999 9999999999999999974 5567666655
Q ss_pred hhhhh
Q psy2083 159 TEELE 163 (248)
Q Consensus 159 tee~e 163 (248)
..+|-
T Consensus 190 ~~~l~ 194 (758)
T KOG1310|consen 190 PSILV 194 (758)
T ss_pred cHHHH
Confidence 55554
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.4e-09 Score=104.37 Aligned_cols=118 Identities=9% Similarity=0.113 Sum_probs=96.8
Q ss_pred EEecCCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCC------ceeEEecCCCCCCeeEEEEcCCc---
Q psy2083 16 CIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRAD------KPLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~------~pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
-+.. |.+.|+++.|+|- +++|++++.|. .|+||-|-.+ .|-....|+ +.+|-++.|||..
T Consensus 74 ~l~~-H~d~VtDl~FspF~D~LLAT~S~D~--------~VKiW~lp~g~~q~LSape~~~g~~-~~~vE~l~fHpTaDgi 143 (1012)
T KOG1445|consen 74 ILAA-HGDQVTDLGFSPFADELLATCSRDE--------PVKIWKLPRGHSQKLSAPEIDVGGG-NVIVECLRFHPTADGI 143 (1012)
T ss_pred eeec-ccceeeccCccccchhhhhcccCCC--------eeEEEecCCCcccccCCcceeecCC-ceEEEEeecccCcCce
Confidence 3444 4789999999984 56677777776 8999999744 233345555 3688999999964
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++..++++|||+.+++....+.+ |..-|.++.|+.||.+|++++.|++|.+||=.+
T Consensus 144 l~s~a~g~v~i~D~stqk~~~el~~-h~d~vQSa~WseDG~llatscKdkqirifDPRa 201 (1012)
T KOG1445|consen 144 LASGAHGSVYITDISTQKTAVELSG-HTDKVQSADWSEDGKLLATSCKDKQIRIFDPRA 201 (1012)
T ss_pred EEeccCceEEEEEcccCceeecccC-CchhhhccccccCCceEeeecCCcceEEeCCcc
Confidence 6677899999999999999999998 699999999999999999999999999998544
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.2e-09 Score=98.81 Aligned_cols=162 Identities=15% Similarity=0.195 Sum_probs=111.3
Q ss_pred cCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCe
Q psy2083 19 SGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSV 93 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~ 93 (248)
.+|.+.|-.+.+.-.-.. |+++|.|. ||+|||+.+++|..+..| |+.+|.+++|||.. |.+|-|++
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~--------TV~lWD~~~g~p~~s~~~-~~k~Vq~l~wh~~~p~~LLsGs~D~~ 310 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADK--------TVKLWDVDTGKPKSSITH-HGKKVQTLEWHPYEPSVLLSGSYDGT 310 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCc--------eEEEEEcCCCCcceehhh-cCCceeEEEecCCCceEEEeccccce
Confidence 456777877777655444 66666665 999999999999888764 35899999999975 44568999
Q ss_pred EEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcccccccc
Q psy2083 94 VKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVY 171 (248)
Q Consensus 94 IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~y 171 (248)
|++.|.+. +..-..+.. .+.|-.++|.|.+ ..++++.+||+++-+++.+.| -|-|- |..=-+|..- -.-..-
T Consensus 311 V~l~D~R~~~~s~~~wk~--~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~-~~vwt--~~AHd~~ISg-l~~n~~ 384 (463)
T KOG0270|consen 311 VALKDCRDPSNSGKEWKF--DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG-KPVWT--LKAHDDEISG-LSVNIQ 384 (463)
T ss_pred EEeeeccCccccCceEEe--ccceEEEEecCCCceeEEEecCCceEEeeecCCCC-CceeE--EEeccCCcce-EEecCC
Confidence 99999983 222223444 5678889999988 456677799999999999988 66675 1110010000 000112
Q ss_pred CCceeecHhHHhhcCCccccCCCc
Q psy2083 172 DDYKFVTRQELEDLGLGHLIGTSL 195 (248)
Q Consensus 172 d~y~fvt~~~l~~l~~~~ligt~~ 195 (248)
--+-.+|-...+.+.||.+-+++-
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~~~~ 408 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDVDSP 408 (463)
T ss_pred CCcceeeccccceEEEEeecCCCC
Confidence 245566777788888888777643
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-09 Score=103.25 Aligned_cols=206 Identities=18% Similarity=0.252 Sum_probs=138.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
+|-.+|++++.|-.+ .+.+...+-.|-+..+-++.+. |+|.||--.+..||.. .-|. .||++|+++++
T Consensus 236 ~DVS~GklVa~~~t~-~G~~~vm~qNP~NaVih~Ghsn--------GtVSlWSP~skePLvKiLcH~--g~V~siAv~~~ 304 (545)
T KOG1272|consen 236 QDVSTGKLVASIRTG-AGRTDVMKQNPYNAVIHLGHSN--------GTVSLWSPNSKEPLVKILCHR--GPVSSIAVDRG 304 (545)
T ss_pred EeechhhhhHHHHcc-CCccchhhcCCccceEEEcCCC--------ceEEecCCCCcchHHHHHhcC--CCcceEEECCC
Confidence 466789998888776 5777778888877766566555 4999999999999765 3454 99999999999
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
+ +.++-|+.|||||+++-..+.++.. +.+.+.++||.-| +++++....+.+|-= .++..| |...-=+..-
T Consensus 305 G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t--p~~a~~ls~Sqkg--lLA~~~G~~v~iw~d-~~~~s~--~~~~pYm~H~ 377 (545)
T KOG1272|consen 305 GRYMATTGLDRKVKIWDLRNFYQLHTYRT--PHPASNLSLSQKG--LLALSYGDHVQIWKD-ALKGSG--HGETPYMNHR 377 (545)
T ss_pred CcEEeecccccceeEeeeccccccceeec--CCCcccccccccc--ceeeecCCeeeeehh-hhcCCC--CCCcchhhhc
Confidence 8 5556899999999999888888876 6788888887554 456777889999941 111112 2111111111
Q ss_pred hhccccccccCCceeecHhHHhhcCCccccC-CCcccccceeeeechhhHHHHhhhcCChhhHHHHH-HHHHHHHHHHhh
Q psy2083 162 LEENIIENVYDDYKFVTRQELEDLGLGHLIG-TSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKK-KKIRERIEQERT 239 (248)
Q Consensus 162 ~e~~~~~~~yd~y~fvt~~~l~~l~~~~lig-t~~l~~ymhgyf~~~~ly~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (248)
....-.+-.|+.-+++ ||+.|.-| ||+|-|=-= -.-|+ -.-.|||.=...|| +.|+.-||+-+.
T Consensus 378 -----~~~~V~~l~FcP~EDv--LGIGH~~G~tsilVPGsG-----ePN~D--s~e~nPfetrKQRqE~EVr~LLeKipp 443 (545)
T KOG1272|consen 378 -----CGGPVEDLRFCPYEDV--LGIGHAGGITSILVPGSG-----EPNYD--SLEDNPFETRKQRQEKEVRSLLEKIPP 443 (545)
T ss_pred -----cCcccccceeccHHHe--eeccccCCceeEeccCCC-----CCCcc--hhccCcchhhhHHhHHHHHHHHhhCCh
Confidence 1124567889998876 78888888 666644211 00111 12367886666655 446766776655
Q ss_pred cCcc
Q psy2083 240 RGVQ 243 (248)
Q Consensus 240 ~r~~ 243 (248)
.=|+
T Consensus 444 ElIs 447 (545)
T KOG1272|consen 444 ELIS 447 (545)
T ss_pred HhEE
Confidence 5444
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=7e-09 Score=95.95 Aligned_cols=128 Identities=8% Similarity=0.099 Sum_probs=94.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~- 85 (248)
..+.+-++.+| .+.=..++|+|- .|.++++--- +.|.+|...++....- ..-+|...|-.++|+|..
T Consensus 200 ~~~Pl~t~~gh-k~EGy~LdWSp~~~g~LlsGDc~--------~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~ 270 (440)
T KOG0302|consen 200 EFRPLFTFNGH-KGEGYGLDWSPIKTGRLLSGDCV--------KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTED 270 (440)
T ss_pred ccCceEEeccc-CccceeeecccccccccccCccc--------cceEeeeeccCceeecCccccccccchhhhccCCccC
Confidence 34577777776 577789999983 3334443222 3799999988743221 112345889999999975
Q ss_pred --eee-eCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++| |-|++|||||++.+. ++.+ .. |.++||-+.|+-+-++|++|++||++++|++.++-+.
T Consensus 271 ~vfaScS~DgsIrIWDiRs~~~~~~~~~-kA-h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~ 337 (440)
T KOG0302|consen 271 GVFASCSCDGSIRIWDIRSGPKKAAVST-KA-HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG 337 (440)
T ss_pred ceEEeeecCceEEEEEecCCCccceeEe-ec-cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC
Confidence 444 469999999999983 3333 55 6899999999998889999999999999999988543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.1e-09 Score=98.62 Aligned_cols=108 Identities=17% Similarity=0.297 Sum_probs=81.5
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIW 97 (248)
...++.|+.+++.++.++.-+ -.-+||+|+++.-.. .-|. ..|++|+++|-. ++ ++.|++.|||
T Consensus 281 ~fs~~d~~~e~~~vl~~~~~G--------~f~~iD~R~~~s~~~~~~lh~--kKI~sv~~NP~~p~~laT~s~D~T~kIW 350 (498)
T KOG4328|consen 281 WFSSLDFSAESRSVLFGDNVG--------NFNVIDLRTDGSEYENLRLHK--KKITSVALNPVCPWFLATASLDQTAKIW 350 (498)
T ss_pred eeeeccccCCCccEEEeeccc--------ceEEEEeecCCccchhhhhhh--cccceeecCCCCchheeecccCcceeee
Confidence 344555566677766665553 789999999854222 2344 689999999975 44 4689999999
Q ss_pred ECCC--CCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 98 SKDN--GSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 98 D~~t--Gk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|.+. ++. +.++ + |...|++++|+|.||.|++.+.|..|++|+..
T Consensus 351 D~R~l~~K~sp~lst~-~-HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 351 DLRQLRGKASPFLSTL-P-HRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred ehhhhcCCCCcceecc-c-ccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 9986 332 3343 3 58999999999999999999999999999974
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-09 Score=103.69 Aligned_cols=115 Identities=17% Similarity=0.279 Sum_probs=95.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--ee-e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VL-S 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~-S 88 (248)
.+.++.-+ ..++...++..+++++++.++- .|+++|+-+.+-+..+ +|+ ..|++.+|+||+ |+ +
T Consensus 527 l~~~l~l~--~~~~~iv~hr~s~l~a~~~ddf--------~I~vvD~~t~kvvR~f~gh~--nritd~~FS~DgrWlisa 594 (910)
T KOG1539|consen 527 LKKSLRLG--SSITGIVYHRVSDLLAIALDDF--------SIRVVDVVTRKVVREFWGHG--NRITDMTFSPDGRWLISA 594 (910)
T ss_pred eeeeeccC--CCcceeeeeehhhhhhhhcCce--------eEEEEEchhhhhhHHhhccc--cceeeeEeCCCCcEEEEe
Confidence 34444433 3577888888888888888886 7999999998766654 455 889999999998 54 5
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEE
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYY 141 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~ 141 (248)
+.|++||+||+-+|.++-.+-. ..+..++.|+|+|.+|+++..| .-|.+|-
T Consensus 595 smD~tIr~wDlpt~~lID~~~v--d~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 595 SMDSTIRTWDLPTGTLIDGLLV--DSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred ecCCcEEEEeccCcceeeeEec--CCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 6799999999999999999988 7899999999999999999988 6788885
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=90.76 Aligned_cols=123 Identities=14% Similarity=0.239 Sum_probs=94.6
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCc-eeEEecC-CCCCCeeEEEEcCCc---ee-
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADK-PLRVKDH-MYGLPIRDIKFHDNY---VL- 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h-~~~~pI~sI~F~~d~---l~- 87 (248)
+-+=.| ...|.+++|...+..+| ++|.| |.||+||||+-. ...++.. ....|...++|++.. ++
T Consensus 190 TQLIAH-DKEV~DIaf~~~s~~~FASvgaD--------GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymAT 260 (364)
T KOG0290|consen 190 TQLIAH-DKEVYDIAFLKGSRDVFASVGAD--------GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMAT 260 (364)
T ss_pred eEEEec-CcceeEEEeccCccceEEEecCC--------CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhh
Confidence 333344 48899999998655565 55555 499999999853 3444432 225688999998765 33
Q ss_pred -eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 -SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 -Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~ 147 (248)
..|+.-|-|-|++. +.++..++. |.+.||.++|.|.+ .-|.+|++|.++.+|++++...
T Consensus 261 f~~dS~~V~iLDiR~P~tpva~L~~-H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~ 322 (364)
T KOG0290|consen 261 FAMDSNKVVILDIRVPCTPVARLRN-HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR 322 (364)
T ss_pred hhcCCceEEEEEecCCCcceehhhc-CcccccceEecCCCCceeeecCCcceEEEEecccccc
Confidence 35788888999986 778999998 79999999999977 6799999999999999988544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.6e-08 Score=92.05 Aligned_cols=119 Identities=11% Similarity=0.257 Sum_probs=95.4
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-----------
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN----------- 84 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d----------- 84 (248)
.+.+ |.-.|.++|++++|..|++++.|. .|++||+++|.|+...-.. .||..+.|||.
T Consensus 60 ~lsa-H~~pi~sl~WS~dgr~LltsS~D~--------si~lwDl~~gs~l~rirf~--spv~~~q~hp~k~n~~va~~~~ 128 (405)
T KOG1273|consen 60 MLSA-HVRPITSLCWSRDGRKLLTSSRDW--------SIKLWDLLKGSPLKRIRFD--SPVWGAQWHPRKRNKCVATIME 128 (405)
T ss_pred hhhc-cccceeEEEecCCCCEeeeecCCc--------eeEEEeccCCCceeEEEcc--CccceeeeccccCCeEEEEEec
Confidence 3444 478999999999999999999997 8999999999988765333 78888888771
Q ss_pred ------------------------------------c--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 85 ------------------------------------Y--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 85 ------------------------------------~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
+ |+++ .+|-+-++|.+|-++++++.-.....|.++.|+-.|
T Consensus 129 ~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g 208 (405)
T KOG1273|consen 129 ESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKG 208 (405)
T ss_pred CCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccC
Confidence 1 3333 467788889888888888875212689999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCC
Q psy2083 126 GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~l 145 (248)
..|++-+.|+.|++|++..|
T Consensus 209 ~~liiNtsDRvIR~ye~~di 228 (405)
T KOG1273|consen 209 RFLIINTSDRVIRTYEISDI 228 (405)
T ss_pred cEEEEecCCceEEEEehhhh
Confidence 99999999999999998753
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.3e-09 Score=96.97 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=87.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
+.|..++.+|.+-++++++.. |.+.||.+.+|+.+.++. .|=.+|+++.|+.|+ +.++.|+-|.+|++
T Consensus 82 g~v~al~s~n~G~~l~ag~i~--------g~lYlWelssG~LL~v~~-aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l 152 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTIS--------GNLYLWELSSGILLNVLS-AHYQSITCLKFSDDGSHIITGSKDGAVLVWLL 152 (476)
T ss_pred cceeeeecCCCceEEEeeccc--------CcEEEEEeccccHHHHHH-hhccceeEEEEeCCCcEEEecCCCccEEEEEE
Confidence 467777777754444444344 489999999999888773 333799999999998 44568999999986
Q ss_pred C---------CCCEEEEeecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCC
Q psy2083 100 D---------NGSLFTCIESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~---------tGk~~~tie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~ 144 (248)
. +-+++..+.. |.-+|+++...+.| ..|+++++|.++++|++..
T Consensus 153 ~~lv~a~~~~~~~p~~~f~~-HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~ 207 (476)
T KOG0646|consen 153 TDLVSADNDHSVKPLHIFSD-HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL 207 (476)
T ss_pred EeecccccCCCccceeeecc-CcceeEEEEecCCCccceEEEecCCceEEEEEecc
Confidence 4 2467778887 79999999998764 7899999999999999743
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=2e-08 Score=90.78 Aligned_cols=115 Identities=10% Similarity=0.113 Sum_probs=88.8
Q ss_pred CCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----eeee-CCC
Q psy2083 20 GDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSM-DSS 92 (248)
Q Consensus 20 ~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~Ss-dd~ 92 (248)
+|.=.|.++.++| |.|+..+++-|. ++|+||..+-+....+... ..|.+-+++|=. |+.+ ++-
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDh--------tlKVWDtnTlQ~a~~F~me--~~VYshamSp~a~sHcLiA~gtr~~ 168 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDH--------TLKVWDTNTLQEAVDFKME--GKVYSHAMSPMAMSHCLIAAGTRDV 168 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccc--------eEEEeecccceeeEEeecC--ceeehhhcChhhhcceEEEEecCCC
Confidence 3455789999998 455544444454 9999999997655544322 567777777642 4444 678
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSL 145 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~l 145 (248)
.|++-|+.+|..-+++.+ |...|-.|.|+|.+. .|++|+.|+.|++|||.-.
T Consensus 169 ~VrLCDi~SGs~sH~LsG-Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 169 QVRLCDIASGSFSHTLSG-HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred cEEEEeccCCcceeeecc-ccCceEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 999999999999999999 799999999999885 4678899999999999764
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.5e-09 Score=96.88 Aligned_cols=121 Identities=12% Similarity=0.195 Sum_probs=94.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~ 87 (248)
..++++.-+ .+.|.++.|.|--..++ ++++|. .|-|||+|.+.|+...... ..-|+|+|+|.. ++
T Consensus 178 ~Pv~smswG-~Dti~svkfNpvETsILas~~sDr--------sIvLyD~R~~~Pl~KVi~~--mRTN~IswnPeafnF~~ 246 (433)
T KOG0268|consen 178 NPVSSMSWG-ADSISSVKFNPVETSILASCASDR--------SIVLYDLRQASPLKKVILT--MRTNTICWNPEAFNFVA 246 (433)
T ss_pred CccceeecC-CCceeEEecCCCcchheeeeccCC--------ceEEEecccCCccceeeee--ccccceecCccccceee
Confidence 355555554 57888999988655544 444554 8999999999998765333 456999999965 55
Q ss_pred eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..+-.+|.+. ..++....+ |.+.|.+|.|+|-|..+++|+-|.+|++|-+..
T Consensus 247 a~ED~nlY~~DmR~l~~p~~v~~d-hvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~ 303 (433)
T KOG0268|consen 247 ANEDHNLYTYDMRNLSRPLNVHKD-HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNH 303 (433)
T ss_pred ccccccceehhhhhhcccchhhcc-cceeEEEeccCCCcchhccccccceEEEeecCC
Confidence 56799999999986 456667776 689999999999999999999999999997543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.6e-09 Score=109.06 Aligned_cols=120 Identities=17% Similarity=0.339 Sum_probs=91.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc----eeee-CCC--eE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY----VLSM-DSS--VV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~----l~Ss-dd~--~I 94 (248)
+.|..+.+...-..+++++++. |.+.+||||..+|+... +|....-+..|+|||+. ++++ ||+ +|
T Consensus 162 ~eI~~lsWNrkvqhILAS~s~s-------g~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pvi 234 (1049)
T KOG0307|consen 162 SEIKCLSWNRKVSHILASGSPS-------GRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVI 234 (1049)
T ss_pred ccceEeccchhhhHHhhccCCC-------CCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCcee
Confidence 3566666665555655555543 58999999999998764 66644568899999996 4444 444 89
Q ss_pred EEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC---CCCCCC
Q psy2083 95 KIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS---LGPAPK 150 (248)
Q Consensus 95 KIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~---lG~aP~ 150 (248)
.+||.+. ..++..+++ |...|.++.|++.+ .+|++++.|++|..|..-. ||..|.
T Consensus 235 qlWDlR~assP~k~~~~-H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~ 294 (1049)
T KOG0307|consen 235 QLWDLRFASSPLKILEG-HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA 294 (1049)
T ss_pred EeecccccCCchhhhcc-cccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC
Confidence 9999775 567888887 79999999999966 9999999999999998654 556665
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=90.83 Aligned_cols=91 Identities=15% Similarity=0.228 Sum_probs=69.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCC-------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHM------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~------------- 71 (248)
-|+.+|.+-.++.+| .++|-.+.++|.+.++++.|+-+ |.|||||||.. .++.+.|..
T Consensus 173 CDi~SGs~sH~LsGH-r~~vlaV~Wsp~~e~vLatgsaD-------g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~a 244 (397)
T KOG4283|consen 173 CDIASGSFSHTLSGH-RDGVLAVEWSPSSEWVLATGSAD-------GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTA 244 (397)
T ss_pred EeccCCcceeeeccc-cCceEEEEeccCceeEEEecCCC-------ceEEEEEeecccceeEEeecccCccCcccccccc
Confidence 477899999999987 79999999999999855444433 49999999975 455554322
Q ss_pred CCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE
Q psy2083 72 YGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL 104 (248)
Q Consensus 72 ~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~ 104 (248)
|...|+.++|..++ ...+-|..+++|+..+|+.
T Consensus 245 h~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 245 HYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred ccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence 23578889999887 4445677899999988764
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-08 Score=94.04 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=101.3
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEec-----C---------CCCCCe
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKD-----H---------MYGLPI 76 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~-----h---------~~~~pI 76 (248)
++.+..| +-.+++++.+|++...|+++-++ +|.=||+-+++-. +..+ | .|-..|
T Consensus 135 ~~~~~~H-~~s~~~vals~d~~~~fsask~g--------~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~kei 205 (479)
T KOG0299|consen 135 FRVIGKH-QLSVTSVALSPDDKRVFSASKDG--------TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEI 205 (479)
T ss_pred ceeeccc-cCcceEEEeeccccceeecCCCc--------ceeeeehhcCcccccccccchhhhhccCCCCccccccccee
Confidence 5555555 68899999999999999998885 9999999988633 1111 1 334678
Q ss_pred eEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 77 RDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 77 ~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.+++.++|+ ++++ -|+.|.|||.++++.+.++.+ |...|.++||..+...+++++.|+.|++|.+.++
T Consensus 206 l~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~g-hr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~ 276 (479)
T KOG0299|consen 206 LTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKG-HRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL 276 (479)
T ss_pred EEEEEcCCCcEEEecCCCceEEEecCcccchhhcccc-cccceeeeeeecCccceeeeecCCceEEEehhHh
Confidence 899999998 6655 588999999999999999998 7999999999999999999999999999998763
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-07 Score=86.57 Aligned_cols=91 Identities=14% Similarity=0.335 Sum_probs=78.4
Q ss_pred CeeEEEEcCCCce---eEEecCCCCCCeeEEEEcCCc--eeee-CCC-eEEEEECCCCCEEEEeecC-CCCCeeEEEEeC
Q psy2083 52 PAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHDNY--VLSM-DSS-VVKIWSKDNGSLFTCIESG-DQTQFNNLCHIP 123 (248)
Q Consensus 52 G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~-~IKIWD~~tGk~~~tie~~-h~~~In~l~~~p 123 (248)
|+|+|-|+.+-++ ..+..|. .+|.+++.+.++ |+++ ..| .|||||..+|+.+..+.-+ +.+.|-+++|+|
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 7999999998654 7888887 899999999998 6654 566 5999999999999988732 357999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCC
Q psy2083 124 ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+.+|+++|+.++++++-+..
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CccEEEEEcCCCeEEEEEeec
Confidence 999999999999999997654
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.4e-08 Score=84.61 Aligned_cols=124 Identities=9% Similarity=0.245 Sum_probs=102.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cC------CCCCCe
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DH------MYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h------~~~~pI 76 (248)
.|..+|++-.++.+| ++.|.+++--..++.++++++|+ +||+||.++++.+.+. .| ..+..|
T Consensus 141 ~dlE~G~i~r~~rGH-tDYvH~vv~R~~~~qilsG~EDG--------tvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wi 211 (325)
T KOG0649|consen 141 VDLEDGRIQREYRGH-TDYVHSVVGRNANGQILSGAEDG--------TVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWI 211 (325)
T ss_pred EEecCCEEEEEEcCC-cceeeeeeecccCcceeecCCCc--------cEEEEeccccceeEEeccccChhhcCcccCcee
Confidence 566789999998887 78998888766677788888875 9999999999876543 22 134568
Q ss_pred eEEEEcCCceeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-+++-+.|-++++....+.+|.+++.++.+.|.- ++++..+.|..| +++++++.+.|..|-+
T Consensus 212 gala~~edWlvCGgGp~lslwhLrsse~t~vfpi--pa~v~~v~F~~d--~vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 212 GALAVNEDWLVCGGGPKLSLWHLRSSESTCVFPI--PARVHLVDFVDD--CVLIGGEGNHVQSYTL 273 (325)
T ss_pred EEEeccCceEEecCCCceeEEeccCCCceEEEec--ccceeEeeeecc--eEEEeccccceeeeee
Confidence 8888888888888888899999999999999987 899999999755 7899999999999864
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-08 Score=96.26 Aligned_cols=115 Identities=11% Similarity=0.154 Sum_probs=94.3
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKI 96 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKI 96 (248)
++...|.+++..+.+.++++||..+ .+++||-|+++-+...- +|...|+.|-.++|+ |.+|.|++||+
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek--------~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt~~ls~sSDgtIrl 239 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEK--------DLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGTRLLSASSDGTIRL 239 (735)
T ss_pred CCccceeeeecCCcceEEEecCccc--------ceEEeccccccceeeee-ccccceEEEEEcCCCCeEeecCCCceEEe
Confidence 4467888888887554455555554 89999999987655432 445899999999998 55578999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.-.++++++.. |...|.++..+|+=..+.+|+.|+.|..-++..
T Consensus 240 WdLgqQrCl~T~~v-H~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 240 WDLGQQRCLATYIV-HKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN 286 (735)
T ss_pred eeccccceeeeEEe-ccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence 99999999999998 688899999999889999999999998877765
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-08 Score=91.43 Aligned_cols=96 Identities=15% Similarity=0.175 Sum_probs=76.8
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
.+++.. ..+++.|++-|.++++|+.++ .|.|||+-+.++-.+. .|- .||.+++|++++ +.+|.
T Consensus 19 ~tld~~---~a~~~~Fs~~G~~lAvGc~nG--------~vvI~D~~T~~iar~lsaH~--~pi~sl~WS~dgr~LltsS~ 85 (405)
T KOG1273|consen 19 HTLDNP---LAECCQFSRWGDYLAVGCANG--------RVVIYDFDTFRIARMLSAHV--RPITSLCWSRDGRKLLTSSR 85 (405)
T ss_pred eeccCC---ccceEEeccCcceeeeeccCC--------cEEEEEccccchhhhhhccc--cceeEEEecCCCCEeeeecC
Confidence 345544 256777777666677777774 8999999998765554 455 899999999998 55568
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
|..|++||...|.++..+.- .++|..+.|+|..
T Consensus 86 D~si~lwDl~~gs~l~rirf--~spv~~~q~hp~k 118 (405)
T KOG1273|consen 86 DWSIKLWDLLKGSPLKRIRF--DSPVWGAQWHPRK 118 (405)
T ss_pred CceeEEEeccCCCceeEEEc--cCccceeeecccc
Confidence 99999999999999999998 7999999999844
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=88.98 Aligned_cols=120 Identities=13% Similarity=0.207 Sum_probs=87.1
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc-CCc---ee
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH-DNY---VL 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~-~d~---l~ 87 (248)
++++..|.+.|.++.-.=-+..|+++++|. +|||+++|.+.+ +.+. .+|..||..++|- |.. |+
T Consensus 4 q~idt~H~D~IHda~lDyygkrlATcsSD~--------tVkIf~v~~n~~s~ll~~L-~Gh~GPVwqv~wahPk~G~iLA 74 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDG--------TVKIFEVRNNGQSKLLAEL-TGHSGPVWKVAWAHPKFGTILA 74 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcceeeeecCCc--------cEEEEEEcCCCCceeeeEe-cCCCCCeeEEeecccccCcEee
Confidence 445555667776665443355688888885 999999998754 3443 3556999999995 442 55
Q ss_pred ee-CCCeEEEEECCCCCEEEE--eecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCC
Q psy2083 88 SM-DSSVVKIWSKDNGSLFTC--IESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ss-dd~~IKIWD~~tGk~~~t--ie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~ 144 (248)
|+ -|+.|-||..++|+--.. ... |.+.||+++|.|++ -+|++|+.|++|.+..+..
T Consensus 75 ScsYDgkVIiWke~~g~w~k~~e~~~-h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~ 135 (299)
T KOG1332|consen 75 SCSYDGKVIIWKEENGRWTKAYEHAA-HSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS 135 (299)
T ss_pred EeecCceEEEEecCCCchhhhhhhhh-hcccceeecccccccceEEEEeeCCCcEEEEEEcC
Confidence 54 689888999998843222 223 68999999999965 4678889999999988765
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.9e-08 Score=85.23 Aligned_cols=112 Identities=13% Similarity=0.182 Sum_probs=88.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
++.|..+|..|.+.+|+++-.|. .+.|||||.++|++.+ |.|...|.+|.|+|.. +.++-|..||+=|
T Consensus 231 ssavaav~vdpsgrll~sg~~ds--------sc~lydirg~r~iq~f-~phsadir~vrfsp~a~yllt~syd~~ikltd 301 (350)
T KOG0641|consen 231 SSAVAAVAVDPSGRLLASGHADS--------SCMLYDIRGGRMIQRF-HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTD 301 (350)
T ss_pred cceeEEEEECCCcceeeeccCCC--------ceEEEEeeCCceeeee-CCCccceeEEEeCCCceEEEEecccceEEEee
Confidence 35788888888766666666665 8999999999998876 5666999999999986 5567899999999
Q ss_pred CCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 99 KDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 99 ~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. |.+-..+ -+.|...+-.+.|+|..=-+++.+.|+++.+|-+|
T Consensus 302 lq-gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 302 LQ-GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cc-cchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 87 4432221 12256666678899999889999999999999765
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-08 Score=96.23 Aligned_cols=113 Identities=15% Similarity=0.260 Sum_probs=90.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-------CCCeeEEEEcCCc-eeeeC-CC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-------GLPIRDIKFHDNY-VLSMD-SS 92 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-------~~pI~sI~F~~d~-l~Ssd-d~ 92 (248)
.+-|-++.|.|++-.+++|+.| |.|++||+.++..+...+-+. ..-|.+|.|..++ |+|+| .|
T Consensus 154 ~sRvLslsw~~~~~~i~~Gs~D--------g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G 225 (691)
T KOG2048|consen 154 KSRVLSLSWNPTGTKIAGGSID--------GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAG 225 (691)
T ss_pred cceEEEEEecCCccEEEecccC--------ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCc
Confidence 3567788888765546666666 489999999997766322111 1237789998887 88887 67
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|++||..+|.++.++.- |.+.|++++..++...+++|+-|++|-.|...
T Consensus 226 ~V~FWd~~~gTLiqS~~~-h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~ 275 (691)
T KOG2048|consen 226 TVTFWDSIFGTLIQSHSC-HDADVLALAVADNEDRVFSAGVDPKIIQYSLT 275 (691)
T ss_pred eEEEEcccCcchhhhhhh-hhcceeEEEEcCCCCeEEEccCCCceEEEEec
Confidence 999999999999999988 69999999999999999999999999888743
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-07 Score=86.16 Aligned_cols=132 Identities=14% Similarity=0.228 Sum_probs=90.4
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC--CCCCeeEEEEcCCc--
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM--YGLPIRDIKFHDNY-- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~--~~~pI~sI~F~~d~-- 85 (248)
.++.+..+.-- .+.+.+=++|| ...|.+-=.-++..+...+.|.+|||+.-+++.+.+.. +...+-.+++++..
T Consensus 66 qpr~Lkv~~~K-k~~~ICe~~fp-t~IL~VrmNr~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~y 143 (391)
T KOG2110|consen 66 QPRKLKVVHFK-KKTTICEIFFP-TSILAVRMNRKRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCY 143 (391)
T ss_pred CCceEEEEEcc-cCceEEEEecC-CceEEEEEccceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCce
Confidence 34444444332 23444444555 22232222333444445557999999999998876433 33345555555543
Q ss_pred ee---eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe-EEEEEcCC
Q psy2083 86 VL---SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK-ILTYYIPS 144 (248)
Q Consensus 86 l~---Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~-I~~w~Ip~ 144 (248)
++ +.+.+.|.|||..+=+++.+|+. |..++-+++|+|+|.+|++|++.|+ |++|.+|.
T Consensus 144 lAyp~s~t~GdV~l~d~~nl~~v~~I~a-H~~~lAalafs~~G~llATASeKGTVIRVf~v~~ 205 (391)
T KOG2110|consen 144 LAYPGSTTSGDVVLFDTINLQPVNTINA-HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE 205 (391)
T ss_pred EEecCCCCCceEEEEEcccceeeeEEEe-cCCceeEEEECCCCCEEEEeccCceEEEEEEcCC
Confidence 22 23688999999999999999998 7999999999999999999999987 58998876
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.9e-08 Score=93.85 Aligned_cols=124 Identities=12% Similarity=0.202 Sum_probs=99.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~ 87 (248)
.+.+.+.+| ++.|+.+-+...+.++++++.. |.|-|..+.++.-...+.|+.+..|.-+.|++.. .+
T Consensus 112 l~hr~lkdh-~stvt~v~YN~~DeyiAsvs~g--------Gdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~ 182 (673)
T KOG4378|consen 112 LIHRFLKDH-QSTVTYVDYNNTDEYIASVSDG--------GDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSI 182 (673)
T ss_pred HHhhhccCC-cceeEEEEecCCcceeEEeccC--------CcEEEEecccCccccceecCCCCeEEEeecccccceeeEe
Confidence 355555565 8999999998878777666544 4899999999876667778878889999999986 33
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|+++|.+||.....++..+...|.+|-..+||+| +-.+|++.+-|.+|.+||+.+
T Consensus 183 asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 183 ASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred eccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc
Confidence 469999999999977777666544799999999999 557888889999999999874
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.5e-07 Score=90.71 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=100.8
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss 89 (248)
+...+.++....|-++||. ++|-||++|.++ .|.=||+.+.+|+...+ ..+.+|.+++-+|.. .++|
T Consensus 60 ~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg--------~i~EwDl~~lk~~~~~d-~~gg~IWsiai~p~~~~l~Igc 129 (691)
T KOG2048|consen 60 LEPVIHGPEDRSIESLAWA-EGGRLFSSGLSG--------SITEWDLHTLKQKYNID-SNGGAIWSIAINPENTILAIGC 129 (691)
T ss_pred eeEEEecCCCCceeeEEEc-cCCeEEeecCCc--------eEEEEecccCceeEEec-CCCcceeEEEeCCccceEEeec
Confidence 4455677667788899988 478899999885 89999999999988776 346899999999986 6678
Q ss_pred CCCeEEEEECCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.+.+.+...++...... +...+.|-++.|.|++.-|++|+.|+.|++|++..
T Consensus 130 ddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 130 DDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKS 185 (691)
T ss_pred CCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCC
Confidence 99999999998887654332 21147899999999999999999999999999765
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.2e-08 Score=91.42 Aligned_cols=167 Identities=10% Similarity=0.116 Sum_probs=113.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~ 82 (248)
+..+-.+.+.+.-+ ...|.++.|.|--. .++++|+-. |+|-+||++...| -..+.+.|+.||.++.|+
T Consensus 172 ~l~~~~~~~v~kv~-~~Rit~l~fHPt~~~~lva~GdK~-------G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~ 243 (498)
T KOG4328|consen 172 DLDDYRILNVAKVT-DRRITSLAFHPTENRKLVAVGDKG-------GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFS 243 (498)
T ss_pred ccccceecceeEec-ccceEEEEecccCcceEEEEccCC-------CcEEEEecCCCCCccCceEEeccCCccccceEec
Confidence 33333444444443 46899999998655 466776665 6999999986544 345577888999999999
Q ss_pred CCc----eeeeCCCeEEEEECCCCCE---------------------------------EEEe------------ecCCC
Q psy2083 83 DNY----VLSMDSSVVKIWSKDNGSL---------------------------------FTCI------------ESGDQ 113 (248)
Q Consensus 83 ~d~----l~Ssdd~~IKIWD~~tGk~---------------------------------~~ti------------e~~h~ 113 (248)
|.. +++|.||+|+.=|.+++.. +..+ +. |.
T Consensus 244 P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~l-h~ 322 (498)
T KOG4328|consen 244 PANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRL-HK 322 (498)
T ss_pred CCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhh-hh
Confidence 975 5557899999888764211 1111 11 46
Q ss_pred CCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-ccccc---cCCceeecHhHHhhcCCc
Q psy2083 114 TQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-IIENV---YDDYKFVTRQELEDLGLG 188 (248)
Q Consensus 114 ~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-~~~~~---yd~y~fvt~~~l~~l~~~ 188 (248)
..|++|+++|-. .+|++|+-|.+.++||...|++-+.. ||- .+++. ....+ -++=..||..+...+++.
T Consensus 323 kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp--~ls----t~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ 396 (498)
T KOG4328|consen 323 KKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASP--FLS----TLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVF 396 (498)
T ss_pred cccceeecCCCCchheeecccCcceeeeehhhhcCCCCc--cee----cccccceeeeeEEcCCCCceEeeccCCceEEe
Confidence 689999999954 78999999999999999999887741 333 33443 11222 234457777777777764
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.9e-08 Score=94.64 Aligned_cols=125 Identities=18% Similarity=0.260 Sum_probs=86.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--------------------eeEE---ecC---CCCC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--------------------PLRV---KDH---MYGL 74 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--------------------pl~~---~~h---~~~~ 74 (248)
|+..|-++||.|.+..+|+.|+-+ |.|+|||+|... |... ..+ .++.
T Consensus 143 H~~SvkS~cf~~~n~~vF~tGgRD-------g~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ 215 (720)
T KOG0321|consen 143 HTGSVKSECFMPTNPAVFCTGGRD-------GEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASN 215 (720)
T ss_pred cccccchhhhccCCCcceeeccCC-------CcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccC
Confidence 378999999999999877665553 599999999754 1110 000 1112
Q ss_pred ----CeeEEEEcCCc-eeee--CCCeEEEEECCCCCEEEEeec------C-C---CCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 75 ----PIRDIKFHDNY-VLSM--DSSVVKIWSKDNGSLFTCIES------G-D---QTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 75 ----pI~sI~F~~d~-l~Ss--dd~~IKIWD~~tGk~~~tie~------~-h---~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
.|+.+.|..+. |+++ -|++||+||+++.......++ + | ...+.+++...-|..|++.|.|+.|
T Consensus 216 ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sI 295 (720)
T KOG0321|consen 216 TIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSI 295 (720)
T ss_pred ceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcE
Confidence 24456666555 6654 499999999996443333222 0 1 2356777777777999999999999
Q ss_pred EEEEcCCCCCCCCcc
Q psy2083 138 LTYYIPSLGPAPKWC 152 (248)
Q Consensus 138 ~~w~Ip~lG~aP~wc 152 (248)
..|.++.++..|.-|
T Consensus 296 y~ynm~s~s~sP~~~ 310 (720)
T KOG0321|consen 296 YFYNMRSLSISPVAE 310 (720)
T ss_pred EEEeccccCcCchhh
Confidence 999999999999766
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-08 Score=89.18 Aligned_cols=53 Identities=11% Similarity=0.207 Sum_probs=49.6
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-|+.|||+..+++.+++.+.- |.+.||+++|+||.+++++|+.|.+|.+|.+
T Consensus 270 GWD~RiRVyswrtl~pLAVLky-Hsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 270 GWDHRIRVYSWRTLNPLAVLKY-HSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ccCCcEEEEEeccCCchhhhhh-hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3589999999999999999998 6999999999999999999999999999974
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-07 Score=84.91 Aligned_cols=121 Identities=13% Similarity=0.225 Sum_probs=83.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC--cEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG--MMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~ 82 (248)
+|+++.+.+..+-.| ++.|+.+.|.++.. +|++|++|+ .|.+||..+=..+.. +.|. ..|+.|+.|
T Consensus 68 YDm~k~~qlg~ll~H-agsitaL~F~~~~S~shLlS~sdDG--------~i~iw~~~~W~~~~slK~H~--~~Vt~lsiH 136 (362)
T KOG0294|consen 68 YDMRKRKQLGILLSH-AGSITALKFYPPLSKSHLLSGSDDG--------HIIIWRVGSWELLKSLKAHK--GQVTDLSIH 136 (362)
T ss_pred Eeccchhhhcceecc-ccceEEEEecCCcchhheeeecCCC--------cEEEEEcCCeEEeeeecccc--cccceeEec
Confidence 467777788887776 79999999998876 788887774 999999987655544 5666 559999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|.+ +.-++|+.++.||+-+|+.-..+.- ...-..|.|+|.|..+++.+ ..+|-+|
T Consensus 137 PS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L--~~~at~v~w~~~Gd~F~v~~-~~~i~i~ 194 (362)
T KOG0294|consen 137 PSGKLALSVGGDQVLRTWNLVRGRVAFVLNL--KNKATLVSWSPQGDHFVVSG-RNKIDIY 194 (362)
T ss_pred CCCceEEEEcCCceeeeehhhcCccceeecc--CCcceeeEEcCCCCEEEEEe-ccEEEEE
Confidence 998 4447899999999998875443332 11112255555555444443 2334444
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.6e-07 Score=87.39 Aligned_cols=120 Identities=16% Similarity=0.261 Sum_probs=95.8
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
|-.+.++.++ .....++-.|+...++++|-|+ +|+||+ ..+|.+++-.. .|+.++.|||.+ +++
T Consensus 359 ~f~~~v~gh~--delwgla~hps~~q~~T~gqdk--------~v~lW~--~~k~~wt~~~~--d~~~~~~fhpsg~va~G 424 (626)
T KOG2106|consen 359 GFTLTVQGHG--DELWGLATHPSKNQLLTCGQDK--------HVRLWN--DHKLEWTKIIE--DPAECADFHPSGVVAVG 424 (626)
T ss_pred CceEEEEecc--cceeeEEcCCChhheeeccCcc--------eEEEcc--CCceeEEEEec--CceeEeeccCcceEEEe
Confidence 3344444443 5889999999888788888775 999999 67888887555 899999999999 445
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
...+-.-+-|.++.. +-++.. +..+++.+.|+|+|.+|++|+.|+.|.+|-|.+=|
T Consensus 425 t~~G~w~V~d~e~~~-lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g 480 (626)
T KOG2106|consen 425 TATGRWFVLDTETQD-LVTIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG 480 (626)
T ss_pred eccceEEEEecccce-eEEEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC
Confidence 567777789999844 445555 27899999999999999999999999999987644
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.6e-07 Score=76.71 Aligned_cols=122 Identities=16% Similarity=0.363 Sum_probs=88.2
Q ss_pred eeEEEecCCCCCeeEEEE-eCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEE-ecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCH-IPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRV-KDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~-~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~-~~h~~~~pI~sI~F~~d~--l~ 87 (248)
.+..+...+...+..+.+ .+++..++.+.++ .++.+.+||+.. ...... ..|. ..|+.++|+|++ ++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 171 (466)
T COG2319 100 LIKSLEGLHDSSVSKLALSSPDGNSILLASSS------LDGTVKLWDLSTPGKLIRTLEGHS--ESVTSLAFSPDGKLLA 171 (466)
T ss_pred eEEEEeccCCCceeeEEEECCCcceEEeccCC------CCccEEEEEecCCCeEEEEEecCc--ccEEEEEECCCCCEEE
Confidence 455555532225666666 5655534443333 135999999998 443333 3444 789999999998 44
Q ss_pred e-eC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcC
Q psy2083 88 S-MD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIP 143 (248)
Q Consensus 88 S-sd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip 143 (248)
+ +. ++.+++||..+++.+..+.+ |...|.+++++|++. ++++++.|+.|.+|+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 172 SGSSLDGTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred ecCCCCCceEEEEcCCCceEEeecc-CCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 4 33 99999999999999999998 689999999999998 55555999999999765
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-07 Score=88.11 Aligned_cols=121 Identities=8% Similarity=0.126 Sum_probs=92.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~ 87 (248)
+....+.+| +..|..+.++|--.. |+++|.|. +|.|||+-++..+.+.+|. .-|.+++|+.|+ +.
T Consensus 122 epvv~L~gH-~rrVg~V~wHPtA~NVLlsag~Dn--------~v~iWnv~tgeali~l~hp--d~i~S~sfn~dGs~l~T 190 (472)
T KOG0303|consen 122 EPVVELYGH-QRRVGLVQWHPTAPNVLLSAGSDN--------TVSIWNVGTGEALITLDHP--DMVYSMSFNRDGSLLCT 190 (472)
T ss_pred cceEEEeec-ceeEEEEeecccchhhHhhccCCc--------eEEEEeccCCceeeecCCC--CeEEEEEeccCCceeee
Confidence 345566676 788989999986555 77888887 8999999999998888866 889999999998 34
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCC-CCeeEEEEeCCCCEEEEE---eCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCHIPESGMMFIA---NENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~-~~In~l~~~pdsgll~sa---~ed~~I~~w~Ip~ 144 (248)
++-|+.|||||.++|+.+..-.+ |. +.-.-+.|-.+|.++-+| ..++++-+|+--.
T Consensus 191 tckDKkvRv~dpr~~~~v~e~~~-heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n 250 (472)
T KOG0303|consen 191 TCKDKKVRVIDPRRGTVVSEGVA-HEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN 250 (472)
T ss_pred ecccceeEEEcCCCCcEeeeccc-ccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence 46899999999999999987755 34 334456777788844444 2467889997443
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-07 Score=93.39 Aligned_cols=113 Identities=9% Similarity=0.156 Sum_probs=99.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..+.+...-|..+++++++-|. .|+|||+.+++....+ +|++.+..-+|...|.+ |+ |+.|+++-|+
T Consensus 597 tTlYDm~Vdp~~k~v~t~cQDr--------nirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~ 668 (1080)
T KOG1408|consen 597 TTLYDMAVDPTSKLVVTVCQDR--------NIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFV 668 (1080)
T ss_pred ceEEEeeeCCCcceEEEEeccc--------ceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEE
Confidence 4677888889899999999887 7999999999887764 67775667788899998 44 5689999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|-.+|+++++..+ |...|+.+-|.+|..-|++++.|+.|-+|-+|.
T Consensus 669 Df~sgEcvA~m~G-HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 669 DFVSGECVAQMTG-HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred EeccchhhhhhcC-cchheeeeeecccchhheeecCCceEEEEECch
Confidence 9999999999998 699999999999999999999999999999863
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.3e-07 Score=93.49 Aligned_cols=109 Identities=14% Similarity=0.246 Sum_probs=85.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
++..++|+-++.++++||+|- .|++-++-.+.. ...+.|. .||.+|.|+|.+ |++ +-||+|+|||.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~--------~vK~~~~~D~s~~~~lrgh~--apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDT--------AVKLLNLDDSSQEKVLRGHD--APVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred cceEEEEecCCcEEEeecCce--------eEEEEeccccchheeecccC--CceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 577888888776777777775 899999887644 3344555 999999999998 444 56999999999
Q ss_pred CCCCEEEEeec-------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIES-------GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~-------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+|.+..++.+ .....++-++|+|+||.+++.+-|+.|++|..
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r 217 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSR 217 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEcc
Confidence 99988777653 01234567899999999999999999999974
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.5e-08 Score=98.57 Aligned_cols=129 Identities=16% Similarity=0.261 Sum_probs=99.0
Q ss_pred CceeEEEecCC-CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 11 GSLFTCIESGD-QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 11 G~~~~~~~~~~-~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
.+.+..+..+. ...+..+.|+|+... ++++++|+ ....|.+||+|-. .|+.+. .+|...|.++.|++..
T Consensus 194 ~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd-----~~PviqlWDlR~assP~k~~-~~H~~GilslsWc~~D~~ 267 (1049)
T KOG0307|consen 194 KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDD-----SAPVIQLWDLRFASSPLKIL-EGHQRGILSLSWCPQDPR 267 (1049)
T ss_pred CCcccccccCCCccceeeeeeCCCCceeeeeecCCC-----CCceeEeecccccCCchhhh-cccccceeeeccCCCCch
Confidence 34444444331 134778889988666 66666766 4689999999975 788887 2345889999999865
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++ |+-|+.|-+|+.+||+.+..+-.+ ...+.++.|+| +.++|.+++=|++|.+|-+-..+
T Consensus 268 lllSsgkD~~ii~wN~~tgEvl~~~p~~-~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 268 LLLSSGKDNRIICWNPNTGEVLGELPAQ-GNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred hhhcccCCCCeeEecCCCceEeeecCCC-CcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 44 557888889999999999999873 68999999999 45799999999999999876543
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.3e-07 Score=85.64 Aligned_cols=117 Identities=10% Similarity=0.106 Sum_probs=98.7
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc------CCCceeEEecCCCCCCeeEEEEcCCc--eeee-CC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI------RADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DS 91 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl------Rs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd 91 (248)
|.+.||.+.|+..+.+|+++|+|. .++||.+ |+++|+..+.|.|...|-+++|.... |.|+ .+
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~--------~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDM--------HGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hccccceeeeccCCeEEeecCCcc--------eeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 478999999999888888888886 8999996 45699999999999999999998765 6665 68
Q ss_pred CeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++|-.-|+++.+.+..+.-+ ....|-.+..+|-.+.+++.+.++.|.+|++..-
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~ 181 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR 181 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence 99989999998877766531 1348999999999999999999999999998653
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.9e-07 Score=76.53 Aligned_cols=115 Identities=16% Similarity=0.231 Sum_probs=79.4
Q ss_pred eEEEEeCCCCcEE-EeecC-ceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc----eeee-CCCeEEEE
Q psy2083 26 NNLCHIPESGMMF-IANEN-KKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIW 97 (248)
Q Consensus 26 ~~~~~~~~~g~l~-~ag~d-~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIW 97 (248)
..+.+.|+|..|+ .+..+ ++---++-|...||-++.. .|..........+|.+++|+|++ ++.+ .++.|.||
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 4566667665544 33311 1111233467788888654 55555443334689999999997 3433 46799999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---CCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---NKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---d~~I~~w~Ip~ 144 (248)
|.+ ++.+.++. ...+|.++|+|+|.+|++|+- .+.|.+|++..
T Consensus 89 d~~-~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 89 DVK-GKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred cCc-ccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 997 88887775 468899999999999999874 46799999874
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.4e-07 Score=84.69 Aligned_cols=127 Identities=10% Similarity=0.122 Sum_probs=84.5
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|.....+..+ ...+...+|+||+..++.++.++ ...+|.+||++++++....... .....+.|+||+ |+
T Consensus 193 g~~~~~lt~~-~~~v~~p~wSPDG~~la~~s~~~-----~~~~i~i~dl~tg~~~~l~~~~--g~~~~~~wSPDG~~La~ 264 (429)
T PRK01742 193 GFNQFIVNRS-SQPLMSPAWSPDGSKLAYVSFEN-----KKSQLVVHDLRSGARKVVASFR--GHNGAPAFSPDGSRLAF 264 (429)
T ss_pred CCCceEeccC-CCccccceEcCCCCEEEEEEecC-----CCcEEEEEeCCCCceEEEecCC--CccCceeECCCCCEEEE
Confidence 4444454444 46789999999988777665432 1247999999988654332211 234578999997 43
Q ss_pred ee-CCCeEEEE--ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCC
Q psy2083 88 SM-DSSVVKIW--SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGP 147 (248)
Q Consensus 88 Ss-dd~~IKIW--D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~ 147 (248)
++ .++.+.|| |..+++ ...+.. +...+.+.+|+|||..|+.++ .++...+|.++.-+.
T Consensus 265 ~~~~~g~~~Iy~~d~~~~~-~~~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~ 326 (429)
T PRK01742 265 ASSKDGVLNIYVMGANGGT-PSQLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG 326 (429)
T ss_pred EEecCCcEEEEEEECCCCC-eEeecc-CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 33 56666665 666665 455665 366788999999998666554 578888998765443
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=91.30 Aligned_cols=91 Identities=10% Similarity=0.191 Sum_probs=77.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD 98 (248)
++.|+..||+||+.+|++++.|+ .+||+|.-+...+-+ .+.|=....+|+|+||+ | +++.|..|.||.
T Consensus 290 ~g~in~f~FS~DG~~LA~VSqDG--------fLRvF~fdt~eLlg~-mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwS 360 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATVSQDG--------FLRIFDFDTQELLGV-MKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWS 360 (636)
T ss_pred cccccceeEcCCCceEEEEecCc--------eEEEeeccHHHHHHH-HHhhccceEEEEEcCCccEEEecCCcceEEEEE
Confidence 46899999999999999998885 999999988654433 23444678999999998 4 456899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEe
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHI 122 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~ 122 (248)
...++.++.=++ |.++|+.|+|.
T Consensus 361 f~erRVVARGqG-HkSWVs~VaFD 383 (636)
T KOG2394|consen 361 FEERRVVARGQG-HKSWVSVVAFD 383 (636)
T ss_pred eccceEEEeccc-cccceeeEeec
Confidence 999999999998 79999999997
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.2e-07 Score=85.64 Aligned_cols=114 Identities=11% Similarity=0.177 Sum_probs=89.0
Q ss_pred CCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeE-----E---ecCCCCCCeeEEEEcCCc--eeee-
Q psy2083 22 QTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLR-----V---KDHMYGLPIRDIKFHDNY--VLSM- 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-----~---~~h~~~~pI~sI~F~~d~--l~Ss- 89 (248)
...|.++-|.+.+. .+++||+|. .|+||-+..+.|-. . .-.+|+..||.|.|+|++ ++|+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~--------~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~ 84 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDK--------DIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGG 84 (434)
T ss_pred CCceEEEEeccCcccceecccCcc--------ceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecC
Confidence 46888999988776 688888887 89999988764421 1 123455899999999998 5554
Q ss_pred CCCeEEEEECC--------C--------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSKD--------N--------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~~--------t--------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++.|-+|-.. + ......+.+ |..+|-++||+||+..+.+++-|..+.+|++..
T Consensus 85 D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~ 154 (434)
T KOG1009|consen 85 DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHA 154 (434)
T ss_pred CCceEEEEEecCcCCccccchhhhCccceEEEEEecc-cccchhhhhccCCCceeeeeeccceEEEEEecc
Confidence 78899999876 2 223334455 689999999999999999999999999999764
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.3e-07 Score=84.76 Aligned_cols=126 Identities=13% Similarity=0.238 Sum_probs=95.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----cee--EE---ecCCCC-CCeeEEEEcCCc--e
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPL--RV---KDHMYG-LPIRDIKFHDNY--V 86 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl--~~---~~h~~~-~pI~sI~F~~d~--l 86 (248)
+|++.|..+||+|++..+++++-|+ ++||||+.-. .|. .+ ..|.-+ .|+ .++.+|++ +
T Consensus 276 GH~saV~~~aFsn~S~r~vtvSkDG--------~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~g~~l 346 (420)
T KOG2096|consen 276 GHQSAVLAAAFSNSSTRAVTVSKDG--------KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RLELSPSGDSL 346 (420)
T ss_pred cchhheeeeeeCCCcceeEEEecCC--------cEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EEEeCCCCcEE
Confidence 3489999999999998888888885 9999997543 232 21 123323 355 89999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEE 164 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~ 164 (248)
+.+....++++..++|+.+-+++--|...|.++.|+|+|..+++++ |+.+++. +..|.|-+ .+++|+-
T Consensus 347 A~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~-----~ntpg~~~----~V~~~~~ 414 (420)
T KOG2096|consen 347 AVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVI-----RNTPGWHS----RVVKLNR 414 (420)
T ss_pred EeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeee-----cCCCchhh----HHHHhhc
Confidence 5567778999999999999888854689999999999999999888 5656554 66777764 4455553
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.2e-07 Score=89.43 Aligned_cols=156 Identities=13% Similarity=0.198 Sum_probs=104.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC---cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG---MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g---~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~ 82 (248)
.++.+--+.+++.+| ++.|+++++-|.+. .+++|++| |+|.+|-||.......+.-+. ..+..++++
T Consensus 39 ~dp~k~~i~t~l~GH-~a~VnC~~~l~~s~~~a~~vsG~sD--------~~v~lW~l~~~~~~~i~~~~g-~~~~~~cv~ 108 (764)
T KOG1063|consen 39 ADPEKILIVTTLDGH-VARVNCVHWLPTSEIVAEMVSGDSD--------GRVILWKLRDEYLIKIYTIQG-HCKECVCVV 108 (764)
T ss_pred eCcccceeEEeccCC-ccceEEEEEcccccccceEEEccCC--------CcEEEEEEeehheEEEEeecC-cceeEEEEE
Confidence 344444466666665 89999999999777 35555555 499999999554333332221 345666666
Q ss_pred CCc-eee--eCCCeEEEEECCCCC--------------------------------------------------EEEEee
Q psy2083 83 DNY-VLS--MDSSVVKIWSKDNGS--------------------------------------------------LFTCIE 109 (248)
Q Consensus 83 ~d~-l~S--sdd~~IKIWD~~tGk--------------------------------------------------~~~tie 109 (248)
... +.+ +.|+++.+||.+..+ .+..++
T Consensus 109 a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~ 188 (764)
T KOG1063|consen 109 ARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELE 188 (764)
T ss_pred eeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEee
Confidence 654 333 478999999984333 122345
Q ss_pred cCCCCCeeEEEEeCCCC---EEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-ccccccCCceeecHhHHh
Q psy2083 110 SGDQTQFNNLCHIPESG---MMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-IIENVYDDYKFVTRQELE 183 (248)
Q Consensus 110 ~~h~~~In~l~~~pdsg---ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-~~~~~yd~y~fvt~~~l~ 183 (248)
+ |...|++++|..-++ +|+++++|..|++|-|-. ...+.++|++ ..++.-+.++|.+-+++.
T Consensus 189 G-H~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~-----------~~~~~~~~~e~~~t~~~~~~~f~~l~~i~ 254 (764)
T KOG1063|consen 189 G-HTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVL-----------GDDEDSNEREDSLTTLSNLPVFMILEEIQ 254 (764)
T ss_pred c-cchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEe-----------cCCccccccccccccccCCceeeeeeeEE
Confidence 5 789999999987555 889999999999998753 2222233333 344556689999988877
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.6e-07 Score=91.61 Aligned_cols=115 Identities=8% Similarity=0.128 Sum_probs=84.1
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE---ecCCCCCCeeEEEEcCCc----eeeeCCC
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV---KDHMYGLPIRDIKFHDNY----VLSMDSS 92 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~---~~h~~~~pI~sI~F~~d~----l~Ssdd~ 92 (248)
.|...|.++.+.|-...|+++++|. ++++||+..++..-. ++|. ..|++++|++.. +.++-|+
T Consensus 98 aH~nAifDl~wapge~~lVsasGDs--------T~r~Wdvk~s~l~G~~~~~GH~--~SvkS~cf~~~n~~vF~tGgRDg 167 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPGESLLVSASGDS--------TIRPWDVKTSRLVGGRLNLGHT--GSVKSECFMPTNPAVFCTGGRDG 167 (720)
T ss_pred cccceeEeeccCCCceeEEEccCCc--------eeeeeeeccceeecceeecccc--cccchhhhccCCCcceeeccCCC
Confidence 3468899999999444477777776 999999999876543 4554 889999999986 3445799
Q ss_pred eEEEEECCCCC--------------------EEEE-------eecCCCCCeeE---EEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 93 VVKIWSKDNGS--------------------LFTC-------IESGDQTQFNN---LCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 93 ~IKIWD~~tGk--------------------~~~t-------ie~~h~~~In~---l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
.|.|||.+-.. +..- ... +...|.+ +.++.|...|++|+. |+.|++||
T Consensus 168 ~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA-~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWD 246 (720)
T KOG0321|consen 168 EILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA-ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWD 246 (720)
T ss_pred cEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc-ccCceeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence 99999987322 0000 001 2445666 667788889999998 99999999
Q ss_pred cCCC
Q psy2083 142 IPSL 145 (248)
Q Consensus 142 Ip~l 145 (248)
|...
T Consensus 247 LRk~ 250 (720)
T KOG0321|consen 247 LRKN 250 (720)
T ss_pred eccc
Confidence 8653
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.9e-07 Score=87.06 Aligned_cols=118 Identities=10% Similarity=0.188 Sum_probs=90.7
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--------CC----c--ee-EEecCCCCCCeeEEE
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--------AD----K--PL-RVKDHMYGLPIRDIK 80 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--------s~----~--pl-~~~~h~~~~pI~sI~ 80 (248)
++..| ...||.+.|+|++..|++++++ |.|.||-.. +. + .+ +...-+|+..|..++
T Consensus 60 ~Ls~H-~~aVN~vRf~p~gelLASg~D~--------g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~ 130 (434)
T KOG1009|consen 60 SLSRH-TRAVNVVRFSPDGELLASGGDG--------GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLA 130 (434)
T ss_pred cccCC-cceeEEEEEcCCcCeeeecCCC--------ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhh
Confidence 34455 6888888888866655555444 489999876 20 1 12 222445568999999
Q ss_pred EcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 81 FHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 81 F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+|++ +.++-|+++++||...|..++.+.. |...++.+|+.|-+..+++=+-|++.+++.+.
T Consensus 131 Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d-h~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~ 195 (434)
T KOG1009|consen 131 WSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD-HEHYVQGVAWDPLNQYVASKSSDRHPEGFSAK 195 (434)
T ss_pred ccCCCceeeeeeccceEEEEEeccceeEeeccc-cccccceeecchhhhhhhhhccCcccceeeee
Confidence 99997 5557899999999999999999888 69999999999999999999999877777543
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=6e-08 Score=92.70 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=88.0
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNG 102 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tG 102 (248)
..++.+||....|++++|+ .|++|||+....+..+ .+|...+.+|..++|+ |-+ +-|++||-||.++|
T Consensus 513 yALa~spDakvcFsccsdG--------nI~vwDLhnq~~Vrqf-qGhtDGascIdis~dGtklWTGGlDntvRcWDlreg 583 (705)
T KOG0639|consen 513 YALAISPDAKVCFSCCSDG--------NIAVWDLHNQTLVRQF-QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREG 583 (705)
T ss_pred hhhhcCCccceeeeeccCC--------cEEEEEcccceeeecc-cCCCCCceeEEecCCCceeecCCCccceeehhhhhh
Confidence 4566778888888888885 8999999987665554 3555889999999998 555 57999999999999
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+.+...+. .+.|-++-.+|++..+++|.+.+.+.+--.
T Consensus 584 rqlqqhdF--~SQIfSLg~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 584 RQLQQHDF--SSQIFSLGYCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred hhhhhhhh--hhhheecccCCCccceeeecccCcEEEEec
Confidence 98877776 688999999999999999999999877543
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=77.77 Aligned_cols=111 Identities=13% Similarity=0.170 Sum_probs=81.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE-cCCc-ee-eeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF-HDNY-VL-SMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F-~~d~-l~-Ssdd~~IKIWD~ 99 (248)
..||..-..|..+.++.+|+|. .+.-||+.+|+-..++ .+|...|.+|.- +.++ |+ ++.|+++||||.
T Consensus 115 PeINam~ldP~enSi~~AgGD~--------~~y~~dlE~G~i~r~~-rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~ 185 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDG--------VIYQVDLEDGRIQREY-RGHTDYVHSVVGRNANGQILSGAEDGTVRVWDT 185 (325)
T ss_pred CccceeEeccCCCcEEEecCCe--------EEEEEEecCCEEEEEE-cCCcceeeeeeecccCcceeecCCCccEEEEec
Confidence 4678888888888888888885 8999999999876664 234489999987 4444 55 468999999999
Q ss_pred CCCCEEEEeecC-CC--------CCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 100 DNGSLFTCIESG-DQ--------TQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 100 ~tGk~~~tie~~-h~--------~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+|++++.+|++- |+ ..| .|+.-|...|+. +..+++.+|-+|+-
T Consensus 186 kt~k~v~~ie~yk~~~~lRp~~g~wi--gala~~edWlvC-GgGp~lslwhLrss 237 (325)
T KOG0649|consen 186 KTQKHVSMIEPYKNPNLLRPDWGKWI--GALAVNEDWLVC-GGGPKLSLWHLRSS 237 (325)
T ss_pred cccceeEEeccccChhhcCcccCcee--EEEeccCceEEe-cCCCceeEEeccCC
Confidence 999999999871 01 123 344445556554 44788999988775
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-07 Score=87.16 Aligned_cols=132 Identities=11% Similarity=0.132 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~ 82 (248)
+|..++++...+-+| -+.||.+.|.|+.-. +++++.|. +||||+|++...+.+++ -+|...|.+|.|+
T Consensus 120 id~~~~~~~~~~~gh-G~sINeik~~p~~~qlvls~SkD~--------svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 120 IDVVSGQCSKNYRGH-GGSINEIKFHPDRPQLVLSASKDH--------SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS 190 (385)
T ss_pred Eecchhhhccceecc-CccchhhhcCCCCCcEEEEecCCc--------eEEEEeccCCeEEEEecccccccCcEEEEEEc
Confidence 566777777776555 478999999998755 45666665 99999999999998873 4556899999999
Q ss_pred CCc--eee-eCCCeEEEEECCCCCEEEEeec---------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 83 DNY--VLS-MDSSVVKIWSKDNGSLFTCIES---------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 83 ~d~--l~S-sdd~~IKIWD~~tGk~~~tie~---------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
.++ ++| +.|.++|+|++..-+....+|- .|...|.|+.|. |.++++=+
T Consensus 191 ~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSks 268 (385)
T KOG1034|consen 191 LDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKS 268 (385)
T ss_pred CCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecc
Confidence 998 665 5899999999984222111110 134445555554 47899988
Q ss_pred CCCeEEEEEcCCCCCC
Q psy2083 133 ENKKILTYYIPSLGPA 148 (248)
Q Consensus 133 ed~~I~~w~Ip~lG~a 148 (248)
-++.|..|---.|+.+
T Consensus 269 cenaI~~w~pgkl~e~ 284 (385)
T KOG1034|consen 269 CENAIVCWKPGKLEES 284 (385)
T ss_pred cCceEEEEecchhhhh
Confidence 8899999963344443
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.5e-06 Score=77.52 Aligned_cols=110 Identities=8% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c---eeEEecCCCCCCeeEEEEcCCc--e-ee-eCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K---PLRVKDHMYGLPIRDIKFHDNY--V-LS-MDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~---pl~~~~h~~~~pI~sI~F~~d~--l-~S-sdd~~I 94 (248)
+....++++|++..+++++..+ |.|.+||+... . ++....+ ......+.|+|++ + ++ ..++.|
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~~p~g~~l~v~~~~~~~v 150 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNA-------NCVSVSPLDKDGIPVAPIQIIEG--LEGCHSANIDPDNRTLWVPCLKEDRI 150 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCC-------CeEEEEEECCCCCCCCceeeccC--CCcccEeEeCCCCCEEEEeeCCCCEE
Confidence 3566888999888888877543 58999999743 2 2222222 1346788999997 3 33 367899
Q ss_pred EEEECCCCCEEE-------EeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 95 KIWSKDNGSLFT-------CIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 95 KIWD~~tGk~~~-------tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
.+||.++...+. .+.. ....+.++|+|||++++++++ +++|.+|++.
T Consensus 151 ~v~d~~~~g~l~~~~~~~~~~~~--g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 151 RLFTLSDDGHLVAQEPAEVTTVE--GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred EEEEECCCCcccccCCCceecCC--CCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 999998743221 2223 345678999999999999998 8999999986
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.9e-07 Score=89.63 Aligned_cols=118 Identities=15% Similarity=0.255 Sum_probs=90.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE-EecCCCCCCeeEEEEcCCc--eee-eCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR-VKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIW 97 (248)
--.|.+++.+|++.++++++-.... .-.-|+||...+=.... ...|. ..|+.++|+||+ ++| |-|+++++|
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~---ehAvI~lw~t~~W~~~~~L~~Hs--LTVT~l~FSpdg~~LLsvsRDRt~sl~ 599 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLK---EHAVIRLWNTANWLQVQELEGHS--LTVTRLAFSPDGRYLLSVSRDRTVSLY 599 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCc---cceEEEEEeccchhhhheecccc--eEEEEEEECCCCcEEEEeecCceEEee
Confidence 3578888888876667776554311 22479999987754444 33455 899999999998 555 689999999
Q ss_pred ECCCCC----EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 98 SKDNGS----LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 98 D~~tGk----~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
....+. .+..+.+ |.--|.++.|+|++..+++|+.|++|++|-+|..
T Consensus 600 ~~~~~~~~e~~fa~~k~-HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 600 EVQEDIKDEFRFACLKA-HTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred eeecccchhhhhccccc-cceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 986532 2445667 6888999999999999999999999999999886
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.3e-07 Score=57.52 Aligned_cols=39 Identities=10% Similarity=0.279 Sum_probs=36.6
Q ss_pred CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 102 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 102 Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++.++++ |..+|++++|+|++.+|++++.|++|++|+
T Consensus 1 g~~~~~~~~-h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRG-HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEES-SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcC-CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 578899998 699999999999999999999999999996
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.5e-07 Score=83.69 Aligned_cols=129 Identities=16% Similarity=0.181 Sum_probs=103.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
..+-....+|++..++.+|..+ .|.|--..++..+...-.. +.|..++|+.++ ++++.++.|-+||+
T Consensus 304 ~~~e~FeVShd~~fia~~G~~G--------~I~lLhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~~~GeV~v~nl 373 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAGNNG--------HIHLLHAKTKELITSFKIE--GVVSDFTFSSDSKELLASGGTGEVYVWNL 373 (514)
T ss_pred chhheeEecCCCCeEEEcccCc--------eEEeehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEcCCceEEEEec
Confidence 3555666678888888888875 8998888777766655433 689999999887 66678889999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC--CCCCCccccccchhhh
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL--GPAPKWCGFLDNLTEE 161 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l--G~aP~wcs~ld~~tee 161 (248)
+..+++..+.......-+++|.++|+.+|++|++.|-|.+|+-.+. +.+|+.--.+||||.-
T Consensus 374 ~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~ 437 (514)
T KOG2055|consen 374 RQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTA 437 (514)
T ss_pred CCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhhee
Confidence 9999999987511334468999999999999999999999995443 7789889999999873
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.3e-07 Score=82.91 Aligned_cols=111 Identities=12% Similarity=0.199 Sum_probs=91.2
Q ss_pred CeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEE
Q psy2083 24 QFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIW 97 (248)
.+.++.|-|. ...++++... |+||+||.|.+ +|+..++.. ..||.++...|++ |..++ .+.+..+
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~--------hqvR~YDt~~qRRPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~g~l~~F 274 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRY--------HQVRLYDTRHQRRPVAQFDFL-ENPISSTGLTPSGNFIYTGNTKGQLAKF 274 (412)
T ss_pred eeccceecCCCCCceEEEEecc--------eeEEEecCcccCcceeEeccc-cCcceeeeecCCCcEEEEecccchhhee
Confidence 3467778775 4445555555 39999999987 899988765 5799999999997 66665 7799999
Q ss_pred ECCCCCEEEE-eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~t-ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.+.|+.... +.+ -...|+++..+|+..++++++-|+-+++|++..
T Consensus 275 D~r~~kl~g~~~kg-~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 275 DLRGGKLLGCGLKG-ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred cccCceeeccccCC-ccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 9999998877 665 367999999999999999999999999999865
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-06 Score=75.56 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=82.3
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
.+.+++.. +....++++|++..+++++..+ +.|..||+.. ++.........+.....|.|+|++ +.++
T Consensus 27 ~~~~~~~~--~~~~~l~~spd~~~lyv~~~~~-------~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~ 97 (330)
T PRK11028 27 LLQVVDVP--GQVQPMVISPDKRHLYVGVRPE-------FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSA 97 (330)
T ss_pred eeeEEecC--CCCccEEECCCCCEEEEEECCC-------CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEE
Confidence 55666543 5677889999888787776543 4899999984 332222222222345689999997 4433
Q ss_pred --CCCeEEEEECCC-CC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 90 --DSSVVKIWSKDN-GS---LFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 90 --dd~~IKIWD~~t-Gk---~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
.++.|.+||.++ |. .+..+.. ......++++|||+.+++++. +++|.+|++..
T Consensus 98 ~~~~~~v~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 98 SYNANCVSVSPLDKDGIPVAPIQIIEG--LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred EcCCCeEEEEEECCCCCCCCceeeccC--CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 488999999974 42 3333333 345677899999999987775 58999999854
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.8e-07 Score=82.74 Aligned_cols=129 Identities=16% Similarity=0.244 Sum_probs=92.4
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEec-CCCCCCeeEEEEcCC--c
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKD-HMYGLPIRDIKFHDN--Y 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~-h~~~~pI~sI~F~~d--~ 85 (248)
.+..+..+.+| .+.|+.++|-+++..+|+++.-+ ..|..||||.. .|+.... |. +..=-.|.|.-+ +
T Consensus 239 ~~~pl~llggh-~gGvThL~~~edGn~lfsGaRk~-------dkIl~WDiR~~~~pv~~L~rhv-~~TNQRI~FDld~~~ 309 (406)
T KOG2919|consen 239 GRRPLQLLGGH-GGGVTHLQWCEDGNKLFSGARKD-------DKILCWDIRYSRDPVYALERHV-GDTNQRILFDLDPKG 309 (406)
T ss_pred CCCceeeeccc-CCCeeeEEeccCcCeecccccCC-------CeEEEEeehhccchhhhhhhhc-cCccceEEEecCCCC
Confidence 45677776655 89999999999988888876643 38999999976 5665442 22 112246888754 3
Q ss_pred --eeee-CCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 86 --VLSM-DSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 86 --l~Ss-dd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
++|+ .|+.|++||.++ |..+..+.+ +...+|.|.++|-=.++++++-+. +|-+|. . ||.++|
T Consensus 310 ~~LasG~tdG~V~vwdlk~~gn~~sv~~~-~sd~vNgvslnP~mpilatssGqr---~f~~~~--------d--D~ge~~ 375 (406)
T KOG2919|consen 310 EILASGDTDGSVRVWDLKDLGNEVSVTGN-YSDTVNGVSLNPIMPILATSSGQR---IFKYPK--------D--DNGELE 375 (406)
T ss_pred ceeeccCCCccEEEEecCCCCCccccccc-ccccccceecCcccceeeeccCce---eecCCC--------c--cccccc
Confidence 6666 599999999998 777777776 588999999999966666666443 444443 1 777766
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.3e-07 Score=78.29 Aligned_cols=124 Identities=6% Similarity=0.078 Sum_probs=89.3
Q ss_pred ceeEEEecCCCCCeeEEEEeC-CCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc---
Q psy2083 12 SLFTCIESGDQTQFNNLCHIP-ESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~-~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--- 85 (248)
++++++.+| +++|..+.+.. .-|. |++++-| |+|-||-=..++-..... ..|...||+|+|-|+.
T Consensus 47 ~ll~~L~Gh-~GPVwqv~wahPk~G~iLAScsYD--------gkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl 117 (299)
T KOG1332|consen 47 KLLAELTGH-SGPVWKVAWAHPKFGTILASCSYD--------GKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGL 117 (299)
T ss_pred eeeeEecCC-CCCeeEEeecccccCcEeeEeecC--------ceEEEEecCCCchhhhhhhhhhcccceeecccccccce
Confidence 577788776 89999999975 3444 4444444 599999988874322221 1334889999999985
Q ss_pred -eee-eCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCC---C-----------CEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLS-MDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPE---S-----------GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pd---s-----------gll~sa~ed~~I~~w~Ip~ 144 (248)
|++ |.|+.|.|.+.++. -....+...|+-.+|++++.|- | ..|++|+-|..|++|....
T Consensus 118 ~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~ 194 (299)
T KOG1332|consen 118 LLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDS 194 (299)
T ss_pred EEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCC
Confidence 444 58999999887753 2333343336889999999986 4 3599999999999997543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.7e-07 Score=91.06 Aligned_cols=115 Identities=6% Similarity=0.140 Sum_probs=95.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee-eeCCCeEEEEEC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL-SMDSSVVKIWSK 99 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~-Ssdd~~IKIWD~ 99 (248)
|.+.+.++.++.+++.++++++|. ++|+|+|.+++.+....-+|...|..+.|+|+.++ .+.|-+.++|+.
T Consensus 174 HeG~iF~i~~s~dg~~i~s~SdDR--------siRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 174 HEGSIFSIVTSLDGRYIASVSDDR--------SIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGV 245 (967)
T ss_pred cCCceEEEEEccCCcEEEEEecCc--------ceeeeecccccccCcccccccceeEEEEeccceeEEeccceEEEEEec
Confidence 479999999999999899998886 99999999986554333445589999999999844 568999999976
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ |+.+..++.|-...|..++..++.-.+.+++.|+.+++|+.-.
T Consensus 246 ~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 246 N-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred c-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 5 8888888873236789999999999999999999999997543
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=9e-07 Score=82.70 Aligned_cols=108 Identities=10% Similarity=0.213 Sum_probs=80.2
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDN 101 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~t 101 (248)
-.++|..+++.++++|.|+ ++|+||.-+-.++.. ..|. ..|+++.|+||+ |++ +.| ..+|||.++
T Consensus 148 k~vaf~~~gs~latgg~dg--------~lRv~~~Ps~~t~l~e~~~~--~eV~DL~FS~dgk~lasig~d-~~~VW~~~~ 216 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDG--------TLRVWEWPSMLTILEEIAHH--AEVKDLDFSPDGKFLASIGAD-SARVWSVNT 216 (398)
T ss_pred eEEEEcCCCCEeeeccccc--------eEEEEecCcchhhhhhHhhc--CccccceeCCCCcEEEEecCC-ceEEEEecc
Confidence 4677888778788888875 999999655544443 4454 799999999998 554 344 899999999
Q ss_pred CCEEEEee-----------------------------cC------------------------CCCCeeEEEEeCCCCEE
Q psy2083 102 GSLFTCIE-----------------------------SG------------------------DQTQFNNLCHIPESGMM 128 (248)
Q Consensus 102 Gk~~~tie-----------------------------~~------------------------h~~~In~l~~~pdsgll 128 (248)
|-+++... ++ ....|.++++++||.++
T Consensus 217 g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~ 296 (398)
T KOG0771|consen 217 GAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFL 296 (398)
T ss_pred CchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEE
Confidence 83333222 10 02368899999999999
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
+.|+.|+.|-+|..-.
T Consensus 297 AlGT~dGsVai~~~~~ 312 (398)
T KOG0771|consen 297 ALGTMDGSVAIYDAKS 312 (398)
T ss_pred EEeccCCcEEEEEece
Confidence 9999999998887544
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.8e-07 Score=85.47 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=93.1
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--------ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--------KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--------~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
++-.| .+.|..+.|.|-.+.+++++.++ +++||.|... +|++++. +|.+||-+|+..+++
T Consensus 289 tl~s~-~d~ir~l~~~~sep~lit~sed~--------~lk~WnLqk~~~s~~~~~epi~tfr-aH~gPVl~v~v~~n~~~ 358 (577)
T KOG0642|consen 289 TLRSH-DDCIRALAFHPSEPVLITASEDG--------TLKLWNLQKAKKSAEKDVEPILTFR-AHEGPVLCVVVPSNGEH 358 (577)
T ss_pred eeecc-hhhhhhhhcCCCCCeEEEecccc--------chhhhhhcccCCccccceeeeEEEe-cccCceEEEEecCCceE
Confidence 33444 57888888888888888888885 9999999321 5777752 344999999999987
Q ss_pred ee-eeCCCeEEEE------ECCCC----CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 86 VL-SMDSSVVKIW------SKDNG----SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 86 l~-Ssdd~~IKIW------D~~tG----k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
+. ++-|++|+.| |..++ ....++.+ |...|..+++++....|++++.|++++.|..-.-.|
T Consensus 359 ~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~G-htdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 359 CYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLG-HTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred EEeeccCceeeeeccCCCCCcccccCcchhccceec-cccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 44 4689999999 44332 23446677 799999999999999999999999999998654333
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.2e-06 Score=86.93 Aligned_cols=125 Identities=11% Similarity=0.156 Sum_probs=88.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
||+++.++-.-+..+ -..+++++|+++|.+++ +|+-+ -...+|+||+.....+..+ +|. ..|++++|+|.
T Consensus 63 fn~~~~tQ~hlvnss-Rk~~t~vAfS~~Gryva-tGEcG-----~~pa~kVw~la~h~vVAEfvdHK--Y~vtcvaFsp~ 133 (1080)
T KOG1408|consen 63 FNVDSCTQSHLVNSS-RKPLTCVAFSQNGRYVA-TGECG-----RTPASKVWSLAFHGVVAEFVDHK--YNVTCVAFSPG 133 (1080)
T ss_pred Ecccccchhheeccc-CcceeEEEEcCCCcEEE-ecccC-----CCccceeeeeccccchhhhhhcc--ccceeeeecCC
Confidence 444444444334443 35788899988666554 44533 2458999999987655554 666 66999999998
Q ss_pred c--eeee---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 85 Y--VLSM---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 85 ~--l~Ss---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. |+|- .|=+|.+||.+..-...+-.- ...|.-+||+.||.++++++ ...|+.||+
T Consensus 134 ~kyvvSVGsQHDMIVnv~dWr~N~~~asnki--ss~Vsav~fsEdgSYfvT~g-nrHvk~wyl 193 (1080)
T KOG1408|consen 134 NKYVVSVGSQHDMIVNVNDWRVNSSGASNKI--SSVVSAVAFSEDGSYFVTSG-NRHVKLWYL 193 (1080)
T ss_pred CcEEEeeccccceEEEhhhhhhccccccccc--ceeEEEEEEccCCceeeeee-eeeEEEEEe
Confidence 7 5542 477999999885544444333 46788899999999998887 789999995
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.7e-06 Score=78.24 Aligned_cols=132 Identities=11% Similarity=0.137 Sum_probs=95.6
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEc
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~ 82 (248)
|-.|.++.+++-+|+..|-.-|.++.|.|.-+.++++++|+ |.|+|||.|.. .|+... ++|...|.+|.|+
T Consensus 196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDd-------gyvriWD~R~tk~pv~el-~~HsHWvW~VRfn 267 (370)
T KOG1007|consen 196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDD-------GYVRIWDTRKTKFPVQEL-PGHSHWVWAVRFN 267 (370)
T ss_pred EEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCC-------ccEEEEeccCCCcccccc-CCCceEEEEEEec
Confidence 33566677777778766667799999999888866666664 49999999987 477665 4556899999999
Q ss_pred CCc---eee-eCCCeEEEEECCCC-----------------------------CEEEEeecCCCCCeeEEEEeCCCC-EE
Q psy2083 83 DNY---VLS-MDSSVVKIWSKDNG-----------------------------SLFTCIESGDQTQFNNLCHIPESG-MM 128 (248)
Q Consensus 83 ~d~---l~S-sdd~~IKIWD~~tG-----------------------------k~~~tie~~h~~~In~l~~~pdsg-ll 128 (248)
|.. |++ +.|..|-+|...+- ..+.+++. |...|-+++|+.-.. ++
T Consensus 268 ~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyde-hEDSVY~~aWSsadPWiF 346 (370)
T KOG1007|consen 268 PEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDE-HEDSVYALAWSSADPWIF 346 (370)
T ss_pred CccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccc-cccceEEEeeccCCCeeE
Confidence 864 444 56777889876431 12334555 688999999987554 55
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
++-+-||+|-+=.+|.
T Consensus 347 ASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 347 ASLSYDGRVIISSVPR 362 (370)
T ss_pred EEeccCceEEeecCCh
Confidence 5668899998877663
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.1e-06 Score=78.62 Aligned_cols=136 Identities=16% Similarity=0.204 Sum_probs=99.4
Q ss_pred cchhcCceeEEEecC-CC---CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc-CCCc--eeE-EecC---CCCC
Q psy2083 6 LRQDKGSLFTCIESG-DQ---TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI-RADK--PLR-VKDH---MYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~-~~---~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl-Rs~~--pl~-~~~h---~~~~ 74 (248)
.|+-+|++-+++.+- |. ....+++|+||+..||++ ... .|+++|+ |.|+ |.. ++.+ +-..
T Consensus 138 wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykr--------cirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 138 WDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKR--------CIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred eeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccc--------eEEEeeccCCCCCCcchhhhhcccccccc
Confidence 466677777775421 12 244689999988777765 443 8999999 7774 222 2222 2224
Q ss_pred CeeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCC
Q psy2083 75 PIRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAP 149 (248)
Q Consensus 75 pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP 149 (248)
-|.+++|+|.. .+.+-.+.+-|+.-..+.++..+-+ |...|+.++|.|||.-|++|.. |.+|..|||..-+ -|
T Consensus 209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llgg-h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~-~p 286 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGG-HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR-DP 286 (406)
T ss_pred eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecc-cCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc-ch
Confidence 67889999975 3445678888998888999999887 7999999999999999999986 6899999997743 34
Q ss_pred Ccc
Q psy2083 150 KWC 152 (248)
Q Consensus 150 ~wc 152 (248)
-|.
T Consensus 287 v~~ 289 (406)
T KOG2919|consen 287 VYA 289 (406)
T ss_pred hhh
Confidence 444
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=5e-06 Score=79.75 Aligned_cols=109 Identities=15% Similarity=0.274 Sum_probs=86.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE---ecCCCCCCeeEEEEcCCc-eeeeC-CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV---KDHMYGLPIRDIKFHDNY-VLSMD-SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~---~~h~~~~pI~sI~F~~d~-l~Ssd-d~~IKIW 97 (248)
..|.-+.|.|-+-.++...+-+ ++..|+.|.+..... +...-..-|.+++|.+++ ++++| ++.|-||
T Consensus 201 e~v~~a~FHPtd~nliit~Gk~--------H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw 272 (626)
T KOG2106|consen 201 EVVFLATFHPTDPNLIITCGKG--------HLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIW 272 (626)
T ss_pred ceEEEEEeccCCCcEEEEeCCc--------eEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEE
Confidence 3566777888777777666664 899999998854332 222223679999999999 88886 7799999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+..+.+....... |+..|-++|.-.+|.+ ++|+.|++|..|+
T Consensus 273 ~~~~~~~~k~~~a-H~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd 314 (626)
T KOG2106|consen 273 SKGTNRISKQVHA-HDGGVFSLCMLRDGTL-LSGGKDRKIILWD 314 (626)
T ss_pred eCCCceEEeEeee-cCCceEEEEEecCccE-eecCccceEEecc
Confidence 9998888777777 7999999999888765 5699999999998
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.6e-06 Score=80.18 Aligned_cols=146 Identities=8% Similarity=0.070 Sum_probs=108.9
Q ss_pred hcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-e
Q psy2083 9 DKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-V 86 (248)
Q Consensus 9 ~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l 86 (248)
..|++-..+. +.|.+.|+.+....+-|.+.++|.|. .|-.|+....+-+...--+ ..-+.+++.+||+ +
T Consensus 88 ~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~--------~v~~~~~~~~~~~~~~~~~-~~~~~sl~is~D~~~ 158 (541)
T KOG4547|consen 88 AGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADL--------KVVYILEKEKVIIRIWKEQ-KPLVSSLCISPDGKI 158 (541)
T ss_pred cCCeEEEEEecCCCCCcceeeecccccCceEecCCce--------eEEEEecccceeeeeeccC-CCccceEEEcCCCCE
Confidence 4566666666 66788999998888888899999886 8999999998766654222 2568899999998 7
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC-----CCEEEEE-eCCCeEEEEEcCC---------CCCCCCc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE-----SGMMFIA-NENKKILTYYIPS---------LGPAPKW 151 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd-----sgll~sa-~ed~~I~~w~Ip~---------lG~aP~w 151 (248)
+....++||+||+++++.+.+|++ |.++|+++.|.-+ |..+++. .-+.-|-+|.+-. =++.|.=
T Consensus 159 l~~as~~ik~~~~~~kevv~~ftg-h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~kkks~~~sl~~~di 237 (541)
T KOG4547|consen 159 LLTASRQIKVLDIETKEVVITFTG-HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDKKKSLSCSLTVPDI 237 (541)
T ss_pred EEeccceEEEEEccCceEEEEecC-CCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccccchhheeeccCCC
Confidence 777788999999999999999998 7999999999877 5444444 4456677887543 1333333
Q ss_pred cccccchhhhhhc
Q psy2083 152 CGFLDNLTEELEE 164 (248)
Q Consensus 152 cs~ld~~tee~e~ 164 (248)
-.+.|..-+|-+.
T Consensus 238 pv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 238 PVTSDSGLLEDGT 250 (541)
T ss_pred CeEeccccccccc
Confidence 4556665555444
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.6e-07 Score=86.66 Aligned_cols=124 Identities=12% Similarity=0.187 Sum_probs=97.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS 88 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S 88 (248)
.|..+.++..+ ..|+.+.|.|-- .|++++++. |-++.-|+.+|+.+.....+. .++..++-+|-. |+.
T Consensus 199 ~GtElHClk~~--~~v~rLeFLPyH-fLL~~~~~~-------G~L~Y~DVS~GklVa~~~t~~-G~~~vm~qNP~NaVih 267 (545)
T KOG1272|consen 199 NGTELHCLKRH--IRVARLEFLPYH-FLLVAASEA-------GFLKYQDVSTGKLVASIRTGA-GRTDVMKQNPYNAVIH 267 (545)
T ss_pred CCcEEeehhhc--Cchhhhcccchh-heeeecccC-------CceEEEeechhhhhHHHHccC-CccchhhcCCccceEE
Confidence 57888888876 689999999954 444444443 489999999997665432221 356666667765 443
Q ss_pred -e-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 -M-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 -s-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ ..++|.+|.+..-+++..+.. |..+|+++++.|+|.++++++-|++|++||+..+
T Consensus 268 ~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~ 325 (545)
T KOG1272|consen 268 LGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNF 325 (545)
T ss_pred EcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccc
Confidence 3 688999999999999999988 6999999999999999999999999999998754
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.9e-05 Score=75.09 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=81.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|...+.+..+ ...+....|+||+..++.++..+ -++.|.+||+.++++.....+. ..+....|+||+ | .
T Consensus 191 g~~~~~lt~~-~~~v~~p~wSpDG~~lay~s~~~-----g~~~i~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~la~ 262 (435)
T PRK05137 191 GANVRYLTDG-SSLVLTPRFSPNRQEITYMSYAN-----GRPRVYLLDLETGQRELVGNFP--GMTFAPRFSPDGRKVVM 262 (435)
T ss_pred CCCcEEEecC-CCCeEeeEECCCCCEEEEEEecC-----CCCEEEEEECCCCcEEEeecCC--CcccCcEECCCCCEEEE
Confidence 4444444443 46788999999888776654432 1358999999998765444333 567789999998 3 3
Q ss_pred ee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEc
Q psy2083 88 SM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYI 142 (248)
Q Consensus 88 Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~I 142 (248)
++ .++ .|-+||..+|+. ..+.. +.....+.+|+|||..|+.+++ ++ +|.+|++
T Consensus 263 ~~~~~g~~~Iy~~d~~~~~~-~~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 263 SLSQGGNTDIYTMDLRSGTT-TRLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred EEecCCCceEEEEECCCCce-EEccC-CCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 43 344 477779987765 44554 2555678999999987777664 34 4555553
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.9e-06 Score=75.93 Aligned_cols=127 Identities=9% Similarity=0.126 Sum_probs=100.4
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~d~-- 85 (248)
++-+.|...+++|.++|.++.|...+..+++++.++ +|-+.|+.+...+.+..|.+ ...|..+.-||..
T Consensus 92 k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~--------~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~ 163 (609)
T KOG4227|consen 92 KTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG--------TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNT 163 (609)
T ss_pred cCCCCceeccCccccceEEEEEccCCeeEecCCCcc--------eeEeeecccceeeeeecccCcccceeecccCCCCce
Confidence 345788899998889999999998888888888875 99999999999888887653 4578888888864
Q ss_pred -eeeeCCCeEEEEECCCCC-EEEEeec-CCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcC
Q psy2083 86 -VLSMDSSVVKIWSKDNGS-LFTCIES-GDQTQFNNLCHIPES-GMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk-~~~tie~-~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip 143 (248)
+++++++.|-|||.+... +..-+.+ +.+....++.|+|.. .+|+++++.+-+.+|++.
T Consensus 164 ~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 164 LIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR 225 (609)
T ss_pred EEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence 566799999999998644 2222221 124677789999965 788999999999999974
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=74.55 Aligned_cols=120 Identities=19% Similarity=0.293 Sum_probs=88.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC----ce--------eEEe-cCCCCCCee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD----KP--------LRVK-DHMYGLPIR 77 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~----~p--------l~~~-~h~~~~pI~ 77 (248)
++-+.+.+-.+.+|.+++|-|-++. ++.++.. -|.+|-.... ++ ..+. +-+| .||+
T Consensus 130 t~pt~Lks~sQrnvtclawRPlsaselavgCr~---------gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVt 199 (445)
T KOG2139|consen 130 TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA---------GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVT 199 (445)
T ss_pred CCCceecchhhcceeEEEeccCCcceeeeeecc---------eeEEEEcCcccccccccccccccchhheeCCCC-ceee
Confidence 4555565555779999999998877 4455555 3899986432 22 2222 2233 7999
Q ss_pred EEEEcCCc--eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++.|.+|+ ++++ +|..|.|||+.+|....-.--+ ...+.-+.|+||+..||+|.-|+...+|..
T Consensus 200 smqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g-lgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 200 SMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKG-LGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred EEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccC-CCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 99999998 4444 6889999999998765544221 567888999999999999999999999943
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-05 Score=82.76 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=98.6
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEc
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~ 82 (248)
+|.+++.+..| ++.|+.++.+++.+-+|++|+++ |+||+||+|.- +.-.++. .-+.++..+.+.
T Consensus 1037 ~G~lVAhL~Eh-s~~v~k~a~s~~~~s~FvsgS~D-------GtVKvW~~~k~~~~~~s~rS~ltys-~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1037 RGILVAHLHEH-SSAVIKLAVSSEHTSLFVSGSDD-------GTVKVWNLRKLEGEGGSARSELTYS-PEGSRVEKVTMC 1107 (1431)
T ss_pred cceEeehhhhc-cccccceeecCCCCceEEEecCC-------ceEEEeeehhhhcCcceeeeeEEEe-ccCCceEEEEec
Confidence 68899998776 78999999999886777666665 59999999863 1223332 234678888887
Q ss_pred CCc---eeeeCCCeEEEEECCC--CCE----------------EEE----------------------------------
Q psy2083 83 DNY---VLSMDSSVVKIWSKDN--GSL----------------FTC---------------------------------- 107 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~t--Gk~----------------~~t---------------------------------- 107 (248)
+.+ ++++.||.|.+.+++- ++. +..
T Consensus 1108 ~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w 1187 (1431)
T KOG1240|consen 1108 GNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW 1187 (1431)
T ss_pred cCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH
Confidence 765 5567888888877653 110 000
Q ss_pred -ee--cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcccccc
Q psy2083 108 -IE--SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 108 -ie--~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
++ + ...-|+++|.+|.+..+++|+..|.+-+||+.-=-|.-+||.--.
T Consensus 1188 ~lk~~~-~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~ 1238 (1431)
T KOG1240|consen 1188 RLKNQL-RHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR 1238 (1431)
T ss_pred hhhcCc-cccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc
Confidence 00 1 135689999999999999999999999999876666777775444
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=1e-05 Score=73.35 Aligned_cols=130 Identities=15% Similarity=0.280 Sum_probs=91.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC--c--EEEeecCceeeeecCCeeEEEEcCC--Cc--e--eE--EecCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG--M--MFIANENKKILTYYIPAFYLYDIRA--DK--P--LR--VKDHMYG 73 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g--~--l~~ag~d~~~~~~~~G~V~LwDlRs--~~--p--l~--~~~h~~~ 73 (248)
++-.+|.....-.-.|.=.++.+-|.|+.. + ++++++| .+|||-+-. ++ + +. .+...|.
T Consensus 80 ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D---------~LRlWri~~ee~~~~~~~~L~~~kns~~~ 150 (364)
T KOG0290|consen 80 LDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD---------FLRLWRIGDEESRVELQSVLNNNKNSEFC 150 (364)
T ss_pred EccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC---------eEEEEeccCcCCceehhhhhccCcccccC
Confidence 444455544332111246788999998763 1 4455555 699999873 21 1 11 1334556
Q ss_pred CCeeEEEEcCCc----eeeeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCC
Q psy2083 74 LPIRDIKFHDNY----VLSMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 74 ~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~l 145 (248)
.|+++-.|+.-. .+||-|-++-|||+++|. ..+.+-. |..+|-+++|..+| +++++.+.||.+++||+..|
T Consensus 151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIA-HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIA-HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEe-cCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 899999988543 455679999999999873 3566777 69999999999977 78889999999999998775
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.6e-05 Score=74.27 Aligned_cols=114 Identities=7% Similarity=0.069 Sum_probs=76.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-e-eCCC--eEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-S-MDSS--VVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-S-sdd~--~IK 95 (248)
...+.+.+|+||+..++.++..+ ....|.+||+.++++....... ..+..+.|+||+ |+ + +.++ .|.
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~-----g~~~i~i~dl~~G~~~~l~~~~--~~~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecC-----CCcEEEEEECCCCCeEEccCCC--CCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 35788999999887776544321 1247999999998664433222 334578999998 33 3 2233 588
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+||.++|+... +.. +...+.+.+|+|||..|+.+++ ++...+|.++.
T Consensus 271 ~~d~~tg~~~~-lt~-~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~ 318 (429)
T PRK03629 271 VMDLASGQIRQ-VTD-GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNI 318 (429)
T ss_pred EEECCCCCEEE-ccC-CCCCcCceEECCCCCEEEEEeCCCCCceEEEEEC
Confidence 99999887644 443 2567788999999997766665 45667776543
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.6e-05 Score=75.57 Aligned_cols=124 Identities=10% Similarity=0.129 Sum_probs=80.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|...+.+-.+ ...+.+.+|+||+..++.++..+ ....|.+||++++++....... ..+....|+||+ | +
T Consensus 185 G~~~~~l~~~-~~~v~~p~wSPDG~~la~~s~~~-----~~~~I~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~la~ 256 (427)
T PRK02889 185 GQNAQSALSS-PEPIISPAWSPDGTKLAYVSFES-----KKPVVYVHDLATGRRRVVANFK--GSNSAPAWSPDGRTLAV 256 (427)
T ss_pred CCCceEeccC-CCCcccceEcCCCCEEEEEEccC-----CCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEEEE
Confidence 4433333333 46788899999887776655432 1247999999998765443222 345689999997 3 3
Q ss_pred e-eCCCeEEEEEC--CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 88 S-MDSSVVKIWSK--DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 88 S-sdd~~IKIWD~--~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ +.++...||.. .++ ....+.. +.....+.+|+|||..|+..++ ++...+|.++.
T Consensus 257 ~~~~~g~~~Iy~~d~~~~-~~~~lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~ 315 (427)
T PRK02889 257 ALSRDGNSQIYTVNADGS-GLRRLTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA 315 (427)
T ss_pred EEccCCCceEEEEECCCC-CcEECCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC
Confidence 3 45777677654 444 3556655 2445567899999987776654 46777777653
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.7e-06 Score=80.43 Aligned_cols=113 Identities=15% Similarity=0.287 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----------------------------ceeEEecCCCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----------------------------KPLRVKDHMYGL 74 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----------------------------~pl~~~~h~~~~ 74 (248)
..|+.+.+-|.+..+|.+.-.. |...+||..-. .|+...... ..
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~s-------Gnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~-~g 291 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHAS-------GNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIG-EG 291 (636)
T ss_pred cceEEEEEEeCCCceEEEEEec-------CceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEec-cc
Confidence 4677777777666666554433 57888865321 111111111 24
Q ss_pred CeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 75 PIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 75 pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|+..+|+||+ +++ +.|+.+||+|-.+-+++..+.. .-..+.||||+|||.+|++|+||--|.+|..+.
T Consensus 292 ~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS-YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~e 363 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS-YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEE 363 (636)
T ss_pred cccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh-hccceEEEEEcCCccEEEecCCcceEEEEEecc
Confidence 78899999998 555 6899999999998777766654 235799999999999999999999999998754
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.4e-06 Score=78.54 Aligned_cols=122 Identities=15% Similarity=0.305 Sum_probs=87.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---cee-EEecCCCCCCeeEEEEcCCc---e
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPL-RVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl-~~~~h~~~~pI~sI~F~~d~---l 86 (248)
++.+...|.+.|+.++|.|.+-.++.+|+-+ |-|-|||+... .+| .+..| +..|.+|.|+.++ |
T Consensus 157 l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD-------GLvnlfD~~~d~EeDaL~~viN~--~sSI~~igw~~~~ykrI 227 (376)
T KOG1188|consen 157 LRQLNESHNDDVTQLRFHPSDPNLLLSGSVD-------GLVNLFDTKKDNEEDALLHVINH--GSSIHLIGWLSKKYKRI 227 (376)
T ss_pred hhhhhhhccCcceeEEecCCCCCeEEeeccc-------ceEEeeecCCCcchhhHHHhhcc--cceeeeeeeecCCcceE
Confidence 5554444479999999999877755544443 59999999876 233 33444 4789999999876 5
Q ss_pred ee-eCCCeEEEEECCCCCEEEEee--------------------------------------------------------
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFTCIE-------------------------------------------------------- 109 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~tie-------------------------------------------------------- 109 (248)
.+ +...+.++|+.+.|.+.+.++
T Consensus 228 ~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~ 307 (376)
T KOG1188|consen 228 MCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTE 307 (376)
T ss_pred EEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCc
Confidence 55 467888999988776644432
Q ss_pred -----cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 110 -----SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 110 -----~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|..-|++++|...+.++++|+||+.+.+|-.+.
T Consensus 308 ~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~d 347 (376)
T KOG1188|consen 308 PAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVED 347 (376)
T ss_pred cccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecCC
Confidence 12334466677777778999999999999998654
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2e-05 Score=74.95 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=70.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
...+....|+||+..++.+++.+ |...||++... .......+. . ..+.|+|++ |+ ++.++++ +|
T Consensus 291 ~~~~~~~~wSpDG~~i~f~s~~~-------g~~~I~~~~~~~~~~~~l~~~--~--~~~~~SpDG~~ia~~~~~~i~-~~ 358 (429)
T PRK01742 291 AGNNTEPSWSPDGQSILFTSDRS-------GSPQVYRMSASGGGASLVGGR--G--YSAQISADGKTLVMINGDNVV-KQ 358 (429)
T ss_pred CCCcCCEEECCCCCEEEEEECCC-------CCceEEEEECCCCCeEEecCC--C--CCccCCCCCCEEEEEcCCCEE-EE
Confidence 35677899999887766555433 47888887543 222222332 2 457899997 43 4456555 59
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|..+|+... +.. .....++.|+|||.+|+.++.++.+.+|++
T Consensus 359 Dl~~g~~~~-lt~--~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 359 DLTSGSTEV-LSS--TFLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred ECCCCCeEE-ecC--CCCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 999987643 322 223456789999999999999988887774
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.2e-06 Score=80.14 Aligned_cols=128 Identities=14% Similarity=0.233 Sum_probs=92.8
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-------CCC---CC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-------HMY---GL 74 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-------h~~---~~ 74 (248)
.||..+|+.+..++.. .+.+|.|...+..|++++|+.++ .|-.||.|...-+.+.+ |.. ..
T Consensus 159 RlNLEqGrfL~P~~~~-~~~lN~v~in~~hgLla~Gt~~g--------~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~ 229 (703)
T KOG2321|consen 159 RLNLEQGRFLNPFETD-SGELNVVSINEEHGLLACGTEDG--------VVEFWDPRDKSRVGTLDAASSVNSHPGGDAAP 229 (703)
T ss_pred EEEccccccccccccc-cccceeeeecCccceEEecccCc--------eEEEecchhhhhheeeecccccCCCccccccC
Confidence 3788899999998875 57899998899888766665564 89999999874333221 111 12
Q ss_pred CeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCE-EEEEeCCCeEEEEE
Q psy2083 75 PIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYY 141 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgl-l~sa~ed~~I~~w~ 141 (248)
.|++|+|..++ .++...|.|-|+|+++.+++-.=..+...+|..+.|.+.++. -++..+...+++|+
T Consensus 230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd 300 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWD 300 (703)
T ss_pred cceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcc
Confidence 49999999987 445678899999999998875543223579999999886433 33444557789997
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=77.02 Aligned_cols=117 Identities=16% Similarity=0.212 Sum_probs=82.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-----eeEEecCCCCCCeeEEEEcCCc---
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-----PLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
...++. ++.|..++|.|.+..++++|... |+|.+||+|.+. ++....|.|..||+.+.|..+.
T Consensus 236 e~~~~~--~s~v~~~~f~p~~p~ll~gG~y~-------GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~ 306 (555)
T KOG1587|consen 236 ELVLES--PSEVTCLKFCPFDPNLLAGGCYN-------GQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNT 306 (555)
T ss_pred eEEEec--CCceeEEEeccCCcceEEeeccC-------ceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCC
Confidence 334444 47899999999999988888775 699999999872 2445678888999999997653
Q ss_pred --eeeeCCCeEEEEECCCCCE------EEEee-----cCCCCCeeEEEEeC-CCCEEEEEeCCCeEEE
Q psy2083 86 --VLSMDSSVVKIWSKDNGSL------FTCIE-----SGDQTQFNNLCHIP-ESGMMFIANENKKILT 139 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~------~~tie-----~~h~~~In~l~~~p-dsgll~sa~ed~~I~~ 139 (248)
+.++.|+.|+.|+++.-.. ..... ......++++.|.| +-..+++|++.|.|..
T Consensus 307 ~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~ 374 (555)
T KOG1587|consen 307 EFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK 374 (555)
T ss_pred ceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE
Confidence 4456799999999874221 11111 01134677888876 3366777788887765
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00011 Score=69.12 Aligned_cols=128 Identities=13% Similarity=0.190 Sum_probs=85.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+.+.+..++.+. ..-..++|+||+.++++++.|+ .|.++|+.+.+.+....-+ ..-.++++++|+
T Consensus 21 iD~~t~~~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg--------~vsviD~~~~~~v~~i~~G--~~~~~i~~s~DG 89 (369)
T PF02239_consen 21 IDGATNKVVARIPTGG-APHAGLKFSPDGRYLYVANRDG--------TVSVIDLATGKVVATIKVG--GNPRGIAVSPDG 89 (369)
T ss_dssp EETTT-SEEEEEE-ST-TEEEEEE-TT-SSEEEEEETTS--------EEEEEETTSSSEEEEEE-S--SEEEEEEE--TT
T ss_pred EECCCCeEEEEEcCCC-CceeEEEecCCCCEEEEEcCCC--------eEEEEECCcccEEEEEecC--CCcceEEEcCCC
Confidence 6788899999999762 2234567788888888887764 8999999999977665444 456889999998
Q ss_pred --ee-ee-CCCeEEEEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 86 --VL-SM-DSSVVKIWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ss-dd~~IKIWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
++ ++ ..+.+.|+|.++.+++.++..+ ....+..+..+|....++++. +.++|.+-+...
T Consensus 90 ~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d 159 (369)
T PF02239_consen 90 KYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD 159 (369)
T ss_dssp TEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc
Confidence 44 33 6899999999999999998751 023456677788888666555 458777666444
|
... |
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.2e-05 Score=80.79 Aligned_cols=113 Identities=16% Similarity=0.164 Sum_probs=78.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEE-ecCCCCCCeeEEEEcCCc---ee-eeCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRV-KDHMYGLPIRDIKFHDNY---VL-SMDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~-~~h~~~~pI~sI~F~~d~---l~-Ssdd~~I 94 (248)
..|+.+...-..|.++++|-. ||.|++||.|...| +.. +.|.-..||..+.+.+.+ ++ +|.+|.|
T Consensus 1209 t~vTaLS~~~~~gn~i~AGfa-------DGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFA-------DGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDI 1281 (1387)
T ss_pred ccceeecccccCCceEEEeec-------CCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeE
Confidence 344554444444555555444 46999999998744 333 567644569999999876 44 4689999
Q ss_pred EEEECCCCC--EEEEeecCC--CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 95 KIWSKDNGS--LFTCIESGD--QTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 95 KIWD~~tGk--~~~tie~~h--~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++||++... .+-++..+- .+.++++.++++..++++|+. +.|++|+..
T Consensus 1282 ~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1282 QLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred EEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence 999999632 222222210 135999999999999999998 999999864
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.2e-06 Score=81.23 Aligned_cols=113 Identities=9% Similarity=0.115 Sum_probs=88.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKI 96 (248)
-+.|+.+.++|-+-.+|.+++|- +|+||.-- ...|+..++.. -..|.+++|+|.- .++. ++|.|-|
T Consensus 398 ~g~v~~v~~nPF~~k~fls~gDW--------~vriWs~~~~~~Pl~~~~~~-~~~v~~vaWSptrpavF~~~d~~G~l~i 468 (555)
T KOG1587|consen 398 IGPVYAVSRNPFYPKNFLSVGDW--------TVRIWSEDVIASPLLSLDSS-PDYVTDVAWSPTRPAVFATVDGDGNLDI 468 (555)
T ss_pred CcceEeeecCCCccceeeeeccc--------eeEeccccCCCCcchhhhhc-cceeeeeEEcCcCceEEEEEcCCCceeh
Confidence 57899999999877788777775 89999988 56888776432 2569999999986 4444 5999999
Q ss_pred EECCC--CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 97 WSKDN--GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 97 WD~~t--Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.. -++..+... +....+.+.++++|.+|++|.+.|++++|.++.
T Consensus 469 WDLl~~~~~Pv~s~~~-~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 469 WDLLQDDEEPVLSQKV-CSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred hhhhccccCCcccccc-cccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 99874 456666655 245667788888899999999999999999963
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.5e-06 Score=76.00 Aligned_cols=123 Identities=14% Similarity=0.172 Sum_probs=86.4
Q ss_pred cCceeEEEecCCCC------CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----ceeEEecCCCCCCeeE
Q psy2083 10 KGSLFTCIESGDQT------QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPLRVKDHMYGLPIRD 78 (248)
Q Consensus 10 ~G~~~~~~~~~~~~------~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~~~~h~~~~pI~s 78 (248)
.+..++..+++|+. .|-...|...+.+++.++.+ |.|..+|+|.+ -|.+...|+ ..|++
T Consensus 234 qqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRn--------geI~~iDLR~rnqG~~~~a~rlyh~--Ssvts 303 (425)
T KOG2695|consen 234 QQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRN--------GEIFVIDLRCRNQGNGWCAQRLYHD--SSVTS 303 (425)
T ss_pred ceeEEEEeecccccccccchhHHHHHhcccCCeeEecccC--------CcEEEEEeeecccCCCcceEEEEcC--cchhh
Confidence 34466666666533 45555555544456666666 49999999986 355666676 78888
Q ss_pred EEEc---CCc-eeeeCCCeEEEEECCCCCE---EEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 79 IKFH---DNY-VLSMDSSVVKIWSKDNGSL---FTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 79 I~F~---~d~-l~Ssdd~~IKIWD~~tGk~---~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.-. ... ++|+.++.||+||.+--++ +.++++ |.. .-+-+.+.|..|.|+++++|.-.++|-+.
T Consensus 304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG-HvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG-HVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred hhhhccccceEeeccCcCceeEeeehhhhcccceeeeec-ccccccccccccccccceEEEccCeeEEEEEecc
Confidence 7644 344 5555699999999987666 889998 332 22335567888999999999999999876
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.9e-06 Score=86.56 Aligned_cols=106 Identities=9% Similarity=0.271 Sum_probs=84.6
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKI 96 (248)
-..|.+++|.. +|. ++++++|- .||+|-+.+...+.. .+|. ..|++++.+.+. +++ |.|.+|++
T Consensus 190 ~naVyca~fDr-tg~~Iitgsdd~--------lvKiwS~et~~~lAs~rGhs--~ditdlavs~~n~~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 190 RNAVYCAIFDR-TGRYIITGSDDR--------LVKIWSMETARCLASCRGHS--GDITDLAVSSNNTMIAAASNDKVIRV 258 (1113)
T ss_pred hhheeeeeecc-ccceEeecCccc--------eeeeeeccchhhhccCCCCc--cccchhccchhhhhhhhcccCceEEE
Confidence 45666666555 555 55555554 899999999887765 4555 889999988776 444 68999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|-+.+|.++..+.+ |...|+.++|+|-- +.++|+++.+|+..
T Consensus 259 Wrl~~~~pvsvLrg-htgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 259 WRLPDGAPVSVLRG-HTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred EecCCCchHHHHhc-cccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999999998 79999999999965 67889999999854
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.8e-06 Score=82.23 Aligned_cols=121 Identities=11% Similarity=0.121 Sum_probs=94.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|...|.+++++.+| .+.|++++++.+|...+++++|. .|-+|.-.-. -+..+.|+ ..|.+..|+|-.
T Consensus 38 yD~ndG~llqtLKgH-KDtVycVAys~dGkrFASG~aDK--------~VI~W~~klE-G~LkYSH~--D~IQCMsFNP~~ 105 (1081)
T KOG1538|consen 38 YDTSDGTLLQPLKGH-KDTVYCVAYAKDGKRFASGSADK--------SVIIWTSKLE-GILKYSHN--DAIQCMSFNPIT 105 (1081)
T ss_pred EeCCCcccccccccc-cceEEEEEEccCCceeccCCCce--------eEEEeccccc-ceeeeccC--CeeeEeecCchH
Confidence 678889999999987 89999999999766555555565 8999976543 24556666 899999999976
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++|+.-.-.-+|.++ .+.+..... .+.+++++|..||.+++.|.-+|+|.+-.
T Consensus 106 h~LasCsLsdFglWS~~-qK~V~K~ks--s~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 106 HQLASCSLSDFGLWSPE-QKSVSKHKS--SSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred HHhhhcchhhccccChh-hhhHHhhhh--heeEEEeeecCCCcEEEEeccCceEEeec
Confidence 666654455699987 345555555 67899999999999999999999997763
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.9e-06 Score=79.40 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=87.3
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+|+.-.+++.| .+.|.+-.++|||.-|+++|+|+ .|++|- |+|. +...--+++.+|.+++|.|+. |+
T Consensus 93 ~~rVE~sv~AH-~~A~~~gRW~~dGtgLlt~GEDG--------~iKiWS-rsGM-LRStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 93 SARVERSISAH-AAAISSGRWSPDGAGLLTAGEDG--------VIKIWS-RSGM-LRSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred cchhhhhhhhh-hhhhhhcccCCCCceeeeecCCc--------eEEEEe-ccch-HHHHHhhcCceeEEEEECCCCCceE
Confidence 45555666666 68888888999887799999985 899996 4442 221112445899999999997 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
=+..+.+-|=-+.-....-.+.. |..-|-++.|+|.+.+|++|+||-+.++||-
T Consensus 162 ~c~g~h~~IKpL~~n~k~i~WkA-HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 162 FCQGGHISIKPLAANSKIIRWRA-HDGLVLSLSWSTQSNIIASGGEDFRFKIWDA 215 (737)
T ss_pred EecCCeEEEeecccccceeEEec-cCcEEEEeecCccccceeecCCceeEEeecc
Confidence 44333333433333333445667 6888999999999999999999999999984
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.1e-05 Score=71.62 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=79.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|.....+-.+ ...+.+..|+||+..++.++..+ ....|.+||+.++++....... ....+..|+||+ | +
T Consensus 193 g~~~~~lt~~-~~~v~~p~wSpDg~~la~~s~~~-----~~~~l~~~dl~~g~~~~l~~~~--g~~~~~~~SpDG~~l~~ 264 (433)
T PRK04922 193 GYNPQTILRS-AEPILSPAWSPDGKKLAYVSFER-----GRSAIYVQDLATGQRELVASFR--GINGAPSFSPDGRRLAL 264 (433)
T ss_pred CCCceEeecC-CCccccccCCCCCCEEEEEecCC-----CCcEEEEEECCCCCEEEeccCC--CCccCceECCCCCEEEE
Confidence 4433344333 35678889999888777665432 1347999999988765443332 344578999998 3 3
Q ss_pred e-eCC--CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 88 S-MDS--SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 88 S-sdd--~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
+ +.+ ..|.+||..+|+. ..+.. +.....+.+|+|||..|+.+++ ++...+|.+.
T Consensus 265 ~~s~~g~~~Iy~~d~~~g~~-~~lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 265 TLSRDGNPEIYVMDLGSRQL-TRLTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred EEeCCCCceEEEEECCCCCe-EECcc-CCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 3 333 3699999998875 44554 2444567899999987776664 4555555443
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=77.33 Aligned_cols=118 Identities=9% Similarity=0.222 Sum_probs=90.7
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E-ecCCCC------------------
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V-KDHMYG------------------ 73 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~-~~h~~~------------------ 73 (248)
.++.+| .+.|+.+.+++....|+++++|+ ||++|+.-...|.. . +.|++-
T Consensus 390 ~~l~Gh-tdavw~l~~s~~~~~Llscs~Dg--------Tvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~ 460 (577)
T KOG0642|consen 390 GTLLGH-TDAVWLLALSSTKDRLLSCSSDG--------TVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFR 460 (577)
T ss_pred cceecc-ccceeeeeecccccceeeecCCc--------eEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcc
Confidence 345555 78899999988766687877774 99999988776611 1 122210
Q ss_pred -----------------------------CCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE
Q psy2083 74 -----------------------------LPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH 121 (248)
Q Consensus 74 -----------------------------~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~ 121 (248)
.-|+.|..+|.. .++ -.++.||+.|-.+|+++..... |...++++++
T Consensus 461 ~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a-~~~svtslai 539 (577)
T KOG0642|consen 461 FGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVA-HKDSVTSLAI 539 (577)
T ss_pred cccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheee-ccceecceee
Confidence 125556666665 334 4799999999999999999998 6899999999
Q ss_pred eCCCCEEEEEeCCCeEEEEEc
Q psy2083 122 IPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~I 142 (248)
.|+|..|++++-|+.+.+|-+
T Consensus 540 ~~ng~~l~s~s~d~sv~l~kl 560 (577)
T KOG0642|consen 540 DPNGPYLMSGSHDGSVRLWKL 560 (577)
T ss_pred cCCCceEEeecCCceeehhhc
Confidence 999999999999999999964
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=71.54 Aligned_cols=104 Identities=12% Similarity=0.232 Sum_probs=76.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..|++..+.+|++.+++++-++. .|.|||..++ .|+.-+.- ..+.-+.|+||+ +. +.-|++.++|
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gss-------si~iWdpdtg~~~pL~~~gl---gg~slLkwSPdgd~lfaAt~davfrlw 265 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSS-------SIMIWDPDTGQKIPLIPKGL---GGFSLLKWSPDGDVLFAATCDAVFRLW 265 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcc-------eEEEEcCCCCCcccccccCC---CceeeEEEcCCCCEEEEecccceeeee
Confidence 68999999999888888877653 8999999988 45554432 468899999998 44 4579999999
Q ss_pred ECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEE
Q psy2083 98 SKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKIL 138 (248)
Q Consensus 98 D~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~ 138 (248)
+.. +-....-+.+ +..|...|++|+|..|+.++. ...+.
T Consensus 266 ~e~q~wt~erw~lg--sgrvqtacWspcGsfLLf~~sgsp~ly 306 (445)
T KOG2139|consen 266 QENQSWTKERWILG--SGRVQTACWSPCGSFLLFACSGSPRLY 306 (445)
T ss_pred hhcccceecceecc--CCceeeeeecCCCCEEEEEEcCCceEE
Confidence 654 3333333444 569999999999977666654 44544
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.1e-05 Score=69.20 Aligned_cols=121 Identities=12% Similarity=0.257 Sum_probs=82.7
Q ss_pred eeEEEecCCCCCeeEEEEeCC-CCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE--ecC----------CCCCCeeE
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE-SGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV--KDH----------MYGLPIRD 78 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~-~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h----------~~~~pI~s 78 (248)
..+++-.. .+.|.+++|.|. -|+ +++++.| |++|||+.=.+-.+.. ..| .+..+--+
T Consensus 104 ~~ttl~Ds-rssV~DV~FaP~hlGLklA~~~aD--------G~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~C 174 (361)
T KOG2445|consen 104 RRTTLVDS-RSSVTDVKFAPKHLGLKLAAASAD--------GILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFC 174 (361)
T ss_pred EEEEeecC-CcceeEEEecchhcceEEEEeccC--------cEEEEEecCCccccccchhhhhhhhccCCcccccCcceE
Confidence 34555444 578999999985 234 4455555 4999999866533221 111 23467889
Q ss_pred EEEcCCc------eeeeCC-----CeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCCCC----EEEEEeCCCeEEE
Q psy2083 79 IKFHDNY------VLSMDS-----SVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPESG----MMFIANENKKILT 139 (248)
Q Consensus 79 I~F~~d~------l~Ssdd-----~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pdsg----ll~sa~ed~~I~~ 139 (248)
|.|++.- ++++++ +.++||....+. .+.++.. |..+|++++|.|+-| +|++|+-|| |++
T Consensus 175 vsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d-~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I 252 (361)
T KOG2445|consen 175 VSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD-HTDPIRDISWAPNIGRSYHLLAVATKDG-VRI 252 (361)
T ss_pred EeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC-CCCcceeeeeccccCCceeeEEEeecCc-EEE
Confidence 9998763 444544 478899876532 2334444 789999999999775 799999999 999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|-|..
T Consensus 253 ~~v~~ 257 (361)
T KOG2445|consen 253 FKVKV 257 (361)
T ss_pred EEEee
Confidence 98753
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.1e-06 Score=88.31 Aligned_cols=126 Identities=10% Similarity=0.148 Sum_probs=89.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCce
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYV 86 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l 86 (248)
.+.++.++++.-+| ++.++..+.+..+-++++++.|. .|++|-++.+.|+.+. .+|.+.|++|+|+|-.
T Consensus 218 S~et~~~lAs~rGh-s~ditdlavs~~n~~iaaaS~D~--------vIrvWrl~~~~pvsvL-rghtgavtaiafsP~~- 286 (1113)
T KOG0644|consen 218 SMETARCLASCRGH-SGDITDLAVSSNNTMIAAASNDK--------VIRVWRLPDGAPVSVL-RGHTGAVTAIAFSPRA- 286 (1113)
T ss_pred eccchhhhccCCCC-ccccchhccchhhhhhhhcccCc--------eEEEEecCCCchHHHH-hccccceeeeccCccc-
Confidence 35678888887776 79999999998776666666665 7999999999998774 2445999999999965
Q ss_pred eeeCCCeEEEEECCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|++|++++|||.+ -.+.... .+....-+-++-|..++.-++++++|+.-..|-++.
T Consensus 287 sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~ 347 (1113)
T KOG0644|consen 287 SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQ 347 (1113)
T ss_pred cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhH
Confidence 66899999999998 1111111 000012334455556666777777777777776654
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.1e-05 Score=50.38 Aligned_cols=39 Identities=10% Similarity=0.325 Sum_probs=33.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD 58 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD 58 (248)
|+++.++.+| ++.|+++++.|++..+++++.|+ +|++||
T Consensus 1 g~~~~~~~~h-~~~i~~i~~~~~~~~~~s~~~D~--------~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGH-SSSINSIAWSPDGNFLASGSSDG--------TIRVWD 39 (39)
T ss_dssp EEEEEEEESS-SSSEEEEEEETTSSEEEEEETTS--------EEEEEE
T ss_pred CeEEEEEcCC-CCcEEEEEEecccccceeeCCCC--------EEEEEC
Confidence 5678888887 79999999999987788888775 999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.9e-05 Score=71.97 Aligned_cols=164 Identities=9% Similarity=0.128 Sum_probs=102.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc---
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~--- 85 (248)
+.+.++... .....+.|+-.... +.++.-.-..-|...-.-.+|++-.++. +.+..-....+|.+++++|+.
T Consensus 197 EvL~yirTE--~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kL 274 (545)
T PF11768_consen 197 EVLSYIRTE--NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKL 274 (545)
T ss_pred EEEEEEEec--CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceE
Confidence 466666664 45578888754444 4444211000011122456788766543 333222334789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN 165 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~ 165 (248)
++++.|+.|.+||...+....+ .. .-.++.++|+|+|.++++|++.|.+++||+. |+|.+ +..+.||..
T Consensus 275 vlGC~DgSiiLyD~~~~~t~~~-ka--~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A-Lspi~-----~qLlsEd~~-- 343 (545)
T PF11768_consen 275 VLGCEDGSIILYDTTRGVTLLA-KA--EFIPTLIAWHPDGAIFVVGSEQGELQCFDMA-LSPIK-----MQLLSEDAT-- 343 (545)
T ss_pred EEEecCCeEEEEEcCCCeeeee-ee--cccceEEEEcCCCcEEEEEcCCceEEEEEee-cCccc-----eeeccccCC--
Confidence 8889999999999987643322 33 5678899999999999999999999999974 34432 555556444
Q ss_pred ccccccCCceeecHhHHhhcCCc
Q psy2083 166 IIENVYDDYKFVTRQELEDLGLG 188 (248)
Q Consensus 166 ~~~~~yd~y~fvt~~~l~~l~~~ 188 (248)
+..++-=.-.|.+...|..+.-.
T Consensus 344 P~~~L~Ls~yf~~~~~L~~iqW~ 366 (545)
T PF11768_consen 344 PKSTLQLSKYFRVSSSLVHIQWA 366 (545)
T ss_pred CccEEeeehhccCcchhheeEec
Confidence 22222222335666666665443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.5e-05 Score=72.25 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=84.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCC----------------------------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMY---------------------------- 72 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~---------------------------- 72 (248)
.+.|.++.|+||+..|++.|.+ ..++||++++.++..+. ..-
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d---------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~ 256 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD---------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGG 256 (398)
T ss_pred cCccccceeCCCCcEEEEecCC---------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCC
Confidence 3899999999998889988888 48999999984443332 000
Q ss_pred ------------------------CCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 73 ------------------------GLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 73 ------------------------~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
...|.+++.++++ .+++.++.|-|++..+=+.+.-+.--|..-|+.+.|+||+
T Consensus 257 ~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds 336 (398)
T KOG0771|consen 257 GVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS 336 (398)
T ss_pred ceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCc
Confidence 0145556666666 4456788888888876665555442268899999999999
Q ss_pred CEEEEEeCCCeEEEEEcCC
Q psy2083 126 GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~ 144 (248)
+.+++-+.+.++.+.-|+.
T Consensus 337 r~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 337 RYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CcccccccCCceeEEEEee
Confidence 9999999898888887765
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00012 Score=71.76 Aligned_cols=114 Identities=9% Similarity=0.171 Sum_probs=77.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDS 91 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd 91 (248)
.+-+ |.+.|.++...|.+.+|++|+.| |+||||.|++++++.+.... ..|.+|+|+|.. |+.+..
T Consensus 395 vyrG-Htg~Vr~iSvdp~G~wlasGsdD--------GtvriWEi~TgRcvr~~~~d--~~I~~vaw~P~~~~~vLAvA~~ 463 (733)
T KOG0650|consen 395 VYRG-HTGLVRSISVDPSGEWLASGSDD--------GTVRIWEIATGRCVRTVQFD--SEIRSVAWNPLSDLCVLAVAVG 463 (733)
T ss_pred eEec-cCCeEEEEEecCCcceeeecCCC--------CcEEEEEeecceEEEEEeec--ceeEEEEecCCCCceeEEEEec
Confidence 3444 48999999988866556665555 49999999999999876544 789999999974 333333
Q ss_pred CeEE---------------------------------EEECCC-----CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 92 SVVK---------------------------------IWSKDN-----GSLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 92 ~~IK---------------------------------IWD~~t-----Gk~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
..+- .|.... +..-.+|. |..+|++|.|+-.|.+|++.+-
T Consensus 464 ~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~--~~k~i~~vtWHrkGDYlatV~~ 541 (733)
T KOG0650|consen 464 ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIK--HPKSIRQVTWHRKGDYLATVMP 541 (733)
T ss_pred CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEe--cCCccceeeeecCCceEEEecc
Confidence 3333 443331 00111222 4789999999999999999876
Q ss_pred CC---eEEEEEc
Q psy2083 134 NK---KILTYYI 142 (248)
Q Consensus 134 d~---~I~~w~I 142 (248)
++ .|.++.+
T Consensus 542 ~~~~~~VliHQL 553 (733)
T KOG0650|consen 542 DSGNKSVLIHQL 553 (733)
T ss_pred CCCcceEEEEec
Confidence 53 4555544
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00011 Score=68.95 Aligned_cols=91 Identities=14% Similarity=0.168 Sum_probs=68.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM 128 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll 128 (248)
|+|.+.|..+.+.+.....+. .+-..+.|+||+ .+++.|+.|.++|+.+++.+.++.. .....+++++|||.++
T Consensus 16 ~~v~viD~~t~~~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~--G~~~~~i~~s~DG~~~ 92 (369)
T PF02239_consen 16 GSVAVIDGATNKVVARIPTGG-APHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV--GGNPRGIAVSPDGKYV 92 (369)
T ss_dssp TEEEEEETTT-SEEEEEE-ST-TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE---SSEEEEEEE--TTTEE
T ss_pred CEEEEEECCCCeEEEEEcCCC-CceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec--CCCcceEEEcCCCCEE
Confidence 599999999999888776542 234567899987 4456689999999999999999998 4667889999999999
Q ss_pred EEEe-CCCeEEEEEcCCC
Q psy2083 129 FIAN-ENKKILTYYIPSL 145 (248)
Q Consensus 129 ~sa~-ed~~I~~w~Ip~l 145 (248)
++++ .++++.++|...|
T Consensus 93 ~v~n~~~~~v~v~D~~tl 110 (369)
T PF02239_consen 93 YVANYEPGTVSVIDAETL 110 (369)
T ss_dssp EEEEEETTEEEEEETTT-
T ss_pred EEEecCCCceeEeccccc
Confidence 9887 5689999997665
|
... |
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.4e-05 Score=79.49 Aligned_cols=111 Identities=18% Similarity=0.295 Sum_probs=82.7
Q ss_pred eeEEEEeCCC-CcEEEeecCceeeeecCCeeEEEEcCCC-c--eeE-EecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 25 FNNLCHIPES-GMMFIANENKKILTYYIPAFYLYDIRAD-K--PLR-VKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 25 V~~~~~~~~~-g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~--pl~-~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
|+.+.+.+.+ +.+++++.+ |.|++||+|.+ + ++. ...-.||...+++..|++. ++|+..+.||||
T Consensus 1259 Iv~~slq~~G~~elvSgs~~--------G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy 1330 (1387)
T KOG1517|consen 1259 IVHLSLQRQGLGELVSGSQD--------GDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIY 1330 (1387)
T ss_pred ceeEEeecCCCcceeeeccC--------CeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEE
Confidence 8888888733 226666655 59999999995 1 222 2333456779999999987 666666999999
Q ss_pred ECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.. |+.+..+..+ ....+.|++|+|---++++|+.|..|.+|-.+.
T Consensus 1331 ~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1331 SLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred ecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence 987 7666665431 134678999999999999999999999997654
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00027 Score=65.85 Aligned_cols=112 Identities=9% Similarity=0.148 Sum_probs=73.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCC---CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDS---SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd---~~IKI 96 (248)
+.+...+|+|++..++.+.+.++ ...|.+||+.++.......+. .......|+|++ | .+++. ..|-+
T Consensus 234 ~~~~~~~~spDg~~l~~~~~~~~-----~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~s~dg~~l~~~s~~~g~~~iy~ 306 (417)
T TIGR02800 234 GMNGAPAFSPDGSKLAVSLSKDG-----NPDIYVMDLDGKQLTRLTNGP--GIDTEPSWSPDGKSIAFTSDRGGSPQIYM 306 (417)
T ss_pred CCccceEECCCCCEEEEEECCCC-----CccEEEEECCCCCEEECCCCC--CCCCCEEECCCCCEEEEEECCCCCceEEE
Confidence 44566788888776654433211 236999999987544333332 445677899987 4 34442 25778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip 143 (248)
||..+++. ..+.. +...+...+|+|||..|+.++.+. +|.+|++.
T Consensus 307 ~d~~~~~~-~~l~~-~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 307 MDADGGEV-RRLTF-RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred EECCCCCE-EEeec-CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 88887764 34443 245667889999999998888765 67777654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.4e-05 Score=78.96 Aligned_cols=96 Identities=14% Similarity=0.246 Sum_probs=74.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD 98 (248)
..|+++||-|||..++.+.++ .+.+||...|..+.+ +.|. .-|++|+|+.|+ .+| +.|+.|-||.
T Consensus 13 hci~d~afkPDGsqL~lAAg~---------rlliyD~ndG~llqtLKgHK--DtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAGS---------RLLVYDTSDGTLLQPLKGHK--DTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred cchheeEECCCCceEEEecCC---------EEEEEeCCCccccccccccc--ceEEEEEEccCCceeccCCCceeEEEec
Confidence 379999999999888887777 599999999987766 4555 889999999998 444 5799999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ 132 (248)
..--. .+.=.|...|.|+.|+|=+..|++++
T Consensus 82 ~klEG---~LkYSH~D~IQCMsFNP~~h~LasCs 112 (1081)
T KOG1538|consen 82 SKLEG---ILKYSHNDAIQCMSFNPITHQLASCS 112 (1081)
T ss_pred ccccc---eeeeccCCeeeEeecCchHHHhhhcc
Confidence 76322 22212578999999998777666654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.4e-05 Score=78.91 Aligned_cols=89 Identities=17% Similarity=0.271 Sum_probs=74.2
Q ss_pred eecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEe
Q psy2083 48 TYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHI 122 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~ 122 (248)
|+..|.|.+|+.... +|...+.|. ..|-++.|+.|+ ++| |||+++|+|++++++.+. +.-+ |++.|..+||.
T Consensus 151 gsv~~~iivW~~~~dn~p~~l~GHe--G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg-HsaRvw~~~~~ 227 (967)
T KOG0974|consen 151 GSVFGEIIVWKPHEDNKPIRLKGHE--GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG-HSARVWACCFL 227 (967)
T ss_pred ccccccEEEEeccccCCcceecccC--CceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc-ccceeEEEEec
Confidence 344568999998743 677666666 899999999998 544 799999999999988776 3344 79999999999
Q ss_pred CCCCEEEEEeCCCeEEEEE
Q psy2083 123 PESGMMFIANENKKILTYY 141 (248)
Q Consensus 123 pdsgll~sa~ed~~I~~w~ 141 (248)
|+ .|.++++|.+..+|.
T Consensus 228 ~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 228 PN--RIITVGEDCTCRVWG 244 (967)
T ss_pred cc--eeEEeccceEEEEEe
Confidence 99 999999999999994
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00028 Score=67.27 Aligned_cols=111 Identities=12% Similarity=0.162 Sum_probs=70.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeC-CCeEEEE--
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMD-SSVVKIW-- 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssd-d~~IKIW-- 97 (248)
.+....|+||+..++.+.+.++ ...|.+||+.++++.....+. ..+....|+||+ | .+++ ++..+||
T Consensus 244 ~~~~~~~SPDG~~La~~~~~~g-----~~~I~~~d~~tg~~~~lt~~~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~ 316 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFALSKTG-----SLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKV 316 (429)
T ss_pred CcCCeEECCCCCEEEEEEcCCC-----CcEEEEEECCCCCEEEccCCC--CCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence 3456789998877765433221 126999999988765443332 467889999997 4 4554 3445555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEcC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYIP 143 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~Ip 143 (248)
|..+|+. ..+.. +.....+.+|+|||..|+.++.+ + .|.+|++.
T Consensus 317 d~~~g~~-~~lt~-~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~ 363 (429)
T PRK03629 317 NINGGAP-QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 363 (429)
T ss_pred ECCCCCe-EEeec-CCCCccCEEECCCCCEEEEEEccCCCceEEEEECC
Confidence 6776654 34443 13445678999999888776543 3 46666653
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.6e-05 Score=74.22 Aligned_cols=88 Identities=15% Similarity=0.268 Sum_probs=64.5
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc-ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY-VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~-l~ 87 (248)
|++.-.++ |.+.+..++++||+..++++-.|. +||+ .|-+.+..+ +--+|...|..++.-++. ++
T Consensus 142 ~~~~~~lG--hvSml~dVavS~D~~~IitaDRDE--------kIRv--s~ypa~f~IesfclGH~eFVS~isl~~~~~Ll 209 (390)
T KOG3914|consen 142 GRCEPILG--HVSMLLDVAVSPDDQFIITADRDE--------KIRV--SRYPATFVIESFCLGHKEFVSTISLTDNYLLL 209 (390)
T ss_pred cCcchhhh--hhhhhheeeecCCCCEEEEecCCc--------eEEE--EecCcccchhhhccccHhheeeeeeccCceee
Confidence 44444333 368999999999998888887776 6776 344444332 333455899999999887 55
Q ss_pred e-eCCCeEEEEECCCCCEEEEeec
Q psy2083 88 S-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 88 S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
| +.|++|++||..+|+++.++.-
T Consensus 210 S~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 210 SGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred ecCCCCcEEEEecccCCcccccch
Confidence 5 5799999999999999988753
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00013 Score=70.75 Aligned_cols=108 Identities=12% Similarity=0.178 Sum_probs=81.8
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IK 95 (248)
.+.|.+++|+|.+.-.+++=+-. =.+|.+||+| ++|+..+.. +|=|++-|+|.+ ++++ -.|.|-
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfM------PAkvtifnlr-~~~v~df~e---gpRN~~~fnp~g~ii~lAGFGNL~G~mE 339 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFM------PAKVTIFNLR-GKPVFDFPE---GPRNTAFFNPHGNIILLAGFGNLPGDME 339 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecc------cceEEEEcCC-CCEeEeCCC---CCccceEECCCCCEEEEeecCCCCCceE
Confidence 47899999999665444432221 1489999999 467777654 477999999998 4444 378999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC------CeEEEEEc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN------KKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed------~~I~~w~I 142 (248)
|||..+.+++.+++. ..-+-+.|+|||..|++|.-. ..|++|.+
T Consensus 340 vwDv~n~K~i~~~~a---~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 340 VWDVPNRKLIAKFKA---ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred EEeccchhhcccccc---CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence 999999999999886 344457899999999999865 55678864
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.8e-05 Score=74.55 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=66.4
Q ss_pred CCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Q psy2083 70 HMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|.+-||++.|+.++ ++| |||--+-|||.-.-|++++|..+|.+.|-|+.|.| +..++++|..|..|++|++..
T Consensus 47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 3556999999999998 554 58888889999999999999988899999999999 557899999999999999875
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00038 Score=64.92 Aligned_cols=111 Identities=11% Similarity=0.118 Sum_probs=72.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee-C--CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM-D--SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss-d--d~~IKI 96 (248)
..+.+..++|++..++.+...+ ....|.+||+.+++......+. ..+.++.|+||+ + +++ . ...|.+
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~-----~~~~i~v~d~~~g~~~~~~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~i~~ 262 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFES-----GKPEIYVQDLATGQREKVASFP--GMNGAPAFSPDGSKLAVSLSKDGNPDIYV 262 (417)
T ss_pred CceecccCCCCCCEEEEEEcCC-----CCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEEEEEECCCCCccEEE
Confidence 4577888999888776554432 1248999999998655443332 456779999997 3 333 2 336889
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEc
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYI 142 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~I 142 (248)
||..+++. ..+.. +.....+.+|+|||..|+..++ ++...+|.+
T Consensus 263 ~d~~~~~~-~~l~~-~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~ 307 (417)
T TIGR02800 263 MDLDGKQL-TRLTN-GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMM 307 (417)
T ss_pred EECCCCCE-EECCC-CCCCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 99987764 44443 2444557789999987776654 444344443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00015 Score=73.21 Aligned_cols=115 Identities=13% Similarity=0.193 Sum_probs=86.6
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE-cC-CC-ceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD-IR-AD-KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVV 94 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD-lR-s~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~I 94 (248)
|+-.++..+++| ++..++++..+ |.|.+|- +. +. +-..+.-|-|-.+|++++|++++ |+|+ -.+.+
T Consensus 204 Htf~~t~~~~sp-n~~~~Aa~d~d-------GrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VL 275 (792)
T KOG1963|consen 204 HTFNITCVALSP-NERYLAAGDSD-------GRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVL 275 (792)
T ss_pred hcccceeEEecc-ccceEEEeccC-------CcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEE
Confidence 344567777777 55555555554 5999995 44 12 22334456666899999999998 6665 67888
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
-+|...|++ ..+-|.=.++|.++.++|||.+.....+|.+|++--.|.|
T Consensus 276 v~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl 324 (792)
T KOG1963|consen 276 VLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL 324 (792)
T ss_pred EEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence 899999988 5666632479999999999999999999999999887766
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.1e-05 Score=77.31 Aligned_cols=124 Identities=10% Similarity=0.198 Sum_probs=93.8
Q ss_pred ecCCCCCeeEEEEeCCCCcE-EEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCC---ceeeeCCC
Q psy2083 18 ESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDN---YVLSMDSS 92 (248)
Q Consensus 18 ~~~~~~~V~~~~~~~~~g~l-~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d---~l~Ssdd~ 92 (248)
-++|...|++.-|.|+.--+ ++++-|. .|-.||+|++ +|+...+.-+ ..-..|+|+-. .++++..+
T Consensus 110 lhghsraitd~n~~~q~pdVlatcsvdt--------~vh~wd~rSp~~p~ys~~~w~-s~asqVkwnyk~p~vlasshg~ 180 (1081)
T KOG0309|consen 110 LHGHSRAITDINFNPQHPDVLATCSVDT--------YVHAWDMRSPHRPFYSTSSWR-SAASQVKWNYKDPNVLASSHGN 180 (1081)
T ss_pred EecCccceeccccCCCCCcceeeccccc--------cceeeeccCCCcceeeeeccc-ccCceeeecccCcchhhhccCC
Confidence 34458899999999877664 4555554 8999999998 7877654221 34467777643 27788899
Q ss_pred eEEEEECCCC-CEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhc
Q psy2083 93 VVKIWSKDNG-SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEE 164 (248)
Q Consensus 93 ~IKIWD~~tG-k~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~ 164 (248)
-|.+||.+.| .++.++.+ |.+.||++.|.- --+.+++.+.|++|+.|+ .++=|+|.+.
T Consensus 181 ~i~vwd~r~gs~pl~s~K~-~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~-------------y~kSt~e~~~ 240 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKG-HVSSVNSIDFNRFKYSEIMSSSNDGTVKFWD-------------YSKSTTESKR 240 (1081)
T ss_pred ceEEEeccCCCcceEEecc-cceeeehHHHhhhhhhhhcccCCCCceeeec-------------ccccccccce
Confidence 9999999975 68899998 689999999864 336789999999999997 4555666665
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00056 Score=65.07 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=71.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKI 96 (248)
+.+....|+||+..++.+.+.++ ...|.+||+.++.+.....+. .......|+||+ +.+++ + ..|.+
T Consensus 246 g~~~~~~~SPDG~~la~~~~~~g-----~~~Iy~~d~~~~~~~~Lt~~~--~~~~~~~~spDG~~i~f~s~~~g~~~Iy~ 318 (435)
T PRK05137 246 GMTFAPRFSPDGRKVVMSLSQGG-----NTDIYTMDLRSGTTTRLTDSP--AIDTSPSYSPDGSQIVFESDRSGSPQLYV 318 (435)
T ss_pred CcccCcEECCCCCEEEEEEecCC-----CceEEEEECCCCceEEccCCC--CccCceeEcCCCCEEEEEECCCCCCeEEE
Confidence 45667888998877654433221 236888899988654433332 456778999997 33443 2 36888
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEc
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYI 142 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~I 142 (248)
||..+++. ..+..+ ...++...|+|||..|+..+.+ + .|.+|+.
T Consensus 319 ~d~~g~~~-~~lt~~-~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 319 MNADGSNP-RRISFG-GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred EECCCCCe-EEeecC-CCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 89876654 444431 4556778999999988776643 3 5666663
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00013 Score=66.91 Aligned_cols=139 Identities=12% Similarity=0.194 Sum_probs=101.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEE-ecCCCCCCeeEEEEcCCc---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRV-KDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~-~~h~~~~pI~sI~F~~d~--- 85 (248)
...++..| ...|+.+++.|.+..+++++-|. .-.+|..+++ +|..+ +.+. ...++|.|+|..
T Consensus 47 ~~htls~H-d~~vtgvdWap~snrIvtcs~dr--------nayVw~~~~~~~WkptlvLlRiN--rAAt~V~WsP~enkF 115 (361)
T KOG1523|consen 47 PAHTLSEH-DKIVTGVDWAPKSNRIVTCSHDR--------NAYVWTQPSGGTWKPTLVLLRIN--RAATCVKWSPKENKF 115 (361)
T ss_pred eceehhhh-CcceeEEeecCCCCceeEccCCC--------CccccccCCCCeeccceeEEEec--cceeeEeecCcCceE
Confidence 45566665 57899999999887899988887 6799999776 56554 3454 789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEE---Ee-ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE--EcCCC---CCCCCcccc--
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFT---CI-ESGDQTQFNNLCHIPESGMMFIANENKKILTY--YIPSL---GPAPKWCGF-- 154 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~---ti-e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w--~Ip~l---G~aP~wcs~-- 154 (248)
++++..+.|.||=.+.-+..- -+ .| +.+.|+++.++||.-+|++|+-|++++++ ||... -..|.|-+.
T Consensus 116 AVgSgar~isVcy~E~ENdWWVsKhikkP-irStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~P 194 (361)
T KOG1523|consen 116 AVGSGARLISVCYYEQENDWWVSKHIKKP-IRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMP 194 (361)
T ss_pred EeccCccEEEEEEEecccceehhhhhCCc-cccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCc
Confidence 666788999998766432220 01 23 36789999999999999999999999988 44333 233447664
Q ss_pred ccchhhhhh
Q psy2083 155 LDNLTEELE 163 (248)
Q Consensus 155 ld~~tee~e 163 (248)
+..|.-|+.
T Consensus 195 FG~lm~E~~ 203 (361)
T KOG1523|consen 195 FGQLMSEAS 203 (361)
T ss_pred HHHHHHhhc
Confidence 456777774
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00052 Score=64.82 Aligned_cols=121 Identities=6% Similarity=0.070 Sum_probs=75.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|...+.+-.+ ...+....++||+..++.++.+++ ...|.+||+.++++....... ..+....|+||+ |+
T Consensus 188 g~~~~~l~~~-~~~~~~p~wSpDG~~la~~s~~~~-----~~~l~~~~l~~g~~~~l~~~~--g~~~~~~~SpDG~~la~ 259 (430)
T PRK00178 188 GARAVTLLQS-REPILSPRWSPDGKRIAYVSFEQK-----RPRIFVQNLDTGRREQITNFE--GLNGAPAWSPDGSKLAF 259 (430)
T ss_pred CCCceEEecC-CCceeeeeECCCCCEEEEEEcCCC-----CCEEEEEECCCCCEEEccCCC--CCcCCeEECCCCCEEEE
Confidence 4333444333 357788899998887765554321 247999999988664433221 345578999997 33
Q ss_pred ee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 88 SM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 88 Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
+. .++ .|.+||..+|+.. .+.. +.....+..|+|||..|+..++ ++...+|.
T Consensus 260 ~~~~~g~~~Iy~~d~~~~~~~-~lt~-~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~ 315 (430)
T PRK00178 260 VLSKDGNPEIYVMDLASRQLS-RVTN-HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYK 315 (430)
T ss_pred EEccCCCceEEEEECCCCCeE-Eccc-CCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 33 333 6888899987653 4544 2455667899999987665553 44444443
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=5.3e-05 Score=67.85 Aligned_cols=106 Identities=14% Similarity=0.278 Sum_probs=75.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----eeeeCCCeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY----VLSMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIW 97 (248)
.|..+|..|..+.++.+|+++ |.|.|||.|.. .|.-. +.|. .+|+.|-|||.. +.+++|+.+=-|
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~d-------g~~~l~d~rn~~~p~S~l~ahk--~~i~eV~FHpk~p~~Lft~sedGslw~w 251 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDD-------GIVGLWDARNVAMPVSLLKAHK--AEIWEVHFHPKNPEHLFTCSEDGSLWHW 251 (319)
T ss_pred cchhhhCCcccccEEEEecCC-------CeEEEEEcccccchHHHHHHhh--hhhhheeccCCCchheeEecCCCcEEEE
Confidence 588999999888888888876 59999999987 34332 3555 899999999975 666799999999
Q ss_pred ECCCCCEEE------------------E------eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 98 SKDNGSLFT------------------C------IESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 98 D~~tGk~~~------------------t------ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|..+ +++. + +.++....||++.+ -|..|++|++-+-|.++.
T Consensus 252 das~-~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 252 DAST-TFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cCCC-ceEEecCccccccccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence 9873 2222 1 11111234564444 577889999888888774
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00074 Score=64.26 Aligned_cols=110 Identities=10% Similarity=0.123 Sum_probs=69.0
Q ss_pred CeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CC--eEEE
Q psy2083 24 QFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SS--VVKI 96 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~--~IKI 96 (248)
......|+|++..++ +.+.++ ...|.+||+.++.......+. .......|+||+ +.+++ ++ .|-+
T Consensus 249 ~~~~~~~SpDG~~l~~~~s~~g------~~~Iy~~d~~~g~~~~lt~~~--~~~~~~~~spDG~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 249 INGAPSFSPDGRRLALTLSRDG------NPEIYVMDLGSRQLTRLTNHF--GIDTEPTWAPDGKSIYFTSDRGGRPQIYR 320 (433)
T ss_pred CccCceECCCCCEEEEEEeCCC------CceEEEEECCCCCeEECccCC--CCccceEECCCCCEEEEEECCCCCceEEE
Confidence 344678889887665 333332 247999999988654433332 345678999997 44454 33 3666
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~Ip 143 (248)
+|..+|+. ..+..+ .......+|+|||..|+..+.+ + .|.+|++.
T Consensus 321 ~dl~~g~~-~~lt~~-g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 321 VAASGGSA-ERLTFQ-GNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred EECCCCCe-EEeecC-CCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 67777764 333321 2334468999999988876543 3 57888763
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00021 Score=74.63 Aligned_cols=114 Identities=18% Similarity=0.244 Sum_probs=88.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc------eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~------l~Ss--dd~~I 94 (248)
+-|+++|..|-+.++++|.+. |.+-+||+|=+.|+....|.+..||+.+..+|-. ++++ ..+-|
T Consensus 1196 G~vTSi~idp~~~WlviGts~--------G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nev 1267 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSR--------GQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEV 1267 (1431)
T ss_pred cceeEEEecCCceEEEEecCC--------ceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCce
Confidence 688999999988778777666 4899999999999998888888999999887642 3332 46789
Q ss_pred EEEECCCCCEEEEeecC------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 95 KIWSKDNGSLFTCIESG------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|+..+|..-+++-.. +..+.+..++..-++.+++|+.|.+|+-||.+.
T Consensus 1268 s~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1268 STWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred eeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 99999999877665431 112234556666778999999999999999764
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=7.9e-05 Score=71.39 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=98.0
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~ 87 (248)
+...+..| .+.|+++-|...+..++++++|. +|-+||--+++|...+.-+|-..|-.-.|-|.. +.
T Consensus 134 l~~kL~~H-~GcVntV~FN~~Gd~l~SgSDD~--------~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~ 204 (559)
T KOG1334|consen 134 LQKKLNKH-KGCVNTVHFNQRGDVLASGSDDL--------QVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVT 204 (559)
T ss_pred hhhcccCC-CCccceeeecccCceeeccCccc--------eEEeehhhccCcccccccccccchhhhhccCCCCCcCcee
Confidence 34445665 69999999998776666666665 899999999999888866666778888898864 55
Q ss_pred eeCCCeEEEEECC-CCCEE--EEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 88 SMDSSVVKIWSKD-NGSLF--TCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 88 Ssdd~~IKIWD~~-tGk~~--~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
++.|++|++=.+- +|.+. ..+.+ |..+|+.+++-|++ .-|+++++|+.+...++..=-|+-
T Consensus 205 ~s~dgqvr~s~i~~t~~~e~t~rl~~-h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~ 269 (559)
T KOG1334|consen 205 SSRDGQVRVSEILETGYVENTKRLAP-HEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE 269 (559)
T ss_pred ccccCceeeeeeccccceecceeccc-ccCccceeeecCCCCCcccccccccceeeeeeccCCccc
Confidence 6789999986654 34433 23334 68999999999988 668899999999999988766663
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=71.50 Aligned_cols=118 Identities=12% Similarity=0.227 Sum_probs=94.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
...+|.+. ..|+.+.++..|.+++++..++ ..-.|.|++|..++ |+.. .+ +-|..+.|||.. ++
T Consensus 514 v~~~I~~~--k~i~~vtWHrkGDYlatV~~~~-----~~~~VliHQLSK~~sQ~PF~k-sk---G~vq~v~FHPs~p~lf 582 (733)
T KOG0650|consen 514 VCIVIKHP--KSIRQVTWHRKGDYLATVMPDS-----GNKSVLIHQLSKRKSQSPFRK-SK---GLVQRVKFHPSKPYLF 582 (733)
T ss_pred eEEEEecC--CccceeeeecCCceEEEeccCC-----CcceEEEEecccccccCchhh-cC---CceeEEEecCCCceEE
Confidence 44555554 7899999999999888876654 23589999997653 3322 22 468999999997 66
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-+..+.|+|||...+..+..+.++ ...|.+++++|+|.-|+.++.|++|.-|++
T Consensus 583 VaTq~~vRiYdL~kqelvKkL~tg-~kwiS~msihp~GDnli~gs~d~k~~WfDl 636 (733)
T KOG0650|consen 583 VATQRSVRIYDLSKQELVKKLLTG-SKWISSMSIHPNGDNLILGSYDKKMCWFDL 636 (733)
T ss_pred EEeccceEEEehhHHHHHHHHhcC-CeeeeeeeecCCCCeEEEecCCCeeEEEEc
Confidence 677889999999988888888774 779999999999999999999999988875
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.1e-05 Score=71.83 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=67.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD 98 (248)
..|.++++-|++..++-+.++ ++.|=-+... +|+.-+.|. +-|.++.|++.. ++| +.|-..||||
T Consensus 146 ~~v~c~~W~p~S~~vl~c~g~---------h~~IKpL~~n~k~i~WkAHD--GiiL~~~W~~~s~lI~sgGED~kfKvWD 214 (737)
T KOG1524|consen 146 ESIRCARWAPNSNSIVFCQGG---------HISIKPLAANSKIIRWRAHD--GLVLSLSWSTQSNIIASGGEDFRFKIWD 214 (737)
T ss_pred ceeEEEEECCCCCceEEecCC---------eEEEeecccccceeEEeccC--cEEEEeecCccccceeecCCceeEEeec
Confidence 468888888988776655554 4555556544 778888887 889999999986 555 5799999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
.. |.++-+-.+ |..+|++++|.|| .+++.+
T Consensus 215 ~~-G~~Lf~S~~-~ey~ITSva~npd-~~~~v~ 244 (737)
T KOG1524|consen 215 AQ-GANLFTSAA-EEYAITSVAFNPE-KDYLLW 244 (737)
T ss_pred cc-CcccccCCh-hccceeeeeeccc-cceeee
Confidence 87 666665555 4667777776655 444433
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00059 Score=65.52 Aligned_cols=112 Identities=12% Similarity=0.115 Sum_probs=71.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-ee-eCCC--eEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LS-MDSS--VVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~S-sdd~--~IKI 96 (248)
..+.+..|+||+..++.++.+++ ...|.+||+.++++....... .......|+||+ + .+ +.++ .|.+
T Consensus 218 ~~~~~p~wSPDG~~La~~s~~~g-----~~~L~~~dl~tg~~~~lt~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 218 EPLMSPAWSPDGRKLAYVSFENR-----KAEIFVQDIYTQVREKVTSFP--GINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred CcccCceECCCCCEEEEEEecCC-----CcEEEEEECCCCCeEEecCCC--CCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 45678899998887765544321 137999999988764432211 234578999997 3 33 3344 4778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
||.++|+. ..+.. +.......+|+|||..|+..++ ++...+|.+.
T Consensus 291 ~dl~tg~~-~~lt~-~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 291 VDIATKAL-TRITR-HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred EECCCCCe-EECcc-CCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 89987764 44544 2455677899999987766554 4555555443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00019 Score=67.11 Aligned_cols=153 Identities=17% Similarity=0.169 Sum_probs=104.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce----eEEecCCCCCCeeEEEEcCCc----e--eeeCCCeEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP----LRVKDHMYGLPIRDIKFHDNY----V--LSMDSSVVK 95 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p----l~~~~h~~~~pI~sI~F~~d~----l--~Ssdd~~IK 95 (248)
..+.++|.+.+++.+.+++ ...++|.+...+ +.+..-. ..-++|.|..+. | -++|...+.
T Consensus 66 ~~~~~s~~~~llAv~~~~K--------~~~~f~~~~~~~~~kl~~~~~v~--~~~~ai~~~~~~~sv~v~dkagD~~~~d 135 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSK--------QRAVFDYRENPKGAKLLDVSCVP--KRPTAISFIREDTSVLVADKAGDVYSFD 135 (390)
T ss_pred cccccCCCceEEEEEeCCC--------ceEEEEEecCCCcceeeeEeecc--cCcceeeeeeccceEEEEeecCCceeee
Confidence 4445555444444444444 556777776543 2222111 223455555442 2 235788999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCce
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYK 175 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~ 175 (248)
+|....|.+.-. -+ |-+-+.+|+++||+..|++|..|.+|++=-.|+.-..-.||.-=..-+ ....++++|-
T Consensus 136 i~s~~~~~~~~~-lG-hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFV------S~isl~~~~~ 207 (390)
T KOG3914|consen 136 ILSADSGRCEPI-LG-HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFV------STISLTDNYL 207 (390)
T ss_pred eecccccCcchh-hh-hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhhe------eeeeeccCce
Confidence 999887654322 23 689999999999999999999999999999999888899994111111 2457899999
Q ss_pred eecHhHHhhcCCccccCCCcc
Q psy2083 176 FVTRQELEDLGLGHLIGTSLL 196 (248)
Q Consensus 176 fvt~~~l~~l~~~~ligt~~l 196 (248)
.++..-...|.+|++.-...|
T Consensus 208 LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 208 LLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred eeecCCCCcEEEEecccCCcc
Confidence 999999999999998877666
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00039 Score=67.64 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=79.0
Q ss_pred ecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCe
Q psy2083 41 NENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQF 116 (248)
Q Consensus 41 g~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~I 116 (248)
+.+--++|+..|.|.+|++-.++-..... -.|..+|+++..+.+. +-| ++|..|-.|+..+++.+..+... +..+
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~-~~~~ 147 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ-KPLV 147 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC-CCcc
Confidence 33344477778999999999987655432 3455899999999886 555 47888999999999999888873 7788
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 117 NNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 117 n~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++|.+|||+++++|+ ++|++|+|..
T Consensus 148 ~sl~is~D~~~l~~as--~~ik~~~~~~ 173 (541)
T KOG4547|consen 148 SSLCISPDGKILLTAS--RQIKVLDIET 173 (541)
T ss_pred ceEEEcCCCCEEEecc--ceEEEEEccC
Confidence 8999999999998886 5677777543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=97.70 E-value=4.5e-05 Score=72.99 Aligned_cols=111 Identities=16% Similarity=0.315 Sum_probs=86.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c----------ee---EEecCCCCCCeeEEEEcC-Cc-
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K----------PL---RVKDHMYGLPIRDIKFHD-NY- 85 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~----------pl---~~~~h~~~~pI~sI~F~~-d~- 85 (248)
.-.|++++|+.+++-+.++=.|. .|.|+.-.-+ . ++ ..|+|.+...|+.|.|-. ..
T Consensus 336 ~v~ITgl~Ysh~~sElLaSYnDe--------~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsE 407 (559)
T KOG1334|consen 336 PVNITGLVYSHDGSELLASYNDE--------DIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSE 407 (559)
T ss_pred cccceeEEecCCccceeeeeccc--------ceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccc
Confidence 45789999997776666555554 5788831111 1 11 146888888999999874 33
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+| ||-|-|-|||..+|+.+.-+++ +..-|||+.-+|--.+|++.+-|..|++|-
T Consensus 408 yVvSGSDCGhIFiW~K~t~eii~~Meg-Dr~VVNCLEpHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 408 YVVSGSDCGHIFIWDKKTGEIIRFMEG-DRHVVNCLEPHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred eEEecCccceEEEEecchhHHHHHhhc-ccceEeccCCCCCCchhhccCCccceeeec
Confidence 555 6888999999999999999998 467999999999999999999999999994
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00044 Score=63.31 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=58.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcCCc---eeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
+..| .+.|..+.-.-+|.+++++|..+- -|||||.+++.++...--+. ...|.+|+|+|+. .++||.+
T Consensus 177 I~AH-~s~Iacv~Ln~~Gt~vATaStkGT-------LIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 177 INAH-DSDIACVALNLQGTLVATASTKGT-------LIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred EEcc-cCceeEEEEcCCccEEEEeccCcE-------EEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 4565 577777777776666667666652 79999999999988753232 2579999999997 5567999
Q ss_pred eEEEEECCC
Q psy2083 93 VVKIWSKDN 101 (248)
Q Consensus 93 ~IKIWD~~t 101 (248)
+|.|+.++.
T Consensus 249 TlHiF~l~~ 257 (346)
T KOG2111|consen 249 TLHIFSLRD 257 (346)
T ss_pred eEEEEEeec
Confidence 999998875
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0018 Score=68.67 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=76.5
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-C----------C----------CCCCeeEEEEcC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-H----------M----------YGLPIRDIKFHD 83 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h----------~----------~~~pI~sI~F~~ 83 (248)
.+.++++|+++.++++...+ +.|++||+.++....... . + ...| ..|+|++
T Consensus 742 P~GIavspdG~~LYVADs~n-------~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P-~Gvavd~ 813 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSES-------SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP-LGVLCAK 813 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCC-------CeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC-ceeeEeC
Confidence 35688889888677665554 489999998765322110 0 0 0012 4788988
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ |+-+.++.|++||..++...+....+ .-.....++++|+|.++++-+.+..|++|++..
T Consensus 814 dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 814 DGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred CCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 87 44456889999999987665433211 012567899999999888888889999999755
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0027 Score=60.44 Aligned_cols=111 Identities=8% Similarity=0.045 Sum_probs=65.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEE--EEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYL--YDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~L--wDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~~IKI 96 (248)
+.+....|+||+..++.+.+.+ |...| +|+.++.+.....+. ..+.+..|+||+ +.+++ ++...|
T Consensus 240 g~~~~~~~SPDG~~la~~~~~~-------g~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~wSpDG~~l~f~s~~~g~~~I 310 (427)
T PRK02889 240 GSNSAPAWSPDGRTLAVALSRD-------GNSQIYTVNADGSGLRRLTQSS--GIDTEPFFSPDGRSIYFTSDRGGAPQI 310 (427)
T ss_pred CCccceEECCCCCEEEEEEccC-------CCceEEEEECCCCCcEECCCCC--CCCcCeEEcCCCCEEEEEecCCCCcEE
Confidence 3456788899887776443332 24444 456555433222222 445678999997 33454 456667
Q ss_pred EEC--CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcCC
Q psy2083 97 WSK--DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIPS 144 (248)
Q Consensus 97 WD~--~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip~ 144 (248)
|.. .+|+. ..+... .....+.+|+|||..|+..+.++ .|.+|++..
T Consensus 311 y~~~~~~g~~-~~lt~~-g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~ 361 (427)
T PRK02889 311 YRMPASGGAA-QRVTFT-GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT 361 (427)
T ss_pred EEEECCCCce-EEEecC-CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC
Confidence 754 44443 333221 22334578999999988776543 588888654
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00016 Score=64.85 Aligned_cols=66 Identities=15% Similarity=0.302 Sum_probs=55.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
.|+.+..-||+..++++|-|+ .||+|.-|+.+|+.+. .|. ..|++|+|+|+. .+++.|..|.+|++
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~--------RiRVyswrtl~pLAVLkyHs--agvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDH--------RIRVYSWRTLNPLAVLKYHS--AGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccCCcEEeecccCC--------cEEEEEeccCCchhhhhhhh--cceeEEEeCCCCchhhhccCCceEEeeec
Confidence 577888889888888999886 7999999999999885 555 889999999995 33457999999986
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0003 Score=71.44 Aligned_cols=125 Identities=11% Similarity=0.145 Sum_probs=89.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-CCCe
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSV 93 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~ 93 (248)
|+--+++.|.++..+.++.-++++.+- +....|.|-|| +.+|.|-.- -.|..-+++++|||.. ++.+ .-+.
T Consensus 9 IE~~Dsdavsti~SWHPsePlfAVA~f---S~er~GSVtIf-adtGEPqr~--Vt~P~hatSLCWHpe~~vLa~gwe~g~ 82 (1416)
T KOG3617|consen 9 IEFLDSDAVSTISSWHPSEPLFAVASF---SPERGGSVTIF-ADTGEPQRD--VTYPVHATSLCWHPEEFVLAQGWEMGV 82 (1416)
T ss_pred eecccccccccccccCCCCceeEEEEe---cCCCCceEEEE-ecCCCCCcc--cccceehhhhccChHHHHHhhccccce
Confidence 333344566666666556555544321 12345788887 345666432 2222345789999997 4444 6889
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+.+|...+.+.-+..++ |+++|.-+.|+|+|+.++++..-+.+..|..-.+|..
T Consensus 83 ~~v~~~~~~e~htv~~t-h~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~ 136 (1416)
T KOG3617|consen 83 SDVQKTNTTETHTVVET-HPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEI 136 (1416)
T ss_pred eEEEecCCceeeeeccC-CCCCceeEEecCCCCeEEEcCCCceeEEEEeeecccc
Confidence 99999998887777778 7999999999999999999999999999998777665
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00028 Score=65.40 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=79.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------eE-Ee-cCCC-------CCCeeEEEEcCCc--e
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------LR-VK-DHMY-------GLPIRDIKFHDNY--V 86 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l~-~~-~h~~-------~~pI~sI~F~~d~--l 86 (248)
-|++.-|+|...++|+=+++. |+|+|-|+|.... +. .. +... -..|..|.|++++ +
T Consensus 215 VITsaEFhp~~cn~f~YSSSK-------GtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryi 287 (433)
T KOG1354|consen 215 VITSAEFHPHHCNVFVYSSSK-------GTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYI 287 (433)
T ss_pred HHhhhccCHhHccEEEEecCC-------CcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEE
Confidence 356777888877788777765 6999999996521 10 00 1110 1357789999998 7
Q ss_pred eeeCCCeEEEEEC-CCCCEEEEeecC-----------CCCCe---eEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LSMDSSVVKIWSK-DNGSLFTCIESG-----------DQTQF---NNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~-~tGk~~~tie~~-----------h~~~I---n~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++-|--+|||||. ...+++.+++.| ....| -.+||+.++..+++|+-..-.++|.
T Consensus 288 lsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~ 357 (433)
T KOG1354|consen 288 LSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN 357 (433)
T ss_pred EEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence 7778889999999 457888887652 01122 3578899999999999999999997
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00044 Score=39.84 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=33.7
Q ss_pred CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 102 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 102 Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+++...+.. |...|+++++.|++.++++++.|+.+.+|+
T Consensus 2 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKG-HTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEe-cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456677776 588999999999999999999999999984
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00044 Score=64.75 Aligned_cols=109 Identities=13% Similarity=0.124 Sum_probs=79.7
Q ss_pred chhcCc-eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~-~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|++.|+ .+.+|.-. ...+.++.-.|.+..++++..- |.+..+|+|+++-+...-.+..+.|.+|.-||..
T Consensus 232 Dt~~qRRPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~--------g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~ 302 (412)
T KOG3881|consen 232 DTRHQRRPVAQFDFL-ENPISSTGLTPSGNFIYTGNTK--------GQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTH 302 (412)
T ss_pred cCcccCcceeEeccc-cCcceeeeecCCCcEEEEeccc--------chhheecccCceeeccccCCccCCcceEEEcCCC
Confidence 334443 67777655 4567777777855545555444 4999999999987766434555789999999996
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
++| +-|+.|||+|.++.+++..+-- .+.+|++-+.++-.
T Consensus 303 ~~las~GLDRyvRIhD~ktrkll~kvYv--Ks~lt~il~~~~~n 344 (412)
T KOG3881|consen 303 PVLASCGLDRYVRIHDIKTRKLLHKVYV--KSRLTFILLRDDVN 344 (412)
T ss_pred ceEEeeccceeEEEeecccchhhhhhhh--hccccEEEecCCcc
Confidence 554 4699999999999888887766 67888888876543
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00019 Score=77.36 Aligned_cols=163 Identities=15% Similarity=0.237 Sum_probs=105.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee---
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL--- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~--- 87 (248)
|..+.++....++.|+.+.|..+|+..-++-+| |.+.+|.+. ++|+... ..|....++..|-...++
T Consensus 2240 ~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~d--------g~l~l~q~~-pk~~~s~-qchnk~~~Df~Fi~s~~~tag 2309 (2439)
T KOG1064|consen 2240 GQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGD--------GDLSLWQAS-PKPYTSW-QCHNKALSDFRFIGSLLATAG 2309 (2439)
T ss_pred CCeEEEeeccCcchhhhhhhcccCCceeeeccC--------CceeecccC-Ccceecc-ccCCccccceeeeehhhhccc
Confidence 445555543335677778777766543333333 589999997 7787654 233366788888876533
Q ss_pred -eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccc
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI 166 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~ 166 (248)
++|++.+-+||..-.....-+...|....+++++.|...+|++|+.+|.|.+|||.+---.-.|=. || |+|
T Consensus 2310 ~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-~~--~~~----- 2381 (2439)
T KOG1064|consen 2310 RSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-LD--TRE----- 2381 (2439)
T ss_pred cCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-hh--hhh-----
Confidence 357899999997642211122222688999999999999999999999999999987444444433 33 332
Q ss_pred cccccCCceeecHhHHhhcCCccccCCCccccc
Q psy2083 167 IENVYDDYKFVTRQELEDLGLGHLIGTSLLRAY 199 (248)
Q Consensus 167 ~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~y 199 (248)
-|+|-.---.+++|.+=+-.++...
T Consensus 2382 --------~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2382 --------YFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred --------eeeccCcccceEEEEccccchhhcC
Confidence 3666555555666654444444433
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.46 E-value=9.8e-05 Score=66.18 Aligned_cols=89 Identities=15% Similarity=0.254 Sum_probs=66.0
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeC-CCC
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIP-ESG 126 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~p-dsg 126 (248)
..+.||++--+-+.. .+.....|.+++-||.. ++ +++++.|-+||.+++..-.+ +.. |+++|+.+-|+| ++.
T Consensus 160 ~~~a~~~~p~~t~~~-~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~a-hk~~i~eV~FHpk~p~ 237 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIP-SKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKA-HKAEIWEVHFHPKNPE 237 (319)
T ss_pred ceeeecccccccccc-cccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHH-hhhhhhheeccCCCch
Confidence 567777775433222 22222458999999875 33 45899999999998754444 345 699999999999 667
Q ss_pred EEEEEeCCCeEEEEEcC
Q psy2083 127 MMFIANENKKILTYYIP 143 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip 143 (248)
-||++++||.+..|+..
T Consensus 238 ~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 238 HLFTCSEDGSLWHWDAS 254 (319)
T ss_pred heeEecCCCcEEEEcCC
Confidence 89999999999999865
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.005 Score=58.14 Aligned_cols=111 Identities=8% Similarity=0.063 Sum_probs=67.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKIW 97 (248)
.+....|+|++..++.+.+.++ ...|.+||+.+++......+. .......|+||+ +.+++ + ..|-+|
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g-----~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~~spDg~~i~f~s~~~g~~~iy~~ 316 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDG-----NPEIYVMDLASRQLSRVTNHP--AIDTEPFWGKDGRTLYFTSDRGGKPQIYKV 316 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCC-----CceEEEEECCCCCeEEcccCC--CCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 3446788888777654333221 136889999988654433332 345678899997 44554 2 367778
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEcC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYIP 143 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~Ip 143 (248)
|..+|+.. .+... .......+|+|||+.|+..+. ++ .|.+|++.
T Consensus 317 d~~~g~~~-~lt~~-~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~ 363 (430)
T PRK00178 317 NVNGGRAE-RVTFV-GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQ 363 (430)
T ss_pred ECCCCCEE-EeecC-CCCccceEECCCCCEEEEEEccCCceEEEEEECC
Confidence 88888743 33321 222335689999998877764 33 35566643
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0042 Score=59.66 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=66.8
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKIWS 98 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKIWD 98 (248)
.....|+||+..++.+.+.++ ...|.+||+.+++......+. ..+....|+||+ +.+++ + ..|-++|
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g-----~~~Iy~~dl~tg~~~~lt~~~--~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDG-----QPEIYVVDIATKALTRITRHR--AIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCC-----CeEEEEEECCCCCeEECccCC--CCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 346788898877765433321 125888899988654443332 455778999997 44443 2 3566778
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~I 142 (248)
..+|+.. .+.. +.....+.+|+|||..|+..+. ++...+|-+
T Consensus 337 l~~g~~~-~Lt~-~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~ 379 (448)
T PRK04792 337 LASGKVS-RLTF-EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQ 379 (448)
T ss_pred CCCCCEE-EEec-CCCCCcCeeECCCCCEEEEEEecCCceEEEEE
Confidence 8877753 3322 0223345789999988877655 454555543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0041 Score=59.43 Aligned_cols=108 Identities=7% Similarity=0.094 Sum_probs=65.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEE--EcCC--CceeEEecCCCCCCeeEEEEcCCc--ee-eeC---CCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLY--DIRA--DKPLRVKDHMYGLPIRDIKFHDNY--VL-SMD---SSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~Lw--DlRs--~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssd---d~~ 93 (248)
.....+|+||+..++.+++.+ |...|| ++.. +.+.....+. ..+....|+||+ |+ ++. ...
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~-------g~~~ly~~~~~~~g~~~~~lt~~~--~~~~~p~wSPDG~~Laf~~~~~g~~~ 352 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKD-------GRPRIYIMQIDPEGQSPRLLTKKY--RNSSCPAWSPDGKKIAFCSVIKGVRQ 352 (428)
T ss_pred CcCCeEECCCCCEEEEEECCC-------CCceEEEEECcccccceEEeccCC--CCccceeECCCCCEEEEEEcCCCCcE
Confidence 345678999887666554432 344555 5542 2233222222 456788999998 33 333 247
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEE-EeCCCe--EEEEEc
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFI-ANENKK--ILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~s-a~ed~~--I~~w~I 142 (248)
|.+||..+|+.. .+..+ ...+.+..|+|||..|+. +..++. |..+++
T Consensus 353 I~v~dl~~g~~~-~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 353 ICVYDLATGRDY-QLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred EEEEECCCCCeE-EccCC-CCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 999999988764 34331 446678899999987764 444443 444443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0051 Score=57.68 Aligned_cols=124 Identities=10% Similarity=0.082 Sum_probs=81.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC-cee-eeecCCeeEEEEcCCCceeEEecCCC------CCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKI-LTYYIPAFYLYDIRADKPLRVKDHMY------GLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d-~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI~ 77 (248)
+|..+++.+.++..+. .. ..+ .+||+..+++++.- .++ -|-.+..|.+||+.+.+++....... +..-.
T Consensus 32 iD~~~~~v~g~i~~G~-~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~ 108 (352)
T TIGR02658 32 IDGEAGRVLGMTDGGF-LP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPW 108 (352)
T ss_pred EECCCCEEEEEEEccC-CC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccc
Confidence 6778899999998762 22 233 89998888877770 000 01112489999999999887654321 12234
Q ss_pred EEEEcCCc--ee-ee-C-CCeEEEEECCCCCEEEEeecCCCCC--------eeEEEEeCCCCEEEEEeCC
Q psy2083 78 DIKFHDNY--VL-SM-D-SSVVKIWSKDNGSLFTCIESGDQTQ--------FNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 78 sI~F~~d~--l~-Ss-d-d~~IKIWD~~tGk~~~tie~~h~~~--------In~l~~~pdsgll~sa~ed 134 (248)
...++||+ +. +. + +..|-+.|..+++.+..+.. +.. -+.+.+++||.++....++
T Consensus 109 ~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v--p~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~ 176 (352)
T TIGR02658 109 MTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV--PDCYHIFPTANDTFFMHCRDGSLAKVGYGT 176 (352)
T ss_pred eEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC--CCCcEEEEecCCccEEEeecCceEEEEecC
Confidence 78899997 33 33 4 88999999999999998875 222 2234445677666655543
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0018 Score=65.48 Aligned_cols=114 Identities=11% Similarity=0.211 Sum_probs=84.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
+.|.+.|+++.|+++|++|++||-++ ..-+|-+.++++..- -.-+.||..+.++||+ .+...|+.|.
T Consensus 248 HWH~~~V~~L~fS~~G~~LlSGG~E~--------VLv~Wq~~T~~kqfL--PRLgs~I~~i~vS~ds~~~sl~~~DNqI~ 317 (792)
T KOG1963|consen 248 HWHHDEVNSLSFSSDGAYLLSGGREG--------VLVLWQLETGKKQFL--PRLGSPILHIVVSPDSDLYSLVLEDNQIH 317 (792)
T ss_pred EecccccceeEEecCCceEeecccce--------EEEEEeecCCCcccc--cccCCeeEEEEEcCCCCeEEEEecCceEE
Confidence 33458999999999999999999986 789999999874332 2335899999999997 3345677777
Q ss_pred EEECCCCCEEEEeec---C-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 96 IWSKDNGSLFTCIES---G-------DQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~~tie~---~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-...+-....++.+ - ...=.+.+++.|-.+.++..+..+.|+.|+.
T Consensus 318 li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl 374 (792)
T KOG1963|consen 318 LIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDL 374 (792)
T ss_pred EEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEec
Confidence 776655444444443 0 0112346889998888888899999999974
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00031 Score=68.55 Aligned_cols=120 Identities=15% Similarity=0.242 Sum_probs=79.0
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c------eeEEecCCCCCCeeEEEEcCCc-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K------PLRVKDHMYGLPIRDIKFHDNY-V 86 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~------pl~~~~h~~~~pI~sI~F~~d~-l 86 (248)
.++-+| +..|..+...++....++++.|+ +|+||.+|.. . +..++ +.|..||++|.|..+. -
T Consensus 729 ~nf~GH-~~~iRai~AidNENSFiSASkDK--------TVKLWSik~EgD~~~tsaCQfTY-~aHkk~i~~igfL~~lr~ 798 (1034)
T KOG4190|consen 729 CNFTGH-QEKIRAIAAIDNENSFISASKDK--------TVKLWSIKPEGDEIGTSACQFTY-QAHKKPIHDIGFLADLRS 798 (1034)
T ss_pred ecccCc-HHHhHHHHhcccccceeeccCCc--------eEEEEEeccccCccccceeeeEh-hhccCcccceeeeeccce
Confidence 344454 67777777666555577777776 9999999974 1 22232 3455899999999987 3
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeC-CCCEEEEE-eCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIP-ESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~p-dsgll~sa-~ed~~I~~w~Ip~ 144 (248)
+.+-|+.|.+||+--|+++..++. .|.+.-|-.|+-. +..++.++ +...+|+.++...
T Consensus 799 i~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRs 860 (1034)
T KOG4190|consen 799 IASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARS 860 (1034)
T ss_pred eeeccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccc
Confidence 334456689999999998886652 2222222234422 66666666 5668898887543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0092 Score=63.37 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=72.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----C--------CCeeEEEEcCCc----eee
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----G--------LPIRDIKFHDNY----VLS 88 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~--------~pI~sI~F~~d~----l~S 88 (248)
..+++.|+++.++++...+ +.|++||..++.-......++ + ..-+.|+|+|++ ++.
T Consensus 686 ~gVa~dp~~g~LyVad~~~-------~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD 758 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQ-------HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD 758 (1057)
T ss_pred eEEEEecCCCeEEEEECCC-------CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE
Confidence 5788888777777665543 389999998764322111110 0 123568999986 344
Q ss_pred eCCCeEEEEECCCCCEEEEeec-----------C---------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIES-----------G---------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~-----------~---------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.++.|++||.++|......-+ + .-.....+++.|+|.++++-..+.+|++|+..
T Consensus 759 s~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~ 833 (1057)
T PLN02919 759 SESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPA 833 (1057)
T ss_pred CCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECC
Confidence 5688999999998764211100 0 00124588999999988888889999999863
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0006 Score=63.29 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=61.7
Q ss_pred CceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEcC---
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHD--- 83 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~--- 83 (248)
|-+.+.+-+. +.|+++.-.. +++.|++++-+ |+|+|||+|.-+. +.++. +-||..+..|
T Consensus 289 ~~~a~rlyh~--Ssvtslq~Lq~s~q~LmaS~M~--------gkikLyD~R~~K~~~~V~qYe----GHvN~~a~l~~~v 354 (425)
T KOG2695|consen 289 GWCAQRLYHD--SSVTSLQILQFSQQKLMASDMT--------GKIKLYDLRATKCKKSVMQYE----GHVNLSAYLPAHV 354 (425)
T ss_pred CcceEEEEcC--cchhhhhhhccccceEeeccCc--------CceeEeeehhhhcccceeeee----ccccccccccccc
Confidence 3444444443 5666666555 34556665555 4999999998655 55552 2244444333
Q ss_pred --C-c-eee-eCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEe
Q psy2083 84 --N-Y-VLS-MDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHI 122 (248)
Q Consensus 84 --d-~-l~S-sdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~ 122 (248)
. + |++ +||-..|||.+++|.++.++..- -...|.++||.
T Consensus 355 ~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 355 KEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 2 2 555 68999999999999999998741 02256667764
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0044 Score=56.02 Aligned_cols=123 Identities=12% Similarity=0.167 Sum_probs=71.7
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCce---eeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCceeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKK---ILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNYVLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~---~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~l~Ssdd~ 92 (248)
|..+...+|+++++.|...+|+++|.... .+..+.--+.-|=+=++.|.. ...+. ++.+.. ..+
T Consensus 142 f~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyy-----------k~v~~~~~~~~~-~~~ 209 (282)
T PF15492_consen 142 FSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYY-----------KQVTSSEDDITA-SSK 209 (282)
T ss_pred ecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcE-----------EEccccCccccc-ccc
Confidence 33445678999999998888777766531 000000011223222222211 11111 111211 111
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcc
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWC 152 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wc 152 (248)
+-.+|..-+.+.+..... ....|-.|.++|||.+|++..-+|+|.+|.||.|-.--+|-
T Consensus 210 ~~~~~~~~~~~~fs~~~~-~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 210 RRGLLRIPSFKFFSRQGQ-EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred ccceeeccceeeeecccc-CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 223454444444332222 25788999999999999999999999999999999988887
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0031 Score=58.03 Aligned_cols=110 Identities=8% Similarity=0.182 Sum_probs=83.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEe-cCCCCCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVK-DHMYGLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~-~h~~~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
..|++-++.+|...++.+.... .|.||...... +..+. +|. ..|+.|.|.|.. |+ ++.|+.--
T Consensus 11 ~pitchAwn~drt~iAv~~~~~--------evhiy~~~~~~~w~~~htls~Hd--~~vtgvdWap~snrIvtcs~drnay 80 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPNNH--------EVHIYSMLGADLWEPAHTLSEHD--KIVTGVDWAPKSNRIVTCSHDRNAY 80 (361)
T ss_pred CceeeeeecCCCceEEeccCCc--------eEEEEEecCCCCceeceehhhhC--cceeEEeecCCCCceeEccCCCCcc
Confidence 5788999999887777766665 79999998875 34443 454 899999999987 54 56788888
Q ss_pred EEEC-CCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 96 IWSK-DNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 96 IWD~-~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+|.. ..|+=..++.- .+....+++.++|+++.+++|+-.+.|.+||.
T Consensus 81 Vw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 81 VWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred ccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 9998 43432222221 12567889999999999999999999999985
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0029 Score=61.98 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=55.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
.+.|.+++++|+...++.|+.|+ +|.|||.+.+.-..++. ....+.|+|||++ +++++.|.+.+||
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~Dg--------SiiLyD~~~~~t~~~ka---~~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDG--------SIILYDTTRGVTLLAKA---EFIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred CCcceEEecCcccceEEEEecCC--------eEEEEEcCCCeeeeeee---cccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 47889999999888888888885 99999998874444432 2667899999998 6667889999999
Q ss_pred CCC
Q psy2083 99 KDN 101 (248)
Q Consensus 99 ~~t 101 (248)
..-
T Consensus 328 ~AL 330 (545)
T PF11768_consen 328 MAL 330 (545)
T ss_pred eec
Confidence 864
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.029 Score=51.79 Aligned_cols=113 Identities=15% Similarity=0.240 Sum_probs=75.5
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeE---EecC---------CCCCCeeEEEEcCCc--eee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLR---VKDH---------MYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~---~~~h---------~~~~pI~sI~F~~d~--l~S 88 (248)
....++..|++.+++++.-.+ |+|.+|++... ++.. ...| +-+.-..++.|+|++ +..
T Consensus 88 ~p~~i~~~~~g~~l~vany~~-------g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYVANYGG-------GSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred CcEEEEEecCCCEEEEEEccC-------CeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 445677788888888887654 69999999984 3222 1111 122446799999997 555
Q ss_pred eC--CCeEEEEECCCCC--E--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcC
Q psy2083 89 MD--SSVVKIWSKDNGS--L--FTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYIP 143 (248)
Q Consensus 89 sd--d~~IKIWD~~tGk--~--~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip 143 (248)
+| ...|.+++.+.+. + ...+........+.++|+||+..+++.++- ++|.+|.++
T Consensus 161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 43 4478898887654 3 223332114778999999999999988875 789999887
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0014 Score=60.29 Aligned_cols=153 Identities=18% Similarity=0.291 Sum_probs=96.7
Q ss_pred CeeEEEEeCCCCc-EE-EeecCceeeeecCCeeEEEEcCCC-------------------cee-----------------
Q psy2083 24 QFNNLCHIPESGM-MF-IANENKKILTYYIPAFYLYDIRAD-------------------KPL----------------- 65 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~-~ag~d~~~~~~~~G~V~LwDlRs~-------------------~pl----------------- 65 (248)
.|+.+.++.++|. -| .++.|. +|+||-++.. .|+
T Consensus 87 Kin~I~w~~~t~r~hFLlstNdk--------tiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~i 158 (460)
T COG5170 87 KINAIEWFDDTGRNHFLLSTNDK--------TIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEI 158 (460)
T ss_pred HhhheeeecCCCcceEEEecCCc--------eeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceE
Confidence 5788999988776 33 444454 9999999865 111
Q ss_pred ------EEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCC---EEEEeecCCC-----CCeeEEEEeCCC-CEE
Q psy2083 66 ------RVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGS---LFTCIESGDQ-----TQFNNLCHIPES-GMM 128 (248)
Q Consensus 66 ------~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk---~~~tie~~h~-----~~In~l~~~pds-gll 128 (248)
.++...|..-|++|+|+.|. ++|+||=.|.+|+++--. .+..+.| |. .-|++..|+|.- .++
T Consensus 159 iaa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP-~nmeeLteVItSaeFhp~~cn~f 237 (460)
T COG5170 159 IAAKPCRVYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKP-HNMEELTEVITSAEFHPEMCNVF 237 (460)
T ss_pred EEeccceeccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccC-ccHHHHHHHHhhcccCHhHcceE
Confidence 11222333568999999887 999999999999987422 2334556 23 258999999965 555
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-------ccccccCCceeecH------hHHhhcCCcc
Q psy2083 129 FIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-------IIENVYDDYKFVTR------QELEDLGLGH 189 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-------~~~~~yd~y~fvt~------~~l~~l~~~~ 189 (248)
+-.+..|.|++-++.+- .-|..--.+.|+.++. ....--.|+||+.. .++-.+.+|.
T Consensus 238 mYSsSkG~Ikl~DlRq~----alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwD 307 (460)
T COG5170 238 MYSSSKGEIKLNDLRQS----ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWD 307 (460)
T ss_pred EEecCCCcEEehhhhhh----hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEe
Confidence 66667899999998741 1233333444444432 12334567777653 3444555543
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.012 Score=50.08 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=78.5
Q ss_pred ccchhcCceeEEEecCC-CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEE-EEc
Q psy2083 5 ELRQDKGSLFTCIESGD-QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDI-KFH 82 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~-~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI-~F~ 82 (248)
-+|+.+|+.+-...-.. .+.... ...++++.+++++.++ .+..||+.+++.++.+.-. .++... ...
T Consensus 7 ~~d~~tG~~~W~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~--------~l~~~d~~tG~~~W~~~~~--~~~~~~~~~~ 75 (238)
T PF13360_consen 7 ALDPRTGKELWSYDLGPGIGGPVA-TAVPDGGRVYVASGDG--------NLYALDAKTGKVLWRFDLP--GPISGAPVVD 75 (238)
T ss_dssp EEETTTTEEEEEEECSSSCSSEEE-TEEEETTEEEEEETTS--------EEEEEETTTSEEEEEEECS--SCGGSGEEEE
T ss_pred EEECCCCCEEEEEECCCCCCCccc-eEEEeCCEEEEEcCCC--------EEEEEECCCCCEEEEeecc--ccccceeeec
Confidence 36888899888875421 011111 1333567777775554 8999999999998887643 333332 333
Q ss_pred CCc-eeeeCCCeEEEEECCCCCEEEEe-ecCC-CCC-eeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 83 DNY-VLSMDSSVVKIWSKDNGSLFTCI-ESGD-QTQ-FNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 83 ~d~-l~Ssdd~~IKIWD~~tGk~~~ti-e~~h-~~~-In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.+. ++.+.++.|..+|..+|+.+-.+ .... ... ........+++.++++..++.|..+++.
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 140 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPK 140 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETT
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecC
Confidence 333 44556779999999999998884 3310 111 1122333347777888878888777744
|
... |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0079 Score=55.66 Aligned_cols=88 Identities=10% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
+|.|..+|..++++++......+..+.+.....+. ++.+.++.|.+||.++|+.+.++..+ ...+..--...++ .|+
T Consensus 288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~-~~~~~~sp~~~~~-~l~ 365 (377)
T TIGR03300 288 DGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTD-GSGIASPPVVVGD-GLL 365 (377)
T ss_pred CCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcC-CCccccCCEEECC-EEE
Confidence 35899999999988876522111122222223333 44567899999999999999998862 3344432223344 488
Q ss_pred EEeCCCeEEEE
Q psy2083 130 IANENKKILTY 140 (248)
Q Consensus 130 sa~ed~~I~~w 140 (248)
+++.|++|..+
T Consensus 366 v~~~dG~l~~~ 376 (377)
T TIGR03300 366 VQTRDGDLYAF 376 (377)
T ss_pred EEeCCceEEEe
Confidence 99999998765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.032 Score=51.50 Aligned_cols=112 Identities=13% Similarity=0.289 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCce--eEEec---CCCC--CCeeEEEEcCCc--eee--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKP--LRVKD---HMYG--LPIRDIKFHDNY--VLS--M 89 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~p--l~~~~---h~~~--~pI~sI~F~~d~--l~S--s 89 (248)
..-..++|+|++..++++++.+ ++|.+|++. .+.. +.... .... ..-..|.++||+ |.. .
T Consensus 192 ~GPRh~~f~pdg~~~Yv~~e~s-------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr 264 (345)
T PF10282_consen 192 SGPRHLAFSPDGKYAYVVNELS-------NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNR 264 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEETTT-------TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEEC
T ss_pred CCCcEEEEcCCcCEEEEecCCC-------CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEec
Confidence 4567899999888888888775 489999998 3422 22221 1111 146789999998 333 3
Q ss_pred CCCeEEEEEC--CCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEc
Q psy2083 90 DSSVVKIWSK--DNGSL--FTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYI 142 (248)
Q Consensus 90 dd~~IKIWD~--~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~I 142 (248)
...+|-++++ .+|++ +..+..+ ....++++++|+|.+|++++++ +.|.+|.+
T Consensus 265 ~~~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 265 GSNSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp TTTEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred cCCEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 5779999998 34543 2233331 3457899999999999999865 68999987
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0025 Score=60.18 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=71.9
Q ss_pred eEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEE
Q psy2083 54 FYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMM 128 (248)
Q Consensus 54 V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll 128 (248)
|+..+--+-+++. ..++++..|++++|+|.. .+.+-++.|||.|.++...+.++.. ...+.++||.-|. ..|
T Consensus 175 v~~l~~~~fkssq-~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a--~~~~wSC~wDlde~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSSQ-ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIA--YNQIWSCCWDLDERHVI 251 (463)
T ss_pred eEEeccCCcchhh-cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheec--cCCceeeeeccCCccee
Confidence 5666655556654 557778999999999975 3446789999999999999999988 5899999998755 788
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
..|...|.|.+||+..
T Consensus 252 YaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQ 267 (463)
T ss_pred EEeccCceEEEEEccC
Confidence 8888999999999865
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.02 Score=53.28 Aligned_cols=130 Identities=17% Similarity=0.262 Sum_probs=89.8
Q ss_pred cccccchhcCceeEE---EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cc---eeEEecCCCCC
Q psy2083 2 AAQELRQDKGSLFTC---IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DK---PLRVKDHMYGL 74 (248)
Q Consensus 2 ~~~~~~~~~G~~~~~---~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~---pl~~~~h~~~~ 74 (248)
||-++|..+|++-.- ...+ +.-.-++..+++..+++++-.. |.|.++-++. |. ++....|. .
T Consensus 67 aay~iD~~~G~Lt~ln~~~~~g--~~p~yvsvd~~g~~vf~AnY~~-------g~v~v~p~~~dG~l~~~v~~~~h~--g 135 (346)
T COG2706 67 AAYRIDPDDGRLTFLNRQTLPG--SPPCYVSVDEDGRFVFVANYHS-------GSVSVYPLQADGSLQPVVQVVKHT--G 135 (346)
T ss_pred EEEEEcCCCCeEEEeeccccCC--CCCeEEEECCCCCEEEEEEccC-------ceEEEEEcccCCccccceeeeecC--C
Confidence 455577776773222 1122 1226777788777888887765 6999999987 43 23334444 3
Q ss_pred C----------eeEEEEcCCc--eeeeCCC--eEEEEECCCCCEEEE----eecCCCCCeeEEEEeCCCCEEEEEeC-CC
Q psy2083 75 P----------IRDIKFHDNY--VLSMDSS--VVKIWSKDNGSLFTC----IESGDQTQFNNLCHIPESGMMFIANE-NK 135 (248)
Q Consensus 75 p----------I~sI~F~~d~--l~Ssdd~--~IKIWD~~tGk~~~t----ie~~h~~~In~l~~~pdsgll~sa~e-d~ 135 (248)
+ +....|.|++ |++.|-+ .|.+++.+.|++... +.+ .+..+.+.|+||+.+..+.+| ++
T Consensus 136 ~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~--G~GPRHi~FHpn~k~aY~v~EL~s 213 (346)
T COG2706 136 SGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKP--GAGPRHIVFHPNGKYAYLVNELNS 213 (346)
T ss_pred CCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCC--CCCcceEEEcCCCcEEEEEeccCC
Confidence 3 8889999998 6666633 466999998875332 334 467899999999999999997 78
Q ss_pred eEEEEEcCC
Q psy2083 136 KILTYYIPS 144 (248)
Q Consensus 136 ~I~~w~Ip~ 144 (248)
+|.+|.+..
T Consensus 214 tV~v~~y~~ 222 (346)
T COG2706 214 TVDVLEYNP 222 (346)
T ss_pred EEEEEEEcC
Confidence 999997543
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.011 Score=55.48 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=67.7
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee---------CCCeEEEEECCCCCEEEEeecC-C-----
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM---------DSSVVKIWSKDNGSLFTCIESG-D----- 112 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss---------dd~~IKIWD~~tGk~~~tie~~-h----- 112 (248)
|+|.+.|..+.+-+-...-+.. |- .+ ++||+ ++++ ++..|.+||..+++.+..+... .
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~-P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~ 103 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFL-PN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV 103 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCC-Cc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence 4899999999887766554432 22 24 99996 6667 7899999999999999999841 0
Q ss_pred CCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANEN--KKILTYYIPS 144 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip~ 144 (248)
....+.++++|||..|++++++ ..|.+.|+.+
T Consensus 104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~ 137 (352)
T TIGR02658 104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG 137 (352)
T ss_pred cCccceEEECCCCCEEEEecCCCCCEEEEEECCC
Confidence 1123478999999999999854 7788887543
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0043 Score=57.64 Aligned_cols=81 Identities=12% Similarity=0.249 Sum_probs=60.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
..++++.+| .+.++.+++.|..+.+|++.+|. .|.+|||--++-......+|...|..+..-+.. +.|
T Consensus 188 ~~i~~~~~h-~~~~~~l~Wd~~~~~LfSg~~d~--------~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~ 258 (404)
T KOG1409|consen 188 QLITTFNGH-TGEVTCLKWDPGQRLLFSGASDH--------SVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISC 258 (404)
T ss_pred ceEEEEcCc-ccceEEEEEcCCCcEEEeccccC--------ceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeec
Confidence 356666666 89999999999999999998887 799999976654444333444678888776654 555
Q ss_pred eCCCeEEEEECCC
Q psy2083 89 MDSSVVKIWSKDN 101 (248)
Q Consensus 89 sdd~~IKIWD~~t 101 (248)
..|+.|-+||.+.
T Consensus 259 ~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 259 GEDGGIVVWNMNV 271 (404)
T ss_pred cCCCeEEEEeccc
Confidence 4699999999763
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0029 Score=58.80 Aligned_cols=171 Identities=18% Similarity=0.265 Sum_probs=111.1
Q ss_pred CeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC--ce---------------------------------eEE
Q psy2083 24 QFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD--KP---------------------------------LRV 67 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~--~p---------------------------------l~~ 67 (248)
.|+.+.+.++++. .|..+..++ +|+||-++.. ++ ..+
T Consensus 86 KinkIrw~~~~n~a~FLlstNdk-------tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv 158 (433)
T KOG1354|consen 86 KINKIRWLDDGNLAEFLLSTNDK-------TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRV 158 (433)
T ss_pred hhhhceecCCCCccEEEEecCCc-------ceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeee
Confidence 6788999887666 554444433 9999998764 22 223
Q ss_pred ecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCE--EEEeecCCC-----CCeeEEEEeCCC-CEEEEEeCCCe
Q psy2083 68 KDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSL--FTCIESGDQ-----TQFNNLCHIPES-GMMFIANENKK 136 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~--~~tie~~h~-----~~In~l~~~pds-gll~sa~ed~~ 136 (248)
+.+.|..-|++|+++.|. .+|+||=.|.+|+++- .+. +.-+.| +. .-|++..|+|.. .+++=.+..|+
T Consensus 159 ~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP-~nmEeLteVITsaEFhp~~cn~f~YSSSKGt 237 (433)
T KOG1354|consen 159 YANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKP-ANMEELTEVITSAEFHPHHCNVFVYSSSKGT 237 (433)
T ss_pred ccccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEccc-cCHHHHHHHHhhhccCHhHccEEEEecCCCc
Confidence 456666789999999997 9999999999999873 222 334445 12 258899999965 66666777899
Q ss_pred EEEEEcCCCCCCCCccccccchhhhhhcccc-------ccccCCceeecH------hHHhhcCCccc-cCC-Ccccccce
Q psy2083 137 ILTYYIPSLGPAPKWCGFLDNLTEELEENII-------ENVYDDYKFVTR------QELEDLGLGHL-IGT-SLLRAYMH 201 (248)
Q Consensus 137 I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~-------~~~yd~y~fvt~------~~l~~l~~~~l-igt-~~l~~ymh 201 (248)
|++-|..+ ..-|.---.+.||-|.... ..--.|.||.-. .+.-.+.+|.| ..+ |.----||
T Consensus 238 IrLcDmR~----~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 238 IRLCDMRQ----SALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred EEEeechh----hhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeeh
Confidence 99999874 2235555566676665421 222456666553 45666777765 333 33333366
Q ss_pred eeeec
Q psy2083 202 GFFMD 206 (248)
Q Consensus 202 gyf~~ 206 (248)
-|..+
T Consensus 314 ~~lr~ 318 (433)
T KOG1354|consen 314 EYLRS 318 (433)
T ss_pred HhHHH
Confidence 55543
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.019 Score=52.09 Aligned_cols=109 Identities=13% Similarity=0.148 Sum_probs=77.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE----e---cCCCCCCeeEEEEcCCc---eeeeCCCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV----K---DHMYGLPIRDIKFHDNY---VLSMDSSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~---~h~~~~pI~sI~F~~d~---l~Ssdd~~ 93 (248)
.++++.+++|+.++.++|+.. .|-+|-|-....... . ||+ -+.+|+... .+..-|++
T Consensus 160 ~~ns~~~snd~~~~~~Vgds~--------~Vf~y~id~~sey~~~~~~a~t~D~g-----F~~S~s~~~~~FAv~~Qdg~ 226 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGDSR--------RVFRYAIDDESEYIENIYEAPTSDHG-----FYNSFSENDLQFAVVFQDGT 226 (344)
T ss_pred ceeeeEEcCCCceEEEecCCC--------cceEEEeCCccceeeeeEecccCCCc-----eeeeeccCcceEEEEecCCc
Confidence 488999999999888888886 799999876532221 1 333 677788765 55568999
Q ss_pred EEEEECCC-CCEEEEe---ecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCCC
Q psy2083 94 VKIWSKDN-GSLFTCI---ESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 94 IKIWD~~t-Gk~~~ti---e~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~l 145 (248)
+-|||+++ +.+...+ .|+|...|+.+.|+|-| .+|+..---+.+++-|...+
T Consensus 227 ~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~ 284 (344)
T KOG4532|consen 227 CAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNY 284 (344)
T ss_pred EEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccC
Confidence 99999987 4444333 34578899999999866 34554444578888886554
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.02 Score=54.77 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=66.2
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--ee-eeC-CCeEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VL-SMD-SSVVKIW 97 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssd-d~~IKIW 97 (248)
.....|+||+..|+.+++.. |..+..+.+||+..+ ++....... ........|+||+ |+ +++ ++...||
T Consensus 233 ~~~p~wSPDG~~Laf~s~~~---g~~di~~~~~~~~~g~~g~~~~lt~~~-~~~~~~p~wSPDG~~Laf~s~~~g~~~ly 308 (428)
T PRK01029 233 QLMPTFSPRKKLLAFISDRY---GNPDLFIQSFSLETGAIGKPRRLLNEA-FGTQGNPSFSPDGTRLVFVSNKDGRPRIY 308 (428)
T ss_pred ccceEECCCCCEEEEEECCC---CCcceeEEEeecccCCCCcceEeecCC-CCCcCCeEECCCCCEEEEEECCCCCceEE
Confidence 34567889887776554321 112335666888763 443333221 1234678999997 33 443 5555666
Q ss_pred E--CCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEcC
Q psy2083 98 S--KDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYIP 143 (248)
Q Consensus 98 D--~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~Ip 143 (248)
. ... |.....+.. +...+.+.+|+|||..|+..+.+ ..|.+|++.
T Consensus 309 ~~~~~~~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 309 IMQIDPEGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred EEECcccccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 4 332 333444544 24566788999999987766543 367788764
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.058 Score=46.90 Aligned_cols=101 Identities=18% Similarity=0.283 Sum_probs=69.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-e---EEe-cCCCCC-CeeEEEEcCCc-eee--eCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-L---RVK-DHMYGL-PIRDIKFHDNY-VLS--MDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l---~~~-~h~~~~-pI~sI~F~~d~-l~S--sdd~~ 93 (248)
...|.++|+|++..|+.+.+.. +.|.-||+..... + ... +..... ..-.+++..++ |.. ...+.
T Consensus 134 ~~pNGi~~s~dg~~lyv~ds~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~ 206 (246)
T PF08450_consen 134 GFPNGIAFSPDGKTLYVADSFN-------GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGR 206 (246)
T ss_dssp SSEEEEEEETTSSEEEEEETTT-------TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTE
T ss_pred ccccceEECCcchheeeccccc-------ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCE
Confidence 4679999999988777665554 4899999975322 1 111 111111 25679999887 333 37889
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEe
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIAN 132 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ 132 (248)
|.++|.+ |+.+..+... ...++++||. |+.+.|++.+
T Consensus 207 I~~~~p~-G~~~~~i~~p-~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 207 IVVFDPD-GKLLREIELP-VPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEETT-SCEEEEEE-S-SSSEEEEEEESTTSSEEEEEE
T ss_pred EEEECCC-ccEEEEEcCC-CCCEEEEEEECCCCCEEEEEe
Confidence 9999998 9999999861 3689999994 7777776654
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.01 Score=60.09 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=73.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCC----------CcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPES----------GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI 76 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~----------g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI 76 (248)
|..+-+.+++++.| ++.|+.+.+.|.. ..+..+++|- .|.|-|||.+.+..+....|. ..||
T Consensus 41 Ds~s~q~iqsie~h-~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~------~GrIil~d~~~~s~~~~l~~~-~~~~ 112 (1062)
T KOG1912|consen 41 DSRSLQLIQSIELH-QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI------SGRIILVDFVLASVINWLSHS-NDSV 112 (1062)
T ss_pred ehhhhhhhhccccC-ccceeEEEeccCCCchhccCccccceeEEeccc------cCcEEEEEehhhhhhhhhcCC-Ccch
Confidence 45566778888887 7999999998732 2233334442 389999999998665555443 4789
Q ss_pred eEEEEcCCc-----ee--eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 77 RDIKFHDNY-----VL--SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 77 ~sI~F~~d~-----l~--Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p 123 (248)
..++|-+.. ++ -....+|-+|+..+|+.+-...-. .....|+.+.|
T Consensus 113 qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys-~~iLs~f~~DP 165 (1062)
T KOG1912|consen 113 QDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS-HEILSCFRVDP 165 (1062)
T ss_pred hheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC-CcceeeeeeCC
Confidence 999987642 22 245678889999999988776651 23334456655
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0017 Score=59.72 Aligned_cols=143 Identities=13% Similarity=0.290 Sum_probs=89.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeE---EecCCCC---CCeeEEEEcCCc----eee
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLR---VKDHMYG---LPIRDIKFHDNY----VLS 88 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~---~~~h~~~---~pI~sI~F~~d~----l~S 88 (248)
.|.=.++++.|.+|...++++ ++- .|-||.+.-. ..+. ++.|.+. .-|++..|||.. ..|
T Consensus 170 aH~yhiNSiS~NsD~et~lSa-DdL--------rINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS 240 (460)
T COG5170 170 AHPYHINSISFNSDKETLLSA-DDL--------RINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS 240 (460)
T ss_pred cceeEeeeeeecCchheeeec-cce--------eeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEe
Confidence 345678899988877666554 443 6999998764 2222 3445432 368999999985 567
Q ss_pred eCCCeEEEEECCCCC-------EEE-Eeec-------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC----CCCC
Q psy2083 89 MDSSVVKIWSKDNGS-------LFT-CIES-------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL----GPAP 149 (248)
Q Consensus 89 sdd~~IKIWD~~tGk-------~~~-tie~-------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l----G~aP 149 (248)
+..|.||+-|.+... .+. ++.+ +-...|.++.|+|+|.+|++-. =-++++|++..- -..|
T Consensus 241 sSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~ 319 (460)
T COG5170 241 SSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIP 319 (460)
T ss_pred cCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeec
Confidence 889999999998321 110 1111 0135788999999999886543 478999998653 2233
Q ss_pred CccccccchhhhhhccccccccCCce
Q psy2083 150 KWCGFLDNLTEELEENIIENVYDDYK 175 (248)
Q Consensus 150 ~wcs~ld~~tee~e~~~~~~~yd~y~ 175 (248)
--|.-.|.|-.-+| ...|||-|.
T Consensus 320 ~h~~l~~~l~d~YE---nDaifdkFe 342 (460)
T COG5170 320 MHCDLMDELNDVYE---NDAIFDKFE 342 (460)
T ss_pred hHHHHHHHHHhhhh---ccceeeeEE
Confidence 33333333333333 355666554
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0027 Score=58.84 Aligned_cols=104 Identities=13% Similarity=0.210 Sum_probs=74.1
Q ss_pred EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEECCCC
Q psy2083 27 NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWSKDNG 102 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD~~tG 102 (248)
-++|+|+|.++++++.. .+.+=|..+-+-++.+.-- ..|.-|.|..|. ++++ -+..|.+|++..-
T Consensus 13 ~c~fSp~g~yiAs~~~y---------rlviRd~~tlq~~qlf~cl--dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qp 81 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY---------RLVIRDSETLQLHQLFLCL--DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQP 81 (447)
T ss_pred ceeECCCCCeeeeeeee---------EEEEeccchhhHHHHHHHH--HHhhheeeeccceeeeeeeeccceEEEEEeecc
Confidence 56778877767666555 5777676664332222111 357788898887 5553 4669999999988
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEc
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYI 142 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~I 142 (248)
+-...|+-+ ++++.+.+++|||.-|+ +..=|-+|.+|.+
T Consensus 82 ew~ckIdeg-~agls~~~WSPdgrhiL~tseF~lriTVWSL 121 (447)
T KOG4497|consen 82 EWYCKIDEG-QAGLSSISWSPDGRHILLTSEFDLRITVWSL 121 (447)
T ss_pred eeEEEeccC-CCcceeeeECCCcceEeeeecceeEEEEEEe
Confidence 888888864 89999999999995554 4455889999874
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0042 Score=64.59 Aligned_cols=86 Identities=12% Similarity=0.314 Sum_probs=62.7
Q ss_pred CCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEE---eC
Q psy2083 51 IPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH---IP 123 (248)
Q Consensus 51 ~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~---~p 123 (248)
-|+|.+.|++.. +|+..-++. ++||++++|+.++ ++.+ .+|.|.+||..++++++.+.- |.++...+-+ ..
T Consensus 108 ~ghvl~~d~~~nL~~~~~ne~v-~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e-~~ap~t~vi~v~~t~ 185 (1206)
T KOG2079|consen 108 HGHVLLSDMTGNLGPLHQNERV-QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE-HGAPVTGVIFVGRTS 185 (1206)
T ss_pred chhhhhhhhhcccchhhcCCcc-CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee-cCCccceEEEEEEeC
Confidence 369999999985 564443333 5899999999998 4444 689999999999999998876 3555555443 23
Q ss_pred CCCEEEEEeCCCeEE
Q psy2083 124 ESGMMFIANENKKIL 138 (248)
Q Consensus 124 dsgll~sa~ed~~I~ 138 (248)
++..++++...|.+.
T Consensus 186 ~nS~llt~D~~Gsf~ 200 (1206)
T KOG2079|consen 186 QNSKLLTSDTGGSFW 200 (1206)
T ss_pred CCcEEEEccCCCceE
Confidence 444777777777643
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.01 Score=55.14 Aligned_cols=99 Identities=10% Similarity=0.118 Sum_probs=71.6
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKD 100 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~ 100 (248)
|+-+-+.-|+..++.+-.- +|.|.+|++..+.-....+.+ ..++.+++|+||+ +.++ -+-.|.+|...
T Consensus 51 i~yieW~ads~~ilC~~yk-------~~~vqvwsl~Qpew~ckIdeg-~agls~~~WSPdgrhiL~tseF~lriTVWSL~ 122 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYK-------DPKVQVWSLVQPEWYCKIDEG-QAGLSSISWSPDGRHILLTSEFDLRITVWSLN 122 (447)
T ss_pred hhheeeeccceeeeeeeec-------cceEEEEEeecceeEEEeccC-CCcceeeeECCCcceEeeeecceeEEEEEEec
Confidence 3444555566555544333 369999999987665555544 4789999999998 4444 47788999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
|.+...---+ ...+..++|+|||.+.+.++.
T Consensus 123 t~~~~~~~~p--K~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 123 TQKGYLLPHP--KTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred cceeEEeccc--ccCceeEEECCCCceeeeeec
Confidence 8776554444 567789999999999888874
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.018 Score=52.21 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=62.5
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEE----ecCCCCCCeeEEEEcCCc----eeee-CCCeEEEEECCCCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRV----KDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIWSKDNGS 103 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~----~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIWD~~tGk 103 (248)
...+|+++..+ |++.+||+|.- .|... ++| |.+.|+.+.|++-+ +.-+ .-.-+.+-|.++++
T Consensus 214 ~~~~FAv~~Qd-------g~~~I~DVR~~~tpm~~~sstrp~-hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 214 NDLQFAVVFQD-------GTCAIYDVRNMATPMAEISSTRPH-HNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred CcceEEEEecC-------CcEEEEEecccccchhhhcccCCC-CCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 44556555554 69999999984 56543 455 55799999999765 3334 45678999999999
Q ss_pred EEEEeecC------CC-CCeeEEEEeCCCCEEEEEeCC
Q psy2083 104 LFTCIESG------DQ-TQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 104 ~~~tie~~------h~-~~In~l~~~pdsgll~sa~ed 134 (248)
..+.+-+- |. ..|...+|+.++.-+.+++++
T Consensus 286 ~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~ 323 (344)
T KOG4532|consen 286 NHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL 323 (344)
T ss_pred eeeEEecCccccccccccccccccccCCCcccccccch
Confidence 88877640 11 235566676666666666654
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0064 Score=55.48 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=61.4
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc---eee-eCCCeEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IK 95 (248)
+-..+++.|+...-. ++++|+| |.+.-||+|.++. ++.-..-|...|.+|.=+|.. |++ +-|..|+
T Consensus 165 e~E~Wta~f~~~~pnlvytGgDD--------~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~ 236 (339)
T KOG0280|consen 165 EFEAWTAKFSDKEPNLVYTGGDD--------GSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIR 236 (339)
T ss_pred ceeeeeeecccCCCceEEecCCC--------ceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEecccccee
Confidence 567788888765444 4455555 3899999996643 333122333789999988774 554 5788999
Q ss_pred EEECCC-CCEEEEeecCCCCCeeEEEEeC
Q psy2083 96 IWSKDN-GSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 96 IWD~~t-Gk~~~tie~~h~~~In~l~~~p 123 (248)
+||.++ |+++..-.. ...|.-++.+|
T Consensus 237 ~~DtRnm~kPl~~~~v--~GGVWRi~~~p 263 (339)
T KOG0280|consen 237 VLDTRNMGKPLFKAKV--GGGVWRIKHHP 263 (339)
T ss_pred eeehhcccCccccCcc--ccceEEEEecc
Confidence 999994 777654332 34566666666
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.013 Score=56.24 Aligned_cols=104 Identities=17% Similarity=0.272 Sum_probs=76.3
Q ss_pred CCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEEECCC------CCEEEEeec--------CC
Q psy2083 51 IPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIWSKDN------GSLFTCIES--------GD 112 (248)
Q Consensus 51 ~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIWD~~t------Gk~~~tie~--------~h 112 (248)
+|.|-++|-+.. .|...+.-.|-.||..+.+++.+ ++|.| .+.|.-|..+- ++....+.. .-
T Consensus 121 sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~ 200 (558)
T KOG0882|consen 121 SGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKA 200 (558)
T ss_pred CCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccccc
Confidence 479999999986 35555444445999999999987 66655 78999999872 211111110 01
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN 165 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~ 165 (248)
.....+++|+|+|..+.+-++|.+|.++.. --..+.+|+||.
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~-----------KtGklvqeiDE~ 242 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVF-----------KTGKLVQEIDEV 242 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEe-----------ccchhhhhhhcc
Confidence 456789999999999999999999999964 356788888886
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0046 Score=35.29 Aligned_cols=39 Identities=15% Similarity=0.373 Sum_probs=29.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD 58 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD 58 (248)
++++..+..+ .+.|+.+++.+.+..+++++.++ .|++||
T Consensus 2 ~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~d~--------~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGH-TGPVTSVAFSPDGKYLASASDDG--------TIKLWD 40 (40)
T ss_pred cEEEEEEEec-CCceeEEEECCCCCEEEEecCCC--------eEEEcC
Confidence 4566666655 67899999998776666766664 899997
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.12 Score=44.80 Aligned_cols=108 Identities=14% Similarity=0.152 Sum_probs=71.5
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEec-CC-CCCCeeEEEEcCCc-ee--eeCC------
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKD-HM-YGLPIRDIKFHDNY-VL--SMDS------ 91 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~-h~-~~~pI~sI~F~~d~-l~--Ssdd------ 91 (248)
.+.+++..++|.++.+... .+.++|+.+++ ++.... .. .....|.+++.+++ +. .+..
T Consensus 42 ~~G~~~~~~~g~l~v~~~~---------~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~ 112 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVADSG---------GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGI 112 (246)
T ss_dssp EEEEEEECTTSEEEEEETT---------CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCG
T ss_pred CceEEEEccCCEEEEEEcC---------ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccc
Confidence 6778887445667776665 36777999984 333331 11 23568899999998 22 2222
Q ss_pred --CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 92 --SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 92 --~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
+.|-.++.. |+.....+. -...|.++|+||+..|+++ +..++|..|++-.
T Consensus 113 ~~g~v~~~~~~-~~~~~~~~~--~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~ 165 (246)
T PF08450_consen 113 DPGSVYRIDPD-GKVTVVADG--LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDA 165 (246)
T ss_dssp GSEEEEEEETT-SEEEEEEEE--ESSEEEEEEETTSSEEEEEETTTTEEEEEEEET
T ss_pred cccceEEECCC-CeEEEEecC--cccccceEECCcchheeecccccceeEEEeccc
Confidence 346667777 665555554 5678999999999877654 5668899888754
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.11 Score=49.73 Aligned_cols=114 Identities=8% Similarity=0.042 Sum_probs=69.8
Q ss_pred CeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEEE
Q psy2083 24 QFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVKI 96 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IKI 96 (248)
....-.|+||+.. ++.++..++ ...|.++|+.++++....... ..+....|+||+ +.+. .+..|-+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~-----~~~Iyv~dl~tg~~~~lt~~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~ 261 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGER-----KPTLYKYNLYTGKKEKIASSQ--GMLVVSDVSKDGSKLLLTMAPKGQPDIYL 261 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCC-----CCEEEEEECCCCcEEEEecCC--CcEEeeEECCCCCEEEEEEccCCCcEEEE
Confidence 4567888898775 554444321 248999999998765544322 445567899997 3332 2346777
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLG 146 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG 146 (248)
+|..+|+ ...+..+ ...-....|+|||..|+..+ ..+.-.+|-++.-|
T Consensus 262 ~dl~~g~-~~~LT~~-~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~ 310 (419)
T PRK04043 262 YDTNTKT-LTQITNY-PGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS 310 (419)
T ss_pred EECCCCc-EEEcccC-CCccCccEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 8988776 4455541 33223568999997555554 44555555554433
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.24 Score=39.09 Aligned_cols=100 Identities=9% Similarity=0.159 Sum_probs=66.0
Q ss_pred CeeEEEEeCC---CCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 24 QFNNLCHIPE---SGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~---~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
+|+++|+++- +.. |+++++|- .||+|+=.. .+....-. ..|.++.-.... ..+..+++|.++
T Consensus 1 ~V~al~~~d~d~dg~~eLlvGs~D~--------~IRvf~~~e--~~~Ei~e~--~~v~~L~~~~~~~F~Y~l~NGTVGvY 68 (111)
T PF14783_consen 1 NVTALCLFDFDGDGENELLVGSDDF--------EIRVFKGDE--IVAEITET--DKVTSLCSLGGGRFAYALANGTVGVY 68 (111)
T ss_pred CeeEEEEEecCCCCcceEEEecCCc--------EEEEEeCCc--EEEEEecc--cceEEEEEcCCCEEEEEecCCEEEEE
Confidence 3677777752 223 66666664 899987543 44443322 578888777665 556688999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCC----EEEEEeCCCeEEE
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESG----MMFIANENKKILT 139 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsg----ll~sa~ed~~I~~ 139 (248)
|.. .-+-.+.. ...+++++++.-.+ .|++|-.+|+|-+
T Consensus 69 ~~~--~RlWRiKS--K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 69 DRS--QRLWRIKS--KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eCc--ceeeeecc--CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 874 44455555 56688888876443 6888888888753
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.025 Score=55.23 Aligned_cols=89 Identities=15% Similarity=0.201 Sum_probs=67.2
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
.-++.++++. +.-..+..-. .+||.++.|++++ |+-+ .-..+-|+|.+ |+++..+- +.+=|.+-|+|.|
T Consensus 250 Eq~Lyll~t~-g~s~~V~L~k-~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~---egpRN~~~fnp~g 323 (566)
T KOG2315|consen 250 EQTLYLLATQ-GESVSVPLLK-EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP---EGPRNTAFFNPHG 323 (566)
T ss_pred cceEEEEEec-CceEEEecCC-CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC---CCCccceEECCCC
Confidence 3578888888 3333332222 2799999999997 3333 67789999998 88887764 4788999999999
Q ss_pred CEEEEEeC---CCeEEEEEcCCC
Q psy2083 126 GMMFIANE---NKKILTYYIPSL 145 (248)
Q Consensus 126 gll~sa~e---d~~I~~w~Ip~l 145 (248)
++|+.|+= .|.|.+||++..
T Consensus 324 ~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 324 NIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CEEEEeecCCCCCceEEEeccch
Confidence 99999874 489999999874
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.041 Score=56.61 Aligned_cols=126 Identities=8% Similarity=0.152 Sum_probs=80.4
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCc-e-eEEecCCCC--CCeeEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADK-P-LRVKDHMYG--LPIRDI 79 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~-p-l~~~~h~~~--~pI~sI 79 (248)
.+|..+|+++....-++...|++++ |++.. -++ ...-++|.++-.+..||.|-.. . +....|+|. ....++
T Consensus 508 ~mDLe~GKVV~eW~~~~~~~v~~~~--p~~K~aqlt--~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~ 583 (794)
T PF08553_consen 508 KMDLERGKVVEEWKVHDDIPVVDIA--PDSKFAQLT--NEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCF 583 (794)
T ss_pred EEecCCCcEEEEeecCCCcceeEec--ccccccccC--CCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEE
Confidence 4788899999998876433455443 32110 001 1112234444479999999753 3 332344443 346677
Q ss_pred EEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 80 KFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 80 ~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
+=+.+| ++++.+|-||++|.- |+.-.|.-|+-..||.+|+++.||..|++.|..-
T Consensus 584 aTt~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty 640 (794)
T PF08553_consen 584 ATTEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCKTY 640 (794)
T ss_pred EecCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeecce
Confidence 777777 778899999999964 5443333332357999999999999999888554
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0054 Score=61.85 Aligned_cols=133 Identities=20% Similarity=0.275 Sum_probs=82.3
Q ss_pred eeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC
Q psy2083 53 AFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 53 ~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd 124 (248)
.|.+||+|.+ .|+.. |.| -..|+++.|+.-. +.++.|++||.||.++.. ...++.. ..+|.--++.|=
T Consensus 181 ~i~vwd~r~gs~pl~s~K~~--vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt--~~piw~~r~~Pf 256 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKGH--VSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTT--NFPIWRGRYLPF 256 (1081)
T ss_pred ceEEEeccCCCcceEEeccc--ceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccc--cCcceecccccc
Confidence 6999999987 67765 454 4889999998653 445689999999987543 2333443 567777788773
Q ss_pred C-CEEEEEeCCC-eEEEEEcCCC----------CCCCCccccccchhhhhhccccc--cccC--CceeecHhHHhhcCCc
Q psy2083 125 S-GMMFIANENK-KILTYYIPSL----------GPAPKWCGFLDNLTEELEENIIE--NVYD--DYKFVTRQELEDLGLG 188 (248)
Q Consensus 125 s-gll~sa~ed~-~I~~w~Ip~l----------G~aP~wcs~ld~~tee~e~~~~~--~~yd--~y~fvt~~~l~~l~~~ 188 (248)
| |+++.....+ .+..+....+ -|.-+...+-|.+.|=|=-...+ .-|| ||..||=+....|.||
T Consensus 257 g~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlW 336 (1081)
T KOG0309|consen 257 GEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLW 336 (1081)
T ss_pred CceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEee
Confidence 3 5555554443 4444442211 22223333344444433222222 3355 8999998888888886
Q ss_pred c
Q psy2083 189 H 189 (248)
Q Consensus 189 ~ 189 (248)
-
T Consensus 337 p 337 (1081)
T KOG0309|consen 337 P 337 (1081)
T ss_pred e
Confidence 4
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.08 Score=48.93 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=71.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE-EEEcC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD-IKFHD 83 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s-I~F~~ 83 (248)
.+|+.+|+.+=.+.-+ +.+...... +++.++.++.+ |.+..+|..+++.++..... .++.+ .....
T Consensus 79 a~d~~tG~~~W~~~~~--~~~~~~p~v-~~~~v~v~~~~--------g~l~ald~~tG~~~W~~~~~--~~~~~~p~v~~ 145 (377)
T TIGR03300 79 ALDAETGKRLWRVDLD--ERLSGGVGA-DGGLVFVGTEK--------GEVIALDAEDGKELWRAKLS--SEVLSPPLVAN 145 (377)
T ss_pred EEEccCCcEeeeecCC--CCcccceEE-cCCEEEEEcCC--------CEEEEEECCCCcEeeeeccC--ceeecCCEEEC
Confidence 3566677766554433 112111111 24445554444 58999999999988876433 23322 12223
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------eEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------NNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------n~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. ++.+.++.|..||.++|+.+-.++. ..+. .+..+ .++.++++..++++..++..
T Consensus 146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~--~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~ 208 (377)
T TIGR03300 146 GLVVVRTNDGRLTALDAATGERLWTYSR--VTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQ 208 (377)
T ss_pred CEEEEECCCCeEEEEEcCCCceeeEEcc--CCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEcc
Confidence 33 5556788999999999998777654 2221 11122 23567778888888877754
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.048 Score=46.40 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=66.7
Q ss_pred CCeeEEEEcCCCceeEEecCCC--CCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMY--GLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~--~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
+|+|..||.++++.++...... +.++.. ....++ ++++.++.|..||..+|+.+-+++. +.++...- ..+++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~--~~~~~~~~-~~~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL--PGPISGAP-VVDGG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC--SSCGGSGE-EEETT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec--ccccccee-eeccc
Confidence 4799999999999999875431 122211 222333 4455899999999999999988886 34433222 34566
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCcccccc
Q psy2083 127 MMFIANENKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
.+++++.++.+..++... -.+.|...+.
T Consensus 78 ~v~v~~~~~~l~~~d~~t--G~~~W~~~~~ 105 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKT--GKVLWSIYLT 105 (238)
T ss_dssp EEEEEETTSEEEEEETTT--SCEEEEEEE-
T ss_pred ccccccceeeeEecccCC--cceeeeeccc
Confidence 777888888888888554 3457875443
|
... |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0081 Score=56.81 Aligned_cols=102 Identities=9% Similarity=0.077 Sum_probs=70.6
Q ss_pred CCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CCeEEE
Q psy2083 22 QTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~~IKI 96 (248)
...|.++.|+|... ++..++-+. +|+|.|+++...+..+.-. .++.+++|.-|. |.+++ .|.|-|
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~n--------kiki~dlet~~~vssy~a~--~~~wSC~wDlde~h~IYaGl~nG~Vlv 262 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGN--------KIKIMDLETSCVVSSYIAY--NQIWSCCWDLDERHVIYAGLQNGMVLV 262 (463)
T ss_pred chhhhhhccCccccceeeeeccCc--------eEEEEecccceeeeheecc--CCceeeeeccCCcceeEEeccCceEEE
Confidence 46889999998654 555666665 8999999998776666543 789999999876 77775 789999
Q ss_pred EECCCCC-EEEEeecCCCCCeeEE---------EEeCCCCEEEEEeCCC
Q psy2083 97 WSKDNGS-LFTCIESGDQTQFNNL---------CHIPESGMMFIANENK 135 (248)
Q Consensus 97 WD~~tGk-~~~tie~~h~~~In~l---------~~~pdsgll~sa~ed~ 135 (248)
+|.+.-+ ++..+.+ ...++.+ ..++-||+++.++.+-
T Consensus 263 yD~R~~~~~~~e~~a--~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l 309 (463)
T KOG1645|consen 263 YDMRQPEGPLMELVA--NVTINPVHKIAPVQPNKIFTSGGLLVFALTVL 309 (463)
T ss_pred EEccCCCchHhhhhh--hhccCcceeecccCccccccccceEEeeehhh
Confidence 9998532 3333332 1222222 3456788888777664
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.15 Score=47.64 Aligned_cols=94 Identities=11% Similarity=0.163 Sum_probs=60.8
Q ss_pred eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 48 TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
++.+|.+...|..+++.++......+....+.....+. ++.+.++.|...|..+|+.+...+.+ ...+.+--+. .++
T Consensus 300 ~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~-~~~~~s~P~~-~~~ 377 (394)
T PRK11138 300 VDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFVAQQKVD-SSGFLSEPVV-ADD 377 (394)
T ss_pred EcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcC-CCcceeCCEE-ECC
Confidence 33446899999999988775432111122222333333 55667899999999999998887641 2334321111 356
Q ss_pred EEEEEeCCCeEEEEEcC
Q psy2083 127 MMFIANENKKILTYYIP 143 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip 143 (248)
.|+++++|+++..+..|
T Consensus 378 ~l~v~t~~G~l~~~~~~ 394 (394)
T PRK11138 378 KLLIQARDGTVYAITRP 394 (394)
T ss_pred EEEEEeCCceEEEEeCC
Confidence 78999999999988755
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.059 Score=42.55 Aligned_cols=61 Identities=16% Similarity=0.327 Sum_probs=49.5
Q ss_pred eeEEEEcC---Cc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 76 IRDIKFHD---NY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 76 I~sI~F~~---d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++++.+ ++ |++|+|..||||+-+ +.+..+.- ...|.+++-.+. +.++-|.++|+|.+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e--~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE--TDKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec--ccceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 56666543 32 788999999999876 88888876 788999998877 6689999999999886
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.2 Score=46.67 Aligned_cols=114 Identities=16% Similarity=0.284 Sum_probs=77.4
Q ss_pred CeeEEEEeCCCCcEEEe--ecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc----eeeeCCCeEE
Q psy2083 24 QFNNLCHIPESGMMFIA--NENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~a--g~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IK 95 (248)
.+..+.+.|++..++++ |.| .|.+||+..++. .....-..|..=+-|.|||++ +++=-+++|-
T Consensus 146 h~H~a~~tP~~~~l~v~DLG~D---------ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~ 216 (346)
T COG2706 146 HVHSANFTPDGRYLVVPDLGTD---------RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVD 216 (346)
T ss_pred ccceeeeCCCCCEEEEeecCCc---------eEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEE
Confidence 37778888988777765 444 699999997742 221111223445889999998 4444588999
Q ss_pred EEECCCC-CEEEEeecC--------CCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCCCC
Q psy2083 96 IWSKDNG-SLFTCIESG--------DQTQFNNLCHIPESGMMFIANEN-KKILTYYIPSLG 146 (248)
Q Consensus 96 IWD~~tG-k~~~tie~~--------h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~lG 146 (248)
+|..+.. ..+..++.. .....-.+.++|||..|.+.+.. ..|.+|-|-..|
T Consensus 217 v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~ 277 (346)
T COG2706 217 VLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDG 277 (346)
T ss_pred EEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 9998872 333443320 13456678899999999988865 578888876643
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.065 Score=54.52 Aligned_cols=86 Identities=13% Similarity=0.241 Sum_probs=59.6
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-------ee-eeCCCeEEEEECCCCCEEEE--eecCCCCCeeEEEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-------VL-SMDSSVVKIWSKDNGSLFTC--IESGDQTQFNNLCH 121 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-------l~-Ssdd~~IKIWD~~tGk~~~t--ie~~h~~~In~l~~ 121 (248)
|+|-+--+-+++...+.+.+ .||++|+++|+. .+ ++..| +-+...+=-+...+ +..+ ..+|.+++|
T Consensus 93 Gkv~I~sl~~~~~~~~~df~--rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~-eG~I~~i~W 168 (846)
T KOG2066|consen 93 GKVVIGSLFTDDEITQYDFK--RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG-EGPIHSIKW 168 (846)
T ss_pred CcEEEeeccCCccceeEecC--CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC-ccceEEEEe
Confidence 58999888888877766544 899999999992 44 44555 55655442122222 2332 679999998
Q ss_pred eCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 122 IPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|.+|+=|+++| |++|++|.
T Consensus 169 --~g~lIAWand~G-v~vyd~~~ 188 (846)
T KOG2066|consen 169 --RGNLIAWANDDG-VKVYDTPT 188 (846)
T ss_pred --cCcEEEEecCCC-cEEEeccc
Confidence 588999999777 78888653
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.089 Score=51.08 Aligned_cols=103 Identities=16% Similarity=0.284 Sum_probs=70.6
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-----
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM----- 89 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss----- 89 (248)
++.. -+.|-.+..++++..+++++.. +.+.++|+.++++..+--..+ .-|+...|||++ ++=+
T Consensus 397 ~e~~-lg~I~av~vs~dGK~~vvaNdr--------~el~vididngnv~~idkS~~-~lItdf~~~~nsr~iAYafP~gy 466 (668)
T COG4946 397 IEKD-LGNIEAVKVSPDGKKVVVANDR--------FELWVIDIDNGNVRLIDKSEY-GLITDFDWHPNSRWIAYAFPEGY 466 (668)
T ss_pred eeCC-ccceEEEEEcCCCcEEEEEcCc--------eEEEEEEecCCCeeEeccccc-ceeEEEEEcCCceeEEEecCcce
Confidence 3443 4789999999866555555443 389999999998865532233 469999999997 4322
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
--+.||++|..+||.+..-.+ .+-=-+=+|.|||..|.--
T Consensus 467 ~tq~Iklydm~~~Kiy~vTT~--ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 467 YTQSIKLYDMDGGKIYDVTTP--TAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred eeeeEEEEecCCCeEEEecCC--cccccCcccCCCCcEEEEE
Confidence 256899999999998765544 2222234788999876543
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.49 Score=42.97 Aligned_cols=111 Identities=14% Similarity=0.278 Sum_probs=72.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCCceeeeC-CCeEEEE--
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDNYVLSMD-SSVVKIW-- 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d~l~Ssd-d~~IKIW-- 97 (248)
.+.|.+++.+ +|.++++.+. .|.+|++...+ -+..-.+.....|.++.-..+.++.+| .+.|-++
T Consensus 88 ~g~V~ai~~~--~~~lv~~~g~---------~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 88 KGPVTAICSF--NGRLVVAVGN---------KLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp SS-EEEEEEE--TTEEEEEETT---------EEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cCcceEhhhh--CCEEEEeecC---------EEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEE
Confidence 4689999999 4456665555 79999999887 333323333357888888877755554 5566664
Q ss_pred ECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.+ ++.+.-+.. ..+..+.+++|-+|+..++++..++.+.++..+.
T Consensus 157 ~~~-~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 157 DEE-NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp ETT-TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred Ecc-CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence 664 332333321 0145788899987777889999999999998764
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.26 Score=47.11 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKI 96 (248)
+.+....|+||+..++.+.+.+ .++.|.++|+.++.+.....+. .....-.|+||+ +.+++ . ..|-+
T Consensus 233 g~~~~~~~SPDG~~la~~~~~~-----g~~~Iy~~dl~~g~~~~LT~~~--~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~ 305 (419)
T PRK04043 233 GMLVVSDVSKDGSKLLLTMAPK-----GQPDIYLYDTNTKTLTQITNYP--GIDVNGNFVEDDKRIVFVSDRLGYPNIFM 305 (419)
T ss_pred CcEEeeEECCCCCEEEEEEccC-----CCcEEEEEECCCCcEEEcccCC--CccCccEECCCCCEEEEEECCCCCceEEE
Confidence 3445577888877655433322 1358999999888644332222 112345799998 44443 2 26778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
.|..+|+...-...+ .. + ..|+|||+.|+..+..
T Consensus 306 ~dl~~g~~~rlt~~g-~~--~-~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 306 KKLNSGSVEQVVFHG-KN--N-SSVSTYKNYIVYSSRE 339 (419)
T ss_pred EECCCCCeEeCccCC-Cc--C-ceECCCCCEEEEEEcC
Confidence 899887763322211 22 2 4899999877666543
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.029 Score=57.83 Aligned_cols=129 Identities=8% Similarity=0.138 Sum_probs=84.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|.++-+-+.++..| ++.|.+ |.=.|..|+++|-+.+- .=..|.=|++||||.=+.+.-....+ .| .=+.|+|..
T Consensus 203 D~~s~~~iht~~aH-s~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~-~P-~flrf~Psl 277 (1118)
T KOG1275|consen 203 DPNSFETIHTFDAH-SGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY-GP-QFLRFHPSL 277 (1118)
T ss_pred cCCcCceeeeeecc-ccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc-Cc-hhhhhcccc
Confidence 55666677777776 554432 22334557777766543 22345679999999864332111111 22 447788875
Q ss_pred ----eeeeCCCeEEEEECCC-CCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ----VLSMDSSVVKIWSKDN-GSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ----l~Ssdd~~IKIWD~~t-Gk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++++..+...+-|..+ +.+ +.-+.++ .+-|..++++++|..|+.+..++.|.+|-
T Consensus 278 ~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~-~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 278 TTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPN-GSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceEEEEecccceeeccccccCCCccceeEEccC-CCcceeEEecCCCceEEEecccCcEeeec
Confidence 6667888888888433 333 2233442 45599999999999999999999999995
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.034 Score=56.51 Aligned_cols=106 Identities=12% Similarity=0.232 Sum_probs=78.2
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-----------c---eeee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-----------Y---VLSM 89 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-----------~---l~Ss 89 (248)
+-+.+.+ .++|+++-|+.+ .|-+-|.|+-+-+....| |...|++|.|.|. . |+++
T Consensus 17 N~~A~Dw-~~~GLiAygshs---------lV~VVDs~s~q~iqsie~-h~s~V~~VrWap~~~p~~llS~~~~~lliAsa 85 (1062)
T KOG1912|consen 17 NRNAADW-SPSGLIAYGSHS---------LVSVVDSRSLQLIQSIEL-HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASA 85 (1062)
T ss_pred ccccccc-CccceEEEecCc---------eEEEEehhhhhhhhcccc-CccceeEEEeccCCCchhccCccccceeEEec
Confidence 3334444 458877766666 689999999877776654 2478999999763 1 5556
Q ss_pred C-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC---CC-CEEEEEeCCCeEEEEE
Q psy2083 90 D-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP---ES-GMMFIANENKKILTYY 141 (248)
Q Consensus 90 d-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p---ds-gll~sa~ed~~I~~w~ 141 (248)
| .|.|-|||...+.....++. |..++.++||.| ++ .+|++-.-...+.+|.
T Consensus 86 D~~GrIil~d~~~~s~~~~l~~-~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwn 141 (1062)
T KOG1912|consen 86 DISGRIILVDFVLASVINWLSH-SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWN 141 (1062)
T ss_pred cccCcEEEEEehhhhhhhhhcC-CCcchhheeeeeccCcchheeEEecCCcEEEEEE
Confidence 6 67788999999988888887 588999999976 66 4555556677888883
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.004 Score=61.82 Aligned_cols=145 Identities=11% Similarity=0.186 Sum_probs=93.9
Q ss_pred CeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCCc---eeee-----CCCeEEEEECCCC--CEEEEee--cCCCCCeeE
Q psy2083 52 PAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDNY---VLSM-----DSSVVKIWSKDNG--SLFTCIE--SGDQTQFNN 118 (248)
Q Consensus 52 G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d~---l~Ss-----dd~~IKIWD~~tG--k~~~tie--~~h~~~In~ 118 (248)
|.|.|--+|...-- +...-+|..+.++++|++-. ++.+ .|..++|||..++ .+..+.. ++.....|+
T Consensus 80 G~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns 159 (783)
T KOG1008|consen 80 GNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNS 159 (783)
T ss_pred CceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccc
Confidence 58888888875321 33333445899999999752 4444 2668999999987 3333322 111346779
Q ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeecHhHHhhcCCccccCCCcccc
Q psy2083 119 LCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRA 198 (248)
Q Consensus 119 l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~ 198 (248)
+|+-.|..++++|...+.+++++..+ - ++..- ++. ++++-.-.+.|
T Consensus 160 ~cwlrd~klvlaGm~sr~~~ifdlRq-------s--~~~~~---------------------svn----Tk~vqG~tVdp 205 (783)
T KOG1008|consen 160 VCWLRDTKLVLAGMTSRSVHIFDLRQ-------S--LDSVS---------------------SVN----TKYVQGITVDP 205 (783)
T ss_pred cccccCcchhhcccccchhhhhhhhh-------h--hhhhh---------------------hhh----hhhcccceecC
Confidence 99999999999999999999997653 1 11110 000 11222235889
Q ss_pred cceeeeechhhHHHHhhhcC-ChhhHHHHHHHHHH
Q psy2083 199 YMHGFFMDIRLYRKAKSVSA-PFEFEEFKKKKIRE 232 (248)
Q Consensus 199 ymhgyf~~~~ly~~~~~~~~-~~~~~~~~~~~~~~ 232 (248)
|-|+||++.. +-..++-+ |+..|.+-+..++.
T Consensus 206 ~~~nY~cs~~--dg~iAiwD~~rnienpl~~i~~~ 238 (783)
T KOG1008|consen 206 FSPNYFCSNS--DGDIAIWDTYRNIENPLQIILRN 238 (783)
T ss_pred CCCCceeccc--cCceeeccchhhhccHHHHHhhC
Confidence 9999999987 44555555 77777776665543
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.12 Score=48.30 Aligned_cols=89 Identities=15% Similarity=0.244 Sum_probs=65.6
Q ss_pred CCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC-C
Q psy2083 72 YGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL-G 146 (248)
Q Consensus 72 ~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l-G 146 (248)
|..+|.+++|.+.. +.| +.|..|-+||+- |.....++. +|...|..++..+--..++++++|+.|.+|+...- -
T Consensus 196 h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig-g~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 196 HTGEVTCLKWDPGQRLLFSGASDHSVIMWDIG-GRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred cccceEEEEEcCCCcEEEeccccCceEEEecc-CCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 34889999998876 555 468888899987 444444442 26788998999888999999999999999986544 5
Q ss_pred CCCCccccccchhhhhh
Q psy2083 147 PAPKWCGFLDNLTEELE 163 (248)
Q Consensus 147 ~aP~wcs~ld~~tee~e 163 (248)
..|.|= +++=-|+.+
T Consensus 275 etpewl--~s~~cQ~c~ 289 (404)
T KOG1409|consen 275 ETPEWL--DSDSCQKCN 289 (404)
T ss_pred cCcccc--ccchhhhhC
Confidence 678775 444444444
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.14 Score=46.90 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=55.8
Q ss_pred ecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEEECC-CCCEE-EEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEE
Q psy2083 68 KDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIWSKD-NGSLF-TCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTY 140 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIWD~~-tGk~~-~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w 140 (248)
+.|. .++...+|+... |. ++||+.+..||.+ .++.+ +...- |.+.|.|+.-+| ....|++|+-|..|++|
T Consensus 162 k~He--~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kv-H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~ 238 (339)
T KOG0280|consen 162 KVHE--FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKV-HTSGVVSIYSSPPKPTYIATGSYDECIRVL 238 (339)
T ss_pred cccc--eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeeccee-eecceEEEecCCCCCceEEEeccccceeee
Confidence 4555 788888887543 44 4699999999999 33332 22344 567777766665 67899999999999999
Q ss_pred EcCCCC
Q psy2083 141 YIPSLG 146 (248)
Q Consensus 141 ~Ip~lG 146 (248)
|...+|
T Consensus 239 DtRnm~ 244 (339)
T KOG0280|consen 239 DTRNMG 244 (339)
T ss_pred ehhccc
Confidence 987654
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.0044 Score=63.62 Aligned_cols=136 Identities=12% Similarity=0.153 Sum_probs=93.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|....+...| ++.|+.+.=+-++.+++++++.. ..-..|||+.+ +.|.+.++. -++|.|+..
T Consensus 1128 ~nv~sG~~e~s~ncH-~SavT~vePs~dgs~~Ltsss~S------~PlsaLW~~~s~~~~~Hsf~e-----d~~vkFsn~ 1195 (1516)
T KOG1832|consen 1128 FNVSSGSMEESVNCH-QSAVTLVEPSVDGSTQLTSSSSS------SPLSALWDASSTGGPRHSFDE-----DKAVKFSNS 1195 (1516)
T ss_pred EEccCcccccccccc-ccccccccccCCcceeeeecccc------CchHHHhccccccCccccccc-----cceeehhhh
Confidence 566777777776665 78888888888888876655543 24689999987 356555543 378999887
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEe-ec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCI-ES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~ti-e~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
. ++++......|||++|+.++.++ .+ ..+..=|.+.|+|+..+|+= || .+|++..-...-++=.|-+++
T Consensus 1196 ~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~FD~ft~~~ 1270 (1516)
T KOG1832|consen 1196 LQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPEAIHRFDQFTDYG 1270 (1516)
T ss_pred HHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---Cc--eeeeeccHHHHhhhhhheecc
Confidence 5 77766567789999999888773 32 01234578999999998873 33 478876655554444444433
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.14 Score=50.28 Aligned_cols=126 Identities=10% Similarity=0.126 Sum_probs=85.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-cee--EEecCCCCC--CeeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPL--RVKDHMYGL--PIRD 78 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl--~~~~h~~~~--pI~s 78 (248)
.+|..+|+++..-.-+ ..|+-+.+-|+... .++ +..-++|-++..|.-||.|-. +.. +...|+|.. ...|
T Consensus 360 klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~--~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc 435 (644)
T KOG2395|consen 360 KLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLT--SEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSC 435 (644)
T ss_pred eeecccceeeeEeecc--CCcceeeccCCcchhccc--ccccEEeecCCceEEecccccCcceeeeeeccccccccccce
Confidence 4889999999997665 34777777776433 222 222346666778999999965 322 334555432 3445
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
.+=..++ +++|.+|-||++|. .|..-.+.-|+-..+|..+..+.||..|+..|+.-
T Consensus 436 ~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~ty 493 (644)
T KOG2395|consen 436 FATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTY 493 (644)
T ss_pred eeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccE
Confidence 5555666 77789999999998 56544444442357999999999999998887553
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.69 Score=45.12 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=69.1
Q ss_pred eeeecCC-eeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEE
Q psy2083 46 ILTYYIP-AFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLC 120 (248)
Q Consensus 46 ~~~~~~G-~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~ 120 (248)
++|+.|| .+-+||.++++.-.. .+- ..|-++..++++ ++.+ +...|-+.|+++|+.. .++.....-|.++.
T Consensus 375 vigt~dgD~l~iyd~~~~e~kr~e~~l---g~I~av~vs~dGK~~vvaNdr~el~vididngnv~-~idkS~~~lItdf~ 450 (668)
T COG4946 375 VIGTNDGDKLGIYDKDGGEVKRIEKDL---GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-LIDKSEYGLITDFD 450 (668)
T ss_pred EEeccCCceEEEEecCCceEEEeeCCc---cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-EecccccceeEEEE
Confidence 3566666 899999999864332 332 479999999997 4444 5567888899999753 44432356899999
Q ss_pred EeCCCCEEEEEeCC----CeEEEEEcC
Q psy2083 121 HIPESGMMFIANEN----KKILTYYIP 143 (248)
Q Consensus 121 ~~pdsgll~sa~ed----~~I~~w~Ip 143 (248)
++||+..|+-|--+ ..|++|++-
T Consensus 451 ~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 451 WHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred EcCCceeEEEecCcceeeeeEEEEecC
Confidence 99999999887654 467888864
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.26 Score=44.81 Aligned_cols=102 Identities=10% Similarity=0.131 Sum_probs=64.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-----cCCCCCCeeEEEEcCCc---------eeee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-----DHMYGLPIRDIKFHDNY---------VLSM 89 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-----~h~~~~pI~sI~F~~d~---------l~Ss 89 (248)
.=..++|+||+.+|+.+.+. |+|++||+-......+. .-....+|-.+.|.+.. ++-.
T Consensus 45 QWRkl~WSpD~tlLa~a~S~--------G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~ 116 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAEST--------GTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN 116 (282)
T ss_pred hheEEEECCCCcEEEEEcCC--------CeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEe
Confidence 34678899987766666555 49999999865333221 12233567778886531 3334
Q ss_pred CCCeEEEEECCC-----CCEEEEee--cCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 90 DSSVVKIWSKDN-----GSLFTCIE--SGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 90 dd~~IKIWD~~t-----Gk~~~tie--~~h~~~In~l~~~pdsgll~sa~e 133 (248)
-++.++=+=+.. .+...++. .+++..|+++++.|..++|++|+.
T Consensus 117 Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~ 167 (282)
T PF15492_consen 117 YRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGC 167 (282)
T ss_pred ccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEecc
Confidence 565555554322 23344444 334679999999999999888864
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.019 Score=62.81 Aligned_cols=117 Identities=10% Similarity=0.100 Sum_probs=81.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
+-+++.+-.-| .....+.+|.. ..++++|.+. .++.|.+||.--+ +.+.-+-|. ..+++++|-|..
T Consensus 2281 ~pk~~~s~qch-nk~~~Df~Fi~--s~~~tag~s~-----d~~n~~lwDtl~~~~~s~v~~~H~--~gaT~l~~~P~~ql 2350 (2439)
T KOG1064|consen 2281 SPKPYTSWQCH-NKALSDFRFIG--SLLATAGRSS-----DNRNVCLWDTLLPPMNSLVHTCHD--GGATVLAYAPKHQL 2350 (2439)
T ss_pred CCcceeccccC-Cccccceeeee--hhhhccccCC-----CCCcccchhcccCcccceeeeecC--CCceEEEEcCcceE
Confidence 34445553333 56677888876 4466655432 3479999996543 334445555 678999999987
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++| +-+|-|++||++..+..++++. +. .-.++++|+..+.|++|.+...|-
T Consensus 2351 lisggr~G~v~l~D~rqrql~h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2351 LISGGRKGEVCLFDIRQRQLRHTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred EEecCCcCcEEEeehHHHHHHHHhhh----------hh-hhheeeccCcccceEEEEccccch
Confidence 444 5789999999998887777664 22 456889999999999999876543
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.32 Score=47.42 Aligned_cols=109 Identities=11% Similarity=0.134 Sum_probs=75.1
Q ss_pred CCCeeEEEEeCCCCcEEEee-cCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-C--CCeE
Q psy2083 22 QTQFNNLCHIPESGMMFIAN-ENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D--SSVV 94 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag-~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d--d~~I 94 (248)
.+.|.+.+|.|.+.-.++.+ -.. .++.++|+|.. +....- ..+=|.+.|+|.. |+.+ + .+.|
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~p-------a~~s~~~lr~N--l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni 342 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYMP-------ASVSVFDLRGN--LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNI 342 (561)
T ss_pred cccceeeeecccCCceeEEecccc-------cceeecccccc--eEEecC--CcccccccccCcccEEEEecCCccccce
Confidence 47899999999876654443 332 38999999986 333221 2456889999997 4444 2 5679
Q ss_pred EEEECCCCCEEE-EeecCCCCCeeEEEEeCCCCEEEEEeC------CCeEEEEEcCC
Q psy2083 95 KIWSKDNGSLFT-CIESGDQTQFNNLCHIPESGMMFIANE------NKKILTYYIPS 144 (248)
Q Consensus 95 KIWD~~tGk~~~-tie~~h~~~In~l~~~pdsgll~sa~e------d~~I~~w~Ip~ 144 (248)
-|||+.....+. .+.+ ..-.-+.|+|||.++.++.. |..|.+|+|..
T Consensus 343 ~i~~~~~rf~~~~~~~~---~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 343 EIFDPAGRFKVAGAFNG---LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred EEeccCCceEEEEEeec---CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 999998544333 6665 23334569999999999864 55689999854
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.15 Score=50.31 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=74.5
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-e-----------CC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-M-----------DS 91 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-s-----------dd 91 (248)
+=+.++|-|.+|++---.+ |.||-=.+-.-++.+.|. .|.-|.|||.. +++ | +.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G---------I~lWGG~~f~r~~RF~Hp---~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~ 281 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG---------IALWGGESFDRIQRFYHP---GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEG 281 (698)
T ss_pred eeEEecCCceEEEEEeccc---------eeeecCccHHHHHhccCC---CceeeecCCccceEEEecCCccccCcccCCC
Confidence 4567778777676655443 788865554555666774 58999999985 333 1 23
Q ss_pred CeEEEEECCCCCEEEEeec-CCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIES-GDQTQFN-NLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~-~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
..+.|||+.||....++.. ..+..+. =+.||.|+.+++--.. ..|.+|.-|.+++-
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~ll 339 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLL 339 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeee
Confidence 6899999999998887753 0033333 2678889988765443 67889988877543
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.075 Score=35.46 Aligned_cols=30 Identities=13% Similarity=0.421 Sum_probs=28.1
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
..+|+.++|+|...+|+.|++++.|.+|.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 468999999999999999999999999986
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.23 Score=50.55 Aligned_cols=148 Identities=14% Similarity=0.200 Sum_probs=94.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------eE--------EecCCCCCCeeEEEEcCCc--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------LR--------VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l~--------~~~h~~~~pI~sI~F~~d~--l 86 (248)
.....+.+..++|+++.+|.|+ .+++--+.+..+ +. ..-.+|...|.-+.|+.+. +
T Consensus 15 vkL~c~~WNke~gyIAcgG~dG--------lLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKL 86 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADG--------LLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKL 86 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccc--------eeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccc
Confidence 5667888888899898888885 778777665422 11 1113556889999999876 8
Q ss_pred eeeC-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCCCEEEEEeCCCeEE--------EEE--cC-CCCCCCCccc
Q psy2083 87 LSMD-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKIL--------TYY--IP-SLGPAPKWCG 153 (248)
Q Consensus 87 ~Ssd-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pdsgll~sa~ed~~I~--------~w~--Ip-~lG~aP~wcs 153 (248)
.+|| ++.|-+|=..+|.=... +.....+.|.+++|..||.-|..+-+||.|- +|- +. .+-.---|..
T Consensus 87 TtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~ 166 (1189)
T KOG2041|consen 87 TTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSE 166 (1189)
T ss_pred cccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecc
Confidence 8886 88999999887752111 1111257788999999999998888888774 332 00 0111223555
Q ss_pred cccchhhhhhccccccccCC-ceeecH
Q psy2083 154 FLDNLTEELEENIIENVYDD-YKFVTR 179 (248)
Q Consensus 154 ~ld~~tee~e~~~~~~~yd~-y~fvt~ 179 (248)
-++-+.--++. ..+-+||+ -.|--+
T Consensus 167 D~~~~Lf~~an-ge~hlydnqgnF~~K 192 (1189)
T KOG2041|consen 167 DLEQALFKKAN-GETHLYDNQGNFERK 192 (1189)
T ss_pred cHHHHHhhhcC-CcEEEecccccHHHh
Confidence 55555555543 34556763 344433
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.43 Score=43.33 Aligned_cols=154 Identities=11% Similarity=0.164 Sum_probs=86.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEe--CCC----CcEEEeecCcee---eeecCCeeEEEEcCCC-----ceeEEecCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHI--PES----GMMFIANENKKI---LTYYIPAFYLYDIRAD-----KPLRVKDHM 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~--~~~----g~l~~ag~d~~~---~~~~~G~V~LwDlRs~-----~pl~~~~h~ 71 (248)
+|+.+...+.+++=.....+++++.. +.+ ..++++|..-.. ..+..|.|.+|++... +......+.
T Consensus 7 ~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~ 86 (321)
T PF03178_consen 7 VDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTE 86 (321)
T ss_dssp EETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEE
T ss_pred EeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEe
Confidence 56667777776541112355555554 332 223333322100 0012289999999994 332233334
Q ss_pred CCCCeeEEEEcCCceeeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC----C-
Q psy2083 72 YGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS----L- 145 (248)
Q Consensus 72 ~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~----l- 145 (248)
...||.+|+--.+.++.+-.+.|.+|+....+ ....-.-+.+..+.++... +++|++|.--.-|.++..-. |
T Consensus 87 ~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~ 164 (321)
T PF03178_consen 87 VKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLI 164 (321)
T ss_dssp ESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EE
T ss_pred ecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEE
Confidence 45899999877655777777889999998877 4332222114566666665 55888888777666553221 1
Q ss_pred ----CCCCCccccccchhhh
Q psy2083 146 ----GPAPKWCGFLDNLTEE 161 (248)
Q Consensus 146 ----G~aP~wcs~ld~~tee 161 (248)
-..|+|+.-.+-|..|
T Consensus 165 ~va~d~~~~~v~~~~~l~d~ 184 (321)
T PF03178_consen 165 LVARDYQPRWVTAAEFLVDE 184 (321)
T ss_dssp EEEEESS-BEEEEEEEE-SS
T ss_pred EEEecCCCccEEEEEEecCC
Confidence 2368998777777443
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.13 Score=47.54 Aligned_cols=116 Identities=14% Similarity=0.294 Sum_probs=70.9
Q ss_pred eCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEE
Q psy2083 31 IPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 31 ~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~t 107 (248)
+||+..++.+....+. -.++.+.+.|||+.+++....... ..++....|+|++ ++-..++-|-+++..+++. ..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~--~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~-~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP--PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQE-TQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E--ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEE-EE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC--ccccccceeecCCCeeEEEecCceEEEECCCCCe-EE
Confidence 3555554443332222 445567899999999854332221 3678999999998 6556677888998877743 33
Q ss_pred eecCCC-----------------CCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCC
Q psy2083 108 IESGDQ-----------------TQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAP 149 (248)
Q Consensus 108 ie~~h~-----------------~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP 149 (248)
+...-. ..-..+-|+|||..|+... +++.|..+.+|..++.+
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~ 137 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPD 137 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSST
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCcc
Confidence 322000 1124578999998777664 66889999888877765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=94.32 E-value=1.2 Score=44.98 Aligned_cols=89 Identities=10% Similarity=-0.028 Sum_probs=64.3
Q ss_pred CeeEEEEcCC----Cce-eEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECCCCC------------EEEEeec
Q psy2083 52 PAFYLYDIRA----DKP-LRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKDNGS------------LFTCIES 110 (248)
Q Consensus 52 G~V~LwDlRs----~~p-l~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk------------~~~tie~ 110 (248)
++|.+.|.++ +.. +....-+ ..-..|.++||+ ++++ -+.+|.|.|..+.+ .+..++.
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVG--KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVP--KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECC--CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 4699999998 333 3322222 445779999998 3333 58899999999855 3566665
Q ss_pred CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ..| ...+|.++|....+-.-|++|--|+|..
T Consensus 374 G-lGP-LHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 374 G-LGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred C-CCc-ceEEECCCCCEEEeEeecceeEEEehHH
Confidence 2 334 4678999999888889999999999765
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.22 E-value=3.6 Score=37.29 Aligned_cols=120 Identities=6% Similarity=-0.001 Sum_probs=74.8
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
+++.++.+......-.+.|.+++.++-++|-.++ ..|+.+|+.+++.+....-.....=-.|+...+. .++-
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~------S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTW 107 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQ------SSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTW 107 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTE------EEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEES
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCc------EEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEe
Confidence 3555555543445556666565544446666543 4899999999987765432222333466666776 6677
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
-+++.-+||.++-+.+.++.- +.+=..+| .|+..|....-+.++..++
T Consensus 108 k~~~~f~yd~~tl~~~~~~~y--~~EGWGLt--~dg~~Li~SDGS~~L~~~d 155 (264)
T PF05096_consen 108 KEGTGFVYDPNTLKKIGTFPY--PGEGWGLT--SDGKRLIMSDGSSRLYFLD 155 (264)
T ss_dssp SSSEEEEEETTTTEEEEEEE---SSS--EEE--ECSSCEEEE-SSSEEEEE-
T ss_pred cCCeEEEEccccceEEEEEec--CCcceEEE--cCCCEEEEECCccceEEEC
Confidence 889999999999999999875 55667777 4566666665577777776
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.39 Score=46.47 Aligned_cols=138 Identities=20% Similarity=0.336 Sum_probs=65.3
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe-EEEEEcC------CCCCCCCccccccch
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK-ILTYYIP------SLGPAPKWCGFLDNL 158 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~-I~~w~Ip------~lG~aP~wcs~ld~~ 158 (248)
+....++.|.+||.++++.+..++. .+|..|.|+++|.+++..+++.- |.-|+.. .-|.. .-+ .+
T Consensus 120 L~~~~~~~i~~yDw~~~~~i~~i~v---~~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e----~~f-~~ 191 (443)
T PF04053_consen 120 LGVKSSDFICFYDWETGKLIRRIDV---SAVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVE----DAF-EL 191 (443)
T ss_dssp EEEEETTEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-G----GGE-EE
T ss_pred EEEECCCCEEEEEhhHcceeeEEec---CCCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCch----hce-EE
Confidence 3334555799999999999999986 34999999999999999987742 2333321 10110 011 12
Q ss_pred hhhhhccccccccC--CceeecHhHHhhcCCccccCC------Ccc-cccceeeee-chhhH---H--HHhhhcCChhhH
Q psy2083 159 TEELEENIIENVYD--DYKFVTRQELEDLGLGHLIGT------SLL-RAYMHGFFM-DIRLY---R--KAKSVSAPFEFE 223 (248)
Q Consensus 159 tee~e~~~~~~~yd--~y~fvt~~~l~~l~~~~ligt------~~l-~~ymhgyf~-~~~ly---~--~~~~~~~~~~~~ 223 (248)
..|..+.-.+-+++ -+-|.|.. .|.- |+|. .+- .-|+=||.= ..++| + .+..+.=+...=
T Consensus 192 ~~E~~~~IkSg~W~~d~fiYtT~~---~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~~~ 266 (443)
T PF04053_consen 192 IHEISERIKSGCWVEDCFIYTTSN---HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDLSEL 266 (443)
T ss_dssp EEEE-S--SEEEEETTEEEEE-TT---EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--HHHH
T ss_pred EEEecceeEEEEEEcCEEEEEcCC---eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECHHHH
Confidence 22322333344433 34445555 3333 4432 111 123334432 12332 1 344455566777
Q ss_pred HHHHHHHHHHHHH
Q psy2083 224 EFKKKKIRERIEQ 236 (248)
Q Consensus 224 ~~~~~~~~~~~~~ 236 (248)
+|+...+++.+++
T Consensus 267 ~fk~av~~~d~~~ 279 (443)
T PF04053_consen 267 EFKTAVLRGDFEE 279 (443)
T ss_dssp HHHHHHHTT-HHH
T ss_pred HHHHHHHcCChhh
Confidence 8888888888887
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.52 Score=47.60 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=67.1
Q ss_pred eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE-----EEEeecCCCCCeeE
Q psy2083 47 LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL-----FTCIESGDQTQFNN 118 (248)
Q Consensus 47 ~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~-----~~tie~~h~~~In~ 118 (248)
+|++.|.|.||.=..+.....+.-+-..-+..+..|++. +++++.+.|-++-...+.+ ++.....|+..|++
T Consensus 50 ~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTa 129 (726)
T KOG3621|consen 50 MGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTA 129 (726)
T ss_pred EecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEE
Confidence 333446999998777765555543322345556677765 4456888898888776432 22233235788999
Q ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 119 LCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 119 l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|++|+..+++|...|+|..--+..
T Consensus 130 l~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 130 LEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEecccccEEeecCCCceEEEEEech
Confidence 99999999999999999998765443
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.01 E-value=2.4 Score=39.15 Aligned_cols=127 Identities=10% Similarity=0.120 Sum_probs=79.8
Q ss_pred cccchhcCceeEEEecCCCCCee-EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe-cCCCCCCeeEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~-~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~-~h~~~~pI~sI~ 80 (248)
.-||..+|+..+.+.....-.-+ -.+|++|+.+|+++-.|- .+..|.|-+||.+.+ +-+-.+ .|+ -.=..|.
T Consensus 31 ~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~---~~g~G~IgVyd~~~~~~ri~E~~s~G--IGPHel~ 105 (305)
T PF07433_consen 31 LVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDY---ETGRGVIGVYDAARGYRRIGEFPSHG--IGPHELL 105 (305)
T ss_pred EEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEecccc---CCCcEEEEEEECcCCcEEEeEecCCC--cChhhEE
Confidence 44788899988887643211222 456778887788764442 345689999999944 333333 222 2234566
Q ss_pred EcCCc--eeee-------------------CCCeEEEEECCCCCEEEEeec---CCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 81 FHDNY--VLSM-------------------DSSVVKIWSKDNGSLFTCIES---GDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 81 F~~d~--l~Ss-------------------dd~~IKIWD~~tGk~~~tie~---~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
+.||+ |+-+ .+-.+-.-|..+|+.+...+. .|..+|+.+++.++|..++..-.++
T Consensus 106 l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg 184 (305)
T PF07433_consen 106 LMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQG 184 (305)
T ss_pred EcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCC
Confidence 66664 2111 123444568888998887542 2467899999999987776665444
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.48 Score=46.71 Aligned_cols=93 Identities=19% Similarity=0.323 Sum_probs=64.0
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----------eeeeCCCeEEEEECCC-CC-EEEEeecC---CCCCee
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----------VLSMDSSVVKIWSKDN-GS-LFTCIESG---DQTQFN 117 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----------l~Ssdd~~IKIWD~~t-Gk-~~~tie~~---h~~~In 117 (248)
.+.=-||..|+-+-..... ..|+-+.+.|+. +++-+++.|-=||++- |+ .+...+++ .....+
T Consensus 357 ~l~klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFs 434 (644)
T KOG2395|consen 357 KLYKLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFS 434 (644)
T ss_pred cceeeecccceeeeEeecc--CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccc
Confidence 5677799999877664333 337778888763 6776788888899883 44 23333331 023455
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEE---------cCCCCCC
Q psy2083 118 NLCHIPESGMMFIANENKKILTYY---------IPSLGPA 148 (248)
Q Consensus 118 ~l~~~pdsgll~sa~ed~~I~~w~---------Ip~lG~a 148 (248)
|++- ..+|.|++|+.+|.|++|+ +|.||.|
T Consensus 435 c~aT-T~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~ 473 (644)
T KOG2395|consen 435 CFAT-TESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDA 473 (644)
T ss_pred eeee-cCCceEEEeecCCcEEeehhhhhhhhhcccccCCc
Confidence 5444 4667899999999999998 7888877
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.26 Score=50.29 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=67.0
Q ss_pred eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC
Q psy2083 48 TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd 124 (248)
||-.|.|.++|..- .|-..++|.. . ..++ ++ +|+||.|-|-...+++..+++.- ..+|++++++||
T Consensus 55 GtH~g~v~~~~~~~-~~~~~~~~s~---~-----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df--~rpiksial~Pd 123 (846)
T KOG2066|consen 55 GTHRGAVYLTTCQG-NPKTNFDHSS---S-----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF--KRPIKSIALHPD 123 (846)
T ss_pred ccccceEEEEecCC-cccccccccc---c-----ccCCceEEEecCCCcEEEeeccCCccceeEec--CCcceeEEeccc
Confidence 33446899998864 3444456641 1 3334 44 56899999999999999999988 789999999998
Q ss_pred -----CCEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 125 -----SGMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 125 -----sgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
++.+++|+..| +.++- -+|=...+.+
T Consensus 124 ~~~~~sk~fv~GG~ag-lvL~e-------r~wlgnk~~v 154 (846)
T KOG2066|consen 124 FSRQQSKQFVSGGMAG-LVLSE-------RNWLGNKDSV 154 (846)
T ss_pred hhhhhhhheeecCcce-EEEeh-------hhhhcCccce
Confidence 79999999988 66663 4455555555
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=93.29 E-value=1 Score=46.57 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=60.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEc-------CCc-eeeeCCCeEEEEECCCC--CEEEEeecC---CCCCeeEE
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFH-------DNY-VLSMDSSVVKIWSKDNG--SLFTCIESG---DQTQFNNL 119 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-------~d~-l~Ssdd~~IKIWD~~tG--k~~~tie~~---h~~~In~l 119 (248)
.|.-.||..|+-+....-....||.+++-. +.. +++-+++.+--||++-. +++.+ +.+ .....+|+
T Consensus 505 ~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k~Y~~~~~Fs~~ 583 (794)
T PF08553_consen 505 KLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSKQYSSKNNFSCF 583 (794)
T ss_pred ceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec-cccccccCCCceEE
Confidence 788899999998877654445667777543 222 77778888889999863 23321 110 13567766
Q ss_pred EEeCCCCEEEEEeCCCeEEEEE
Q psy2083 120 CHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 120 ~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+-. ..|.|++|+.+|.|++|+
T Consensus 584 aTt-~~G~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 584 ATT-EDGYIAVGSNKGDIRLYD 604 (794)
T ss_pred Eec-CCceEEEEeCCCcEEeec
Confidence 654 446799999999999998
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=92.96 E-value=2 Score=45.32 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CCCCCeeEEEEcCCc-----eeeeCCCeE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MYGLPIRDIKFHDNY-----VLSMDSSVV 94 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~~~pI~sI~F~~d~-----l~Ssdd~~I 94 (248)
...|..+.|++++..|+..-.+ .|.||-...-.......- .....+..+.|||.. +++.+.+..
T Consensus 304 ~~~v~~l~Wn~ds~iLAv~~~~---------~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~ 374 (928)
T PF04762_consen 304 EEKVIELAWNSDSEILAVWLED---------RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYE 374 (928)
T ss_pred CceeeEEEECCCCCEEEEEecC---------CceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEE
Confidence 4578889999988877776655 599999887655433211 112346669999864 333333322
Q ss_pred EE---EECCCCC--------EEEEeec----------------------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 95 KI---WSKDNGS--------LFTCIES----------------------GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 95 KI---WD~~tGk--------~~~tie~----------------------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.. |+...+. .+..+.+ .-+++|++++|++++..+++-..|++|.+|.
T Consensus 375 ~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~ 454 (928)
T PF04762_consen 375 IYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE 454 (928)
T ss_pred EEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence 21 4443221 1222222 0157899999999998899999999999998
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
.+.
T Consensus 455 ~~~ 457 (928)
T PF04762_consen 455 WDL 457 (928)
T ss_pred ecC
Confidence 543
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=92.92 E-value=1.4 Score=41.16 Aligned_cols=125 Identities=12% Similarity=0.089 Sum_probs=70.1
Q ss_pred EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-C----------CC
Q psy2083 27 NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D----------SS 92 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d----------d~ 92 (248)
...++|++..++-+-+.+ |+...+|+++|+.+++.+...-.. ..-.++.|.+++ +.+. + ..
T Consensus 128 ~~~~Spdg~~la~~~s~~---G~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDG---GSEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEETTTSSEEEEEEEET---TSSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eeeECCCCCEEEEEecCC---CCceEEEEEEECCCCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 456677776655332211 122248999999999776543111 112349999995 3333 2 33
Q ss_pred eEEEEECCCCCE--EEEeecCCCCC-eeEEEEeCCCCEEEEEeCC-Ce-EEEEEcCCCC---CCCCcccccc
Q psy2083 93 VVKIWSKDNGSL--FTCIESGDQTQ-FNNLCHIPESGMMFIANEN-KK-ILTYYIPSLG---PAPKWCGFLD 156 (248)
Q Consensus 93 ~IKIWD~~tGk~--~~tie~~h~~~-In~l~~~pdsgll~sa~ed-~~-I~~w~Ip~lG---~aP~wcs~ld 156 (248)
.|..|.+.++.. ...++..+..- .-++..++|+..|++.+.. .. -.+|.++.-. +...|.-...
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~ 274 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSP 274 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeC
Confidence 588888877643 24455411222 5578899999998865543 44 6777776644 3455554433
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=92.74 E-value=4.9 Score=35.92 Aligned_cols=108 Identities=19% Similarity=0.362 Sum_probs=64.3
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC---CceeEEe---cC----CCCCCeeEEEEcCCc----ee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA---DKPLRVK---DH----MYGLPIRDIKFHDNY----VL 87 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs---~~pl~~~---~h----~~~~pI~sI~F~~d~----l~ 87 (248)
+..+-.+++.+.++.++++-+.+ -.+||-++. +..+... ++ ..-..+.+|+|+|.. |+
T Consensus 117 N~G~EGla~D~~~~~L~v~kE~~--------P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliL 188 (248)
T PF06977_consen 117 NKGFEGLAYDPKTNRLFVAKERK--------PKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLIL 188 (248)
T ss_dssp SS--EEEEEETTTTEEEEEEESS--------SEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEE
T ss_pred CcceEEEEEcCCCCEEEEEeCCC--------ChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEE
Confidence 45688999999888888887765 567888775 3222221 11 112457889999985 77
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCC---------CCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQ---------TQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~---------~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|..++.|-+.| .+|+++..+.-. . ...-.+||.|+| .|.+.+|-+....|
T Consensus 189 S~es~~l~~~d-~~G~~~~~~~L~-~g~~gl~~~~~QpEGIa~d~~G-~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 189 SDESRLLLELD-RQGRVVSSLSLD-RGFHGLSKDIPQPEGIAFDPDG-NLYIVSEPNLFYRF 247 (248)
T ss_dssp ETTTTEEEEE--TT--EEEEEE-S-TTGGG-SS---SEEEEEE-TT---EEEEETTTEEEEE
T ss_pred ECCCCeEEEEC-CCCCEEEEEEeC-CcccCcccccCCccEEEECCCC-CEEEEcCCceEEEe
Confidence 88899999999 569988877641 1 135579999987 56667776654443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.98 Score=44.76 Aligned_cols=106 Identities=9% Similarity=0.063 Sum_probs=63.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceee---eecCCeeEEEEcCCCceeEEecC-CCCCCee-EEEEcCCc--eeeeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKIL---TYYIPAFYLYDIRADKPLRVKDH-MYGLPIR-DIKFHDNY--VLSMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~---~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~-sI~F~~d~--l~Ssdd~~IK 95 (248)
..|--+.|+|...+|++=+....+. -..-.++.|||||+|.....+.- .-+.++. =..||.|. ++..--.+|.
T Consensus 250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sis 329 (698)
T KOG2314|consen 250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSIS 329 (698)
T ss_pred CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEE
Confidence 3678888899877787654432100 00114899999999965443211 0112222 34577665 5555567899
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
|++..+-.++-.=.-. ...|.++.|+|.+.+|+
T Consensus 330 IyEtpsf~lld~Kslk-i~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 330 IYETPSFMLLDKKSLK-ISGIRDFSWSPTSNLLA 362 (698)
T ss_pred EEecCceeeecccccC-CccccCcccCCCcceEE
Confidence 9998753332211111 36789999999988775
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=92.63 E-value=1.2 Score=44.81 Aligned_cols=81 Identities=15% Similarity=0.202 Sum_probs=52.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee----------EEecCCCCCCeeEEEE
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL----------RVKDHMYGLPIRDIKF 81 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl----------~~~~h~~~~pI~sI~F 81 (248)
+.+.++.-+ .....+.++||+.+++++|..+ ++|.++|+.+-+.+ ....-.-|..=.-.+|
T Consensus 312 ~v~~yIPVG--KsPHGV~vSPDGkylyVanklS-------~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaF 382 (635)
T PRK02888 312 ALTRYVPVP--KNPHGVNTSPDGKYFIANGKLS-------PTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAF 382 (635)
T ss_pred ceEEEEECC--CCccceEECCCCCEEEEeCCCC-------CcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEE
Confidence 466667765 4567889999999888877754 49999999986531 1111111232345788
Q ss_pred cCCc-eeee--CCCeEEEEECCC
Q psy2083 82 HDNY-VLSM--DSSVVKIWSKDN 101 (248)
Q Consensus 82 ~~d~-l~Ss--dd~~IKIWD~~t 101 (248)
.+++ ..++ -|..|-.||+.+
T Consensus 383 Dg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 383 DGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCCCCEEEeEeecceeEEEehHH
Confidence 8887 3333 455666799876
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.16 Score=52.68 Aligned_cols=122 Identities=9% Similarity=0.152 Sum_probs=80.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM- 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss- 89 (248)
..+|..+ ....++++|+-+...|+.|+ ..|.|++|.+-+|...-.. ..|+.+|+.|.-+.++ +.++
T Consensus 1094 w~~frd~-~~~fTc~afs~~~~hL~vG~--------~~Geik~~nv~sG~~e~s~-ncH~SavT~vePs~dgs~~Ltsss 1163 (1516)
T KOG1832|consen 1094 WRSFRDE-TALFTCIAFSGGTNHLAVGS--------HAGEIKIFNVSSGSMEESV-NCHQSAVTLVEPSVDGSTQLTSSS 1163 (1516)
T ss_pred chhhhcc-ccceeeEEeecCCceEEeee--------ccceEEEEEccCccccccc-cccccccccccccCCcceeeeecc
Confidence 3344443 34445555554444444433 3469999999999654443 2445999999999887 4443
Q ss_pred CCC-eEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc
Q psy2083 90 DSS-VVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN 157 (248)
Q Consensus 90 dd~-~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~ 157 (248)
.++ -.-+|+..+ |...+++.. -.++.|+.....=+.|++.....+|++.. |+-|+.
T Consensus 1164 ~S~PlsaLW~~~s~~~~~Hsf~e-----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT-------~~~l~t 1221 (1516)
T KOG1832|consen 1164 SSSPLSALWDASSTGGPRHSFDE-----DKAVKFSNSLQFRALGTEADDALLYDVQT-------CSPLQT 1221 (1516)
T ss_pred ccCchHHHhccccccCccccccc-----cceeehhhhHHHHHhcccccceEEEeccc-------CcHHHH
Confidence 333 577999864 667777765 13457776665566777778899999987 888877
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.84 Score=45.66 Aligned_cols=87 Identities=6% Similarity=0.126 Sum_probs=62.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCee-EEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIR-DIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~-sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..+-.+.+.|.-.+++.+..++ .|.++=+...+ +++.. |+ .+++ +++|.||+ ++ +=.||+|+|-
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~g--------elli~R~n~qR-lwtip~p~--~~v~~sL~W~~DGkllaVg~kdG~I~L~ 89 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKG--------ELLIHRLNWQR-LWTIPIPG--ENVTASLCWRPDGKLLAVGFKDGTIRLH 89 (665)
T ss_pred cceEEEEEcCccchhheeccCC--------cEEEEEeccce-eEeccCCC--CccceeeeecCCCCEEEEEecCCeEEEE
Confidence 3567788888666666665554 78888777433 55544 54 7777 99999998 33 3368999999
Q ss_pred ECCCCCEEEE--eecCCCCCeeEEEEe
Q psy2083 98 SKDNGSLFTC--IESGDQTQFNNLCHI 122 (248)
Q Consensus 98 D~~tGk~~~t--ie~~h~~~In~l~~~ 122 (248)
|.++|..+.. +.. ..+|.++.|.
T Consensus 90 Dve~~~~l~~~~~s~--e~~is~~~w~ 114 (665)
T KOG4640|consen 90 DVEKGGRLVSFLFSV--ETDISKGIWD 114 (665)
T ss_pred EccCCCceecccccc--ccchheeecc
Confidence 9999998887 444 5677777775
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=91.88 E-value=6.9 Score=34.98 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=74.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIWD~ 99 (248)
..+..+.|.|+++.|+++.+.. +.|.-+|.. ++.+....-.--.-.-.|++..++ +++.+ ++.+-+.+.
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~-------~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEP-------GEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTT-------TEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred CCccccEEcCCCCeEEEEECCC-------CEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 5689999999999999988876 478888864 665554321111346788888776 66664 677777777
Q ss_pred CCC--C----EEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 100 DNG--S----LFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 100 ~tG--k----~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
... . .+..+.. .+...+-.+|+.|.++.|+++.|.....+|-++.+-
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~ 150 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFP 150 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcccc
Confidence 321 1 1233331 123457889999999999999999888888877643
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=91.87 E-value=8.1 Score=35.73 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=69.7
Q ss_pred cchhcCceeEEEe---cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec------CCCCCCe
Q psy2083 6 LRQDKGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD------HMYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~---~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~------h~~~~pI 76 (248)
+|..+|+++.... ..|+-.+.-++..+++..++.....+ -..-.-.-|.+++-.. ++.... ..-...|
T Consensus 143 ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg-~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~ 219 (305)
T PF07433_consen 143 LDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQG-DPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYI 219 (305)
T ss_pred EecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCC-CCCccCCeEEEEcCCC--cceeccCChHHHHhhCCce
Confidence 5677888777732 33356778888877654444432221 1111223444444433 222111 1222568
Q ss_pred eEEEEcCCc---eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe
Q psy2083 77 RDIKFHDNY---VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK 136 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~ 136 (248)
=+|+|++++ .+|| -.+.+-+||..+|+.+....- .++-.++-.+++ ++++.+ .+.
T Consensus 220 gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l---~D~cGva~~~~~-f~~ssG-~G~ 278 (305)
T PF07433_consen 220 GSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL---PDACGVAPTDDG-FLVSSG-QGQ 278 (305)
T ss_pred EEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc---CceeeeeecCCc-eEEeCC-Ccc
Confidence 999999987 3455 467999999999998866543 445555555555 444444 444
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.06 Score=53.79 Aligned_cols=108 Identities=19% Similarity=0.348 Sum_probs=68.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEc---CCceeeeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFH---DNYVLSMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~---~d~l~Ssdd~~IK 95 (248)
...+++|+-.+..++.+|.... .|.++|+|-+ ..+.++.| ..+... ++.+++..|+.|-
T Consensus 155 ~gqns~cwlrd~klvlaGm~sr--------~~~ifdlRqs~~~~~svnTk~v------qG~tVdp~~~nY~cs~~dg~iA 220 (783)
T KOG1008|consen 155 DGQNSVCWLRDTKLVLAGMTSR--------SVHIFDLRQSLDSVSSVNTKYV------QGITVDPFSPNYFCSNSDGDIA 220 (783)
T ss_pred cCccccccccCcchhhcccccc--------hhhhhhhhhhhhhhhhhhhhhc------ccceecCCCCCceeccccCcee
Confidence 3456888886555444544443 7999999954 22334333 344444 4448888899999
Q ss_pred EEE-CCCC-CEEEEeecCCCC----CeeEEEEeCCC-CEEEEEeCC-CeEEEEEcCCC
Q psy2083 96 IWS-KDNG-SLFTCIESGDQT----QFNNLCHIPES-GMMFIANEN-KKILTYYIPSL 145 (248)
Q Consensus 96 IWD-~~tG-k~~~tie~~h~~----~In~l~~~pds-gll~sa~ed-~~I~~w~Ip~l 145 (248)
||| ..+- +++..+..+ +. .+..+++.|-. |++++.+.| ++|..|+|..-
T Consensus 221 iwD~~rnienpl~~i~~~-~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v 277 (783)
T KOG1008|consen 221 IWDTYRNIENPLQIILRN-ENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV 277 (783)
T ss_pred eccchhhhccHHHHHhhC-CCCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence 999 4432 344444321 23 37788999954 777777765 78999987543
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=91.74 E-value=2.2 Score=39.81 Aligned_cols=88 Identities=8% Similarity=0.035 Sum_probs=55.2
Q ss_pred CeeEEEEcCCCceeEEecCCCCC---------Ce-eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGL---------PI-RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLC 120 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~---------pI-~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~ 120 (248)
|.|.-+|..+++.++........ .+ -.+....+. ++++.++.+.-+|.++|+.+-+.+. ..++.+--
T Consensus 79 g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~--~~~~~ssP 156 (394)
T PRK11138 79 GLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV--AGEALSRP 156 (394)
T ss_pred CeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC--CCceecCC
Confidence 58999999999998876433110 01 112333334 5556788999999999998877765 33333211
Q ss_pred EeCCCCEEEEEeCCCeEEEEEc
Q psy2083 121 HIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 121 ~~pdsgll~sa~ed~~I~~w~I 142 (248)
.. .++.++++..++.+..++.
T Consensus 157 ~v-~~~~v~v~~~~g~l~ald~ 177 (394)
T PRK11138 157 VV-SDGLVLVHTSNGMLQALNE 177 (394)
T ss_pred EE-ECCEEEEECCCCEEEEEEc
Confidence 11 2456667777777776664
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.62 Score=46.24 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=81.3
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE----ecCCCCCCeeEEEEcCCc--
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV----KDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~~h~~~~pI~sI~F~~d~-- 85 (248)
+++++ ..| ...|+++.|..+...+++ .|+ -|.|||-=-++|+.. .-|+.+..|+++.=-...
T Consensus 776 CQfTY-~aH-kk~i~~igfL~~lr~i~S--cD~--------giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~il 843 (1034)
T KOG4190|consen 776 CQFTY-QAH-KKPIHDIGFLADLRSIAS--CDG--------GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHIL 843 (1034)
T ss_pred eeeEh-hhc-cCcccceeeeeccceeee--ccC--------cceeecccccchhHhhhcCcccCCCceeEecccCcchhe
Confidence 44444 444 688999999876554433 343 599999877777653 234544556665432222
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++. +...+||++|.+.++-...+.. +-.+-++++++.|.|+.+++|-..|.|-+-+...
T Consensus 844 iAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~ 907 (1034)
T KOG4190|consen 844 IAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARN 907 (1034)
T ss_pred eeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCC
Confidence 333 4578999999999876555542 1125678999999999999998888888877554
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.48 E-value=5.7 Score=36.59 Aligned_cols=110 Identities=16% Similarity=0.216 Sum_probs=64.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eE--EecCCC-CCCeeEEEEcCCc--eee-eC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LR--VKDHMY-GLPIRDIKFHDNY--VLS-MD----- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~--~~~h~~-~~pI~sI~F~~d~--l~S-sd----- 90 (248)
+.+.+..-...+|.|+++ .. -+.++|..++.. .. ....+. ...-|.+...|++ .++ ..
T Consensus 66 ~~~~~~~~~d~~g~Lv~~-~~---------g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~ 135 (307)
T COG3386 66 GGFSSGALIDAGGRLIAC-EH---------GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLG 135 (307)
T ss_pred CCcccceeecCCCeEEEE-cc---------ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccC
Confidence 355666666667766554 33 268888866543 22 222221 1345678888887 222 12
Q ss_pred ----CCeEEEEECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 91 ----SSVVKIWSKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 91 ----d~~IKIWD~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
..+=.+|=.. .|....-+.. +-.--|.+||+||+..|..+-. .+.|+-|...
T Consensus 136 ~~~~~~~G~lyr~~p~g~~~~l~~~-~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 136 KSEERPTGSLYRVDPDGGVVRLLDD-DLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred ccccCCcceEEEEcCCCCEEEeecC-cEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 1122344444 4555555554 3566789999999977777754 4888888765
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=91.16 E-value=4.2 Score=42.24 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=65.2
Q ss_pred eecCCeeEEEE---cCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE--EEEeecCCCCCeeEE
Q psy2083 48 TYYIPAFYLYD---IRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL--FTCIESGDQTQFNNL 119 (248)
Q Consensus 48 ~~~~G~V~LwD---lRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~--~~tie~~h~~~In~l 119 (248)
|+.+|.|..|- +|....-....|.-+.||+.+.|..++ +..+.-..|+++... |+. +..+.. |..++||.
T Consensus 143 Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~-gr~p~~~~ld~-~G~~lnCs 220 (933)
T KOG2114|consen 143 GFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS-GRTPSLKVLDN-NGISLNCS 220 (933)
T ss_pred EecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEec-CCCcceeeecc-CCccceee
Confidence 33346888874 333222223456656899999999886 455667788999988 554 444555 57899999
Q ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 120 CHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 120 ~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
.+++.++.+++|+ +.-+..|+.+.-||
T Consensus 221 s~~~~t~qfIca~-~e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 221 SFSDGTYQFICAG-SEFLYFYDSDGRGP 247 (933)
T ss_pred ecCCCCccEEEec-CceEEEEcCCCcce
Confidence 9999888565555 55677777774443
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=91.08 E-value=1.2 Score=44.62 Aligned_cols=69 Identities=12% Similarity=0.214 Sum_probs=49.3
Q ss_pred CCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEee-cCCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 74 LPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIE-SGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie-~~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
..|.-+.|+|.. ++. ..++-|-|.-.+ .+-+.++. + .-+++ ++||.|||++|++|-.||+|.+-|+..=
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p--~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIP--GENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKG 94 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCC--CCccceeeeecCCCCEEEEEecCCeEEEEEccCC
Confidence 457888999986 332 345545455444 44455665 4 44555 9999999999999999999999997553
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.92 E-value=6.2 Score=36.35 Aligned_cols=104 Identities=18% Similarity=0.257 Sum_probs=63.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--C---ce--eEEecCCCCCCeeEEEEcCCc-ee-eeC-CC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--D---KP--LRVKDHMYGLPIRDIKFHDNY-VL-SMD-SS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~---~p--l~~~~h~~~~pI~sI~F~~d~-l~-Ssd-d~ 92 (248)
..-|.+||+||+..++.+-+.. +.|.-||+-. + .+ ....+...+.|- .++...++ +- ++- .+
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~-------~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PD-G~~vDadG~lw~~a~~~g 234 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPA-------NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPD-GMAVDADGNLWVAAVWGG 234 (307)
T ss_pred EecCceEECCCCCEEEEEeCCC-------CeEEEEecCcccCccCCcceEEEccCCCCCCC-ceEEeCCCCEEEecccCC
Confidence 4558999999987777775553 2677776642 1 11 111222222221 22333334 33 333 33
Q ss_pred -eEEEEECCCCCEEEEeecCCC-CCeeEEEEe-CCCCEEEEEeCCCeE
Q psy2083 93 -VVKIWSKDNGSLFTCIESGDQ-TQFNNLCHI-PESGMMFIANENKKI 137 (248)
Q Consensus 93 -~IKIWD~~tGk~~~tie~~h~-~~In~l~~~-pdsgll~sa~ed~~I 137 (248)
.|.+|+++ |+.+..++. + ..+.++||. |+.+.|++.+....+
T Consensus 235 ~~v~~~~pd-G~l~~~i~l--P~~~~t~~~FgG~~~~~L~iTs~~~~~ 279 (307)
T COG3386 235 GRVVRFNPD-GKLLGEIKL--PVKRPTNPAFGGPDLNTLYITSARSGM 279 (307)
T ss_pred ceEEEECCC-CcEEEEEEC--CCCCCccceEeCCCcCEEEEEecCCCC
Confidence 89999999 999999997 4 778888995 556667766655533
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=90.92 E-value=6.4 Score=37.56 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=30.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---c----CCCCCCeeEEEEc
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---D----HMYGLPIRDIKFH 82 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~----h~~~~pI~sI~F~ 82 (248)
++.|..++.+ +=|.+++|..+ |.+.|.|+|.+.-+... + +.....|++++|.
T Consensus 86 ~g~vtal~~S-~iGFvaigy~~--------G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~ 144 (395)
T PF08596_consen 86 QGPVTALKNS-DIGFVAIGYES--------GSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFS 144 (395)
T ss_dssp S-SEEEEEE--BTSEEEEEETT--------SEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEE
T ss_pred CCcEeEEecC-CCcEEEEEecC--------CcEEEEECCCCeEEeeccccccccccccccCeeEEEEE
Confidence 5677777665 46666555544 59999999988655431 2 1223468888886
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=90.82 E-value=0.7 Score=30.35 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=23.6
Q ss_pred CeeEEEEeCCCC--cEEEeecCceeeeecCCeeEEEEcCCC
Q psy2083 24 QFNNLCHIPESG--MMFIANENKKILTYYIPAFYLYDIRAD 62 (248)
Q Consensus 24 ~V~~~~~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~ 62 (248)
.|.++.|+|+++ -|++-+++. |.|-|+|+|+.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~-------g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQ-------GRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccC-------CeEEEEEcccC
Confidence 577888998776 355555654 59999999963
|
It contains a characteristic DLL sequence motif. |
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.48 E-value=1.2 Score=43.71 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=67.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eC---------
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MD--------- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sd--------- 90 (248)
=.++.++++|-|.++++.-.. -|.+|+--+..-+...-| ..|+.+.|+|.+ |++ +.
T Consensus 33 ~p~~~~~~SP~G~~l~~~~~~---------~V~~~~g~~~~~l~~~~~---~~V~~~~fSP~~kYL~tw~~~pi~~pe~e 100 (561)
T COG5354 33 WPVAYVSESPLGTYLFSEHAA---------GVECWGGPSKAKLVRFRH---PDVKYLDFSPNEKYLVTWSREPIIEPEIE 100 (561)
T ss_pred cchhheeecCcchheehhhcc---------ceEEccccchhheeeeec---CCceecccCcccceeeeeccCCccChhhc
Confidence 467889999977666665444 489999887654555545 468999999986 332 22
Q ss_pred ------CCeEEEEECCCCCEEEEeecCCCCC--ee-EEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 91 ------SSVVKIWSKDNGSLFTCIESGDQTQ--FN-NLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 91 ------d~~IKIWD~~tGk~~~tie~~h~~~--In-~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++.+.+||..+|..+.++..- ..+ .. -+.|+-|..+++=- -...+++|.
T Consensus 101 ~sp~~~~n~~~vwd~~sg~iv~sf~~~-~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e 158 (561)
T COG5354 101 ISPFTSKNNVFVWDIASGMIVFSFNGI-SQPYLGWPVLKFSIDDKYVARV-VGSSLYIHE 158 (561)
T ss_pred cCCccccCceeEEeccCceeEeecccc-CCcccccceeeeeecchhhhhh-ccCeEEEEe
Confidence 235899999999999988751 222 22 34555555443322 233444554
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=90.36 E-value=5.7 Score=40.23 Aligned_cols=108 Identities=10% Similarity=0.154 Sum_probs=64.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc--CCc--eee-eCCCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH--DNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~--~d~--l~S-sdd~~IKIWD 98 (248)
+..-+..++ -+.++.+.+++ .++.|||.+++..-.........+|.++.|. |++ +++ +-.+.|.++-
T Consensus 31 ~~~li~gss-~~k~a~V~~~~-------~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSS-IKKIAVVDSSR-------SELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred CcceEeecc-cCcEEEEECCC-------CEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 333444444 34455555544 3899999999863322222225799999986 444 444 6677777875
Q ss_pred CC-----C----CCEEEEee--cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 99 KD-----N----GSLFTCIE--SGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 99 ~~-----t----Gk~~~tie--~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
-- + -.++..+. ...+.+|.+.+|-+||.+++.+ ++++.+|+
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d 154 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD 154 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence 42 1 12333332 2224789999999998766555 45666664
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=90.12 E-value=8.6 Score=40.74 Aligned_cols=110 Identities=9% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEec----CCCCCCeeEEEEcCCc---eeeeCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKD----HMYGLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~----h~~~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
..+...+|.+.+..++.+.+... ..+.|.+.-.+... .+...+ -.....|.++.|.++. ++...+|
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~----~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~G 97 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNE----IDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASG 97 (928)
T ss_pred cccceEEEecCCCeEEEEECCCC----cceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCc
Confidence 35777888776666544433321 12345555444433 222222 1223679999999886 3344566
Q ss_pred eEEEE----ECCCC--CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 93 VVKIW----SKDNG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 93 ~IKIW----D~~tG--k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
-|-+. |..+. +.+.+++ ..|.+++|+||+.+|+.+..++++.+-
T Consensus 98 di~~~~~~~~~~~~~~E~VG~vd----~GI~a~~WSPD~Ella~vT~~~~l~~m 147 (928)
T PF04762_consen 98 DIILVREDPDPDEDEIEIVGSVD----SGILAASWSPDEELLALVTGEGNLLLM 147 (928)
T ss_pred eEEEEEccCCCCCceeEEEEEEc----CcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence 55555 44433 3444554 469999999999999999999988776
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=89.88 E-value=2.4 Score=42.90 Aligned_cols=68 Identities=18% Similarity=0.317 Sum_probs=49.3
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE--eCCCCEEEEEeCCCeEEEEEc---CCCCCCCCccc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH--IPESGMMFIANENKKILTYYI---PSLGPAPKWCG 153 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~--~pdsgll~sa~ed~~I~~w~I---p~lG~aP~wcs 153 (248)
++.++...+.|||.+.|.....-.-....+|.++.| .|||..+++.+=+.+|.+|-= -.+...|.|..
T Consensus 45 ~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~ 117 (631)
T PF12234_consen 45 VVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAP 117 (631)
T ss_pred EEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccce
Confidence 666778899999999886443322112578998877 589999999999999999842 22356777874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=89.32 E-value=14 Score=34.82 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC-cee-eeecCCeeEEEEcCCCceeEEecCC------CCCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKI-LTYYIPAFYLYDIRADKPLRVKDHM------YGLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d-~~~-~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI~ 77 (248)
+|+++|+.+-.+..+ ..-.+..+|++..+++++.- .++ -|-.+-.|.+||..+=.|.....-. ....-+
T Consensus 22 iD~d~~k~lGmi~~g---~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~ 98 (342)
T PF06433_consen 22 IDADSGKLLGMIDTG---FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKN 98 (342)
T ss_dssp EETTTTEEEEEEEEE---SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GG
T ss_pred EECCCCcEEEEeecc---cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheeccccc
Confidence 578889988888876 34456678888877765431 222 4445558999999998776532211 012234
Q ss_pred EEEEcCCc---eee--eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 78 DIKFHDNY---VLS--MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 78 sI~F~~d~---l~S--sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~a 148 (248)
...++.|+ ++. +-..+|-|-|+..++.+..+.. +. |.-.+|-+ .-+.+.|.||++....+-+-|..
T Consensus 99 ~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~--PG---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~ 170 (342)
T PF06433_consen 99 MFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT--PG---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKE 170 (342)
T ss_dssp GEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG--TS---EEEEEEEETTEEEEEETTSCEEEEEETSTSSE
T ss_pred ceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC--CC---EEEEEecCCCceEEEecCCceEEEEECCCCCE
Confidence 56677765 222 2366788889999998888874 32 33334422 34778888998888877655543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.30 E-value=11 Score=35.31 Aligned_cols=105 Identities=10% Similarity=0.189 Sum_probs=73.8
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee--CCCeEEEEEC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM--DSSVVKIWSK 99 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss--dd~~IKIWD~ 99 (248)
..+..++.+..++....+. ..|.+.|+.+.+-+....-+ .--..+.|++++ ++-+ .+++|-+-|.
T Consensus 77 ~~i~v~~~~~~vyv~~~~~-------~~v~vid~~~~~~~~~~~vG--~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~ 147 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDS-------NTVSVIDTATNTVLGSIPVG--LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDA 147 (381)
T ss_pred cceeeCCCCCeEEEecCCC-------CeEEEEcCcccceeeEeeec--cCCceEEECCCCCEEEEEecccCCceEEEEeC
Confidence 4566677666566555442 38999998777655543323 234678899886 4434 3689999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEE
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~ 141 (248)
.+++...++..+ ..+ ..+++.|+|..+.++. .++.|.+.+
T Consensus 148 ~t~~~~~~~~vG-~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~ 188 (381)
T COG3391 148 ATNKVTATIPVG-NTP-TGVAVDPDGNKVYVTNSDDNTVSVID 188 (381)
T ss_pred CCCeEEEEEecC-CCc-ceEEECCCCCeEEEEecCCCeEEEEe
Confidence 999999886542 345 7899999999777777 567787777
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=89.25 E-value=0.94 Score=47.90 Aligned_cols=68 Identities=21% Similarity=0.367 Sum_probs=47.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC----Cc-eeeeCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD----NY-VLSMDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~----d~-l~Ssdd~~IKI 96 (248)
++.|.+++|+. +|.+.++|-.+ |.|.+||+..++++...+ .++.|...|-|+. +. ++++|.+-. +
T Consensus 130 ~~~Vtsvafn~-dg~~l~~G~~~-------G~V~v~D~~~~k~l~~i~-e~~ap~t~vi~v~~t~~nS~llt~D~~Gs-f 199 (1206)
T KOG2079|consen 130 QGPVTSVAFNQ-DGSLLLAGLGD-------GHVTVWDMHRAKILKVIT-EHGAPVTGVIFVGRTSQNSKLLTSDTGGS-F 199 (1206)
T ss_pred CCcceeeEecC-CCceeccccCC-------CcEEEEEccCCcceeeee-ecCCccceEEEEEEeCCCcEEEEccCCCc-e
Confidence 56788887776 55666666654 599999999999888753 2247877777653 33 778876543 6
Q ss_pred EEC
Q psy2083 97 WSK 99 (248)
Q Consensus 97 WD~ 99 (248)
|..
T Consensus 200 ~~l 202 (1206)
T KOG2079|consen 200 WKL 202 (1206)
T ss_pred EEE
Confidence 764
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=89.10 E-value=8.5 Score=35.25 Aligned_cols=106 Identities=9% Similarity=0.044 Sum_probs=70.8
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE-EcCCc-eeeeCCCeEEEEECCCCCEE
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK-FHDNY-VLSMDSSVVKIWSKDNGSLF 105 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~-F~~d~-l~Ssdd~~IKIWD~~tGk~~ 105 (248)
++.-+++..++..|+.. |.+.--|..+|+.++...-+ ..|-+-+ .-.|. |+++-++.+-+-+.+||...
T Consensus 16 LVV~~dskT~v~igSHs-------~~~~avd~~sG~~~We~ilg--~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~ 86 (354)
T KOG4649|consen 16 LVVCNDSKTLVVIGSHS-------GIVIAVDPQSGNLIWEAILG--VRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQI 86 (354)
T ss_pred EEEecCCceEEEEecCC-------ceEEEecCCCCcEEeehhhC--ceeeeeeEEECCEEEEEEccCcEEEEEecchhhe
Confidence 34445555544444443 47888899999887764333 3333222 13344 78889999999999999777
Q ss_pred EEeecCCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 106 TCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 106 ~tie~~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+.. ...|. .....+++|+|..++.|++.+.-|+..
T Consensus 87 w~f~~--~~~vk~~a~~d~~~glIycgshd~~~yalD~~~ 124 (354)
T KOG4649|consen 87 WNFVI--LETVKVRAQCDFDGGLIYCGSHDGNFYALDPKT 124 (354)
T ss_pred eeeee--hhhhccceEEcCCCceEEEecCCCcEEEecccc
Confidence 66665 33333 245578999999999999998777543
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=88.76 E-value=1.2 Score=29.18 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=25.0
Q ss_pred CeeEEEEeCCCC---EEEEEeCCCeEEEEEcCC
Q psy2083 115 QFNNLCHIPESG---MMFIANENKKILTYYIPS 144 (248)
Q Consensus 115 ~In~l~~~pdsg---ll~sa~ed~~I~~w~Ip~ 144 (248)
.|+++.|+|+++ +|+.+-..+.|+++|+.+
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 588999999777 777777779999999864
|
It contains a characteristic DLL sequence motif. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=88.74 E-value=5 Score=35.11 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=51.9
Q ss_pred eEEEEcC-CCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEE---------------EeecCCCCC
Q psy2083 54 FYLYDIR-ADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFT---------------CIESGDQTQ 115 (248)
Q Consensus 54 V~LwDlR-s~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~---------------tie~~h~~~ 115 (248)
+.+|++. ..++..... . .+|..+...++. ++.-.|+.+.++|..+-.... .+.. ...
T Consensus 18 l~~~~~~~~~~~~~i~~-~--~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~ 92 (275)
T PF00780_consen 18 LYVYDLSDPSKPTRILK-L--SSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPE--TKG 92 (275)
T ss_pred EEEEEecCCccceeEee-c--ceEEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccccccccc--cCC
Confidence 8999993 334444432 2 459999999875 444345999999987643333 2222 345
Q ss_pred eeEEE--EeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 116 FNNLC--HIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 116 In~l~--~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.++ -.+++...++..-.++|.+|...
T Consensus 93 v~~f~~~~~~~~~~~L~va~kk~i~i~~~~ 122 (275)
T PF00780_consen 93 VSFFAVNGGHEGSRRLCVAVKKKILIYEWN 122 (275)
T ss_pred eeEEeeccccccceEEEEEECCEEEEEEEE
Confidence 66555 23455555555556688888643
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=88.22 E-value=10 Score=39.51 Aligned_cols=79 Identities=15% Similarity=0.259 Sum_probs=61.6
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
...|+++.+..++.. +|++... .|.+|-+....|....-..+|.++++..|++.. ++++.+.-+-++|
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~---------~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~ 241 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTE---------QVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYD 241 (933)
T ss_pred CCCceeeEEecCCceeEEEEecc---------eeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEc
Confidence 578999999887766 6777766 699999985556555433567999999999876 7888888899999
Q ss_pred CCCCCEEEEee
Q psy2083 99 KDNGSLFTCIE 109 (248)
Q Consensus 99 ~~tGk~~~tie 109 (248)
...-++--+++
T Consensus 242 sd~~~~cfaf~ 252 (933)
T KOG2114|consen 242 SDGRGPCFAFE 252 (933)
T ss_pred CCCcceeeeec
Confidence 98655555666
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=87.99 E-value=2.5 Score=44.16 Aligned_cols=93 Identities=11% Similarity=0.137 Sum_probs=58.2
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
++|-+++++.+...-+ .+.|.=.+ .. +..+++|... |+|-|=|.++-+++.+.+ .|...|.+...+.+
T Consensus 161 ~~Dl~~~~e~r~~~v~-a~~v~imR-~N-nr~lf~G~t~--------G~V~LrD~~s~~~iht~~-aHs~siSDfDv~GN 228 (1118)
T KOG1275|consen 161 HIDLNTEKETRTTNVS-ASGVTIMR-YN-NRNLFCGDTR--------GTVFLRDPNSFETIHTFD-AHSGSISDFDVQGN 228 (1118)
T ss_pred eeecccceeeeeeecc-CCceEEEE-ec-CcEEEeeccc--------ceEEeecCCcCceeeeee-ccccceeeeeccCC
Confidence 3566666666665433 22343333 22 3445554444 599999999999998864 23377887777776
Q ss_pred ceeee----------CCCeEEEEECCCCCEEEEee
Q psy2083 85 YVLSM----------DSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 85 ~l~Ss----------dd~~IKIWD~~tGk~~~tie 109 (248)
.++++ -|.=||+||+++-+.+.-+.
T Consensus 229 lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~ 263 (1118)
T KOG1275|consen 229 LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ 263 (1118)
T ss_pred eEEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence 64432 26679999999766554443
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=87.79 E-value=9.6 Score=38.33 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=70.8
Q ss_pred CeeEEEEeCCC----CcEEEeecCceeeeecCCeeEEEEcCC-----CceeEEe--cCCCCCCee--EEEEcCCc----e
Q psy2083 24 QFNNLCHIPES----GMMFIANENKKILTYYIPAFYLYDIRA-----DKPLRVK--DHMYGLPIR--DIKFHDNY----V 86 (248)
Q Consensus 24 ~V~~~~~~~~~----g~l~~ag~d~~~~~~~~G~V~LwDlRs-----~~pl~~~--~h~~~~pI~--sI~F~~d~----l 86 (248)
.|..+.|.|.+ --++++.-.. +|-+|-+-- ++.+... +.+-..||. .+.|||.. |
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkk--------hVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~V 129 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKK--------HVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTV 129 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccc--------eEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEE
Confidence 57788888752 2355665554 899999873 2555443 333335554 57899987 5
Q ss_pred eeeCCCeEEEEECC--CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEE
Q psy2083 87 LSMDSSVVKIWSKD--NGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~--tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~ 141 (248)
+++.|-.| +.+.+ +......+.+ ..-|.|.||.+||..|++|-.. =.-++|+
T Consensus 130 LT~~dvSV-~~sV~~d~srVkaDi~~--~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 130 LTARDVSV-LPSVHCDSSRVKADIKT--SGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred EecCceeE-eeeeeeCCceEEEeccC--CceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 66666555 45544 3455666766 7899999999999888877644 3556776
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.75 E-value=24 Score=33.08 Aligned_cols=127 Identities=14% Similarity=0.204 Sum_probs=85.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+-+...++.-+ .....+++.|+++.+..+.... .+++|.+-|-.+.+.+....-+ ..| ..+.+.|++
T Consensus 101 id~~~~~~~~~~~vG--~~P~~~~~~~~~~~vYV~n~~~-----~~~~vsvid~~t~~~~~~~~vG-~~P-~~~a~~p~g 171 (381)
T COG3391 101 IDTATNTVLGSIPVG--LGPVGLAVDPDGKYVYVANAGN-----GNNTVSVIDAATNKVTATIPVG-NTP-TGVAVDPDG 171 (381)
T ss_pred EcCcccceeeEeeec--cCCceEEECCCCCEEEEEeccc-----CCceEEEEeCCCCeEEEEEecC-CCc-ceEEECCCC
Confidence 444555666666655 2556888999888888776631 1248999999888877763222 146 899999997
Q ss_pred ----eeeeCCCeEEEEECCCCCEEE-E----eecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcC
Q psy2083 86 ----VLSMDSSVVKIWSKDNGSLFT-C----IESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIP 143 (248)
Q Consensus 86 ----l~Ssdd~~IKIWD~~tGk~~~-t----ie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip 143 (248)
+..++++.|.+.|..+..... + +.. ......+.+.|+|..+.++.+.. ++...+..
T Consensus 172 ~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~--~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~ 239 (381)
T COG3391 172 NKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGV--GTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTA 239 (381)
T ss_pred CeEEEEecCCCeEEEEeCCCcceecccccccccc--CCCCceEEECCCCCEEEEEeccCCCceEEEEeCC
Confidence 333468999999977655542 1 222 23345678999999888887765 66666543
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=87.69 E-value=3.3 Score=41.02 Aligned_cols=105 Identities=24% Similarity=0.420 Sum_probs=63.7
Q ss_pred CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----------eee-eCCCeEEEEECC-
Q psy2083 33 ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----------VLS-MDSSVVKIWSKD- 100 (248)
Q Consensus 33 ~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----------l~S-sdd~~IKIWD~~- 100 (248)
++.+++.-|+.. ..+.--||.-|+-+-..+.. ..| =|.|.|+. +++ |+.++.|| |++
T Consensus 478 dssli~~dg~~~-------~kLykmDIErGkvveeW~~~--ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrI-DPR~ 546 (776)
T COG5167 478 DSSLIYLDGGER-------DKLYKMDIERGKVVEEWDLK--DDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRI-DPRA 546 (776)
T ss_pred CcceEEecCCCc-------ccceeeecccceeeeEeecC--Ccc-eeecCCchhHHhcCccceEEeecccceEEe-cccc
Confidence 455555444442 14555677777766655433 233 67787752 666 45556665 554
Q ss_pred CCCEEEEeecCC---CCCeeEEEEeCCCCEEEEEeCCCeEEEEE---------cCCCCCCC
Q psy2083 101 NGSLFTCIESGD---QTQFNNLCHIPESGMMFIANENKKILTYY---------IPSLGPAP 149 (248)
Q Consensus 101 tGk~~~tie~~h---~~~In~l~~~pdsgll~sa~ed~~I~~w~---------Ip~lG~aP 149 (248)
.|.-+...+..+ ....+| .....+|+|++|++.|.|++|+ +|.||.|=
T Consensus 547 ~gNKi~v~esKdY~tKn~Fss-~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aI 606 (776)
T COG5167 547 RGNKIKVVESKDYKTKNKFSS-GMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAI 606 (776)
T ss_pred cCCceeeeeehhccccccccc-cccccCceEEEecCCCceeeehhhcchhhhcCcccccce
Confidence 454444444310 122322 2235789999999999999998 78888874
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=86.48 E-value=14 Score=35.75 Aligned_cols=118 Identities=10% Similarity=0.299 Sum_probs=64.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----------ceeEEecCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----------KPLRVKDHMYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----------~pl~~~~h~~~~ 74 (248)
+|..+|+.++.++-. .|..+.+++++.+++..+.+. +.+++-... ..+... |.-..
T Consensus 131 yDw~~~~~i~~i~v~---~vk~V~Ws~~g~~val~t~~~---------i~il~~~~~~~~~~~~~g~e~~f~~~-~E~~~ 197 (443)
T PF04053_consen 131 YDWETGKLIRRIDVS---AVKYVIWSDDGELVALVTKDS---------IYILKYNLEAVAAIPEEGVEDAFELI-HEISE 197 (443)
T ss_dssp E-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S-S---------EEEEEE-HHHHHHBTTTB-GGGEEEE-EEE-S
T ss_pred EEhhHcceeeEEecC---CCcEEEEECCCCEEEEEeCCe---------EEEEEecchhcccccccCchhceEEE-EEecc
Confidence 566788999998864 488888888877777777764 555443322 012222 22126
Q ss_pred CeeEEEEcCCc-eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 75 PIRDIKFHDNY-VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 75 pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.|++..|..+- +.+... .+|-+ -+|+ .+.+++ .++-=+...|+.+.++....+.+|..|.++
T Consensus 198 ~IkSg~W~~d~fiYtT~~-~lkYl--~~Ge~~~i~~ld----~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 198 RIKSGCWVEDCFIYTTSN-HLKYL--VNGETGIIAHLD----KPLYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp --SEEEEETTEEEEE-TT-EEEEE--ETTEEEEEEE-S----S--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred eeEEEEEEcCEEEEEcCC-eEEEE--EcCCcceEEEcC----CceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 89999999887 555555 67773 3343 334443 234445667888899999999999999875
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=86.36 E-value=3.1 Score=39.04 Aligned_cols=56 Identities=18% Similarity=0.388 Sum_probs=40.7
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee--eCCCeEEEEECCCCCEEEEeec
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS--MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S--sdd~~IKIWD~~tGk~~~tie~ 110 (248)
.|=.||+.+++-+....-. .+|.+|+.+.+. |.+ ..++.+-|||..+|+.+.+++.
T Consensus 270 eVWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 4677788888777665433 578999999886 433 3578999999999999999985
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=85.66 E-value=1.1 Score=45.76 Aligned_cols=109 Identities=6% Similarity=0.096 Sum_probs=68.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc------
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY------ 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~------ 85 (248)
..+++++| ++.|.-+-+....+ .+++++.+ |-|-+|=+-.+...-. ....+..-|.+++|+.++
T Consensus 63 mNQtLeGH-~~sV~vvTWNe~~Q-KLTtSDt~-------GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIv 133 (1189)
T KOG2041|consen 63 MNQTLEGH-NASVMVVTWNENNQ-KLTTSDTS-------GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIV 133 (1189)
T ss_pred hhhhhccC-cceEEEEEeccccc-cccccCCC-------ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEE
Confidence 45677887 56666555555444 44555443 5899999998854321 123445678899999875
Q ss_pred ------eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ------VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ------l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++-|+. |||..+ +++ .-...+.++||...++.+-..+.+++|+
T Consensus 134 YeDGavIVGsvdGN-RIwgKe-------Lkg---~~l~hv~ws~D~~~~Lf~~ange~hlyd 184 (1189)
T KOG2041|consen 134 YEDGAVIVGSVDGN-RIWGKE-------LKG---QLLAHVLWSEDLEQALFKKANGETHLYD 184 (1189)
T ss_pred EccCCEEEEeeccc-eecchh-------cch---heccceeecccHHHHHhhhcCCcEEEec
Confidence 33332321 466543 121 1223567889998888888888888887
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=85.39 E-value=13 Score=37.30 Aligned_cols=118 Identities=8% Similarity=0.130 Sum_probs=68.0
Q ss_pred eeEEEEeCCCCcEEEeecCcee--eee--cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEE--
Q psy2083 25 FNNLCHIPESGMMFIANENKKI--LTY--YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKI-- 96 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~--~~~--~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKI-- 96 (248)
...-.|+|+++.+.++.....+ ... ..|.+.+.++..+.+-. .. +.+|.++.|+||+ |+-.-++.|.+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~--~g~Issl~wSpDG~RiA~i~~g~v~Va~ 474 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RV--PGPISELQLSRDGVRAAMIIGGKVYLAV 474 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--cc--CCCcCeEEECCCCCEEEEEECCEEEEEE
Confidence 5566778887776665432111 111 12455555776665433 22 3679999999998 22212355544
Q ss_pred -EECCCCCEEEE-----eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 97 -WSKDNGSLFTC-----IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 97 -WD~~tGk~~~t-----ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
=....|. ... +.+.-...+.++.|.+++.++ ++.+++.-.+|.++--|+.
T Consensus 475 Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 475 VEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSN 530 (591)
T ss_pred EEeCCCCc-eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcc
Confidence 3434454 221 222101235789999999865 6666777778988776665
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=85.01 E-value=10 Score=36.91 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=55.0
Q ss_pred cCCeeEEEEcCCCceeEEecCCCCC-CeeEEEEcCCc------eeee-CCCeEEEEECCCCC----EEEEeecC----C-
Q psy2083 50 YIPAFYLYDIRADKPLRVKDHMYGL-PIRDIKFHDNY------VLSM-DSSVVKIWSKDNGS----LFTCIESG----D- 112 (248)
Q Consensus 50 ~~G~V~LwDlRs~~pl~~~~h~~~~-pI~sI~F~~d~------l~Ss-dd~~IKIWD~~tGk----~~~tie~~----h- 112 (248)
+-.++.+||+.+++++++.+-+.+. -...|.|..+- +-++ ...+.++|-.+.|+ .+.++.+. .
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 3458999999999999998766443 35578887652 3344 34455666545553 22233220 0
Q ss_pred -----------CCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 113 -----------QTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 113 -----------~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+.=|+++.+|.|..+|.+.+- ++.|+.|+|..
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 123689999999999998884 69999999976
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=84.16 E-value=28 Score=33.20 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=62.5
Q ss_pred eeEEEEcCCC---------ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeec-------CCCC
Q psy2083 53 AFYLYDIRAD---------KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIES-------GDQT 114 (248)
Q Consensus 53 ~V~LwDlRs~---------~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~-------~h~~ 114 (248)
.-.|-|++.. .|+.... ....+|++++.+.=+ .++..++.+.|-|.+.-..+.+-.. ....
T Consensus 58 ~~~l~di~~r~~~~~~~gf~P~~l~~-~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~ 136 (395)
T PF08596_consen 58 PGKLTDISDRAPPSLKEGFLPLTLLD-AKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSS 136 (395)
T ss_dssp S-SEEE-GGG--TT-SEEEEEEEEE----S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS---
T ss_pred CcceEEehhhCCcccccccCchhhee-ccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeecccccccccccccc
Confidence 4567788764 2443333 336899999998777 4445899999999986555554221 0134
Q ss_pred CeeEEEEeC-----CC---CEEEEEeCCCeEEEEEcCCCCCCCCccccccchh
Q psy2083 115 QFNNLCHIP-----ES---GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLT 159 (248)
Q Consensus 115 ~In~l~~~p-----ds---gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~t 159 (248)
.|++++|.. |+ -+|++|.+.|++.+|.|-. .+..+|.-.+...|
T Consensus 137 ~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp-~~~g~f~v~~~~~~ 188 (395)
T PF08596_consen 137 YVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILP-SSNGRFSVQFAGAT 188 (395)
T ss_dssp -EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE--GGG-EEEEEEEEE
T ss_pred CeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEec-CCCCceEEEEeecc
Confidence 677888851 22 5788999999999998721 23456775555555
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=84.00 E-value=7.5 Score=41.83 Aligned_cols=86 Identities=10% Similarity=0.128 Sum_probs=53.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee----eCCCeEEEEECCCCCEEE----EeecCCCCCeeEEEEe
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS----MDSSVVKIWSKDNGSLFT----CIESGDQTQFNNLCHI 122 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S----sdd~~IKIWD~~tGk~~~----tie~~h~~~In~l~~~ 122 (248)
+|++||-. +..-.+ .-....-=.+++|-|.+ +++ .++..|.++..+ |-.-. .+.. +..+++.++|+
T Consensus 223 kirV~drE-g~Lns~-se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~-de~~ve~L~Wn 298 (1265)
T KOG1920|consen 223 KIRVYDRE-GALNST-SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPL-DEKEVEELAWN 298 (1265)
T ss_pred eEEEeccc-chhhcc-cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcc-cccchheeeec
Confidence 89999976 321111 00000112578899987 332 245578788765 43222 2222 24569999999
Q ss_pred CCCCEEEE---EeCCCeEEEEEc
Q psy2083 123 PESGMMFI---ANENKKILTYYI 142 (248)
Q Consensus 123 pdsgll~s---a~ed~~I~~w~I 142 (248)
.+|.+|++ ..+...|++|++
T Consensus 299 s~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 299 SNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred CCCCceeeeecccccceEEEEEe
Confidence 99999998 667777999874
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=83.94 E-value=31 Score=31.86 Aligned_cols=103 Identities=10% Similarity=0.115 Sum_probs=58.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKD 100 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~ 100 (248)
.++++.+.|+ +.+++++..+ .+.. ..+.+ +............++++.+.+++ ++.+..+.+.+=..+
T Consensus 174 ~~~~i~~~~~-g~~v~~g~~G--------~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d 243 (334)
T PRK13684 174 VVRNLRRSPD-GKYVAVSSRG--------NFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPD 243 (334)
T ss_pred eEEEEEECCC-CeEEEEeCCc--------eEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCC
Confidence 4566666664 4455556554 2221 11222 22222223334679999999887 555667776543456
Q ss_pred CCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 101 NGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 101 tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
.|...+.+... ....+.++.+.|++.+++ ++.++.+
T Consensus 244 ~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v 282 (334)
T PRK13684 244 DLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTL 282 (334)
T ss_pred CCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeE
Confidence 67766654320 023577889999877555 4455644
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=83.93 E-value=7.2 Score=34.04 Aligned_cols=68 Identities=12% Similarity=0.202 Sum_probs=42.3
Q ss_pred CCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEe-------ec------CCCCCeeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 74 LPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCI-------ES------GDQTQFNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 74 ~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~ti-------e~------~h~~~In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
.|+-.+....+. ++-+.++.+.+||+.+++.+..- .. .....|.++.+..+|--|++ -.++....
T Consensus 13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~-lsng~~y~ 91 (219)
T PF07569_consen 13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVT-LSNGDSYS 91 (219)
T ss_pred CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEE-EeCCCEEE
Confidence 345555554444 44467889999999988764432 10 01457888888866655544 44577777
Q ss_pred EEc
Q psy2083 140 YYI 142 (248)
Q Consensus 140 w~I 142 (248)
|+.
T Consensus 92 y~~ 94 (219)
T PF07569_consen 92 YSP 94 (219)
T ss_pred ecc
Confidence 763
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=83.77 E-value=12 Score=35.58 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=50.2
Q ss_pred EEEEeCCCCcEEEeecCcee--eeecCC-eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 27 NLCHIPESGMMFIANENKKI--LTYYIP-AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~--~~~~~G-~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
.++..|.||.++..-++.++ ++..-. .|.+|+.. |+++....-.. ..|.++.|+.+. |+=.+|++++++|..
T Consensus 33 ~va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e~LvvV~~dG~v~vy~~~- 109 (410)
T PF04841_consen 33 IVAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDEELVVVQSDGTVRVYDLF- 109 (410)
T ss_pred eEEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECC-CCEEEEEECCCCeEEEEEcCCEEEEEeCC-
Confidence 34556778888777666333 222333 49999986 45555432222 689999998876 555799999999987
Q ss_pred CCE
Q psy2083 102 GSL 104 (248)
Q Consensus 102 Gk~ 104 (248)
|+.
T Consensus 110 G~~ 112 (410)
T PF04841_consen 110 GEF 112 (410)
T ss_pred Cce
Confidence 655
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=83.40 E-value=8.6 Score=37.35 Aligned_cols=123 Identities=8% Similarity=0.080 Sum_probs=68.1
Q ss_pred eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-ee------------------eeCCCeEEEEECCCCCEEEE
Q psy2083 47 LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VL------------------SMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 47 ~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~------------------Ssdd~~IKIWD~~tGk~~~t 107 (248)
.++.+|.+...|.+++++++..... ...+..+|+. .+ ...++.|--.|..+|+.+-+
T Consensus 306 ~g~~~G~l~ald~~tG~~~W~~~~~----~~~~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~ 381 (488)
T cd00216 306 HAPKNGFFYVLDRTTGKLISARPEV----EQPMAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWE 381 (488)
T ss_pred EECCCceEEEEECCCCcEeeEeEee----ccccccCCceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeE
Confidence 3444579999999999999876422 0112222322 11 12356677788888887776
Q ss_pred eecC-CC------CCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeec
Q psy2083 108 IESG-DQ------TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVT 178 (248)
Q Consensus 108 ie~~-h~------~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt 178 (248)
.... +. .+...-...-.+++|++++.|+.|..++... -...|-..|. ....-.+...+.++-.||-
T Consensus 382 ~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~t--G~~lW~~~~~---~~~~a~P~~~~~~g~~yv~ 454 (488)
T cd00216 382 KREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATT--GKELWKFRTP---SGIQATPMTYEVNGKQYVG 454 (488)
T ss_pred eeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCC--CceeeEEECC---CCceEcCEEEEeCCEEEEE
Confidence 6541 00 1121111223668899999999999888543 3445553321 1111112223447777765
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=82.75 E-value=29 Score=30.66 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=65.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee--eCCCeEEEE-EC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS--MDSSVVKIW-SK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S--sdd~~IKIW-D~ 99 (248)
.+.+.+.+++++.++.....+ +.-.||=.+.+.+...... +..+..-.|++++ +-+ ..+...+++ +.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~-------~~~~L~~~~~~~~~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~ 95 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGD-------GGRSLYVGPAGGPVRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDS 95 (253)
T ss_pred cccceEECCCCCeEEEEEEcC-------CCCEEEEEcCCCcceeecc--CCccccccccCCCCEEEEEcCCCceEEEEec
Confidence 678888999887776655111 1345555555544333222 2467788899987 333 345566666 33
Q ss_pred CCCCEE-EEeecCCCC-CeeEEEEeCCCCEEEEEe---CCCeEEEEEcC
Q psy2083 100 DNGSLF-TCIESGDQT-QFNNLCHIPESGMMFIAN---ENKKILTYYIP 143 (248)
Q Consensus 100 ~tGk~~-~tie~~h~~-~In~l~~~pdsgll~sa~---ed~~I~~w~Ip 143 (248)
.+|+.. ..+...... .|.+|.++|||..++... .+++|.+--|-
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 444322 122220022 899999999998777766 34777776553
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=82.64 E-value=25 Score=34.19 Aligned_cols=81 Identities=9% Similarity=0.087 Sum_probs=50.7
Q ss_pred CCeeEEEEcCCCceeEEecCCC-------CCCe--eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeE--
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMY-------GLPI--RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN-- 118 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~-------~~pI--~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~-- 118 (248)
+|.|.-.|+++++.++...... +.+. ..+....+. ++++.++.|..+|.+||+.+-+.+. ...+..
T Consensus 365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~--~~~~~a~P 442 (488)
T cd00216 365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT--PSGIQATP 442 (488)
T ss_pred ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC--CCCceEcC
Confidence 5789999999999988765330 0121 122333333 4456789999999999999998886 444432
Q ss_pred EEEeCCCCEEEEEeCC
Q psy2083 119 LCHIPESGMMFIANEN 134 (248)
Q Consensus 119 l~~~pdsgll~sa~ed 134 (248)
+.+..++ .++++..+
T Consensus 443 ~~~~~~g-~~yv~~~~ 457 (488)
T cd00216 443 MTYEVNG-KQYVGVMV 457 (488)
T ss_pred EEEEeCC-EEEEEEEe
Confidence 2334455 44444433
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=82.62 E-value=4.7 Score=35.83 Aligned_cols=110 Identities=8% Similarity=0.102 Sum_probs=65.1
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeE-EEEcCCc---eeeeCCCeEEEEECCCCCEEEEe
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRD-IKFHDNY---VLSMDSSVVKIWSKDNGSLFTCI 108 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~s-I~F~~d~---l~Ssdd~~IKIWD~~tGk~~~ti 108 (248)
.|+-+...+.+.+.|+++|.|.+|...--....- +... ..+|-+ |.-..++ .+++.++.|+-|++.-++.+...
T Consensus 62 e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~-~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~ 140 (238)
T KOG2444|consen 62 EGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSG-EESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV 140 (238)
T ss_pred cceeecccCceEEeecccceEEEecCCccchHHHhhhcc-cccceeccccccccceeEEeccCCceeeeccccCceeeee
Confidence 3444444555566788889999998772111100 0000 011221 1112222 33467899999999988877766
Q ss_pred ecCCC-CCeeEEEEeCCCCEEEEE--eCCCeEEEEEcCCC
Q psy2083 109 ESGDQ-TQFNNLCHIPESGMMFIA--NENKKILTYYIPSL 145 (248)
Q Consensus 109 e~~h~-~~In~l~~~pdsgll~sa--~ed~~I~~w~Ip~l 145 (248)
-. |. .++..+..+..++.|.++ +-|..++.|.+-.+
T Consensus 141 g~-h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 141 GQ-HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cc-ccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 65 45 666677777777777777 77777777776443
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=80.72 E-value=24 Score=34.84 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=43.5
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCee----------EEEEcCCc-eeeeCCCeEEEEECCCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIR----------DIKFHDNY-VLSMDSSVVKIWSKDNG 102 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~----------sI~F~~d~-l~Ssdd~~IKIWD~~tG 102 (248)
++.++.++.+ |.|.-.|.++++.++.++..-...+. .+.+..+. ++++.++.|--.|.+||
T Consensus 69 ~g~vyv~s~~--------g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TG 140 (527)
T TIGR03075 69 DGVMYVTTSY--------SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTG 140 (527)
T ss_pred CCEEEEECCC--------CcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCC
Confidence 4555555444 47888999999999887543111111 13344444 45556777778899999
Q ss_pred CEEEEee
Q psy2083 103 SLFTCIE 109 (248)
Q Consensus 103 k~~~tie 109 (248)
+.+-...
T Consensus 141 k~~W~~~ 147 (527)
T TIGR03075 141 KVVWSKK 147 (527)
T ss_pred CEEeecc
Confidence 9887655
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 248 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 4e-05
Identities = 50/310 (16%), Positives = 86/310 (27%), Gaps = 104/310 (33%)
Query: 21 DQTQFNNLCHIP--ESGMMFIANENKKILTYYIPAFYLYDIRADK---------PLRVKD 69
D HI M +E K +L Y+ D R P R+
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL------DCRPQDLPREVLTTNPRRLS- 331
Query: 70 HMYGLPIRDIKFH-DNYVLSMDSSVVKIWSKDNGSLFTCIESGD-QTQFNNLC------H 121
+ IRD DN+ + I SL +E + + F+ L H
Sbjct: 332 -IIAESIRDGLATWDNWKHVNCDKLTTIIES---SL-NVLEPAEYRKMFDRLSVFPPSAH 386
Query: 122 IP------------ESGMMFIANE---------NKKILTYYIPSL--------------- 145
IP +S +M + N+ K T IPS+
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 146 ----------------GPAPK-----WCGF----LDNLTEELEENIIENVYDDYKFVTRQ 180
P + L N+ + V+ D++F+ Q
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL-EQ 505
Query: 181 ELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAP-FE-----FEEFKKKKIRERI 234
++ S+L ++ Y+ + P +E +F K I
Sbjct: 506 KIRHDSTAWNASGSIL-----NTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560
Query: 235 EQERTRGVQL 244
+ T +++
Sbjct: 561 CSKYTDLLRI 570
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.84 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.81 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.81 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.81 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.8 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.8 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.8 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.79 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.79 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.79 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.79 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.79 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.78 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.77 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.77 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.77 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.76 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.76 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.76 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.76 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.76 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.75 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.75 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.74 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.74 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.73 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.73 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.73 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.73 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.73 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.73 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.73 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.72 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.72 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.72 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.72 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.72 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.71 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.71 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.71 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.71 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.71 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.7 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.7 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.7 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.7 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.7 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.7 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.7 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.7 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.7 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.7 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.69 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.69 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.69 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.69 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.69 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.69 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.68 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.68 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.68 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.68 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.68 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.68 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.68 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.68 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.67 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.67 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.67 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.67 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.66 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.66 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.66 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.66 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.66 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.65 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.65 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.64 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.64 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.64 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.64 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.64 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.63 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.63 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.63 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.63 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.63 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.63 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.63 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.62 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.62 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.62 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.62 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.62 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.61 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.61 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.6 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.6 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.6 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.6 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.58 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.58 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.58 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.58 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.57 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.57 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.57 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.57 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.56 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.56 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.56 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.56 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.55 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.55 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.55 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.54 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.54 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.54 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.54 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.53 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.52 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.52 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.52 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.51 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.49 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.47 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.47 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.29 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.26 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.26 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.26 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.25 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.2 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.2 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.16 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.16 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.16 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.15 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.13 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.12 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.11 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.1 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.08 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.07 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.02 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.01 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.98 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.98 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.98 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.98 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.96 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.95 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.95 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.89 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.87 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.85 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.83 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.83 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.78 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.77 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.75 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.73 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.73 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.7 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.68 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.65 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.58 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.55 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.49 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.47 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.46 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.45 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.45 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.45 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.45 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.42 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.41 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.41 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.41 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.4 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.4 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.38 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.36 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.35 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.34 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.32 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.31 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.29 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.17 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.17 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.14 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.13 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.05 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.05 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.02 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.94 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.91 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.88 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 97.88 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.84 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.84 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.83 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 97.82 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.79 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.79 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 97.78 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.77 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.75 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.74 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.72 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.71 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.71 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.68 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 97.58 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.58 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.55 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.52 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.51 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.48 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.41 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.41 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.41 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.39 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.39 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.39 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.38 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.36 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.35 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.34 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.32 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.31 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.3 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.29 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.24 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.23 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.18 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.13 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.08 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.07 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.03 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.95 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.92 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 96.71 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 96.68 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 96.64 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.61 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.6 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.59 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.57 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.56 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.4 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.33 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 96.2 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 96.19 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 96.18 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.81 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 95.76 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 95.57 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 95.56 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.48 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 95.45 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 95.39 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 95.3 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 95.26 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 95.22 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 94.78 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 94.75 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.72 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 94.66 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 94.66 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 94.52 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 94.47 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 94.34 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 94.27 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 93.74 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 93.71 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 93.67 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 92.83 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 92.54 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 91.97 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 91.94 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 91.93 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 91.64 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 91.6 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 91.29 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 90.85 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 90.53 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 90.17 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 89.67 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 89.62 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 89.6 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 89.2 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 88.92 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 88.92 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 88.34 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 88.22 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 87.9 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 87.81 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 87.42 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 85.75 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 85.56 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 85.55 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 83.64 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 83.31 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 82.89 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 82.63 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 81.8 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 81.57 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 81.27 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 80.46 |
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.1e-20 Score=163.01 Aligned_cols=127 Identities=15% Similarity=0.230 Sum_probs=111.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| ...|.+++|+|++.++++++.|+ +|++||+++++++.... +|..+|.+++|+|++
T Consensus 191 wd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg--------~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 191 FDIATGKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDG--------YIKIYDVQHANLAGTLS-GHASWVLNVAFCPDD 260 (321)
T ss_dssp EETTTTEEEEEECCC-SSCCCEEEECTTSCEEEEECTTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEccc-CCceeEEEEcCCCCEEEEEcCCC--------eEEEEECCCcceeEEEc-CCCCceEEEEECCCC
Confidence 466788899998876 68999999999888777777764 99999999988776542 345899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ +++.|++|+|||.++++++.++.+ |...|++++|+|++.+|++++.|++|++|++|
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4 456899999999999999999998 69999999999999999999999999999987
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-19 Score=156.25 Aligned_cols=126 Identities=13% Similarity=0.219 Sum_probs=109.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-CCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-YGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-~~~pI~sI~F~~d 84 (248)
.|..+|++..++.+| .+.|++++|+|++..+++++.|+ +|++||+++++++....|. +..+|++++|+|+
T Consensus 211 wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~--------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 211 WDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGSDDA--------TCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTTCSEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EECCCCeeEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCC--------cEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 456778888888876 68999999999887777777774 9999999999888776543 3357999999999
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++++|+.|+|||..+++.+.++.+ |..+|++++|+|||.+|++|+.|++|++|+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeec-CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 8 4456899999999999999999998 699999999999999999999999999995
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.3e-19 Score=154.30 Aligned_cols=157 Identities=11% Similarity=0.209 Sum_probs=121.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss 89 (248)
+..++.+| .+.|.+++|+|++.++++++.|+ +|+|||+.+++++.... .+..+|+++.|+|++ ++++
T Consensus 5 ~~~~~~~h-~~~V~~~~fsp~~~~l~s~~~dg--------~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 5 IKKTFSNR-SDRVKGIDFHPTEPWVLTTLYSG--------RVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp CEEEEEEE-CSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEE
T ss_pred eEEeecCC-CCceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEEC
Confidence 45667776 78999999999988888888775 99999999998877653 234899999999997 4456
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccc--c
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI--I 167 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~--~ 167 (248)
+|++|++||.++|+.+.++++ |...|++++|+|++.+|++|+.|++|++|++..- |+ +...++.+. .
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-----~~-----~~~~~~~h~~~v 143 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN-----WA-----LEQTFEGHEHFV 143 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT-----TE-----EEEEECCCCSCE
T ss_pred CCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC-----cc-----hhhhhcccCCcE
Confidence 899999999999999999998 6999999999999999999999999999997531 11 111122221 1
Q ss_pred ccc-c---CCceeecHhHHhhcCCccc
Q psy2083 168 ENV-Y---DDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 168 ~~~-y---d~y~fvt~~~l~~l~~~~l 190 (248)
..+ + +...|+|-.....+.++.+
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 111 2 4467777777777777664
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-19 Score=158.44 Aligned_cols=129 Identities=12% Similarity=0.159 Sum_probs=105.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcE-EEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l-~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
.|..+|+++.++.+| .+.|++++|+|++..+ ++++.|+ +|+|||+++++++... .+.++..+++++|+|
T Consensus 154 wd~~~~~~~~~~~~h-~~~V~~~~~~~~~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAH-AAQVTCVAASPHKDSVFLSCSEDN--------RILLWDTRCPKPASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTSSSCEEECC----CCCEEEEEECS
T ss_pred EECCCCcEEEEEcCc-CCceEEEEecCCCCCceeeecccc--------ccccccccccceeeeeecceeeccceeeeecC
Confidence 467789999999876 7999999999987655 4555554 9999999999987764 345557899999998
Q ss_pred Cc---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
+. ++ ++.|++|+|||.++++++.++.+ |...|++++|+|+| .+|++|++|++|++|++..
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred CCCcceEEeccCCcEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 64 44 46899999999999999999998 69999999999998 5899999999999999753
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=155.69 Aligned_cols=126 Identities=13% Similarity=0.261 Sum_probs=109.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d 84 (248)
.|.++|+++.++.+| ...|++++|+|++..+++++.|+ +|++||+|+++++.... +.+..++.+++|+|+
T Consensus 225 wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 225 WDMRSGQCVQAFETH-ESDVNSVRYYPSGDAFASGSDDA--------TCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EECCCCcEEEEecCC-CCCeEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 567788999998876 68999999999887777777775 99999999998776653 334468999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ ++ ++.|++|+|||..+|+.+..+.+ |..+|++++|+|||.+|++|+.|++|++|+
T Consensus 296 g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 296 GRLLFAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEECCCcEEEEECCCCceEEEEEC-CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8 44 46899999999999999999998 699999999999999999999999999994
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=152.92 Aligned_cols=128 Identities=13% Similarity=0.273 Sum_probs=109.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++....+..+ ...|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++++|+|++
T Consensus 149 ~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~dg--------~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 149 FGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAIDG--------IINIFDIATGKLLHTLE-GHAMPIRSLTFSPDS 218 (321)
T ss_dssp EETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCCCEEEECTTS
T ss_pred EEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCcEEEEEc-ccCCceeEEEEcCCC
Confidence 355667777777765 57899999999888787777774 99999999998887653 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|+|||.++++...++.+ |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 219 QLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp CEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 44 45799999999999999999998 699999999999999999999999999999864
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-18 Score=148.54 Aligned_cols=128 Identities=14% Similarity=0.203 Sum_probs=109.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++...+.+| .+.|++++|+|++.++++++.|+ +|++||+++.+++....+. .+|+++.|+|+.
T Consensus 200 ~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg--------~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~ 268 (340)
T 4aow_A 200 WNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDG--------QAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 268 (340)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC--------EEEEEETTTTEEEEEEECS--SCEEEEEECSSS
T ss_pred EECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCC--------eEEEEEeccCceeeeecCC--ceEEeeecCCCC
Confidence 466778888888776 78999999999888787877775 9999999999998887665 689999999997
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeec--------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIES--------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~--------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|+|||.+++..+..+.. .|...|++++|+|||.+|++|+.|+.|++|++..
T Consensus 269 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 6667899999999999888777653 2578999999999999999999999999999753
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=157.14 Aligned_cols=133 Identities=16% Similarity=0.213 Sum_probs=103.1
Q ss_pred cchhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|.++++....+. ..+...|++++|+|+++.++++|+.+ |+|+|||+++++++.... .+..+|++|+|+|+
T Consensus 209 wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 209 WDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYH 280 (357)
T ss_dssp CCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-------SCEEEEESSCGGGCEEEC-CCSSCEEEEEECSS
T ss_pred EECCCCceeeeeeeccccccccchhhhhcccceEEEeecc-------cceeEEECCCCcEeEEEe-ccceeEEEEEEcCC
Confidence 3556666666543 23356789999999887766554443 499999999998877653 34589999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+ |++ +.|++|+|||.++|+++..+ + |...|++++|+| |+.+|++|+.|++|++|++|.-|..
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~~~~-~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVFRDL-S-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEEEEC-C-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEeEEC-C-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 5 544 68999999999999988766 4 689999999999 8899999999999999999986655
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-18 Score=149.51 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=108.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|..+.++..+ ...|..++|+|++..+++++.|+ +|++||+++++++.... +|..+|++|+|+|++
T Consensus 40 Wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s~d~--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 40 WNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTK 109 (304)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCceeEEeecc-CCcEEEEEEeCCCCEEEEECCCC--------EEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCC
Confidence 456678888888876 68899999999888888887775 99999999998877652 344899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +++.|++|+|||.+++. +...+.+ |...|++++|+| ++.+|++|+.|++|++|++..
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEEEEEECC-CCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred CEEEEECCCCeEEEEECCCCcchhhhhcc-cCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 4 45689999999999884 4566777 699999999999 678999999999999999865
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=155.12 Aligned_cols=129 Identities=9% Similarity=0.135 Sum_probs=100.2
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|.+++++...+.. .+...+++++|+|+++.++++|+.+ |+|+|||+++++++.... +|..+|++|+|+|+
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~ 268 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPH 268 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC--CCEEEE-CCSSCEEEEEECSS
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-------CcEEEEECCCCcEEEEEc-CCCCCEEEEEEccC
Confidence 35677888777642 2245688999999887766554443 499999999999887753 34489999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
+ |++ +.|++|+|||.++++++ .+.+ |...|++++|+|++. +|++|+.|++|++|.+|.
T Consensus 269 g~~~lasgs~D~~i~vwd~~~~~~~-~~~~-H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 269 SVPFLASLSEDCSLAVLDSSLSELF-RSQA-HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSCCEEEEETTSCEEEECTTCCEEE-EECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCeEEEEEeCCCeEEEEECCCCcEE-EEcC-CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 6 544 68999999999999866 4566 699999999999985 677999999999999976
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=153.63 Aligned_cols=129 Identities=9% Similarity=0.090 Sum_probs=108.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++|+|+|++
T Consensus 169 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 169 WDIETGQQTTTFTGH-TGDVMSLSLAPDTRLFVSGACDA--------SAKLWDVREGMCRQTFT-GHESDINAICFFPNG 238 (340)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCSEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEcCC-CCceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCC
Confidence 456788888888876 78999999999877777777774 99999999998877653 344899999999997
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|+|||.++++.+.++.. ++...|++++|+|+|.+|++|+.|++|++|++..
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 4456899999999999998888764 1235799999999999999999999999999765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=155.77 Aligned_cols=135 Identities=9% Similarity=0.064 Sum_probs=105.2
Q ss_pred cchhcCceeEE-EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E-ecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V-KDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~-~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~-~~h~~~~pI~sI~F 81 (248)
++..+|+.+.. ....|...|..++|+|++..+++++.++. ...++++||++...... . ..+++..+|++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 202 ISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG----KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp EETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred EEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc----ceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 44556665543 33444678999999999888888876641 11268999998875422 1 23345589999999
Q ss_pred cCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|++ |+ ++.|++|+|||.++|+++.++..+|..+|++|+|+|||.+|++|+.|++|++|+||.
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9998 44 468999999999999999987433799999999999999999999999999999985
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=155.13 Aligned_cols=128 Identities=7% Similarity=0.191 Sum_probs=111.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+...++.+| .+.|.+++|+|++..+++++.|+ +|+|||+++++++... ++|..+|.+++|+|++
T Consensus 135 wd~~~~~~~~~l~~h-~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~~~~~~~~-~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 135 WDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCSADM--------TIKLWDFQGFECIRTM-HGHDHNVSSVSIMPNG 204 (410)
T ss_dssp EETTTCCCCEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CCCEEETTSSCEEECC-CCCSSCEEEEEECSSS
T ss_pred EECCCCcEEEEEecc-CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCCCceeEEE-cCCCCCEEEEEEeCCC
Confidence 456778888888876 78999999999877777877775 9999999998877664 3445899999999987
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|++||.++|+++.++.+ |...|++++++|+|.+|++|+.|++|++|++..
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 44 56899999999999999999998 689999999999999999999999999999864
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=148.69 Aligned_cols=132 Identities=6% Similarity=0.098 Sum_probs=109.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC--CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~--~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
.+..+++.+..+..+|.+.|.+++++| ++..+++++.|+ +|++||+++++++......+..+|++++|+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg--------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG--------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC--------CEEEEESSSSCEEEEECCCSSCCCCEEEECT
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC--------cEEEEECCCCcEEEEEecCCCCceEEEEECC
Confidence 355677778887766678899999999 877777777774 9999999999987766444456899999999
Q ss_pred Cc--eee-eCCCeEEEEECCCCCEE-EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 84 NY--VLS-MDSSVVKIWSKDNGSLF-TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 84 d~--l~S-sdd~~IKIWD~~tGk~~-~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++ +++ +.|+.|+|||.++++.+ .+++..|..+|++++|+|+|.+|++++++ +|++|++....
T Consensus 181 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~ 246 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDV 246 (343)
T ss_dssp TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSST
T ss_pred CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCC
Confidence 98 554 68999999999999988 78886458999999999999999999966 99999987643
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=151.32 Aligned_cols=125 Identities=10% Similarity=0.176 Sum_probs=103.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC------CCCeeEEEEcC
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY------GLPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI~sI~F~~ 83 (248)
.++.+.++.+| .+.|++++|+|++..+++++.|+ +|+|||+++++++....... ...|++++|+|
T Consensus 238 ~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 238 TSRAVRTYHGH-EGDINSVKFFPDGQRFGTGSDDG--------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI 308 (380)
T ss_dssp TCCCCEEECCC-SSCCCEEEECTTSSEEEEECSSS--------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS
T ss_pred CCcceEEECCc-CCCeEEEEEecCCCeEEEEcCCC--------eEEEEECCCCcEEEEecccccccccccCceEEEEECC
Confidence 45677777776 78999999999887777777764 99999999998877653211 12489999999
Q ss_pred Cc--ee-eeCCCeEEEEECCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY--VL-SMDSSVVKIWSKDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~--l~-Ssdd~~IKIWD~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++ ++.|+.|+|||..+++.+..+ .+ |...|++++|+|||.+|++|+.|++|++|++..
T Consensus 309 ~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 309 SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCEEEEEECCCCEEEEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 98 44 458999999999999998887 44 689999999999999999999999999999763
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-17 Score=146.98 Aligned_cols=122 Identities=11% Similarity=0.224 Sum_probs=101.0
Q ss_pred CceeEEEecCCCCCeeEEEE-----eC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCee
Q psy2083 11 GSLFTCIESGDQTQFNNLCH-----IP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIR 77 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~-----~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~ 77 (248)
..+..++.+| .+.|++++| ++ ++..+++++.|+ +|+|||+..+ .|.... .+|..+|+
T Consensus 11 ~~~~~~l~gH-~~~V~~~~~~~s~~~~~d~~~l~sgs~D~--------~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V~ 80 (343)
T 2xzm_R 11 VVKRGILEGH-SDWVTSIVAGFSQKENEDSPVLISGSRDK--------TVMIWKLYEEEQNGYFGIPHKAL-TGHNHFVS 80 (343)
T ss_dssp EEEEEEEECC-SSCEEEEEECCCSSTTCCCCEEEEEETTS--------CEEEEEECSSCCSSBSEEEEEEE-CCCSSCEE
T ss_pred eeeeeeeccc-hhhhhheeeEEEeecCCCCCEEEEEcCCC--------EEEEEECCcCCcccccccccchh-ccCCCceE
Confidence 4466677776 789999999 66 555677777764 9999999864 333333 34458999
Q ss_pred EEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 78 DIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 78 sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|+|+|++ ++ ++.|++|+|||.++|+.+.++.+ |..+|++++|+|++.+|++|+.|++|++|++.
T Consensus 81 ~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 81 DLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 99999987 44 56899999999999999999998 69999999999999999999999999999974
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=148.04 Aligned_cols=125 Identities=10% Similarity=0.205 Sum_probs=103.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--EecCCCCCCeeEEEEcCCc--e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~~~h~~~~pI~sI~F~~d~--l 86 (248)
..++.++.+|..+.|..++|+|++.++++++.|+ +|+|||+.++.... ....+|..+|++|+|+|++ +
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 76 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL 76 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE
Confidence 4577788877444899999999988888888875 99999999886432 2334566899999999997 4
Q ss_pred e-eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 L-SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++.|++|+|||..+++ ++.++++ |..+|++++|+|++.+|++|+.|++|++|++..
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 4 4689999999998774 5778888 699999999999999999999999999999864
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-17 Score=141.76 Aligned_cols=127 Identities=11% Similarity=0.203 Sum_probs=109.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
+..+|+....+.+| ...|..++|+|++..+++++.|+ +|++||+++++++.... .|..+|.++.|+|++
T Consensus 51 ~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 120 (312)
T 4ery_A 51 GAYDGKFEKTISGH-KLGISDVAWSSDSNLLVSASDDK--------TLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSN 120 (312)
T ss_dssp ETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSS
T ss_pred eCCCcccchhhccC-CCceEEEEEcCCCCEEEEECCCC--------EEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC
Confidence 45567888888776 68999999999887787877775 99999999998876642 334899999999987
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|++||.++++.+..+.. |..+|++++|+|++.+|++|+.|+.|++|++..
T Consensus 121 ~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 121 LIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 44 56899999999999999999998 689999999999999999999999999999865
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=146.43 Aligned_cols=122 Identities=13% Similarity=0.215 Sum_probs=101.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCC-----ceeEEecCCCCCCeeEEEEcCC
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRAD-----KPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~~~~h~~~~pI~sI~F~~d 84 (248)
..+..++.+| .+.|++++|+|+++ ++++++.|+ +|++||+... .|+... .+|..+|++++|+|+
T Consensus 7 ~~l~~~l~gH-~~~V~~l~~~~~~~~~l~s~s~D~--------~v~~W~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~d 76 (319)
T 3frx_A 7 LVLRGTLEGH-NGWVTSLATSAGQPNLLLSASRDK--------TLISWKLTGDDQKFGVPVRSF-KGHSHIVQDCTLTAD 76 (319)
T ss_dssp EEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTS--------EEEEEEEEEETTEEEEEEEEE-ECCSSCEEEEEECTT
T ss_pred EEEEEEEccc-cceEEEEEccCCCccEEEEecCCc--------cEEEecCCCCCccccccceEE-eCCcccEEEEEECCC
Confidence 4456677776 79999999999764 466666664 9999999753 344443 234589999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ ++ ++.|++|||||.++|+++..+.+ |..+|++++|+|++.+|++|+.|++|++|++.
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 7 44 56899999999999999999998 69999999999999999999999999999975
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=158.57 Aligned_cols=129 Identities=11% Similarity=0.157 Sum_probs=107.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC------CCCCCeeEEE
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH------MYGLPIRDIK 80 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h------~~~~pI~sI~ 80 (248)
|..++++..++.+| .+.|++++|+|++.++++++.|+ +|+|||+++++++..... +|..+|.+|+
T Consensus 176 d~~~~~~~~~l~~H-~~~V~~v~fspdg~~las~s~D~--------~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~ 246 (611)
T 1nr0_A 176 EGPPFKFKSTFGEH-TKFVHSVRYNPDGSLFASTGGDG--------TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 246 (611)
T ss_dssp ETTTBEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred ECCCCeEeeeeccc-cCceEEEEECCCCCEEEEEECCC--------cEEEEECCCCcEeeeeccccccccccCCCEEEEE
Confidence 34566777888776 78999999999888788887775 999999999988776522 4558999999
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEee------------------------------------------cCCCCC
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIE------------------------------------------SGDQTQ 115 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie------------------------------------------~~h~~~ 115 (248)
|+|++ ++ ++.|++|||||.++++++.++. .+|...
T Consensus 247 ~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 247 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence 99997 44 4689999999999987765542 126889
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 116 FNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 116 In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++++|+|||.+|++|+.|++|++|++..
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999864
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=151.29 Aligned_cols=126 Identities=10% Similarity=0.174 Sum_probs=104.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCC--------------------CcEEEeecCceeeeecCCeeEEEEcCCCcee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPES--------------------GMMFIANENKKILTYYIPAFYLYDIRADKPL 65 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~--------------------g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl 65 (248)
.|..++++...+.+| ...|.+++|+|++ .++++++.| |+|++||+++++++
T Consensus 261 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D--------~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 261 WVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD--------KTIKMWDVSTGMCL 331 (410)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT--------SEEEEEETTTTEEE
T ss_pred EECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC--------CeEEEEECCCCceE
Confidence 355677788888776 6889999999863 235555555 49999999999887
Q ss_pred EEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 66 RVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 66 ~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.... +|..+|++|.|+|++ ++ +++|++|+|||..+++++.++.+ |...|++++|+|++.+|++|+.|++|++|++
T Consensus 332 ~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 332 MTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 7652 344899999999997 44 56899999999999999999998 6999999999999999999999999999974
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-17 Score=143.48 Aligned_cols=127 Identities=11% Similarity=0.215 Sum_probs=107.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d- 84 (248)
.|..+|+++..+.+| .+.|.+++|+|++.++++++.|+ +|++||++.........| ..+|.++.|+|.
T Consensus 92 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~~~~~~~~~~h--~~~v~~~~~~~~~ 160 (319)
T 3frx_A 92 WDVATGETYQRFVGH-KSDVMSVDIDKKASMIISGSRDK--------TIKVWTIKGQCLATLLGH--NDWVSQVRVVPNE 160 (319)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECTTSCEEEEEETTS--------CEEEEETTSCEEEEECCC--SSCEEEEEECCC-
T ss_pred EECCCCCeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCeEEEEecc--CCcEEEEEEccCC
Confidence 466788899988876 78999999999888788887775 999999986433333344 489999999984
Q ss_pred -----c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 -----Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 -----~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
. +.++.|++|++||.++++....+.+ |..+|++++|+|+|.+|++|+.|++|++|++..
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 2 4456899999999999999999988 699999999999999999999999999999865
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-17 Score=147.14 Aligned_cols=129 Identities=7% Similarity=0.207 Sum_probs=107.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-C
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD-N 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~-d 84 (248)
.|..+++++..+.+| ...|.+++|+|++..+++++.|+ +|++||++++++.....+. ..|.+++|+| +
T Consensus 150 wd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~--------~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~ 218 (393)
T 1erj_A 150 WDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDR--------TVRIWDLRTGQCSLTLSIE--DGVTTVAVSPGD 218 (393)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEECSTT
T ss_pred EECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCCC--------cEEEEECCCCeeEEEEEcC--CCcEEEEEECCC
Confidence 356678888888776 78999999999888888887775 9999999999887776655 6899999999 5
Q ss_pred c--e-eeeCCCeEEEEECCCCCEEEEee------cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y--V-LSMDSSVVKIWSKDNGSLFTCIE------SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~--l-~Ssdd~~IKIWD~~tGk~~~tie------~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ + +++.|++|+|||.++|+.+..+. .+|...|++++|+|+|.+|++|+.|++|++|++...
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 5 4 45689999999999999888873 126889999999999999999999999999998653
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=138.76 Aligned_cols=129 Identities=12% Similarity=0.245 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++++..+.+| .+.|..++|+|++..+++++.|+ +|++||+++++++.... .|..+|.++.|+|++
T Consensus 92 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 92 WDVSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDG 161 (312)
T ss_dssp EETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCEEEEEec-CCCCcEEEEEEcCCC
Confidence 466778888888876 68899999999887787777775 99999999998877653 234899999999987
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.+..+..++..+++.++|+|++.+|++++.|+.|++|++..
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 44568999999999999999888654467899999999999999999999999999865
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=149.03 Aligned_cols=164 Identities=13% Similarity=0.128 Sum_probs=124.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
.|..+|+++..+.+| .+.|++++|+|++.. +++++.|+ +|+|||+++++++... .+.+..+|++|+|+|
T Consensus 166 wd~~~~~~~~~~~~h-~~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp 236 (357)
T 4g56_B 166 WDLSQKAVLKSYNAH-SSEVNCVAACPGKDTIFLSCGEDG--------RILLWDTRKPKPATRIDFCASDTIPTSVTWHP 236 (357)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTCSSCEEEEETTS--------CEEECCTTSSSCBCBCCCTTCCSCEEEEEECT
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEccCCCceeeeeccCC--------ceEEEECCCCceeeeeeeccccccccchhhhh
Confidence 467788999998876 789999999998754 55666664 9999999999887653 345567899999999
Q ss_pred Cc---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 84 NY---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 84 d~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
+. +++ +.|+.|+|||.++++++.++.+ |..+|++++|+|++ .+|++|++|++|++|++.. |. +
T Consensus 237 ~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~----------~ 304 (357)
T 4g56_B 237 EKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SE----------V 304 (357)
T ss_dssp TSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CE----------E
T ss_pred cccceEEEeecccceeEEECCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-Cc----------E
Confidence 75 444 5799999999999999999998 68999999999988 5789999999999999754 11 1
Q ss_pred hhhhhcc-ccccc----cCCceeecHhHHhhcCCccc
Q psy2083 159 TEELEEN-IIENV----YDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 159 tee~e~~-~~~~~----yd~y~fvt~~~l~~l~~~~l 190 (248)
...+++. ....+ .|+..|+|-.+...+.+|++
T Consensus 305 ~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 305 FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 1122222 12222 35667888777777776664
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=141.70 Aligned_cols=123 Identities=13% Similarity=0.224 Sum_probs=95.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCC-CCCCeeEEEEcCCc-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHM-YGLPIRDIKFHDNY- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~-~~~pI~sI~F~~d~- 85 (248)
+.+++.++.+| .+.|.++.|+|+ ++++++.|+ +|+|||++.+. .+...... |..+|++|+|+|++
T Consensus 3 ~~~~~~~~~~h-~~~v~~~~~s~~--~las~~~D~--------~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 71 (330)
T 2hes_X 3 SINLIKSLKLY-KEKIWSFDFSQG--ILATGSTDR--------KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS 71 (330)
T ss_dssp CCEEEEEEECC-SSCEEEEEEETT--EEEEEESSS--------CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS
T ss_pred ccccceeeccC-CCceeeeccCCC--EEEEEcCCC--------EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC
Confidence 45678888876 799999999986 677777664 99999999863 34444222 66899999999997
Q ss_pred -ee-eeCCCeEEEEECCC-------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDN-------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~t-------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|+|||.++ ++++..+.+ |..+|++++|+|+|.+|++|+.|++|++|++..
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 44 46899999999853 456777887 699999999999999999999999999999854
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=143.32 Aligned_cols=120 Identities=9% Similarity=0.156 Sum_probs=101.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC--c--ee-e
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN--Y--VL-S 88 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d--~--l~-S 88 (248)
...+..| .+.|..++|+|++..+++++.|+ +|+|||+++++++.... +|..+|.++.|+|+ + ++ +
T Consensus 147 ~~~~~~h-~~~v~~~~~~~~~~~l~t~s~D~--------~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 147 KKSVAMH-TNYLSACSFTNSDMQILTASGDG--------TCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CEEEEEC-SSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEE
T ss_pred ceeeecc-CCcEEEEEEeCCCCEEEEEeCCC--------cEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEE
Confidence 3444444 68899999999887788888775 99999999999887652 34489999999874 3 44 5
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|++|++||.++|+++.++++ |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 6899999999999999999998 699999999999999999999999999999865
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=9.5e-17 Score=148.13 Aligned_cols=135 Identities=10% Similarity=0.102 Sum_probs=96.6
Q ss_pred chhcCceeEEEecCC--CCCeeEEEEeCCCCcEEEeecCc----eeeeecCCeeEEEEcCCCceeEEe----cCCCCCCe
Q psy2083 7 RQDKGSLFTCIESGD--QTQFNNLCHIPESGMMFIANENK----KILTYYIPAFYLYDIRADKPLRVK----DHMYGLPI 76 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~--~~~V~~~~~~~~~g~l~~ag~d~----~~~~~~~G~V~LwDlRs~~pl~~~----~h~~~~pI 76 (248)
|..+|+++.++.+|| ...|..++|+|++..+++++.+. -++|+.|++|++||..+++.+.+. ..+|...+
T Consensus 209 Dl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 209 NLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp ETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred ECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 667899999998654 34677778999765555544322 146777889999999999877654 23433445
Q ss_pred eEEEEcCCceee-eCCCeEEEEECCCCCEEEEeecCCCCCe-eEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNYVLS-MDSSVVKIWSKDNGSLFTCIESGDQTQF-NNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~I-n~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+..++...+++ +.|++|||||..+|+++.++++ |...+ .+++|+|||.+|++|+.|++|++|++
T Consensus 289 lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 555555333444 5799999999999999999998 45554 46899999999999999999999985
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-17 Score=144.40 Aligned_cols=121 Identities=10% Similarity=0.184 Sum_probs=92.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCC--c--ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDN--Y--VL 87 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d--~--l~ 87 (248)
++.+..+|.+.|++++|+|++.++++++.|+ +|+|||+++++. +... .+|..+|++|+|+++ + ++
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~--------~v~lwd~~~~~~~~~~~l-~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDR--------SVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTT--------EEEEEEEETTEEEEEEEE-ECCSSCEEEEEECCGGGSSCEE
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCC--------eEEEEEecCCCcEEEEEE-cCCCccEEEEEeCCCCCCCEEE
Confidence 4444444589999999999888888887775 999999998753 3332 244589999999753 3 44
Q ss_pred -eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++|+|||.++|+ ...++.+ |...|++++|+|+ +.+|++|+.|++|++|++..
T Consensus 76 s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 4689999999999884 5667777 6899999999998 78999999999999999864
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-17 Score=143.37 Aligned_cols=122 Identities=8% Similarity=0.243 Sum_probs=99.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--EecCCCCCCeeEEEEcCCc--ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--VKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+++.++.+| .+.|.+++|+|++..+++++.|+ +|++||++++.+.. .....|..+|++++|+|++ ++
T Consensus 96 ~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 96 ECVTTLEGH-ENEVKSVAWAPSGNLLATCSRDK--------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEEEccCC-CCCceEEEEeCCCCEEEEEECCC--------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 456677765 78999999999887788877775 99999999874322 2223455899999999997 44
Q ss_pred -eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 88 -SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|++|+|||.++++ +..++.+ |...|++++|+|+|.+|++|+.|++|++|++.
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 4689999999999876 4467787 69999999999999999999999999999863
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=144.78 Aligned_cols=126 Identities=11% Similarity=0.169 Sum_probs=103.4
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEe-ecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~a-g~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss 89 (248)
+.....+ .+.|..++|.|.++.+++. ++. .||+|++||+++++++....+. ..|.++.|++++ + +++
T Consensus 269 ~~~~~~~-~~~V~~~~~~p~~~~~la~~~gs------~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 269 LQTFTQH-QGAVKAVAWCPWQSNVLATGGGT------SDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SEEECCC-SSCEEEEEECTTCTTEEEEEECT------TTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred eeeeccc-CCceeeeeeCCCcccEEEEEeec------CCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEE
Confidence 3444444 6889999999987776543 322 3469999999999988877655 689999999987 3 333
Q ss_pred --CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 90 --DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 90 --dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
.|+.|+|||..+++++.++.+ |...|++++|+|||.+|++|+.|++|++|++..+.|+.
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred ecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 689999999999999999998 79999999999999999999999999999998766653
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=144.49 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=119.5
Q ss_pred cchhcCceeEEEe----cCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEE
Q psy2083 6 LRQDKGSLFTCIE----SGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDI 79 (248)
Q Consensus 6 ~~~~~G~~~~~~~----~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI 79 (248)
.|..+|+.+..+. .+|...|.+++++|.++. +++++.| |+|++||+|.. +++... ++|..+|++|
T Consensus 185 wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~~~~~~~-~~h~~~v~~v 255 (380)
T 3iz6_a 185 WDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDLRITSRAVRTY-HGHEGDINSV 255 (380)
T ss_dssp ECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEETTTTCCCCEEE-CCCSSCCCEE
T ss_pred EEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEECCCCCcceEEE-CCcCCCeEEE
Confidence 4566788777763 345788999999885554 5555555 49999999954 555554 3455899999
Q ss_pred EEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 80 KFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 80 ~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
+|+|++ ++ +++|++|+|||.++|+.+..+..+ +...|++++|+|+|.+|++|+.|+.|.+|++..-...
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~-- 333 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV-- 333 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE--
T ss_pred EEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE--
Confidence 999997 44 468999999999999999888652 1124899999999999999999999999997531110
Q ss_pred ccccccchhhhhhcc--c---cccccCCceeecHhHHhhcCCccccC
Q psy2083 151 WCGFLDNLTEELEEN--I---IENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 151 wcs~ld~~tee~e~~--~---~~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
..+..+. ..+ . ...-.|+-.++|-.....+.+|.+-|
T Consensus 334 --~~~~~~~---~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 334 --LNLGTLQ---NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp --EEECCSC---SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred --EEEeccc---CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0111110 111 1 11224566677877777777777654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=141.23 Aligned_cols=123 Identities=8% Similarity=0.165 Sum_probs=97.0
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
++++..+.+| .+.|.+++|+|++.++++++.|+ +|++||++.. +++... .+|..+|++|+|+|++
T Consensus 97 ~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~--------~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 97 MDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDK--------SVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp CEEEEEEC-----CEEEEEECTTSCEEEEEETTS--------CEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSSSS
T ss_pred ceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCCCC
Confidence 4566677765 78999999999887788877775 9999999643 233333 2445899999999997
Q ss_pred -ee-eeCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|||||..++ +++.++.+ |...|++++|+|+ +.+|++|+.|++|++|++..
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDDWECVAVLNG-HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCeeEEEEccC-CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 44 468999999999876 67888888 6999999999998 66899999999999999754
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-16 Score=139.51 Aligned_cols=129 Identities=13% Similarity=0.227 Sum_probs=105.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
.|..+|+++..+.+| .+.|.+++|+|++..+++++.|+ +|+|||++........ ...|..+|.++.|+|+
T Consensus 103 wd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~--------~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAER--------EIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETTS--------CEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCC--------EEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 356788888888876 78999999999888888888775 9999999854433322 2245589999999986
Q ss_pred c------------ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y------------VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~------------l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
. ++ ++.|+.|++||. +++...++.+ |..+|++++|+|||.+|++|+.|++|++|++...
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC-ccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 2 34 468999999994 5777888888 6999999999999999999999999999998543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=138.81 Aligned_cols=119 Identities=12% Similarity=0.194 Sum_probs=96.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c--ee-e
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y--VL-S 88 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~--l~-S 88 (248)
.+.+ |.+.|.+++|+|++..+++++.|+ +|+|||+..+ +++.+. .+|..+|++|+|+++ + ++ +
T Consensus 4 ~~~~-h~~~V~~~~~s~~g~~las~s~D~--------~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 4 IANA-HNEMIHDAVMDYYGKRMATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp ECCS-CSSCEEEEEECTTSSEEEEEETTS--------CEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEE
T ss_pred eccC-CcCceEEEEECCCCCEEEEEeCCC--------EEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEE
Confidence 3444 478999999999888888888775 9999999754 455554 244589999999753 3 44 4
Q ss_pred eCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|++|+|||.++|+ .+..+.. |...|++++|+|+ |.+|++|+.|++|++|++..-
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred cCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 689999999999884 5666776 6899999999998 889999999999999998753
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=148.07 Aligned_cols=120 Identities=16% Similarity=0.349 Sum_probs=102.1
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.+++++..+.+| ...|.+++|+|++.++++++.|+ +|++||. +++++.... +|..+|++|+|+|++ |
T Consensus 455 ~~~~~~~~~~~~-~~~v~~~~~spd~~~las~~~d~--------~i~iw~~-~~~~~~~~~-~h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 455 RNGQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDK--------TVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp TTSCEEEEEECC-SSCEEEEEECTTSCEEEEEETTS--------EEEEEET-TSCEEEEEE-CCSSCEEEEEECTTSSCE
T ss_pred CCCCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCC--------EEEEEcC-CCCEEEEEe-CCCCCEEEEEEcCCCCEE
Confidence 467788887776 78999999999888888877775 9999995 566666542 344899999999998 5
Q ss_pred e-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 L-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++|+.|+|||. +|+++.++.+ |...|++++|+|||.+|++++.|++|++|+
T Consensus 524 ~s~~~dg~v~lwd~-~~~~~~~~~~-h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 524 ASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEETTSEEEEECT-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEECcCEEEEEeC-CCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 4 468999999995 6999999998 799999999999999999999999999996
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=134.89 Aligned_cols=120 Identities=9% Similarity=0.108 Sum_probs=97.7
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEEecCCCCCCeeEEEEcC--Cc--ee-ee
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRVKDHMYGLPIRDIKFHD--NY--VL-SM 89 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~~~h~~~~pI~sI~F~~--d~--l~-Ss 89 (248)
.+|.+.|++++|+|++..+++++.|+ +|++||++++. ++... ..|..+|++|+|+| ++ ++ ++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQ--------HIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCC--------eEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 34589999999999887788877774 99999999863 33322 34458999999998 34 44 56
Q ss_pred CCCeEEEEECCCC---------CEEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 90 DSSVVKIWSKDNG---------SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 90 dd~~IKIWD~~tG---------k~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
.|+.|+|||.+++ +++..+.. |...|++++|+|+ +.+|++++.|+.|++|++......
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHh
Confidence 8999999999987 56778887 6899999999999 999999999999999998765443
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-16 Score=153.00 Aligned_cols=124 Identities=9% Similarity=0.139 Sum_probs=102.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
|..+.++.+| .+.|++++|+|++.. +++++.|+ +|+|||+++++.+.+. .+|..+|++|+|+|++ ++
T Consensus 137 ~~~~~~l~gh-~~~v~~v~f~p~~~~~l~s~s~D~--------~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 137 GTSNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDDN--------TVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp CCBCBCCCCC-SSCEEEEEECSSSSCEEEEEETTS--------CEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSEEE
T ss_pred CCCcceecCC-CCCceEEEECCCCCeEEEEEeCCC--------eEEEEECCCCeEeeee-ccccCceEEEEECCCCCEEE
Confidence 4444455554 789999999998876 66666664 9999999988776664 2445899999999998 44
Q ss_pred -eeCCCeEEEEECCCCCEEEEeec------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIES------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++|+|||..+|+.+..+.. +|...|++++|+|||.+|++|+.|++|++|++..
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 46899999999999999998852 3789999999999999999999999999999865
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-16 Score=143.07 Aligned_cols=131 Identities=9% Similarity=0.156 Sum_probs=102.1
Q ss_pred cchhcCceeEEEe------cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------------eEE
Q psy2083 6 LRQDKGSLFTCIE------SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------------LRV 67 (248)
Q Consensus 6 ~~~~~G~~~~~~~------~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------------l~~ 67 (248)
.|..+|+++..+. .+|.+.|.+++|+|++..+++++.|+ +|++||+++... ...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~--------~v~~wd~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T 1erj_A 234 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR--------SVKLWNLQNANNKSDSKTPNSGTCEVT 305 (393)
T ss_dssp EETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEEC---------------CEEEE
T ss_pred EECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC--------EEEEEECCCCCCcccccCCCCCcceEE
Confidence 3556677666652 34578999999999888788877775 999999987432 222
Q ss_pred ecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC------CCCEEEEEeCCCeEE
Q psy2083 68 KDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP------ESGMMFIANENKKIL 138 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p------dsgll~sa~ed~~I~ 138 (248)
. .+|...|.+++|++++ ++ ++.|+.|+|||.++|+++..+.+ |...|++++|+| ++.+|++|+.|++|+
T Consensus 306 ~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 306 Y-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp E-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred E-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 2 2344899999999987 44 46899999999999999999998 699999999986 688999999999999
Q ss_pred EEEcCCCC
Q psy2083 139 TYYIPSLG 146 (248)
Q Consensus 139 ~w~Ip~lG 146 (248)
+|++..+.
T Consensus 384 iW~~~~~~ 391 (393)
T 1erj_A 384 IWKYKKIA 391 (393)
T ss_dssp EEEEEEC-
T ss_pred ECcccccC
Confidence 99987543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-16 Score=134.03 Aligned_cols=117 Identities=11% Similarity=0.178 Sum_probs=98.2
Q ss_pred CCCeeEEEEeCCCCcEEE-eecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee--CCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFI-ANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM--DSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~-ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss--dd~~IK 95 (248)
.+.|..+.+.|+++.++. ++++ .+++|++||.+.........+. .+|..+.|+++. ++++ .|+.|+
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~------~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGT------SDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECT------TTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred CCceEEEEecCCCCcEEEEEecC------CCCEEEEEecccccccccccce--eeeeeeeecccccceEEEEEcCCCEEE
Confidence 578899999998777553 2222 2469999999998877776655 789999999986 3333 689999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
|||.++|+++.++.+ |..+|++++|+|||.+|++|+.|++|++|++..+-|
T Consensus 268 iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 268 IWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp EEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred EEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 999999999999998 799999999999999999999999999999977654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-16 Score=141.00 Aligned_cols=137 Identities=14% Similarity=0.197 Sum_probs=109.6
Q ss_pred cchhcCceeEEEecCC-----CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGD-----QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~-----~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~s 78 (248)
.|..+++.+..+..++ ...|.+++|+|+++. +++++.++ .+++|++||++++ .++......|..+|++
T Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 193 WDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD-----NDPSILIWDLRNANTPLQTLNQGHQKGILS 267 (416)
T ss_dssp EETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS-----SSCCCCEEETTSTTSCSBCCCSCCSSCEEE
T ss_pred EECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC-----CCceEEEEeCCCCCCCcEEeecCccCceeE
Confidence 4566788888877643 578999999998765 44554442 1238999999997 6666554245589999
Q ss_pred EEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 79 IKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 79 I~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++|+| ++ ++ ++.|+.|+|||.++++++.++.. |...|++++|+|++ .+|++++.|++|++|++....+.
T Consensus 268 ~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99999 65 44 46899999999999999999998 68999999999999 89999999999999999876543
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-16 Score=146.50 Aligned_cols=116 Identities=16% Similarity=0.326 Sum_probs=98.7
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCC
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDS 91 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd 91 (248)
..+++| .+.|++++|+||+.++++++.|+ +|+|||. +++++.+.. +|..+|++|+|+|++ |++ +.|
T Consensus 10 ~~L~GH-~~~V~~~a~spdg~~las~~~d~--------~v~iWd~-~~~~~~~l~-gh~~~V~~l~fspdg~~las~~~d 78 (577)
T 2ymu_A 10 NRLEAH-SSSVRGVAFSPDGQTIASASDDK--------TVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASDD 78 (577)
T ss_dssp EEECCC-SSCEEEEEECTTSSCEEEEETTS--------EEEEECT-TSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEECCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEEEEC-CCCEEEEEe-CCCCCEEEEEECCCCCEEEEEeCC
Confidence 446776 79999999999988888887774 9999995 677776642 345899999999998 554 589
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+|||. +|+++.++.+ |..+|++++|+||+.+|++++.|+.+.+|+..
T Consensus 79 ~~i~vWd~-~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~ 128 (577)
T 2ymu_A 79 KTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 128 (577)
T ss_dssp SCEEEEET-TSCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEEC-CCCEEEEEEC-CCCCEEEEEECCCCCEEEEEcCCCceeecccc
Confidence 99999995 6899999998 69999999999999999999999999999853
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=141.37 Aligned_cols=171 Identities=12% Similarity=0.072 Sum_probs=124.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CCCCC--------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MYGLP-------- 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~~~p-------- 75 (248)
.|..+|+.+..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++..... .+..+
T Consensus 166 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGH-RATVTDIAIIDRGRNVLSASLDG--------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFV 236 (420)
T ss_dssp EETTTCCCCEEEECC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEE
T ss_pred EeCCCCcCceEEcCC-CCcEEEEEEcCCCCEEEEEcCCC--------cEEEeECCCCceeEEeecCCCCCCCccEEEEec
Confidence 466778888888776 78999999999888788877775 899999999988876531 22234
Q ss_pred -------------eeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEE
Q psy2083 76 -------------IRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKIL 138 (248)
Q Consensus 76 -------------I~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~ 138 (248)
|++++|+|++ ++++.|+.|+|||.++++.+..+..+|..+|++++|+|++. +|++|+.|+.|+
T Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~ 316 (420)
T 3vl1_A 237 GTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLA 316 (420)
T ss_dssp CCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEE
Confidence 4445556776 44568999999999999988888765688999999999998 999999999999
Q ss_pred EEEcCCCCCCCCccccccchhhhhhcccc--ccccCCceeecHhHHhhcCCccccC
Q psy2083 139 TYYIPSLGPAPKWCGFLDNLTEELEENII--ENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 139 ~w~Ip~lG~aP~wcs~ld~~tee~e~~~~--~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
+|++..... | +..+... ..... -...++-.++|-.+...+.+|.+-.
T Consensus 317 vwd~~~~~~-~-----~~~~~~~-~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 317 QWDLRSPEC-P-----VGEFLIN-EGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEETTCTTS-C-----SEEEEES-TTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred EEEcCCCcC-c-----hhhhhcc-CCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 999876321 1 1111100 00011 1223555777877777777777544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-16 Score=133.12 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=110.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee----------------------------------eeecCCeeEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI----------------------------------LTYYIPAFYL 56 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~----------------------------------~~~~~G~V~L 56 (248)
+.+..++.+| .+.|.+++|+|++..+++++.|+.+ .++.||.+++
T Consensus 76 ~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 76 GIPQRALRGH-SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred ceeeEEEeCC-CCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 3355566665 7899999999988888888776532 5678899999
Q ss_pred EEcCCCceeEEecCCCCCCeeEEEEcCCc-----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 57 YDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 57 wDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
||++...+.......|..+|..++|+++. +.++.|++|++||.++++++..+.+ |..+|++++|+|++.+|++|
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEE
Confidence 99998876666555666899999999874 3456899999999999999999998 69999999999999999999
Q ss_pred eCCCeEEEEEcCC
Q psy2083 132 NENKKILTYYIPS 144 (248)
Q Consensus 132 ~ed~~I~~w~Ip~ 144 (248)
+.|++|++|++..
T Consensus 234 s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 234 GKDGQAMLWDLNE 246 (340)
T ss_dssp ETTCEEEEEETTT
T ss_pred eCCCeEEEEEecc
Confidence 9999999999875
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-16 Score=151.66 Aligned_cols=129 Identities=9% Similarity=0.153 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~ 83 (248)
.|..+|++...+.+| .+.|.+++|+|++..+++++.|+ +|+|||++........ ..+|...|++++|+|
T Consensus 457 wd~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGH-TKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCEEEEECSSTTSCSSCEEEEEECS
T ss_pred EECCCCcceeEEeCC-CCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCCCcceeeccCCCCCCCcEEEEEEeC
Confidence 456678888888876 78999999999988888888875 9999999876544432 235568899999999
Q ss_pred Cc----ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY----VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~----l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+. ++ ++.|++|+|||.+++++..++.+ |...|++++|+|+|.+|++|+.|++|++|++..
T Consensus 528 ~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 74 44 56899999999999999999998 699999999999999999999999999999865
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-15 Score=133.00 Aligned_cols=127 Identities=9% Similarity=0.105 Sum_probs=108.4
Q ss_pred cchhc-CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDK-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~-G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+ ++.+..+..+ .+.|.+++|+|++..+++++.++ .|++||+++++++....+. .++.++.|+|+
T Consensus 202 ~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~ 270 (369)
T 3zwl_B 202 YDVSNNYEYVDSIDLH-EKSISDMQFSPDLTYFITSSRDT--------NSFLVDVSTLQVLKKYETD--CPLNTAVITPL 270 (369)
T ss_dssp EETTTTTEEEEEEECC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECS--SCEEEEEECSS
T ss_pred EECCCCcEeEEEEecC-CCceeEEEECCCCCEEEEecCCc--------eEEEEECCCCceeeeecCC--CCceeEEecCC
Confidence 34555 6677777776 68999999999887777777764 8999999999988877655 89999999999
Q ss_pred c---eeeeCCC--------------eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLSMDSS--------------VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~Ssdd~--------------~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.++ .|++||..+++.+..+.+ |...|++++|+|++.+|++++.|++|++|++..
T Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 271 KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7 4444555 899999999999999998 689999999999999999999999999999764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-16 Score=140.89 Aligned_cols=135 Identities=11% Similarity=0.119 Sum_probs=106.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCe-eEEEEcCCCceeEEecCC-CCCCeeEEEEcCCc--e-ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPA-FYLYDIRADKPLRVKDHM-YGLPIRDIKFHDNY--V-LS 88 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~-V~LwDlRs~~pl~~~~h~-~~~pI~sI~F~~d~--l-~S 88 (248)
+..+.+| .+.|++++|+|++.++++++.|+ + |+|||+++++++.....+ |..+|++++|+|++ + ++
T Consensus 188 ~~~~~~h-~~~v~~~~~s~~g~~l~s~s~d~--------~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 188 GVLIKAH-TNPIKMVRLNRKSDMVATCSQDG--------TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CEEECCC-SSCEEEEEECTTSSEEEEEETTC--------SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred cEEEEcc-CCceEEEEECCCCCEEEEEeCCC--------CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 5667765 79999999999887787877774 8 999999999998877533 55899999999997 4 45
Q ss_pred eCCCeEEEEECCCCCEE--EE--------------------eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 89 MDSSVVKIWSKDNGSLF--TC--------------------IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~--~t--------------------ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++|++|+|||.+++... .. +...+..+...++|+|||+.|++++.|+++..|.+..-+
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 68999999999865311 11 111112234678999999999999999999999998888
Q ss_pred CCCCccccccc
Q psy2083 147 PAPKWCGFLDN 157 (248)
Q Consensus 147 ~aP~wcs~ld~ 157 (248)
...+||-.++.
T Consensus 339 ~~~~~~~~~~~ 349 (355)
T 3vu4_A 339 EMERWLIQMDQ 349 (355)
T ss_dssp TTTEEEEEEEE
T ss_pred CCceEEEeeCc
Confidence 88899977664
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=157.30 Aligned_cols=127 Identities=6% Similarity=0.060 Sum_probs=100.2
Q ss_pred cchhcCc-eeEEEecCCCCCeeEEE-EeCCCC--cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEE
Q psy2083 6 LRQDKGS-LFTCIESGDQTQFNNLC-HIPESG--MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~-~~~~~~~~~~~~V~~~~-~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~ 80 (248)
.|..++. ...++.+| .+.|++++ +++++| +++++|.|+ +|+|||+|+++++.+. .|..+..|.+|+
T Consensus 292 WD~~~~~~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~--------tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 292 FDLTDPEVPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDG--------YFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp EETTBCSSCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTS--------EEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred EECCCCCCceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCC--------eEEEEECCCCCcccccccccccCcccceE
Confidence 3455553 45566665 68999994 455544 456666664 9999999998765443 454334689999
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++ +++|++|||||.+++.++.++.+ |...|++|+|+|+|.+|++|+.|++|++|++
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred eCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 99986 44 46899999999999999889998 6999999999999999999999999999985
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=135.45 Aligned_cols=128 Identities=12% Similarity=0.162 Sum_probs=102.7
Q ss_pred chhcCceeEEEec----CCCCCeeEEEEeCCC----CcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE
Q psy2083 7 RQDKGSLFTCIES----GDQTQFNNLCHIPES----GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD 78 (248)
Q Consensus 7 ~~~~G~~~~~~~~----~~~~~V~~~~~~~~~----g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s 78 (248)
+..+++.+..+.. .|...|.+++|+|++ .++++++.|+ +|++||+++++++.... .|..+|++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg--------~i~v~d~~~~~~~~~~~-~~~~~i~~ 120 (366)
T 3k26_A 50 ECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG--------IIRIINPITMQCIKHYV-GHGNAINE 120 (366)
T ss_dssp EECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC--------EEEEECTTTCCEEEEEE-SCCSCEEE
T ss_pred EcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC--------EEEEEEchhceEeeeec-CCCCcEEE
Confidence 3445555555542 235789999999983 3566666664 99999999998877653 34489999
Q ss_pred EEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEe---ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCI---ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~ti---e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+| ++ ++ ++.|+.|+|||.++++.+..+ .+ |...|++++|+|++.+|++++.|+.|.+|++..
T Consensus 121 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 121 LKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred EEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 99999 65 44 468999999999999999998 55 689999999999999999999999999999864
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.70 E-value=7.6e-16 Score=137.01 Aligned_cols=133 Identities=9% Similarity=0.102 Sum_probs=108.5
Q ss_pred cchhcCceeEEEecC--C---CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC---------
Q psy2083 6 LRQDKGSLFTCIESG--D---QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM--------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~--~---~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~--------- 71 (248)
+|..+++.+..+... | ...|.+++|+|++..+++++.++ ..|.|++||+++++++......
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-----~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-----SFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET-----TEEEEEEEETTTCCEEEEECBC--------C
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC-----CCceEEEEECCCCcccceeccCccccccccc
Confidence 466678888887761 3 47899999999887777777661 0028999999999888775310
Q ss_pred ---CCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEee------cCC---------------CCCeeEEEEeCC
Q psy2083 72 ---YGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIE------SGD---------------QTQFNNLCHIPE 124 (248)
Q Consensus 72 ---~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie------~~h---------------~~~In~l~~~pd 124 (248)
|..+|.+++|+|++ ++ ++.|+.|+|||.++++++.++. . | ..+|++++|+|+
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCceeEEEeccc
Confidence 34899999999987 44 4689999999999999999999 6 5 789999999999
Q ss_pred C----------CEEEEEeCCCeEEEEEcCC
Q psy2083 125 S----------GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 125 s----------gll~sa~ed~~I~~w~Ip~ 144 (248)
+ .+|++|+.|+.|++|++..
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccccceEEEecCCCcEEEEEcCC
Confidence 8 7999999999999999753
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-15 Score=136.84 Aligned_cols=133 Identities=9% Similarity=0.166 Sum_probs=101.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee------------------------------e--eecCCe
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI------------------------------L--TYYIPA 53 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~------------------------------~--~~~~G~ 53 (248)
.|..+|+++..+..+ +.|.++++.++. ++++.++ .+ . |+.+|+
T Consensus 86 Wd~~~~~~~~~~~~~--~~v~~v~~~~~~--~~~~~~~-~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVD--APVKDLFLSREF--IVVSYGD-VISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EETTTTEEEEEEECS--SCEEEEEECSSE--EEEEETT-EEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EECCCCcEEEEEECC--CceEEEEEcCCE--EEEEEcC-EEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 356788888888753 678888887642 2222211 11 0 466789
Q ss_pred eEEEEcCCCc---------------e-eEEecCCCCCCeeEEEEcCCc--ee-eeCCCe-EEEEECCCCCEEEEee-cCC
Q psy2083 54 FYLYDIRADK---------------P-LRVKDHMYGLPIRDIKFHDNY--VL-SMDSSV-VKIWSKDNGSLFTCIE-SGD 112 (248)
Q Consensus 54 V~LwDlRs~~---------------p-l~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~-IKIWD~~tGk~~~tie-~~h 112 (248)
|++||+++++ | +... .+|..+|++|+|+|++ ++ ++.|++ |+|||.++|+++.++. +.|
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp EEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 9999999865 3 3433 2445899999999998 44 468998 9999999999999998 326
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+|++++|+|||.+|++++.|++|++|++..
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 89999999999999999999999999999976
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=140.85 Aligned_cols=131 Identities=8% Similarity=0.052 Sum_probs=99.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d 84 (248)
.|..+|+++.....++...|.+++|+|++.++++++.|+ +|++||+++++++ ......|..+|++|+|+|+
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCTTSCCEECCCCTTSCEEEEEECTT
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCCCCccEEeccCCCCEEEEEEeCC
Confidence 456678887777666566899999999877666666664 9999999999876 4443335589999999999
Q ss_pred c--eeeeCCCeEEEEECCCCCEEEEeec--CCCCCee--EEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 85 Y--VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFN--NLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In--~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ ++++.++.|+|||.++++.+.++++ .|..+++ +++|+|+|.+|++++. |+.|++|++..
T Consensus 226 g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 226 GYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 7 5555455999999999987766553 0234555 5999999999999998 99999998754
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=7.5e-16 Score=134.60 Aligned_cols=120 Identities=12% Similarity=0.290 Sum_probs=94.9
Q ss_pred eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEEcCC---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F~~d--- 84 (248)
.+..+..| ...|++++|+|+ +.++++++.|+ +|++||++++. +.....| ..+|++++|+|+
T Consensus 91 ~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~--------~v~~wd~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 91 QIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDG--------KVSVVEFKENGTTSPIIIDAH--AIGVNSASWAPATIE 159 (297)
T ss_dssp CCEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEEBCSSSCBCCEEEECC--SSCEEEEEECCCC--
T ss_pred EEEEeecC-CCceeEEEeCcCCCCcEEEEEECCC--------cEEEEEecCCCceeeeeeecc--cCccceEeecCCccc
Confidence 44455554 688999999997 44566666664 99999999863 2233344 489999999986
Q ss_pred ----------c--ee-eeCCCeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCCC---CEEEEEeCCCeEEEEEcCC
Q psy2083 85 ----------Y--VL-SMDSSVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ----------~--l~-Ssdd~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pds---gll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ ++.|++|||||.++++ ...++.+ |...|++++|+|++ .+|++|+.|++|++|++..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 2 44 5689999999999877 6678887 69999999999995 8999999999999999865
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-15 Score=129.89 Aligned_cols=123 Identities=15% Similarity=0.216 Sum_probs=102.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
.++....+...|...|..++++|++. +++++.++ .|++||+++++++.... .|..+|++++|+|++ ++
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 172 NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG--------LIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSCEEE
T ss_pred cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC--------eEEEEECCchhhhhhhh-cCCceEEEEEEecCCCEEE
Confidence 34556666664578999999998765 77776664 99999999999887753 234899999999997 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+.|++||.++++++..+.. |..+|++++|+|++. +++++.|+.|++|++..
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITL-PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEEC-SSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred EecCCEEEEEECCCCceeEEEec-cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 56899999999999999999998 588999999999998 66799999999999864
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-16 Score=132.25 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=98.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCcee------------------------
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPL------------------------ 65 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl------------------------ 65 (248)
+.+..+..| .+.|.+++|+|+ +..+++++.|+ +|++||+++++++
T Consensus 101 ~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (351)
T 3f3f_A 101 NKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGNDG--------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDF 171 (351)
T ss_dssp EEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTC--------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCE
T ss_pred ceeeeeccc-CCceeEEEEcCCCCCcEEEEecCCC--------cEEEecCCChHHhccccccccccccccccCCccccee
Confidence 456666665 689999999998 66677777664 8999999876421
Q ss_pred -----------------------------------EEecCCCCCCeeEEEEcCC-----c-ee-eeCCCeEEEEECCCC-
Q psy2083 66 -----------------------------------RVKDHMYGLPIRDIKFHDN-----Y-VL-SMDSSVVKIWSKDNG- 102 (248)
Q Consensus 66 -----------------------------------~~~~h~~~~pI~sI~F~~d-----~-l~-Ssdd~~IKIWD~~tG- 102 (248)
......|..+|++++|+|+ . ++ ++.|+.|+|||.+++
T Consensus 172 ~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 172 CLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp EEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred EEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 1112245589999999998 4 44 468999999999875
Q ss_pred ---------------------------------------------CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 103 ---------------------------------------------SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 103 ---------------------------------------------k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+..+.+ |...|++++|+|++.+|++|+.|+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 252 SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ---------------------------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCCEEEEecCCCcE
Confidence 56777777 68999999999999999999999999
Q ss_pred EEEEcCC
Q psy2083 138 LTYYIPS 144 (248)
Q Consensus 138 ~~w~Ip~ 144 (248)
++|++..
T Consensus 331 ~iw~~~~ 337 (351)
T 3f3f_A 331 RLWKATY 337 (351)
T ss_dssp EEEEECT
T ss_pred EEEecCc
Confidence 9999875
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.7e-16 Score=150.12 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=105.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++..++.+| .+.|++++|+|++.++++++.|+ +|+|||+++++++....+. .+|.+++|+|++
T Consensus 546 wd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg--------~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~ 614 (694)
T 3dm0_A 546 WNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDG--------VVLLWDLAEGKKLYSLEAN--SVIHALCFSPNR 614 (694)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------BCEEEETTTTEEEECCBCS--SCEEEEEECSSS
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCceEEEecCC--CcEEEEEEcCCC
Confidence 355667788888776 78999999999888787877775 9999999999988776554 689999999998
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecC------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESG------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++++.++.|+|||.++++.+..+..+ +...+++++|+|||.+|++|+.|++|++|++.
T Consensus 615 ~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 615 YWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 66677888999999999988877531 01237899999999999999999999999975
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=138.99 Aligned_cols=118 Identities=8% Similarity=0.197 Sum_probs=98.1
Q ss_pred EEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 16 CIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
.+.+| .+.|.+++|+| ++..+++++.|+ +|+|||+.++ +++.... +|..+|++|+|+|++
T Consensus 76 ~~~~h-~~~V~~~~~~p~~~~~l~s~s~dg--------~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~ 145 (402)
T 2aq5_A 76 LVCGH-TAPVLDIAWCPHNDNVIASGSEDC--------TVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQN 145 (402)
T ss_dssp CBCCC-SSCEEEEEECTTCTTEEEEEETTS--------EEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTT
T ss_pred eEecC-CCCEEEEEeCCCCCCEEEEEeCCC--------eEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCC
Confidence 34444 78999999999 666666766664 9999999997 5655542 344899999999985
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEe--ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCI--ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~ti--e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++.+.++ .. |...|++++|+|++.+|++++.|++|++|++..
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 44 468999999999999999999 66 689999999999999999999999999999865
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-15 Score=134.53 Aligned_cols=133 Identities=13% Similarity=0.210 Sum_probs=102.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCc-eeEEec--------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADK-PLRVKD-------------- 69 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~-------------- 69 (248)
+|..+++.+..+..| .+.|.+++|+|++.. +++++.| |.|++||++++. ++....
T Consensus 171 ~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 171 CDLKSGSCSHILQGH-RQEILAVSWSPRYDYILATASAD--------SRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EESSSSCCCEEECCC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred EeCCCcceeeeecCC-CCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCCCCcccccccccccccceeecccc
Confidence 455678888888776 689999999998886 5565555 499999999875 333321
Q ss_pred CCCCCCeeEEEEcCCc--e-eeeCCCeEEEEECCCC--------------------------------------------
Q psy2083 70 HMYGLPIRDIKFHDNY--V-LSMDSSVVKIWSKDNG-------------------------------------------- 102 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD~~tG-------------------------------------------- 102 (248)
..|..+|++++|+|++ + +++.|+.|++||.+++
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 2455899999999997 4 4467889999997654
Q ss_pred ---CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 103 ---SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 103 ---k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+++..+.+ |..+|++++|+|++.+|++|+.|+.|.+|++....+.
T Consensus 322 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 322 YSGEQITMLKG-HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp TTCCEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cCCcceeeecc-CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 45666676 6899999999999999999999999999998775443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=143.15 Aligned_cols=130 Identities=12% Similarity=0.235 Sum_probs=106.8
Q ss_pred cchhcCceeEEEecC-CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-
Q psy2083 6 LRQDKGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD- 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~-~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~- 83 (248)
.|..+++++..+..+ |.+.|++++|+|++..+++++.|+ +|++||+++++++......+..+|++++|+|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG--------IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS--------CEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 467788999998873 468999999999877777777774 9999999999998876544457999997765
Q ss_pred ---Cc--eee-eCCCeEEEEECCCCCEEEEeecC-------------------------CCCCeeEEEEeCCCCEEEEEe
Q psy2083 84 ---NY--VLS-MDSSVVKIWSKDNGSLFTCIESG-------------------------DQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 84 ---d~--l~S-sdd~~IKIWD~~tGk~~~tie~~-------------------------h~~~In~l~~~pdsgll~sa~ 132 (248)
++ +++ +.|+.|+|||.++|+++.++.++ |...|++++|+ ++.+|++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 44 444 57999999999999999888752 34568899999 779999999
Q ss_pred CCCeEEEEEcCC
Q psy2083 133 ENKKILTYYIPS 144 (248)
Q Consensus 133 ed~~I~~w~Ip~ 144 (248)
.|++|++|++..
T Consensus 348 ~d~~i~~wd~~~ 359 (437)
T 3gre_A 348 ATSSIVMFSLNE 359 (437)
T ss_dssp GGTEEEEEETTC
T ss_pred CCCeEEEEECCC
Confidence 999999999865
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-16 Score=134.19 Aligned_cols=124 Identities=10% Similarity=0.192 Sum_probs=99.0
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCC---CcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~---g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
..+.+..+.+| .+.|++++|+|++ .++++++.|+ +|+|||+++ +..+.....+|..+|++++|+|++
T Consensus 28 ~~~~~~~~~~h-~~~v~~~~~~~~~~~g~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 28 PMKDIEVTSSP-DDSIGCLSFSPPTLPGNFLIAGSWAN--------DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp TTCCEECSSCC-SSCEEEEEECCTTSSSEEEEEEETTS--------EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS
T ss_pred CcceeEeccCC-CCceEEEEEcCCCCCceEEEEECCCC--------cEEEEEcCCCCceeEEEeccccCCEEEEEECcCC
Confidence 34566666665 7999999999985 4566666664 999999998 555533323345899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE--eCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH--IPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~--~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++.+... . |..+|++++| +|++.+|++++.|+.|.+|++..
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQIA-Q-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEE-E-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred CEEEEEcCCCcEEEEEcCCCCceeec-c-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 44 467999999999999887754 4 4899999999 89999999999999999999875
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-15 Score=130.88 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=107.7
Q ss_pred cchhcCceeEE--EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTC--IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~--~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
-....|..... +.+| .+.|++++|+|++..+++++.|+ .|++||+.+++++.... .|..+|.+++|+|
T Consensus 15 ~~~~~G~~~~~~~l~~h-~~~v~~~~~s~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~ 84 (369)
T 3zwl_B 15 NLYFQGSHMKAIKLTGH-ERPLTQVKYNKEGDLLFSCSKDS--------SASVWYSLNGERLGTLD-GHTGTIWSIDVDC 84 (369)
T ss_dssp CCCSSCCSEEEEEEECC-SSCEEEEEECTTSCEEEEEESSS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECT
T ss_pred ceEEeccccccEEEEEe-eceEEEEEEcCCCCEEEEEeCCC--------EEEEEeCCCchhhhhhh-hcCCcEEEEEEcC
Confidence 34446665555 4555 79999999999888788877774 89999999998887753 3348999999999
Q ss_pred Cc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCC
Q psy2083 84 NY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-----KKILTYYIPSLG 146 (248)
Q Consensus 84 d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-----~~I~~w~Ip~lG 146 (248)
++ + +++.|+.|++||.++++.+..+.. ..+|++++|+|++.+|++++.+ +.|.+|++..-.
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKS--PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeec--CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 87 4 456899999999999999999985 8999999999999999999999 999999987644
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-16 Score=140.62 Aligned_cols=129 Identities=12% Similarity=0.139 Sum_probs=103.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++...+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++++|+|++
T Consensus 124 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d~--------~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 124 LDSNFNLQREIDQAH-VSEITKLKFFPSGEALISSSQDM--------QLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRG 193 (420)
T ss_dssp ECTTSCEEEEETTSS-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCCCEEEE-CCSSCEEEEEEETTT
T ss_pred EeCCCcceeeecccc-cCccEEEEECCCCCEEEEEeCCC--------eEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCC
Confidence 355667777766555 78999999999887787877775 99999999998776652 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC--CCCC---------------------eeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG--DQTQ---------------------FNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~--h~~~---------------------In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
++ ++.|++|++||.++++.+..+..+ +... +++++|+|++.+|++|+.|+.|.+
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 44 468999999999999999998741 2334 444555789999999999999999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|++..
T Consensus 274 ~d~~~ 278 (420)
T 3vl1_A 274 HNVFS 278 (420)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99865
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.7e-15 Score=129.39 Aligned_cols=126 Identities=10% Similarity=0.128 Sum_probs=107.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++.+..+..| .+.|..++++|++..+++++.++ .|++||+++++++....+. .+|.+++|+|++
T Consensus 168 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~ 236 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGH-TDGASCIDISNDGTKLWTGGLDN--------TVRSWDLREGRQLQQHDFT--SQIFSLGYCPTG 236 (337)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEECTTS
T ss_pred EeCCCCceeeeeecc-cCceEEEEECCCCCEEEEEecCC--------cEEEEECCCCceEeeecCC--CceEEEEECCCC
Confidence 566778888888775 68899999999887787777764 8999999999988877665 789999999997
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.++.|++||.++++.. .+.. |..+|++++|+|++.+|++++.|+.|++|+++.
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDKY-QLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCEE-EECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCCCeE-EEcC-CccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 44567999999999988765 4555 589999999999999999999999999999875
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.7e-16 Score=135.79 Aligned_cols=124 Identities=11% Similarity=0.199 Sum_probs=99.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~- 85 (248)
|+++..+.+| .+.|.+++|+|++..+++++.|+ +|+|||+..+ +++... ..|..+|++++|+++ +
T Consensus 1 G~~~~~~~~h-~~~v~~~~~s~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 1 GSMVVIANAH-NELIHDAVLDYYGKRLATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp ----CCEEEC-CCCEEEEEECSSSSEEEEEETTS--------CEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCS
T ss_pred CCccEEecCC-cccEEEEEEcCCCCEEEEEECCC--------cEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCC
Confidence 5666777776 79999999999888787777774 8999999854 444443 234589999999866 4
Q ss_pred -ee-eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
++ ++.|+.|+|||.++++ .+..+.. |...|++++|+|+ +.+|++++.|+.|.+|++...
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 44 4679999999999987 6777776 6899999999999 999999999999999998765
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-15 Score=134.54 Aligned_cols=128 Identities=8% Similarity=0.043 Sum_probs=109.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++.+..+..+ ...|..++|+|++..+++++.++ .|++||+++++++.... .+..+|.++.|+|++
T Consensus 232 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 232 YQITEKTPTGKLIGH-HGPISVLEFNDTNKLLLSASDDG--------TLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD 301 (425)
T ss_dssp EETTCSSCSEEECCC-SSCEEEEEEETTTTEEEEEETTS--------CEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT
T ss_pred EEcCCCceeeeeccC-CCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCccceEec-CCCccEEEEEECCCC
Confidence 455667777787765 68999999999887777777664 89999999998877653 234899999999997
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.+..+.. |..+|++++|+|++.+|++++.|+.|.+|++..
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred EEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 5556899999999999999999998 589999999999999999999999999999865
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=139.72 Aligned_cols=176 Identities=9% Similarity=0.097 Sum_probs=113.2
Q ss_pred chhcC--ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEE
Q psy2083 7 RQDKG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 7 ~~~~G--~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F 81 (248)
|..++ +++.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++ +.... ..|..+|++++|
T Consensus 39 ~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~ 108 (377)
T 3dwl_C 39 EQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRPDGTWKQTLVL-LRLNRAATFVRW 108 (377)
T ss_dssp EEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETTS--------SEEEC------CCCCEEEC-CCCSSCEEEEEC
T ss_pred EccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCCCCceeeeeEe-cccCCceEEEEE
Confidence 34445 566666665 78999999999888888887775 99999999987 44443 234589999999
Q ss_pred cCCc---eeeeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC-----CC
Q psy2083 82 HDNY---VLSMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA-----PK 150 (248)
Q Consensus 82 ~~d~---l~Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a-----P~ 150 (248)
+|++ ++++.|+.|++||.++++ ....+...|...|++++|+|++.+|++++.|++|++|++...... ..
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 188 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASV 188 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCS
T ss_pred CCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccc
Confidence 9987 445689999999999987 367777535899999999999999999999999999998432111 11
Q ss_pred cccc--ccchhhhhhcc-cc---ccccCCceeecHhHHhhcCCccccC
Q psy2083 151 WCGF--LDNLTEELEEN-II---ENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 151 wcs~--ld~~tee~e~~-~~---~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
|... ...+..++.+. .. ..-.|+-.+++-.+...+.++++-.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 189 WGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred cccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 2211 12222223111 11 1123555677766666777766543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.2e-16 Score=136.19 Aligned_cols=126 Identities=12% Similarity=0.183 Sum_probs=106.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+++++..+..+ ...|..++|+|++ .+++++.++ .|++||+++++++.... .+..+|.+++|+|++
T Consensus 274 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-~l~~~~~d~--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGH-SQSIVSASWVGDD-KVISCSMDG--------SVRLWSLKQNTLLALSI-VDGVPIFAGRISQDG 342 (425)
T ss_dssp ECSSSBSCSEEECCC-SSCEEEEEEETTT-EEEEEETTS--------EEEEEETTTTEEEEEEE-CTTCCEEEEEECTTS
T ss_pred EECCCCccceEecCC-CccEEEEEECCCC-EEEEEeCCC--------cEEEEECCCCcEeEecc-cCCccEEEEEEcCCC
Confidence 455677788888765 6899999999977 677776664 99999999998877653 234799999999997
Q ss_pred ---eeeeCCCeEEEEECCCCC--------------------EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 86 ---VLSMDSSVVKIWSKDNGS--------------------LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk--------------------~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
++++.|+.|+|||.++++ ++..+.. |.. .|++++|+|++.+|++++.|+.|.+|
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-SQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC-TTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC-cccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 445679999999999988 8999988 455 99999999999999999999999999
Q ss_pred EcC
Q psy2083 141 YIP 143 (248)
Q Consensus 141 ~Ip 143 (248)
+++
T Consensus 422 ~~~ 424 (425)
T 1r5m_A 422 AIP 424 (425)
T ss_dssp ECC
T ss_pred eec
Confidence 986
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-15 Score=128.44 Aligned_cols=123 Identities=11% Similarity=0.120 Sum_probs=103.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+++.+..+.. ...+..++|+|++..+++++.++ .|++||+++++......|. .+|.+++|+|++
T Consensus 210 ~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~--------~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~ 277 (337)
T 1gxr_A 210 WDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESS--------NVEVLHVNKPDKYQLHLHE--SCVLSLKFAYCG 277 (337)
T ss_dssp EETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTSSCEEEECCCS--SCEEEEEECTTS
T ss_pred EECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCCeEEEcCCc--cceeEEEECCCC
Confidence 56677888888765 47899999999887777776664 8999999998876655554 899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+ +++.|+.|++||.++++.+..... ..+|++++|+|++.+|++++.|+.|.+|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEEecC--CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 4 456899999999999998866554 789999999999999999999999999986
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.2e-16 Score=144.70 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=99.9
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC----------Cc
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD----------NY 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~----------d~ 85 (248)
.+..| ...|.+++|+|++.++++++.|+ .|++||+++++++......|..+|++++|+| ++
T Consensus 483 ~~~~~-~~~v~~~~~s~~g~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~ 553 (615)
T 1pgu_A 483 LKTPL-RAKPSYISISPSETYIAAGDVMG--------KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 553 (615)
T ss_dssp CSSCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC
T ss_pred ccCCc-cCceEEEEECCCCCEEEEcCCCC--------eEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC
Confidence 33444 78999999999888888887775 8999999999888765422458999999999 76
Q ss_pred --ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ ++.|+.|+|||.+++ +++..+.+ |...|++++|+||+. |++++.|+.|++|++.
T Consensus 554 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 554 DLVATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred CEEEEEcCCCcEEEEECCCCceechhhhc-CccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 44 457999999999998 78888888 699999999999999 9999999999999975
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-15 Score=134.22 Aligned_cols=129 Identities=10% Similarity=0.132 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+....+..+|.+.|.+++|+|++..+++++.++ .|++||+.+++++.... .|..+|.++.|+++.
T Consensus 118 w~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--------~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 188 (401)
T 4aez_A 118 WNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--------LVDIYDVESQTKLRTMA-GHQARVGCLSWNRHV 188 (401)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEEETTE
T ss_pred eeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--------eEEEEECcCCeEEEEec-CCCCceEEEEECCCE
Confidence 456778888888876678999999999877777777664 99999999998877653 445899999998777
Q ss_pred -eeeeCCCeEEEEECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.+ .+..+..+.+ |...|++++|+|++.+|++|+.|+.|++|++..
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 555689999999999 5677888888 699999999999999999999999999999875
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=133.44 Aligned_cols=129 Identities=9% Similarity=0.129 Sum_probs=100.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC---CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec----CCCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP---ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----HMYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~---~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----h~~~~pI~s 78 (248)
+|..++++...... ...|.+++|+| ++..+++++.++ .|++||+++++++.... ..|..+|++
T Consensus 195 ~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 264 (357)
T 3i2n_A 195 FDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEG--------KFHVFDMRTQHPTKGFASVSEKAHKSTVWQ 264 (357)
T ss_dssp EETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTT--------EEEEEEEEEEETTTEEEEEEEECCSSCEEE
T ss_pred EECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCC--------eEEEEeCcCCCcccceeeeccCCCcCCEEE
Confidence 35556666544333 57899999999 777777777664 89999999986654321 234589999
Q ss_pred EEEcCCc---e-eeeCCCeEEEEECCCC-------------------CEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCC
Q psy2083 79 IKFHDNY---V-LSMDSSVVKIWSKDNG-------------------SLFTCIESGDQTQFNNLCHIPESGMMF-IANEN 134 (248)
Q Consensus 79 I~F~~d~---l-~Ssdd~~IKIWD~~tG-------------------k~~~tie~~h~~~In~l~~~pdsgll~-sa~ed 134 (248)
++|+|++ + +++.|+.|+|||.+++ +.+.++.+ |..+|++++|+|++.+|+ +++.|
T Consensus 265 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTTEEEEEETT
T ss_pred EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCCeEEEEecCC
Confidence 9999986 4 4468999999999864 35677777 689999999999999998 89999
Q ss_pred CeEEEEEcCCC
Q psy2083 135 KKILTYYIPSL 145 (248)
Q Consensus 135 ~~I~~w~Ip~l 145 (248)
+.|++|++..+
T Consensus 344 ~~i~iw~~~~~ 354 (357)
T 3i2n_A 344 QTVRVLIVTKL 354 (357)
T ss_dssp SEEEEEEECC-
T ss_pred CcEEEEECCCc
Confidence 99999998764
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-15 Score=129.93 Aligned_cols=123 Identities=7% Similarity=0.125 Sum_probs=100.4
Q ss_pred eeEEEecCCCCCeeEEEEeCC----CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cC---CCCCCeeEEEEcCC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE----SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DH---MYGLPIRDIKFHDN 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~----~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h---~~~~pI~sI~F~~d 84 (248)
+...+..+|.+.|++++|+|+ ...++++++++ .|++||+.+++++... .| .+..+|.+++|+|+
T Consensus 9 ~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~--------~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 9 CVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSN--------RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYD 80 (366)
T ss_dssp EEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETT--------EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEEC
T ss_pred EEEEeecCCCCceEEEEEecccCCCCceEEEECCCC--------EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccC
Confidence 334555566899999999984 44466666665 8999999988765443 22 24478999999998
Q ss_pred ----c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 ----Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ----~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.|+.|+|||..+++.+..+.+ |..+|++++|+| ++.+|++|+.|+.|++|++..
T Consensus 81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 81 SNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 3 4456899999999999999999998 699999999999 999999999999999999865
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=133.38 Aligned_cols=130 Identities=10% Similarity=0.098 Sum_probs=100.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC---c--
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN---Y-- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d---~-- 85 (248)
-+++..+..+|.+.|.+++|+|++..++++|+.++ .+|+|+|||+.+++.......+|..+|++++|+|+ +
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFAR----GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRY 82 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--C----CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCC
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccC----CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCce
Confidence 34555544445799999999998877766664300 12499999999987654433334489999999998 4
Q ss_pred ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEE------EeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLC------HIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~------~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++ ++.|+.|++||.++++ ++..+.+ |...|++++ |+|++.+|++++.|+.|.+|++..-
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSC
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCC
Confidence 44 4679999999999998 8889988 699999995 5789999999999999999998763
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=146.22 Aligned_cols=122 Identities=8% Similarity=0.181 Sum_probs=105.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++.+.+.+| ++.|.+++|+|++..+++++.++ +|+|||+++++++.... .|..+|++++|+|++ +++
T Consensus 4 ~~~~~~~~h-~~~v~~i~~sp~~~~la~~~~~g--------~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 73 (814)
T 3mkq_A 4 DIKKTFSNR-SDRVKGIDFHPTEPWVLTTLYSG--------RVEIWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVG 73 (814)
T ss_dssp CCEEEEEEE-CSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEE
T ss_pred ccceeeecC-CCceEEEEECCCCCEEEEEeCCC--------EEEEEECCCCceEEEEe-cCCCcEEEEEEeCCCCEEEEE
Confidence 345666765 78999999999888788877664 99999999998877654 344899999999998 445
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+.|+|||..+|+.+.++.+ |...|++++|+|++..|++++.|++|.+|++..
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred eCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 6899999999999999999998 699999999999999999999999999999864
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.2e-15 Score=135.00 Aligned_cols=125 Identities=8% Similarity=0.152 Sum_probs=103.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--e-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--V- 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l- 86 (248)
+.+..+.+| .+.|..++|+|++. .+++++.|+ +|++||+++++++.... ..|..+|.+++|+|++ +
T Consensus 122 ~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 122 EPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDN--------VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp SCSEEEECC-SSCEEEEEECSSBTTEEEEEETTS--------CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CceEEecCC-CCeEEEEEECcCCCCEEEEEcCCC--------EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 566777766 68999999999875 466666664 99999999998887763 4456899999999987 4
Q ss_pred eeeCCCeEEEEECCCCCEEEEe-ecCCCCC-eeEEEEeCCCCEEEEE---eCCCeEEEEEcCCCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCI-ESGDQTQ-FNNLCHIPESGMMFIA---NENKKILTYYIPSLG 146 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~ti-e~~h~~~-In~l~~~pdsgll~sa---~ed~~I~~w~Ip~lG 146 (248)
+++.|+.|+|||.++++.+..+ .+ |... +.+++|+|++.+|++| +.|++|.+|++....
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRP-HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECS-SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EEecCCcEEEEeCCCCceeeeeccC-CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 4568999999999999999998 55 4554 8999999999999999 799999999987643
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-15 Score=131.16 Aligned_cols=168 Identities=8% Similarity=0.081 Sum_probs=118.8
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~ 82 (248)
.|..+++....+.. +|.+.|.+++|+|+ +..+++++.|+ +|++||+++....... .+.+..+|.+++|+
T Consensus 101 wd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 101 WDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG--------ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp EETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT--------EEEEEETTSCEEEEEECCCCSSCCEEEEEEE
T ss_pred EeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC--------EEEEEECCCCceEEEeccCCCCCCeEEEEEC
Confidence 34556666666652 45799999999994 45566666664 9999999974332222 23445789999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
|++ ++++.|+.|++||. +++++.++.. |...|++++|+|++. +|++|+.|+.|++|++......... +..+
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~ 247 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSY---IAEM 247 (383)
T ss_dssp TTTTEEEEEETTSEEEEEET-TSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCE---EEEE
T ss_pred CCCCEEEEECCCCCEEEEEC-CCCEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccce---EEEe
Confidence 997 44568999999999 5889999998 699999999999998 9999999999999999875433211 1111
Q ss_pred hhhhhcc-ccccc---c-CCceeecHhHHhhcCCccc
Q psy2083 159 TEELEEN-IIENV---Y-DDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 159 tee~e~~-~~~~~---y-d~y~fvt~~~l~~l~~~~l 190 (248)
++. ....+ - |+..+++-.....+.++.+
T Consensus 248 ----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 248 ----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 111 11111 2 5566777666566666553
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-15 Score=134.59 Aligned_cols=127 Identities=11% Similarity=0.207 Sum_probs=97.2
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCC---Cc---eeEEecCCCCCCeeEEE
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRA---DK---PLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs---~~---pl~~~~h~~~~pI~sI~ 80 (248)
..+|+++..+..+|.+.|++++|+| ++..+++++.|+ +|+|||+.+ +. +.....|. .+|++|+
T Consensus 49 ~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg--------~v~vwd~~~~~~~~~~~~~~~~~h~--~~v~~~~ 118 (437)
T 3gre_A 49 NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQG--------VIKIWNLKEIIVGEVYSSSLTYDCS--STVTQIT 118 (437)
T ss_dssp GCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTS--------EEEEEEHHHHHTTCCCSCSEEEECS--SCEEEEE
T ss_pred cccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCc--------eEEEeECcccccCcccceeeeccCC--CCEEEEE
Confidence 4578999999555589999999999 777787877774 999999987 43 34444444 8899999
Q ss_pred EcCCc--ee-eeCCCeEEEEEC----------------------------------------------------------
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSK---------------------------------------------------------- 99 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~---------------------------------------------------------- 99 (248)
|+|++ ++ ++.|++|+|||.
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 99865 33 345555555554
Q ss_pred -CCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 -DNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 -~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++++.++... |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 199 IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 455666666642 468999999999999999999999999999875
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.9e-15 Score=151.55 Aligned_cols=128 Identities=9% Similarity=0.185 Sum_probs=111.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+.+.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|.++.|+|+.
T Consensus 642 w~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 642 FKAETGEKLLDIKAH-EDEVLCCAFSSDDSYIATCSADK--------KVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCCEEEEeccC-CCCEEEEEEecCCCEEEEEeCCC--------eEEEEECCCCceEEEEc-CCCCcEEEEEEecCC
Confidence 456788888898876 78999999999888888887775 99999999999887753 345899999999953
Q ss_pred ----e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ----V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ----l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +++.|+.|++||.++|+++.++.+ |..+|++++|+|++.+|++++.|++|++|++..
T Consensus 712 ~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 712 NHLLLATGSNDFFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp SCCEEEEEETTSCEEEEETTSSSEEEEECC-CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred CceEEEEEeCCCeEEEEECCCcchhheecC-CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence 4 446899999999999999999998 699999999999999999999999999999754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.5e-16 Score=136.03 Aligned_cols=124 Identities=6% Similarity=0.033 Sum_probs=95.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
....+.+| ...|.+++|+|++..+++++.|+ +|++||++++++ +......|..+|++++|+|++ ++
T Consensus 92 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 92 QTLVLLRL-NRAATFVRWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp CEEECCCC-SSCEEEEECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred eeeEeccc-CCceEEEEECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 44555554 68999999999888888887775 899999999864 444432255899999999997 44
Q ss_pred -eeCCCeEEEEECC------------------CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 -SMDSSVVKIWSKD------------------NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 -Ssdd~~IKIWD~~------------------tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++.|+.|++||.+ +++++..+ + |...|++++|+|++.+|++++.|++|++|++..-..
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 5689999999985 35667777 5 689999999999999999999999999999876433
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-15 Score=134.06 Aligned_cols=163 Identities=8% Similarity=0.163 Sum_probs=110.5
Q ss_pred eeEEEecCCCCCeeEEEEeCCC-C-cEEEeecCceeeeecCCeeEEEEcCCCcee--EEecCCCCCCeeEEEEcCC----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPES-G-MMFIANENKKILTYYIPAFYLYDIRADKPL--RVKDHMYGLPIRDIKFHDN---- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~-g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl--~~~~h~~~~pI~sI~F~~d---- 84 (248)
....+.+| .+.|++++|+|++ | .+++++.| |+|++||++.+... ......|..+|+++.|+|+
T Consensus 95 ~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D--------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 95 KSHEHAGH-DSSVNSVCWAPHDYGLILACGSSD--------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp EEEEECCC-SSCCCEEEECCTTTCSCEEEECSS--------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EEEEccCC-CCceEEEEECCCCCCcEEEEEcCC--------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 44555554 7899999999973 4 45555555 49999999987432 2222345589999999986
Q ss_pred --------------c-ee-eeCCCeEEEEECCCC---CEEEEeecCCCCCeeEEEEeCCC----CEEEEEeCCCeEEEEE
Q psy2083 85 --------------Y-VL-SMDSSVVKIWSKDNG---SLFTCIESGDQTQFNNLCHIPES----GMMFIANENKKILTYY 141 (248)
Q Consensus 85 --------------~-l~-Ssdd~~IKIWD~~tG---k~~~tie~~h~~~In~l~~~pds----gll~sa~ed~~I~~w~ 141 (248)
. ++ ++.|++|||||.+++ +++.++.+ |...|++++|+|++ .+|++|+.|++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 2 44 468999999999865 46677887 69999999999987 7899999999999999
Q ss_pred cCCCCCCCCcccc-ccchhhhhhcc--ccccccCCceeecHhHHhhcCCccc
Q psy2083 142 IPSLGPAPKWCGF-LDNLTEELEEN--IIENVYDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 142 Ip~lG~aP~wcs~-ld~~tee~e~~--~~~~~yd~y~fvt~~~l~~l~~~~l 190 (248)
+..... ..|+.. +.. .+.. ....-.|+..++|-.+...+.+|.+
T Consensus 245 ~~~~~~-~~~~~~~~~~----~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 245 CDDASS-NTWSPKLLHK----FNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CSSTTC-CCCBCCEEEE----CSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred ccCccc-cchhhhhhhc----CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 865321 223321 211 1110 0111134556666666666666653
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.64 E-value=8.2e-15 Score=128.62 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=102.3
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
|..+++ .+..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++..... ...+..+|++++|+|
T Consensus 36 ~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 36 EKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp EEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred eCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCCC--------eEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 445565 77777765 68999999999887787777764 8999999998654332 234458999999999
Q ss_pred Cc--e-eeeCCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY--V-LSMDSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~--l-~Ssdd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ + +++.++.|++||.++++. ...+...|...|++++|+|++.+|++++.|+.|.+|++.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 97 4 456799999999998873 444433368899999999999999999999999999974
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.6e-15 Score=127.43 Aligned_cols=86 Identities=16% Similarity=0.415 Sum_probs=68.5
Q ss_pred Ccee-EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE--cCCc--
Q psy2083 11 GSLF-TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF--HDNY-- 85 (248)
Q Consensus 11 G~~~-~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F--~~d~-- 85 (248)
+..+ ..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++....|. .+|++++| ++++
T Consensus 75 ~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg--------~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 143 (368)
T 3mmy_A 75 GQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASCDK--------TAKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSC 143 (368)
T ss_dssp SCEEEEEEEEC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEEEECSSCEE
T ss_pred CceeEEEeccc-cCCEEEEEECcCCCEEEEEcCCC--------cEEEEEcCCCCceeecccc--CceEEEEEEeCCCCCE
Confidence 5555 555655 78999999999887788877774 9999999999888777665 89999999 7776
Q ss_pred ee-eeCCCeEEEEECCCCCEEEE
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~t 107 (248)
++ ++.|+.|++||.++++++..
T Consensus 144 l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 144 VMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEEEETTSEEEEECSSCSSCSEE
T ss_pred EEEccCCCcEEEEECCCCcEEEE
Confidence 44 46799999999988765433
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-14 Score=131.44 Aligned_cols=163 Identities=10% Similarity=0.159 Sum_probs=119.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
.+.....+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... .+..+|++++|+|++ +
T Consensus 206 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 206 ANHQIGTLQGH-SSEVCGLAWRSDGLQLASGGNDN--------VVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp SSCEEEEEECC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEE
T ss_pred CcceeeEEcCC-CCCeeEEEEcCCCCEEEEEeCCC--------eEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEE
Confidence 35566667665 78999999999877777777775 99999999998887653 234899999999975 4
Q ss_pred eee---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 87 LSM---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN--ENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 87 ~Ss---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~--ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
+++ .|+.|++||..+++++.++.. ...|++++|+|++..|++++ .|+.|.+|+++.-...+.+ +
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~---------~ 344 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV---------D 344 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE---------E
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE---------E
Confidence 443 599999999999999999986 78999999999999999954 8999999998762211110 1
Q ss_pred hhccc-----cccccCCceeecHhHHhhcCCccccCC
Q psy2083 162 LEENI-----IENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 162 ~e~~~-----~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
+..+. ...-.|+-.++|-.....+.+|++-..
T Consensus 345 ~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 345 IPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 11111 112234555666666667777765544
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.63 E-value=4.3e-15 Score=132.11 Aligned_cols=116 Identities=11% Similarity=0.131 Sum_probs=96.6
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CC---CCCeeEEEEcCCc--ee-eeCC-
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MY---GLPIRDIKFHDNY--VL-SMDS- 91 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~---~~pI~sI~F~~d~--l~-Ssdd- 91 (248)
|...|.+++|+|++ .+++++.+ |.|++||+++++++..... .| ..+|++++|+|++ ++ ++.|
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNN--------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 255 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTT--------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET
T ss_pred CCCCceEEEECCCc-eEEEEeCC--------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC
Confidence 46889999999987 66666555 4999999999988876531 13 5899999999987 44 4567
Q ss_pred --CeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 --SVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 --~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|++||.++++++..+... |...|++++|+|++.+|++++.|++|.+|++...
T Consensus 256 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999861 3889999999999999999999999999998763
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.8e-15 Score=134.56 Aligned_cols=123 Identities=15% Similarity=0.305 Sum_probs=97.5
Q ss_pred eeEEEecCCC------------CCeeEEEEeCCC--CcEEEeecCceeeeecCCeeEEEEcCCCcee-------------
Q psy2083 13 LFTCIESGDQ------------TQFNNLCHIPES--GMMFIANENKKILTYYIPAFYLYDIRADKPL------------- 65 (248)
Q Consensus 13 ~~~~~~~~~~------------~~V~~~~~~~~~--g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl------------- 65 (248)
+...+.+| . +.|++++|+|++ ..+++++.|+ +|++||++++...
T Consensus 73 ~~~~~~~h-~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~--------~i~iw~~~~~~~~~~~~~~~~~~g~~ 143 (447)
T 3dw8_B 73 VYSTFQSH-EPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK--------TIKLWKISERDKRPEGYNLKEEDGRY 143 (447)
T ss_dssp EEEEEECC-CCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS--------CEEEEEEEEEEEEEECCSCC------
T ss_pred Eecccccc-cccccccccccccCceEEEEEcCCCCcceEEEeCCCC--------eEEEEecccccCCcceecccCccccc
Confidence 46667765 5 779999999987 5677777664 9999999874331
Q ss_pred --------------------------EEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCEEEE-------ee
Q psy2083 66 --------------------------RVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSLFTC-------IE 109 (248)
Q Consensus 66 --------------------------~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~~~t-------ie 109 (248)
.....+|..+|++++|+|++ +++++|+.|+|||.++ ++.+.. +.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 223 (447)
T 3dw8_B 144 RDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANME 223 (447)
T ss_dssp --CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGG
T ss_pred cCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeeccccccc
Confidence 12234556899999999997 6667999999999994 555553 34
Q ss_pred cCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCC
Q psy2083 110 SGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 110 ~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~l 145 (248)
+ |...|++++|+|++ .+|++|+.|++|++|++..-
T Consensus 224 ~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 224 E-LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp G-CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred c-cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 5 68899999999999 99999999999999998763
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-14 Score=127.21 Aligned_cols=129 Identities=7% Similarity=0.046 Sum_probs=102.6
Q ss_pred chhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc
Q psy2083 7 RQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 7 ~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~ 82 (248)
|..+++....+. ..|...|.+++|+|++..+++++.++ .|++||++.+.+ .......|..+|++++|+
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 444555444432 33468899999999887787777764 899999999864 233334456899999999
Q ss_pred CCc--ee-eeCCCeEEEEEC------------------CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 83 DNY--VL-SMDSSVVKIWSK------------------DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 83 ~d~--l~-Ssdd~~IKIWD~------------------~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|++ ++ ++.|+.|++||. .+++++..+.+ |...|++++|+|++.+|++++.|+.|.+|+
T Consensus 152 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 152 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 987 44 467999999994 47899999987 689999999999999999999999999999
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
+..
T Consensus 231 ~~~ 233 (372)
T 1k8k_C 231 ADK 233 (372)
T ss_dssp GGG
T ss_pred CCC
Confidence 864
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-14 Score=128.75 Aligned_cols=125 Identities=11% Similarity=0.095 Sum_probs=100.8
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCC-CcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcC-Cc
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHD-NY 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~-g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~-d~ 85 (248)
.+.+....+.+| .+.|++++|+|++ .++++++.|+ +|+|||+.+++...... ++|..+|.+++|+| ++
T Consensus 61 ~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 61 KSYKLHRTASPF-DRRVTSLEWHPTHPTTVAVGSKGG--------DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp TTCEEEEEECCC-SSCEEEEEECSSCTTEEEEEEBTS--------CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred cccceEEeccCC-CCCEEEEEECCCCCCEEEEEcCCC--------eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC
Confidence 456677777776 7999999999987 5677776664 99999999987766543 35568999999999 44
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecC--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ +++.|+.|+|||.++ +.+..+..+ |...|++++|+|++.+|++|+.|+.|.+|++.
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 4 456899999999994 666777652 23779999999999999999999999999983
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-14 Score=132.16 Aligned_cols=124 Identities=13% Similarity=0.180 Sum_probs=101.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD 90 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd 90 (248)
...++.+| .+.|+++..+ +++.+++++.|+ +|++||+++++++.... +|..+|++++|++++ ++++.
T Consensus 113 ~~~~l~~h-~~~v~~~~~~-~~~~l~sgs~dg--------~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~~l~s~s~ 181 (464)
T 3v7d_B 113 QRTTLRGH-MTSVITCLQF-EDNYVITGADDK--------MIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGST 181 (464)
T ss_dssp EEEEEECC-SSSCEEEEEE-ETTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEECSTTEEEEEET
T ss_pred ceEEEcCC-CCCcEEEEEE-CCCEEEEEcCCC--------cEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCCEEEEEeC
Confidence 45567776 5666554444 456777777774 99999999999887763 445899999999987 55568
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEe--CCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHI--PESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~--pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
|++|++||.++|+.+..+.+ |..+|++++|+ |++.+|++|+.|++|++|+++.....
T Consensus 182 dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 99999999999999999998 69999999998 58899999999999999999875443
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.9e-15 Score=136.77 Aligned_cols=118 Identities=9% Similarity=0.128 Sum_probs=93.8
Q ss_pred CCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--eee-eCCCeE
Q psy2083 20 GDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VLS-MDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~S-sdd~~I 94 (248)
+|.+.|++++|+|.++ .++++|.|+ +|+|||++++...... .|....++.+++|++++ +++ +.|+.|
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i 233 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNV 233 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSS--------CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcE
Confidence 3478999999998554 566666664 9999999987543333 44545678999999997 444 579999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++||.+ |+.+.++.+ |..+|++++|+|++. +|++|+.|+.|++|++.....
T Consensus 234 ~~wd~~-~~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 234 ILLNMD-GKELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp EEEESS-SCBCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred eeeccC-cceeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 999987 677778888 699999999999985 788999999999999876543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-14 Score=122.62 Aligned_cols=122 Identities=12% Similarity=0.230 Sum_probs=99.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.++....+..+ ...|.+++++| ++..+++++.++ .|++||. ++++......+..+|++++|+|++ +
T Consensus 131 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~--------~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~ 199 (313)
T 3odt_A 131 EGSLVYNLQAH-NASVWDAKVVSFSENKFLTASADK--------TIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFI 199 (313)
T ss_dssp TTEEEEEEECC-SSCEEEEEEEETTTTEEEEEETTS--------CEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEE
T ss_pred CCcEEEecccC-CCceeEEEEccCCCCEEEEEECCC--------CEEEEec--CceEEEEeccCcccEEEEEEcCCCeEE
Confidence 45566666665 68999999998 555566666664 9999994 445555543355899999999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++.++.|++||.++++++..+.+ |..+|++++|+|++ .|++++.|+.|.+|++..
T Consensus 200 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred EccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 567899999999999999999998 68999999999999 689999999999999865
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-14 Score=126.79 Aligned_cols=128 Identities=9% Similarity=0.245 Sum_probs=99.2
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCceeE-EecCCCCCCeeEEEE
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPLR-VKDHMYGLPIRDIKF 81 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-~~~h~~~~pI~sI~F 81 (248)
|..+++ .+..+..| ...|.+++|+|+ +..+++++.|+ +|++||++++.... .....|..+|++++|
T Consensus 85 d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCCC--------cEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 444555 55555554 689999999998 66677776664 99999999873321 122234489999999
Q ss_pred cC-------------Cc---eeeeCCCeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCC---CCEEEEEeCCCeEE
Q psy2083 82 HD-------------NY---VLSMDSSVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPE---SGMMFIANENKKIL 138 (248)
Q Consensus 82 ~~-------------d~---l~Ssdd~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pd---sgll~sa~ed~~I~ 138 (248)
+| ++ ++++.|+.|+|||.++++ +...+.+ |..+|++++|+|+ +.+|++++.|+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEE
Confidence 99 44 445689999999998765 4456676 6899999999999 89999999999999
Q ss_pred EEEcCC
Q psy2083 139 TYYIPS 144 (248)
Q Consensus 139 ~w~Ip~ 144 (248)
+|++..
T Consensus 235 iwd~~~ 240 (379)
T 3jrp_A 235 IWTQDN 240 (379)
T ss_dssp EEEESS
T ss_pred EEeCCC
Confidence 999876
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.62 E-value=8.3e-15 Score=134.55 Aligned_cols=122 Identities=11% Similarity=0.223 Sum_probs=98.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+.+..+..| .+.|++++|+|++..++ +++.+ |+|++||+|+ +.|+.... .|..+|.+|+|+|++ +
T Consensus 268 ~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 268 KPSHTVDAH-TAEVNCLSFNPYSEFILATGSAD--------KTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp SCSEEEECC-SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEE
T ss_pred cceeEeecC-CCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEE
Confidence 566677655 68899999999887655 55555 4999999998 46666653 234899999999986 4
Q ss_pred e-eeCCCeEEEEECCC--------------CCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 87 L-SMDSSVVKIWSKDN--------------GSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~t--------------Gk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++.|+.|+|||..+ .+.+..+.+ |...|++++|+|++. +|++++.|+.|++|.++.
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 4 45799999999987 356667776 688999999999998 999999999999999764
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-15 Score=135.26 Aligned_cols=121 Identities=13% Similarity=0.139 Sum_probs=90.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCC-c--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDN-Y--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d-~--l~ 87 (248)
......++ ...|++++|+|.++. +++|+.| |+|+|||+.++... ....++|..+|++|+|+|. + ++
T Consensus 111 ~~~~~~~~-~~~V~~l~~~P~~~~~lasGs~d--------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 111 ILQKAAPF-DRRATSLAWHPTHPSTVAVGSKG--------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp SCCEEEEC-SSCEEEEEECSSCTTCEEEEETT--------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE
T ss_pred ecccCCCC-CCCEEEEEEeCCCCCEEEEEeCC--------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE
Confidence 34444454 578999999996654 5555555 49999999987543 3344566699999999984 4 54
Q ss_pred -eeCCCeEEEEECCCCCEEEEeecCC--CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIESGD--QTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~~h--~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|++|+|||.+++.. ..+..+| ...+.+++|+|++.+|++|+.|+.|.+|++.
T Consensus 182 s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp EECSSSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred EEeCCCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 46899999999986544 4443312 3467899999999999999999999999975
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-15 Score=134.35 Aligned_cols=163 Identities=9% Similarity=0.062 Sum_probs=119.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
.|..+++++..++++ +.|.+++|+|++.++++++++ .+.+|+..+++.+.. ....++.+|++|+|+|+
T Consensus 162 wd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 162 IDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITGS---------SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp EETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECSS---------CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred eECCCCcEEEEeCCC--CceEEEEEccCCceEEeccce---------eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence 456778888888754 689999999987766666544 578888888876554 34455689999999999
Q ss_pred c--ee-eeCCC----eEEEEECCCCCE----EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 85 Y--VL-SMDSS----VVKIWSKDNGSL----FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 85 ~--l~-Ssdd~----~IKIWD~~tGk~----~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
+ ++ ++.++ .+++||...+.. ...+.+ |..+|++++|+|||.+|++|+.|++|++|++....+.
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~----- 304 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS----- 304 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE-----
T ss_pred CCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE-----
Confidence 7 33 34444 688999887654 234556 6889999999999999999999999999998753221
Q ss_pred cccchhhhhhcc--c---cccccCCceeecHhHHhhcCCccc
Q psy2083 154 FLDNLTEELEEN--I---IENVYDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 154 ~ld~~tee~e~~--~---~~~~yd~y~fvt~~~l~~l~~~~l 190 (248)
..+ ++-| . ...-.|+-.++|-.....+.++++
T Consensus 305 --~~~---~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 305 --KIF---KQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp --EEE---TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred --EEe---cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 111 1111 1 223357778888888888888876
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=141.88 Aligned_cols=128 Identities=13% Similarity=0.188 Sum_probs=109.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+.+..+.+| .+.|.+++|+|++..+++++.++ +|++||+++++++.... .|..+|++++|+|++
T Consensus 40 wd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 40 WNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTK 109 (814)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCC
Confidence 455778899998876 68999999999888888877764 99999999998877653 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|++||.+++ .....+.+ |..+|.+++|+| ++.+|++++.|++|.+|++..
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 44 568999999999987 66677777 689999999999 888999999999999999854
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-14 Score=130.29 Aligned_cols=126 Identities=7% Similarity=0.071 Sum_probs=106.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++++..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|.++.|++..
T Consensus 295 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 364 (464)
T 3v7d_B 295 WDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMDT--------TIRIWDLENGELMYTLQ-GHTALVGLLRLSDKF 364 (464)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEECSSE
T ss_pred EECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCE
Confidence 466788888888776 68999999999888788877775 99999999999887763 345899999999766
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|++||.++++....+.. ...+..++|+|++.+|++|+ |+.|++|++..
T Consensus 365 l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE-TTEEEEEETTT
T ss_pred EEEEeCCCcEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec-CCeEEEEECCC
Confidence 5557899999999999988777764 67888999999999999999 89999999876
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-14 Score=129.79 Aligned_cols=118 Identities=9% Similarity=0.159 Sum_probs=93.1
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe------cCCCCCCeeEEEEcCCc---
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK------DHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~------~h~~~~pI~sI~F~~d~--- 85 (248)
.+..+|...|.+++|+|++..++++ .| |+|+|||++++ +++... ...|..+|++++|+|++
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 241 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DD--------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT 241 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CS--------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CC--------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE
Confidence 4444458999999999977666665 55 49999999954 444422 22445899999999984
Q ss_pred ee-eeCCCeEEEEECCCCCE----EEEeecCCCC------------CeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSL----FTCIESGDQT------------QFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~----~~tie~~h~~------------~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++. +..+.. |.. +|++++|+|+|.+|+++++ +.|++|++..
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 44 46899999999999987 788887 454 8999999999999999999 9999999976
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-14 Score=131.95 Aligned_cols=123 Identities=11% Similarity=0.244 Sum_probs=98.0
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc---e-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY---V-L 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~---l-~ 87 (248)
..+.+| .+.|.+++|+|+++.++++++++ |+|++||+|++ +++.... .|..+|++|+|+|++ + +
T Consensus 225 ~~~~~h-~~~v~~v~~~p~~~~~l~s~~~d-------g~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~t 295 (430)
T 2xyi_A 225 NIFTGH-TAVVEDVAWHLLHESLFGSVADD-------QKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILAT 295 (430)
T ss_dssp EEECCC-SSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEE
T ss_pred eeecCC-CCCEeeeEEeCCCCCEEEEEeCC-------CeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEE
Confidence 344444 78899999999666655444433 49999999987 5665542 344899999999986 4 4
Q ss_pred eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++.|++|+|||.++ ++++.++.. |...|++++|+|++ .+|++++.|++|.+|++...+.
T Consensus 296 g~~dg~v~vwd~~~~~~~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 296 GSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp EETTSEEEEEETTCTTSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred EeCCCeEEEEeCCCCCCCeEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 56899999999998 678889988 68999999999999 5799999999999999987654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=132.53 Aligned_cols=117 Identities=7% Similarity=0.020 Sum_probs=96.4
Q ss_pred EEecCCCCCeeEEEEeCC---CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 16 CIESGDQTQFNNLCHIPE---SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~---~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
.+.+| .+.|.+++|+|+ +.++++++.|+ +|++||+++++++.....+|..+|++++|+ ++ ++ ++
T Consensus 190 ~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGH-VSMLTDVHLIKDSDGHQFIITSDRDE--------HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp CSEEC-SSCEEEEEEEECTTSCEEEEEEETTS--------CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred eeecc-cCceEEEEEcCCCCCCcEEEEEcCCC--------cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 44444 688999999998 65677777664 999999999988776444555899999999 76 44 56
Q ss_pred CCCeEEEEECCCCCEEEEeecC------------------------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESG------------------------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~------------------------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
.|++|+|||.++|+++.++..+ ....|.+++++|++.+|++++ .++.|.+|++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 8999999999999999988631 135789999999999999999 8999999998
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=132.77 Aligned_cols=115 Identities=9% Similarity=0.152 Sum_probs=88.2
Q ss_pred CCCCCeeEEEEeC--------CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---ee
Q psy2083 20 GDQTQFNNLCHIP--------ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 20 ~~~~~V~~~~~~~--------~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~ 87 (248)
+|.+.|++++|+| ++.+|+++|.|. +|+|||++++.++.. ..|. .+|.+|+|+|++ ++
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~--------tv~~Wd~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDC--------TLIIWRLTDEGPILAGYPLS--SPGISVQFRPSNPNQLI 203 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS--------EEEEEEEETTEEEEEEEECS--SCEEEEEEETTEEEEEE
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEECCC--------eEEEEECCCCceeeeecCCC--CCcEEEEECCCCCceEE
Confidence 4589999999997 555666777664 999999999877654 4555 799999999985 44
Q ss_pred -eeCCCeEEEEECCCCCEEEEeec------------------------CCCCCeeEEEEe-CCCCEEEEEeCCCeEEEEE
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIES------------------------GDQTQFNNLCHI-PESGMMFIANENKKILTYY 141 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~------------------------~h~~~In~l~~~-pdsgll~sa~ed~~I~~w~ 141 (248)
++.|++|+|||.++++....... +|...+.++.|+ ||+..|++++.|+++++|+
T Consensus 204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 46899999999998875443221 246788899987 7999999999999999999
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
+..
T Consensus 284 ~~~ 286 (393)
T 4gq1_A 284 LFA 286 (393)
T ss_dssp C--
T ss_pred Ccc
Confidence 743
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-14 Score=137.03 Aligned_cols=118 Identities=8% Similarity=0.016 Sum_probs=91.5
Q ss_pred EEecCCCCCeeEEEEeCC------CCcEEEeecCceeeeecCCeeEEEEcCCCc-----------eeEEecCCCCCCeeE
Q psy2083 16 CIESGDQTQFNNLCHIPE------SGMMFIANENKKILTYYIPAFYLYDIRADK-----------PLRVKDHMYGLPIRD 78 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~------~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----------pl~~~~h~~~~pI~s 78 (248)
++.++ .+.|.+++|+|+ +++|++++.|+ +|+|||+..+. |..+. .+|..+|++
T Consensus 202 ~l~~~-~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg--------tvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~s 271 (524)
T 2j04_B 202 TIVHS-FGEVWDLKWHEGCHAPHLVGCLSFVSQEG--------TINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITT 271 (524)
T ss_dssp EEEEC-CCSEEEEEECSSCCCSSSSCEEEEEETTS--------CEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEE
T ss_pred EEEec-CCcEEEEEECCCCCCCCCCceEEEEecCC--------eEEEEEcCCCccccccceeecCceEEE-EcCCCCEEE
Confidence 34544 688999999996 34566666664 99999998763 22222 234589999
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCC-CEEEEeecCCCCCeeEE--EEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNL--CHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l--~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
++|+++. ++++.|++|+|||++++ .+...+.+ |..+|+++ +|+|+| .+|++|+.|++|++|++..
T Consensus 272 v~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 272 FDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEESSSSEEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEecCCCeEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 9999876 44568999999999987 45667787 69999999 567887 8999999999999999743
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.8e-14 Score=143.73 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=103.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E--------ecCCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V--------KDHMYGLP 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~--------~~h~~~~p 75 (248)
.|..+|+++.++.+ .+.|++++|+|++.++++++.|+ +|++||+++++... . ...+|..+
T Consensus 84 Wd~~~~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs~dg--------~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~ 153 (902)
T 2oaj_A 84 LSLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNG--------SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSP 153 (902)
T ss_dssp EETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEETTS--------CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCC
T ss_pred EECCCCcEEEEEcC--CCCEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCccccceeccccccccccccCCCC
Confidence 35567888888864 37899999999888788877774 99999999986531 1 11345589
Q ss_pred eeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecC-----------------CCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 76 IRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESG-----------------DQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 76 I~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~-----------------h~~~In~l~~~pdsgll~sa~ed 134 (248)
|++|+|+|+. +++++|++| |||.++++++.++..+ |...|++++|+|||.+|++|++|
T Consensus 154 V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp CCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 9999999963 445689999 9999999999888751 13679999999999999999999
Q ss_pred CeEEEEEcCC
Q psy2083 135 KKILTYYIPS 144 (248)
Q Consensus 135 ~~I~~w~Ip~ 144 (248)
++|++|++..
T Consensus 233 g~i~lWd~~~ 242 (902)
T 2oaj_A 233 NSLVFWDANS 242 (902)
T ss_dssp CCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 9999999854
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6e-15 Score=134.38 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=82.3
Q ss_pred EEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE----ecCCCCCCeeEEEEcC--------Cc--eee-eC
Q psy2083 27 NLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV----KDHMYGLPIRDIKFHD--------NY--VLS-MD 90 (248)
Q Consensus 27 ~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~~h~~~~pI~sI~F~~--------d~--l~S-sd 90 (248)
.+.++|.++. +++++.| ++|+|||++.+..... ...+|..+|++|+|+| ++ |+| ++
T Consensus 93 ~~~~~~~~~~~las~~~d--------~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQD--------NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp ----CCEEEEEEEEEETT--------SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ceeecCCCCCEEEEEeCC--------CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3344444444 4455555 4999999999854322 1345669999999997 44 554 69
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
|++|||||.+++.++..+.+ |..+|.+++|+|+++ +|++|+.|++|++|++..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 99999999999888888887 589999999999874 899999999999999754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-14 Score=130.30 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=101.4
Q ss_pred cCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE----E-ecCCCCCCeeEEEEcC
Q psy2083 10 KGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR----V-KDHMYGLPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~----~-~~h~~~~pI~sI~F~~ 83 (248)
+|+++..+.. .+...|.+++|+|++..+++++.++ .|.+||+++++... . ..|. .+|++|+|+|
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g--------~v~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~sp 205 (450)
T 2vdu_B 136 SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG--------DVYSIDINSIPEEKFTQEPILGHV--SMLTDVHLIK 205 (450)
T ss_dssp SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTSCCCSSCCCCCSEECS--SCEEEEEEEE
T ss_pred CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC--------cEEEEecCCcccccccceeeeccc--CceEEEEEcC
Confidence 6777777752 2357899999999887787776664 89999999886542 2 3444 8999999999
Q ss_pred C---c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 N---Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d---~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ + ++ ++.|+.|+|||..+++.+.++..+|...|++++|+ |+.+|++|+.|++|++|++..
T Consensus 206 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 206 DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 8 6 44 46799999999999999888543368999999999 999999999999999999865
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-14 Score=143.33 Aligned_cols=118 Identities=10% Similarity=0.155 Sum_probs=101.4
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~ 92 (248)
.+.+| .+.|++++|+|++..+++++.|+ +|++||+++++++.... +|..+|.+++|+|++ ++ ++.|+
T Consensus 610 ~~~~h-~~~v~~~~~s~~~~~l~s~~~d~--------~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 610 VVRPH-TDAVYHACFSQDGQRIASCGADK--------TLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp EECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEecc-cccEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCC
Confidence 34454 78999999999888888877774 99999999998877653 445899999999997 44 46899
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|+|||..+|+++.++.+ |...|++++|+| ++.++++|+.|+.|.+|++..
T Consensus 680 ~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp EEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred eEEEEECCCCceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 999999999999999998 699999999999 556899999999999999865
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-15 Score=137.02 Aligned_cols=114 Identities=11% Similarity=0.203 Sum_probs=91.0
Q ss_pred CCCeeEEEEeCCCCcEEE---eecCceeeeecCCeeEEEEcCCC--------ceeEE--ecCCCCCCeeEEEEcCC-c--
Q psy2083 22 QTQFNNLCHIPESGMMFI---ANENKKILTYYIPAFYLYDIRAD--------KPLRV--KDHMYGLPIRDIKFHDN-Y-- 85 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~---ag~d~~~~~~~~G~V~LwDlRs~--------~pl~~--~~h~~~~pI~sI~F~~d-~-- 85 (248)
.+.|.+++|+|++.++++ +++.+ |+|+|||++++ +|+.. ...+|+.+|++|+|+|+ .
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYG-------SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTE-------EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCC-------ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 457999999998877773 33333 49999999875 44332 22345589999999997 3
Q ss_pred ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ ++.|++|+|||.+++..+....+ |...|++++|+|+|.+|++|+.|++|.+|++.
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEECCCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 44 46899999999999977766666 57899999999999999999999999999975
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.1e-14 Score=142.78 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=97.4
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee-eCCCeEEEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS-MDSSVVKIW 97 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S-sdd~~IKIW 97 (248)
+|.+.|++++|+|++.++++++.|+ +|+|||....+.+....| ..+|++|+|+|+. |++ +.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg--------~I~lw~~~~~~~~~~~~~--~~~V~~l~fspg~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTG--------EVHIYGQQQVEVVIKLED--RSAIKEMRFVKGIYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTS--------EEEEECSTTCEEEEECSS--CCCEEEEEEETTTEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCC--------EEEEEeCCCcEEEEEcCC--CCCEEEEEEcCCCEEEEEECcCeEEEE
Confidence 3478999999999888787777774 999999988776655544 4899999999954 554 589999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.++++++.++.. ...|++++|+|++.+|++|+.|++|++|++..
T Consensus 85 d~~~~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 85 SLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp ETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred ECCCCcEEEEEcC--CCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999974 68999999999999999999999999999865
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-14 Score=127.84 Aligned_cols=115 Identities=14% Similarity=0.214 Sum_probs=94.7
Q ss_pred CCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----CCCeeEEEEcCCc---ee-eeC
Q psy2083 21 DQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----GLPIRDIKFHDNY---VL-SMD 90 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~~pI~sI~F~~d~---l~-Ssd 90 (248)
|.+.|.+++|+|+++.++ +++.+ |+|++||+++++++....... ..+|++++|+|++ ++ +++
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSS--------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSS--------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCC--------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 468899999999855544 54444 499999999998877764321 5789999999985 44 457
Q ss_pred CC---eEEEEECCCC-CEEEEee-cCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SS---VVKIWSKDNG-SLFTCIE-SGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~---~IKIWD~~tG-k~~~tie-~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ .|++||.+++ +++..+. + |...|++++|+| ++.+|++++.|++|++|++..
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CCCCceEEEEeCCCCCCCcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 77 9999999987 6777887 6 689999999999 999999999999999999865
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.5e-14 Score=139.41 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=89.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC---CCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY---GLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~---~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
++.|++++|+|++..+++++.++ +|+|||..+ .+...+|.- +..|.+++||||+ |+ +++|++|+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg--------~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNG--------NVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTS--------CEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCC--------cEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 68899999999998888888875 999999544 455445320 1259999999998 44 46899999
Q ss_pred EEECCCCC-------EEEEee---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 96 IWSKDNGS-------LFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk-------~~~tie---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|||..+|+ .+.++. .+|...|.+++|+||| +++++.|+.|++|++-.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC
Confidence 99999986 367874 2367899999999999 88899999999999743
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.4e-14 Score=123.09 Aligned_cols=127 Identities=12% Similarity=0.127 Sum_probs=101.9
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec------------CCCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD------------HMYG 73 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~------------h~~~ 73 (248)
+...++....+.+| .+.|++++|+| ++..+++++.|+ +|++||+.++....... ..|.
T Consensus 29 ~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 29 GLELNKDRDVERIH-GGGINTLDIEPVEGRYMLSGGSDG--------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp TEEECTTEEECCCC-SSCEEEEEECTTTCCEEEEEETTS--------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred ccccCcceeeeecc-CCcEEEEEEecCCCCEEEEEcCCC--------eEEEEECCCCcccceEeccccccccccccccCC
Confidence 34456666666665 79999999999 777777777774 99999999885543322 2355
Q ss_pred CCeeEEEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC---CEEEEEeCCCeEEEEEcCC
Q psy2083 74 LPIRDIKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 74 ~pI~sI~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds---gll~sa~ed~~I~~w~Ip~ 144 (248)
.+|++++|+| +. ++ ++.|+.|++||.++++....+.. ...+.++++.|.+ .++++++.++.|.+|++..
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 8999999999 44 44 45799999999999999998886 7899999999855 4999999999999999865
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-13 Score=121.97 Aligned_cols=126 Identities=10% Similarity=0.145 Sum_probs=104.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..+..+ ..+.+++|+|++..++++++.+ |+|++||+++++.+....+. .+|.+++|+|++
T Consensus 17 ~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-------~~i~v~d~~~~~~~~~~~~~--~~v~~~~~spdg 85 (391)
T 1l0q_A 17 IDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-------NDVSIIDTATNNVIATVPAG--SSPQGVAVSPDG 85 (391)
T ss_dssp EETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTS
T ss_pred EECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-------CeEEEEECCCCeEEEEEECC--CCccceEECCCC
Confidence 567789999998876 5689999999888776555433 49999999999888877655 489999999997
Q ss_pred --e-eee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE-EEEeCCCeEEEEEcCC
Q psy2083 86 --V-LSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll-~sa~ed~~I~~w~Ip~ 144 (248)
+ +++ +++.|++||..+++.+..+.. ...+++++|+|++..| ++++.+++|.+|++..
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 3 344 679999999999999988887 5688999999999877 6778899999999754
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.8e-14 Score=122.59 Aligned_cols=121 Identities=10% Similarity=0.104 Sum_probs=97.0
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cce-eEEecCCCCCCeeEEEEcC-Cc--
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKP-LRVKDHMYGLPIRDIKFHD-NY-- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~p-l~~~~h~~~~pI~sI~F~~-d~-- 85 (248)
++++.++. |.+.|.++++.|++ +++++.++ +|++||+++ +.. .......+..+|.+|+|+| ++
T Consensus 141 ~~~~~~~~--~~~~v~~~~~~~~~--l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 141 NLNSNNTK--VKNKIFTMDTNSSR--LIVGMNNS--------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG 208 (342)
T ss_dssp ESCSSSSS--SCCCEEEEEECSSE--EEEEESTT--------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE
T ss_pred CCeeeEEe--eCCceEEEEecCCc--EEEEeCCC--------eEEEEECCccccccceeeecCCCCceeEEEECCCCCCE
Confidence 55555555 35789999998865 66766664 899999998 543 3334444558999999999 76
Q ss_pred -eeeeCCCeEEEEECCCC------CEEEEeecCCCC---------CeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNG------SLFTCIESGDQT---------QFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tG------k~~~tie~~h~~---------~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.++.|+|||.+.+ +....+.. |.. +|++++|+|++.+|++++.|+.|.+|++..
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTTCEEEEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEecCCcEEEEEEcCCCcccccccceeeec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 55568999999999987 88888887 444 999999999999999999999999999864
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.55 E-value=9.2e-14 Score=120.76 Aligned_cols=115 Identities=12% Similarity=0.168 Sum_probs=94.0
Q ss_pred ecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEEecCCCCCCeeEEEEcCCc---e-eee
Q psy2083 18 ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRVKDHMYGLPIRDIKFHDNY---V-LSM 89 (248)
Q Consensus 18 ~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~~~h~~~~pI~sI~F~~d~---l-~Ss 89 (248)
..+|.+.|.+++|+|++..+++++.|+ +|++||+.++. +.....|. .+|++++|+|++ + +++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~--------~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDG--------SLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCC--------eEEEEEeCCCCccccceeeeecC--CceEEEEECCCCCcEEEEEc
Confidence 334578999999999888788877775 99999999887 44445554 899999999873 4 446
Q ss_pred CCCeEEEEEC-CCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSK-DNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~-~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|+.|++||. ++++. ..+.+ .|...|++++|+| +++|++++.|+.|.+|++..
T Consensus 77 ~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 7999999999 87765 55554 0489999999999 99999999999999999864
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-13 Score=127.96 Aligned_cols=123 Identities=11% Similarity=0.141 Sum_probs=102.6
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC---CeeEEEEcCC-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL---PIRDIKFHDN- 84 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~---pI~sI~F~~d- 84 (248)
+++.+..+.+| .+.|..++|+|++. .+++++.|+ +|++||+++++++.... .|.. +|++++|+|+
T Consensus 149 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~--------~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 149 SGNSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDG--------SVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp TCCEEEECCSC-SSCEEEEEECSSSSCEEEEEETTT--------EEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTT
T ss_pred CCCcceeeecC-CccEEEEEECCCCCcEEEEEeCCC--------cEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCC
Confidence 45566666665 78999999999877 466666664 99999999998877653 2336 8999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEe-e---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCI-E---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~ti-e---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ ++.|+.|++||.++++.+..+ . . |..+|++++|+ ++.+|++++.|+.|++|++..
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP-VQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBC-CCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccc-cCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 6 44 568999999999999999999 5 5 68999999999 999999999999999999875
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.1e-13 Score=114.64 Aligned_cols=128 Identities=9% Similarity=0.170 Sum_probs=105.8
Q ss_pred chhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|+++.++. ++|...|.+++|+|++..+++++.|+ +|+|||+++++++.... +|...+.++.+.+..
T Consensus 51 d~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~~~~~~~~~~~-~h~~~~~~~~~~~~~ 121 (318)
T 4ggc_A 51 SASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQKRLRNMT-SHSARVGSLSWNSYI 121 (318)
T ss_dssp ETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEETTE
T ss_pred ECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeecCCceeEEEec-CccceEEEeecCCCE
Confidence 667899998875 33467899999999888788877775 99999999999887652 344788888888777
Q ss_pred ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.++.+++|+..++. .+..+.+ |...+..+++.+++.+|++++.|+.|++|++..
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEEecCCceEeeecCCCceeEEEEcC-ccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 44 5689999999998764 5566676 689999999999999999999999999999864
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.6e-14 Score=138.02 Aligned_cols=120 Identities=10% Similarity=0.166 Sum_probs=96.4
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c---ee
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y---VL 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~---l~ 87 (248)
..+.+| .+.|++++|+|++..+++++.|+ +|++||++++ +++... .+|..+|++++|+++ + ++
T Consensus 3 ~~l~gH-~~~V~~l~~s~dg~~latg~~dg--------~I~vwd~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 3 VIANAH-NELIHDAVLDYYGKRLATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp -----C-CCCEEEECCCSSSCCEEEEETTT--------EEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCTTSCSEEEE
T ss_pred eecccC-cceeEEEEECCCCCeEEEEECCC--------cEEEEecCCCCCccceec-cCCcCceEEEEecCCCCCCEEEE
Confidence 345555 79999999999888888887775 9999999854 444443 344589999999876 5 44
Q ss_pred eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 88 SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
++.|++|++||.++++ ....+.+ |..+|++++|+|+ +.++++|+.|++|++|++..-
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred EeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 5689999999999987 6677777 6899999999999 999999999999999998664
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-13 Score=125.06 Aligned_cols=127 Identities=13% Similarity=0.237 Sum_probs=102.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~ 83 (248)
.|..+|+++.++.++ ...+..+.+. +..+++++.|+ +|++||+++++++.... ..|..+|++++|++
T Consensus 304 ~d~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 304 WDVETGNCIHTLTGH-QSLTSGMELK--DNILVSGNADS--------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp EETTTCCEEEEECCC-CSCEEEEEEE--TTEEEEEETTS--------CEEEEETTTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred EECCCCCEEEEEcCC-cccEEEEEEe--CCEEEEEeCCC--------eEEEEECCCCcEEEEEccCCCCCCCEEEEEECC
Confidence 466788888888776 5666666553 44566666664 99999999999887753 13558999999987
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEee-----cCCCCCeeEEEEeCCCCEEEEEeCCCe----EEEEEcCC
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIE-----SGDQTQFNNLCHIPESGMMFIANENKK----ILTYYIPS 144 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie-----~~h~~~In~l~~~pdsgll~sa~ed~~----I~~w~Ip~ 144 (248)
+. ++++.|+.|+|||..+|+.+..+. + |...|++++|+|++.++++|+.|++ |.+|++..
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG-SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGG-GTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEeCCCeEEEEECCCCceeeeeeccccCC-CCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 76 555789999999999999999883 3 4789999999999999999999997 99998753
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-13 Score=123.31 Aligned_cols=124 Identities=5% Similarity=0.108 Sum_probs=103.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| .+.|.++++. +..+++++.|+ +|++||+.+++++.... +|..+|.++.|+++.
T Consensus 144 wd~~~~~~~~~~~~h-~~~v~~~~~~--~~~l~s~~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 211 (445)
T 2ovr_B 144 WSAVTGKCLRTLVGH-TGGVWSSQMR--DNIIISGSTDR--------TLKVWNAETGECIHTLY-GHTSTVRCMHLHEKR 211 (445)
T ss_dssp EETTTCCEEEECCCC-SSCEEEEEEE--TTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEEETTE
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEec--CCEEEEEeCCC--------eEEEEECCcCcEEEEEC-CCCCcEEEEEecCCE
Confidence 456688888888876 7889998887 34676776664 99999999998877653 345899999998877
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|++||.++++++..+.+ |..+|+++++ ++..+++|+.|+.|.+|++..
T Consensus 212 l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 212 VVSGSRDATLRVWDIETGQCLHVLMG-HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp EEEEETTSEEEEEESSSCCEEEEEEC-CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGG
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEcC-CcccEEEEEE--CCCEEEEEcCCCEEEEEECCC
Confidence 5567899999999999999999998 6899998888 788999999999999999754
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-13 Score=121.79 Aligned_cols=128 Identities=9% Similarity=0.165 Sum_probs=106.5
Q ss_pred chhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|++...+.. +|...|++++|+|++.++++|+.|+ +|+|||+++++++.... +|...|.++.+++..
T Consensus 131 d~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~~~~~~~~~-~h~~~v~~~s~~~~~ 201 (420)
T 4gga_A 131 SASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQKRLRNMT-SHSARVGSLSWNSYI 201 (420)
T ss_dssp ETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEEETTE
T ss_pred ECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCCCcEEEEEe-CCCCceEEEeeCCCE
Confidence 5678998887753 3467899999999888787877774 99999999998887652 445899999998777
Q ss_pred ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.+++||.... ..+.++.+ |...+..++++|++.++++++.|+.|.+|++..
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~~~~~~~-h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEEeCCCceeEeeecccceeeEEecc-cccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 44 568999999998874 45677787 699999999999999999999999999999754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.5e-13 Score=124.23 Aligned_cols=124 Identities=7% Similarity=0.151 Sum_probs=101.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|++...+.+| .+.|.++++ ++..+++++.|+ +|++||+++++++.... .|..+|.++.|+++.
T Consensus 158 wd~~~~~~~~~~~~h-~~~v~~l~~--~~~~l~sg~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~ 225 (435)
T 1p22_A 158 WDKNTLECKRILTGH-TGSVLCLQY--DERVIITGSSDS--------TVRVWDVNTGEMLNTLI-HHCEAVLHLRFNNGM 225 (435)
T ss_dssp EESSSCCEEEEECCC-SSCEEEEEC--CSSEEEEEETTS--------CEEEEESSSCCEEEEEC-CCCSCEEEEECCTTE
T ss_pred EeCCCCeEEEEEcCC-CCcEEEEEE--CCCEEEEEcCCC--------eEEEEECCCCcEEEEEc-CCCCcEEEEEEcCCE
Confidence 456678888888876 688888887 456677776664 99999999998877653 345899999999877
Q ss_pred -eeeeCCCeEEEEECCCCCEE---EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLF---TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~---~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.. ..+.+ |...|+++++ ++.+|++|+.|++|++|++..
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 55678999999999998766 55666 6899999988 788999999999999999865
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-13 Score=132.48 Aligned_cols=120 Identities=11% Similarity=0.150 Sum_probs=95.1
Q ss_pred eeEEEecCCC----CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-------eEEe---cCCCCCCeeE
Q psy2083 13 LFTCIESGDQ----TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-------LRVK---DHMYGLPIRD 78 (248)
Q Consensus 13 ~~~~~~~~~~----~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-------l~~~---~h~~~~pI~s 78 (248)
+++.++ |+. ..|.+++|+||+..|++|+.|+ +|+|||+++++. +.+. ..+|..+|.+
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG--------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG--------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS--------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC--------EEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 555566 532 2599999999999899988885 999999999852 3442 1334579999
Q ss_pred EEEcCCc-eeeeCCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY-VLSMDSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~-l~Ssdd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+|+|++ ++++.|++||+||..+++. ..++.++|...|.+++|+ |+.|++++ +++|++|++..
T Consensus 188 VawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~ 254 (588)
T 2j04_A 188 IVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN 254 (588)
T ss_dssp EEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT
T ss_pred EEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC
Confidence 9999999 5667899999999998873 457753367899999999 68999998 69999999764
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-13 Score=123.73 Aligned_cols=166 Identities=11% Similarity=0.215 Sum_probs=116.5
Q ss_pred chhcCcee---EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 7 RQDKGSLF---TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 7 ~~~~G~~~---~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
|..++... ..+.+| .+.|+.+.+ ++..+++++.|+ +|++||+++++++.... .|..+|.++.|++
T Consensus 239 d~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~~~dg--------~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~ 306 (435)
T 1p22_A 239 DMASPTDITLRRVLVGH-RAAVNVVDF--DDKYIVSASGDR--------TIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 306 (435)
T ss_dssp ECSSSSCCEEEEEECCC-SSCEEEEEE--ETTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEEET
T ss_pred eCCCCCCceeeeEecCC-CCcEEEEEe--CCCEEEEEeCCC--------eEEEEECCcCcEEEEEc-CCCCcEEEEEeCC
Confidence 34445544 444444 688888887 456677777664 99999999998887653 3348999999987
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC----CCCccccccch
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP----APKWCGFLDNL 158 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~----aP~wcs~ld~~ 158 (248)
+. ++++.|+.|++||.++|+++.++.+ |...|++++| ++.+|++|+.|+.|++|++..... ....| +
T Consensus 307 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--~--- 378 (435)
T 1p22_A 307 RLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC--L--- 378 (435)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTE--E---
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEEeC-CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchh--e---
Confidence 66 5557899999999999999999998 6899999888 889999999999999999754221 11001 1
Q ss_pred hhhhhccc---cccccCCceeecHhHHhhcCCccccCC
Q psy2083 159 TEELEENI---IENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 159 tee~e~~~---~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
..+..+. ....+|+..++|-.+...+.++.+-+.
T Consensus 379 -~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 379 -RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp -EEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred -eeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 1122221 112257777888777777777766543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.52 E-value=6e-13 Score=118.44 Aligned_cols=126 Identities=6% Similarity=0.122 Sum_probs=104.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..+..+ ..+..++|+|++..+++++.++ |+|++||+++++++....+. ..+.+++|+|++
T Consensus 59 ~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg 127 (391)
T 1l0q_A 59 IDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDG 127 (391)
T ss_dssp EETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTS
T ss_pred EECCCCeEEEEEECC--CCccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEEeCC--CCcceEEECCCC
Confidence 567789999998876 4899999999888787776654 49999999999887776554 578999999997
Q ss_pred --e-ee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE-EEEeCCCeEEEEEcCC
Q psy2083 86 --V-LS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll-~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ +.++.|++||..+++.+..+.. ...+++++|+|++..| ++++.+++|.+|++..
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 4 44 4689999999999999999987 4677999999999887 5667889999999754
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-13 Score=133.84 Aligned_cols=127 Identities=9% Similarity=0.229 Sum_probs=99.2
Q ss_pred hhcCc--eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEc
Q psy2083 8 QDKGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 8 ~~~G~--~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~ 82 (248)
..+|+ ....+.+| .+.|.+++|+|+ +..+++++.|+ +|++||++++.+. ......|..+|.++.|+
T Consensus 84 ~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg--------~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 84 EENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp EETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred CCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCCC--------cEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 34454 45555554 789999999998 66677776664 9999999988322 11222344899999999
Q ss_pred CC-------------c---eeeeCCCeEEEEECCCC----CEEEEeecCCCCCeeEEEEeCC---CCEEEEEeCCCeEEE
Q psy2083 83 DN-------------Y---VLSMDSSVVKIWSKDNG----SLFTCIESGDQTQFNNLCHIPE---SGMMFIANENKKILT 139 (248)
Q Consensus 83 ~d-------------~---l~Ssdd~~IKIWD~~tG----k~~~tie~~h~~~In~l~~~pd---sgll~sa~ed~~I~~ 139 (248)
|. + ++++.|++|++||.+++ .+..++.+ |..+|++++|+|+ +.+|++|+.|+.|.+
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 93 4 55568999999999987 56667777 6999999999999 899999999999999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|++..
T Consensus 234 wd~~~ 238 (753)
T 3jro_A 234 WTQDN 238 (753)
T ss_dssp EEESS
T ss_pred ecCCC
Confidence 99876
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=8.8e-13 Score=121.65 Aligned_cols=94 Identities=5% Similarity=0.021 Sum_probs=68.7
Q ss_pred ecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcCCc--e------------e-eeCCCeEEEEECCCCCEEEEee--
Q psy2083 49 YYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHDNY--V------------L-SMDSSVVKIWSKDNGSLFTCIE-- 109 (248)
Q Consensus 49 ~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~d~--l------------~-Ssdd~~IKIWD~~tGk~~~tie-- 109 (248)
+.|++|||||+++++.+.+.. |.+...|.+++|+|++ + + ++.|++||+||..+|+.+..+.
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 334599999999999888763 2234578888999987 3 2 2478999999999999887763
Q ss_pred --cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 110 --SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 110 --~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|...+.+.++ ++.++++++.|++|++|++..
T Consensus 280 ~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 280 LPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp CCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTT
T ss_pred ccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCC
Confidence 123444444444 488999999999999999864
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-12 Score=116.50 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=102.5
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
-+|..+|+.+..+... +.+..++|+|++..++++++.+ |.|++||+++++++....+. ..+.+++|+|+
T Consensus 287 ~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~d 355 (433)
T 3bws_A 287 IYSMDKEKLIDTIGPP--GNKRHIVSGNTENKIYVSDMCC-------SKIEVYDLKEKKVQKSIPVF--DKPNTIALSPD 355 (433)
T ss_dssp EEETTTTEEEEEEEEE--ECEEEEEECSSTTEEEEEETTT-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTT
T ss_pred EEECCCCcEEeeccCC--CCcceEEECCCCCEEEEEecCC-------CEEEEEECCCCcEEEEecCC--CCCCeEEEcCC
Confidence 3667778887777543 5788999999877776664443 49999999999887776654 78999999999
Q ss_pred c--ee-eeC---------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 85 Y--VL-SMD---------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssd---------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ ++ ++. |+.|++||..+++.+..+.. ...+++++|+|||..|++++. |++|.+|++..
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 7 33 332 46999999999999999987 578999999999999998875 99999999764
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-12 Score=118.37 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=105.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+.+..+..+ ..+..++++|++..+++++.......+.+|.|++||+++++++....|. ..+.+++|+|++
T Consensus 239 ~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g 314 (433)
T 3bws_A 239 IDRKTKLEIRKTDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTE 314 (433)
T ss_dssp EETTTTEEEEECCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSST
T ss_pred EECCCCcEEEEecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCC
Confidence 566788888887765 5689999999888887776422111122469999999999887776655 578999999987
Q ss_pred ---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---------------CCeEEEEEcCC
Q psy2083 86 ---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---------------NKKILTYYIPS 144 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---------------d~~I~~w~Ip~ 144 (248)
+++ +.++.|++||.++++.+..+.. ...+++++|+|+|..|++++. |+.|.+|++..
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CEEEEEecCCCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 344 5799999999999999988875 788999999999999998887 46999999765
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-10 Score=106.85 Aligned_cols=123 Identities=7% Similarity=0.078 Sum_probs=93.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|.....+.+| ...|.+++|+|++..++.++.++ ..++|++||++++++.....|. ..+.+++|+||+ |+
T Consensus 168 g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~-----~~~~i~~~d~~tg~~~~l~~~~--~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 168 GYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp SCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEEEECCS--SCEEEEEECTTSSEEEE
T ss_pred CCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecC-----CCcEEEEEECCCCcEEEeecCC--CcccCEEEcCCCCEEEE
Confidence 4455565554 57899999999988888777663 1248999999999887665554 689999999998 44
Q ss_pred ee-CC--CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEcC
Q psy2083 88 SM-DS--SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYIP 143 (248)
Q Consensus 88 Ss-dd--~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~Ip 143 (248)
++ .+ ..|.+||..+|+. ..+.. |...+++++|+|||..|++++. ++ +|.+|++.
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~-~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQI-RQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp EECTTSSCEEEEEETTTCCE-EECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEecCCCceEEEEECCCCCE-EeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 43 33 4599999998886 56666 4788999999999998888876 45 56666754
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=99.79 Aligned_cols=128 Identities=9% Similarity=0.064 Sum_probs=100.0
Q ss_pred cchhcCceeEEEecCCCC-CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC----CCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT-QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY----GLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~-~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~----~~pI~sI~ 80 (248)
+|..+|+.+..+..++.. .+..++++|++..+++++..+ +.|.+||+.+++.+....... +..+..++
T Consensus 16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred EECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------CeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 677789998888755222 478899999887777666553 489999999998876544321 12678999
Q ss_pred EcCCc--eeee-------------CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 81 FHDNY--VLSM-------------DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~--l~Ss-------------dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+|++ ++.+ .++.|.+||..+++.+..+.. ...+++++|+|||..|+++ ++.|.+|++..
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 99997 4444 478999999999999888886 5678899999999988888 68899999754
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.8e-10 Score=98.77 Aligned_cols=128 Identities=7% Similarity=0.122 Sum_probs=98.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~ 83 (248)
-+|..+|+....+..+ ...+ .++|+|++..+++++..+ +.|.+||+.+++. .....++ ..|+.+++|+|
T Consensus 24 ~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~ 93 (331)
T 3u4y_A 24 FFSTDTLEILNQITLG-YDFV-DTAITSDCSNVVVTSDFC-------QTLVQIETQLEPPKVVAIQEG-QSSMADVDITP 93 (331)
T ss_dssp EEETTTCCEEEEEECC-CCEE-EEEECSSSCEEEEEESTT-------CEEEEEECSSSSCEEEEEEEC-SSCCCCEEECT
T ss_pred EEeCcccceeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCC-------CeEEEEECCCCceeEEecccC-CCCccceEECC
Confidence 3677889998888765 3556 899999888777776643 3899999999886 5444332 35666699999
Q ss_pred Cc--eeeeCCC----eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCe-EEEEEcCC
Q psy2083 84 NY--VLSMDSS----VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKK-ILTYYIPS 144 (248)
Q Consensus 84 d~--l~Ssdd~----~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~-I~~w~Ip~ 144 (248)
++ ++++... .|.+||.++++.+..+.. ...+++++|+|||..|+++ ..++. |.+|++..
T Consensus 94 dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 97 5555433 999999999999998886 5667999999999866555 55577 99999864
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.5e-10 Score=99.39 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=102.4
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC--------Ce
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL--------PI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~--------pI 76 (248)
.+|..+|+.+..+..+ ..+..++++|+++.+++++..+ +.|.+||+.+++.+.......+. .+
T Consensus 73 ~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 73 RLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP 143 (353)
T ss_dssp EECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred EEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCC-------CEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence 3677889988888765 4578899999888777666653 48999999999887665432111 16
Q ss_pred eEEEEcCCc--ee-ee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 77 RDIKFHDNY--VL-SM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 77 ~sI~F~~d~--l~-Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|+|++ +. ++ +++.|.+||.++++....+.. +...+++++|+|||+.+++++.++.|.+|+...
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 889999997 33 33 478899999999999999884 256688999999999999999999999999654
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-11 Score=109.51 Aligned_cols=115 Identities=4% Similarity=0.032 Sum_probs=85.8
Q ss_pred CCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--e-eeeCCCeEE
Q psy2083 21 DQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--V-LSMDSSVVK 95 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IK 95 (248)
|.+.|.+++|+|+++. +++++.| |+|++||++++..+.. ..| ..+|++++|+|++ + +++.|++|+
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~D--------g~v~iwD~~~~~~~~~~~~~--~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLAD--------GSIAVLQVTETVKVCATLPS--TVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETT--------SCEEEEEESSSEEEEEEECG--GGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCceEEEEECCCCCCEEEEEECC--------CeEEEEEcCCCcceeeccCC--CCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 4688999999998555 5555555 4999999999865543 344 4899999999998 4 456899999
Q ss_pred EEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEe-CC------CeEEEEEcCCCC
Q psy2083 96 IWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIAN-EN------KKILTYYIPSLG 146 (248)
Q Consensus 96 IWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~-ed------~~I~~w~Ip~lG 146 (248)
+||.+ ++....+..+ |...|.+++|++++.++++.+ .+ ..+.+|+++..+
T Consensus 218 iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 218 QYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 99998 7777776541 123789999999887765433 33 238999998754
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-09 Score=94.66 Aligned_cols=131 Identities=9% Similarity=0.069 Sum_probs=101.3
Q ss_pred ccchhcCceeEEEecCCCC--------CeeEEEEeCCCCcEEEee-cCceeeeecCCeeEEEEcCCCceeEEec-CCCCC
Q psy2083 5 ELRQDKGSLFTCIESGDQT--------QFNNLCHIPESGMMFIAN-ENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGL 74 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~--------~V~~~~~~~~~g~l~~ag-~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~ 74 (248)
-+|..+|+.+..+..++.. .+..++++|+++.+++++ .++ +.|.+||+++++.+.... ++ .
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~--~ 185 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-------SVIWVVDGGNIKLKTAIQNTG--K 185 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-------CEEEEEETTTTEEEEEECCCC--T
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-------ceEEEEcCCCCceEEEecCCC--C
Confidence 3677889988888765212 268899999888777766 332 489999999998877665 33 5
Q ss_pred CeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 75 PIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.+..+.|+|++ ++++.++.|.+||..+++.+..+..+ +...+++++|+|||+.+++++.+ +.|.+|++..
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 68999999997 44456889999999999998887641 24467889999999988877765 8999999754
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.20 E-value=7.7e-10 Score=95.18 Aligned_cols=124 Identities=7% Similarity=0.085 Sum_probs=94.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC--------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-------------- 71 (248)
+|..+++....+..+ ..+..++++|++..++++ ++ .|.+||+++++++......
T Consensus 120 ~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~--~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 187 (337)
T 1pby_B 120 YDAETLSRRKAFEAP--RQITMLAWARDGSKLYGL--GR--------DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLA 187 (337)
T ss_dssp EETTTTEEEEEEECC--SSCCCEEECTTSSCEEEE--SS--------SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCC
T ss_pred EECCCCcEEEEEeCC--CCcceeEECCCCCEEEEe--CC--------eEEEEECCCCcEeeeeeccccCCCceeCCCccE
Confidence 456677777777764 467888899988777776 22 6788888777654332111
Q ss_pred ---------------------------------------------------CCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 72 ---------------------------------------------------YGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 72 ---------------------------------------------------~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
+...+.+++|+|++ +..+ ++.|.+||
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d 266 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFD 266 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEE
Confidence 11234568999997 5555 68999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+++.+..+.. ...+.+++|+|||..|++++.++.|.+|++..
T Consensus 267 ~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 267 LEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp TTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 999999998886 56788999999999999999999999999764
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.2e-09 Score=94.89 Aligned_cols=127 Identities=11% Similarity=0.154 Sum_probs=97.2
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCe-eEEEEcCCCcee-----EEecCCCCCCeeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPA-FYLYDIRADKPL-----RVKDHMYGLPIRD 78 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~-V~LwDlRs~~pl-----~~~~h~~~~pI~s 78 (248)
-+|..+|+.+..+..+ .....++++|++..+++++.++ +. |.+||+.....+ ..... +.....
T Consensus 112 v~d~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~--~~~~~~ 180 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIP--YDAVGIAISPNGNGLILIDRSS-------ANTVRRFKIDADGVLFDTGQEFISG--GTRPFN 180 (331)
T ss_dssp EEETTTTEEEEEEECC--TTEEEEEECTTSSCEEEEEETT-------TTEEEEEEECTTCCEEEEEEEEECS--SSSEEE
T ss_pred EEECCCCCeEEEEECC--CCccceEECCCCCEEEEEecCC-------CceEEEEEECCCCcEeecCCccccC--CCCccc
Confidence 3677788888888765 4678999999888777766553 36 999999865332 11222 356799
Q ss_pred EEEcCCc---eeee-CCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 79 IKFHDNY---VLSM-DSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~---l~Ss-dd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+.|+|++ ++++ .++.|.+||.++++. +..+.. ...+.+++|+|||..|++++. ++.|.+|++..
T Consensus 181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 9999997 3343 688999999999998 888886 577889999999998777764 67899999754
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.6e-10 Score=97.51 Aligned_cols=119 Identities=9% Similarity=0.144 Sum_probs=89.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCce--eEEecCCCCCCeeEEEEcCCc--e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKP--LRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~p--l~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.+..+.. ...+..++|+|++..+++++.++ |.|++||+. +++. +...... ..+..++|+|++ +
T Consensus 30 ~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 30 LTQVVDV--PGQVQPMVVSPDKRYLYVGVRPE-------FRVLAYRIAPDDGALTFAAESALP--GSLTHISTDHQGQFV 98 (343)
T ss_dssp EEEEEEC--SSCCCCEEECTTSSEEEEEETTT-------TEEEEEEECTTTCCEEEEEEEECS--SCCSEEEECTTSSEE
T ss_pred EeeeEec--CCCCceEEECCCCCEEEEeecCC-------CeEEEEEecCCCCceeeccccccC--CCCcEEEEcCCCCEE
Confidence 3444544 36788999999888788877763 489999998 5543 3333322 378999999997 4
Q ss_pred -eee-CCCeEEEEEC---CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 87 -LSM-DSSVVKIWSK---DNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 87 -~Ss-dd~~IKIWD~---~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
+++ .++.|.+||. .+++....+.. ...+++++|+|||..|++++ .+++|.+|++..
T Consensus 99 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 344 4889999999 44456666665 46789999999999888888 889999999865
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.16 E-value=8.9e-10 Score=92.21 Aligned_cols=125 Identities=8% Similarity=0.079 Sum_probs=89.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|+......+ ...|.+++|+|++..+++++ ++ .|.+||+.+ +++...........|.+++|+|+
T Consensus 27 ~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~-~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 27 FNIRTRKMRVVWQT--PELFEAPNWSPDGKYLLLNS-EG--------LLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EETTTTEEEEEEEE--SSCCEEEEECTTSSEEEEEE-TT--------EEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred EeCCCCceeeeccC--CcceEeeEECCCCCEEEEEc-CC--------eEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 45666776655553 47899999999887676654 43 899999999 87766553333467899999999
Q ss_pred c--eee-e--CCCeEEEE--ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEcCC
Q psy2083 85 Y--VLS-M--DSSVVKIW--SKDNGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~S-s--dd~~IKIW--D~~tGk~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~Ip~ 144 (248)
+ ++. + .++.++|| |..+++ ...+.. ...+++++|+|||..|+ +++.++.+.+|.+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 7 443 4 23445555 455555 455555 45699999999999776 788899999998753
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-09 Score=104.34 Aligned_cols=127 Identities=8% Similarity=0.088 Sum_probs=101.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
+|..+|+++.++..++ .+..++|+|++..+++++.++ +|++||+ .+++.+....++ ..+..|+|+|
T Consensus 164 ~D~~t~~~~~~i~~g~--~~~~v~~spdg~~l~v~~~d~--------~V~v~D~~~~t~~~~~~i~~g--~~p~~va~sp 231 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDA--------RIDMIDLWAKEPTKVAEIKIG--IEARSVESSK 231 (543)
T ss_dssp EETTTCCEEEEEECST--TEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCEEEEEEECC--SEEEEEEECC
T ss_pred EECCCceEEEEEecCc--ccceEEECCCCCEEEEECCCC--------eEEEEECcCCCCcEEEEEecC--CCcceEEeCC
Confidence 6788999999999663 388889999998899988875 9999999 788877766554 5679999999
Q ss_pred ----Cc--eee-e-CCCeEEEEECCCCCEEEEeecC---------C-CCCeeEEEEeCCCCE-EEEEeCCCeEEEEEcCC
Q psy2083 84 ----NY--VLS-M-DSSVVKIWSKDNGSLFTCIESG---------D-QTQFNNLCHIPESGM-MFIANENKKILTYYIPS 144 (248)
Q Consensus 84 ----d~--l~S-s-dd~~IKIWD~~tGk~~~tie~~---------h-~~~In~l~~~pdsgl-l~sa~ed~~I~~w~Ip~ 144 (248)
++ +.+ + .+++|+|||..+++++.++..+ | ...+.++.++|+++. +++..++++|.+|++..
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 87 443 3 5899999999999999998751 1 226889999998765 45556789999999865
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-09 Score=99.14 Aligned_cols=127 Identities=12% Similarity=0.130 Sum_probs=92.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|..+|+... +..+ .+.+..++|+|++..++ +++.++ +..|.+||++++++.....|. ..+.+++|+||
T Consensus 208 ~d~~tg~~~~-l~~~-~~~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spd 277 (415)
T 2hqs_A 208 QTLANGAVRQ-VASF-PRHNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPD 277 (415)
T ss_dssp EETTTCCEEE-EECC-SSCEEEEEECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCS--SCEEEEEECTT
T ss_pred EECCCCcEEE-eecC-CCcccCEEEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCC--CcccceEECCC
Confidence 4556677654 3443 46889999999887776 444332 236999999998775444444 78999999999
Q ss_pred c--ee-eeC-CC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEcCC
Q psy2083 85 Y--VL-SMD-SS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssd-d~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~Ip~ 144 (248)
+ |+ +++ ++ .|.+||..+|+. ..+.. +...+.+++|+|||..|++++.+ .+|.+|++..
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGGAP-QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCC-EECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CCEEEEEECCCCCcEEEEEECCCCCE-EEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 7 44 454 44 677889998874 34444 36788899999999999888764 5899998754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-10 Score=107.62 Aligned_cols=127 Identities=9% Similarity=0.069 Sum_probs=93.1
Q ss_pred cchhcCceeEEEecCCCC---CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT---QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~---~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~ 80 (248)
.|..+|+....+.++ .. .|.+++|+||+..++.++.+..+ ..++++.|.+||+.++++..... ..+...|..++
T Consensus 42 ~d~~~g~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 42 WNVETNTSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAG 120 (723)
T ss_dssp BCGGGCCCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCC
T ss_pred EECCCCcEEEEeccc-cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccE
Confidence 567788888877765 33 48999999998888877765432 23445799999999987632222 22234589999
Q ss_pred EcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------------------eEEEEeCCCCEEEEEeCC
Q psy2083 81 FHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------------------NNLCHIPESGMMFIANEN 134 (248)
Q Consensus 81 F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------------------n~l~~~pdsgll~sa~ed 134 (248)
|+||+ |+.+.++.|.+||..+|+....... +...+ ++++|+|||..|++++.+
T Consensus 121 ~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 121 WGPKGQQLIFIFENNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp BCSSTTCEEEEETTEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEECCeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 99998 6666668999999999887665554 13333 789999999999888754
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-09 Score=93.44 Aligned_cols=124 Identities=7% Similarity=0.137 Sum_probs=88.2
Q ss_pred cCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---CCceeEEecCCCCCCeeEEEEcCC
Q psy2083 10 KGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---ADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 10 ~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---s~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|+ .+..+..+ +.+..++|+|++..+++++.++ |.|.+||+. ..+++...... ..+.+++|+|+
T Consensus 71 ~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~d 139 (343)
T 1ri6_A 71 DGALTFAAESALP--GSLTHISTDHQGQFVFVGSYNA-------GNVSVTRLEDGLPVGVVDVVEGL--DGCHSANISPD 139 (343)
T ss_dssp TCCEEEEEEEECS--SCCSEEEECTTSSEEEEEETTT-------TEEEEEEEETTEEEEEEEEECCC--TTBCCCEECTT
T ss_pred CCceeeccccccC--CCCcEEEEcCCCCEEEEEecCC-------CeEEEEECCCCccccccccccCC--CCceEEEECCC
Confidence 455 44455554 3788999999888787776644 489999994 33444444332 46899999999
Q ss_pred c--ee-ee-CCCeEEEEECCC-CCEEE----EeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 85 Y--VL-SM-DSSVVKIWSKDN-GSLFT----CIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ss-dd~~IKIWD~~t-Gk~~~----tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
+ ++ ++ .++.|++||..+ |+... .+.......+++++|+|+|..+++++ .+++|.+|++..
T Consensus 140 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 140 NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 7 33 44 688999999998 76532 22321145788999999999776665 789999999864
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-10 Score=107.41 Aligned_cols=124 Identities=7% Similarity=0.023 Sum_probs=93.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|++.+....+ . .+++|+||+..++.++.+.. ..++|.+||+.++++.....|. ..+.+++|+||+
T Consensus 138 d~~~g~~~~l~~~~--~--~~~~~spDG~~la~~~~~~~----~~~~i~~~d~~~g~~~~l~~~~--~~~~~~~~SpDG~ 207 (582)
T 3o4h_A 138 ALDGGGLRELARLP--G--FGFVSDIRGDLIAGLGFFGG----GRVSLFTSNLSSGGLRVFDSGE--GSFSSASISPGMK 207 (582)
T ss_dssp EEETTEEEEEEEES--S--CEEEEEEETTEEEEEEEEET----TEEEEEEEETTTCCCEEECCSS--CEEEEEEECTTSC
T ss_pred EccCCcEEEeecCC--C--ceEEECCCCCEEEEEEEcCC----CCeEEEEEcCCCCCceEeecCC--CccccceECCCCC
Confidence 44456554444433 2 78899998888876665521 1137999999998776555554 678999999998
Q ss_pred -eeee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEE--------EeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 -VLSM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLC--------HIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 -l~Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~--------~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+++ .++ .|.+||.++|+.. .+.. |...+.+++ |+|||.++++++.++++++|.+
T Consensus 208 ~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 208 VTAGLETAREARLVTVDPRDGSVE-DLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEE-ECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEccCCCeeEEEEEcCCCCcEE-EccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 5554 566 8999999999887 5555 466777777 9999999999999999999998
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-09 Score=94.07 Aligned_cols=127 Identities=10% Similarity=0.168 Sum_probs=91.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----CCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----GLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~~pI~sI~ 80 (248)
+|..+|+.+..+..+....+..++++|++..+++++..+ +.|.+||+.+++.+......+ +..+..++
T Consensus 26 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-------~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 26 VDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-------GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp EETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred EECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-------CcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 677788988888765223678999999887676665443 489999999998776543221 23488999
Q ss_pred EcCCc--eee-eC------------CCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VLS-MD------------SSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~S-sd------------d~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++. +. ++.|.+||..+|+. +..+.. +..+.+++|+|||. +++++.+ |.+|++
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~-l~~~~~~--i~~~d~ 173 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGS-LYVAGPD--IYKMDV 173 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSC-EEEESSS--EEEECT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCc-EEEccCc--EEEEeC
Confidence 99997 443 32 48999999998543 444544 55788999999999 6665443 888886
Q ss_pred CC
Q psy2083 143 PS 144 (248)
Q Consensus 143 p~ 144 (248)
..
T Consensus 174 ~~ 175 (349)
T 1jmx_B 174 KT 175 (349)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.7e-09 Score=102.33 Aligned_cols=128 Identities=10% Similarity=0.060 Sum_probs=99.9
Q ss_pred cch--hcCceeEEEecCCCCCeeEEEEeC----CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-C-------
Q psy2083 6 LRQ--DKGSLFTCIESGDQTQFNNLCHIP----ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-M------- 71 (248)
Q Consensus 6 ~~~--~~G~~~~~~~~~~~~~V~~~~~~~----~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~------- 71 (248)
+|. .+++++.++..+ ..+..++|+| ++..+++++..+ ++|.+||..+.+++.+... +
T Consensus 205 ~D~~~~t~~~~~~i~~g--~~p~~va~sp~~~~dg~~l~v~~~~~-------~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 205 IDLWAKEPTKVAEIKIG--IEARSVESSKFKGYEDRYTIAGAYWP-------PQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp EETTSSSCEEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEES-------SEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred EECcCCCCcEEEEEecC--CCcceEEeCCCcCCCCCEEEEEEccC-------CeEEEEeccccccceeecccCcccCccc
Confidence 455 689999998865 5789999999 888888887643 4999999999998876532 1
Q ss_pred --CCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCEEE--EeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 72 --YGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSLFT--CIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 72 --~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~~~--tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
.+..+.+|.|++++ +++ .+++.|.+||..+++.+. ++.. ...+.+++|+|||.++++++ .+++|.+|+.
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~--~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA--APFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC--CSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc--CcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 12368899999975 444 478999999999877655 5654 56788999999999877665 5789999996
Q ss_pred CC
Q psy2083 143 PS 144 (248)
Q Consensus 143 p~ 144 (248)
..
T Consensus 354 ~t 355 (543)
T 1nir_A 354 KD 355 (543)
T ss_dssp TT
T ss_pred CC
Confidence 43
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-09 Score=90.70 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=74.4
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGM 127 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgl 127 (248)
+++|++||+.++++.....|. .+|.+++|+|++ ++++.++.|.+||..+ ++.......++...+++++|+|||..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES--SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCceeeeccCC--cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 469999999999877666665 789999999998 6666788999999999 88877666522468899999999999
Q ss_pred EEEEe--CCCeEEEEEcCC
Q psy2083 128 MFIAN--ENKKILTYYIPS 144 (248)
Q Consensus 128 l~sa~--ed~~I~~w~Ip~ 144 (248)
|++++ .++.+.+|.+..
T Consensus 99 l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EEEEECTTTSSCEEEEEET
T ss_pred EEEEEeCCCCcceEEEEEC
Confidence 99999 445666666543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.01 E-value=2e-09 Score=104.27 Aligned_cols=99 Identities=12% Similarity=0.165 Sum_probs=76.7
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
|..++|+||+..+++++. + +|.+||+.++ .+.....|. ..+.+++|+||+ |+.+.++.|.+||.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~--------~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-G--------ELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp SCCCEECTTSSEEEEEET-T--------EEEEEESSSCSTTSCCBCCCSS--SCEEEEEECTTSSEEEEEETTEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-C--------cEEEEECCCCCcceEEEcccCC--cccccccCCCCCCEEEEEeCCcEEEEec
Confidence 788999998887777765 3 8999999988 554444443 789999999998 66666779999999
Q ss_pred CCCCEEEEeecCCCCC----------------eeEEEEeCCCCEEEEEeCCC
Q psy2083 100 DNGSLFTCIESGDQTQ----------------FNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~----------------In~l~~~pdsgll~sa~ed~ 135 (248)
.+|+....... +... +++++|+|||..|++++.|+
T Consensus 180 ~~g~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 180 ASGRQMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTTEEEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCCEEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 98876654443 1222 47899999999999887664
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.5e-09 Score=91.73 Aligned_cols=108 Identities=6% Similarity=-0.017 Sum_probs=80.1
Q ss_pred EEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCE
Q psy2083 29 CHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSL 104 (248)
Q Consensus 29 ~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~ 104 (248)
++.+++..+++++.+ ++|.+||+.+++.+..........+..++|+|++ +++ ..++.|.+||..+|+.
T Consensus 6 ~~~~~~~~~v~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYP--------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCTTCEEEEEEETT--------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccCCCEEEEEeCCC--------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 344444334455555 3999999999988776554422357899999997 334 3688999999999999
Q ss_pred EEEeecCC-----CCCeeEEEEeCCCCEEEEEeCC------------CeEEEEEcCC
Q psy2083 105 FTCIESGD-----QTQFNNLCHIPESGMMFIANEN------------KKILTYYIPS 144 (248)
Q Consensus 105 ~~tie~~h-----~~~In~l~~~pdsgll~sa~ed------------~~I~~w~Ip~ 144 (248)
...+..++ ...+++++|+|||..|++++.+ +.|.+|++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 88887521 1237899999999999999865 8999999764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-09 Score=104.55 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=76.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKD 100 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~ 100 (248)
..|.+++|+|+ +.++.+.+ + +|++||+.++++.....+. ..+.+++|+||+ |+.+.++.|.+||..
T Consensus 82 ~~v~~~~~spd-~~~~~~~~-~--------~i~~~d~~~~~~~~l~~~~--~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQ-G--------GLVGFDMLARKVTYLFDTN--EETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEEET-T--------EEEEEETTTTEEEEEECCT--TCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEEEC-C--------EEEEEECCCCceEEccCCc--ccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 46899999998 66655543 3 8999999998876665554 679999999998 666788999999999
Q ss_pred C-----CCEEEEeecCCCCC--------------eeEEEEeCCCCEEEEEe
Q psy2083 101 N-----GSLFTCIESGDQTQ--------------FNNLCHIPESGMMFIAN 132 (248)
Q Consensus 101 t-----Gk~~~tie~~h~~~--------------In~l~~~pdsgll~sa~ 132 (248)
+ |+.......+ ... +++++|+|||..|++++
T Consensus 150 ~~~~~~g~~~~~~~~~-~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDG-TETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CTTSCCCCCEESCSCC-BTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred cccccCCCcEEeccCC-CCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 8 8876544431 222 48999999999999987
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=104.74 Aligned_cols=126 Identities=14% Similarity=0.267 Sum_probs=85.8
Q ss_pred cchhcCceeEEEecCCCC---CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT---QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~---~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F 81 (248)
.|..+|+....+.++ .. .|.++.|+||+..++.++...+. -.+.+++|++||+.+++++..... ...+.+++|
T Consensus 41 ~~~~~g~~~~~~~~~-~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~ 117 (719)
T 1z68_A 41 YNIETGQSYTILSNR-TMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCW 117 (719)
T ss_dssp EESSSCCEEEEECHH-HHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEE
T ss_pred EEcCCCcEEEEEccc-cccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceE
Confidence 455677776666653 11 38899999998877776652110 011235999999999876321111 146899999
Q ss_pred cCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCe-----------------eEEEEeCCCCEEEEEeCC
Q psy2083 82 HDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF-----------------NNLCHIPESGMMFIANEN 134 (248)
Q Consensus 82 ~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I-----------------n~l~~~pdsgll~sa~ed 134 (248)
+||+ |+.+.++.|++||..+|+.......++...| .+++|+|||..|++++.|
T Consensus 118 SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 118 SPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 9998 7777788999999999887543322112212 589999999999988755
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.98 E-value=4.4e-09 Score=101.82 Aligned_cols=117 Identities=9% Similarity=0.107 Sum_probs=87.7
Q ss_pred CCeeEEEEeCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEec-CCCC----------------------CCeeE
Q psy2083 23 TQFNNLCHIPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKD-HMYG----------------------LPIRD 78 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~----------------------~pI~s 78 (248)
..|..++|+||+..+++++. ++. ....+|.+||+.++++..... +... ..|.+
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSD---RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSC---TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCceEecCCCEEEEEeccCCC---CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 46889999999888887776 420 000189999999998765543 2222 23899
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+||+ |+.+.++.|.+||..+|+ ....+.. |...+++++|+|||..|+.+++ ++|.+|++..
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~ 181 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS 181 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEETTT
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEecCC
Confidence 9999998 666556999999999882 3445555 4688999999999999998885 5899999754
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-08 Score=87.95 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=86.2
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-C--ceeEEecCC--------CC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-D--KPLRVKDHM--------YG 73 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~--~pl~~~~h~--------~~ 73 (248)
+..+|. .+..+..+ ...+..++++|++..+++++..+ |+|.+||+.. + +++....+. ..
T Consensus 69 ~~~~g~~~~~~~~~~~-~~~p~~~a~spdg~~l~~~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 69 QIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYHK-------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp EEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred EecCCcEEEeeeeecC-CCCCEEEEECCCCCEEEEEeCCC-------CEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 343444 44443333 35788999999888888887543 4899999963 3 333333222 11
Q ss_pred CCeeEEEEcCCc-ee-e-eCCCeEEEEECC-CCCEEE--EeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 74 LPIRDIKFHDNY-VL-S-MDSSVVKIWSKD-NGSLFT--CIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 74 ~pI~sI~F~~d~-l~-S-sdd~~IKIWD~~-tGk~~~--tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
..+.+++|+|++ ++ + ..++.|.+||.. +|+... .+.......+++++|+|||..++++ ..++.|.+|++..
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 248899999998 33 3 357899999998 565432 2222113468899999999966665 4678999998753
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=7.3e-09 Score=105.58 Aligned_cols=122 Identities=10% Similarity=0.097 Sum_probs=92.7
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~ 85 (248)
+..+++. ..+. +|...+..++|+|++..+++++.++ .|++||+.+++..... .| ..+|.+++|+||+
T Consensus 365 d~~~~~~-~~l~-~~~~~~~~~~~SpDG~~la~~~~~~--------~v~~~d~~tg~~~~~~~~~--~~~v~~~~~SpDG 432 (1045)
T 1k32_A 365 DYRTGKA-EKFE-ENLGNVFAMGVDRNGKFAVVANDRF--------EIMTVDLETGKPTVIERSR--EAMITDFTISDNS 432 (1045)
T ss_dssp ETTTCCE-EECC-CCCCSEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECS--SSCCCCEEECTTS
T ss_pred ECCCCCc-eEec-CCccceeeeEECCCCCEEEEECCCC--------eEEEEECCCCceEEeccCC--CCCccceEECCCC
Confidence 3434443 3334 3357899999999888887777664 8999999998876654 44 3789999999998
Q ss_pred --eee-eCC----------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDS----------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd----------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++ +.+ +.|++||..+|+ ...+.. |...+.+++|+|||..|++++.+.....|..
T Consensus 433 ~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~-~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 433 RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC-SSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC-CCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 443 332 489999999887 666666 4778899999999999999998777666654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.95 E-value=8e-09 Score=90.67 Aligned_cols=129 Identities=12% Similarity=0.206 Sum_probs=86.9
Q ss_pred ccchhcCceeE--EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEE-ecCCCCCCeeEE
Q psy2083 5 ELRQDKGSLFT--CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRV-KDHMYGLPIRDI 79 (248)
Q Consensus 5 ~~~~~~G~~~~--~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~-~~h~~~~pI~sI 79 (248)
.+|..+|+... ..... ..+..++|+|++. +++++..+ .++.|.+||+.++.. +.. ..+ +..+..|
T Consensus 22 ~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~-l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~--~~~p~~~ 91 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAAT--QNPTYLALSAKDC-LYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAP--GTPPAYV 91 (347)
T ss_dssp EEETTTTEEEEEEEEEEC--SCCCCEEECTTCE-EEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEE--SCCCSEE
T ss_pred EEcCCCCeEEEeeeeecc--CCcceEEEccCCe-EEEEEecC-----CCceEEEEEecCCcEEEeeeeecC--CCCCEEE
Confidence 46777777543 33333 5678899999776 77665521 124899999987753 332 223 3678999
Q ss_pred EEcCCc--ee-ee-CCCeEEEEECC-CCC--EEEEeecC--------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 80 KFHDNY--VL-SM-DSSVVKIWSKD-NGS--LFTCIESG--------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 80 ~F~~d~--l~-Ss-dd~~IKIWD~~-tGk--~~~tie~~--------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|+|++ ++ ++ .++.|++||.. +|+ .+..+... +...+++++|+|||.++++...+++|.+|++.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 999997 44 34 67899999996 343 33333320 01248899999999966666678899999987
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-08 Score=87.02 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEec--CCCCCCeeEEEEcCCc--e-eee-C-CCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKD--HMYGLPIRDIKFHDNY--V-LSM-D-SSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~--h~~~~pI~sI~F~~d~--l-~Ss-d-d~~ 93 (248)
..+..++|+|++..+++++..+ ++|.+||+++++. +.... ..+......++|+||+ + ++. + ++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIG-------GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-------CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred CCCeEEEEcCCCCEEEEEcCCC-------CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 5678899999887787777543 4899999997754 22221 1112346899999998 4 344 4 589
Q ss_pred EEEEECC--CCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcC
Q psy2083 94 VKIWSKD--NGS--LFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIP 143 (248)
Q Consensus 94 IKIWD~~--tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip 143 (248)
|.+||.. +|+ .+..+.. ...+++++|+|||.+|++++ .++.|.+|.+.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999985 566 4445554 45788999999999998888 56899998763
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-08 Score=98.31 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=90.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-----CceeEEecCCCCC------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-----DKPLRVKDHMYGL------ 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-----~~pl~~~~h~~~~------ 74 (248)
.|..+|+....... ...+..++|+||+..++.+ .++ .|.+||+.+ +++..........
T Consensus 106 ~d~~~~~~~~l~~~--~~~~~~~~~SpdG~~la~~-~~~--------~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 106 FDMLARKVTYLFDT--NEETASLDFSPVGDRVAYV-RNH--------NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp EETTTTEEEEEECC--TTCCTTCEECTTSSEEEEE-ETT--------EEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred EECCCCceEEccCC--cccccCCcCCCCCCEEEEE-ECC--------eEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 35556665554443 3678899999988777664 443 899999998 7765543222111
Q ss_pred -------CeeEEEEcCCc--eee-e---------------------------------CCCeEEEEECCCCCEEEEeec-
Q psy2083 75 -------PIRDIKFHDNY--VLS-M---------------------------------DSSVVKIWSKDNGSLFTCIES- 110 (248)
Q Consensus 75 -------pI~sI~F~~d~--l~S-s---------------------------------dd~~IKIWD~~tGk~~~tie~- 110 (248)
.+.++.|+||+ |+. + .+..|.+||..+|+......+
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 15899999998 443 3 236799999999886544432
Q ss_pred CCCCCeeEEEEeCCCCEEEEEeCCC-----eEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIANENK-----KILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa~ed~-----~I~~w~Ip~ 144 (248)
.|...+.+++|+|||..|++++.++ +|.+|++..
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 2356799999999999998887665 899998754
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-08 Score=86.19 Aligned_cols=112 Identities=10% Similarity=0.185 Sum_probs=78.7
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------e------EEecCCCCCCeeEEEEcCCc--e-eee
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------L------RVKDHMYGLPIRDIKFHDNY--V-LSM 89 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l------~~~~h~~~~pI~sI~F~~d~--l-~Ss 89 (248)
+..++|+|++..+++++..+ +.|.+||+..... + .......+.....++|+|++ + +++
T Consensus 157 ~~~~~~spdg~~l~~~~~~~-------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGT-------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp EEEEEECTTSSEEEEEETTT-------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCCEEEEEeCCC-------CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 46789999887777665533 3899999886431 1 11122223567899999997 3 344
Q ss_pred -CCCeEEEEECCCCCE--EEEeec--CCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcC
Q psy2083 90 -DSSVVKIWSKDNGSL--FTCIES--GDQTQFNNLCHIPESGMMFIANEN--KKILTYYIP 143 (248)
Q Consensus 90 -dd~~IKIWD~~tGk~--~~tie~--~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip 143 (248)
.++.|.+||..+|+. +..+.. .+...+++++|+|||..|++++.+ +.|.+|++.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 588999999998754 333332 113456799999999998887765 899999985
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-07 Score=84.06 Aligned_cols=130 Identities=7% Similarity=0.115 Sum_probs=96.5
Q ss_pred cchhcCceeEEEecCC---------CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCC
Q psy2083 6 LRQDKGSLFTCIESGD---------QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLP 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~---------~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~p 75 (248)
++ .+|+.+..+.... -.....+++.|++|.++++...+ +.|++||..+++.+... ...++..
T Consensus 171 ~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-------~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 171 FS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-------GRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp EC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEECCTTTTTC
T ss_pred Ec-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-------CEEEEEECCCCcEEEEEeccccCCC
Confidence 45 3677777775321 12378999999877777776554 48999999988877664 2344577
Q ss_pred eeEEEEcCC------c---eeeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 76 IRDIKFHDN------Y---VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 76 I~sI~F~~d------~---l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.+++|+|. + +..+.+..|++||..+|+.+.++.+ .+...+++++++|||.++++...+++|..|++.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 889999993 2 2223456899999999999999852 135678999999999888888888999999864
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=4.9e-08 Score=87.34 Aligned_cols=130 Identities=13% Similarity=0.136 Sum_probs=89.6
Q ss_pred ccchhcCcee--EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeEEecCCCCCCeeEEEE
Q psy2083 5 ELRQDKGSLF--TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 5 ~~~~~~G~~~--~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~~~~h~~~~pI~sI~F 81 (248)
++|..+|++- ..........+..++++|++..+++++.+ +|.+||+. +++......+..+.....++|
T Consensus 20 ~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~---------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~ 90 (365)
T 1jof_A 20 QFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK---------KWSSFAVKSPTEIVHEASHPIGGHPRANDA 90 (365)
T ss_dssp EEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT---------EEEEEEEEETTEEEEEEEEECCSSGGGGCT
T ss_pred EEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc---------eEEEEEECCCCCEEEeeEeecCCCCccEEE
Confidence 4677778753 23322213467889999988778777665 69999997 776654333211123567999
Q ss_pred cCCc----eeee--------------CCCeEEEEECC-CCCEEEEeec---CCCCCeeEEEEeCCCCEEEEEeC-CCeEE
Q psy2083 82 HDNY----VLSM--------------DSSVVKIWSKD-NGSLFTCIES---GDQTQFNNLCHIPESGMMFIANE-NKKIL 138 (248)
Q Consensus 82 ~~d~----l~Ss--------------dd~~IKIWD~~-tGk~~~tie~---~h~~~In~l~~~pdsgll~sa~e-d~~I~ 138 (248)
+|++ +.++ .++.+++|+.. +|+....+.. .+...+++++|+|||..|++++. +.+|.
T Consensus 91 spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 9987 2233 57899999997 5776555441 12567899999999998888764 57999
Q ss_pred EEEcC
Q psy2083 139 TYYIP 143 (248)
Q Consensus 139 ~w~Ip 143 (248)
+|++.
T Consensus 171 ~~~~~ 175 (365)
T 1jof_A 171 THRKL 175 (365)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.3e-08 Score=101.88 Aligned_cols=109 Identities=12% Similarity=0.092 Sum_probs=86.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeE-EEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFY-LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~-LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~ 99 (248)
.+..++|+ ++..++.++.+. .+. +||+.++++..... +...+..++|+||+ |+ +++++.|++||.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~--------~l~~~~d~~~~~~~~l~~--~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREG--------DFLGIYDYRTGKAEKFEE--NLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTE--------EEEEEEETTTCCEEECCC--CCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEeeeEc-CCCeEEEEECCC--------ceEEEEECCCCCceEecC--CccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 67778888 766677766653 788 99999876544443 34789999999998 44 467889999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC----------eEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK----------KILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~----------~I~~w~Ip~ 144 (248)
.+|+....+.+ |...+.+++|+|||..|++++.++ .|.+|++..
T Consensus 408 ~tg~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 408 ETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp TTCCEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99998887766 588899999999999998887644 899999753
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=97.82 Aligned_cols=137 Identities=9% Similarity=0.107 Sum_probs=92.5
Q ss_pred cchhcCceeEEEecCCCC----CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT----QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~----~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
.|..+|++...+.++... ..++..++||+..++.++.+..+ -.++.|.+.|||+.+++......|. ..+..++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~--~~~~~~~ 118 (740)
T 4a5s_A 41 FNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP--NNTQWVT 118 (740)
T ss_dssp EETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--TTEEEEE
T ss_pred EECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC--CcceeeE
Confidence 567788887777765311 12347889988877777665322 1223357789999999765544443 6799999
Q ss_pred EcCCc--eeeeCCCeEEEEECCCCCEEEE-eecCCCCCe-----------------eEEEEeCCCCEEEEEeCC-CeEEE
Q psy2083 81 FHDNY--VLSMDSSVVKIWSKDNGSLFTC-IESGDQTQF-----------------NNLCHIPESGMMFIANEN-KKILT 139 (248)
Q Consensus 81 F~~d~--l~Ssdd~~IKIWD~~tGk~~~t-ie~~h~~~I-----------------n~l~~~pdsgll~sa~ed-~~I~~ 139 (248)
|+||+ |+.+.++.|.+||..+|+.... ..+ +...+ ..+.|+|||..|+.++.| +.+..
T Consensus 119 ~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g-~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~ 197 (740)
T 4a5s_A 119 WSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTG-KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPL 197 (740)
T ss_dssp ECSSTTCEEEEETTEEEEESSTTSCCEECCSCC-BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCE
T ss_pred ECCCCCEEEEEECCeEEEEECCCCceEEEcCCC-CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCce
Confidence 99998 7767788999999998875432 122 12222 348999999988887644 44666
Q ss_pred EEcCCC
Q psy2083 140 YYIPSL 145 (248)
Q Consensus 140 w~Ip~l 145 (248)
|.+|..
T Consensus 198 ~~~~~~ 203 (740)
T 4a5s_A 198 IEYSFY 203 (740)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 666543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.77 E-value=5.7e-09 Score=100.58 Aligned_cols=110 Identities=6% Similarity=0.086 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC---CeeEEEEcCCc--eee-eCC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL---PIRDIKFHDNY--VLS-MDS----- 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~---pI~sI~F~~d~--l~S-sdd----- 91 (248)
..+.++.|+||+.++++ +.+ |+|++||+.+++......+. .. .|.+++|+||+ |++ +++
T Consensus 17 ~~~~~~~~spdg~~~~~-~~d--------g~i~~~d~~~g~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQK--------GTVRLWNVETNTSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSS--------SCEEEBCGGGCCCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred ccccccEEcCCCcEEEE-eCC--------CCEEEEECCCCcEEEEeccc-cccccccceEEECCCCCEEEEEecCcccee
Confidence 34678889998775543 444 49999999999876665432 22 59999999998 544 343
Q ss_pred ----CeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 ----SVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ----~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|.+||..+|+. ..+.. +|...+++++|+|||..|+.++. ++|.+|++..
T Consensus 87 ~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp SCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred ecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 6788999999986 34432 12345889999999999999886 7899998754
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.75 E-value=7.3e-07 Score=76.06 Aligned_cols=131 Identities=13% Similarity=0.242 Sum_probs=87.8
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~ 83 (248)
++. +|+.+..+.. .+...+..+++.|++. ++++...+ +.|++||.. ++.+.... ++.-..+..|+|++
T Consensus 147 ~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~ 216 (286)
T 1q7f_A 147 FDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRA-------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS 216 (286)
T ss_dssp ECT-TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGG-------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECT
T ss_pred EcC-CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCC-------CEEEEEcCC-CCEEEEEccCCccCCCcEEEECC
Confidence 443 4666776652 2235678888888654 55554432 389999984 44444442 22224678999999
Q ss_pred Cc--eee-eCCC-eEEEEECCCCCEEEEeecCC-CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 84 NY--VLS-MDSS-VVKIWSKDNGSLFTCIESGD-QTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 84 d~--l~S-sdd~-~IKIWD~~tGk~~~tie~~h-~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++ +++ ..++ .|.+||. +|+.+.++..+. ...+.++++.|+|.++++ +.+++|.+|.+....|.
T Consensus 217 ~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 217 NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 87 333 3454 9999996 588888887521 124779999999986666 67999999998765553
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.6e-08 Score=97.78 Aligned_cols=107 Identities=14% Similarity=0.172 Sum_probs=78.3
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC--CCeeEEEEcCCc--eee-eC---------C
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG--LPIRDIKFHDNY--VLS-MD---------S 91 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~--~pI~sI~F~~d~--l~S-sd---------d 91 (248)
.++.|+|++. ++.++.+ |+|++||+.++++.....+... ..|.+++|+||+ |+. ++ +
T Consensus 19 ~~~~~s~dg~-~~~~~~d--------~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWISGQE-YLHQSAD--------NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESSSSE-EEEECTT--------SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CccEECCCCe-EEEEcCC--------CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 3678888774 4444444 4899999999987766543210 248999999998 443 34 5
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|++||..+|+.+....- ...+++++|+|||..|+.+. +++|.+|++..
T Consensus 90 ~~i~~~d~~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EEEEEEETTTTEECCSSCC--CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred eEEEEEECCCCccccceec--CcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 8999999999876322222 34688999999999999886 67999998753
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.73 E-value=5.8e-07 Score=80.27 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=79.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeE--Eec-CCCCCCeeEEEEcCCc--ee-ee-CCCe
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLR--VKD-HMYGLPIRDIKFHDNY--VL-SM-DSSV 93 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~--~~~-h~~~~pI~sI~F~~d~--l~-Ss-dd~~ 93 (248)
...+..++|+|++..+++++..+ +.|.+||+. +++... ... ..++..+..++|+|++ +. ++ .++.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~-------~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~ 216 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTA-------NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR 216 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCcceEEEECCCCCEEEEEcCCC-------CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe
Confidence 36788999999887777665432 389999998 675432 221 1124668999999998 33 33 4789
Q ss_pred EEEEECC--CCCEE---EEeec---C---CCC------CeeEEE-EeCCCCEEEEEeCCC------eEEEEEcC
Q psy2083 94 VKIWSKD--NGSLF---TCIES---G---DQT------QFNNLC-HIPESGMMFIANENK------KILTYYIP 143 (248)
Q Consensus 94 IKIWD~~--tGk~~---~tie~---~---h~~------~In~l~-~~pdsgll~sa~ed~------~I~~w~Ip 143 (248)
|.+|+.+ +|+.. ..+.. + |.. .+.+++ |+|||..|++++.+. +|.+|++.
T Consensus 217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 9999765 67753 22321 0 011 488999 999999988887543 89999985
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-07 Score=89.64 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=78.5
Q ss_pred eeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCC----CeEEE
Q psy2083 25 FNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDS----SVVKI 96 (248)
Q Consensus 25 V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd----~~IKI 96 (248)
+...+++|++.. +++++.++ .+.|||+.++++.....+. . .++.|+||+ |+ ++++ ..|.+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~~~~l~~~~--~--~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATED--------RVALYALDGGGLRELARLP--G--FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSS--------CEEEEEEETTEEEEEEEES--S--CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ceeeeeCCCCCeEEEEecCCC--------CceEEEccCCcEEEeecCC--C--ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 445677877654 44555544 4559999998776655433 2 899999998 54 4444 78999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC--eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK--KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~--~I~~w~Ip 143 (248)
||..+|+.. .+.. |...+++++|+|||..|+++..++ +|.+|++.
T Consensus 180 ~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 180 SNLSSGGLR-VFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp EETTTCCCE-EECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred EcCCCCCce-Eeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 999988865 6665 478899999999999999888888 88888864
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-06 Score=74.24 Aligned_cols=125 Identities=9% Similarity=0.056 Sum_probs=88.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d 84 (248)
++ .+|+.+..+...+...+..+++.|++. ++.+...+ +.|.+||.. ++.+..... .....++.|+|+++
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKV-------MRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEEECTTTCSSEEEEEECSS
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCC-------CEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCC
Confidence 45 467777777654345788888888664 55544332 389999964 455544432 22245899999998
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCC-eEEEEE
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENK-KILTYY 141 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~-~I~~w~ 141 (248)
+ +++ +.++.|++||. +|+.+.++... +...++++++.|+|.++++...++ .|.+|+
T Consensus 175 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp SEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred CCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 7 333 45889999998 47777777641 125788999999998888887776 999997
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-07 Score=89.36 Aligned_cols=119 Identities=8% Similarity=0.060 Sum_probs=80.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCC------CceeEEe-cCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRA------DKPLRVK-DHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs------~~pl~~~-~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
...+..++|+||+..++.++.+..- ......+|.+||+.+ +.+.... .+. ..+..+.|+||+ |+ ++
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEE
Confidence 4567899999998888877655100 000113899999998 6554433 332 578889999998 44 34
Q ss_pred -CC-------CeEEEEECC-CCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 90 -DS-------SVVKIWSKD-NGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 90 -dd-------~~IKIWD~~-tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+. ..|.+||.. +|+ ....+..++...+.+++|+|||.++++++.++...+|-+
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 32 479999999 572 333444323678999999999998888888884444443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.58 E-value=8.3e-07 Score=82.51 Aligned_cols=102 Identities=10% Similarity=0.158 Sum_probs=77.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKD 100 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~ 100 (248)
.+ |+.++| ++.+|+++ .+ |.|++||+++-..... .+.+..+|.++.+.+.. ++...|+.|.+||..
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~--------~~l~v~dv~sl~~~~~-~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TR--------NALYSLDLEELSEFRT-VTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR 154 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ES--------SEEEEEESSSTTCEEE-EEECSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred CC-eeEEEE--CCCEEEEE-cC--------CcEEEEEchhhhccCc-cceeecceeeEEecCCCEEEEECCCCEEEEEcc
Confidence 35 888888 56666665 44 3899999998653222 12334789999988766 555789999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.... + ...|+++||+|+| +++|..|+++.+|..+
T Consensus 155 ~~~~~~-~----~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 155 TKSTKQ-L----AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp TCCEEE-E----EESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred CCcccc-c----cCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence 888753 2 3579999999999 6789999999999654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=3.5e-06 Score=74.32 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=89.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecC--------CCCCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDH--------MYGLP 75 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h--------~~~~p 75 (248)
.+|..+|+++..+..++-.....+++.|++. ++++...+ +.|++||..... .+..... .+-..
T Consensus 73 ~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~-------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 73 VIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVAL-------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp EECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETTT-------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS
T ss_pred EEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECCC-------CEEEEEeCCCCeEEEEEecccCCCCCCccccCC
Confidence 4677789988887755456788999998666 55444432 389999986542 4554421 11235
Q ss_pred eeEEEEcC-Cc--eee-e-CCCeEEEEECCCCCEEEEeecC---------CCCCeeEEEEeCC-CCEEEEEeCCCeEEEE
Q psy2083 76 IRDIKFHD-NY--VLS-M-DSSVVKIWSKDNGSLFTCIESG---------DQTQFNNLCHIPE-SGMMFIANENKKILTY 140 (248)
Q Consensus 76 I~sI~F~~-d~--l~S-s-dd~~IKIWD~~tGk~~~tie~~---------h~~~In~l~~~pd-sgll~sa~ed~~I~~w 140 (248)
.+.|+|+| ++ +++ + .++.|++|| .+|+.+..+... +-..++++++.|+ +.++++...+++|.+|
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 78999999 55 333 3 478999999 568888887531 0123889999999 5555555677899999
Q ss_pred EcC
Q psy2083 141 YIP 143 (248)
Q Consensus 141 ~Ip 143 (248)
+..
T Consensus 224 ~~~ 226 (329)
T 3fvz_A 224 KTD 226 (329)
T ss_dssp ETT
T ss_pred ECC
Confidence 864
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.49 E-value=5.2e-06 Score=71.33 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=73.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCce---eEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKP---LRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~p---l~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKI 96 (248)
....+.++++|++..+ .+...+ +.|.+||+. .++. .... ......+..|+|++++ +..+.++.|.+
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~~~-------~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~~~v~~ 241 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDTGD-------NATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASAGDGVHV 241 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEETTT-------TEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEETTEEEE
T ss_pred CCCCccEEECCCCCEE-EEeCCC-------CeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEcCCeEEE
Confidence 3567899999987767 443332 389999997 4443 2223 2223456789999998 33333889999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEE-eCCCCEEEEEeCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCH-IPESGMMFIANENK 135 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~-~pdsgll~sa~ed~ 135 (248)
||.+ |+.+..+.. +.. +++++| .||++.|++++.++
T Consensus 242 ~~~~-g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 242 LTPD-GDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp ECTT-SCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETTE
T ss_pred ECCC-CCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCCe
Confidence 9997 899988886 244 999999 58999999998764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.47 E-value=7.4e-07 Score=87.44 Aligned_cols=109 Identities=11% Similarity=0.177 Sum_probs=78.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCC-CC--CeeEEEEcCCc--ee-eeCC----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMY-GL--PIRDIKFHDNY--VL-SMDS---- 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~-~~--pI~sI~F~~d~--l~-Ssdd---- 91 (248)
....++.|+|++.++++ + ++ +|++||+.++++.... .|.. .. ..+++.|+||+ |+ ++++
T Consensus 17 ~~~~~~~w~~dg~~~~~-~-~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYK-Q-EN--------NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCCEEECSSSEEEEE-E-TT--------EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred ccccccEECCCCcEEEE-c-CC--------cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 34668899998755544 3 53 8999999999875554 2321 11 23558999998 44 4454
Q ss_pred -----CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 -----SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 -----~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.+.|||..+|+.. .+.. |...+..++|+|||..|+.+. ++.|.+|++..
T Consensus 87 r~~~~~~~~~~d~~~~~~~-~l~~-~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLI-TEER-IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPN 141 (740)
T ss_dssp SSCEEEEEEEEETTTTEEC-CSSC-CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred EEccceEEEEEECCCCcEE-Eccc-CCCcceeeEECCCCCEEEEEE-CCeEEEEECCC
Confidence 45679999998754 4555 477899999999999998885 67899998653
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-06 Score=74.51 Aligned_cols=99 Identities=9% Similarity=0.046 Sum_probs=76.7
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGD 112 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h 112 (248)
+..+++++.++ .|.+||..+++.++.+.-.....++++.++|++ ++-+.++.|..||. +|+.+..+..++
T Consensus 5 ~~~lv~~~~~~--------~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 5 QHLLVGGSGWN--------KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CEEEEECTTCS--------EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCT
T ss_pred CcEEEeeCCCC--------EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCC
Confidence 45555555554 899999999999888753322468999999998 44366788999999 899999998722
Q ss_pred CCCeeEEEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 113 QTQFNNLCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
...++++.+.|||+++++.+. +++|..++
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 358899999999999999887 66666554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.45 E-value=5e-06 Score=73.67 Aligned_cols=128 Identities=7% Similarity=-0.008 Sum_probs=91.8
Q ss_pred ccchhcCceeEEEecCC----CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 5 ELRQDKGSLFTCIESGD----QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~----~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
.+|..++++...+..+. ......+++ +++.+++++.. .+++|.+||+.+++.+.....+ .....+.
T Consensus 109 ~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g--~~p~~i~ 178 (328)
T 3dsm_A 109 IINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS------YQNRILKIDTETDKVVDELTIG--IQPTSLV 178 (328)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT------TCCEEEEEETTTTEEEEEEECS--SCBCCCE
T ss_pred EEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcC--CCccceE
Confidence 47888888888877541 014556666 46667766531 0248999999999876665433 3457899
Q ss_pred EcCCc--eeee-CC----------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 81 FHDNY--VLSM-DS----------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~--l~Ss-dd----------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++++ .+++ .+ +.|.+||..+++...++........+.++++||++.|++++. .|.+|+...
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEA 253 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTC
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCC
Confidence 99987 3333 33 689999999999888876411236899999999999999876 888988754
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8.6e-06 Score=78.84 Aligned_cols=126 Identities=7% Similarity=-0.009 Sum_probs=94.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCceeEEecCCCCCCeeEEEEc-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKPLRVKDHMYGLPIRDIKFH- 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~pl~~~~h~~~~pI~sI~F~- 82 (248)
+|..+++.+..+..+ ..+..+.++||+.++++++.++ .|.+||+. +.+.+.....+ ..-..+.|+
T Consensus 182 iD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg--------~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s~ 249 (567)
T 1qks_A 182 IDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDG--------KVNMIDLWMKEPTTVAEIKIG--SEARSIETSK 249 (567)
T ss_dssp EETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCCEEEEEECC--SEEEEEEECC
T ss_pred EECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCC--------eEEEEECCCCCCcEeEEEecC--CCCceeEEcc
Confidence 788899999999876 4677899999988888887664 89999996 77666554433 345799999
Q ss_pred ---CCc---eee-eCCCeEEEEECCCCCEEEEeecC---------CCC--------------------------------
Q psy2083 83 ---DNY---VLS-MDSSVVKIWSKDNGSLFTCIESG---------DQT-------------------------------- 114 (248)
Q Consensus 83 ---~d~---l~S-sdd~~IKIWD~~tGk~~~tie~~---------h~~-------------------------------- 114 (248)
||+ +++ -.+++|.|+|..+++++.++... |+.
T Consensus 250 ~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp STTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred ccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 587 333 36899999999999988876531 000
Q ss_pred -------------CeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 115 -------------QFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 115 -------------~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
...++.|+|||.++++++. +.+|.+++..
T Consensus 330 ~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 330 LNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp SSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred CccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 1236789999998888774 5789888854
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.7e-06 Score=73.20 Aligned_cols=110 Identities=9% Similarity=0.151 Sum_probs=77.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee-C---------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM-D--------- 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss-d--------- 90 (248)
.+...+|+||+..++.++.+.. .....|.+||+.++++.....+. . +..+.|+||+ |+ ++ +
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~---~~~~~l~~~~~~~g~~~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEE---KKVSEIWVADLETLSSKKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETT---TTEEEEEEEETTTTEEEEEEEES--E-EEEEEECTTSSEEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccC---CCcceEEEEECCCCceEEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 4677899998887776554310 00125888899988776655443 3 8999999997 33 33 2
Q ss_pred -----------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC-------eEEEEEcC
Q psy2083 91 -----------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-------KILTYYIP 143 (248)
Q Consensus 91 -----------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~-------~I~~w~Ip 143 (248)
...|.+||..+|+.+..+.. . .+.+++|+||| ++++++.+. ...+|.+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 25799999998887566766 4 78899999999 888887652 45666654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.45 E-value=5.2e-06 Score=73.51 Aligned_cols=127 Identities=6% Similarity=-0.033 Sum_probs=92.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC----CCeeEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG----LPIRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~----~pI~sI~ 80 (248)
-+|+.+|+.+.++... .....+++++++ .++++...+ +.|.+||+.+++......-+.+ .....++
T Consensus 68 viD~~t~~~~~~i~~~--~~p~~i~~~~~g-~lyv~~~~~-------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 68 AIDINTFKEVGRITGF--TSPRYIHFLSDE-KAYVTQIWD-------YRIFIINPKTYEITGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp EEETTTCCEEEEEECC--SSEEEEEEEETT-EEEEEEBSC-------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred EEECcccEEEEEcCCC--CCCcEEEEeCCC-eEEEEECCC-------CeEEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence 3688899999998754 567888887865 666666332 3899999999876654432210 1446777
Q ss_pred EcCCc-eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC----------CeEEEEEcC
Q psy2083 81 FHDNY-VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN----------KKILTYYIP 143 (248)
Q Consensus 81 F~~d~-l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed----------~~I~~w~Ip 143 (248)
+.... .++. .++.|.+||..+++.+.++.. ....+++++.|+|.+++++..+ +.|.+++..
T Consensus 138 ~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 138 QYGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 74333 3333 478999999999999999986 4567889999999977776654 688888854
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.3e-06 Score=74.50 Aligned_cols=125 Identities=7% Similarity=0.015 Sum_probs=83.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE--EcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK--FHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~--F~~ 83 (248)
+|..+|+......++ ...+...+|+||+..++.++.+. .|.+||+.++++....... ...+.... +++
T Consensus 65 ~d~~~g~~~~lt~~~-~~~~~~~~~spdg~~l~~~~~~~--------~l~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~ 134 (388)
T 3pe7_A 65 LDLNTQVATQLTEGR-GDNTFGGFLSPDDDALFYVKDGR--------NLMRVDLATLEENVVYQVP-AEWVGYGTWVANS 134 (388)
T ss_dssp EETTTCEEEECCCSS-CBCSSSCEECTTSSEEEEEETTT--------EEEEEETTTCCEEEEEECC-TTEEEEEEEEECT
T ss_pred EeCCCCceEEeeeCC-CCCccceEEcCCCCEEEEEeCCC--------eEEEEECCCCcceeeeech-hhcccccceeECC
Confidence 345556655544443 33444678999888888777664 8999999999765543221 23344444 377
Q ss_pred Cc--eee-----------------------eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCC--
Q psy2083 84 NY--VLS-----------------------MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENK-- 135 (248)
Q Consensus 84 d~--l~S-----------------------sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~-- 135 (248)
++ +++ ..+..|.+||..+|+....... ...+++++|+| ||+.|+.+.+++
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~ 212 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE--NQWLGHPIYRPYDDSTVAFCHEGPHD 212 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--CccccccEECCCCCCEEEEEEecCCC
Confidence 76 331 1346799999999986555444 67899999999 999888777643
Q ss_pred ----eEEEEEc
Q psy2083 136 ----KILTYYI 142 (248)
Q Consensus 136 ----~I~~w~I 142 (248)
.|.++++
T Consensus 213 ~~~~~l~~~d~ 223 (388)
T 3pe7_A 213 LVDARMWLINE 223 (388)
T ss_dssp TSSCSEEEEET
T ss_pred CCcceEEEEeC
Confidence 5666654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.2e-06 Score=72.00 Aligned_cols=128 Identities=9% Similarity=0.135 Sum_probs=94.8
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-----CCCCee
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-----YGLPIR 77 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-----~~~pI~ 77 (248)
.+++|+ +|+++-.+..++...+.++.+.+++..+++.+.+. +.|..+|. .++.++...-. .-.+..
T Consensus 58 V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~-------~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 58 AKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP-------STILEVNM-KGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp EEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTT-------EEEEEECT-TSCEEEEEEECCSCSSGGGSCS
T ss_pred EEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCC-------CEEEEEeC-CCCEEEEEeccCCCCccccccc
Confidence 357888 89999998875345788888889887777766622 26777775 66666554211 012456
Q ss_pred EEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+.+.+++ +++ ..++.|..||.+ |+.+.++.. ...+.++.+.|+|.++++++.+++|..++.
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 67888887 444 468899999998 999999987 456778899999999999988888988863
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-05 Score=69.60 Aligned_cols=131 Identities=8% Similarity=0.040 Sum_probs=82.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
+|..+|+.......+ ...+..+++.|++.+++++..+. ...+.|.+||..+++..... ....+..++++.|+|+
T Consensus 71 ~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 71 INPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp ECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred EeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 566667665554332 36788999888765444443330 01137999999887654222 2223467999999999
Q ss_pred c--eeeeC-------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 85 Y--VLSMD-------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 85 ~--l~Ssd-------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
+ ++++. .+.|-.||.++++....... ...++.++|+|||..|+++ +.++.|..|++.
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 8 33432 24555666665555433333 4568899999999865554 567899999874
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.41 E-value=2.5e-06 Score=76.95 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred EEEeCCCCcEEEeec-Cceeeee---cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 28 LCHIPESGMMFIANE-NKKILTY---YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~-d~~~~~~---~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
++|+|+++.++++++ +.. .++ ..++|.+||+.+++.+....-+ . ..+|+|+|++ +.+++.+.|.+||..+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v~~i~~~--~-p~~ia~spdg~~l~v~n~~~v~v~D~~t 334 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRVARIPGR--D-ALSMTIDQQRNLMLTLDGGNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEEEEEECT--T-CCEEEEETTTTEEEEECSSCEEEEECSS
T ss_pred EEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEEEEEecC--C-eeEEEECCCCCEEEEeCCCeEEEEECCC
Confidence 677888787777654 110 000 1248999999999888775433 3 8999999998 5555459999999999
Q ss_pred C--CEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 102 G--SLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 102 G--k~~~tie~~h~~~In~l~~~pdsg 126 (248)
| +.+.++.+ .....+.++++|||+
T Consensus 335 ~~l~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 PEPKLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp SSCEEEEEETT-SCSSEEEEEECCCSC
T ss_pred CcceeeEEecc-CCCCcEEEEecCCCC
Confidence 9 99999854 256788999999987
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.5e-06 Score=83.16 Aligned_cols=116 Identities=3% Similarity=-0.008 Sum_probs=79.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCe-------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSV------- 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~------- 93 (248)
.+..++|+||+..++.+.+++ |+...+|++||+.+++.+...... ..+.+++|+||+ +.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~---G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSAS---GSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEET---TCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred EEEEEEECCCCCEEEEEEcCC---CCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 477889999888776554443 111238999999999876533222 236789999997 44555444
Q ss_pred ---------EEEEECCCCCE--EEEeec-CCCCCeeEEEEeCCCCEEEEEeC-----CCeEEEEEcCC
Q psy2083 94 ---------VKIWSKDNGSL--FTCIES-GDQTQFNNLCHIPESGMMFIANE-----NKKILTYYIPS 144 (248)
Q Consensus 94 ---------IKIWD~~tGk~--~~tie~-~h~~~In~l~~~pdsgll~sa~e-----d~~I~~w~Ip~ 144 (248)
|.+|++.+++. ...++. .|...+.+++|+|||+.|+.++. +..|.+|++..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 99999998762 222232 12445778999999998888765 56788888753
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.40 E-value=5.2e-06 Score=74.83 Aligned_cols=132 Identities=5% Similarity=-0.034 Sum_probs=85.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCce--eeeecCCeeEEEEcCCCceeEEecCC-----CCCCee
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK--ILTYYIPAFYLYDIRADKPLRVKDHM-----YGLPIR 77 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~--~~~~~~G~V~LwDlRs~~pl~~~~h~-----~~~pI~ 77 (248)
.+|..+|+.+..+..+ ... .++++||+..+++++.... .-|..+++|.+||+.+.+++....-. .+....
T Consensus 35 v~D~~t~~~~~~i~~g-~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~ 111 (361)
T 2oiz_A 35 VYDYTNGKFLGMVPTA-FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG 111 (361)
T ss_dssp EEETTTCCEEEEEECC-EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG
T ss_pred EEECCCCeEEEEecCC-CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc
Confidence 4678899999998876 233 8999999888888763100 00001248999999998877654211 124567
Q ss_pred EEEEcCCc--ee-ee-C-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VL-SM-D-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~-Ss-d-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
.+.|+|++ +. +. . ++.|.+||..+++.+.+ +.. ... ..+.+.|++ ..+++.+.|+++..|.+
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGC-WSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 89999998 43 33 3 68999999999999888 654 211 123455554 34445555555555543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=5e-06 Score=73.32 Aligned_cols=117 Identities=7% Similarity=0.010 Sum_probs=80.2
Q ss_pred cchhcCceeEEEecCCCCCeeE-----EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNN-----LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~-----~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
++..+|..++.+..+ ...+.. .+|+||+..++.++..++ ...|.+||+.++++..... .++..+..+.
T Consensus 15 ~~~~~g~~~~~lt~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~g-----~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~ 87 (388)
T 3pe7_A 15 QDASTGAQVTRLTPP-DVTCHRNYFYQKCFTRDGSKLLFGGAFDG-----PWNYYLLDLNTQVATQLTE-GRGDNTFGGF 87 (388)
T ss_dssp ECTTTCCEEEECSCT-TSCEECCCTTSCCBCTTSCEEEEEECTTS-----SCEEEEEETTTCEEEECCC-SSCBCSSSCE
T ss_pred ecCCCCcceEEecCC-cccccchhhcCccCCCCCCEEEEEEcCCC-----CceEEEEeCCCCceEEeee-CCCCCccceE
Confidence 356678888777655 344444 778998887777766331 1258889999987765543 3345566788
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEE--EEeCCCCEEEE
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNL--CHIPESGMMFI 130 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l--~~~pdsgll~s 130 (248)
|+||+ |+ ++.++.|.+||..+|+....++. +...+... .++||+.+++.
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeecc
Confidence 99998 44 45678999999999987766665 23444333 34899988774
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.36 E-value=2e-06 Score=83.71 Aligned_cols=115 Identities=9% Similarity=0.032 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCe------
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSV------ 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~------ 93 (248)
..+..+.|+||+..++.+.+.+ |+.+.+|++||+.+++++. .++..+....+++|+||+ + .++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~---G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPN---AADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEET---TCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred EEEEEEEECCCCCEEEEEECCC---CCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 3577889999887766433321 1223589999999998751 122211223689999997 4 4455554
Q ss_pred -------EEEEECCCCC----EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC--eEEEEEc
Q psy2083 94 -------VKIWSKDNGS----LFTCIESGDQTQFNNLCHIPESGMMFIANENK--KILTYYI 142 (248)
Q Consensus 94 -------IKIWD~~tGk----~~~tie~~h~~~In~l~~~pdsgll~sa~ed~--~I~~w~I 142 (248)
|++|++.++. ++..... |...+.+++++|||..|++++.++ +..+|.+
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 9999999886 2322222 345788999999999888777554 4445544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-06 Score=81.95 Aligned_cols=119 Identities=3% Similarity=-0.024 Sum_probs=80.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CC---ceeEEecCCCCCCeeEEEEcCCc--eeee-CCC--
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-AD---KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSS-- 92 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~---~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~-- 92 (248)
...+..+.|+||+..|+.++.+...+......|.+||+. ++ ++..... ++...+.++.|+||+ ++++ .++
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~l~~~~~~~~~~ 265 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGSLIVATDRTGWW 265 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSCEEEEECTTSSC
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCeEEEEECCCCCe
Confidence 367788899999888876664420000011379999999 56 4433332 223679999999998 4444 456
Q ss_pred eEEEEECCCCCEEEEeecCCCCC--------eeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQ--------FNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~--------In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.|.+||..+|+....... +... +.+++|+|++.+++++++ +++++|.+.
T Consensus 266 ~l~~~~~~~~~~~~l~~~-~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRR-EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEEEECTTTCCEEESSCC-SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred EEEEEECCCCceeecccc-cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 566777777775543332 1221 678999999999999999 999999654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.34 E-value=2.7e-05 Score=67.50 Aligned_cols=113 Identities=12% Similarity=0.142 Sum_probs=77.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l 86 (248)
.+.....+..+ ...+.++++.|++. ++.++..+ +.|.+||..+++..... .+ ...+.+++|++++ +
T Consensus 33 ~~~~~~~~~~~-~~~~~~~~~~~~g~-l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~--~~~~~~i~~~~dg~l~ 101 (333)
T 2dg1_A 33 TAEPWLEISKK-GLQLEGLNFDRQGQ-LFLLDVFE-------GNIFKINPETKEIKRPFVSH--KANPAAIKIHKDGRLF 101 (333)
T ss_dssp ECEEEEEEESS-CCCEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECS--SSSEEEEEECTTSCEE
T ss_pred ccceeEEEecc-CccccCcEECCCCC-EEEEECCC-------CEEEEEeCCCCcEEEEeeCC--CCCcceEEECCCCcEE
Confidence 45555666554 35678888887655 55444332 38999999988765443 33 3679999999997 4
Q ss_pred eee-CC----CeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 87 LSM-DS----SVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 87 ~Ss-dd----~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~e 133 (248)
+++ .+ +.|.+||.++++....+.. .+...++++++.|+|.++++...
T Consensus 102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred EEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 443 34 5899999998876544431 11457999999999988777654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.32 E-value=2.6e-05 Score=66.61 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=78.9
Q ss_pred CCeeEEEEe----CCCCcEEEeecCceeeeecCCeeEEEEcC-CCce----eEEecCCCC-CCeeEEEEcCCc---eeee
Q psy2083 23 TQFNNLCHI----PESGMMFIANENKKILTYYIPAFYLYDIR-ADKP----LRVKDHMYG-LPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 23 ~~V~~~~~~----~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~p----l~~~~h~~~-~pI~sI~F~~d~---l~Ss 89 (248)
...+.++++ |++..++.+...+ +.|.+||+. .++. .......+. .....+++++++ +.+.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~-------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPT-------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTT-------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCC-------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 346788888 8765666554432 389999987 4432 111111111 346789999987 3334
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPSL 145 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~l 145 (248)
.++.|.+||.++|+.+..+.. +...+.+++|+||+..|+++ ..++.|..|++..-
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 678999999998988888876 25789999999999955554 55689999987653
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.2e-05 Score=70.65 Aligned_cols=130 Identities=8% Similarity=0.020 Sum_probs=81.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|+......+ ...+..+.|+| +++.++.++.+.. ......|.+||+..+++.....+..+..+..+.|+|+
T Consensus 173 ~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~--~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 173 VDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPH--DLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCS--SSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTT
T ss_pred EECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCC--CCCCceEEEEECCCCceeEeeccCCCccccceEECCC
Confidence 35556665554443 35788899999 6665655443220 0001378999998765433333222345888999999
Q ss_pred c--ee-eeCC-----CeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEe----------------CCCeEEE
Q psy2083 85 Y--VL-SMDS-----SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIAN----------------ENKKILT 139 (248)
Q Consensus 85 ~--l~-Ssdd-----~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~----------------ed~~I~~ 139 (248)
+ |+ .+.+ +.|.+||..+|+....... . ..+ ++|+| ||.++++++ .+..|.+
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM--P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC--C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeeeC--C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 7 33 3322 4599999998876443332 2 234 89999 999888765 3467888
Q ss_pred EEcC
Q psy2083 140 YYIP 143 (248)
Q Consensus 140 w~Ip 143 (248)
|++.
T Consensus 325 ~d~~ 328 (396)
T 3c5m_A 325 LNTK 328 (396)
T ss_dssp EETT
T ss_pred Eecc
Confidence 8864
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.5e-05 Score=67.03 Aligned_cols=124 Identities=12% Similarity=0.083 Sum_probs=79.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--C-CCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--M-YGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~-~~~pI~sI~F~ 82 (248)
++..++ ...+..+ ...+..+++.|++.++++...+. .|.+||..+++....... . ....++.++++
T Consensus 55 ~~~~~~--~~~~~~~-~~~~~~l~~~~dg~l~v~~~~~~--------~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 55 WSDDGQ--LSPEMHP-SHHQNGHCLNKQGHLIACSHGLR--------RLERQREPGGEWESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp EETTSC--EEEEESS-CSSEEEEEECTTCCEEEEETTTT--------EEEEECSTTCCEEEEECEETTEECCCCCCEEEC
T ss_pred EECCCC--eEEEECC-CCCcceeeECCCCcEEEEecCCC--------eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC
Confidence 555555 5555543 46788888888665444433333 799999988865433211 1 11346789999
Q ss_pred CCc--eee----e--------------CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 83 DNY--VLS----M--------------DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 83 ~d~--l~S----s--------------dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|++ +++ + ..+.|-.+|.. |+. ..+.. +....+.++|+|||..+++.+.+++|..|++
T Consensus 124 ~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~-~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 124 PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIR-DRVKPNGLAFLPSGNLLVSDTGDNATHRYCL 200 (296)
T ss_dssp TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEEC-CCSSEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeec-CCCCCccEEECCCCCEEEEeCCCCeEEEEEE
Confidence 998 332 1 02345455555 554 44444 2677899999999998877777899999998
Q ss_pred C
Q psy2083 143 P 143 (248)
Q Consensus 143 p 143 (248)
.
T Consensus 201 ~ 201 (296)
T 3e5z_A 201 N 201 (296)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.4e-06 Score=75.09 Aligned_cols=131 Identities=10% Similarity=0.070 Sum_probs=84.6
Q ss_pred cchhcCceeEEEecCCCCC-----eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQ-----FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~-----V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
+|..+|..++.+..+ ... +..++|+|++..++.++..+ ....|.+||+.++++.....+. ...+..+.
T Consensus 15 ~d~~~g~~~~~l~~~-~~~~~~~~~~~~~~SpdG~~l~~~~~~~-----g~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~ 87 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPT-DIICHRNYFYQKCFTQDGKKLLFAGDFD-----GNRNYYLLNLETQQAVQLTEGK-GDNTFGGF 87 (396)
T ss_dssp ECTTTCCEEEECSCT-TSCEECCCTTSCCBCTTSCEEEEEECTT-----SSCEEEEEETTTTEEEECCCSS-CBCTTTCE
T ss_pred ecCCCCcceEEEecC-CCCccceeeecCcCCCCCCEEEEEEecC-----CCceEEEEECCCCcEEEeecCC-CCccccce
Confidence 577788877777543 222 67888999888766655442 1247889999988765543322 22233478
Q ss_pred EcCCc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeE-------------------EEEeCCCCEEEEE-----eC
Q psy2083 81 FHDNY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN-------------------LCHIPESGMMFIA-----NE 133 (248)
Q Consensus 81 F~~d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~-------------------l~~~pdsgll~sa-----~e 133 (248)
|+||+ | .++.++.|.+||..+|+....... +.....+ ++++||+..++.+ ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 99997 4 456777999999999887665553 1332222 3457777665544 34
Q ss_pred CCeEEEEEcCC
Q psy2083 134 NKKILTYYIPS 144 (248)
Q Consensus 134 d~~I~~w~Ip~ 144 (248)
+..|.+|++..
T Consensus 167 ~~~l~~~d~~~ 177 (396)
T 3c5m_A 167 TCRLIKVDIET 177 (396)
T ss_dssp CEEEEEEETTT
T ss_pred cceEEEEECCC
Confidence 56777777643
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-05 Score=74.35 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=80.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-----------eeEEecCCCCCCeeEEEEcCCc-eeeeC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-----------PLRVKDHMYGLPIRDIKFHDNY-VLSMD 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----------pl~~~~h~~~~pI~sI~F~~d~-l~Ssd 90 (248)
..++.++.++..|++++||.+ .+.+|++.+.+ |.....+. . |+.|+| .+. ++.+.
T Consensus 38 ~~~nlLais~~~gll~a~~~~---------~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp--~-V~~l~f-d~~~L~v~~ 104 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS---------KAVVGELQLLRDHITSDSTPLTFKWEKEIP--D-VIFVCF-HGDQVLVST 104 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT---------EEEEEEHHHHHHHHHSSSCCCCCSEEEECT--T-EEEEEE-ETTEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC---------EEEEEEhhHhhhhhccccccccceEEeeCC--C-eeEEEE-CCCEEEEEc
Confidence 368999999999999988888 47789865432 43344444 5 999999 333 55558
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++||..+-....++.. +..+++++.+.+.. +++++.|+.+.+|++..
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNNT--LVILNSVNDLSALDLRT 155 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSSE--EEEEETTSEEEEEETTT
T ss_pred CCcEEEEEchhhhccCccce-eecceeeEEecCCC--EEEEECCCCEEEEEccC
Confidence 89999999987666556665 47789988776653 88899999999999874
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.14 E-value=4.2e-05 Score=64.02 Aligned_cols=112 Identities=3% Similarity=-0.025 Sum_probs=76.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~ 99 (248)
..+..+++.+++. ++.+...+ +.|.+||........... .....+..|++++++ .+ ...++.|.+||.
T Consensus 150 ~~p~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 150 NDPDGVAVDNSGN-VYVTDTDN-------NRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CSCCCEEECTTCC-EEEEEGGG-------TEEEEECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCceeEEEeCCCC-EEEEECCC-------CEEEEEecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 3567788887654 55554432 389999998765433221 111457899999987 33 335788999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+.... .+...+...+.++++.|+|.++++...+++|.+|..+.
T Consensus 221 ~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 221 GSTTST-VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TCSCCE-ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCcce-eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 755433 33321135788999999999888888899999997653
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=3.8e-05 Score=74.28 Aligned_cols=100 Identities=7% Similarity=-0.063 Sum_probs=79.7
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECC--CCCEEEEe
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKD--NGSLFTCI 108 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~--tGk~~~ti 108 (248)
++.++++..++ |+|.++|..+++.+.....+ ..+..+.|+||+ .+++.++.|.+||.. +++.+.++
T Consensus 166 ~~~~~V~~~~~-------~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 166 ENLFSVTLRDA-------GQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGEEEEEETTT-------TEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CceEEEEeCCC-------CeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 34455555553 59999999999888776554 567799999998 555678899999996 89999999
Q ss_pred ecCCCCCeeEEEEe----CCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 109 ESGDQTQFNNLCHI----PESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 109 e~~h~~~In~l~~~----pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.. ......++|+ |||++++++++. ++|.+++...
T Consensus 237 ~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 237 KI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 87 4567899999 799999999876 8999998544
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00044 Score=58.05 Aligned_cols=125 Identities=6% Similarity=-0.027 Sum_probs=79.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++. +|+........+...+..+++.+++ .+..+.... +.|..||. +++............+..+++++++
T Consensus 125 ~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 125 ITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQN-------NAIGRITE-SGDITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred ECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCC-------CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC
Confidence 444 4554433222123567788887765 455444332 37999999 6654433222223467899999987
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ..++.|.+||. +|+... +.. .+...+.++++.|+|.+.++...++.|..|+.
T Consensus 195 ~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 195 ALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 333 34788999999 777543 432 12467899999999886666557788998874
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.05 E-value=8.2e-05 Score=64.46 Aligned_cols=102 Identities=8% Similarity=0.042 Sum_probs=73.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCce-----eEEecCCCCCCeeEEEEcCCc---eeeeCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKP-----LRVKDHMYGLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~p-----l~~~~h~~~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
...+.++++|++..++.+.+.. +.|..||+ .++.. +.... ........+++++++ ++....+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~-------~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLS-------YSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGG-------TEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred ccccceEEcCCCCEEEEecCCC-------CcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcCCC
Confidence 3568899999887776665543 38999998 44432 11111 111346789999987 3344677
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEeC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIANE 133 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~e 133 (248)
.|..||.++|+.+..+.. +...+++++|. ||++.|++++.
T Consensus 221 ~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEcC
Confidence 899999999999999987 24689999998 89888877764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00019 Score=62.22 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=79.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE---EecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR---VKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~---~~~h~~~~pI~sI~F~ 82 (248)
+++.+|+..... . ....+.++|+|++..++.+..... ....+.|..||+..+. +. ............+.++
T Consensus 174 ~d~~~g~~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 174 LPPDGSPLQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp ECSSSCCCEEEE-E--ESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEEC
T ss_pred EcCCCCcEEEEe-c--CCCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEEC
Confidence 344445543332 2 245688999998876776655410 0001379999998654 21 1111111234678899
Q ss_pred CCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 83 DNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 83 ~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++ |..+..+.|.+||. +|+.+..+.. +..+++++|.|+++.|++++.+ .+..+++
T Consensus 248 ~~G~lwv~~~~gv~~~~~-~g~~~~~~~~--~~~~~~~~f~~d~~~L~it~~~-~l~~~~~ 304 (305)
T 3dr2_A 248 RGGWLWSSSGTGVCVFDS-DGQLLGHIPT--PGTASNCTFDQAQQRLFITGGP-CLWMLPL 304 (305)
T ss_dssp TTSCEEECCSSEEEEECT-TSCEEEEEEC--SSCCCEEEECTTSCEEEEEETT-EEEEEEC
T ss_pred CCCCEEEecCCcEEEECC-CCCEEEEEEC--CCceeEEEEeCCCCEEEEEcCC-eEEEEEC
Confidence 888 44444456999999 5899988886 4468899999999988888875 3444443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.94 E-value=6.3e-05 Score=73.77 Aligned_cols=115 Identities=6% Similarity=0.027 Sum_probs=75.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCC---------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSS--------- 92 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~--------- 92 (248)
.+....|+||+..++.++++++ +...+|++||+.+++.+....+. ..+.+++|+||. +.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G---~e~~~i~v~dl~tg~~~~~~~~~--~~~~~~~wspD~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGG---SDWRTVKFVGVADGKPLADELKW--VKFSGLAWLGNDALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETT---CSEEEEEEEETTTCCEEEEEEEE--EESCCCEESTTSEEEEEECCCC--------
T ss_pred EEEeEEECCCCCEEEEEEcCCC---CceEEEEEEECCCCCCCCccCCC--ceeccEEEECCCEEEEEEecCccccccccc
Confidence 5678899998887766554421 11137999999999875532221 234678999985 4444333
Q ss_pred -----eEEEEECCCCCE--EEEeec-CCCCCeeEEEEeCCCCEEEEEeCCC-----eEEEEEcC
Q psy2083 93 -----VVKIWSKDNGSL--FTCIES-GDQTQFNNLCHIPESGMMFIANENK-----KILTYYIP 143 (248)
Q Consensus 93 -----~IKIWD~~tGk~--~~tie~-~h~~~In~l~~~pdsgll~sa~ed~-----~I~~w~Ip 143 (248)
.|.+|+..++.. ...++. .++..+.++.++|||..|+..+.++ .|.+|++.
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 499999988762 223332 1223578999999999888777543 77777764
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00098 Score=55.86 Aligned_cols=126 Identities=9% Similarity=-0.002 Sum_probs=78.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|.. |+........+...+..+++.+++. +..+...+ |.|..||.. ++............+.+|.+++++
T Consensus 41 ~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g 110 (299)
T 2z2n_A 41 INLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAA-------NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG 110 (299)
T ss_dssp ECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred EcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCC-------CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC
Confidence 4554 5543332121235677888877654 44444422 379999986 332111111123568999999987
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ..++.|.+||. +|+......+.+...++++++.|+|.+.++...++.|..|+.
T Consensus 111 ~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 111 DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 333 35778999999 676543322212457899999999988877777788888864
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00031 Score=65.19 Aligned_cols=128 Identities=9% Similarity=0.018 Sum_probs=84.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCc-e-eeeecCCeeEEEEcCCCceeEEecCCC------CCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-K-ILTYYIPAFYLYDIRADKPLRVKDHMY------GLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~-~-~~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI 76 (248)
-+|..+++.+..+..+ ... .+.++||+..+++++... + .-|..+++|.+||..+.+++....-.. +..-
T Consensus 63 ViD~~t~~v~~~I~vG-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P 139 (386)
T 3sjl_D 63 VIDGEAGRVIGMIDGG-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP 139 (386)
T ss_dssp EEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEECCCCeEEEEEECC-CCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC
Confidence 3788899999999876 233 499999999888776310 0 000012389999999998876542211 1234
Q ss_pred eEEEEcCCc---eeee--CCCeEEEEECCCCCEEEEeecCCCCC--e---e---EEEEeCCCCEEEEEeCC-CeE
Q psy2083 77 RDIKFHDNY---VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQ--F---N---NLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~--I---n---~l~~~pdsgll~sa~ed-~~I 137 (248)
..+.|+||+ .++. .++.|.++|..+++.+.++.. +.. + . -+++++||.++++..++ +++
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 579999998 3343 378999999999999999974 221 0 0 13555666666665544 444
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00019 Score=69.77 Aligned_cols=135 Identities=9% Similarity=0.062 Sum_probs=83.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee--------eeecCCeeEEEEcCCCce--eEEe-cCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI--------LTYYIPAFYLYDIRADKP--LRVK-DHMYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~--------~~~~~G~V~LwDlRs~~p--l~~~-~h~~~~ 74 (248)
+|..+|+.......+ ..+..++|+||+..++.++.+..- -......|.+||+.++.. ..+. ...+..
T Consensus 156 ~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~ 233 (710)
T 2xdw_A 156 MKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPK 233 (710)
T ss_dssp EETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCe
Confidence 456667766532222 235678999988877776655310 000112499999998752 2332 222335
Q ss_pred CeeEEEEcCCc---eeeeC-----CCeEEEEECCC------CC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCC----C
Q psy2083 75 PIRDIKFHDNY---VLSMD-----SSVVKIWSKDN------GS-LFTCIESGDQTQFNNLCHIPESGMMFIANEN----K 135 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssd-----d~~IKIWD~~t------Gk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed----~ 135 (248)
.+.++.|+||+ ++++. +..|.+||..+ |+ .+..+.+ +...+.. .|+|+|+.|+..+.. .
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID-NFEGEYD-YVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC-CCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence 67899999998 33332 56899999987 54 4666766 2445544 588999877766543 3
Q ss_pred eEEEEEcCC
Q psy2083 136 KILTYYIPS 144 (248)
Q Consensus 136 ~I~~w~Ip~ 144 (248)
+|.+|++..
T Consensus 312 ~l~~~d~~~ 320 (710)
T 2xdw_A 312 RLINIDFTD 320 (710)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 588887654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00039 Score=57.97 Aligned_cols=110 Identities=5% Similarity=-0.004 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
..+..+++.+++ .++.+...+ +.|.+||..+....... ......+..|++++++ .++ ..++.|.+||.
T Consensus 108 ~~p~~i~~~~~g-~l~v~~~~~-------~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 108 NYPEGLAVDTQG-AVYVADRGN-------NRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp SSEEEEEECTTC-CEEEEEGGG-------TEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred CCCcceEECCCC-CEEEEECCC-------CEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 567888888855 455554432 37999987765443322 1111357899999987 333 45789999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++........ +...++++++.|+|.+.++...++.|..|+.
T Consensus 179 ~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 179 ESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp TTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 87765544333 1367889999999977777777889999975
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00017 Score=66.86 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=80.8
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee----------CCCeE
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM----------DSSVV 94 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss----------dd~~I 94 (248)
....|++..++++.... ...+++|.+.|..+.+.+.....+. .| . +.++||+ + +++ .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~---~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAH---FAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGG---GCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcc---cCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 34457777787776530 0012489999999999887765443 35 4 9999998 3 332 36789
Q ss_pred EEEECCCCCEEEEeecCC------CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCCC
Q psy2083 95 KIWSKDNGSLFTCIESGD------QTQFNNLCHIPESGMMFIANE--NKKILTYYIPSL 145 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h------~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~l 145 (248)
.+||..+++.+.++.... ......++|+|||+.+++++. ++.|.++|+...
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 999999999999987410 024667999999999999985 578999986553
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00069 Score=59.72 Aligned_cols=126 Identities=5% Similarity=-0.044 Sum_probs=88.0
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+.+.++++..+.......+.|.++ |.++.+++.. ..++|..+|+.+++.+....-.....--.+.++.+. ++
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~d-g~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~ 81 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAEN-DTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQV 81 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECST-TEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CceEEEEEECCCCCCcccEEEeCC-CeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEE
Confidence 567888887653345678999887 5777655421 024899999999988776432211223467777655 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+-.++.|-++|..+++.+.++.. . .-....+++||+.+++++.+++|.+.+...
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTH--Q-MKDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEEC--C-SSSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred EecCCEEEEEECCCCcEEEEEEC--C-CCCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 45689999999999999999975 2 111244668998888888888998888544
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00031 Score=60.84 Aligned_cols=104 Identities=6% Similarity=0.081 Sum_probs=69.5
Q ss_pred eCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE-EEEcCCc--eeeeCCCeEEEEECCCCCEEEE
Q psy2083 31 IPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD-IKFHDNY--VLSMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 31 ~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s-I~F~~d~--l~Ssdd~~IKIWD~~tGk~~~t 107 (248)
+|++..++.++.+..-.....+.|.+|| ++++.... ..+...|.+ +.|+ ++ +++++++.++|| ..+|+....
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~-~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~~ 297 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL-DEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKPI 297 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS-TTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEEE
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc-ccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEEE
Confidence 8888777766544210011124788888 55543332 233467886 9999 87 344678899999 887776444
Q ss_pred eecCCCCCeeEEEEeCCCCEEEEEeCCCeE-EEEEcC
Q psy2083 108 IESGDQTQFNNLCHIPESGMMFIANENKKI-LTYYIP 143 (248)
Q Consensus 108 ie~~h~~~In~l~~~pdsgll~sa~ed~~I-~~w~Ip 143 (248)
+.. ...|.+++++| +++++++.+.+. .+|.+.
T Consensus 298 ~~~--~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 298 AKG--RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ECS--SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ecC--CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 433 67899999999 788888877665 777764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00059 Score=59.12 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=72.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC---CCeeEEEEcCCc-eeeeC-------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG---LPIRDIKFHDNY-VLSMD------- 90 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~---~pI~sI~F~~d~-l~Ssd------- 90 (248)
...++.+++.+++. ++++.... +.|.+||.. ++......+..+ ..++++.+++++ +.-+|
T Consensus 85 ~~~~~gl~~d~dG~-l~v~~~~~-------~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 85 TAFTNGNAVDAQQR-LVHCEHGR-------RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp CSCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred CCccceeeECCCCC-EEEEECCC-------CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 35678888888655 55554432 278999986 543222221111 246789999998 33221
Q ss_pred ------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC------CeEEEEEcC
Q psy2083 91 ------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN------KKILTYYIP 143 (248)
Q Consensus 91 ------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed------~~I~~w~Ip 143 (248)
.+.|..||..+|+..... . ....|.++|+||+..|+++... ..|..|++.
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe-c--CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 246778888778755443 3 4667899999999988777665 689999864
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0021 Score=53.87 Aligned_cols=126 Identities=7% Similarity=-0.016 Sum_probs=78.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++.. |+............+..+++.+++. ++.+...+ +.|..||. +++............+..|.+++++
T Consensus 130 ~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 130 LTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQN-------NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred ECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCC-------CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC
Confidence 4554 5544332221135677888777655 55554432 37999998 5554433221222467899999887
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ...+.|.+||. +|+......+.+...+.++++.|+|.+.++...++.|..|+.
T Consensus 200 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 333 35678999998 576544322212467889999999886666656788888864
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00065 Score=57.80 Aligned_cols=126 Identities=12% Similarity=0.102 Sum_probs=78.9
Q ss_pred cchhcCceeEEEe---cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecC---CCCCCeeE
Q psy2083 6 LRQDKGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDH---MYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~---~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h---~~~~pI~s 78 (248)
+|..+|+...... .++...+..+++.+++|.++.++..+ .|..||.. ++.... ... .....+++
T Consensus 51 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--------~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 51 IDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--------GLLVVQTD-GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp ECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--------EEEEEETT-SCEEECCSBCTTSCBCBCCCE
T ss_pred EeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--------CEEEEeCC-CCEEEEEeccCCCccccCCcC
Confidence 4555666543322 01125678888888746666655543 58899998 654333 211 11235889
Q ss_pred EEEcCCc--eee-eCC---------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEe----CCCCEEEEE-eCCC
Q psy2083 79 IKFHDNY--VLS-MDS---------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHI----PESGMMFIA-NENK 135 (248)
Q Consensus 79 I~F~~d~--l~S-sdd---------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~----pdsgll~sa-~ed~ 135 (248)
|.+++++ .++ ..+ +.|..||.. |+....... ....+.++++ |+++.|+++ ..++
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CCCcceEEEecccCCCCCEEEEEECCCC
Confidence 9999987 333 333 467777776 665444433 4567899999 999766555 5678
Q ss_pred eEEEEEcC
Q psy2083 136 KILTYYIP 143 (248)
Q Consensus 136 ~I~~w~Ip 143 (248)
.|..|++.
T Consensus 199 ~i~~~~~~ 206 (314)
T 1pjx_A 199 KLWSYDIK 206 (314)
T ss_dssp EEEEEEEE
T ss_pred eEEEEECC
Confidence 99999864
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00063 Score=60.23 Aligned_cols=116 Identities=9% Similarity=0.100 Sum_probs=74.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-----CCCCCeeEEEEcCC-c--eee-e---
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-----MYGLPIRDIKFHDN-Y--VLS-M--- 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-----~~~~pI~sI~F~~d-~--l~S-s--- 89 (248)
-..+..+++.+++ .|+.+..... .--.+.|..||+.+++.+..... .....++.|.|+++ + .++ +
T Consensus 66 ~~~p~gv~~d~~g-~L~v~D~g~~--~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 66 FDTVLGIKSDGNG-IVWMLDNGNQ--SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CSCEEEEEECSSS-EEEEEECHHH--HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred eeEeeEEEEcCCC-cEEEEcCCCC--cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 3567888888864 4554432100 00013799999999876554321 11234689999975 3 233 3
Q ss_pred CCCeEEEEECCCCCEEEEeecCCC-----------------------------CCeeEEEEeCCCCEEEEEeCCC-eEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQ-----------------------------TQFNNLCHIPESGMMFIANENK-KILT 139 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~-----------------------------~~In~l~~~pdsgll~sa~ed~-~I~~ 139 (248)
.++.|.+||..+|+....+.. |. ..+|.++++|||..|+++..++ ++..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~-~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQG-YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTT-CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred CCCeEEEEECCCCCEEEEecC-CCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 567999999999987766543 11 2368999999999888887665 5544
Q ss_pred EE
Q psy2083 140 YY 141 (248)
Q Consensus 140 w~ 141 (248)
++
T Consensus 222 ~~ 223 (343)
T 2qe8_A 222 IK 223 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0014 Score=56.49 Aligned_cols=122 Identities=6% Similarity=-0.010 Sum_probs=76.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC---CCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM---YGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~---~~~pI~sI~F~ 82 (248)
++..+|+. ..+... ..+..+++.+++. ++++..+ .|.+||..+++........ ....++.+.++
T Consensus 40 ~d~~~~~~-~~~~~~--~~~~~i~~~~dG~-l~v~~~~---------~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d 106 (297)
T 3g4e_A 40 WDSFTKQV-QRVTMD--APVSSVALRQSGG-YVATIGT---------KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVD 106 (297)
T ss_dssp EETTTCCE-EEEECS--SCEEEEEEBTTSS-EEEEETT---------EEEEEETTTTEEEEEEECCTTCSSEEEEEEEEC
T ss_pred EECCCCcE-EEEeCC--CceEEEEECCCCC-EEEEECC---------eEEEEECCCCcEEEEEecCCCCCCCCCCCEEEC
Confidence 45555554 334432 5688888888766 5555433 6899999987543322221 12347899999
Q ss_pred CCc--eeee-C---------CCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 83 DNY--VLSM-D---------SSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 83 ~d~--l~Ss-d---------d~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+++ .+++ . ...-+||.... |+....... ....|.++|+||+..|+.+ +.+++|..|++
T Consensus 107 ~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~--~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 107 PAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ--VDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp TTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE--ESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred CCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec--cccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 998 3332 2 23345666553 444433333 4567899999999866554 55789999987
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.74 E-value=3.8e-06 Score=76.18 Aligned_cols=130 Identities=8% Similarity=0.105 Sum_probs=61.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCee-EEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIR-DIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~-sI~F~~d 84 (248)
+|+.+|+++-.+.. +.+.+..+.+++..+++++.+ |.|..||..+++.++.........+. +..+..+
T Consensus 24 ~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~d--------g~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~ 92 (369)
T 2hz6_A 24 VSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPND--------GSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSD 92 (369)
T ss_dssp EETTTCCEEEEEEC---CCSCCCC-----CCEEECTTT--------CCEEEC-----CCSEECSCCHHHHHTTCSCC---
T ss_pred EECCCCCEEEEecC---CCceecceEcCCCEEEEeCCC--------CEEEEEECCCCceeeeeeccCccccccCceEecC
Confidence 68889998887765 245555555554445444444 48999999999877665322111111 1111123
Q ss_pred c--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 85 Y--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 85 ~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
+ ++++.++.|..||.++|+.+..+.. ... ..++|+++.+++++.|+.|..|+... -...|-.
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~--~~~---~~~~p~~~~v~~~~~dg~v~a~d~~t--G~~~W~~ 156 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSS--AFA---DSLSPSTSLLYLGRTEYTITMYDTKT--RELRWNA 156 (369)
T ss_dssp --CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSS--SSCCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecC--CCc---ccccccCCEEEEEecCCEEEEEECCC--CCEEEeE
Confidence 3 4456788999999999999888876 222 35668999999999999999998654 2456753
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0008 Score=66.05 Aligned_cols=96 Identities=9% Similarity=0.067 Sum_probs=67.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM 128 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll 128 (248)
|.|..||+++++.++...++ .++.+..+..++ ++++.++.+++||.++|+.+.++..++...-+-+.+.++|..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cEEEEEeCCCCcEEeecCCC--CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 78999999999998887654 566665565543 4456799999999999999999985212222335666888655
Q ss_pred EEE-eC----------------CCeEEEEEcCCCCCCC
Q psy2083 129 FIA-NE----------------NKKILTYYIPSLGPAP 149 (248)
Q Consensus 129 ~sa-~e----------------d~~I~~w~Ip~lG~aP 149 (248)
++. +. .+.+..|.+|.-...|
T Consensus 535 v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a~~~ 572 (677)
T 1kb0_A 535 VSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKARMP 572 (677)
T ss_dssp EEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCCCC
T ss_pred EEEeccCCccccccccccccCCCCeEEEEecccccccc
Confidence 543 22 3688999988544444
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00099 Score=60.56 Aligned_cols=130 Identities=13% Similarity=0.037 Sum_probs=84.4
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCc-ee-eeecCCeeEEEEcCCCceeEEecCC-C-----CCC
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-KI-LTYYIPAFYLYDIRADKPLRVKDHM-Y-----GLP 75 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~-~~-~~~~~G~V~LwDlRs~~pl~~~~h~-~-----~~p 75 (248)
.-+|..+|+.+.++..+ ... .++++||+..++.++... .. -|..+++|.+||+.+.+++....-. . +..
T Consensus 50 ~v~D~~t~~~~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEECCCCeEEEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 34678899999998876 233 899999999888886310 00 0011248999999988776543211 0 112
Q ss_pred eeEEEEcCCc---eeee-C-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 76 IRDIKFHDNY---VLSM-D-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 76 I~sI~F~~d~---l~Ss-d-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
-..+.|+||+ ++++ . ++.|-++| .+++.+.+ +.. ... +.+.|++ ..+++.+.|+++..++.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~~---~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PTC---YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cce---EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 3479999997 3333 3 57899999 99999888 654 222 3455655 34445556676666655
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0017 Score=57.01 Aligned_cols=102 Identities=9% Similarity=0.121 Sum_probs=69.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CC-ce-----eEEecCCCCCCeeEEEEcCCc---eeeeCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--AD-KP-----LRVKDHMYGLPIRDIKFHDNY---VLSMDS 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~-~p-----l~~~~h~~~~pI~sI~F~~d~---l~Ssdd 91 (248)
...+.++++|++..++.+.... +.|.+||+. ++ .. +.... ........+.+.+++ +++..+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~-------~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKV-------NRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTT-------CEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETT
T ss_pred cccCCeEEcCCCCEEEEEECCC-------CEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCCEEEEEeCC
Confidence 3567888888877666554433 389999986 55 21 21221 112345789999887 333356
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEeCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIANEN 134 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ed 134 (248)
+.|.+||. +|+.+..+.. +...+.+++|. ||++.|++++..
T Consensus 251 ~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 251 GAVDRYDT-DGNHIARYEV-PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TEEEEECT-TCCEEEEEEC-SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CEEEEECC-CCCEEEEEEC-CCCCcEEEEEecCCCCEEEEEecC
Confidence 78999999 6888888876 25579999998 898877666544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0037 Score=52.27 Aligned_cols=110 Identities=8% Similarity=-0.025 Sum_probs=72.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
..+..+++.+++ .++.+...+ +.|..||.. ++............+.++++.+++ .++ ..++.|..||.
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~-------~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGA-------NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTT-------TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CcceeEEECCCC-CEEEEecCC-------CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 567777777655 455544432 379999988 544322221123568999999887 333 34778999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. |+......+.....++++++.|+|.+.++...++.|..|+.
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 8 77653222211457899999999997666666788888864
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00062 Score=66.08 Aligned_cols=116 Identities=5% Similarity=-0.053 Sum_probs=70.9
Q ss_pred eEEEEeCCCCcEEEeecCceee-----eecCCeeEEEEcCCCce--eEEe-cCCCCCCeeEEEEcCCc---eeeeCCC--
Q psy2083 26 NNLCHIPESGMMFIANENKKIL-----TYYIPAFYLYDIRADKP--LRVK-DHMYGLPIRDIKFHDNY---VLSMDSS-- 92 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~-----~~~~G~V~LwDlRs~~p--l~~~-~h~~~~pI~sI~F~~d~---l~Ssdd~-- 92 (248)
..++|+||+..++.++.+..-. ......|++||+.++.. ..+. ...+...+.++.|+||+ ++++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 5788999888777776653000 00112499999998752 2333 22333578899999998 3344333
Q ss_pred --eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---CCeEEEEEcCC
Q psy2083 93 --VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---NKKILTYYIPS 144 (248)
Q Consensus 93 --~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---d~~I~~w~Ip~ 144 (248)
.|.+||..+|+ +..+.+ +...+....+ |+|+++++.+. +.+|..|++..
T Consensus 251 ~~~l~~~~~~~~~-~~~l~~-~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 251 ENDVYWKRPGEKD-FRLLVK-GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp EEEEEEECTTCSS-CEEEEE-CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB
T ss_pred ceEEEEEcCCCCc-eEEeec-CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC
Confidence 67777766665 445554 2455555555 66665555442 47888888643
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0013 Score=59.88 Aligned_cols=106 Identities=9% Similarity=-0.003 Sum_probs=74.1
Q ss_pred eCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-----------CCCeEEE
Q psy2083 31 IPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-----------DSSVVKI 96 (248)
Q Consensus 31 ~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-----------dd~~IKI 96 (248)
.|++..++++.. ... ...+|.+||..+++.+....-+. .| .+.|+||+ +..+ .+++|.+
T Consensus 29 ~~~~~~~yv~~~~~~~----~~~~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 29 GADGRRSYINLPAHHS----AIIQQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCCCEEEEeCCcccC----CccEEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 355555666654 210 00078999999998776654442 34 99999998 3333 2678999
Q ss_pred EECCCCCEEEEeecC---C---CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCC
Q psy2083 97 WSKDNGSLFTCIESG---D---QTQFNNLCHIPESGMMFIANE--NKKILTYYIPS 144 (248)
Q Consensus 97 WD~~tGk~~~tie~~---h---~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~ 144 (248)
||..+++.+.++... + ......++++|||+.|++++. +..|.+++ ..
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 999999999888641 0 123457899999999999985 47899988 54
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0053 Score=53.98 Aligned_cols=130 Identities=12% Similarity=0.164 Sum_probs=90.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-CCCC---eeEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-YGLP---IRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-~~~p---I~sI~ 80 (248)
-+|+.+++.+.++..+ ... .....+|++.++++.+++ +|.+.|..+.+.+....-+ .+.| .+.+.
T Consensus 90 viD~~t~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~--------~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTS--------ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EEETTTTEEEEEEECC-SSS--CCEEEECSSSEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEECCCCcEEEEEECC-CCC--eEEEEECCCEEEEECCCC--------eEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 4788899999998754 111 222445778888776543 8999999998765543211 1233 57888
Q ss_pred EcCCc-eee-e-CCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 81 FHDNY-VLS-M-DSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~-l~S-s-dd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
|. ++ +.. . .++.|-+-|+.+|+.+.++... .....|.+++.|+++.+++++ ..++|..-++..
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 88 55 333 2 5789999999999999999741 003568999999998777777 558888887765
Q ss_pred CC
Q psy2083 145 LG 146 (248)
Q Consensus 145 lG 146 (248)
..
T Consensus 238 ~~ 239 (266)
T 2iwa_A 238 VR 239 (266)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0035 Score=57.44 Aligned_cols=112 Identities=10% Similarity=0.044 Sum_probs=75.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCC--CeeEEEEcCC-c-ee--eeCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGL--PIRDIKFHDN-Y-VL--SMDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~--pI~sI~F~~d-~-l~--Ssdd~~ 93 (248)
..++.+++.|++|.++.+..+ |.|..||..++...... ..+... |.+.|+|+|+ + +. .+..+.
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~--------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSN--------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTT--------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEEeCCCCeEEEEECC--------CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 567788888877887775443 48999999887533321 111111 3349999995 4 33 345789
Q ss_pred EEEEECCCCCEEEEeecCC--------------CCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 94 VKIWSKDNGSLFTCIESGD--------------QTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h--------------~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
|..||.+ |+ +..+.+.. -...+.+++.|+|.++++-. .+.+|+.|+.+.
T Consensus 291 I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 291 VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 9999976 44 34443310 13478999999999777766 788999998653
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0023 Score=62.74 Aligned_cols=51 Identities=10% Similarity=0.217 Sum_probs=44.1
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|..||..||+.+-.+.. ..++++..+.++++++++++.|+.+.+|+...
T Consensus 457 g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 6899999999999888875 56677777888999999999999999999754
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0013 Score=61.52 Aligned_cols=129 Identities=5% Similarity=-0.004 Sum_probs=88.5
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCce--eeeecCCeeEEEEcCCCceeEEecCC------CCCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK--ILTYYIPAFYLYDIRADKPLRVKDHM------YGLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~--~~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI 76 (248)
-+|..+++.+..+..+ ... .+.++||+..+++++.... ..|-.++.|.++|..+.+.+....-. .+..-
T Consensus 103 VID~~t~~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P 179 (426)
T 3c75_H 103 VIDGSTGRILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ 179 (426)
T ss_dssp EEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEECCCCEEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 4788999999999876 234 8999999999888763100 00011248999999999887654211 01234
Q ss_pred eEEEEcCCc---eeee-C-CCeEEEEECCCCCEEEEeecCCCCC--e------eEEEEeCCCCEEEEEeCCCeEE
Q psy2083 77 RDIKFHDNY---VLSM-D-SSVVKIWSKDNGSLFTCIESGDQTQ--F------NNLCHIPESGMMFIANENKKIL 138 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss-d-d~~IKIWD~~tGk~~~tie~~h~~~--I------n~l~~~pdsgll~sa~ed~~I~ 138 (248)
..+.|+||+ .++. . ++.|-+.|..+++.+.++.. ... + .-+.+++||.++++...++++.
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~ 252 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFADGETK 252 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCE
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEE
Confidence 578999998 3343 3 68999999999999999875 221 1 1256778888777777666654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0011 Score=64.75 Aligned_cols=116 Identities=9% Similarity=0.104 Sum_probs=71.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCC-------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDS------- 91 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd------- 91 (248)
...+..++++||+..++-+.+.+ |+...+|++||+.+++.+....+. ....+++|+ |+ +.++.+
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~---G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLA---GSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECS---SCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC----
T ss_pred cEEEEEEEECCCCCEEEEEEecC---CCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccc
Confidence 34577888999887666332221 112248999999999865532211 113577899 76 444544
Q ss_pred ------CeEEEEECCCCCE--EEEeec-C-CCCCeeEEEEeCCCCEEEEEeC-C---CeEEEEEcC
Q psy2083 92 ------SVVKIWSKDNGSL--FTCIES-G-DQTQFNNLCHIPESGMMFIANE-N---KKILTYYIP 143 (248)
Q Consensus 92 ------~~IKIWD~~tGk~--~~tie~-~-h~~~In~l~~~pdsgll~sa~e-d---~~I~~w~Ip 143 (248)
..|++|++.++.. ...++. . |...+.++.++|||..|+.... + +.|.++++.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 3599999987642 223332 1 1334678999999997755442 2 467777653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.41 E-value=1e-05 Score=73.33 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=50.4
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC---
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES--- 125 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds--- 125 (248)
|.|..||+++++.++..... . .+.++|++ ++++.++.|..||.++|+.+.+++. . .....++.++.
T Consensus 102 g~v~a~D~~tG~~~w~~~~~--~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~-~~~~~~~~~~~~~~ 173 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSA--F---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--F-DYAASLPEDDVDYK 173 (369)
T ss_dssp EEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE--E-EECCBCCCCCTTCC
T ss_pred CEEEEEECCCCcEEEEecCC--C---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec--c-cccCccccCCcccc
Confidence 48999999999988876433 1 23445544 4456789999999999998766653 1 12233444443
Q ss_pred CEEEEEeCCCeEEEEEcCCCCCCCCcc
Q psy2083 126 GMMFIANENKKILTYYIPSLGPAPKWC 152 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~lG~aP~wc 152 (248)
+.+++++.++.|..|+... | ...|-
T Consensus 174 ~~v~~~~~dg~v~a~d~~t-G-~~~W~ 198 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSES-G-DVLWI 198 (369)
T ss_dssp CCEEEEETSCEEEEECTTT-C-CEEEE
T ss_pred ceEEEECCCCEEEEEECCC-C-cEEEE
Confidence 6788889999999998654 2 34564
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0051 Score=53.96 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=67.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
.....+++|+++.++.++..+ +.|..||..+++.... ... ..|.++.|++++ ++++. ..|.+||.++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~-------~~i~~~d~~~~~~~~~-~~~--~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~ 118 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILE-------RELHELHLASGRKTVH-ALP--FMGSALAKISDSKQLIASD-DGLFLRDTAT 118 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGG-------TEEEEEETTTTEEEEE-ECS--SCEEEEEEEETTEEEEEET-TEEEEEETTT
T ss_pred CCcCCeEeCCCCEEEEEECCC-------CEEEEEECCCCcEEEE-ECC--CcceEEEEeCCCeEEEEEC-CCEEEEECCC
Confidence 346788888877776665543 4899999998754322 222 579999999988 45554 4588999998
Q ss_pred CCEEEEeec--CC-CCCeeEEEEeCCCCEEEEEe
Q psy2083 102 GSLFTCIES--GD-QTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 102 Gk~~~tie~--~h-~~~In~l~~~pdsgll~sa~ 132 (248)
|+....... .. ...++++++.|+|.+.++..
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 885432221 00 13589999999999776554
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0031 Score=57.87 Aligned_cols=128 Identities=5% Similarity=-0.025 Sum_probs=78.6
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCCCeeEEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGLPIRDIKF 81 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~pI~sI~F 81 (248)
.++..+|.+.+..... .... +++.++++.++++..++ .+.|.+||...+...... .......++++++
T Consensus 156 ~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav 226 (409)
T 3hrp_A 156 LISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEG------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVAL 226 (409)
T ss_dssp EEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSST------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEE
T ss_pred EEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCC------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEE
Confidence 4566666665555543 2333 88888887777776653 127889998766432222 1112356789999
Q ss_pred cC-Cc-eeee-CCCeEEEEECCCCCEEEE----eecCCCC--CeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 82 HD-NY-VLSM-DSSVVKIWSKDNGSLFTC----IESGDQT--QFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 82 ~~-d~-l~Ss-dd~~IKIWD~~tGk~~~t----ie~~h~~--~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+| ++ |..+ .++.|..||..++..... ..+ +.. |.+.++|+|+++.|+++ ..+.+|..|+.
T Consensus 227 ~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g-~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 227 DETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSG-SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCS-CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred eCCCCeEEEEECCCcEEEEECCCCCEEEEecccccC-CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 99 45 3334 467899999998764322 122 111 22499999965555555 55688888864
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.012 Score=51.11 Aligned_cols=122 Identities=8% Similarity=0.013 Sum_probs=82.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
++++++.+......-.+.|.+ +.|+ ++|..+ ...|+.+|+.+++.+....-.....--.+.+..+. +++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~--~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR--GHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET--TEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCccccccEEEEC--CEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE
Confidence 467777554356677888775 4555 444432 24899999999988776532211112356666665 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
-.++.+-++|.++++.+.++.. ...-..+ .+|++.|+++..+.+|.++|-..+
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~--~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRY--PGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTL 134 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEEC--SSCCCEE--EECSSCEEEECSSSEEEEECTTTC
T ss_pred eeCCEEEEEECCcCcEEEEEeC--CCCceEE--eeCCCEEEEECCCCeEEEEeCCCC
Confidence 5689999999999999999986 3322334 467888888888899999885543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0051 Score=54.36 Aligned_cols=120 Identities=8% Similarity=0.088 Sum_probs=82.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
.++++++.+......-.+.|. ++.|+.++++. |.|+.+|+.+++.+... -.....--.|.+..+. +++
T Consensus 43 ~~Vv~~~phd~~~ftqGL~~~--~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 43 AHIIREYPHATNAFTQGLVFH--QGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp EEEEEEEECCTTCCEEEEEEE--TTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEE
T ss_pred eEEEEEEcCCCccccceEEEE--CCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEE
Confidence 367777765434455677765 35666555554 48999999999876655 2211122347777666 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
-.++.+-++|.++++.+.++.. ...-..+| +|++.|++++.+++|.++|...
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRY--SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEEC--SSCCCCEE--EETTEEEEECSSSEEEEECTTT
T ss_pred ccCCEEEEEECCcCcEEEEEeC--CCceeEEe--cCCCEEEEECCCCEEEEEcCCC
Confidence 5799999999999999999986 33323444 6788888887788898888544
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0015 Score=61.16 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=69.9
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee----------CCCeEEEEECCCCCEEEEeecC---C---
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM----------DSSVVKIWSKDNGSLFTCIESG---D--- 112 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss----------dd~~IKIWD~~tGk~~~tie~~---h--- 112 (248)
++|.++|+.+.+.+....-+. .| .|.|+||+ .++. .++.|.++|..+++.+.++... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 489999999998887765442 46 89999997 2332 3678999999999999998640 0
Q ss_pred CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANE--NKKILTYYIPSL 145 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~l 145 (248)
......++|+|||+.+++++. ++.|.+.|....
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 123557899999999999985 478988886653
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0043 Score=60.93 Aligned_cols=78 Identities=6% Similarity=-0.062 Sum_probs=54.6
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGM 127 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgl 127 (248)
+|+|..||+++++.++...+. .++..-.+...+ | +++.|+.|+.||.+||+.+-.++.++...-+-+.+..||..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceeEEEEECCCCCeEeEccCC--CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 478999999999998876554 455544454443 3 34579999999999999999988621222234667788865
Q ss_pred EEE
Q psy2083 128 MFI 130 (248)
Q Consensus 128 l~s 130 (248)
.++
T Consensus 532 yv~ 534 (689)
T 1yiq_A 532 YVT 534 (689)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0071 Score=53.25 Aligned_cols=123 Identities=10% Similarity=0.021 Sum_probs=81.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
-++++++.+......-.+.|. + +.|+ ++|.++ ...|+.+|+.+++.+....-.....--.|.+..+. ++
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~-~-~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~l 102 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR-N-GYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGL 102 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-T-TEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred eEEEEEecCCCCcccceEEEE-C-CEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEE
Confidence 356677755434455677776 4 4555 444432 13899999999988776543311222446776665 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+-.++.+-++|.++++.+.++.. ...=. .+.+|++.|++++.+.+|..+|-..+
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~--~~eG~--glt~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNY--DGEGW--GLTHNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEEC--SSCCC--CEEECSSCEEECCSSSEEEEECTTTC
T ss_pred EeeCCEEEEEECccCcEEEEEEC--CCCce--EEecCCCEEEEECCCCeEEEEcCCCC
Confidence 55689999999999999999986 22222 34467888887777888888875543
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0066 Score=53.58 Aligned_cols=121 Identities=11% Similarity=0.191 Sum_probs=75.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+.+|+.+-..... ....... +++.++.++.+ |.|..+|.++++.++.........+.+.....+.
T Consensus 254 ~d~~tG~~~w~~~~~---~~~~~~~--~~~~l~~~~~~--------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 320 (376)
T 3q7m_A 254 LDLRSGQIMWKRELG---SVNDFIV--DGNRIYLVDQN--------DRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGN 320 (376)
T ss_dssp EETTTCCEEEEECCC---CEEEEEE--ETTEEEEEETT--------CCEEEEETTTCCEEEEECTTTTSCCCCCEEETTE
T ss_pred EECCCCcEEeeccCC---CCCCceE--ECCEEEEEcCC--------CeEEEEECCCCcEEEeecccCCCcccCCEEECCE
Confidence 566667666554432 2223222 24455555554 4899999999998887642111233344444444
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++++.++.|.++|.++|+.+..+... ...+.+.... .++.|++++.++.+..|+
T Consensus 321 l~v~~~~g~l~~~d~~tG~~~~~~~~~-~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGRFVAQQKVD-SSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-TTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecC-CCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 55567889999999999998887751 3344322222 356788899999998885
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0061 Score=53.80 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=74.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe------cCCCCCCeeEEEEcCCc-eeeeC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK------DHMYGLPIRDIKFHDNY-VLSMD----- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~------~h~~~~pI~sI~F~~d~-l~Ssd----- 90 (248)
..+..++++|++..+++....+ +|.++||.+.+++. ..+ ...+-..+..|+|++++ |.-+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~------~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFY------QPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGG------CCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCC------CCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 4688999998765444432211 12367777665432 211 11122468999999987 44333
Q ss_pred --CCeEEEEECCCCCEEEEeecC-----CCCCeeEEEEeCCCCEEEEEe----CCCeEEEEEcC
Q psy2083 91 --SSVVKIWSKDNGSLFTCIESG-----DQTQFNNLCHIPESGMMFIAN----ENKKILTYYIP 143 (248)
Q Consensus 91 --d~~IKIWD~~tGk~~~tie~~-----h~~~In~l~~~pdsgll~sa~----ed~~I~~w~Ip 143 (248)
+..|.+||..+|+.+.++... +...++++++.|+++.++++. .+..|.+|+..
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 568999999999988887641 113579999999877776665 46889999865
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0043 Score=60.93 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..||+.||+.+-.+.. ..+++.-.+...++++|+|+.|+.++.|+...
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEEECCC
Confidence 37799999999999988876 45566667788999999999999999998643
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0066 Score=53.44 Aligned_cols=122 Identities=10% Similarity=0.158 Sum_probs=84.3
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+++|.....+ ..++ ++++.++.+.+++ +|.++|..+.+.+....- ..+.| +|.+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG--~glt--~dg~~L~~SdGs~--------~i~~iDp~T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG--WGLT--HNDQYLIMSDGTP--------VLRFLDPESLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC--CCEE--ECSSCEEECCSSS--------EEEEECTTTCSEEEEEECEETTEECCCEEEE
T ss_pred EEEECccCcEEEEEECCCCc--eEEe--cCCCEEEEECCCC--------eEEEEcCCCCeEEEEEEeccCCcccccccee
Confidence 34788899999999864222 3444 4567777765554 899999999876654321 12344 4567
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC-----------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG-----------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~-----------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
.|....|.. -.++.|-+-|+++|+.+..|... ...-.|.+|+.|+++.|++++.- ++|
T Consensus 178 e~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~ 249 (262)
T 3nol_A 178 EWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKV 249 (262)
T ss_dssp EEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCce
Confidence 887433333 35778999999999999998751 01356999999999999998865 443
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0013 Score=60.21 Aligned_cols=87 Identities=9% Similarity=-0.066 Sum_probs=67.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee----------CCCeEEEEECCCCCEEEEeecCC-C-----
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM----------DSSVVKIWSKDNGSLFTCIESGD-Q----- 113 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss----------dd~~IKIWD~~tGk~~~tie~~h-~----- 113 (248)
+|.++|..+.+.+....-+. .| .+.|+||+ + ++. .++.|.+||..+++.+.++..+. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 78899999999888765553 46 79999997 3 332 36899999999999999997410 0
Q ss_pred CCeeEEEEeCCCCEEEEEeCC--CeEEE--EEc
Q psy2083 114 TQFNNLCHIPESGMMFIANEN--KKILT--YYI 142 (248)
Q Consensus 114 ~~In~l~~~pdsgll~sa~ed--~~I~~--w~I 142 (248)
.....++|+|||+.+++++.. ..+.+ +|.
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTT
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEch
Confidence 245678999999999999863 56777 765
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0072 Score=57.27 Aligned_cols=141 Identities=11% Similarity=0.071 Sum_probs=88.4
Q ss_pred cccchhcCceeEEEecC-C-CCCeeEEEEeCCCCcEEEeecC------cee-----eeecCCeeEEEEcCCCceeEEecC
Q psy2083 4 QELRQDKGSLFTCIESG-D-QTQFNNLCHIPESGMMFIANEN------KKI-----LTYYIPAFYLYDIRADKPLRVKDH 70 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~-~-~~~V~~~~~~~~~g~l~~ag~d------~~~-----~~~~~G~V~LwDlRs~~pl~~~~h 70 (248)
..+|..+++++.+++.+ + ...-..+-++|+...++++.-- .+. .+-...+|.+||+.+++.+.+.+-
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 46889999999998732 1 1223457778877766665300 000 000124899999999877766544
Q ss_pred C-CCCCeeEEEE--cCCc----eeee-----CCCeEEEEECCCCCE--EEEee--cC---C------------CCCeeEE
Q psy2083 71 M-YGLPIRDIKF--HDNY----VLSM-----DSSVVKIWSKDNGSL--FTCIE--SG---D------------QTQFNNL 119 (248)
Q Consensus 71 ~-~~~pI~sI~F--~~d~----l~Ss-----dd~~IKIWD~~tGk~--~~tie--~~---h------------~~~In~l 119 (248)
+ .+..-..|.| +|++ +++. .+++|-+|..+.|+. .+.+. .. . ...+.++
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 3 1223345656 8886 5556 677887777665431 12221 10 0 1235688
Q ss_pred EEeCCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 120 CHIPESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 120 ~~~pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.++|||..|.+++.. +.|.+|+|..
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecC
Confidence 999999999999975 7999999853
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.011 Score=51.45 Aligned_cols=122 Identities=9% Similarity=0.129 Sum_probs=84.2
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+.+|.....+ ..++ ++++.|+.+.+++ +|.++|..+.+.+....- .++.| +|-+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G--wglt--~dg~~L~vSdgs~--------~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG--WALT--SDDSHLYMSDGTA--------VIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC--CEEE--ECSSCEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEEECCcCcEEEEEeCCCCc--eEEe--eCCCEEEEECCCC--------eEEEEeCCCCeEEEEEEEccCCcccccceee
Confidence 45788999999999865222 4555 4567777765554 899999999876654321 12233 4566
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
.+....|.. ..+..|.+-|+++|+.+..+... ...-.|.+++.|+++.|++.+.- ++|
T Consensus 156 e~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~ 228 (243)
T 3mbr_X 156 EWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPML 228 (243)
T ss_dssp EEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcE
Confidence 776444333 25778999999999999998731 01357999999999888888754 443
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00096 Score=61.16 Aligned_cols=127 Identities=7% Similarity=-0.048 Sum_probs=79.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC--ceeeeecCCeeEEEEcCCCceeEEecCC--C----CCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYIPAFYLYDIRADKPLRVKDHM--Y----GLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d--~~~~~~~~G~V~LwDlRs~~pl~~~~h~--~----~~pI 76 (248)
-+|..+++.+.++..+. .. .+.++||++.+++++.. ...-|..+++|.+||+.+.+++....-+ . +..-
T Consensus 50 vID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT
T ss_pred EEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCc
Confidence 47889999999998773 44 79999999998888631 0000001248999999999987765321 0 1224
Q ss_pred eEEEEcCCc---eeee--CCCeEEE--EECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNY---VLSM--DSSVVKI--WSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss--dd~~IKI--WD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~I 142 (248)
..+.|+||+ +++. ++..|.+ +|..+ +..+.. ... +.+.|+++ .+++.+.|+++...++
T Consensus 127 ~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~~~---~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--ASC---FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp TSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred ceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 689999998 3333 3577888 99987 566653 221 12334442 3333445555544444
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.015 Score=56.85 Aligned_cols=113 Identities=4% Similarity=-0.065 Sum_probs=73.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--c-eeEEecCCCCCCeeEEEEcCCc---eeeeC----CCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--K-PLRVKDHMYGLPIRDIKFHDNY---VLSMD----SSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~-pl~~~~h~~~~pI~sI~F~~d~---l~Ssd----d~~ 93 (248)
.+..+.++||+..++.++.+.. .....|.+||+.++ + +.....+. ..+....+ +++ ++.++ ...
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~-~dg~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGT---DPVNTVHVARVTNGKIGPVTALIPDL--KAQWDFVD-GVGDQLWFVSGDGAPLKK 342 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTT---CSCCEEEEEEEETTEECCCEEEECSS--SSCEEEEE-EETTEEEEEECTTCTTCE
T ss_pred EEEEEEECCCCCEEEEEEEccC---CCcceEEEEECCCCCCcccEEecCCC--CceEEEEe-ccCCEEEEEECCCCCCCE
Confidence 5788999998877776554320 01248999999887 4 43333333 33444434 554 33443 345
Q ss_pred EEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 94 VKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 94 IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|.+||..++ .....+-+++...+.+++++ ++.+++++.+++..++|.+.
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 999999886 35555555345567788887 67889999999988888654
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.012 Score=51.94 Aligned_cols=123 Identities=9% Similarity=0.165 Sum_probs=75.0
Q ss_pred cchhcCceeEEEecCCC--------CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe-
Q psy2083 6 LRQDKGSLFTCIESGDQ--------TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI- 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~--------~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI- 76 (248)
+|+.+|+.+-.+..... ..+...... +++.+++++.+ |.|..+|.++++.++..... ..+
T Consensus 68 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~--------g~l~a~d~~tG~~~W~~~~~--~~~~ 136 (376)
T 3q7m_A 68 LNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEK--------AQVYALNTSDGTVAWQTKVA--GEAL 136 (376)
T ss_dssp EETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETT--------SEEEEEETTTCCEEEEEECS--SCCC
T ss_pred EEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCC--------CEEEEEECCCCCEEEEEeCC--CceE
Confidence 67778887766554210 122222222 24555555554 48999999999988876433 222
Q ss_pred eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------eEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 77 RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------NNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 77 ~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------n~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.......+. ++.+.++.|..+|.++|+.+-.... ..++ ...+. +++.++++..++.+..++..
T Consensus 137 ~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~--~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 137 SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL--DMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC--CC-----CCCCCCEE--ETTEEEECCTTTEEEEEETT
T ss_pred cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC--CCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECC
Confidence 222333334 5566788999999999999888775 2222 22222 25677888888888888754
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0088 Score=56.69 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=77.0
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC--CCeeEEEEcCCc--eeeeC-----------
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG--LPIRDIKFHDNY--VLSMD----------- 90 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~--~pI~sI~F~~d~--l~Ssd----------- 90 (248)
.++.+.|++ +++++.++. -|...|.|.++|..+.+.+....-+-+ .--..+-|+|+. +++++
T Consensus 141 h~~~~~pdG-i~Vs~~g~~--~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNE--EGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEECSSC-EEEEEEEET--TSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cceeECCCe-EEEEcCCCc--CCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 456677866 555444431 123346899999999988776532211 112357889987 55664
Q ss_pred ---------CCeEEEEECCCCCEEEEeecCCC-CCeeEEEE--eCCCCEEEEEeC------CCeEEEEEc
Q psy2083 91 ---------SSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCH--IPESGMMFIANE------NKKILTYYI 142 (248)
Q Consensus 91 ---------d~~IKIWD~~tGk~~~tie~~h~-~~In~l~~--~pdsgll~sa~e------d~~I~~w~I 142 (248)
...|.+||..+++.+.++..+.. .....+.| +|++..++++++ +++|.+|+.
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 78999999999999999986201 34556666 999999999986 458876553
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0093 Score=52.69 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+++|... ..=..++ ++++.|+.+.+++ +|.++|..+.+.+....- .++.+ ++.+
T Consensus 119 ~V~D~~Tl~~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~--------~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeL 186 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYS--GEGWGLC--YWNGKLVRSDGGT--------MLTFHEPDGFALVGAVQVKLRGQPVELINEL 186 (268)
T ss_dssp EEEETTTTEEEEEEECS--SCCCCEE--EETTEEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEEECCcCcEEEEEeCC--CceeEEe--cCCCEEEEECCCC--------EEEEEcCCCCeEEEEEEeCCCCccccccccc
Confidence 45788999999999864 2224555 3466777665554 899999999876654311 12233 4677
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeC
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~e 133 (248)
.|....|.. ..+..|.+-|+++|+.+..|... ...-.|.+|+.|+++.|++++.
T Consensus 187 e~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 187 ECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 887444333 25778999999999999998741 0136799999999888887764
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.055 Score=45.41 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=73.2
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee--eeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL--SMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~--Ssdd~~IKIWD~ 99 (248)
....+++.++++.++.+.... +.|..+|+..+........+. .....|++++++ +. ....+.|.++|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISE-------PSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTT-------TEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCC-------CEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 456888888888888776543 489999998765433332221 246899999863 33 335778999998
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~I 142 (248)
+. +....+-.......+.+++.|+++.|+.+... ++|..+.+
T Consensus 109 ~g-~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 109 DG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp TS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CC-CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 74 33333332113567899999988887777754 57777764
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.14 Score=42.95 Aligned_cols=112 Identities=9% Similarity=-0.014 Sum_probs=72.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC----CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD----SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd----d~~IKI 96 (248)
.....+++.++++.++.+.... +.|..+|+...........+. ..-+.|+++|+ + +.-++ .+.|..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~-------~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~~~~~I~~ 150 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQL-------DRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNRDNPKIET 150 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCSSSCEEEE
T ss_pred CCccEEEEEecCCeEEEEECCC-------CEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCCCCcEEEE
Confidence 4678888888888887766543 489999987543222222121 23589999995 4 33332 457888
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
++.+ |+....+........+.+++.|+++.|+.+.. .++|..++..
T Consensus 151 ~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 151 SHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 8876 55444443211356889999999887777765 4788888753
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.013 Score=57.19 Aligned_cols=133 Identities=10% Similarity=-0.069 Sum_probs=90.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceee------------------------------eecCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKIL------------------------------TYYIPAFY 55 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~------------------------------~~~~G~V~ 55 (248)
+|..+++....+.-+ ++--.+.++|+++++++++.+.... ....+.|.
T Consensus 180 ID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 466677777776643 2345677899999988887653100 01125699
Q ss_pred EEEcCC--Cce-eEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEECCCCC------------EEEEeecCCCCCe
Q psy2083 56 LYDIRA--DKP-LRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWSKDNGS------------LFTCIESGDQTQF 116 (248)
Q Consensus 56 LwDlRs--~~p-l~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD~~tGk------------~~~tie~~h~~~I 116 (248)
+.|.++ ++. +....-+ ....+|.|+||+ ++.+ .+.+|.++|..+.+ .+..++. ....
T Consensus 258 VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--G~gP 333 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--GLGP 333 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC--CSCE
T ss_pred EEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC--CCCc
Confidence 999998 555 3222212 335789999998 4444 47899999999653 5667776 4677
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 117 NNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 117 n~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..++|+|||...++.--|++|..|++..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 8999999994444455689999999754
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.06 Score=52.53 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=69.3
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c--eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
+|.|.-||+++++.++...+. .++....+... + ++++.++.|+.||.++|+.+..++. ...+. -+.+..+|
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~--~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA--QSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC--CCCcccCceEEEECC
Confidence 489999999999998876544 44443333322 3 4445789999999999999999986 23222 23444566
Q ss_pred CEEEEEeC---------------------CCeEEEEEcCCCCCCCCcccccc
Q psy2083 126 GMMFIANE---------------------NKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 126 gll~sa~e---------------------d~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
.+.++.+. .+.|.+|-++..+.-|.|-.-++
T Consensus 513 ~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~p~~~~~~~ 564 (668)
T 1kv9_A 513 RQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLPPPAPAPA 564 (668)
T ss_dssp EEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCCCCCCCCC
T ss_pred EEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCccCCCCCCccccc
Confidence 54333322 35899999999888898854333
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.012 Score=57.47 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=80.5
Q ss_pred cchhc--Cce-eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce----------eEEecCCC
Q psy2083 6 LRQDK--GSL-FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP----------LRVKDHMY 72 (248)
Q Consensus 6 ~~~~~--G~~-~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p----------l~~~~h~~ 72 (248)
+|..+ |+. ++++.-+ .....+.++||+.++++++... .+|.+||+.+.+. .....-.-
T Consensus 259 ID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s-------~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLS-------PTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTS-------SBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred EeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCC-------CeEEEEECcccccccccccCcccceEEEcCC
Confidence 45555 666 6777654 3456899999988877776543 4999999996531 01112223
Q ss_pred CCCeeEEEEcCCc-e-eee-CCCeEEEEECCC----------CCEEEEeecCCCCCe-e----EEEEeCCCCEEEEEeCC
Q psy2083 73 GLPIRDIKFHDNY-V-LSM-DSSVVKIWSKDN----------GSLFTCIESGDQTQF-N----NLCHIPESGMMFIANEN 134 (248)
Q Consensus 73 ~~pI~sI~F~~d~-l-~Ss-dd~~IKIWD~~t----------Gk~~~tie~~h~~~I-n----~l~~~pdsgll~sa~ed 134 (248)
|..-..++|++++ + ++. -|.+|-.||.++ .+.+.++..+ ..+- + ..+++|||..|++++.-
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCC
Confidence 4667899999998 2 333 588888899987 6678888772 3321 1 12457999999999864
Q ss_pred C
Q psy2083 135 K 135 (248)
Q Consensus 135 ~ 135 (248)
.
T Consensus 409 s 409 (595)
T 1fwx_A 409 S 409 (595)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.029 Score=47.70 Aligned_cols=119 Identities=5% Similarity=0.032 Sum_probs=76.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+. |+..-....+ ...+.+.+..+ +|.++.++.++ .|..||.. ++.++..... ...+.++.+.+++
T Consensus 122 ~d~~-g~~~~~~~~~-~~~~~~~~~~~-~g~l~vgt~~~--------~l~~~d~~-g~~~~~~~~~-~~~~~~~~~d~~g 188 (330)
T 3hxj_A 122 INTD-GTEKWRFKTK-KAIYATPIVSE-DGTIYVGSNDN--------YLYAINPD-GTEKWRFKTN-DAITSAASIGKDG 188 (330)
T ss_dssp ECTT-SCEEEEEECS-SCCCSCCEECT-TSCEEEECTTS--------EEEEECTT-SCEEEEEECS-SCCCSCCEECTTC
T ss_pred EcCC-CCEEEEEcCC-CceeeeeEEcC-CCEEEEEcCCC--------EEEEECCC-CCEeEEEecC-CCceeeeEEcCCC
Confidence 5555 6665555543 23344444443 44566655543 79999999 7776655432 3467778887666
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+..+. +.|..+| .+|+.+..+.. ....++++++.++|. |.+++.++.+..++
T Consensus 189 ~l~v~t-~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 189 TIYFGS-DKVYAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAIN 241 (330)
T ss_dssp CEEEES-SSEEEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEEC
T ss_pred EEEEEe-CEEEEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEEC
Confidence 33333 7788999 77888777765 256788888888764 56677777777764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.025 Score=54.49 Aligned_cols=76 Identities=8% Similarity=0.071 Sum_probs=52.0
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEE-cCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKF-HDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F-~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pds 125 (248)
.|.|.-||+++++.++...+. .++..-.. ..++ .+++.|+.++.||.++|+.+-.++. ...+.. +.+..||
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~--~~g~~a~P~~y~~~G 540 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT--GSGIVSPPITWEQDG 540 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC--CCCcccCceEEEECC
Confidence 579999999999998876543 34332111 1233 3456799999999999999999986 444433 5666777
Q ss_pred CEEEE
Q psy2083 126 GMMFI 130 (248)
Q Consensus 126 gll~s 130 (248)
.+.++
T Consensus 541 ~qYv~ 545 (582)
T 1flg_A 541 EQYLG 545 (582)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 64443
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.048 Score=46.33 Aligned_cols=123 Identities=7% Similarity=0.010 Sum_probs=74.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+| .+|+.+-.+..+ ...+.+++..+ +|.+.+++.++ .|..+|. +++.++..... ...+.++.+.+++
T Consensus 200 ~d-~~g~~~~~~~~~-~~~~~~~~~~~-~g~l~v~t~~~--------gl~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~g 266 (330)
T 3hxj_A 200 IN-PDGTEKWNFYAG-YWTVTRPAISE-DGTIYVTSLDG--------HLYAINP-DGTEKWRFKTG-KRIESSPVIGNTD 266 (330)
T ss_dssp EC-TTSCEEEEECCS-SCCCSCCEECT-TSCEEEEETTT--------EEEEECT-TSCEEEEEECS-SCCCSCCEECTTS
T ss_pred EC-CCCcEEEEEccC-CcceeceEECC-CCeEEEEcCCC--------eEEEECC-CCCEeEEeeCC-CCccccceEcCCC
Confidence 45 456655555443 24455555554 44566665554 5777774 55565554332 1234456666555
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+++.++.|..+|. +|+.+..+... ...+++++..++|. |.+++.++.+.....+.
T Consensus 267 ~l~v~t~~ggl~~~d~-~g~~~~~~~~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 267 TIYFGSYDGHLYAINP-DGTEKWNFETG-SWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEEEECTTCEEEEECT-TSCEEEEEECS-SCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred eEEEecCCCCEEEECC-CCcEEEEEEcC-CccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 45566767888897 68888777752 45677777777765 56788899888775443
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.017 Score=55.44 Aligned_cols=78 Identities=6% Similarity=-0.065 Sum_probs=52.6
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
+|.|..||+++++.++...+. .++.+..+. .++ ++++.|+.|..||.++|+.+.+++. ...+. -+.+.++|
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~--~~~~~~~p~~~~~~G 518 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM--PSGGIGSPMTYSFKG 518 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC--CCCcEeeeEEEEECC
Confidence 579999999999998876554 344433222 233 4456789999999999999999986 23332 23445677
Q ss_pred CEEEEEe
Q psy2083 126 GMMFIAN 132 (248)
Q Consensus 126 gll~sa~ 132 (248)
.++++..
T Consensus 519 ~~yv~~~ 525 (571)
T 2ad6_A 519 KQYIGSM 525 (571)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6554443
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.026 Score=54.12 Aligned_cols=52 Identities=6% Similarity=-0.040 Sum_probs=41.5
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..||..+|+.+-++.. ..++.+..+...++++++++.|+.+..++...
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 47899999999999888875 44555545556788999999999999999654
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.042 Score=52.93 Aligned_cols=51 Identities=4% Similarity=0.018 Sum_probs=39.7
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|.-||+.+|+.+-+... ..+++.-.+...++++|+|+.|+.++.|+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE--HLPLWAGVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEECCCCCEEEEecC--CCCCcccceEeCCCEEEEECCCCcEEEEECC
Confidence 57899999999999877765 3444443444568899999999999999864
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.088 Score=45.50 Aligned_cols=110 Identities=6% Similarity=0.040 Sum_probs=69.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCC-CCCCeeEEEEcC-Cc-e-eee-C------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHM-YGLPIRDIKFHD-NY-V-LSM-D------ 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~-~~~pI~sI~F~~-d~-l-~Ss-d------ 90 (248)
.+..+++.+++|.++.+.... .|..+|..++.. +.....+ .-...+.|.+.+ ++ + ++. .
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~--------~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYY--------HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDR 152 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTT--------EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTT
T ss_pred CCceEEEcCCCCcEEEEECCC--------CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccc
Confidence 456777776556677665544 478888776532 2111111 012368899999 77 2 322 1
Q ss_pred -----------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 91 -----------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 91 -----------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
++.|-.||..+++....... ....|.++++||++.|+++ ....+|..|++.
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 25688899887765443333 3556789999999977666 456899999865
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.55 Score=40.91 Aligned_cols=126 Identities=10% Similarity=-0.001 Sum_probs=77.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC----CceeEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA----DKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs----~~pl~~~~h~~~~pI~sI~F 81 (248)
++..++.....+... .....+.+.++++.++.+.... +.|..+|+.. .........+. .....|++
T Consensus 15 i~~~~~~~~~~~~~~--~~p~g~~~d~~~~~ly~~D~~~-------~~I~~~~~~g~~~~~~~~~~~~~~~-~~p~glav 84 (316)
T 1ijq_A 15 MTLDRSEYTSLIPNL--RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAV 84 (316)
T ss_dssp EETTSCCCEEEECSC--SSEEEEEEETTTTEEEEEETTT-------TEEEEEEC--------CEEEECSSC-SCCCEEEE
T ss_pred EECCCcceEehhcCC--CceEEEEEEeCCCEEEEEECCC-------CcEEEEECCCCCCCcccEEEEeCCC-CCcCEEEE
Confidence 444445544444443 5678899998888888776554 4899999986 22222222221 23478999
Q ss_pred cCC-c-eee--eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 82 HDN-Y-VLS--MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 82 ~~d-~-l~S--sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
++. + |.- +..+.|.+.|.+.......+.. .....+++++.|.++.|+.+... ++|..++.
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 864 3 433 4577899999874333333333 14678999999988877777654 56766653
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.11 Score=50.65 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=42.1
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|.-||..||+.+-.+.. ..+.....+...++++|+++.|+.++.|+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 47899999999999888775 4555555667789999999999999999864
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.095 Score=50.87 Aligned_cols=110 Identities=11% Similarity=0.127 Sum_probs=67.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc---eeee-C---CCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY---VLSM-D---SSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d---d~~ 93 (248)
..+.++.++||+..++.+...+ +....|.++|+.++ .+.....+. ..+... +++++ ++.+ . ...
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~----~~~~~i~~~d~~~~~~~~~~l~~~~--~~~~~~-~~~~g~~l~~~t~~~~~~~~ 306 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANS----TSGNRLYVKDLSQENAPLLTVQGDL--DADVSL-VDNKGSTLYLLTNRDAPNRR 306 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESS----SSCCEEEEEETTSTTCCCEEEECSS--SSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred eEEEEEEEcCCCCEEEEEEccC----CCCcEEEEEECCCCCCceEEEeCCC--CceEEE-EeccCCEEEEEECCCCCCCE
Confidence 4577888999888776544332 12348999999887 333333333 334444 44333 3333 2 357
Q ss_pred EEEEECCCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEe-CCC--eEEEEEc
Q psy2083 94 VKIWSKDNGSL--FTCIESGDQTQFNNLCHIPESGMMFIAN-ENK--KILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~-ed~--~I~~w~I 142 (248)
|..||..+++. ++.+.++ ...+. .|+|+++.|+... +++ +|.+|++
T Consensus 307 l~~~d~~~~~~~~~~~l~~~-~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPE-RQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEEEETTSCCGGGCEEEECC-CSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEEEeCCCCCccccEEEecC-CCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 88999998765 5567763 44443 8889887666554 454 5666654
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.13 Score=48.50 Aligned_cols=107 Identities=10% Similarity=0.230 Sum_probs=68.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----------ceeEE--ec-----CCCCCCeeEEEEcCCc-
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----------KPLRV--KD-----HMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----------~pl~~--~~-----h~~~~pI~sI~F~~d~- 85 (248)
.|..+..+|+|.+|+..|.. +|.+-++-.+ .++.. +. .....+|.++.|||-+
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~---------~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~ 137 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN---------EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY 137 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS---------EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBG
T ss_pred ceeEEEECCCCCEEEEecCC---------eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccC
Confidence 56778888876666666655 4666665422 11111 11 1124789999999975
Q ss_pred -----eeeeCCCeEEEEECCCC--CEEEEee-------c-CCCCCeeEEEEeCCCCEEEEEe--CCCeEEEE
Q psy2083 86 -----VLSMDSSVVKIWSKDNG--SLFTCIE-------S-GDQTQFNNLCHIPESGMMFIAN--ENKKILTY 140 (248)
Q Consensus 86 -----l~Ssdd~~IKIWD~~tG--k~~~tie-------~-~h~~~In~l~~~pdsgll~sa~--ed~~I~~w 140 (248)
|+=.+|++||+||.... ++. .+. . .+...|.++||.+++=.|.+.+ ++|.|...
T Consensus 138 ~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 138 RDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp GGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 44468889999999862 222 221 1 0236899999999876677766 88888765
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.24 Score=45.61 Aligned_cols=130 Identities=13% Similarity=0.087 Sum_probs=74.5
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCC-eeEEEEcCCCcee--EEecCCCCCCeeEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP-AFYLYDIRADKPL--RVKDHMYGLPIRDIK 80 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G-~V~LwDlRs~~pl--~~~~h~~~~pI~sI~ 80 (248)
+.++...+........ ......+++.+++..++.+...++ ... .+..++ +.+... ...... .....|+
T Consensus 162 ~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~-~~g~~~~~~~l~~~--~~p~gia 232 (430)
T 3tc9_A 162 RLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNN----NDRPNNYILT-RESGFKVITELTKG--QNCNGAE 232 (430)
T ss_dssp EEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEE-GGGTSCSEEEEEEC--SSCCCEE
T ss_pred EEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEe-CCCceeeeeeeccC--CCceEEE
Confidence 3466655554444443 356788999998776776655321 001 233334 333211 111111 2347889
Q ss_pred EcC-Cc-eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 81 FHD-NY-VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 81 F~~-d~-l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
++| ++ |.-+ ..+.|..+|..++..............+.++|+|+|..|+.+. ...+|..++.
T Consensus 233 vdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 233 THPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp ECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 999 55 4433 5678999999866542222221134578999999999555554 5678888764
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.32 Score=44.49 Aligned_cols=165 Identities=15% Similarity=0.224 Sum_probs=96.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCC---CC----cEEEeecC--ceeeeecCCeeEEEEcC-CCceeEEecC---C-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPE---SG----MMFIANEN--KKILTYYIPAFYLYDIR-ADKPLRVKDH---M- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~---~g----~l~~ag~d--~~~~~~~~G~V~LwDlR-s~~pl~~~~h---~- 71 (248)
+|. +|++++.+..+ .+|++..-|. +| +.+++..+ . .+|.+|++. ..+++..... .
T Consensus 55 ydl-~G~~l~~~~~g---~~nnVD~r~~~~l~g~~~dla~as~R~~~~-------n~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 55 YSL-DGKMLHSYNTG---KLNNVDIRYDFPLNGKKVDIAAASNRSEGK-------NTIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp EET-TSCEEEEECCS---CEEEEEEEEEEEETTEEEEEEEEEECSTTC-------CEEEEEEECTTTCCEEECSCTTSCE
T ss_pred EcC-CCcEEEEccCC---CcccEEEecccccCCceEeEEEEeCCCCCC-------CeEEEEEECCCCCceeeccccccCc
Confidence 455 89999998753 5777776662 11 12333333 2 489999883 3334444321 0
Q ss_pred -CC-CCeeEEEE--cCC-c----eeeeCCCeEEEEEC---C----CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 72 -YG-LPIRDIKF--HDN-Y----VLSMDSSVVKIWSK---D----NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 72 -~~-~pI~sI~F--~~d-~----l~Ssdd~~IKIWD~---~----tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
-+ ..+..+++ ++. + +++..++.+..|++ . +++.+.+|.. ...+-.+.+.+..+.|+++-|+.
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEecccc
Confidence 11 33556777 553 2 44556788888887 2 3467788887 56788888999999999999997
Q ss_pred eEEEEEcC-CCCCCCC--ccccccchhhhhhcccccccc-C----CceeecHhHHhhcC
Q psy2083 136 KILTYYIP-SLGPAPK--WCGFLDNLTEELEENIIENVY-D----DYKFVTRQELEDLG 186 (248)
Q Consensus 136 ~I~~w~Ip-~lG~aP~--wcs~ld~~tee~e~~~~~~~y-d----~y~fvt~~~l~~l~ 186 (248)
-|..|+.. .-+..++ .+--...++.+.| .-++| . .|-|++.+.-..+.
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvE---GLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIE---GLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEE---EEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcc---eEEEEecCCCCEEEEEEcCCCCEEE
Confidence 66665532 2112211 1111334444333 23354 3 47888876664443
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.21 Score=48.40 Aligned_cols=60 Identities=8% Similarity=-0.025 Sum_probs=43.4
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcccc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGF 154 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ 154 (248)
.+.|.-||+.+|+.+-.... ..+..+-.+...++++|.++.|+.++.|+... | ...|-..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t-G-~~lW~~~ 511 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDT-G-DLLWKFK 511 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTT-C-CEEEEEE
T ss_pred cCeEEEEECCCCCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCC-C-CEEEEee
Confidence 46899999999999887764 33444333445789999999999999999755 2 2346543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.35 Score=41.62 Aligned_cols=110 Identities=11% Similarity=0.015 Sum_probs=67.1
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc---eeeeC--------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY---VLSMD-------- 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-------- 90 (248)
..+.+++.|++..++.+.... +.|..||+.... ......... . -..|++.+++ ++...
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~-------~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLS-------HQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGG-------TEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred cCcceEECCCCCEEEEEeCCC-------CeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCCEEEEecCcccccccC
Confidence 456788888777666654432 389999998531 111111121 2 5779999987 33323
Q ss_pred --CCeEEEEECCCCCEEEEeecCC---CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 --SSVVKIWSKDNGSLFTCIESGD---QTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 --d~~IKIWD~~tGk~~~tie~~h---~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+.|..+|.. |+.+..+.... ...+.++++ .++.+.++......|..+.+..
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 3567788875 88888887411 134667776 4555555555678899988654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.88 Score=38.96 Aligned_cols=121 Identities=14% Similarity=0.177 Sum_probs=71.8
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-ee
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VL 87 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~ 87 (248)
...+.++.|..+ .....+++.+++ .++.+.... +.|..||.... ........ .....|+|.+++ +.
T Consensus 20 ~~~~~~~~~p~~--~~pegia~~~~g-~lyv~d~~~-------~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~ 86 (306)
T 2p4o_A 20 APAKIITSFPVN--TFLENLASAPDG-TIFVTNHEV-------GEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLV 86 (306)
T ss_dssp CCEEEEEEECTT--CCEEEEEECTTS-CEEEEETTT-------TEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEE
T ss_pred CCceEeEeCCCC--CCcceEEECCCC-CEEEEeCCC-------CeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEE
Confidence 345677777654 456788888854 466655433 48999998764 33222222 457899999987 33
Q ss_pred eeC--C-C-eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMD--S-S-VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssd--d-~-~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-++ . + .|-.+|..+|+.............+.+++.+++.++++-..++.|..++.
T Consensus 87 vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 332 2 2 35556878888644333211234567777665544444335777777764
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.6 Score=40.40 Aligned_cols=109 Identities=13% Similarity=0.242 Sum_probs=72.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---CCceeEEecC------CCCCCeeEEEEcCCc----eee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---ADKPLRVKDH------MYGLPIRDIKFHDNY----VLS 88 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---s~~pl~~~~h------~~~~pI~sI~F~~d~----l~S 88 (248)
....-.+++.|.++.++++.+.+ ...||.++ .+..+.+.++ ..-..+.+|+|+|.. ++|
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~--------p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKN--------PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESS--------SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcC--------CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEE
Confidence 34568999999888888877764 34455443 1122332211 011346899999985 777
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCC--------CCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQ--------TQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~--------~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
..++.+-+.|.+ |+++..+.-... .....++|.|+|. |++.||...+..|
T Consensus 192 ~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 192 HESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRF 249 (255)
T ss_dssp TTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEE
T ss_pred CCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEE
Confidence 788899899976 887777654101 2457899999997 6666988876665
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.14 Score=50.36 Aligned_cols=113 Identities=6% Similarity=0.017 Sum_probs=65.6
Q ss_pred CeeEEEEe-CCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc---eeeeCC-----Ce
Q psy2083 24 QFNNLCHI-PESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY---VLSMDS-----SV 93 (248)
Q Consensus 24 ~V~~~~~~-~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd-----~~ 93 (248)
.+....++ ||+..++-+.+.+ |+...+|.++|+.++ +.+.. +- .....++.|+||+ +.++.+ ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~---G~~~~~l~v~dl~~g~~~l~~--~~-~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS---GNEVYTIEFKRISDPSQTIAD--KV-SGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS---SSSCEEEEEEETTCTTCCCCC--CE-EEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCC---CCceEEEEEEECCCCCEeCCc--cc-cCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 46678889 8877665433321 111236999999998 63211 10 0113568899997 334432 36
Q ss_pred EEEEECCCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEc
Q psy2083 94 VKIWSKDNGSL--FTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~I 142 (248)
|..|++.++.. ...++..+..-..++.++|||..|+..+.+ ..|.++++
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 88889887642 233332113345578999999877766532 34444444
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=95.26 E-value=1.1 Score=39.46 Aligned_cols=142 Identities=12% Similarity=0.028 Sum_probs=85.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIWD 98 (248)
....+++.+.++.++.+.... +.|.++|+............- ..-+.|+++|.. +.-+| ...|...+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~-------~~I~~~~~dG~~~~~l~~~~~-~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSET-------NRIEVSNLDGSLRKVLFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CccEEEEEcCCCeEEEEECCC-------CEEEEEECCCCcEEEEEeCCC-CCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 345677776677766654433 489999987653322222221 345899999864 44444 46777777
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchhh-hhhccccccccCCcee
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLTE-ELEENIIENVYDDYKF 176 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~te-e~e~~~~~~~yd~y~f 176 (248)
.+ |+....+-...-...|.++++|+++.|+.+. ...+|..++.. | +....+.+ .+.....-++++++-|
T Consensus 152 ~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d--G------~~~~~~~~~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 152 MD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--G------TNRQAVVKGSLPHPFALTLFEDILY 222 (318)
T ss_dssp TT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--S------CSCEEEECSCCSCEEEEEEETTEEE
T ss_pred cC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC--C------CceEEEecCCCCCceEEEEeCCEEE
Confidence 76 5544444321145679999999888777775 45788888764 2 22222222 3333334567888999
Q ss_pred ecHhHH
Q psy2083 177 VTRQEL 182 (248)
Q Consensus 177 vt~~~l 182 (248)
+|...-
T Consensus 223 wtd~~~ 228 (318)
T 3sov_A 223 WTDWST 228 (318)
T ss_dssp EEETTT
T ss_pred EEecCC
Confidence 985443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.22 E-value=1.1 Score=40.29 Aligned_cols=111 Identities=7% Similarity=-0.001 Sum_probs=71.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD 98 (248)
.....+.+.+.++.++.+.... +.|..+|+..+........+- .....|++.+.. |.- +..+.|.+.+
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~-------~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTL-------DRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCCEEEEECSSC-SCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CccEEEEEecCCCeEEEEeCCC-------CcEEEEecCCCCcEEEEeCCC-CCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 5677899998888888765544 489999998765433332221 234678888643 433 3467888888
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.......+.. .....+.+++.|.++.|+.+... ++|..++.
T Consensus 188 ~dg~~~~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 188 LDGAHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp TTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCceEEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 874333333333 14678999999988877777643 56666653
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.78 E-value=2 Score=37.93 Aligned_cols=145 Identities=13% Similarity=0.052 Sum_probs=86.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.+.|+............ -..-+.|+++|.. +.-+| . +.|...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~-------~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCC-------CeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 3456788877777776654443 37999998765322222211 1335899999854 44443 3 667778
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccch-hhhhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNL-TEELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~-tee~e~~~~~~~yd~y~ 175 (248)
|.+ |.....+-...-...|.+++.|+++.|+.+.. .++|..++.. |.. ...+ ...+.....-++++++-
T Consensus 188 ~~d-G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d--G~~------~~~~~~~~~~~P~giav~~~~l 258 (349)
T 3v64_C 188 SMD-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSH------RKAVISQGLPHPFAITVFEDSL 258 (349)
T ss_dssp ETT-SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCS------CEEEECSSCSSEEEEEEETTEE
T ss_pred eCC-CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC--CCc------eEEEEeCCCCCceEEEEECCEE
Confidence 876 54444442211456899999998887777764 4678888753 211 1111 12233334456688999
Q ss_pred eecHhHHhh
Q psy2083 176 FVTRQELED 184 (248)
Q Consensus 176 fvt~~~l~~ 184 (248)
|+|...-..
T Consensus 259 y~td~~~~~ 267 (349)
T 3v64_C 259 YWTDWHTKS 267 (349)
T ss_dssp EEEETTTTE
T ss_pred EEecCCCCe
Confidence 998554433
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.62 Score=45.10 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=48.8
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeE--EEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRD--IKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~s--I~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
.|.+.-||+++++.++...+. .|+.+ +.-..+. .+++.|+.++.+|.+||+.+-+++. ...+. -+.+..||
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l--~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI--PSGAIGYPMTYTHKG 527 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC--CCCcEeccEEEEeCC
Confidence 479999999999998876544 33332 2212222 4456799999999999999998875 22222 24555677
Q ss_pred CE
Q psy2083 126 GM 127 (248)
Q Consensus 126 gl 127 (248)
.+
T Consensus 528 ~q 529 (599)
T 1w6s_A 528 TQ 529 (599)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.72 E-value=1.3 Score=38.24 Aligned_cols=114 Identities=14% Similarity=0.183 Sum_probs=77.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD 98 (248)
.+++..+++.|+++.|+++++.+ +.|...|+. ++.+....-.-....-.|++.+++ +++. .++.+-+.+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~-------~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKP-------AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETT-------EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ccCcceeEEeCCCCEEEEEECCC-------CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 35789999999888888876665 489999998 665554321111346788888877 4554 356777877
Q ss_pred CCCCC---EEEEeec-----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 99 KDNGS---LFTCIES-----GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 99 ~~tGk---~~~tie~-----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
..... .+..+.. ......-.+++.|+++.|+++++.....+|-+.
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 65433 2233321 013445789999999999999988776777665
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.66 E-value=1.5 Score=39.40 Aligned_cols=143 Identities=14% Similarity=0.073 Sum_probs=84.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIWD 98 (248)
....+++.+.++.|+.+.... +.|.+.|+...........+- ..-+.|+++|.. |.-+| . +.|...|
T Consensus 160 ~p~glavd~~~g~lY~~d~~~-------~~I~~~~~dg~~~~~l~~~~l-~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTT-------TEEEECBTTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CccEEEEEeCCCeEEEEcCCC-------CeEEEEeCCCCceEEeecCCC-CCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 456777777777776654443 378888887553322222221 245899999864 44443 3 6677788
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceee
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFV 177 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fv 177 (248)
.+ |.....+-...-...|.++++|+++.|+.+.. ..+|..+++. |...+ .+ +.+.+.....-++++++-|+
T Consensus 232 ~d-G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~--~~---~~~~~~~P~giav~~~~ly~ 303 (386)
T 3v65_B 232 MD-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSHRK--AV---ISQGLPHPFAITVFEDSLYW 303 (386)
T ss_dssp TT-SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT--SCSCE--EE---ECSSCSSEEEEEEETTEEEE
T ss_pred CC-CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC--CCeeE--EE---EECCCCCceEEEEECCEEEE
Confidence 76 44444443211456899999998887777764 4678888753 21110 11 11223333345668899999
Q ss_pred cHhHH
Q psy2083 178 TRQEL 182 (248)
Q Consensus 178 t~~~l 182 (248)
|...-
T Consensus 304 td~~~ 308 (386)
T 3v65_B 304 TDWHT 308 (386)
T ss_dssp EETTT
T ss_pred eeCCC
Confidence 86443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=94.66 E-value=2.4 Score=38.28 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=89.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+............ ...-+.|+++|.. |.-+| ...|...
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~-------~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCcccEEEEecCCceEEEECCC-------CeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 4566778777677777665443 48999999876443332222 1335899999854 54444 3578888
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh---hhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE---ELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te---e~e~~~~~~~yd~ 173 (248)
+.+ |.....+-...-...|.+++.|+++.|+.+.. ..+|..+++.. +....+.+ .+.....-+++++
T Consensus 231 ~~d-G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG--------~~~~~~~~~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 231 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--------GNRKTILEDEKRLAHPFSLAVFED 301 (400)
T ss_dssp ETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------CCCEEEEECSSTTSSEEEEEEETT
T ss_pred eCC-CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC--------CccEEEEeCCCCCCCCEEEEEeCC
Confidence 876 54444443211467899999999888888864 46888887542 12222222 2333334567889
Q ss_pred ceeecHhHHhh
Q psy2083 174 YKFVTRQELED 184 (248)
Q Consensus 174 y~fvt~~~l~~ 184 (248)
+-|+|...-..
T Consensus 302 ~lywtd~~~~~ 312 (400)
T 3p5b_L 302 KVFWTDIINEA 312 (400)
T ss_dssp EEEEEESSSCS
T ss_pred EEEEecCCCCe
Confidence 99998644333
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=2.4 Score=41.06 Aligned_cols=145 Identities=10% Similarity=0.025 Sum_probs=90.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+..+.........- ..-+.|+++|. + +.-+| ...|...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~-------~~I~v~~~dG~~~~~l~~~~l-~~P~~iavdp~~G~lY~tD~g~~~~I~r~ 151 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGT-------NRIEVSKLDGQHRQVLVWKDL-DSPRALALDPAEGFMYWTEWGGKPKIDRA 151 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSTTCEEEECSSC-CCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCC-------CEEEEEecCCCcEEEEEeCCC-CCcccEEEccCCCeEEEeCCCCCCEEEEE
Confidence 3466788877777777665543 489999987653322221221 23489999985 4 55454 4567777
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCcee
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKF 176 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~f 176 (248)
+.+ |.....+-.+ -...+.+++.++++.|+.+.. ...|..+++.. .. ..-+.+.+.+.-.-++++++-|
T Consensus 152 ~~d-G~~~~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG--~~------~~v~~~~l~~P~glav~~~~ly 221 (628)
T 4a0p_A 152 AMD-GSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG--LN------REVIADDLPHPFGLTQYQDYIY 221 (628)
T ss_dssp ETT-SCSCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS------CEEEEECCSCEEEEEEETTEEE
T ss_pred eCC-CCceEEEECC-CCCcceEEEccccCEEEEEECCCCEEEEEcCCC--Cc------eEEeeccCCCceEEEEECCEEE
Confidence 776 4444443331 578899999999888888865 46788887642 21 1222233443345677899999
Q ss_pred ecHhHHhhc
Q psy2083 177 VTRQELEDL 185 (248)
Q Consensus 177 vt~~~l~~l 185 (248)
+|...-..+
T Consensus 222 ~tD~~~~~I 230 (628)
T 4a0p_A 222 WTDWSRRSI 230 (628)
T ss_dssp EEETTTTEE
T ss_pred EecCCCCEE
Confidence 996544333
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.47 E-value=2.4 Score=37.43 Aligned_cols=111 Identities=8% Similarity=0.017 Sum_probs=71.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD 98 (248)
.....+.+.+.++.++.+.... +.|..+|+..+........+- .....|++.+.. |.- +..+.|.+.+
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~-------~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTL-------DRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEEeccccEEEEEeccC-------CceEEEecCCCCceEEEeCCC-CCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 4567888888888888765543 489999998765433332221 234688998643 433 3467899999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+ |+....+....-...+++++.|.++.|+.+... ++|..++.
T Consensus 145 ~d-G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 145 LD-GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp TT-SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CC-CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 87 443333332124678999999987777766543 56766654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=94.34 E-value=0.22 Score=42.78 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=61.8
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cce--eEEecCCCCCCeeEEEEcCCc-eeee--CCCeEEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKP--LRVKDHMYGLPIRDIKFHDNY-VLSM--DSSVVKIWS 98 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~p--l~~~~h~~~~pI~sI~F~~d~-l~Ss--dd~~IKIWD 98 (248)
.+.+ +++++.++.+.... +.|..||+.. ++. ....... ..-..+++++++ +..+ ..+.|.++|
T Consensus 171 pngi--s~dg~~lyv~d~~~-------~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEK-------MLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp EEEE--EEETTEEEEEETTT-------TEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred CCCc--CcCCCEEEEEeCCC-------CEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 3444 66666676665543 4899999875 321 1111111 234678899887 3333 467888999
Q ss_pred CCCCCEEE--EeecCCCCCeeEEEEe---CCCCEEEEEeCCC
Q psy2083 99 KDNGSLFT--CIESGDQTQFNNLCHI---PESGMMFIANENK 135 (248)
Q Consensus 99 ~~tGk~~~--tie~~h~~~In~l~~~---pdsgll~sa~ed~ 135 (248)
.. |+... .+... ....++++|. ||++.|++++..+
T Consensus 240 ~~-G~~~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 240 PD-RSTTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TT-CCEEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CC-CCEEEEeecccc-cCCceEEEEecccCCCCEEEEECCCC
Confidence 86 77643 34431 3568899998 8988888877543
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=94.27 E-value=1.5 Score=38.23 Aligned_cols=115 Identities=14% Similarity=0.209 Sum_probs=68.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC---CCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH---MYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h---~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
..+..+.+.+++ .+++++.++ .+++++...++-...... ..+..+.+|.|.++. ++.+.++.| .+
T Consensus 205 ~~~~~~~~~~~g-~~~~~~~~G--------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~ 274 (327)
T 2xbg_A 205 RRLHNMGFTPDG-RLWMIVNGG--------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LC 274 (327)
T ss_dssp SCEEEEEECTTS-CEEEEETTT--------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EE
T ss_pred CccceeEECCCC-CEEEEeCCc--------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EE
Confidence 355666666644 455555553 566553211221111110 112458899998766 555667777 67
Q ss_pred ECCCCCEEEEeecC--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 98 SKDNGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 98 D~~tGk~~~tie~~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
..+.|+..+.+... .+..+.++.|.++ +.+++++.++.|..+.- ..-++|
T Consensus 275 S~DgG~tW~~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~~-~~~~~~ 326 (327)
T 2xbg_A 275 SQDGGQTWQQDVDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYVT-DLTAAP 326 (327)
T ss_dssp ESSTTSSCEECGGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEECC-CCTTC-
T ss_pred eCCCCcccEEcCccCCCCCCeEEEEEECC-CceEEEcCCceEEEEcC-cccCCC
Confidence 77778888877621 1357889999754 45777888998887753 444444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=93.74 E-value=0.69 Score=42.44 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=64.6
Q ss_pred CeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCC-----CeEE
Q psy2083 24 QFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDS-----SVVK 95 (248)
Q Consensus 24 ~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd-----~~IK 95 (248)
....+++.| +++.|+.+.... .|+.+|+..+........ ...-..|+|++++ |..++. +..-
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~--------~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~~~~~v 207 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQH--------PTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNNNDRPNN 207 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTE--------EEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSCTTSEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCC--------cEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCCcccceE
Confidence 346778887 467777775543 799999987654333222 2456899999986 444432 1122
Q ss_pred EEECCCCCEE--EEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 96 IWSKDNGSLF--TCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~--~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+|...+|... ..+.. ....+++++.|+.+.|+.+ ..+++|..|+.
T Consensus 208 ~~~~~~g~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 208 YILTRESGFKVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp EEEEGGGTSCSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred EEEeCCCceeeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 3333444432 34433 3456788999944444544 46678888874
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=93.71 E-value=3.1 Score=35.96 Aligned_cols=143 Identities=13% Similarity=0.047 Sum_probs=86.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.++|+............ ...-+.|+++|.. +.-+| . +.|...
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCC-------CEEEEEeCCCCceEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 3456777776677776654433 48999998765332222211 1345899999854 43332 2 577777
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchh---hhhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLT---EELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~t---ee~e~~~~~~~yd~ 173 (248)
+.+ |+....+-...-...|.+++.|+++.|+.+.. ..+|..++.. |. +...+. +.+..-..-+++++
T Consensus 149 ~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g~------~~~~~~~~~~~~~~P~giav~~~ 219 (316)
T 1ijq_A 149 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFED 219 (316)
T ss_dssp ETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SC------SCEEEEECTTTTSSEEEEEEETT
T ss_pred cCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--CC------ceEEEeecCCccCCcEEEEEECC
Confidence 775 66555553211457889999998888877764 4689888864 21 122221 12332234566789
Q ss_pred ceeecHhHH
Q psy2083 174 YKFVTRQEL 182 (248)
Q Consensus 174 y~fvt~~~l 182 (248)
+-|+|...-
T Consensus 220 ~ly~~d~~~ 228 (316)
T 1ijq_A 220 KVFWTDIIN 228 (316)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 999986543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.67 E-value=1.8 Score=39.70 Aligned_cols=131 Identities=8% Similarity=0.053 Sum_probs=73.4
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCC-eeEEEEcCCCce-eEEecCCCCCCeeEEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP-AFYLYDIRADKP-LRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G-~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F 81 (248)
+.+++.+|...+.... ......+++.+++. ++.+...+. .+. .+...+...+.. -...... ..-+.|++
T Consensus 165 ~~id~~~g~v~~~~~~--~~~P~giavd~dG~-lyVad~~~~----~~~~gv~~~~~~~~~~~~~~~~~~--~~P~giav 235 (433)
T 4hw6_A 165 RHVDFVNQYVDIKTTN--IGQCADVNFTLNGD-MVVVDDQSS----DTNTGIYLFTRASGFTERLSLCNA--RGAKTCAV 235 (433)
T ss_dssp EEEETTTTEEEEECCC--CSCEEEEEECTTCC-EEEEECCSC----TTSEEEEEECGGGTTCCEEEEEEC--SSBCCCEE
T ss_pred EEEECCCCEEEEeecC--CCCccEEEECCCCC-EEEEcCCCC----cccceEEEEECCCCeecccccccc--CCCCEEEE
Confidence 3466666665555443 35678999999877 665544210 000 133333322210 0111111 23467889
Q ss_pred cC-Cc-ee--eeCCCeEEEEECCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcC
Q psy2083 82 HD-NY-VL--SMDSSVVKIWSKDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIP 143 (248)
Q Consensus 82 ~~-d~-l~--Ssdd~~IKIWD~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip 143 (248)
++ ++ |. ...++.|..+|..+|.....+- .+....-+.++|+|+++.|+.+. ...+|..++..
T Consensus 236 d~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 236 HPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred eCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 98 55 33 3357789999999888734332 21122334699999999555555 55788887753
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=92.83 E-value=2.7 Score=38.29 Aligned_cols=111 Identities=14% Similarity=0.263 Sum_probs=69.2
Q ss_pred CCeeEEEE--eCCCCc--EEEeecCceeeeecCCeeEEEEcCC-------CceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 23 TQFNNLCH--IPESGM--MFIANENKKILTYYIPAFYLYDIRA-------DKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 23 ~~V~~~~~--~~~~g~--l~~ag~d~~~~~~~~G~V~LwDlRs-------~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
..+..+|. .|.++. +|+.+.+ |.+..|++.. .+.+..+.-+ ..+-.+...+.. |.-+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~--------G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE--------GEFEQYELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS--------SEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC--------CeEEEEEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCCeEEEe
Confidence 45677888 455553 5555555 4899999832 2444554443 567888888764 4444
Q ss_pred -CCCeEEEEECC-----CCCEEEEeecCCC-CCeeEEEEeCC--C-CEEEEEeC-CCeEEEEEcC
Q psy2083 90 -DSSVVKIWSKD-----NGSLFTCIESGDQ-TQFNNLCHIPE--S-GMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 90 -dd~~IKIWD~~-----tGk~~~tie~~h~-~~In~l~~~pd--s-gll~sa~e-d~~I~~w~Ip 143 (248)
.+.-|--+|.+ +++.+..+..++- ..+-.|++.+. + ++|+++|+ +.++.+|+..
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 55555555644 3556666543112 47888999654 3 47777775 4689999873
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=92.54 E-value=1.6 Score=42.84 Aligned_cols=115 Identities=8% Similarity=0.067 Sum_probs=62.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEEEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVKIW 97 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IKIW 97 (248)
.+++|+||+..++.+..+.. .....|.++++.++. ...+..........++.|+||+ ++++ ....|.++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~---~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDET---LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp SCCEECSSTTEEEEEEECTT---CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eeEEEecCCCEEEEEEECCC---CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEE
Confidence 35678888766665544310 001268899998764 2333321212345688999998 3333 24468889
Q ss_pred ECCCCC-EE--EEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcC
Q psy2083 98 SKDNGS-LF--TCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYIP 143 (248)
Q Consensus 98 D~~tGk-~~--~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip 143 (248)
|..+++ .. ..+.++......++.|+.++.+++..+.+ +.-++|-++
T Consensus 301 d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 301 DLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp ESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEE
T ss_pred ECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEc
Confidence 998763 23 45544223344444444445556666554 444444443
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.97 E-value=9.7 Score=38.00 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=92.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+............ ....+.|+++|.. |.-+| ...|...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~-------~~I~v~~ldG~~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCC-------CeEEEEeCCCCeEEEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 4567788888787887765554 48999999865432222212 1346899999864 54444 3678888
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh---hhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE---ELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te---e~e~~~~~~~yd~ 173 (248)
+.+ |.....+-...-...+.|++.|.++.|+.+.. ..+|..+++- |. ....|.. .|...-.-+++.+
T Consensus 543 ~~d-G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d--G~------~~~~v~~~~~~l~~P~glav~~~ 613 (791)
T 3m0c_C 543 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFED 613 (791)
T ss_dssp ETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SC------SCEEEEECTTTTSSEEEEEEETT
T ss_pred ecC-CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC--CC------ceEEEecCCCccCCCCEEEEeCC
Confidence 886 55554443311467899999998888888864 4677777653 21 2222222 1222224467889
Q ss_pred ceeecHhHHhhc
Q psy2083 174 YKFVTRQELEDL 185 (248)
Q Consensus 174 y~fvt~~~l~~l 185 (248)
+-|+|......+
T Consensus 614 ~lYwtD~~~~~I 625 (791)
T 3m0c_C 614 KVFWTDIINEAI 625 (791)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999997665554
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=91.94 E-value=3.8 Score=37.02 Aligned_cols=90 Identities=11% Similarity=0.190 Sum_probs=61.4
Q ss_pred CeeEEEEcC---CCceeEEecC-------------CCCCCeeEEEEcCCc---eeeeCC-CeEEEEECCCCCEEEEeec-
Q psy2083 52 PAFYLYDIR---ADKPLRVKDH-------------MYGLPIRDIKFHDNY---VLSMDS-SVVKIWSKDNGSLFTCIES- 110 (248)
Q Consensus 52 G~V~LwDlR---s~~pl~~~~h-------------~~~~pI~sI~F~~d~---l~Ssdd-~~IKIWD~~tGk~~~tie~- 110 (248)
..|..||+. ++++++..+- .+ ...+.++..+++ |..+-. +.|-..|.+ |+.+..+..
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~ 177 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWE 177 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEEC
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeec
Confidence 479999999 8887765431 11 247899999987 544544 544444554 554444321
Q ss_pred ----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 111 ----GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 111 ----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
......|.+++.|||.+|+++..++++..+++.
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 012247899999999999999779999999976
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=91.93 E-value=4.4 Score=38.43 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=72.9
Q ss_pred ccchhcCceeEEEecC--CCCCeeEEEE-------eCCCCcEEEeecCceeeeecCCeeEEEEcCC-Ccee-----EEec
Q psy2083 5 ELRQDKGSLFTCIESG--DQTQFNNLCH-------IPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPL-----RVKD 69 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~--~~~~V~~~~~-------~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl-----~~~~ 69 (248)
.+|..++...+.+..+ .......++| .+++..++++...++- ......|.+.|-.. +... ....
T Consensus 166 ~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~~~~~~V~~i~r~~~G~~~~~~~~~~v~ 244 (496)
T 3kya_A 166 LIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-GDESPSVYIIKRNADGTFDDRSDIQLIA 244 (496)
T ss_dssp EEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-GGGEEEEEEEECCTTSCCSTTSCEEEEE
T ss_pred EEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-cccCceEEEEecCCCCceeecccceeec
Confidence 3566555544444332 0124688888 8877767766554200 00011466776333 1211 1111
Q ss_pred CCCCCCeeEEEEcCCc--eee--eCCCeEEEEECC-------CCCE--------------EEEeecCCCCCeeEEEEeCC
Q psy2083 70 HMYGLPIRDIKFHDNY--VLS--MDSSVVKIWSKD-------NGSL--------------FTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD~~-------tGk~--------------~~tie~~h~~~In~l~~~pd 124 (248)
.+. ..+.++++|+. |.- ..++.|..+|.+ +|+. +.++.. ......+||+|+
T Consensus 245 -~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~--~~~p~~ia~~p~ 320 (496)
T 3kya_A 245 -AYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD--PSWEFQIFIHPT 320 (496)
T ss_dssp -EES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS--SSCCEEEEECTT
T ss_pred -cCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC--CCCceEEEEcCC
Confidence 111 23578889953 333 357789999987 6654 222222 345678999999
Q ss_pred CCEEEEEe-CCCeEEEEE
Q psy2083 125 SGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 125 sgll~sa~-ed~~I~~w~ 141 (248)
|+.|+++. ...+|+.++
T Consensus 321 G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 321 GKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp SSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEe
Confidence 99666664 557888754
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=91.64 E-value=2 Score=41.25 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=54.7
Q ss_pred eeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCC
Q psy2083 53 AFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPES 125 (248)
Q Consensus 53 ~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pds 125 (248)
.+.+||+.+++. +............++++..++ ++++ ++..+.+||..+++ ...+.+ .....-.++++.+|+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~-W~~~~~~~~~R~~~s~~~~~dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS-WIPGPDMQVARGYQSSATMSDG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE-EEECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc-eeECCCCCccccccceEEecCC
Confidence 689999999853 222211111233457777766 5555 56689999998764 333322 001122356777899
Q ss_pred CEEEEEe-CC-----CeEEEEEc
Q psy2083 126 GMMFIAN-EN-----KKILTYYI 142 (248)
Q Consensus 126 gll~sa~-ed-----~~I~~w~I 142 (248)
.+++.|+ .+ ..+.+|+.
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEET
T ss_pred eEEEEeCcccCCcccccceEeCC
Confidence 9999998 34 56888875
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=91.60 E-value=6.1 Score=34.24 Aligned_cols=104 Identities=12% Similarity=0.154 Sum_probs=61.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
...+..+.+.|+ +.+++++..+. ..+-+|- .+=+++. ......+..+.+.+++ ++.+.++.+.++
T Consensus 162 ~~~~~~~~~~~~-~~~~~~g~~G~-------~~~S~d~gG~tW~~~~---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 162 IGVMRNLNRSPS-GEYVAVSSRGS-------FYSTWEPGQTAWEPHN---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp CCCEEEEEECTT-SCEEEEETTSS-------EEEEECTTCSSCEEEE---CCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CcceEEEEEcCC-CcEEEEECCCc-------EEEEeCCCCCceeECC---CCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 345677777775 44555555542 3344443 1112221 1223578899998887 556678888887
Q ss_pred ECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 98 SKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 98 D~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+.|+..+.+... +...+.++.+.|++.+++++. ++.|
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 65557766665420 123588899998877666555 5555
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=91.29 E-value=8 Score=34.78 Aligned_cols=111 Identities=9% Similarity=-0.036 Sum_probs=70.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCC-c-eee--eCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDN-Y-VLS--MDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d-~-l~S--sdd~~I 94 (248)
..+..+.|.+.++.++.+.... +.|..+|+... ......... -.....|++.+. + |.- +..+.|
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~-------~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEeeeeccCceEEEecCC-------CeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCCceEEEECCCCeE
Confidence 5788999998888888775543 38899998762 222222212 134678888863 3 443 346789
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.|.+.+.....+.. .-...+.+++.|.++.|+.+... ++|...+.
T Consensus 184 ~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp EEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred EEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 8999875444444443 14568899999988888777633 56666653
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=90.85 E-value=7.2 Score=37.93 Aligned_cols=106 Identities=13% Similarity=0.205 Sum_probs=64.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-------CCCCeeEEEEcCCc--eeeeCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-------YGLPIRDIKFHDNY--VLSMDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-------~~~pI~sI~F~~d~--l~Ssdd~~ 93 (248)
..|.+++..++ |.+..+..++ -+.+||..+++.... .+. ....|.+|...+++ .+++++ -
T Consensus 215 ~~i~~i~~d~~-g~lwigt~~~--------Gl~~~~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-G 283 (795)
T 4a2l_A 215 KQIQAILQQSP-TRIWVATEGA--------GLFLINPKTKEIKNY-LHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-D 283 (795)
T ss_dssp CCEEEEEEEET-TEEEEEEBSS--------CEEEEETTTTEEEEE-CCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-C
T ss_pred CeeEEEEEcCC-CCEEEEECCC--------CeEEEeCCCCeEEEe-ecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-h
Confidence 45666655553 4455554433 388899887643322 221 12469999998877 445555 5
Q ss_pred EEEEECCCCCEEEEeecC-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 94 VKIWSKDNGSLFTCIESG-------DQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|.+||..+++. ..+... ....|++++..++|. |.+|+.++-|..|+
T Consensus 284 l~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 284 LNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYH 336 (795)
T ss_dssp EEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEEC
T ss_pred hheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeC
Confidence 78999987654 444310 125689999888776 55677666666554
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=90.53 E-value=8.6 Score=34.04 Aligned_cols=110 Identities=11% Similarity=0.059 Sum_probs=62.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEec--CCCCCCeeEEEEcCC----c
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKD--HMYGLPIRDIKFHDN----Y 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~--h~~~~pI~sI~F~~d----~ 85 (248)
.+..+..+ -..-..++|.|++. ++++...+ .|+++| ..++ ++.... .........|+|+|+ +
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~-l~V~e~~g--------~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGR-YLVTERPG--------RLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTE-EEEEETTT--------EEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSC
T ss_pred EEEEEeCC-CCCCeEEEEcCCCe-EEEEeCCC--------EEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCC
Confidence 44445544 35678899998655 55554443 788887 3444 332211 111235789999997 3
Q ss_pred -e-ee-eC---C----CeEEEEECCCC--C------EEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 86 -V-LS-MD---S----SVVKIWSKDNG--S------LFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 86 -l-~S-sd---d----~~IKIWD~~tG--k------~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
| ++ +. + ..|-.|+...+ . .+..+........+.++|.|||.+.++-++
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 2 22 22 2 45666776543 1 122233211234678999999987776544
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=90.17 E-value=9.3 Score=33.65 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=60.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEec--CCCCCCeeEEEEcCC----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKD--HMYGLPIRDIKFHDN---- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~--h~~~~pI~sI~F~~d---- 84 (248)
.+..+..+ -..-..++|.|++. ++.+... |.|+++| .++ ++.... .........|+|+|+
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~-l~V~e~~--------g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGG-MLIAERP--------GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQE 89 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSC-EEEEETT--------TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTS
T ss_pred EEEEEECC-CCCceEEEEcCCCe-EEEEeCC--------CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCC
Confidence 34444443 34567899888765 5555444 3788888 443 222111 111235689999998
Q ss_pred c-e--eeeCC-----CeEEEEECCCCC------EEEEee--cCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 85 Y-V--LSMDS-----SVVKIWSKDNGS------LFTCIE--SGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 85 ~-l--~Ssdd-----~~IKIWD~~tGk------~~~tie--~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ | +.+.. ..|-.|+...++ .+..+. .+.....+.++|.|||.+.++-++
T Consensus 90 g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 90 PYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 3 3 22322 556667766442 122233 111234578999999977666543
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=89.67 E-value=9.3 Score=37.14 Aligned_cols=108 Identities=5% Similarity=0.058 Sum_probs=66.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC------CCCCeeEEEEcCCc--eeeeCCCeEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM------YGLPIRDIKFHDNY--VLSMDSSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI~sI~F~~d~--l~Ssdd~~IK 95 (248)
.|.++...+ .|.+-.+..++ -|..||..++.- ....+. ....|.++...+++ -++++++-|.
T Consensus 311 ~i~~i~~D~-~g~lWigt~~~--------Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~ 380 (795)
T 4a2l_A 311 SVRSIFMDS-QGGMWLGTYFG--------GLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLN 380 (795)
T ss_dssp CEEEEEECT-TSCEEEEESSS--------CEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEE
T ss_pred cEEEEEEeC-CcCEEEEECCC--------CeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeE
Confidence 455554444 45555555443 478888766532 222111 12468999988887 5566776788
Q ss_pred EEECCCCCEEEEeecC-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 96 IWSKDNGSLFTCIESG-------DQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 96 IWD~~tGk~~~tie~~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.||..+++...-.... ....|.+++..++|.+|.+|+.++-+..|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 381 LYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp EECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred EEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 9999877643322110 025688999888888577777766666665
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=89.62 E-value=5.5 Score=36.43 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=63.3
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEEC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWSK 99 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD~ 99 (248)
.+.+++.|++|.++.+.... +.|..+|..++.. ......+....-..|+|+|++ |.- ...+.|..+|.
T Consensus 230 P~giavd~~~G~lyv~d~~~-------~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHH-------AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp BCCCEECTTTCCEEECBTTC-------SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CCEEEEeCCCCeEEEEECCC-------CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 45677777677777665543 4899999987654 122222211222469999987 333 45678888775
Q ss_pred C--CCCE--EEEeec--C------------CCCCeeEEEE---------eCCCCEEEEEeCCCeEEEEE
Q psy2083 100 D--NGSL--FTCIES--G------------DQTQFNNLCH---------IPESGMMFIANENKKILTYY 141 (248)
Q Consensus 100 ~--tGk~--~~tie~--~------------h~~~In~l~~---------~pdsgll~sa~ed~~I~~w~ 141 (248)
+ ++.. ...+.+ + .-...+.+++ .++|.+.++-....+|+.++
T Consensus 303 d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 303 NRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp CTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 5 4432 122221 0 0123567999 55555555445567888775
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=89.60 E-value=7.8 Score=33.77 Aligned_cols=109 Identities=14% Similarity=0.124 Sum_probs=70.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCC-c-eeee--CCCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDN-Y-VLSM--DSSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d-~-l~Ss--dd~~IKIWD 98 (248)
.+..+.|.+.++.++-+.... +.|..+|+..+.. ......+- .....|++.+. + |.-+ ..+.|.+.|
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~-------~~I~r~~~~g~~~~~~~~~~~l-~~p~glavd~~~g~ly~~d~~~~~I~~~~ 107 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSE-------EAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDSETNRIEVSN 107 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTT-------TEEEEEETTSSSCCCEEEEECC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCC-------CcEEEEEccCCCceEEEEcCCC-CCccEEEEEcCCCeEEEEECCCCEEEEEE
Confidence 467788888778887765543 4899999987632 11111111 23567888864 3 4333 467899999
Q ss_pred CCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeC--CCeEEEEEc
Q psy2083 99 KDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANE--NKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~e--d~~I~~w~I 142 (248)
.+ |+....+. . .....+.+++.|.++.|+.+.. .++|...+.
T Consensus 108 ~d-G~~~~~l~~~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 108 LD-GSLRKVLFWQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp TT-SCSCEEEECS-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred CC-CCcEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence 87 44434443 3 2467899999998888887763 466666653
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.20 E-value=5.2 Score=37.92 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=68.0
Q ss_pred CeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC--CCCeeEEEE-------cCCc--eeeeCC
Q psy2083 24 QFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY--GLPIRDIKF-------HDNY--VLSMDS 91 (248)
Q Consensus 24 ~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~--~~pI~sI~F-------~~d~--l~Ssdd 91 (248)
....++|.| +.+.|+++.... +.|++.|+..+.......-+. -.....|+| ++++ +..+++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~-------~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGH-------KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETE-------EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEECCC-------CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 356788888 467788776654 279999999875433322111 113788999 8886 444432
Q ss_pred C--------eEEEEECCC-CCEE-----EEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 92 S--------VVKIWSKDN-GSLF-----TCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 92 ~--------~IKIWD~~t-Gk~~-----~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
. .|-+.+... |+.. ..+.. -...+.+++.|+++.|+.+ ..+++|..|++.
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCcccCceEEEEecCCCCceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 2 255666554 3321 23322 2345678999966665555 466789999864
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=88.92 E-value=3.1 Score=35.81 Aligned_cols=115 Identities=15% Similarity=0.234 Sum_probs=65.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-------EEecCCCCCCeeEEEEcCCc-eeeeCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-------RVKDHMYGLPIRDIKFHDNY-VLSMDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-------~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~I 94 (248)
..+..++|.| +|.|+++ .++ .+.-.|..+.... .+=..+... -..+.|++++ |..+.|+.|
T Consensus 41 ~~~~~laf~P-~G~LYaV-~~G--------~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV-LND--------KIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAVSKDKL 109 (236)
T ss_dssp TTCSEEEECT-TSCEEEE-ETT--------EEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEEETTEE
T ss_pred ccceeEEECC-CccEEEE-eCC--------eEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEeCCCEE
Confidence 4677899999 7778888 443 5555554442211 111111111 4889999998 444455777
Q ss_pred EEEECCC-CC-EE----EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 95 KIWSKDN-GS-LF----TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 95 KIWD~~t-Gk-~~----~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
-=|+.-+ +. .+ +.+-.+-=..+..|.|.|+|.+.++. |+++.-. .|..++-..|
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~-~~P~~~~~~w 169 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA-LPPVSNQDNW 169 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE-CCCSSTTCCH
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec-CCCCCCCccc
Confidence 5566522 21 11 11111001478899999999877766 7776544 3445666667
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=88.92 E-value=7.6 Score=35.00 Aligned_cols=114 Identities=13% Similarity=0.138 Sum_probs=65.7
Q ss_pred CeeEEEEeCC-CC--cEEEeecCceeeeecCCeeEEEEcCCC-ce---eEEecCCCCCCeeEEEEcCCc--eeeeC----
Q psy2083 24 QFNNLCHIPE-SG--MMFIANENKKILTYYIPAFYLYDIRAD-KP---LRVKDHMYGLPIRDIKFHDNY--VLSMD---- 90 (248)
Q Consensus 24 ~V~~~~~~~~-~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~-~p---l~~~~h~~~~pI~sI~F~~d~--l~Ssd---- 90 (248)
....+.++++ +| .|+++.... ..++|.||++... .. +....+..-...|++.+.+++ .++.+
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~-----~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPG-----SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFI 187 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECST-----TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCS
T ss_pred eeeeeEEEECCCCcEEEEEEECCC-----CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeC
Confidence 3455555552 22 366664431 2358888887654 21 222333322357889999887 33332
Q ss_pred C------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 91 S------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 91 d------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
| ..=+||-...++......+ -.-.|.++|+||+..|..+. ..++|..|++..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTTCCEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccccchhhccCCccEEEEEECCeEEEeecC--CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1 1223433333443333333 46789999999998877775 568999999853
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=88.34 E-value=0.88 Score=44.63 Aligned_cols=110 Identities=9% Similarity=-0.032 Sum_probs=66.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC----CceeEEecCCCCCCeeEEEEcCC-c-eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA----DKPLRVKDHMYGLPIRDIKFHDN-Y-VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs----~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ss--dd~~I 94 (248)
..+..+++.+.++.|+.+.... +.|+.+|+.. .........+. .....|++.+. + |.-+ ..+.|
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~-------~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~glavD~~~g~LY~tD~~~~~I 477 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIHSNIYWTDSVLGTV 477 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTT-------TSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSSSBCEECCTTTSCE
T ss_pred cceEEEccccccCeEEEEecCC-------CeEEEEecCCCCCCcceEEEEeCCC-CCcceEEEEeeCCcEEEEeccCCeE
Confidence 4567888888888888775543 4899999875 22211111111 12456888743 3 4433 46788
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEE
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYY 141 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~ 141 (248)
.+.|...+.....+.. .....+.+++.|.++.|+.+... ++|..++
T Consensus 478 ~v~d~dg~~~~~l~~~-~~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 478 SVADTKGVKRKTLFRE-QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp EEEBSSSCCEEEECCC-SSCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred EEEecCCCceEEEEeC-CCCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 9999874443333332 13567889999988877776543 5665554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=88.22 E-value=19 Score=34.60 Aligned_cols=146 Identities=11% Similarity=0.051 Sum_probs=88.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd---d~~IKIW 97 (248)
.....+++...++.|+.+.... +.|.+.++...........+- ..-++|+++|. + +.-+| ...|.-.
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~-------~~I~v~~~~G~~~~~l~~~~l-~~P~~iavdp~~G~ly~tD~g~~~~I~r~ 463 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGT-------DRIEVTRLNGTMRKILISEDL-EEPRAIVLDPMVGYMYWTDWGEIPKIERA 463 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECTTC-CSEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCceEEecccCcEEEEeCCC-------CcEEEEeCCCCeEEEEEECCC-CCeeeEEEEcCCCcEEEecCCCCCEEEEE
Confidence 4566788877777777765443 488998887653211222221 24589999986 4 54444 2455555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCCCCCCCCccccccchh-hhhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYIPSLGPAPKWCGFLDNLT-EELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~lG~aP~wcs~ld~~t-ee~e~~~~~~~yd~y~ 175 (248)
+.+ |.....+-...-...|.+++.++++.|..+... ++|..+++- |.. ...+. .++.+-..-++++|+-
T Consensus 464 ~~d-G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d--G~~------~~~~~~~~l~~P~glav~~~~l 534 (619)
T 3s94_A 464 ALD-GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD--GTG------RRVLVEDKIPHIFGFTLLGDYV 534 (619)
T ss_dssp ETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS--SCC------CEEEEECCCCSSCCEEEETTEE
T ss_pred ccC-CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC--CCc------eEEEeccCCCCcEEEEEECCEE
Confidence 554 554444432124678999999988888888654 678887763 222 11221 2333334457899999
Q ss_pred eecHhHHhhc
Q psy2083 176 FVTRQELEDL 185 (248)
Q Consensus 176 fvt~~~l~~l 185 (248)
|+|...-..+
T Consensus 535 y~tD~~~~~I 544 (619)
T 3s94_A 535 YWTDWQRRSI 544 (619)
T ss_dssp EEECTTSSCE
T ss_pred EEeecCCCeE
Confidence 9997655544
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.90 E-value=23 Score=35.26 Aligned_cols=111 Identities=9% Similarity=-0.024 Sum_probs=69.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~I 94 (248)
..+..+.+.+.++.|+.+.... +.|+.+++... ....+...+ -.....|++.+.+ |.-+ ..+.|
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~-------~~I~~~~l~g~~~~~~~~~vi~~~-l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTT-------TEEEEEEC--------CEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEeecccCCeeEEeeccc-------eeEEEEeccCCCCCcceeEEEecC-CCCcceeeeeecCCcEEEEecCCCeE
Confidence 5678888888778877665543 37888898753 222222212 1345688888654 4444 46789
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.|.+ |+...++-.......+.|++.|..+.|+.+... .+|...++
T Consensus 496 ~v~~ld-G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 496 SVADTK-GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp EEEETT-SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEeCC-CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 999987 444444432114578899999998888877643 56666554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=87.81 E-value=20 Score=34.42 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=86.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.+.|+............ ...-+.|+++|.. +.-+| ...|..-
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~-------~~I~v~~~dG~~~~~l~~~~-l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSET-------NRIEVSNLDGSLRKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSS-CSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCC-------CEEEEEECCCCCEEEEEeCC-CCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 4678899988888888776554 48999999865322222111 1235789999863 54444 3456555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh-hhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE-ELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te-e~e~~~~~~~yd~y~ 175 (248)
+.+ |.....+-...-...|.+++.|+++.|+.+.. ..+|..+++- |. +...+.+ .+.+-..-++++|+-
T Consensus 156 ~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d--G~------~~~~~~~~~~~~P~gi~~~~~~l 226 (619)
T 3s94_A 156 GMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--GT------NRQAVVKGSLPHPFALTLFEDIL 226 (619)
T ss_dssp ETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS--CC------EEC---------CCCEEESSSEE
T ss_pred ECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC--CC------ccEEEEeCCCCCceEEEEeCCEE
Confidence 665 55444443211467899999998888887764 4667777653 32 2223333 344444557788999
Q ss_pred eecHhHHhh
Q psy2083 176 FVTRQELED 184 (248)
Q Consensus 176 fvt~~~l~~ 184 (248)
|+|.-.-..
T Consensus 227 y~td~~~~~ 235 (619)
T 3s94_A 227 YWTDWSTHS 235 (619)
T ss_dssp EEECTTTCS
T ss_pred EEecCCCCE
Confidence 999654433
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=87.42 E-value=5.8 Score=41.35 Aligned_cols=109 Identities=11% Similarity=0.157 Sum_probs=65.4
Q ss_pred cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCceeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 50 YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 50 ~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
..|.|.+|++..++........-..+|.+|+=-...++.+-.+.|+|||....+.+. .+..+-..|..+.....+++|+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFIL 940 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEETTEEE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccCCEEE
Confidence 458999999976544333222224789998744445777777899999998766544 2220011232223333577888
Q ss_pred EEeCCCeEEEEEc-CCC--------CCCCCccccccchh
Q psy2083 130 IANENKKILTYYI-PSL--------GPAPKWCGFLDNLT 159 (248)
Q Consensus 130 sa~ed~~I~~w~I-p~l--------G~aP~wcs~ld~~t 159 (248)
+|.--.-|..+.. +.- -..|+|+.-.+-|.
T Consensus 941 vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld 979 (1158)
T 3ei3_A 941 VGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD 979 (1158)
T ss_dssp EEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEE
T ss_pred EEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEc
Confidence 8887666655432 211 35799976665553
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=85.75 E-value=3 Score=40.82 Aligned_cols=140 Identities=14% Similarity=0.060 Sum_probs=77.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEEECC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIWSKD 100 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIWD~~ 100 (248)
..+++.+.++.|+.+.... +.|.++|+...........+ ...-+.|+++|.. |.-++ .+.|...+..
T Consensus 456 ~glavD~~~g~LY~tD~~~-------~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCEECCCSSSBCEECCTTT-------SCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred ceEEEEeeCCcEEEEeccC-------CeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 4555555566666553332 48999998765433222211 1234788998864 44443 2567776665
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchh---hhhhccccccccCCcee
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLT---EELEENIIENVYDDYKF 176 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~t---ee~e~~~~~~~yd~y~f 176 (248)
|.....+-...-...|.|++.|+++.|+.+. ...+|..+++. |. ....+. ..+.....-+++.++-|
T Consensus 528 -G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d--G~------~~~~~~~~~~~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 528 -GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFEDKVF 598 (699)
T ss_dssp -SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS--SS------CCEEECCCSSSCSSCCCCEEETTEEE
T ss_pred -CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC--CC------ceEEEEecCCcCCCceEeEEECCEEE
Confidence 4433333211135678899999887777665 45688888753 21 111111 12222234466778888
Q ss_pred ecHhHH
Q psy2083 177 VTRQEL 182 (248)
Q Consensus 177 vt~~~l 182 (248)
+|...-
T Consensus 599 wtd~~~ 604 (699)
T 1n7d_A 599 WTDIIN 604 (699)
T ss_dssp EECSTT
T ss_pred EEeCCC
Confidence 886443
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=85.56 E-value=21 Score=33.49 Aligned_cols=98 Identities=9% Similarity=0.094 Sum_probs=65.9
Q ss_pred eeEEEEcCCCceeEEecCCC--CC-CeeEEEEcCCc--eeeeCCCeEEEEECCCCC------------EEEEeecC----
Q psy2083 53 AFYLYDIRADKPLRVKDHMY--GL-PIRDIKFHDNY--VLSMDSSVVKIWSKDNGS------------LFTCIESG---- 111 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~--~~-pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk------------~~~tie~~---- 111 (248)
.||.-++............+ .. .|..+..+|++ ++-..++.|.|-.+-.+. ...++.-+
T Consensus 42 ~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~ 121 (452)
T 3pbp_A 42 IIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEV 121 (452)
T ss_dssp EEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC-
T ss_pred EEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCccc
Confidence 79988988554444432221 23 68899999998 444677788887765321 01122210
Q ss_pred -CCCCeeEEEEeC---CCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 112 -DQTQFNNLCHIP---ESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 112 -h~~~In~l~~~p---dsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
.+.+|..+-|+| ++..|++-.+|++|++|++..--..|.
T Consensus 122 ~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~ 164 (452)
T 3pbp_A 122 GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI 164 (452)
T ss_dssp -CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE
T ss_pred CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc
Confidence 147899999999 457899999999999999986444553
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=85.55 E-value=22 Score=32.69 Aligned_cols=114 Identities=9% Similarity=0.111 Sum_probs=62.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCC-----CCCCeeEEEEcC
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHM-----YGLPIRDIKFHD 83 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~-----~~~pI~sI~F~~ 83 (248)
|-.+..+..+ -...+.++|.|++. ++++...+ |.|++++...++. +...... .......|+|+|
T Consensus 16 gf~~~~~a~~-l~~P~~~a~~pdG~-l~V~e~~g-------g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 16 NFDKKVILSN-LNKPHALLWGPDNQ-IWLTERAT-------GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp TSCEEEEECC-CSSEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CeEEEEEECC-CCCceEEEEcCCCc-EEEEEcCC-------CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC
Confidence 3344555543 45678999999765 54544443 2688887665543 2222111 124567999999
Q ss_pred C----c---eeeeC------------CCeEEEEECCC--CC-----E-EEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 84 N----Y---VLSMD------------SSVVKIWSKDN--GS-----L-FTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 84 d----~---l~Ssd------------d~~IKIWD~~t--Gk-----~-~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ + ++.+. ...|--|+... ++ . +..+........+.++|.|||.+.++.++
T Consensus 87 df~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 87 DFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 5 3 33322 12333344332 11 1 11222211245789999999998887665
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=83.64 E-value=24 Score=31.63 Aligned_cols=108 Identities=9% Similarity=0.046 Sum_probs=70.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecC----CCC-CCeeEEEE---cCCc--eeeeC-
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDH----MYG-LPIRDIKF---HDNY--VLSMD- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h----~~~-~pI~sI~F---~~d~--l~Ssd- 90 (248)
..--++.|.+.+|.+..++--. |+|..||...+.-..+ .+. +.+ ..+..|.| .+++ ++.++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~-------g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYK-------GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTT-------TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccC-------CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3445677877778777766543 5999999975533222 222 111 13578999 5776 33244
Q ss_pred -------------CCeEEEEECC---CCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 91 -------------SSVVKIWSKD---NGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 91 -------------d~~IKIWD~~---tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
++.|..+|.. +|+.+..+.-. -....|++++.++|+.-++++-. +.|
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 5778899999 88887665420 01358999999999988888776 553
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=83.31 E-value=18 Score=37.73 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=62.5
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCE--EEEeecCCCCCeeEEEEeCC-----
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSL--FTCIESGDQTQFNNLCHIPE----- 124 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~--~~tie~~h~~~In~l~~~pd----- 124 (248)
.|++.|...++.+.......+..|...+.+... ++++ .+.+-+++.++|+. +...+- +.+|.|+++.|-
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l--~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEM--EHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEEC--SSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCC--CCceEEEEeecCCCCcc
Confidence 478888766555544433334678888877766 4443 56666777776642 334444 578999998763
Q ss_pred -CCEEEEEeC-CCeEEEEEcCCCC
Q psy2083 125 -SGMMFIANE-NKKILTYYIPSLG 146 (248)
Q Consensus 125 -sgll~sa~e-d~~I~~w~Ip~lG 146 (248)
+..+++|.. |++|+++.+|.|.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCC
T ss_pred cccEEEEEECCCCEEEEEECCCCC
Confidence 479999996 9999999998753
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=82.89 E-value=7.7 Score=39.44 Aligned_cols=39 Identities=3% Similarity=0.168 Sum_probs=32.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD 69 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~ 69 (248)
..+++++..++...+++.+-|. ++|+|++.+++.+.+.+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~--------~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDY--------KLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTC--------EEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCC--------EEEEEECCCCCeEeeec
Confidence 3567788888888888999886 89999999999888765
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=82.63 E-value=3.7 Score=39.29 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=42.8
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-CC-----CeEEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DS-----SVVKI 96 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd-----~~IKI 96 (248)
.++++..++.+++.+|.++ +.+.+||..+.+......-.....-.++...+++ ++++ .+ ..+.+
T Consensus 246 ~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp CEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred ccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 3456666555555555443 3899999998754333211111111345566554 5555 33 57999
Q ss_pred EECCCCCEEEEe
Q psy2083 97 WSKDNGSLFTCI 108 (248)
Q Consensus 97 WD~~tGk~~~ti 108 (248)
||..+++ ...+
T Consensus 319 yd~~t~~-W~~~ 329 (656)
T 1k3i_A 319 YSPSSKT-WTSL 329 (656)
T ss_dssp EETTTTE-EEEE
T ss_pred eCCCCCc-ceeC
Confidence 9998765 4444
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=81.80 E-value=28 Score=33.66 Aligned_cols=107 Identities=9% Similarity=0.025 Sum_probs=61.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
..|.+++..+ .|.+..+...+ -+..||.++++...... ......|.+|...+++ .+++. +-|-.+|.
T Consensus 407 ~~v~~i~~d~-~g~lWigt~~~--------Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~ 476 (781)
T 3v9f_A 407 NSVLCSLKDS-EGNLWFGTYLG--------NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDL 476 (781)
T ss_dssp SBEEEEEECT-TSCEEEEETTE--------EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEES
T ss_pred cceEEEEECC-CCCEEEEeccC--------CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeC
Confidence 3455555444 34455554433 58889988765322211 1123578999988877 34445 56778999
Q ss_pred CCCCEEEEeecC----CCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 100 DNGSLFTCIESG----DQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 100 ~tGk~~~tie~~----h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
.+++...-.... ....|++++..++|.+.+ |+.++-+..|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~ 520 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIY 520 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEE
Confidence 887654332220 025788998888777554 5543224334
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=81.57 E-value=29 Score=31.03 Aligned_cols=112 Identities=12% Similarity=0.129 Sum_probs=62.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEec---CCCCCCeeEEEEcCC---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKD---HMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~---h~~~~pI~sI~F~~d--- 84 (248)
.+..+..+ -..-..++|.|++. ++.+.... |.|++++...++. +.... ..-......|+|+|+
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~-llVter~~-------G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~ 93 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGD-LLVSSRDE-------ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYAS 93 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHH
T ss_pred eeEEeecC-CCCceEEEEcCCCc-EEEEEecC-------CEEEEEECCCCcEeeecccCceeecCCCCceeeEecccccc
Confidence 44445554 46678999999765 55554422 4899988766543 22211 111245789999996
Q ss_pred -c-e-ee---eCCCeEEEEECCCC----------C-EEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 85 -Y-V-LS---MDSSVVKIWSKDNG----------S-LFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 85 -~-l-~S---sdd~~IKIWD~~tG----------k-~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ | ++ ..+..|--|....+ + .+..+.......-+.++|.|||.+.++.++
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 2 2 22 12333333444431 1 122232211234567999999988887654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=81.27 E-value=19 Score=35.10 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=52.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----------ceeEEecCCCCCCeeEEEE
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----------KPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----------~pl~~~~h~~~~pI~sI~F 81 (248)
...++.-. .....+...||+.+++++|--+ .+|.++|++.- +-.....-.-|+.-.-.+|
T Consensus 315 ~~~~iP~p--ksPHGv~vsPDGkyi~v~GKLs-------ptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~F 385 (638)
T 3sbq_A 315 FTRYVPVP--KNPHGCNTSSDGKYFIAAGKLS-------PTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTF 385 (638)
T ss_dssp SEEEEEES--SSCCCEEECTTSCEEEEECTTS-------SBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEE
T ss_pred eEEEEeCC--CCCcceeeCCCCCEEEEcCCCC-------CeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEE
Confidence 44455543 3445788899888877776654 59999999841 1112222223466678899
Q ss_pred cCCc-eeee--CCCeEEEEECCC
Q psy2083 82 HDNY-VLSM--DSSVVKIWSKDN 101 (248)
Q Consensus 82 ~~d~-l~Ss--dd~~IKIWD~~t 101 (248)
.+++ +.++ -|.+|--|++.+
T Consensus 386 d~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 386 DGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCceEeeeeecceEEEEeccH
Confidence 9998 4443 577788899875
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=80.46 E-value=42 Score=32.21 Aligned_cols=109 Identities=10% Similarity=-0.010 Sum_probs=71.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD 98 (248)
..+..+.|.+.++.++.+.... +.|..+++..+....+...+- .....|++.+.. |.-+ ..+.|.+-|
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~-------~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISL-------KTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEEECCCCEEEEEECCC-------CeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEECCCCEEEEEe
Confidence 4677899999888888775554 489999987654433332221 235688887653 4444 467888888
Q ss_pred CCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeC--CCeEEEEE
Q psy2083 99 KDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANE--NKKILTYY 141 (248)
Q Consensus 99 ~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~e--d~~I~~w~ 141 (248)
.+ |+....+- . .-...+++++.|..|.|+.+.. .++|...+
T Consensus 109 ~d-G~~~~~l~~~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 109 LD-GQHRQVLVWK-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp TT-STTCEEEECS-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred cC-CCcEEEEEeC-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 87 44333333 3 1467789999998878877763 35555544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 248 | |||
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.84 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.79 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.76 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.75 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.72 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.72 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.71 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.7 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.69 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.68 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.67 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.66 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.65 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.65 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.65 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.64 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.63 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.63 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.63 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.61 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.58 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.57 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.55 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.5 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.49 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.46 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.44 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.41 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.33 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.33 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.29 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.28 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.18 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.17 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.16 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.14 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.12 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.11 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.09 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.83 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.82 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.82 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.73 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.59 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.55 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.53 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.43 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.05 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.98 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.54 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.54 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.5 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.47 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.44 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.28 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.96 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.64 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.62 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.31 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.31 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 96.12 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.11 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 95.93 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 95.63 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.42 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 94.95 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 94.62 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 94.07 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 92.31 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.69 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.0 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 90.82 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 90.74 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 87.44 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 87.07 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 86.92 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 86.0 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 85.93 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 84.77 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 82.88 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 82.49 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 82.02 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 81.45 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.84 E-value=7.1e-20 Score=154.90 Aligned_cols=126 Identities=12% Similarity=0.206 Sum_probs=109.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
.|..+++++.++.+| .+.|++++|+|++.++++++.|+ +|++||++...++... ...+..+|++++|+|+
T Consensus 211 ~d~~~~~~~~~~~~h-~~~i~~v~~~p~~~~l~s~s~d~--------~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 281 (340)
T d1tbga_ 211 WDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGSDDA--------TCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCTTCCSCEEEEEECSS
T ss_pred EECCCCcEEEEEeCC-CCCeEEEEECCCCCEEEEEeCCC--------eEEEEeecccccccccccccccCceEEEEECCC
Confidence 366788899998876 78999999999887777777764 9999999999887664 3444578999999999
Q ss_pred c--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ | +++.|+.|+|||..+++++.++.+ |..+|++++|+||+.+|++|+.|++|++|+
T Consensus 282 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 282 GRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 7 4 456899999999999999999998 699999999999999999999999999995
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=4.2e-18 Score=140.98 Aligned_cols=92 Identities=11% Similarity=0.174 Sum_probs=81.2
Q ss_pred eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC
Q psy2083 48 TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd 124 (248)
++.||+|++||+++++++.... +|..+|++++|+|++ ++ ++.|+.|+|||.++++++.++.+ |..+|++++|+|+
T Consensus 223 ~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~V~~~~~s~~ 300 (317)
T d1vyhc1 223 GSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKT 300 (317)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSS
T ss_pred ccCCCEEEEEECCCCcEEEEEe-CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEcCC
Confidence 4566899999999998887653 344899999999997 44 46899999999999999999998 6999999999999
Q ss_pred CCEEEEEeCCCeEEEEE
Q psy2083 125 SGMMFIANENKKILTYY 141 (248)
Q Consensus 125 sgll~sa~ed~~I~~w~ 141 (248)
+.+|++|+.|++|++|+
T Consensus 301 ~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 301 APYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEeCCCeEEEeC
Confidence 99999999999999995
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.3e-17 Score=144.94 Aligned_cols=123 Identities=11% Similarity=0.120 Sum_probs=105.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+.+..+.. .+.|.+++|.|++..+++++.++ .|++||++++.......|. .+|++|+|+|++
T Consensus 210 ~d~~~~~~~~~~~~--~~~i~~l~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~--~~i~~v~~s~~g 277 (337)
T d1gxra_ 210 WDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESS--------NVEVLHVNKPDKYQLHLHE--SCVLSLKFAYCG 277 (337)
T ss_dssp EETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTSSCEEEECCCS--SCEEEEEECTTS
T ss_pred cccccceeeccccc--ccceEEEEEcccccccceecccc--------ccccccccccccccccccc--cccceEEECCCC
Confidence 46778888888775 47899999999877777777764 8999999998876665554 899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+ +++.|++|+|||..+|+.+..+.. ..+|++++|+||+.+|++|+.|++|++|+|
T Consensus 278 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 278 KWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEccC--CCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 4 456899999999999999988775 789999999999999999999999999986
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.75 E-value=1.1e-17 Score=148.97 Aligned_cols=114 Identities=12% Similarity=0.148 Sum_probs=93.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-----CCCCCCeeEEEEcCCc--eee-eCCC-
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-----HMYGLPIRDIKFHDNY--VLS-MDSS- 92 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-----h~~~~pI~sI~F~~d~--l~S-sdd~- 92 (248)
...+++++|+|+ |.+++++.|+ +|+|||+++++++.... .+|..+|++|+|+|++ |++ ++|+
T Consensus 184 ~~~~~~v~~s~d-g~lasgs~Dg--------~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t 254 (393)
T d1sq9a_ 184 SQFATSVDISER-GLIATGFNNG--------TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 254 (393)
T ss_dssp CCCCCEEEECTT-SEEEEECTTS--------EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT
T ss_pred CCcEEEEEECCC-CEEEEEeCCC--------cEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCC
Confidence 356788888885 5666666664 99999999998876432 2456899999999997 444 5665
Q ss_pred --eEEEEECCCCCEEEEeec------------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 --VVKIWSKDNGSLFTCIES------------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 --~IKIWD~~tGk~~~tie~------------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|+|||.++|+.+.++.. +|...|++++|+|||.+|++|+.|++|++|++..
T Consensus 255 ~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC
Confidence 599999999999998852 2688999999999999999999999999999865
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.72 E-value=6.9e-17 Score=140.68 Aligned_cols=129 Identities=10% Similarity=0.133 Sum_probs=104.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
+..+++...++.+| .+.|.+++|+|++..++++|+++ |+|++||++++++..... .|..+|+++.|+|++
T Consensus 132 ~~~~~~~~~~l~~h-~~~v~~v~~~~~~~~~l~sgs~d-------~~i~i~d~~~~~~~~~~~-~~~~~i~~v~~~p~~~ 202 (311)
T d1nr0a1 132 LFDTGTSNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDD-------NTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGS 202 (311)
T ss_dssp ETTTCCBCBCCCCC-SSCEEEEEECSSSSCEEEEEETT-------SCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSS
T ss_pred cccccccccccccc-ccccccccccccceeeecccccc-------cccccccccccccccccc-cccccccccccCcccc
Confidence 34556666676665 68899999999888755544443 499999999988776642 334899999999997
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEeec------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCIES------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~tie~------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|++||..+++.+..++. +|..+|++++|+|+|.+|++|+.|++|++|++..
T Consensus 203 ~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t 269 (311)
T d1nr0a1 203 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 269 (311)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 44 46899999999999998888764 2578899999999999999999999999999754
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=7.8e-17 Score=139.95 Aligned_cols=130 Identities=11% Similarity=0.175 Sum_probs=99.0
Q ss_pred cchhcCceeEEEe------cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE-----------Ee
Q psy2083 6 LRQDKGSLFTCIE------SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR-----------VK 68 (248)
Q Consensus 6 ~~~~~G~~~~~~~------~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-----------~~ 68 (248)
.+..++..+..+. .+|.+.|.+++|+|++..+++++.|+ +|++||++++.... ..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (388)
T d1erja_ 232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR--------SVKLWNLQNANNKSDSKTPNSGTCEVT 303 (388)
T ss_dssp EETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEEC---------------CEEEE
T ss_pred eecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCC--------cEEEEeccCCccccccccccccceeee
Confidence 3455666665543 23467899999999887777777774 99999999764321 11
Q ss_pred cCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE------eCCCCEEEEEeCCCeEEE
Q psy2083 69 DHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH------IPESGMMFIANENKKILT 139 (248)
Q Consensus 69 ~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~------~pdsgll~sa~ed~~I~~ 139 (248)
...|..+|.+++|+|++ |+ ++.|+.|+|||.++|+++.++.+ |..+|.++++ +||+.+|++|+.|++|++
T Consensus 304 ~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~-H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~i 382 (388)
T d1erja_ 304 YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382 (388)
T ss_dssp EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEE
T ss_pred cccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeC-CCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEE
Confidence 22345899999999997 44 46899999999999999999998 6999999875 679999999999999999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|++..
T Consensus 383 W~~~k 387 (388)
T d1erja_ 383 WKYKK 387 (388)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 99754
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.71 E-value=3.6e-16 Score=131.68 Aligned_cols=124 Identities=8% Similarity=0.166 Sum_probs=102.9
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----- 85 (248)
.+..+++.+| .+.|++++|+|++.++++||.|+ +|+|||+++++++.... .|..+|++|+|+|++
T Consensus 45 ~~~~~tL~GH-~~~I~~l~~s~~~~~l~sgs~Dg--------~v~iWd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~~ 114 (340)
T d1tbga_ 45 MRTRRTLRGH-LAKIYAMHWGTDSRLLVSASQDG--------KLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVAC 114 (340)
T ss_dssp CCEEEEECCC-SSCEEEEEECTTSSEEEEEETTT--------EEEEEETTTTEEEEEEE-CSCSCEEEEEECTTSSEEEE
T ss_pred eeeeEEECCC-CCCEEEEEECCCCCEEEEEECCC--------ceeeeecccceeEEEEe-cccccEEeeEeeccceeeee
Confidence 4566778876 79999999999888888887775 99999999998877653 234889999998742
Q ss_pred --------------------------------------------------------------------------------
Q psy2083 86 -------------------------------------------------------------------------------- 85 (248)
Q Consensus 86 -------------------------------------------------------------------------------- 85 (248)
T Consensus 115 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (340)
T d1tbga_ 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp EETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred ecccceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccc
Confidence
Q ss_pred -----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 -----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 -----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++++.|+.|++||.++++++.++.+ |..+|++++|+|++.+|++|+.|+.|++|++...
T Consensus 195 ~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~ 258 (340)
T d1tbga_ 195 DTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ccceeEEeecCceEEEEECCCCcEEEEEeC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc
Confidence 1123467888899988998888888 6899999999999999999999999999998653
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.70 E-value=2e-16 Score=132.96 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=94.7
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---------
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--------- 85 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--------- 85 (248)
..+...+.+.|.+++|+|++.++++++.++ .|++||++++.........|..+|++++|+|..
T Consensus 155 ~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg--------~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 226 (287)
T d1pgua2 155 FDLKTPLRAKPSYISISPSETYIAAGDVMG--------KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIE 226 (287)
T ss_dssp EECSSCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCS
T ss_pred eeeeeccCCceeEEEeccCccccccccccc--------cccceeecccccccccccccccccceeeecccccccccccCC
Confidence 333444567899999999887777777664 899999999877665444556899999999742
Q ss_pred ---ee-eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 ---VL-SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 ---l~-Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++ ++.|++|+|||.++ ++.+..+.+ |...|++++|+|++ .|++++.|+.|++|+|
T Consensus 227 ~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~-h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 227 EDLVATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp CCEEEEEETTSCEEEEESSCTTCCEEETTS-STTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred CCeeEeecCCCeEEEEECCCCCeEEEEeCC-CCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 44 46899999999877 566777777 79999999999986 6889999999999986
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.69 E-value=2.6e-16 Score=136.93 Aligned_cols=129 Identities=9% Similarity=0.121 Sum_probs=104.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~ 85 (248)
+..++.....+.+| .+.|++++|+|++.++++++.|+ +|+|||++++..... .-..|..+|++|+|+|++
T Consensus 44 ~~~~~~~~~~~~~H-~~~v~~~~~sp~g~~latg~~dg--------~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~ 114 (311)
T d1nr0a1 44 PVGSLTDTEIYTEH-SHQTTVAKTSPSGYYCASGDVHG--------NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114 (311)
T ss_dssp ETTCSSCCEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS
T ss_pred ECCCCceeEEEcCC-CCCEEEEEEeCCCCeEeccccCc--------eEeeeeeeccccccccccccccCccccccccccc
Confidence 45567777777665 78999999999877777777774 999999999865432 223445899999999997
Q ss_pred --eee-eC--CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCE-EEEEeCCCeEEEEEcCCC
Q psy2083 86 --VLS-MD--SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 --l~S-sd--d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgl-l~sa~ed~~I~~w~Ip~l 145 (248)
+++ ++ ++.++|||.++++...++.+ |...|++++|+|++.+ |++|+.|++|++|+++..
T Consensus 115 ~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~ 179 (311)
T d1nr0a1 115 KRIAAVGEGRERFGHVFLFDTGTSNGNLTG-QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF 179 (311)
T ss_dssp CEEEEEECCSSCSEEEEETTTCCBCBCCCC-CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccceeeeccccccccccccccccc
Confidence 443 33 56799999999999999988 6899999999999985 778999999999998764
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.2e-15 Score=132.30 Aligned_cols=126 Identities=10% Similarity=0.123 Sum_probs=106.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.+..++++......+ ...|.+++|++++..+++++.++ +|++||+++++++....|. .+|++++|+|++
T Consensus 168 ~~~~~~~~~~~~~~~-~~~v~~l~~s~~~~~~~~~~~d~--------~v~i~d~~~~~~~~~~~~~--~~i~~l~~~~~~ 236 (337)
T d1gxra_ 168 WDLHNQTLVRQFQGH-TDGASCIDISNDGTKLWTGGLDN--------TVRSWDLREGRQLQQHDFT--SQIFSLGYCPTG 236 (337)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEECTTS
T ss_pred ccccccccccccccc-ccccccccccccccccccccccc--------cccccccccceeecccccc--cceEEEEEcccc
Confidence 455667777776665 68899999999877777777664 8999999999998887765 899999999987
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.... .. |...|++++|+|++.+|++|+.|+.|++|+++.
T Consensus 237 ~~l~~~~~d~~i~i~d~~~~~~~~~-~~-~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~ 296 (337)
T d1gxra_ 237 EWLAVGMESSNVEVLHVNKPDKYQL-HL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCEEEE-CC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cccceeccccccccccccccccccc-cc-cccccceEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 4456899999999999887654 44 589999999999999999999999999999875
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.67 E-value=1e-15 Score=132.98 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=104.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~ 82 (248)
++..+|+++..+.+| ...|++++|.|++..++ +++.|+ .|++||++..+..... .+.+..+|.+|+|+
T Consensus 144 ~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~d~--------~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 214 (325)
T d1pgua1 144 ISWDSGNSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDG--------SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 214 (325)
T ss_dssp EETTTCCEEEECCSC-SSCEEEEEECSSSSCEEEEEETTT--------EEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred Eeecccccceeeeec-ccccccccccccccceEEEeeccc--------ccccccccccccceecccccCCCCccEEeeec
Confidence 345678888888876 78999999999887755 455554 9999999987654432 34556889999999
Q ss_pred CCc---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEe---CCCCEEEEEeCCCeEEEEEcCC
Q psy2083 83 DNY---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHI---PESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 83 ~d~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~---pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+. ++ ++.|+.|+|||.++++.+.++++ |..++.++.|+ |||.+|++++.|+.|++|++..
T Consensus 215 pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~-~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~ 282 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISCFDGKSGEFLKYIED-DQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT 282 (325)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCB-TTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTT
T ss_pred cccceeccccccccceeeeeeccccccccccc-cccccccceeeeeccCCCEEEEEeCCCeEEEEECCC
Confidence 974 44 46899999999999999999998 57787776665 8999999999999999999875
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.66 E-value=2.6e-15 Score=123.78 Aligned_cols=123 Identities=11% Similarity=0.180 Sum_probs=100.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-------
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN------- 84 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d------- 84 (248)
....++.+| .+.|++++|+|++.++++++.|+ +|+|||+.+++++.+.. .|..+|++++|+++
T Consensus 8 ~~~~~L~GH-~~~I~~l~~sp~~~~l~s~s~Dg--------~i~iWd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~~~~ 77 (317)
T d1vyhc1 8 PEKYALSGH-RSPVTRVIFHPVFSVMVSASEDA--------TIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASC 77 (317)
T ss_dssp SCSCEEECC-SSCEEEEEECSSSSEEEEEESSS--------CEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEE
T ss_pred CccEEEcCC-CCCeEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCCEEEEEe-CCCCcEEEEeeeccccccccc
Confidence 344567776 79999999999888788877774 99999999998877652 23367777777653
Q ss_pred -----------------------------------c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 85 -----------------------------------Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 85 -----------------------------------~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
+ ++++.|+.+++||.++++.+.++.+ |...+++++++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 156 (317)
T d1vyhc1 78 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGT 156 (317)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSS
T ss_pred ccccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEcc-CCCcceeeecccCCC
Confidence 2 3345789999999999999999998 689999999999999
Q ss_pred EEEEEeCCCeEEEEEcCCC
Q psy2083 127 MMFIANENKKILTYYIPSL 145 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip~l 145 (248)
+|++++.|+.|.+|++...
T Consensus 157 ~l~~~~~d~~v~~~~~~~~ 175 (317)
T d1vyhc1 157 LIASCSNDQTVRVWVVATK 175 (317)
T ss_dssp EEEEEETTSCEEEEETTTC
T ss_pred EEEEEeCCCeEEEEeeccc
Confidence 9999999999999998753
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.65 E-value=8.3e-16 Score=129.54 Aligned_cols=128 Identities=9% Similarity=0.146 Sum_probs=93.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d 84 (248)
|..++++.......|.+.|++++|+|++..+++++.++ .|++||++++.++... ...|..+|++++|+|+
T Consensus 164 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 235 (299)
T d1nr0a2 164 KLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSR--------KVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235 (299)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------CEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT
T ss_pred cccccccccccccccccccccccccccccccccccccc--------cccccccccccccccccccccccccccccccccc
Confidence 33445544433333468899999999887777777764 8999999988665332 2334589999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEe--ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCI--ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~ti--e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ ++ ++.|+.|+|||.++++....+ ..++...|++++ +|++++|++|+.|++|++|+||
T Consensus 236 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI-WLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp SSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred ccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE-ECCCCEEEEEeCCCEEEEEecc
Confidence 7 44 468999999999987643333 233345676665 5677899999999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.65 E-value=8.9e-16 Score=136.35 Aligned_cols=120 Identities=10% Similarity=0.126 Sum_probs=92.6
Q ss_pred cchhcCceeEEEec-----CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-----------
Q psy2083 6 LRQDKGSLFTCIES-----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----------- 69 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-----~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----------- 69 (248)
.|..+|+++..++. +|.+.|++++|+|++.+|++++.|+ ..+.|+|||+++++++....
T Consensus 210 wd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~-----t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~ 284 (393)
T d1sq9a_ 210 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-----SFGCITLYETEFGERIGSLSVPTHSSQASLG 284 (393)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET-----TEEEEEEEETTTCCEEEEECBC--------C
T ss_pred EeecccccccccccccccccccceEEEcccccccceeeeecCCC-----Ccceeeecccccceeeeeeccccccccceee
Confidence 35667777766542 3478999999999888888887775 22469999999987766542
Q ss_pred -CCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCee----EEEEeCCCCEEEEE
Q psy2083 70 -HMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFN----NLCHIPESGMMFIA 131 (248)
Q Consensus 70 -h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In----~l~~~pdsgll~sa 131 (248)
.+|..+|++|+|+|++ |+ ++.|++|||||.++|+++.++.+ |..+|+ .++|.|++..++++
T Consensus 285 ~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~g-H~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 285 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM-HCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred eecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECC-cCCcccCCccEEEECCCCCEEEEc
Confidence 2455899999999997 55 46899999999999999999998 677775 47788887765433
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.65 E-value=3.2e-15 Score=125.87 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=97.9
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
|.+.+++.+| .+.|++++|+|++.++++++.|+ +|++||+++++++......|..+|++++|+|++ +++
T Consensus 2 g~~~~~~~GH-~~~V~~l~~s~dg~~l~s~s~Dg--------~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~ 72 (299)
T d1nr0a2 2 GSIDQVRYGH-NKAITALSSSADGKTLFSADAEG--------HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 72 (299)
T ss_dssp TEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE
T ss_pred CccceEcCCC-CCCcEEEEECCCCCEEEEEcCCC--------eEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecc
Confidence 6777888886 79999999999888888877774 999999999998887655666899999999998 556
Q ss_pred eCCCeEEEEECCCCCE-------------EEE--eec------------------------CCCCCeeEEEEeCCCCEEE
Q psy2083 89 MDSSVVKIWSKDNGSL-------------FTC--IES------------------------GDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~-------------~~t--ie~------------------------~h~~~In~l~~~pdsgll~ 129 (248)
+.|+.|++|+...... ... +.+ .....+++++|+||+.+|+
T Consensus 73 ~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 152 (299)
T d1nr0a2 73 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVA 152 (299)
T ss_dssp ETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEE
T ss_pred cceeeEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7899999999653210 000 000 0134678889999999999
Q ss_pred EEeCCCeEEEEEcCC
Q psy2083 130 IANENKKILTYYIPS 144 (248)
Q Consensus 130 sa~ed~~I~~w~Ip~ 144 (248)
+|+.|+.|.+|++..
T Consensus 153 ~g~~dg~i~~~d~~~ 167 (299)
T d1nr0a2 153 VGGQDSKVHVYKLSG 167 (299)
T ss_dssp EEETTSEEEEEEEET
T ss_pred ccccccccccccccc
Confidence 999999999999753
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=6.3e-15 Score=123.09 Aligned_cols=127 Identities=14% Similarity=0.260 Sum_probs=99.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~ 83 (248)
.|...++++..+.+| ...|..+.+.+ .++++++.|+ +|++||++..++.... .+.+...+.++.|++
T Consensus 202 ~d~~~~~~~~~~~~~-~~~v~~~~~~~--~~l~s~s~d~--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (342)
T d2ovrb2 202 WDVETGNCIHTLTGH-QSLTSGMELKD--NILVSGNADS--------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 270 (342)
T ss_dssp EETTTCCEEEEECCC-CSCEEEEEEET--TEEEEEETTS--------CEEEEETTTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred eecccceeeeEeccc-ccceeEEecCC--CEEEEEcCCC--------EEEEEecccccccccccccceeeeceeecccCC
Confidence 466778888888776 56666655543 4677777664 9999999998776553 334557899999998
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCC----eEEEEEcC
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIES----GDQTQFNNLCHIPESGMMFIANENK----KILTYYIP 143 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~----~I~~w~Ip 143 (248)
+. +++++|++|+|||.++|+.+.++.. +|...|++++|+|++.+|++|++|| +|++|+..
T Consensus 271 ~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 271 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence 88 5567899999999999999988752 2467899999999999999999887 48999864
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.63 E-value=1.8e-15 Score=133.29 Aligned_cols=113 Identities=8% Similarity=0.121 Sum_probs=91.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD 98 (248)
.+|++++|+|++..+++++.++ .|+|||+.++++.... -.+|..+|++|+|+|++ |+ ++.|++|+|||
T Consensus 8 ~pIt~~~~s~dg~~la~~~~~~--------~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQIAICPNNH--------EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp SCCCEEEECTTSSEEEEECSSS--------EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCC--------EEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEe
Confidence 5799999999887777776664 8999999988754432 23455999999999997 55 46899999999
Q ss_pred CCCCCEEEEe--ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 99 KDNGSLFTCI--ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 99 ~~tGk~~~ti--e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+++.....+ .. |..+|++++|+|++..|++++.|++|.+|++..
T Consensus 80 ~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~ 126 (371)
T d1k8kc_ 80 LKGRTWKPTLVILR-INRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 126 (371)
T ss_dssp EETTEEEEEEECCC-CSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred eccccccccccccc-ccccccccccccccccceeecccCcceeeeeec
Confidence 9987654443 44 578999999999999999999999999998654
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.63 E-value=4e-15 Score=131.06 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=96.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++..+.+| .+.|++++|+|++.+++++|.|+ +|+|||++++..... ...++..+|++++|+|++ +++
T Consensus 43 ~~~~l~gH-~~~V~~l~fsp~~~~l~s~s~D~--------~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 113 (371)
T d1k8kc_ 43 QVHELKEH-NGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG 113 (371)
T ss_dssp EEEEEECC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEecCC-CCCEEEEEECCCCCEEEEEECCC--------eEEEEeecccccccccccccccccccccccccccccceee
Confidence 55666665 78999999999888888887774 999999998754332 223455899999999997 455
Q ss_pred eCCCeEEEEECCCCCEEEE----eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTC----IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~t----ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.+++|++|+.+.+..... ..+ |...|.+++|+||+.+|++|+.|++|++|++..
T Consensus 114 s~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~ 172 (371)
T d1k8kc_ 114 SGSRVISICYFEQENDWWVCKHIKKP-IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI 172 (371)
T ss_dssp ETTSSEEEEEEETTTTEEEEEEECTT-CCSCEEEEEECTTSSEEEEEETTSCEEEEECCC
T ss_pred cccCcceeeeeecccccccccccccc-cccccccccccccccceeccccCcEEEEEeecc
Confidence 6899999999887654322 234 578999999999999999999999999998643
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.63 E-value=5.2e-15 Score=128.24 Aligned_cols=114 Identities=11% Similarity=0.221 Sum_probs=95.7
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-----------------CCCCCCeeEEEEcC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-----------------HMYGLPIRDIKFHD 83 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-----------------h~~~~pI~sI~F~~ 83 (248)
|.+.|++++|+|++.+|++| +|+ +|+|||+.+++.+.... +.+...|++|+|+|
T Consensus 61 H~~~V~~l~fs~dg~~lasg-~d~--------~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 131 (388)
T d1erja_ 61 HTSVVCCVKFSNDGEYLATG-CNK--------TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131 (388)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CBS--------CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred CCCcEEEEEECCCCCEEEEE-eCC--------eEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECC
Confidence 46899999999977666554 554 89999999987765431 23457799999999
Q ss_pred Cc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ + +++.|+.|++||..+++.+..+.+ |..+|+++++++++..+++++.++.|++|++..
T Consensus 132 ~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 194 (388)
T d1erja_ 132 DGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 194 (388)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCcceeccccccccccccccccccccccc-ccccccccccccccccccccccceeeeeeeccc
Confidence 97 4 456899999999999999999988 699999999999999999999999999999754
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=9.3e-15 Score=122.67 Aligned_cols=123 Identities=11% Similarity=0.155 Sum_probs=93.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-e-eeeCC
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-V-LSMDS 91 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l-~Ssdd 91 (248)
.+++.+| .+.|.++ +.+++.++++|+.|+ +|+|||+++++++.+.. +|..+|++|+|+|+. + +++.|
T Consensus 5 ~~tL~GH-~~~vitc-~~~~~~~l~tgs~Dg--------~i~vWd~~~~~~~~~l~-~H~~~V~~l~~s~~~~l~s~s~D 73 (355)
T d1nexb2 5 RTTLRGH-MTSVITC-LQFEDNYVITGADDK--------MIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGSTD 73 (355)
T ss_dssp EEEEECC-SSSCEEE-EEEETTEEEEEETTT--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEETTTEEEEEETT
T ss_pred cEEECCc-CCCcEEE-EEECCCEEEEEeCCC--------eEEEEECCCCcEEEEEE-CCCCCEEEEEEcCCCEEEEEecc
Confidence 3567776 5777664 444566777777764 99999999999988753 344899999999987 4 45689
Q ss_pred CeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++|++||..+++........ +........+.|++..+++++.|+.|++|+++....
T Consensus 74 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~ 130 (355)
T d1nexb2 74 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS 130 (355)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC---
T ss_pred cccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCce
Confidence 99999999998887766642 123445677789999999999999999999876543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=9.4e-15 Score=121.36 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=93.5
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc---ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~---l~ 87 (248)
+++ +..+|++.|++++|+|++.+|++++.|+ +|+|||++++.+... ...+|..+|++|+|+|+. ++
T Consensus 3 ~v~-~~~~h~d~I~~l~fsp~~~~L~s~s~Dg--------~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~ 73 (342)
T d1yfqa_ 3 IVQ-IEQAPKDYISDIKIIPSKSLLLITSWDG--------SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73 (342)
T ss_dssp EEE-CSSCCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEE
T ss_pred eEE-cCCCCCCCEEEEEEeCCCCEEEEEECCC--------eEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEE
Confidence 344 3455589999999999988888887775 999999987643221 122345899999999864 44
Q ss_pred e-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 88 S-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 88 S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ +.|++|++||..++........++........+.+++..+++++.++++.+|++.
T Consensus 74 sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~ 130 (342)
T d1yfqa_ 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp EEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHH
T ss_pred Ecccccceeeeecccccccccccccccccccccccccccccccccccccccceeecc
Confidence 4 5899999999999888877776333444566677889999999999999999863
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=1.3e-14 Score=121.83 Aligned_cols=119 Identities=13% Similarity=0.122 Sum_probs=90.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEE-EEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDI-KFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI-~F~~d 84 (248)
.+..+|.++..+.+| .+.|..+.+.+ ..+++++.|+ +|++||++++.......+ .++.++ .|+++
T Consensus 228 ~d~~~~~~~~~~~~h-~~~v~~~~~~~--~~l~~~~~dg--------~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~ 293 (355)
T d1nexb2 228 WDLENGELMYTLQGH-TALVGLLRLSD--KFLVSAAADG--------SIRGWDANDYSRKFSYHH---TNLSAITTFYVS 293 (355)
T ss_dssp EETTTCCEEEEECCC-SSCCCEEEECS--SEEEEECTTS--------EEEEEETTTCCEEEEEEC---TTCCCCCEEEEC
T ss_pred eeccccccccccccc-ccccccccccc--ceeeeeeccc--------ccccccccccceeccccc---CCceEEEEEcCC
Confidence 456678888888876 68888877654 4566776664 999999999876554433 445555 45666
Q ss_pred c--eeeeCCCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 85 Y--VLSMDSSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 85 ~--l~Ssdd~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
+ ++++.|++|+|||.++|+++.. +.+ |..+|++++|+|+ .++++++.|+++.+|
T Consensus 294 ~~~l~~g~d~~i~vwd~~tg~~~~~~~~~-~~~~V~~v~~~~~-~~~~~~s~dg~~~l~ 350 (355)
T d1nexb2 294 DNILVSGSENQFNIYNLRSGKLVHANILK-DADQIWSVNFKGK-TLVAAVEKDGQSFLE 350 (355)
T ss_dssp SSEEEEEETTEEEEEETTTCCBCCSCTTT-TCSEEEEEEEETT-EEEEEEESSSCEEEE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEecC-CCCCEEEEEEcCC-eEEEEEECCCcEEEE
Confidence 5 6677889999999999998865 445 6899999999987 588889999986665
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.55 E-value=4.4e-14 Score=122.49 Aligned_cols=126 Identities=9% Similarity=0.103 Sum_probs=89.7
Q ss_pred hhcCceeEEEec--CCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc--
Q psy2083 8 QDKGSLFTCIES--GDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-- 82 (248)
Q Consensus 8 ~~~G~~~~~~~~--~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-- 82 (248)
..+++....+.. .|...|.+++|+|+++.++ +++.| |.|++||+++++++.+.. +|..+|.++.|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d--------~~i~iwd~~~~~~~~~l~-~~~~~v~~~~~s~~ 259 (325)
T d1pgua1 189 GPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD--------RKISCFDGKSGEFLKYIE-DDQEPVQGGIFALS 259 (325)
T ss_dssp TTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT--------CCEEEEETTTCCEEEECC-BTTBCCCSCEEEEE
T ss_pred ccccccceecccccCCCCccEEeeeccccceeccccccc--------cceeeeeecccccccccc-ccccccccceeeee
Confidence 344555555432 3357799999999876655 55555 389999999999887753 233667666655
Q ss_pred -CCc---eeeeCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEc
Q psy2083 83 -DNY---VLSMDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIP-ESGMMFIANENKKILTYYI 142 (248)
Q Consensus 83 -~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~p-dsgll~sa~ed~~I~~w~I 142 (248)
+++ ++++.|++|+|||.++|+++.++..+ +...+..+++.+ +++.|++++.|++|++|+|
T Consensus 260 ~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 444 44568999999999999999988762 123445565554 3468999999999999986
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=7.1e-13 Score=110.32 Aligned_cols=125 Identities=10% Similarity=0.203 Sum_probs=93.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|...+..+..+.++ ...+ .+..+++..+++++.|+ +|++||++.++++.... .|...|.++.|+++.
T Consensus 162 ~d~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~s~~~dg--------~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~ 229 (342)
T d2ovrb2 162 WDPETETCLHTLQGH-TNRV--YSLQFDGIHVVSGSLDT--------SIRVWDVETGNCIHTLT-GHQSLTSGMELKDNI 229 (342)
T ss_dssp EEGGGTEEEEEECCC-SSCE--EEEEECSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCCSCEEEEEEETTE
T ss_pred eecccceeeEEEcCc-cccc--ccccCCCCEEEEEeCCC--------eEEEeecccceeeeEec-ccccceeEEecCCCE
Confidence 345566777777765 3333 33344455676776664 99999999999887653 345889999999887
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecC--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|+|||..+++....+..+ |...+. ++.+++.++++|++|++|++|++..
T Consensus 230 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~s~Dg~i~iwd~~t 289 (342)
T d2ovrb2 230 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT--CLQFNKNFVITSSDDGTVKLWDLKT 289 (342)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEE--EEEECSSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCCEEEEEecccccccccccccceeeecee--ecccCCCeeEEEcCCCEEEEEECCC
Confidence 55578999999999999998888752 234444 4555677999999999999999865
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.49 E-value=6.1e-13 Score=111.20 Aligned_cols=165 Identities=7% Similarity=0.051 Sum_probs=113.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..++..+..+... .. ..++.+++..+++++.++ +.|++||++..++.......+..+|++|+|+|++
T Consensus 106 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~v~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 174 (287)
T d1pgua2 106 LQSFTGDIIKSVRLN--SP--GSAVSLSQNYVAVGLEEG-------NTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 174 (287)
T ss_dssp EETTTCCEEEEEECS--SC--EEEEEECSSEEEEEETTT-------SCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS
T ss_pred eeccceeeeeecccc--ce--eeeeeccCcceeeecccc-------ceeeeeeccccceeeeeeeccCCceeEEEeccCc
Confidence 455567777776654 22 345566666677777765 3899999987766555444455899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC----------CCEEEEEeCCCeEEEEEcCCCCCCCCcc
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE----------SGMMFIANENKKILTYYIPSLGPAPKWC 152 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd----------sgll~sa~ed~~I~~w~Ip~lG~aP~wc 152 (248)
++ ++.|+.|+|||..+++........|..+|++++|+|+ +.+|++|+.|++|++|++..-+.
T Consensus 175 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~----- 249 (287)
T d1pgua2 175 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK----- 249 (287)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC-----
T ss_pred cccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe-----
Confidence 44 4579999999999998776543336899999999874 46899999999999999865221
Q ss_pred ccccchhhhhhcc--ccccc--cCCceeecHhHHhhcCCcccc
Q psy2083 153 GFLDNLTEELEEN--IIENV--YDDYKFVTRQELEDLGLGHLI 191 (248)
Q Consensus 153 s~ld~~tee~e~~--~~~~~--yd~y~fvt~~~l~~l~~~~li 191 (248)
+.+.+..+ ....+ -++-+|+|-.....+.+|..|
T Consensus 250 -----~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i~ 287 (287)
T d1pgua2 250 -----IIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVV 287 (287)
T ss_dssp -----CEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC
T ss_pred -----EEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEEEC
Confidence 11222222 12222 245568887766666666543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.46 E-value=4.6e-13 Score=113.73 Aligned_cols=115 Identities=11% Similarity=0.130 Sum_probs=94.7
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCeEEEE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSVVKIW 97 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIW 97 (248)
|.+.|..++|+||+..|+++|.+++ ..|++||++++++.....|. ..|.+++|+|++ + .++.++.+++|
T Consensus 41 ~~~~v~~~~~spDg~~l~~~~~~~g------~~v~v~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~~~~~~ 112 (360)
T d1k32a3 41 EPLRIRYVRRGGDTKVAFIHGTREG------DFLGIYDYRTGKAEKFEENL--GNVFAMGVDRNGKFAVVANDRFEIMTV 112 (360)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTE------EEEEEEETTTCCEEECCCCC--CSEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEcCCC------CEEEEEECCCCcEEEeeCCC--ceEEeeeecccccccceeccccccccc
Confidence 3678999999999888887766642 27999999998877666655 889999999998 4 45689999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe----------CCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN----------ENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~----------ed~~I~~w~Ip~ 144 (248)
|..+++....+.. |...+.+++|+|||.+|+.+. .++.+++|++..
T Consensus 113 ~~~~~~~~~~~~~-~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~ 168 (360)
T d1k32a3 113 DLETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 168 (360)
T ss_dssp ETTTCCEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred cccccceeeeeec-ccccccchhhccceeeeeeeccccccceeeccccceeeecccc
Confidence 9999999988887 588999999999999998654 345688998764
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2e-12 Score=105.25 Aligned_cols=121 Identities=13% Similarity=0.183 Sum_probs=92.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++.+..+.++ ...|..+.+. +..+++++.|+ +|++||+++.+++.... .+..+|..+.+....
T Consensus 163 ~d~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~ 230 (293)
T d1p22a2 163 WNTSTCEFVRTLNGH-KRGIACLQYR--DRLVVSGSSDN--------TIRLWDIECGACLRVLE-GHEELVRCIRFDNKR 230 (293)
T ss_dssp EETTTCCEEEEEECC-SSCEEEEEEE--TTEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEECCSSE
T ss_pred ecCCCCcEEEEEccc-ccccccccCC--CCeEEEecCCC--------EEEEEecccceeeeeec-ccceeeeeccccceE
Confidence 567788888888876 4666665554 34566766664 99999999998877653 334678776665555
Q ss_pred -eeeeCCCeEEEEECCC---------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLSMDSSVVKIWSKDN---------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~t---------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++++.|+.|+|||..+ ..++.++.+ |..+|++++| |+.+|++|+.|++|++|+
T Consensus 231 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE-HSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC-CSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EEEEcCCCEEEEEECCCCccccccCCceeeEEecC-CCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 4456899999999643 456788888 6999999988 567899999999999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=5e-12 Score=102.77 Aligned_cols=118 Identities=12% Similarity=0.195 Sum_probs=89.4
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCe
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSV 93 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~ 93 (248)
.+...+ ...|.++ .+++..+++|+.|+ +|+|||+.+++++.+.. +|..+|++|+|+++. ++++.|+.
T Consensus 9 ~~~~~~-~~~V~c~--~~d~~~l~sgs~Dg--------~i~vWd~~~~~~~~~l~-~H~~~V~~v~~~~~~l~s~s~D~~ 76 (293)
T d1p22a2 9 HCRSET-SKGVYCL--QYDDQKIVSGLRDN--------TIKIWDKNTLECKRILT-GHTGSVLCLQYDERVIITGSSDST 76 (293)
T ss_dssp ECCCSS-CCCEEEE--ECCSSEEEEEESSS--------CEEEEESSSCCEEEEEC-CCSSCEEEEECCSSEEEEEETTSC
T ss_pred eccCCC-CCCEEEE--EEcCCEEEEEeCCC--------eEEEEECCCCcEEEEEe-cCCCCEeeeecccceeeccccccc
Confidence 343443 5677654 45666777777774 99999999999988763 445899999998766 44568999
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
|++||..++........ . .....++.+..+.++++..++.+.+|++.....
T Consensus 77 i~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (293)
T d1p22a2 77 VRVWDVNTGEMLNTLIH--H-CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127 (293)
T ss_dssp EEEEESSSCCEEEEECC--C-CSCEEEEECCTTEEEEEETTSCEEEEECSSSSC
T ss_pred ccccccccccccccccc--c-ccccccccccccceeecccccceeEeecccccc
Confidence 99999999988877765 2 223345667888999999999999999876543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.33 E-value=6.3e-12 Score=106.53 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=80.6
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee-CC-CeEEEEECCCC
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM-DS-SVVKIWSKDNG 102 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss-dd-~~IKIWD~~tG 102 (248)
-.|+|.+|.+++.++.+ .|.+||+..+..... .|. ..|.+++|+||+ | +++ ++ +.|++||.++|
T Consensus 8 ~~fSP~dG~~~a~~~~g--------~v~v~d~~~~~~~~~-~~~--~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~ 76 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSRG--------QAFIQDVSGTYVLKV-PEP--LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG 76 (360)
T ss_dssp EEEEECGGGCEEEEETT--------EEEEECTTSSBEEEC-SCC--SCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccCCCCCEEEEEECC--------eEEEEECCCCcEEEc-cCC--CCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 45888444544444443 899999988766554 454 789999999998 4 344 33 48999999988
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.. .+.. |...|++++|+|||..|++++.++.+.+|++..
T Consensus 77 ~~~-~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~ 116 (360)
T d1k32a3 77 KAE-KFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET 116 (360)
T ss_dssp CEE-ECCC-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cEE-EeeC-CCceEEeeeecccccccceeccccccccccccc
Confidence 765 4555 589999999999999999999999999999754
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.33 E-value=5.7e-11 Score=98.18 Aligned_cols=126 Identities=10% Similarity=0.174 Sum_probs=102.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+.++++..+ ..+..++|+||+..+++++..+ ++|++||+.+++++...... ..+..+.|++++
T Consensus 17 ~D~~t~~~~~~i~~g--~~p~~va~spdG~~l~v~~~~~-------~~i~v~d~~t~~~~~~~~~~--~~~~~~~~~~~~ 85 (301)
T d1l0qa2 17 IDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-------NDVSIIDTATNNVIATVPAG--SSPQGVAVSPDG 85 (301)
T ss_dssp EETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTS
T ss_pred EECCCCeEEEEEECC--CCceEEEEeCCCCEEEEEECCC-------CEEEEEECCCCceeeeeecc--cccccccccccc
Confidence 688899999999876 5678999999988887666543 48999999999888776443 457899999987
Q ss_pred ---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 86 ---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
++ +.+++.+.+||..+++....+.. ...+.+++++|||..+++++ .+..+.+|+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~ 147 (301)
T d1l0qa2 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (301)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ccccccccccceeeecccccceeeeeccc--cccceEEEeecCCCeeeeeeccccceeeeeccc
Confidence 33 34788999999999999999987 67888999999998876555 567888888654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.29 E-value=7.3e-11 Score=98.65 Aligned_cols=135 Identities=7% Similarity=0.080 Sum_probs=95.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceee--------------------------------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKIL-------------------------------------- 47 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~-------------------------------------- 47 (248)
.|..+++....+..+ ..+..++++|++..+++++.+..+.
T Consensus 120 ~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (337)
T d1pbyb_ 120 YDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV 197 (337)
T ss_dssp EETTTTEEEEEEECC--SSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTE
T ss_pred ccccCCeEEEecccc--CCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccce
Confidence 466778888888765 5788899999888888776542110
Q ss_pred -----------------eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEee
Q psy2083 48 -----------------TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 48 -----------------~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie 109 (248)
++.++.+.+||+.++.........++..+..+.++++. .+.+.++.|++||..+++.+..+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 277 (337)
T d1pbyb_ 198 MATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEE
T ss_pred eeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEccccEEEEECCCCcEEEEEc
Confidence 00111244444444433332222223445556666666 444556899999999999999998
Q ss_pred cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 110 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 110 ~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
. ...+++++|+|||..|++++.+++|.+|+...
T Consensus 278 ~--~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 278 L--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp C--SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred C--CCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 6 67899999999999999999999999999765
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.28 E-value=2.5e-11 Score=110.36 Aligned_cols=129 Identities=9% Similarity=0.000 Sum_probs=97.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec----CCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----HMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----h~~~~pI~sI~F 81 (248)
+|+.+|+++..+..| ..+..++|+||+..+++++.|+ +|++||+.++++..... ..+...+.+..|
T Consensus 47 ~D~~t~~v~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg--------~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~ 116 (432)
T d1qksa2 47 IDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDG--------KVNMIDLWMKEPTTVAEIKIGSEARSIETSKME 116 (432)
T ss_dssp EETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCCEEEEEECCSEEEEEEECCST
T ss_pred EECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEcCCC--------CEEEEEeeCCCceEEEEEecCCCCCCeEEeccc
Confidence 689999999999987 3699999999998888887764 99999999987643321 122245666678
Q ss_pred cCCc--e-ee-eCCCeEEEEECCCCCEEEEeecC----------CCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 82 HDNY--V-LS-MDSSVVKIWSKDNGSLFTCIESG----------DQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~--l-~S-sdd~~IKIWD~~tGk~~~tie~~----------h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
+||+ + ++ +++++|+|||..+++++..+..+ +......+.++|+|..++.+ .++++|.+|+...
T Consensus 117 SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~ 194 (432)
T d1qksa2 117 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 194 (432)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred CCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccC
Confidence 8887 3 33 57999999999999999887641 13345678899999876554 5668999998654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.18 E-value=5.1e-11 Score=98.27 Aligned_cols=109 Identities=9% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE---------E-----ecCCCCCCeeEEEEcCCc--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR---------V-----KDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~---------~-----~~h~~~~pI~sI~F~~d~--l 86 (248)
..+.....++.++..+.+++.+ |.+.+|++....... . ....+..+|++|+|+|++ +
T Consensus 194 ~~~~~~~~~~~~~~~~~~~s~d-------g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 266 (342)
T d1yfqa_ 194 YQIRDVALLPKEQEGYACSSID-------GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETT-------SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE
T ss_pred cceeeeEeecCCCCEEEeecCC-------CeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEE
Confidence 4556666666655544433332 589999987652211 0 112344689999999997 4
Q ss_pred e-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 87 L-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
+ ++.|++|+|||.++++.+.++.. ..++..++|+|++.++++|+.|..+++|
T Consensus 267 asg~~Dg~v~vWD~~~~~~l~~~~~--~~~~~~~~~s~~~~~l~~a~sdd~~~~~ 319 (342)
T d1yfqa_ 267 YTAGSDGIISCWNLQTRKKIKNFAK--FNEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp EEEETTSCEEEEETTTTEEEEECCC--CSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred EEECCCCEEEEEECCCCcEEEEecC--CCCCEEEEEEeCCCEEEEEEcCCcEEEe
Confidence 4 46899999999999999988875 3456678899999999999988877766
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.17 E-value=6.9e-11 Score=105.81 Aligned_cols=126 Identities=9% Similarity=0.040 Sum_probs=90.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec----CCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----HMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----h~~~~pI~sI~F 81 (248)
+|..+|+++.++..| ..+..++|+||+..+++++.|+ +|++||+.++++..+.. .++...+.++.|
T Consensus 47 wD~~t~~~~~~l~~g--~~~~~vafSPDGk~l~~~~~d~--------~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~ 116 (426)
T d1hzua2 47 VDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIGRDA--------RIDMIDLWAKEPTKVAEIKIGIEARSVESSKFK 116 (426)
T ss_dssp EETTTCSEEEEEECC--SSEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCEEEEEEECCSEEEEEEECCST
T ss_pred EECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEeCCC--------CEEEEEccCCceeEEEEEeCCCCCcceEEeeee
Confidence 688899999999987 4689999999998888887774 99999999987654321 222245667788
Q ss_pred cCCc--e-ee-eCCCeEEEEECCCCCEEEEeecCCCCCe-----------eEEEEeCCCCEEEEEeCC-CeEEEEEc
Q psy2083 82 HDNY--V-LS-MDSSVVKIWSKDNGSLFTCIESGDQTQF-----------NNLCHIPESGMMFIANEN-KKILTYYI 142 (248)
Q Consensus 82 ~~d~--l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~~I-----------n~l~~~pdsgll~sa~ed-~~I~~w~I 142 (248)
+||+ + ++ ..++++++||..+++++..+.. |...+ ..+.+++|+..++.+..+ +.+..++.
T Consensus 117 spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~ 192 (426)
T d1hzua2 117 GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST-RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 192 (426)
T ss_dssp TCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC-CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred cCCCCEEEEeecCCCeEEEEcCCccceeEEeec-cCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEe
Confidence 8887 3 33 4799999999999999888775 23333 345556666555555443 45544443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.16 E-value=1.3e-09 Score=89.78 Aligned_cols=126 Identities=9% Similarity=0.132 Sum_probs=97.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.+..+++....+..+ ..+..+.+.|+++.+++++.+. +.+.+|+....+......+. ..+..+.|++++
T Consensus 143 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g 211 (301)
T d1l0qa2 143 INTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-------MSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEG 211 (301)
T ss_dssp EETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECS--SEEEEEEECTTS
T ss_pred eeccccceeeecccC--CCceEEEeeccccceeeecccc-------cccccccccceeeeeccccc--CCcceeeccccc
Confidence 345567777777765 5678889999888888877765 37889998887766655443 557889999987
Q ss_pred ----eeeeC--CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEcCC
Q psy2083 86 ----VLSMD--SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPS 144 (248)
Q Consensus 86 ----l~Ssd--d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~Ip~ 144 (248)
+.+++ +++|++||..+++.+.++.. ...+++++|+|||..|+ +++.+++|.+|++..
T Consensus 212 ~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~--~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t 275 (301)
T d1l0qa2 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275 (301)
T ss_dssp SEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cccccccccceeeeeeeeecCCCeEEEEEcC--CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence 33333 57899999999999999987 56789999999999775 556789999999643
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.14 E-value=1.9e-10 Score=96.45 Aligned_cols=135 Identities=4% Similarity=-0.019 Sum_probs=96.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee------------------eeecCCeeEEEEcCCCceeEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI------------------LTYYIPAFYLYDIRADKPLRV 67 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~------------------~~~~~G~V~LwDlRs~~pl~~ 67 (248)
++..+++.+.++..+ ..+..+.+.|++..++.++..+.. .+...+.+.+||+.++.....
T Consensus 168 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1jmxb_ 168 MDVKTGKYTVALPLR--NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 245 (346)
T ss_dssp ECTTTCCEEEEECST--TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE
T ss_pred EEccCCCEEEEEecC--CCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEE
Confidence 455667777777654 334445555554443322221110 112335789999999876655
Q ss_pred ecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 68 KDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
....+...+..+.++++. ++...++.|++||..+++.+..+.. ...+++++|+|||..|++++.|+.|.+|++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t 322 (346)
T d1jmxb_ 246 EFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322 (346)
T ss_dssp EEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred EeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcC--CCCEEEEEEcCCCCEEEEEeCCCcEEEEECcc
Confidence 433444778889998876 6666667899999999999999886 56799999999999999999999999999865
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.12 E-value=7.3e-10 Score=92.35 Aligned_cols=126 Identities=10% Similarity=0.070 Sum_probs=95.8
Q ss_pred cchhcCceeEEEecCC-CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CC---CCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGD-QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HM---YGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~-~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~---~~~pI~sI~ 80 (248)
+|..+++++.++..++ ...+..++|+||+..+++++..+ |.|.+||+++++++.... +. ++..+..++
T Consensus 16 ~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~-------~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~ 88 (337)
T d1pbyb_ 16 IDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred EECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCC-------CeEEEEECCCCcEEEEEecCCCcccccceeeEE
Confidence 6888999999987543 24578999999887776665543 489999999998876542 21 123456899
Q ss_pred EcCCc--eeee-------------CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VLSM-------------DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~Ss-------------dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ +..+ .+..+.+||..+++....+.. ...+++++|+|||..+++++.+ +.+|+.
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~--~~~~d~ 161 (337)
T d1pbyb_ 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLGRD--LHVMDP 161 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEESSS--EEEEET
T ss_pred EcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc--cCCceEEEEcCCCCEEEEEcCC--cceeee
Confidence 99986 3322 357899999999999999987 6788999999999999999866 455654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.11 E-value=1e-10 Score=104.61 Aligned_cols=92 Identities=10% Similarity=-0.047 Sum_probs=71.0
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEE--eec--CCCCCeeEEEEeCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTC--IES--GDQTQFNNLCHIPE 124 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~t--ie~--~h~~~In~l~~~pd 124 (248)
|+|+|||+.+++.+.+..++ ..+..|+|+||+ ++ ++.|++|++||..++++... +.. +|...+.+++|+||
T Consensus 42 g~v~vwD~~t~~~~~~l~~g--~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spD 119 (426)
T d1hzua2 42 GQIALVDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYE 119 (426)
T ss_dssp TEEEEEETTTCSEEEEEECC--SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCT
T ss_pred CEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCC
Confidence 69999999999999887655 468999999998 44 45789999999999986544 332 12334556777899
Q ss_pred CCEEEEEe-CCCeEEEEEcCCC
Q psy2083 125 SGMMFIAN-ENKKILTYYIPSL 145 (248)
Q Consensus 125 sgll~sa~-ed~~I~~w~Ip~l 145 (248)
|..+++++ .++.+.+|+....
T Consensus 120 G~~l~v~~~~~~~v~i~d~~~~ 141 (426)
T d1hzua2 120 DRYTIAGAYWPPQFAIMDGETL 141 (426)
T ss_dssp TTEEEEEEEESSEEEEEETTTC
T ss_pred CCEEEEeecCCCeEEEEcCCcc
Confidence 99876665 7899999996653
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.09 E-value=4.6e-10 Score=93.99 Aligned_cols=107 Identities=6% Similarity=-0.010 Sum_probs=81.7
Q ss_pred EEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCE
Q psy2083 29 CHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSL 104 (248)
Q Consensus 29 ~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~ 104 (248)
++++++.++++++.++ +|.+||+.+++++.+....++..+.+|+|+||+ +++ +.++.|.+||..+++.
T Consensus 3 a~~~~~~~l~~~~~~~--------~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 3 ALKAGHEYMIVTNYPN--------NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCTTCEEEEEEETTT--------EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cCCCCCcEEEEEcCCC--------EEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCee
Confidence 4567666677777775 899999999998876543334567899999997 344 4789999999999999
Q ss_pred EEEeecCCC------CCeeEEEEeCCCCEEEEEeC------------CCeEEEEEcCC
Q psy2083 105 FTCIESGDQ------TQFNNLCHIPESGMMFIANE------------NKKILTYYIPS 144 (248)
Q Consensus 105 ~~tie~~h~------~~In~l~~~pdsgll~sa~e------------d~~I~~w~Ip~ 144 (248)
+.++... . ..+..++|+|||..+++++. +..+.+|+...
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~ 131 (346)
T d1jmxb_ 75 TFHANLS-SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 131 (346)
T ss_dssp EEEEESC-CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred eeeeccc-ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccc
Confidence 9888752 2 23568999999999988864 56677776543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.83 E-value=3.6e-08 Score=82.22 Aligned_cols=124 Identities=10% Similarity=0.174 Sum_probs=88.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc--ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+++++++.+ +.|..++|+||+..|++++.++ |.|++|++........ .....+..+..|+|+||+ |+
T Consensus 28 ~~~~~~~~~--~~v~~la~spDG~~L~v~~~~d-------~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~ 98 (333)
T d1ri6a_ 28 TLTQVVDVP--GQVQPMVVSPDKRYLYVGVRPE-------FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVF 98 (333)
T ss_dssp EEEEEEECS--SCCCCEEECTTSSEEEEEETTT-------TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEE
T ss_pred EEEEEEcCC--CCEeEEEEeCCCCEEEEEECCC-------CeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEe
Confidence 455666654 7899999999988888777654 4899999987643322 112223557789999998 44
Q ss_pred ee--CCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 88 SM--DSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 88 Ss--dd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.+ +++.|++|+...+........ .+...+.++.++||+..+++++.+ ..|.+|....
T Consensus 99 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~ 159 (333)
T d1ri6a_ 99 VGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 159 (333)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEecc
Confidence 43 688999999887665444331 136778899999999988888754 6788887543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.82 E-value=3.4e-08 Score=89.16 Aligned_cols=92 Identities=11% Similarity=-0.105 Sum_probs=70.0
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCE--EEEeecC--CCCCeeEEEEeCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSL--FTCIESG--DQTQFNNLCHIPE 124 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~--~~tie~~--h~~~In~l~~~pd 124 (248)
|+|.|||+.+++.+.....+ ..+..|+|+||+ ++ ++.|++|++||..+++. ...+..+ |...+.+..|+||
T Consensus 42 g~v~v~D~~t~~v~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpD 119 (432)
T d1qksa2 42 GQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWE 119 (432)
T ss_dssp TEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCT
T ss_pred CEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCC
Confidence 59999999999998887655 468999999998 44 46789999999998874 3444431 1234445566789
Q ss_pred CCEE-EEEeCCCeEEEEEcCCC
Q psy2083 125 SGMM-FIANENKKILTYYIPSL 145 (248)
Q Consensus 125 sgll-~sa~ed~~I~~w~Ip~l 145 (248)
|..| ++++.+++|.+|+....
T Consensus 120 G~~l~vs~~~~~~v~i~d~~t~ 141 (432)
T d1qksa2 120 DKYAIAGAYWPPQYVIMDGETL 141 (432)
T ss_dssp TTEEEEEEEETTEEEEEETTTC
T ss_pred CCEEEEEcCCCCeEEEEeCccc
Confidence 9876 66778999999997653
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=2.1e-08 Score=83.67 Aligned_cols=89 Identities=4% Similarity=0.064 Sum_probs=65.0
Q ss_pred CeeEEEEcCCCce---eEEecCCCCCCeeEEEEcCCc--e-eee-CCCeEEEEECCCCCEEEEe---ecCCCCCeeEEEE
Q psy2083 52 PAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHDNY--V-LSM-DSSVVKIWSKDNGSLFTCI---ESGDQTQFNNLCH 121 (248)
Q Consensus 52 G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~d~--l-~Ss-dd~~IKIWD~~tGk~~~ti---e~~h~~~In~l~~ 121 (248)
++|++||+.+..- +.+.+|. ..|.+|+|+||+ | +++ +++.|++|++..++...++ .. +...+..++|
T Consensus 14 ~~I~v~~~~~~~~l~~~~~~~~~--~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~-~~~~p~~l~~ 90 (333)
T d1ri6a_ 14 QQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LPGSLTHIST 90 (333)
T ss_dssp TEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CSSCCSEEEE
T ss_pred CcEEEEEEcCCCCeEEEEEEcCC--CCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc-cCCCceEEEE
Confidence 4999999976532 3334555 789999999998 4 343 6899999999865433222 22 2466788999
Q ss_pred eCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 122 IPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 122 ~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
+|||..|++++. +.+|..|...
T Consensus 91 spDg~~l~v~~~~~~~v~~~~~~ 113 (333)
T d1ri6a_ 91 DHQGQFVFVGSYNAGNVSVTRLE 113 (333)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCEEeecccCCCceeeeccc
Confidence 999999999985 5688877643
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.73 E-value=2.9e-08 Score=89.03 Aligned_cols=141 Identities=10% Similarity=0.110 Sum_probs=101.0
Q ss_pred ccchhcCceeEEEecC----CCCCeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEE
Q psy2083 5 ELRQDKGSLFTCIESG----DQTQFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDI 79 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~----~~~~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI 79 (248)
..|+.+|+....+..+ +...|.++.|+||+..++.+++..++ ..++.|.+.|||+.+++......|. ..+..+
T Consensus 40 ~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~--~~~~~~ 117 (470)
T d2bgra1 40 VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP--NNTQWV 117 (470)
T ss_dssp EEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--TTEEEE
T ss_pred EEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCC--cccccc
Confidence 3677888877666533 13578999999998887776654333 3456679999999998765544444 679999
Q ss_pred EEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCC-----------------CCCeeEEEEeCCCCEEEEEeCC-CeEEE
Q psy2083 80 KFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGD-----------------QTQFNNLCHIPESGMMFIANEN-KKILT 139 (248)
Q Consensus 80 ~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h-----------------~~~In~l~~~pdsgll~sa~ed-~~I~~ 139 (248)
.|+||+ |+...++.+.+|+..+|+.......+. ......+.|+|||..|+.+..| ..+..
T Consensus 118 ~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~ 197 (470)
T d2bgra1 118 TWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPL 197 (470)
T ss_dssp EECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCE
T ss_pred ccccCcceeeEeecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCce
Confidence 999998 777778899999999988765432210 1223557899999999988755 45777
Q ss_pred EEcCCCCC
Q psy2083 140 YYIPSLGP 147 (248)
Q Consensus 140 w~Ip~lG~ 147 (248)
|.++..+.
T Consensus 198 ~~~~~~~~ 205 (470)
T d2bgra1 198 IEYSFYSD 205 (470)
T ss_dssp EEEEECCS
T ss_pred EEEEeecc
Confidence 77665544
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.68 E-value=2.6e-07 Score=78.83 Aligned_cols=130 Identities=10% Similarity=0.014 Sum_probs=90.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCCCceeEEecCCCCCCe-------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRADKPLRVKDHMYGLPI------- 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI------- 76 (248)
+|..+|+.+.++..+ ....++|+||+..+++++.+..- .+..++.|.+||+++++++...... ..+.
T Consensus 52 ~D~~tg~~~~~~~~~---~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~~~~~~~ 127 (373)
T d2madh_ 52 LDAGSGSILGHVNGG---FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP-DAPRFDVGPYS 127 (373)
T ss_pred EECCCCCEEEEEeCC---CCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecC-CcceeEeccCC
Confidence 567899999998876 23478999999888877654321 4456689999999999887664322 1222
Q ss_pred eEEEEcCCc----eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE-EEEeCCCeEEEEEcCC
Q psy2083 77 RDIKFHDNY----VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPS 144 (248)
Q Consensus 77 ~sI~F~~d~----l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll-~sa~ed~~I~~w~Ip~ 144 (248)
..+.|++++ +... .++.+.+|+..+++...... ...++.++|+|..+ ++++.|+++.+|+...
T Consensus 128 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~ 196 (373)
T d2madh_ 128 WMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS-----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAG 196 (373)
T ss_pred CcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec-----cceeEEEecCCCcEEEEEcCCCeEEEEEcCC
Confidence 456777775 2222 35677888888776654433 34578899999655 5778899999998654
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.59 E-value=5.5e-07 Score=75.83 Aligned_cols=101 Identities=9% Similarity=0.024 Sum_probs=72.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCCCceeEEec-CC-----CCCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRADKPLRVKD-HM-----YGLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs~~pl~~~~-h~-----~~~pI~ 77 (248)
+|..+|+.+.++..+ .+..++|+||+..+++++..... .+..+|.|++||+.+++++.... +. .+....
T Consensus 33 ~D~~tg~~~~~~~~g---~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~ 109 (355)
T d2bbkh_ 33 IDGEAGRVIGMIDGG---FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW 109 (355)
T ss_dssp EETTTTEEEEEEEEC---SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG
T ss_pred EECCCCcEEEEEECC---CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCc
Confidence 678899999999875 34478999999888766543211 34456799999999998876532 11 112346
Q ss_pred EEEEcCCc----eee-eCCCeEEEEECCCCCEEEEee
Q psy2083 78 DIKFHDNY----VLS-MDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 78 sI~F~~d~----l~S-sdd~~IKIWD~~tGk~~~tie 109 (248)
.+.|++++ +.+ +.+..+.+||..+++.+.++.
T Consensus 110 ~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 146 (355)
T d2bbkh_ 110 MTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 146 (355)
T ss_dssp GEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred eEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEe
Confidence 78999997 223 357789999999998877655
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.55 E-value=1.3e-07 Score=79.85 Aligned_cols=109 Identities=9% Similarity=0.113 Sum_probs=74.0
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCC----------CCeeEEEEcCCc----eeee
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYG----------LPIRDIKFHDNY----VLSM 89 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~----------~pI~sI~F~~d~----l~Ss 89 (248)
+....++++++.++.++.+ |.+.+||+.+++..... ...+. .....+.+++++ +.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~ 268 (355)
T d2bbkh_ 197 INHPAYSQKAGRLVWPTYT--------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD 268 (355)
T ss_dssp CSCCEEETTTTEEEEEBTT--------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred eeeccccCCCCeEEEecCC--------CeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEec
Confidence 4445666666655555444 48999999988643221 10000 123457888876 2222
Q ss_pred C---------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC--EEEEEeCCCeEEEEEcC
Q psy2083 90 D---------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG--MMFIANENKKILTYYIP 143 (248)
Q Consensus 90 d---------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg--ll~sa~ed~~I~~w~Ip 143 (248)
+ .+.|.+||..+++.+.++.. ...+.+++|+|||. +++++..|++|.+|++.
T Consensus 269 ~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~--~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~ 331 (355)
T d2bbkh_ 269 QRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331 (355)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred cCCceeecCCCCeEEEEeCCCCcEEEEecC--CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECC
Confidence 2 25799999999999999986 56789999999997 44556678999999954
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.53 E-value=7.1e-07 Score=75.98 Aligned_cols=96 Identities=9% Similarity=0.030 Sum_probs=71.2
Q ss_pred eEEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e-e-eeCCCeEEEEE
Q psy2083 26 NNLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V-L-SMDSSVVKIWS 98 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l-~-Ssdd~~IKIWD 98 (248)
..+++++++..++....++.. ....+++|.+||+.+++++....++ ..+..++|+||+ + + .+.|++|+|||
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~--~~~~~~a~spDG~~~l~vt~~~d~~v~v~D 347 (373)
T d2madh_ 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCC--CCeeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence 345666666655544333222 4445579999999999998887665 678999999996 2 3 35799999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCC
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pd 124 (248)
..+|+.+.++.. +....+.+++.++
T Consensus 348 ~~tg~~~~~~~~-~g~~P~~l~~~~~ 372 (373)
T d2madh_ 348 AGAGDQDQSTVE-LGSGPQVLSVMNE 372 (373)
T ss_pred CCCCCEEEEECC-CCCCCcEEEEecC
Confidence 999999999986 3567777887654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.43 E-value=8.6e-07 Score=76.55 Aligned_cols=131 Identities=8% Similarity=-0.113 Sum_probs=86.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC--ceeeeecCCeeEEEEcCCCceeEEec-CCC-----CCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYIPAFYLYDIRADKPLRVKD-HMY-----GLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d--~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~-----~~pI~ 77 (248)
+|..+|+.+..+..+. ...++++||+..+++++.. ....|+.+++|.+||+.+++++.... +.. +..-.
T Consensus 51 ~d~~~~~~~~~~~~~~---~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~ 127 (368)
T d1mdah_ 51 SCAGCGVTLGHSLGAF---LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH 127 (368)
T ss_dssp EETTTTEEEEEEEECT---TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred EeCCCCcEEEEEeCCC---CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCcc
Confidence 4688899999988762 3468899998887766431 11134456799999999999877542 211 12234
Q ss_pred EEEEcCCc--e-ee-eCCCeEEEEECCCCCEEEEeecCCCC-------CeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 78 DIKFHDNY--V-LS-MDSSVVKIWSKDNGSLFTCIESGDQT-------QFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 78 sI~F~~d~--l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~-------~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
.++|+||+ + ++ .+++.|.+||..+++....+... .. ....+.+++||.+++....+.....|
T Consensus 128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~ 200 (368)
T d1mdah_ 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA-SCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS-SCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeecc-CcceEccCCCceEEEEcCCCCEEEEEecCCceeee
Confidence 79999998 3 33 36889999999999999888751 11 11234455566555555544444333
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.05 E-value=9.1e-06 Score=72.19 Aligned_cols=105 Identities=12% Similarity=0.175 Sum_probs=75.4
Q ss_pred EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec----CCCCCCeeEEEEcCCc--eee-eC---------
Q psy2083 27 NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----HMYGLPIRDIKFHDNY--VLS-MD--------- 90 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----h~~~~pI~sI~F~~d~--l~S-sd--------- 90 (248)
++.+.+++..+ .. .+ |.+.+||+.+++.....+ ..+...|.++.|+||+ |+. ++
T Consensus 21 ~~~W~~d~~~~-~~-~~--------~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~ 90 (470)
T d2bgra1 21 SLRWISDHEYL-YK-QE--------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (470)
T ss_dssp CCEECSSSEEE-EE-SS--------SCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred CCEeCCCCEEE-EE-cC--------CcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeecc
Confidence 45677765433 32 23 379999999997654432 1233679999999998 443 33
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.+.|||+.+|+. ..+.. ++..+..+.|+|||..|+... +..+.+|..+.
T Consensus 91 ~~~~~l~d~~~~~~-~~l~~-~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~ 141 (470)
T d2bgra1 91 TASYDIYDLNKRQL-ITEER-IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPN 141 (470)
T ss_dssp EEEEEEEETTTTEE-CCSSC-CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred CceEEEEECCCCcc-ccccc-CCccccccccccCcceeeEee-cccceEEECCC
Confidence 35788999998874 45666 478899999999999999865 66788887654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.98 E-value=7.3e-06 Score=70.48 Aligned_cols=94 Identities=6% Similarity=-0.034 Sum_probs=66.8
Q ss_pred eEEEEeCCCCcEEEeecCc-eeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e-ee-eCCCeEEEEEC
Q psy2083 26 NNLCHIPESGMMFIANENK-KILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V-LS-MDSSVVKIWSK 99 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~-~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l-~S-sdd~~IKIWD~ 99 (248)
..++++++++.++.+..++ .+.......|.+||+.+++++....++ ..+.+++|+||+ + ++ +.++.|+|||.
T Consensus 267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~--~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~ 344 (368)
T d1mdah_ 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC--CceeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence 3467778777766543322 112222347999999999988876655 678999999996 3 33 46899999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~p 123 (248)
.+|+.+.+++. ....+.+++-+
T Consensus 345 ~tgk~~~~i~~--g~~P~~l~~~~ 366 (368)
T d1mdah_ 345 ASDQDQSSVEL--DKGPESLSVQN 366 (368)
T ss_dssp SSCEEEEECCC--CSCCCEEECCC
T ss_pred CCCCEEEEEEC--CCCCCEEEEec
Confidence 99999999986 34456666543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.54 E-value=0.0002 Score=65.34 Aligned_cols=102 Identities=7% Similarity=-0.038 Sum_probs=77.5
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCC--------
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSS-------- 92 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~-------- 92 (248)
.....+.||+.+++++...+ +.|.++|+++.++..+..-.++..+..+.|+|++ +++....
T Consensus 74 ~s~t~gtpDGr~lfV~d~~~-------~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg 146 (441)
T d1qnia2 74 ISMTDGRYDGKYLFINDKAN-------TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDG 146 (441)
T ss_dssp EEEETTEEEEEEEEEEETTT-------TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSS
T ss_pred cceecccCCCCEEEEEcCCC-------CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcc
Confidence 34444568888888776554 4899999999988766544445789999999986 4443332
Q ss_pred ----------eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 93 ----------VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 93 ----------~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
.+..+|..+.+....+.. ...+.++.++|||+.+++++.+.
T Consensus 147 ~~~~~~~~~~~~~~iD~~t~~v~~qI~v--~~~p~~v~~spdGk~a~vt~~ns 197 (441)
T d1qnia2 147 TDFSLDNSYTMFTAIDAETMDVAWQVIV--DGNLDNTDADYTGKYATSTCYNS 197 (441)
T ss_dssp SCCCGGGEEEEEEEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCT
T ss_pred cccccccccceEEeecCccceeeEEEec--CCCccceEECCCCCEEEEEecCC
Confidence 345699999998888887 56788999999999999998764
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.54 E-value=0.0052 Score=50.69 Aligned_cols=127 Identities=14% Similarity=0.252 Sum_probs=84.3
Q ss_pred cCceeEEEecC-CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-CCCCeeEEEEcCCc--
Q psy2083 10 KGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-YGLPIRDIKFHDNY-- 85 (248)
Q Consensus 10 ~G~~~~~~~~~-~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-~~~pI~sI~F~~d~-- 85 (248)
.|+.+.++... +......+++.++ |.++.+.... +.|.+||.. ++.+...... .......|++.+++
T Consensus 143 ~g~~~~~~g~~~~~~~~~~i~~d~~-g~i~v~d~~~-------~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i 213 (279)
T d1q7fa_ 143 NGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRA-------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEI 213 (279)
T ss_dssp TSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGG-------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCE
T ss_pred CCceeecccccccccccceeeeccc-eeEEeeeccc-------cceeeeecC-CceeeeecccccccCCcccccccCCeE
Confidence 56666766422 2345566776664 4555555543 489999974 5666655321 12345789999998
Q ss_pred eee-e-CCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 86 VLS-M-DSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 86 l~S-s-dd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
+++ + +++.|.++|.+ |+.+.++... .......+++.|||. |++++.+.+|++|..-++-|
T Consensus 214 ~Vad~~~~~~v~~f~~~-G~~~~~~~~~~~~~~p~~vav~~dG~-l~V~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 214 LIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp EEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEECSCCCC
T ss_pred EEEECCCCcEEEEECCC-CCEEEEEeCCCCCCCEeEEEEeCCCc-EEEEeCCCeEEEEEeeeecC
Confidence 333 2 35579999964 9999888751 123578899999986 55667789999999887744
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.50 E-value=0.002 Score=54.83 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=80.2
Q ss_pred eeEEEEeCCCC----cEEEeecCceeeeecCCeeEEEEcCCCceeEEe----c-CCC-CCCeeEEEEcCCc---eeeeCC
Q psy2083 25 FNNLCHIPESG----MMFIANENKKILTYYIPAFYLYDIRADKPLRVK----D-HMY-GLPIRDIKFHDNY---VLSMDS 91 (248)
Q Consensus 25 V~~~~~~~~~g----~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~----~-h~~-~~pI~sI~F~~d~---l~Ssdd 91 (248)
-|.+++.|++. .++.+.... +.|..||+.....+..+ . ... ...--.+++..++ ++....
T Consensus 174 pNGi~~~~d~d~~~~~lyv~d~~~-------~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~ 246 (314)
T d1pjxa_ 174 PNGIAVRHMNDGRPYQLIVAETPT-------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTT-------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eeeeEECCCCCcceeEEEEEeecc-------cceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCC
Confidence 46777877543 344443332 48999998765333211 1 110 0123578998887 444468
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCCCCCcccc
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSLGPAPKWCGF 154 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ 154 (248)
+.|.+||.+.|+....+.. ....++++||.||+. +.++.+.+++|..++.|.-|.- .-|+.
T Consensus 247 g~I~~~dp~~g~~~~~i~~-p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~~-~~~~~ 308 (314)
T d1pjxa_ 247 SHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGKK-QYCET 308 (314)
T ss_dssp TEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBCC-CGGGS
T ss_pred CEEEEEeCCCCEEEEEEEC-CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCChh-hhccc
Confidence 8899999999988888876 146788999999997 5555567799999998876643 34443
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.47 E-value=0.0009 Score=60.86 Aligned_cols=135 Identities=10% Similarity=-0.027 Sum_probs=88.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeee----------cCCeeEEEEcCCCceeEEecCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTY----------YIPAFYLYDIRADKPLRVKDHMYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~----------~~G~V~LwDlRs~~pl~~~~h~~~~ 74 (248)
+|..+++....++-.+......++|+|++..++ +++++..+.-- .-+.+..+|..+.+......-+ .
T Consensus 99 IDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~--~ 176 (441)
T d1qnia2 99 IRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD--G 176 (441)
T ss_dssp EETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEES--S
T ss_pred EECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEecC--C
Confidence 677888877766533346788999998877543 33333211000 0023456888887665543322 3
Q ss_pred CeeEEEEcCCc---eeee-C----------------------------------------CCeEEEEECCCCCEEEEeec
Q psy2083 75 PIRDIKFHDNY---VLSM-D----------------------------------------SSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ss-d----------------------------------------d~~IKIWD~~tGk~~~tie~ 110 (248)
....+.|+|++ .+++ + ++++.||+..+.+.+.++..
T Consensus 177 ~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPv 256 (441)
T d1qnia2 177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPV 256 (441)
T ss_dssp CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECC
T ss_pred CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeC
Confidence 46788888886 2222 1 45777888777777888876
Q ss_pred CCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
......+.++|||.+++++ ..+++|.+|++..
T Consensus 257 --gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k 289 (441)
T d1qnia2 257 --PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289 (441)
T ss_dssp --BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred --CCCccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence 4556789999999987665 5679999999754
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.44 E-value=0.0019 Score=54.03 Aligned_cols=123 Identities=11% Similarity=0.142 Sum_probs=79.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
++...+.++++..+ ..+.++++.||+.++++...+ ++|..||....... ..... ..++.++|++++
T Consensus 14 ~~~~~~v~~~~p~~--~~~e~iAv~pdG~l~vt~~~~--------~~I~~i~p~g~~~~-~~~~~--~~~~gla~~~dG~ 80 (302)
T d2p4oa1 14 ELAPAKIITSFPVN--TFLENLASAPDGTIFVTNHEV--------GEIVSITPDGNQQI-HATVE--GKVSGLAFTSNGD 80 (302)
T ss_dssp CCCCEEEEEEECTT--CCEEEEEECTTSCEEEEETTT--------TEEEEECTTCCEEE-EEECS--SEEEEEEECTTSC
T ss_pred cCCcccEEEECCCC--CCcCCEEECCCCCEEEEeCCC--------CEEEEEeCCCCEEE-EEcCC--CCcceEEEcCCCC
Confidence 44456778888765 478899999976655444444 37888885543222 22222 568999999998
Q ss_pred --eeeeCCCeEEEEECCC--CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLSMDSSVVKIWSKDN--GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~t--Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++...++.+..|+... +....-.........|++++.+++.++++.+.++.+..++.
T Consensus 81 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~ 141 (302)
T d2p4oa1 81 LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 141 (302)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred eEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeec
Confidence 3344666676776543 33222222111467899999999988888777787776654
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.28 E-value=0.0051 Score=53.07 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=74.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEE---ecCCCCCCeeEEEEcCCc----eeeeCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRV---KDHMYGLPIRDIKFHDNY----VLSMDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~---~~h~~~~pI~sI~F~~d~----l~Ssdd~~I 94 (248)
..+..+.|+|++.+++++.... ..|.+|++... ..... .....+..-..+.|+|++ ++.-.+++|
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g~-------d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V 217 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLTA-------NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CcceEEEECCCCCEEEEeeCCC-------CEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEE
Confidence 4578999999988888775432 27899987654 22211 122234567899999997 333468899
Q ss_pred EEEECCCCCEE--EEeec----------------CCCCCeeEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC
Q psy2083 95 KIWSKDNGSLF--TCIES----------------GDQTQFNNLCHIPESGMMFIANEN------KKILTYYIPSLG 146 (248)
Q Consensus 95 KIWD~~tGk~~--~tie~----------------~h~~~In~l~~~pdsgll~sa~ed------~~I~~w~Ip~lG 146 (248)
.+||..+++.. ..... .+......+.++|||..|++++.. ..|..|.+...|
T Consensus 218 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g 293 (365)
T d1jofa_ 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred EEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCC
Confidence 99998765432 22110 001124578999999999988642 237777765544
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.0066 Score=54.49 Aligned_cols=142 Identities=8% Similarity=0.106 Sum_probs=88.1
Q ss_pred cchhcCceeEEEecC--CCCCeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~--~~~~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F 81 (248)
.|+.+|+.-..+... ..-.+.+..++||+..++.+..-.++ -.++.|.+-+||+.++.+.... .......+....|
T Consensus 42 ~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~w 121 (465)
T d1xfda1 42 WNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGW 121 (465)
T ss_dssp BCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCB
T ss_pred EECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeee
Confidence 566666654334322 12356777889988876655443332 3456789999999998654332 2222245667899
Q ss_pred cCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCe-----------------eEEEEeCCCCEEEEEe-CCCeEEEEE
Q psy2083 82 HDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF-----------------NNLCHIPESGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 82 ~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I-----------------n~l~~~pdsgll~sa~-ed~~I~~w~ 141 (248)
+||+ |+=..++.|-+.+..+++..+-...+....| ..+-|+|||..|+... ++..|..|.
T Consensus 122 SPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~ 201 (465)
T d1xfda1 122 GPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (465)
T ss_dssp CSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred ccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceee
Confidence 9998 4434456677777776665443322101111 3466899999888876 567888888
Q ss_pred cCCCCC
Q psy2083 142 IPSLGP 147 (248)
Q Consensus 142 Ip~lG~ 147 (248)
+|..+.
T Consensus 202 ~~~~~~ 207 (465)
T d1xfda1 202 LPTYTG 207 (465)
T ss_dssp ECCCSS
T ss_pred cccccc
Confidence 876543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.64 E-value=0.079 Score=43.15 Aligned_cols=122 Identities=9% Similarity=0.060 Sum_probs=75.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc---
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--- 85 (248)
.|+...++..........+++.+++ .++.+.... +.+.++|.. ++.+.... ..+......|++.+++
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G-~i~v~~~~~-------~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~ 171 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKV-------MRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIF 171 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTT-------TEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred cccceeecCCCcccccceeccccCC-cEEEEeecc-------ceeeEeccC-CceeecccccccccccceeeeccceeEE
Confidence 5666666654433445566666544 444443332 267777753 44444432 2222467789999887
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
++....+.|+++|.. |+.+.++-. +.......+|+.|+|.++++-.. +..|.+|+
T Consensus 172 v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~ 228 (279)
T d1q7fa_ 172 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 228 (279)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred eeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC
Confidence 333467899999975 888888742 12345778999999997665443 45688875
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.62 E-value=0.017 Score=49.62 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=70.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC------------------CCCCCeeEEEEcCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH------------------MYGLPIRDIKFHDN 84 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h------------------~~~~pI~sI~F~~d 84 (248)
.....++|+|++..++++++.+ ++|.+||+..++......+ ........|.++|+
T Consensus 193 ~gPr~i~f~pdg~~~yv~~e~~-------~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spd 265 (365)
T d1jofa_ 193 DHPRWVAMHPTGNYLYALMEAG-------NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS 265 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT
T ss_pred CceEEEEECCCCceEEEeccCC-------CEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCC
Confidence 4678899999888888888765 4999999977643322111 00112347899999
Q ss_pred c--eeee---CC----CeEEEEECCC-CCEEEE--ee-c-CCCCCeeEEEEeC-CCCEEEEEeC-CCeEEEEEcC
Q psy2083 85 Y--VLSM---DS----SVVKIWSKDN-GSLFTC--IE-S-GDQTQFNNLCHIP-ESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 85 ~--l~Ss---dd----~~IKIWD~~t-Gk~~~t--ie-~-~h~~~In~l~~~p-dsgll~sa~e-d~~I~~w~Ip 143 (248)
+ +..+ ++ ..|-+|+... |..... +. . ......+.++++| +|.+|+++++ +++|.+|.+.
T Consensus 266 G~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 266 GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEe
Confidence 8 4333 22 2366666654 332211 11 0 0123567899998 7887888864 5899999764
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.31 E-value=0.1 Score=43.25 Aligned_cols=123 Identities=15% Similarity=0.209 Sum_probs=77.6
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC---CCeeEEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG---LPIRDIKF 81 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~---~pI~sI~F 81 (248)
.+|+.+|+. ..+.-. ..+..+++.+++++ +.++.+ -+.++|..+++.....+...+ ..++++.+
T Consensus 44 r~d~~~g~~-~~~~~~--~~~~~i~~~~dg~l-~va~~~---------gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~v 110 (295)
T d2ghsa1 44 ELHLASGRK-TVHALP--FMGSALAKISDSKQ-LIASDD---------GLFLRDTATGVLTLHAELESDLPGNRSNDGRM 110 (295)
T ss_dssp EEETTTTEE-EEEECS--SCEEEEEEEETTEE-EEEETT---------EEEEEETTTCCEEEEECSSTTCTTEEEEEEEE
T ss_pred EEECCCCeE-EEEECC--CCcEEEEEecCCCE-EEEEeC---------ccEEeecccceeeEEeeeecCCCcccceeeEE
Confidence 456655543 333332 35677777776554 444554 388999999865433332222 35789999
Q ss_pred cCCc---eeeeC----CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEc
Q psy2083 82 HDNY---VLSMD----SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYI 142 (248)
Q Consensus 82 ~~d~---l~Ssd----d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~I 142 (248)
.+++ +.+.+ .+.-.+|...+|+....+.. ....|.++++|++..+. +-+..++|..|++
T Consensus 111 d~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~--~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~ 177 (295)
T d2ghsa1 111 HPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTKVNRLMRVPL 177 (295)
T ss_dssp CTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE--ESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred CCCCCEEEEeccccccccceeEeeecCCcEEEEeec--cCCcceeeecCCCceEEEeecccceeeEeee
Confidence 9998 33322 23456777777776555544 56778999999997554 5556788988876
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.31 E-value=0.13 Score=42.81 Aligned_cols=133 Identities=10% Similarity=0.064 Sum_probs=75.1
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHD 83 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~ 83 (248)
.+++.++.....+... ....+.+++.+++.++++...+.. ..+.|...|...........+.. ....+.+.+.+
T Consensus 65 ri~p~g~~~~~~~~~~-~~~p~gla~~~dG~l~va~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~ 139 (319)
T d2dg1a1 65 KINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFK----STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS 139 (319)
T ss_dssp EECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSS----SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT
T ss_pred EEECCCCeEEEEEeCC-CCCeeEEEECCCCCEEEEecCCCc----cceeEEEEcCCCceeeeeccCCCcccCCcceeEEe
Confidence 3556555544444333 356788888887654444322210 11345555655554433333221 23578899999
Q ss_pred Cc-eeeeC--------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 84 NY-VLSMD--------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 84 d~-l~Ssd--------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
++ +.-+| .+.+..++.+ |+.+..+..+ -...|.++|+||++.|+.+ +..++|..|++..
T Consensus 140 ~G~l~vtd~~~~~~~~~g~v~~~~~d-g~~~~~~~~~-~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~ 208 (319)
T d2dg1a1 140 KGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVTPIIQN-ISVANGIALSTDEKVLWVTETTANRLHRIALED 208 (319)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTT-SCCEEEEEEE-ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccceeecccccccccCcceeEEEecc-cceeEEEeec-cceeeeeeeccccceEEEecccCCceEEEEEcC
Confidence 98 33222 1235555555 4444443321 4567899999999866555 5678999998754
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.12 E-value=0.069 Score=43.04 Aligned_cols=107 Identities=5% Similarity=0.004 Sum_probs=64.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee--eCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS--MDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S--sdd~~IKIWD~ 99 (248)
.....+++.+++ .++.+.... +.|..+|...........-.. ..-..|++.+++ |.. ...+.|..++.
T Consensus 140 ~~p~~i~~~~~g-~~~v~~~~~-------~~i~~~d~~~~~~~~~~~~~~-~~p~gi~~d~~g~l~vsd~~~~~i~~~~~ 210 (260)
T d1rwia_ 140 NDPDGVAVDNSG-NVYVTDTDN-------NRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLA 210 (260)
T ss_dssp CSCCEEEECTTC-CEEEEEGGG-------TEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTTTEEEEECT
T ss_pred CCcceeeecCCC-CEeeecccc-------ccccccccccceeeeeecccc-CCCccceeeeeeeeeeeecCCCEEEEEeC
Confidence 455677777755 455544433 379999988664433322222 234789999887 333 34566666776
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
..+ ....+....-....++++.++|.++++-..+.+|.-
T Consensus 211 ~~~-~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~ 249 (260)
T d1rwia_ 211 GST-TSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK 249 (260)
T ss_dssp TCS-CCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CCC-eEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEE
Confidence 643 333332211346789999999987666566666654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.11 E-value=0.081 Score=44.22 Aligned_cols=101 Identities=12% Similarity=0.127 Sum_probs=67.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEE----ecCCCCCCeeEEEEcCCc---eeeeCCC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRV----KDHMYGLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~----~~h~~~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
..+.++++|++..++.+.... +.|..||+.... +... ...... .--.+++..++ ++....+
T Consensus 178 ~pnGia~s~dg~~lyvad~~~-------~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~-~PdGl~vD~~G~l~Va~~~~g 249 (319)
T d2dg1a1 178 VANGIALSTDEKVLWVTETTA-------NRLHRIALEDDGVTIQPFGATIPYYFTGHE-GPDSCCIDSDDNLYVAMYGQG 249 (319)
T ss_dssp SEEEEEECTTSSEEEEEEGGG-------TEEEEEEECTTSSSEEEEEEEEEEECCSSS-EEEEEEEBTTCCEEEEEETTT
T ss_pred eeeeeeeccccceEEEecccC-------CceEEEEEcCCCceeccccceeeeccCCcc-ceeeeeEcCCCCEEEEEcCCC
Confidence 457889999887776665543 489999987541 2111 111111 12468998887 4445688
Q ss_pred eEEEEECCCCCEEEEeec-----CCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 93 VVKIWSKDNGSLFTCIES-----GDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~-----~h~~~In~l~~~pdsgll~sa~e 133 (248)
.|.++|. +|+.+..+.. ++...+.+++|.|++..+++...
T Consensus 250 ~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 250 RVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp EEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred EEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 9999997 5999999974 11225789999998877766654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=95.93 E-value=0.027 Score=46.63 Aligned_cols=66 Identities=6% Similarity=0.063 Sum_probs=50.1
Q ss_pred CCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 74 LPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
..+.+|+++||+ +++ ..++.|..||.. |+....... ...+++++|.|||.++++...+..+..++.
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~~--~~~~~gla~~~dG~l~v~~~~~~~~~~~~~ 96 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSL 96 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCEEEEEcC--CCCcceEEEcCCCCeEEEecCCceEEEEEe
Confidence 468899999998 334 358888888876 554443443 678999999999999888888887776653
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.63 E-value=0.14 Score=41.11 Aligned_cols=109 Identities=6% Similarity=0.003 Sum_probs=65.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
.....+++.+++ .++.+.... +.+..++............+. .....|++++++ ++......|..+|.
T Consensus 98 ~~p~~iavd~~g-~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~~~v~~~~~~~i~~~d~ 168 (260)
T d1rwia_ 98 NYPEGLAVDTQG-AVYVADRGN-------NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTDNNRVVKLEA 168 (260)
T ss_dssp CSEEEEEECTTC-CEEEEEGGG-------TEEEEECTTCSSCEECCCCSC-CSCCEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eecccccccccc-eeEeecccc-------ccccccccccceeeeeeeccc-CCcceeeecCCCCEeeecccccccccccc
Confidence 345677766644 455443332 256666665543222111121 234789999887 33345677888888
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+.......... .....+.+++.++|.++++-...++|..++
T Consensus 169 ~~~~~~~~~~~-~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~ 209 (260)
T d1rwia_ 169 ESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLL 209 (260)
T ss_dssp TTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred ccceeeeeecc-ccCCCccceeeeeeeeeeeecCCCEEEEEe
Confidence 75444333223 245678999999998877777778888774
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.42 E-value=0.36 Score=39.73 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=69.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC------ceeE-EecCCCCCCeeEEEEc
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD------KPLR-VKDHMYGLPIRDIKFH 82 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~------~pl~-~~~h~~~~pI~sI~F~ 82 (248)
.|+....+..- ..-|.+++++++..++.+.+.. +.|..||+... ++.. ....+.....-.+++.
T Consensus 137 ~g~~~~~~~~~--~~~Ng~~~s~d~~~l~~~dt~~-------~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD 207 (295)
T d2ghsa1 137 KGKVTKLFADI--SIPNSICFSPDGTTGYFVDTKV-------NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 207 (295)
T ss_dssp TTEEEEEEEEE--SSEEEEEECTTSCEEEEEETTT-------CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred CCcEEEEeecc--CCcceeeecCCCceEEEeeccc-------ceeeEeeecccccccccceEEEeccCcccccccceEEc
Confidence 44443333332 4568888888877666665544 37888887432 1211 1111212345678888
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEe
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIAN 132 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ 132 (248)
.++ ++.-..+.|..+|.+ |+.+..++- -...++++||- ||...|++.+
T Consensus 208 ~~GnlWva~~~~g~V~~~dp~-G~~~~~i~l-P~~~~T~~~FGG~d~~~LyvTt 259 (295)
T d2ghsa1 208 AEGHIWNARWGEGAVDRYDTD-GNHIARYEV-PGKQTTCPAFIGPDASRLLVTS 259 (295)
T ss_dssp TTSCEEEEEETTTEEEEECTT-CCEEEEEEC-SCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCEEeeeeCCCceEEecCC-CcEeeEecC-CCCceEEEEEeCCCCCEEEEEE
Confidence 887 333367789899975 999999985 13568999996 6766665543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.95 E-value=0.15 Score=39.81 Aligned_cols=77 Identities=9% Similarity=0.200 Sum_probs=50.3
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee--C--CC--eEEEEECCCCCEEEEeecC------CCCCee
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM--D--SS--VVKIWSKDNGSLFTCIESG------DQTQFN 117 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss--d--d~--~IKIWD~~tGk~~~tie~~------h~~~In 117 (248)
.|-++|+.++++.....+. ..+....|+||+ |+ .+ + .. .|-+.+..+|+... +... ......
T Consensus 22 dl~~~d~~~g~~~~Lt~~~--~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~-lt~~~~~~~~~~~~~~ 98 (281)
T d1k32a2 22 DLWEHDLKSGSTRKIVSNL--GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR-ITYFSGKSTGRRMFTD 98 (281)
T ss_dssp EEEEEETTTCCEEEEECSS--SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE-CCCCCEEEETTEECSE
T ss_pred cEEEEECCCCCEEEEecCC--CcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE-eeecCCCccCcccccc
Confidence 5888899999876554443 567889999998 33 22 1 22 36677887776543 3210 012456
Q ss_pred EEEEeCCCCEEEEEe
Q psy2083 118 NLCHIPESGMMFIAN 132 (248)
Q Consensus 118 ~l~~~pdsgll~sa~ 132 (248)
...|+|||..|+...
T Consensus 99 ~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 99 VAGFDPDGNLIISTD 113 (281)
T ss_dssp EEEECTTCCEEEEEC
T ss_pred ccccCCCCCEEEEEE
Confidence 788999999887654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.62 E-value=0.38 Score=37.40 Aligned_cols=107 Identities=12% Similarity=0.167 Sum_probs=56.8
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee-CCCe--EEEEEC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM-DSSV--VKIWSK 99 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss-dd~~--IKIWD~ 99 (248)
....+++++..++.++..++ ...|.++|+..+...... ..........|+|++ + ..+ +.+. |-+.|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~ 202 (269)
T d2hqsa1 130 TEPTWFPDSQNLAFTSDQAG-----RPQVYKVNINGGAPQRIT--WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 202 (269)
T ss_dssp EEEEECTTSSEEEEEECTTS-----SCEEEEEETTSSCCEECC--CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred cccccccccccceecccccC-----CceEeeeecccccceeee--cccccccccccccccceeEEEeecCCceeeeEeec
Confidence 34445555554444333221 125666666665332222 223566778899997 3 333 4444 444555
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCC--eEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENK--KILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~--~I~~w~I 142 (248)
..+.. .+.. +.......+|+|||..|+..+ ..+ .+.++++
T Consensus 203 ~~~~~--~~~~-~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~ 245 (269)
T d2hqsa1 203 ATGGV--QVLS-STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 245 (269)
T ss_dssp TTCCE--EECC-CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccc--eEee-cCccccceEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 54443 3333 255667889999998775444 433 4555554
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=94.07 E-value=0.44 Score=39.54 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=63.8
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCC---eeEEEEcCCc-e-eeeC---------
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLP---IRDIKFHDNY-V-LSMD--------- 90 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~p---I~sI~F~~d~-l-~Ssd--------- 90 (248)
-+.+++.++++.++++.... .|...|..............+.+ .+.+.|.+++ + ++..
T Consensus 73 P~Gl~~~~dg~~l~vad~~~--------~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~ 144 (314)
T d1pjxa_ 73 PAGCQCDRDANQLFVADMRL--------GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EEEEEECSSSSEEEEEETTT--------EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred ceeEEEeCCCCEEEEEECCC--------eEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccc
Confidence 35688888777777776554 57888876653222221121222 4789999987 2 2211
Q ss_pred -------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-----EEEEEeCCCeEEEEEcC
Q psy2083 91 -------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-----MMFIANENKKILTYYIP 143 (248)
Q Consensus 91 -------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-----ll~sa~ed~~I~~w~Ip 143 (248)
.+.|-.++. +|+......+ -...|.++|+|++. +.++-+..++|..|++.
T Consensus 145 ~~~~~~~~G~v~~~~~-dg~~~~~~~~--~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~ 206 (314)
T d1pjxa_ 145 TRSMQEKFGSIYCFTT-DGQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp CBTTSSSCEEEEEECT-TSCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred cceeccCCceEEEEee-cCceeEeeCC--cceeeeeEECCCCCcceeEEEEEeecccceEEeecc
Confidence 123333343 3555444443 45568999999874 45555677889888764
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.31 E-value=0.16 Score=45.08 Aligned_cols=88 Identities=7% Similarity=0.113 Sum_probs=57.7
Q ss_pred CeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCc---eeeeC---------CCeEEEEECCCCCEEEEeecC--CCCC
Q psy2083 52 PAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNY---VLSMD---------SSVVKIWSKDNGSLFTCIESG--DQTQ 115 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~---l~Ssd---------d~~IKIWD~~tGk~~~tie~~--h~~~ 115 (248)
|.|.+||+.+++..... ..-...++.+..|+||+ +++.+ .+.+-|+|+.+|+.. .+.+. ....
T Consensus 37 g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~-~l~~~~~~~~~ 115 (465)
T d1xfda1 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLDPPEVSNAK 115 (465)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECCCTTCCSCC
T ss_pred CcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee-eccCccCCccc
Confidence 58999999988653332 22223578888999997 44433 356778999988753 33320 1345
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 116 FNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 116 In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+....|+|||..|+-.. ++.|.+..
T Consensus 116 l~~~~wSPDG~~iafv~-~~nl~~~~ 140 (465)
T d1xfda1 116 LQYAGWGPKGQQLIFIF-ENNIYYCA 140 (465)
T ss_dssp CSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred cceeeeccCCceEEEEe-cceEEEEe
Confidence 66789999998887766 44444433
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=91.69 E-value=1.3 Score=39.83 Aligned_cols=50 Identities=10% Similarity=0.211 Sum_probs=39.4
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.|.-||..+|+.+-+++. ..+.++=.++-.|+++|+|+.|+.++.|+..
T Consensus 457 G~l~AiD~~tGk~~W~~~~--~~p~~gg~lstagglVF~G~~dg~l~A~Da~ 506 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (573)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccEEEeCCCCCceEeeecC--CCCCCCceEEEcCCEEEEECCCCeEEEEECC
Confidence 3577899999999888875 4555544455689999999999999988854
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=91.00 E-value=2.5 Score=37.79 Aligned_cols=51 Identities=10% Similarity=0.141 Sum_probs=39.5
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|.-||..+|+.+-.+.. ..+..+=.+.-.|+++|+|+.|++++.|+.-.
T Consensus 438 G~l~A~D~~tGk~~W~~~~--~~~~~gg~l~TagglVF~G~~dg~l~A~Da~t 488 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (560)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cceEEEeCCCCeEeeeccC--CCCCCCceeEECCCEEEEECCCCcEEEEECCC
Confidence 4678899999999888775 44554444555789999999999999988543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.82 E-value=0.94 Score=40.97 Aligned_cols=76 Identities=9% Similarity=0.103 Sum_probs=50.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPESG 126 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pdsg 126 (248)
|.|.-+|+.+++.++..... .|+.+=...-. + |. ++.|+.++-+|.+||+.+-+++. ...++. +.+..||.
T Consensus 466 G~l~AiD~~TG~i~W~~~~~--~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~--~~~~~~~P~ty~~~G~ 541 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT--GSGIVSPPITWEQDGE 541 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETTE
T ss_pred CeEEEEcCCCCcEEeecCCC--CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEEC--CCCccccCEEEEECCE
Confidence 68899999999888876443 45443112222 2 43 45699999999999999999886 343332 56667884
Q ss_pred -EEEEE
Q psy2083 127 -MMFIA 131 (248)
Q Consensus 127 -ll~sa 131 (248)
+|+++
T Consensus 542 qYv~i~ 547 (582)
T d1flga_ 542 QYLGVT 547 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 44443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.74 E-value=2.7 Score=32.15 Aligned_cols=111 Identities=7% Similarity=0.094 Sum_probs=64.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee-CCC--eEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM-DSS--VVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss-dd~--~IKI 96 (248)
..+.+-+|+|||..|+-+.... ....+.+.|...+.+.....+. ..+....|+|++ ++ .+ .++ .+-.
T Consensus 39 ~~~~sP~wSPDGk~IAf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~i~~~~~~~~~~~~~~ 111 (269)
T d2hqsa1 39 QPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLAFALSKTGSLNLYV 111 (269)
T ss_dssp SCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEEEECCS--SCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CceeeeEECCCCCEEEEEEeec-----cCcceeeeecccCceeEEeeee--cccccceecCCCCeeeEeeecCCccceee
Confidence 5677889999998877544432 1246778888887665544444 677889999998 22 23 232 3333
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+............. ........+++++..++.. ..++...+|..
T Consensus 112 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~ 156 (269)
T d2hqsa1 112 MDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 156 (269)
T ss_dssp EETTTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cccccccceeeeec--cccccccccccccccceecccccCCceEeee
Confidence 44444444443333 3444455677777655444 44555555543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=87.44 E-value=3.2 Score=33.69 Aligned_cols=90 Identities=11% Similarity=0.036 Sum_probs=54.1
Q ss_pred eeEEEEcCCCcee--EEecCCCCCCeeEEEEcCCc--ee-ee-CCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCC
Q psy2083 53 AFYLYDIRADKPL--RVKDHMYGLPIRDIKFHDNY--VL-SM-DSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPES 125 (248)
Q Consensus 53 ~V~LwDlRs~~pl--~~~~h~~~~pI~sI~F~~d~--l~-Ss-dd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pds 125 (248)
.+.+||..+++.. ......+......+.+.+++ ++ ++ +.+.+.+||..++.- ..+.. .....-..++..+||
T Consensus 53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w-~~~~~~~~~r~~~~~~~~~dG 131 (387)
T d1k3ia3 53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW-IPGPDMQVARGYQSSATMSDG 131 (387)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE-EECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcc-cccccccccccccceeeecCC
Confidence 4779999987432 11111111233466788887 33 33 457899999997653 33321 001223467888999
Q ss_pred CEEEEEeCC------CeEEEEEcC
Q psy2083 126 GMMFIANEN------KKILTYYIP 143 (248)
Q Consensus 126 gll~sa~ed------~~I~~w~Ip 143 (248)
.+++.++.+ ..+..|+..
T Consensus 132 ~v~v~GG~~~~~~~~~~v~~yd~~ 155 (387)
T d1k3ia3 132 RVFTIGGSWSGGVFEKNGEVYSPS 155 (387)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETT
T ss_pred ceeeeccccccccccceeeeecCC
Confidence 999998753 357888753
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.07 E-value=6.1 Score=31.47 Aligned_cols=148 Identities=9% Similarity=-0.011 Sum_probs=88.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIW 97 (248)
...+..+++..-++.++.+.... +.|...++...........+ -.....|+++|.. +.-+ .....+||
T Consensus 78 ~~~p~~iAvD~~~~~lY~~d~~~-------~~I~~~~~dg~~~~~l~~~~-l~~p~~l~vdp~~g~ly~t~~~~~~~~I~ 149 (263)
T d1npea_ 78 LGSPEGIALDHLGRTIFWTDSQL-------DRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (263)
T ss_dssp CCCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred cccccEEEEeccCCeEEEeccCC-------CEEEEEecCCceEEEEeccc-ccCCcEEEEecccCcEEEeecCCCCcEEE
Confidence 34667788877677777665543 38999998866433332222 1356899999875 4333 22334565
Q ss_pred ECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCce
Q psy2083 98 SKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~ 175 (248)
-.. +|.....+-...-...+.+++.+.++.|..+. ..++|...++-. .....|...+.+...-++|+++-
T Consensus 150 r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g--------~~~~~v~~~~~~P~~lav~~~~l 221 (263)
T d1npea_ 150 TSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ--------PGRRKVLEGLQYPFAVTSYGKNL 221 (263)
T ss_dssp EEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE--------EEEEEEEECCCSEEEEEEETTEE
T ss_pred EecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCC--------CCeEEEECCCCCcEEEEEECCEE
Confidence 332 24444444321145678999999888887764 567887776532 22233333333333557899999
Q ss_pred eecHhHHhhc
Q psy2083 176 FVTRQELEDL 185 (248)
Q Consensus 176 fvt~~~l~~l 185 (248)
|+|...-..+
T Consensus 222 Ywtd~~~~~I 231 (263)
T d1npea_ 222 YYTDWKTNSV 231 (263)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCEE
Confidence 9996554433
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=86.92 E-value=1.7 Score=39.40 Aligned_cols=75 Identities=11% Similarity=0.020 Sum_probs=48.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCc-e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNY-V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPESG 126 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~-l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pdsg 126 (248)
|.+.-||+.+++.++.+.+. .++.+=..+ ..+ | +++.|+.++-+|.+||+.+-+++. ...++. +.+.-||.
T Consensus 453 G~l~A~D~~TG~~~W~~~~~--~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~--~~~~~a~P~tY~~dGk 528 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI--PSGAIGYPMTYTHKGT 528 (596)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETTE
T ss_pred ceEEEEeCCCCceecccCCC--CCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEEC--CCCcccCCeEEEECCE
Confidence 68999999999988876444 333321112 222 3 355799999999999999998875 333322 34555774
Q ss_pred -EEEE
Q psy2083 127 -MMFI 130 (248)
Q Consensus 127 -ll~s 130 (248)
+|++
T Consensus 529 QYvav 533 (596)
T d1w6sa_ 529 QYVAI 533 (596)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 3443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=86.00 E-value=4.7 Score=35.69 Aligned_cols=100 Identities=10% Similarity=0.040 Sum_probs=70.0
Q ss_pred EEEEeC---CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC--c--eeee-CC-------
Q psy2083 27 NLCHIP---ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN--Y--VLSM-DS------- 91 (248)
Q Consensus 27 ~~~~~~---~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d--~--l~Ss-dd------- 91 (248)
.+.+-+ ||.++|+....+ +.|..-|++.-+...+....+...+..+...++ . |++. ..
T Consensus 89 ~~S~TdGtyDGrylFVNDkan-------~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pnd 161 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKAN-------TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVND 161 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTT-------TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred cccccCCccceeEEEEEcCCC-------ceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCC
Confidence 444443 677888776543 489999999988765544445566777766543 2 4442 21
Q ss_pred -----------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 92 -----------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 92 -----------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
+++-.+|.++.+....+.. ...+..+.++|||+++++.|.+.
T Consensus 162 g~~l~d~~~y~~~~t~ID~~tm~V~~QV~V--~g~ld~~~~s~dGK~af~TsyNS 214 (459)
T d1fwxa2 162 GTNMEDVANYVNVFTAVDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNS 214 (459)
T ss_dssp SSSTTCGG-EEEEEEEEETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCT
T ss_pred CccccchhhcceEEEEEecCCceEEEEeee--CCChhccccCCCCCEEEEEeccc
Confidence 3467789999888777776 45677899999999999998654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=85.93 E-value=3.1 Score=37.13 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=60.3
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCc-ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNY-VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPESG 126 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~-l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pdsg 126 (248)
|.+.-||+.+++.++..... .+..+=... ..+ |. ++.|+.++-+|.+||+.+-+++. ...+.. +.+.-||.
T Consensus 438 G~l~A~D~~tGk~~W~~~~~--~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l--~~~~~~~P~ty~~dGk 513 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA--QSGIVAAPMTFELAGR 513 (560)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETTE
T ss_pred cceEEEeCCCCeEeeeccCC--CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEEC--CCCccccCEEEEECCE
Confidence 67899999999988876443 343321122 123 33 45699999999999999999886 343332 45556774
Q ss_pred -EEEEEeC--------------------CCeEEEEEcCCCCCCC
Q psy2083 127 -MMFIANE--------------------NKKILTYYIPSLGPAP 149 (248)
Q Consensus 127 -ll~sa~e--------------------d~~I~~w~Ip~lG~aP 149 (248)
+|++++- .+.|.+|-+|.=.+.|
T Consensus 514 qyv~v~aG~g~~~~~~~~~~~~~~~~~~g~~l~~F~L~g~~~~~ 557 (560)
T d1kv9a2 514 QYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLP 557 (560)
T ss_dssp EEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCC
T ss_pred EEEEEEeCCCcccccccccccccccCCCCCEEEEEEeCCCCCCC
Confidence 4444332 2468888887554444
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=84.77 E-value=1.3 Score=34.00 Aligned_cols=54 Identities=17% Similarity=0.095 Sum_probs=34.2
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CC---CeEEEEEcCCCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-EN---KKILTYYIPSLGP 147 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed---~~I~~w~Ip~lG~ 147 (248)
+-|-+.|+.+|+.. .|.. +...+...+|+|||..|+... .+ ....+|-++..+.
T Consensus 21 ~dl~~~d~~~g~~~-~Lt~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 21 DDLWEHDLKSGSTR-KIVS-NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp TEEEEEETTTCCEE-EEEC-SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred CcEEEEECCCCCEE-EEec-CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence 34555588877754 5554 267888999999998877553 22 2344555544433
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=82.88 E-value=1.9 Score=38.67 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=49.5
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeE--EEEcCCcee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRD--IKFHDNYVL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPESG 126 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~s--I~F~~d~l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pdsg 126 (248)
|.+.-||+.+++-++...+. .|..+ +.-....|. ++.|+.++.+|.+||+.+-++.. ...+.. +.+.-||.
T Consensus 457 G~l~AiD~~tGk~~W~~~~~--~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~--~~~~~~~P~ty~~~Gk 532 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT--GTGVVAAPSTYMVDGR 532 (573)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETTE
T ss_pred ccEEEeCCCCCceEeeecCC--CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEEC--CCCccccCEEEEECCE
Confidence 57889999999988876443 33332 222222243 45799999999999999998886 343332 44556775
Q ss_pred -EEEEE
Q psy2083 127 -MMFIA 131 (248)
Q Consensus 127 -ll~sa 131 (248)
+|+++
T Consensus 533 QYv~v~ 538 (573)
T d1kb0a2 533 QYVSVA 538 (573)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 34443
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.49 E-value=7.2 Score=32.96 Aligned_cols=113 Identities=4% Similarity=-0.002 Sum_probs=63.3
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee-C-----------
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM-D----------- 90 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss-d----------- 90 (248)
...+.+|++..++.+-+.+ |+...+|+++|+.+++.+-..-.. ....++.|++|+ + .+. +
T Consensus 128 ~~~~~Spd~~~la~s~d~~---G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~ 202 (430)
T d1qfma1 128 RGYAFSEDGEYFAYGLSAS---GSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (430)
T ss_dssp EEEEECTTSSEEEEEEEET---TCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred cceEecCCCCEEEEEeccc---cCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCccccccc
Confidence 4556778776655332221 233459999999999865432111 122568888886 2 222 1
Q ss_pred ----CCeEEEEECCCCCE--EEEeecC-CCCCeeEEEEeCCCCEEEEEeC---CCeEEEEEcC
Q psy2083 91 ----SSVVKIWSKDNGSL--FTCIESG-DQTQFNNLCHIPESGMMFIANE---NKKILTYYIP 143 (248)
Q Consensus 91 ----d~~IKIWD~~tGk~--~~tie~~-h~~~In~l~~~pdsgll~sa~e---d~~I~~w~Ip 143 (248)
...|..|.+.++.. ..-++.. +...+-++..++|+..++.... +....+|.++
T Consensus 203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d 265 (430)
T d1qfma1 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (430)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEee
Confidence 23577777766422 2233321 1234556778999988775432 3455666653
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=82.02 E-value=1.9 Score=36.31 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=52.2
Q ss_pred eEEEEeCCCCcEEEeecC--ceeee---ecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc------------eee
Q psy2083 26 NNLCHIPESGMMFIANEN--KKILT---YYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------------VLS 88 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d--~~~~~---~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~------------l~S 88 (248)
-++...|+ |..+.+++. .++.. ...|.|.++|+.++++....-.-.+.+.....|+|.+ |..
T Consensus 38 EDi~~~~d-g~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 38 EDLEILPN-GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CEEEECTT-SEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceEEECCC-CcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 35666774 565544432 11110 1138999999998765332211001122222344332 211
Q ss_pred ----eCCCeEEEEECCCCC-E---EEEeecCCCCCeeEEEEeCCCCEEEE
Q psy2083 89 ----MDSSVVKIWSKDNGS-L---FTCIESGDQTQFNNLCHIPESGMMFI 130 (248)
Q Consensus 89 ----sdd~~IKIWD~~tGk-~---~~tie~~h~~~In~l~~~pdsgll~s 130 (248)
....+|.|++...+. . +.++........|++++..+++++++
T Consensus 117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~T 166 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYAT 166 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEE
T ss_pred EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEe
Confidence 124467777764332 2 22343311356899999999987777
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=81.45 E-value=2.8 Score=37.68 Aligned_cols=52 Identities=6% Similarity=-0.025 Sum_probs=38.7
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
..+.|.-+|.+||+.+-.... ..+..+=.++-.++++|+|+.|+.++.|+..
T Consensus 442 ~~G~l~AiD~~TG~~~W~~~~--~~~~~~g~l~TagglVf~G~~dg~l~A~Da~ 493 (571)
T d2ad6a1 442 EMGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred CcccEEEeccCCCceeeEcCC--CCCCCcceeEecCCEEEEECCCCeEEEEECC
Confidence 456899999999998877764 3333333344568899999999999988753
|