Psyllid ID: psy227


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQP
ccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
cccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEccccccHHHHHHHHHHHHcHHHccccccHcccHHHHHcccccccccHHHHHHHHHHHccccccEEEEccc
METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLargcadgtifhcscatpskKATAKAIKNsfqwggcgdnvrwgAQFARSFTDILENERDIQTQRNLRLIDAamfdeknnRNYMLNVMNLhnnkagrkidtyqp
METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVmnlhnnkagrkidtyqp
METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQP
*****ASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNL**************
************FFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCS************IKNSFQWGGCGDNVRWGAQFARSFTD*****************************YMLNVMNLHNNKAG*KI*****
METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCA********KAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQP
********CRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATP****T***IKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTY**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METVQASFCRRLFFRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query139 2.2.26 [Sep-21-2011]
Q2QLA5 360 Protein Wnt-2 OS=Equus ca yes N/A 0.712 0.275 0.411 3e-17
Q2QL85 360 Protein Wnt-2 OS=Microceb N/A N/A 0.712 0.275 0.411 3e-17
Q2IBG1 360 Protein Wnt-2 OS=Eulemur N/A N/A 0.712 0.275 0.411 3e-17
Q2QLH2 360 Protein Wnt-2 OS=Otolemur N/A N/A 0.712 0.275 0.411 3e-17
Q09YN1 360 Protein Wnt-2 OS=Oryctola yes N/A 0.712 0.275 0.411 3e-17
Q108U2 360 Protein Wnt-2 OS=Loxodont yes N/A 0.712 0.275 0.411 3e-17
Q07E31 360 Protein Wnt-2 OS=Neofelis N/A N/A 0.712 0.275 0.411 5e-17
A0M8T2 360 Protein Wnt-2 OS=Felis ca N/A N/A 0.712 0.275 0.411 5e-17
Q07E18 360 Protein Wnt-2 OS=Mustela N/A N/A 0.712 0.275 0.411 5e-17
Q09YI4 360 Protein Wnt-2 OS=Ovis ari N/A N/A 0.712 0.275 0.411 6e-17
>sp|Q2QLA5|WNT2_HORSE Protein Wnt-2 OS=Equus caballus GN=WNT2 PE=3 SV=1 Back     alignment and function desciption
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 65/124 (52%), Gaps = 25/124 (20%)

Query: 12  LFFR--LNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQW 69
           LF R  L  +RE   VYA+ SA + + + R C+ G +  CSC  P KK TAK  K +F W
Sbjct: 96  LFGRVLLRSSRESAFVYAISSAGVVFAITRACSQGELRSCSC-DPKKKGTAKDSKGTFDW 154

Query: 70  GGCGDNVRWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNK 129
           GGC DN+ +G +FAR+F D    ER  +  R L                    MNLHNN+
Sbjct: 155 GGCSDNIDYGIKFARAFVD--AKERKGKDARAL--------------------MNLHNNR 192

Query: 130 AGRK 133
           AGRK
Sbjct: 193 AGRK 196




Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.
Equus caballus (taxid: 9796)
>sp|Q2QL85|WNT2_MICMU Protein Wnt-2 OS=Microcebus murinus GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q2IBG1|WNT2_EULMM Protein Wnt-2 OS=Eulemur macaco macaco GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q2QLH2|WNT2_OTOGA Protein Wnt-2 OS=Otolemur garnettii GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q09YN1|WNT2_RABIT Protein Wnt-2 OS=Oryctolagus cuniculus GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q108U2|WNT2_LOXAF Protein Wnt-2 OS=Loxodonta africana GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q07E31|WNT2_NEONE Protein Wnt-2 OS=Neofelis nebulosa GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|A0M8T2|WNT2_FELCA Protein Wnt-2 OS=Felis catus GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q07E18|WNT2_MUSPF Protein Wnt-2 OS=Mustela putorius furo GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q09YI4|WNT2_SHEEP Protein Wnt-2 OS=Ovis aries GN=WNT2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query139
91082825 303 PREDICTED: similar to Wnt11 protein [Tri 0.791 0.363 0.425 7e-20
270008220 378 hypothetical protein TcasGA2_TC014270 [T 0.791 0.291 0.425 1e-19
237784114 258 Wnt1 [Octopus bimaculoides] 0.661 0.356 0.415 2e-16
405968198 396 Protein Wnt-1 [Crassostrea gigas] 0.633 0.222 0.4 7e-16
343958018 388 Wnt1 protein [Platynereis dumerilii] 0.697 0.25 0.364 1e-15
73976637 360 PREDICTED: protein Wnt-2 [Canis lupus fa 0.712 0.275 0.419 1e-15
395539270 409 PREDICTED: protein Wnt-2 [Sarcophilus ha 0.683 0.232 0.406 2e-15
444523837 379 Protein Wnt-2 [Tupaia chinensis] 0.712 0.261 0.411 2e-15
431911778 331 Protein Wnt-2 [Pteropus alecto] 0.712 0.299 0.411 2e-15
116077800 285 wingless-type MMTV integration site fami 0.683 0.333 0.406 2e-15
>gi|91082825|ref|XP_969261.1| PREDICTED: similar to Wnt11 protein [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 10/120 (8%)

Query: 18  GTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVR 77
            TREQ  VYA+ SAA+TYT+AR CA GT++HC+CA    +       ++FQWGGCGDN+ 
Sbjct: 45  ATREQAYVYAISSAALTYTMARACASGTLYHCTCAGKPDEPP----NSNFQWGGCGDNIH 100

Query: 78  WGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYM---LNVMNLHNNKAGRKI 134
           WG  FA+ F D +E + ++   R  R      +DE      +   +  +NLHNN+ GR+I
Sbjct: 101 WGVYFAKRFIDNVE-KNNVDKSRKRR--KGYEYDEDRKSKLVREEIAAVNLHNNRVGRRI 157




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008220|gb|EFA04668.1| hypothetical protein TcasGA2_TC014270 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|237784114|gb|ACR19850.1| Wnt1 [Octopus bimaculoides] Back     alignment and taxonomy information
>gi|405968198|gb|EKC33294.1| Protein Wnt-1 [Crassostrea gigas] Back     alignment and taxonomy information
>gi|343958018|emb|CAD37164.2| Wnt1 protein [Platynereis dumerilii] Back     alignment and taxonomy information
>gi|73976637|ref|XP_854963.1| PREDICTED: protein Wnt-2 [Canis lupus familiaris] Back     alignment and taxonomy information
>gi|395539270|ref|XP_003771595.1| PREDICTED: protein Wnt-2 [Sarcophilus harrisii] Back     alignment and taxonomy information
>gi|444523837|gb|ELV13641.1| Protein Wnt-2 [Tupaia chinensis] Back     alignment and taxonomy information
>gi|431911778|gb|ELK13926.1| Protein Wnt-2 [Pteropus alecto] Back     alignment and taxonomy information
>gi|116077800|gb|AAY88983.2| wingless-type MMTV integration site family member 2 precursor [Atelerix albiventris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query139
UNIPROTKB|J9P796 360 WNT2 "Protein Wnt" [Canis lupu 0.647 0.25 0.446 4.8e-21
UNIPROTKB|F1SJD8 360 WNT2 "Protein Wnt" [Sus scrofa 0.647 0.25 0.436 8.4e-21
UNIPROTKB|A4D7S0 360 WNT2 "Protein Wnt-2" [Bos taur 0.647 0.25 0.436 1.1e-20
MGI|MGI:98954 360 Wnt2 "wingless-related MMTV in 0.647 0.25 0.425 2.5e-20
UNIPROTKB|Q2QL96 360 WNT2 "Protein Wnt-2" [Monodelp 0.618 0.238 0.420 3.2e-20
UNIPROTKB|Q07DZ8 361 WNT2 "Protein Wnt-2" [Ornithor 0.647 0.249 0.425 3.3e-20
UNIPROTKB|Q2IBD1 360 Wnt2 "Protein Wnt" [Rattus nor 0.647 0.25 0.414 7.3e-20
UNIPROTKB|Q8UW39 350 WNT2 "Protein Wnt" [Takifugu r 0.647 0.257 0.436 1e-19
UNIPROTKB|P09544 360 WNT2 "Protein Wnt-2" [Homo sap 0.647 0.25 0.414 2.2e-19
UNIPROTKB|Q2QLE7 360 WNT2 "Protein Wnt-2" [Pan trog 0.647 0.25 0.414 2.2e-19
UNIPROTKB|J9P796 WNT2 "Protein Wnt" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 210 (79.0 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
 Identities = 42/94 (44%), Positives = 56/94 (59%)

Query:    12 LFFR--LNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQW 69
             LF R  L  +RE   VYA+ SA + + + R C+ G +  CSC  P KK TAK  K SF W
Sbjct:    96 LFGRVLLRSSRESAFVYAVSSAGVVFAITRACSQGELKSCSC-DPKKKGTAKDSKGSFDW 154

Query:    70 GGCGDNVRWGAQFARSFTDILENE-RDIQTQRNL 102
             GGC DN+ +G +FAR+F D  E + +D +   NL
Sbjct:   155 GGCSDNIDYGIKFARAFVDAKERKGKDARALMNL 188


GO:0005578 "proteinaceous extracellular matrix" evidence=IEA
GO:0016055 "Wnt receptor signaling pathway" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0005102 "receptor binding" evidence=IEA
UNIPROTKB|F1SJD8 WNT2 "Protein Wnt" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A4D7S0 WNT2 "Protein Wnt-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:98954 Wnt2 "wingless-related MMTV integration site 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QL96 WNT2 "Protein Wnt-2" [Monodelphis domestica (taxid:13616)] Back     alignment and assigned GO terms
UNIPROTKB|Q07DZ8 WNT2 "Protein Wnt-2" [Ornithorhynchus anatinus (taxid:9258)] Back     alignment and assigned GO terms
UNIPROTKB|Q2IBD1 Wnt2 "Protein Wnt" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8UW39 WNT2 "Protein Wnt" [Takifugu rubripes (taxid:31033)] Back     alignment and assigned GO terms
UNIPROTKB|P09544 WNT2 "Protein Wnt-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QLE7 WNT2 "Protein Wnt-2" [Pan troglodytes (taxid:9598)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query139
pfam00110 308 pfam00110, wnt, wnt family 5e-27
smart00097 305 smart00097, WNT1, found in Wnt-1 1e-23
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score =  101 bits (254), Expect = 5e-27
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 26/116 (22%)

Query: 18  GTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVR 77
           GTRE   VYA+ SA + + + R C++G +  C C    +    ++    ++WGGC DN++
Sbjct: 64  GTRETAFVYAISSAGVVHAVTRACSEGNLESCGC---DRSRRGRSGPGGWEWGGCSDNIK 120

Query: 78  WGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRK 133
           +G +F+R F D  E  RD +                         MNLHNN+AGRK
Sbjct: 121 FGIRFSREFLDARERGRDARAL-----------------------MNLHNNEAGRK 153


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 139
KOG3913|consensus 356 100.0
smart00097 305 WNT1 found in Wnt-1. 100.0
PF00110 310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 100.0
>KOG3913|consensus Back     alignment and domain information
Probab=100.00  E-value=2.1e-39  Score=275.06  Aligned_cols=99  Identities=37%  Similarity=0.752  Sum_probs=89.8

Q ss_pred             hhccCchhhHHHHHHHHHHHHHHHHhhhcCCCCCCcccCCCCCccchhhhcCCccccCCCcchHhHHHHHHhhhhhhhhh
Q psy227           14 FRLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENE   93 (139)
Q Consensus        14 ~~~~gtREtAfvyAisSAgv~~~ItraCs~G~l~~CgC~~~~~~~~~~~~~~~~~WgGCsdnV~~G~~fsr~Fld~~e~~   93 (139)
                      ++++|+||+||||||+||||+|+|||||++|.|..||||...++.+.   +++|+||||||||+||++|||.|||++|+.
T Consensus       106 ~l~~g~REsAFv~AIssAgV~havtraCs~G~l~~CgCd~~~~~~~~---~~~w~WGGCsDnv~fG~~fsr~FlD~re~~  182 (356)
T KOG3913|consen  106 LLSRGTRETAFVYAISSAGVAHAVTRACSQGNLESCGCDPSPNGKSG---PEGWEWGGCSDNVDFGIRFSRKFLDAREKR  182 (356)
T ss_pred             hhcccchHHHHHHHHHHhHHHHHHHHHhcCCCCCCcCCCCCCCCCCC---CCCccccCCCCchHHHHHHHHHhccccccc
Confidence            45679999999999999999999999999999999999987765544   366999999999999999999999988865


Q ss_pred             hhhhhhHhHHHHHHHhhhhhhhhhhHHHHHHhhhhHHHHhhhhcC
Q psy227           94 RDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQ  138 (139)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mnlHNn~aGR~av~~~  138 (139)
                      +                       |++.+||||||+|||+||+++
T Consensus       183 ~-----------------------d~r~lmnlHNNeaGR~av~~~  204 (356)
T KOG3913|consen  183 K-----------------------DARALMNLHNNEAGRKAVKKN  204 (356)
T ss_pred             c-----------------------CHHHHHHHhhhHHHHHHHHHh
Confidence            4                       899999999999999999864



>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query139
4f0a_B 316 Crystal Structure Of Xwnt8 In Complex With The Cyst 5e-10
>pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316 Back     alignment and structure

Iteration: 1

Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 26/116 (22%) Query: 17 NGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNV 76 + TRE V+A+ SA + YTL R C+ G +C C + + WGGC DN Sbjct: 59 SATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGC---DDSRNGRIGGRGWVWGGCSDNA 115 Query: 77 RWGAQFARSFTDILENERDIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGR 132 +G + ++ F D LE +D + +MNLHNN+AGR Sbjct: 116 EFGERISKLFVDGLETGQDARA-----------------------LMNLHNNEAGR 148 Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query139
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 9e-15
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score = 68.5 bits (166), Expect = 9e-15
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 20  REQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWG 79
           RE   V+A+ SA + YTL R C+ G   +C C         +     + WGGC DN  +G
Sbjct: 62  RETSFVHAISSAGVMYTLTRNCSMGDFDNCGC---DDSRNGRIGGRGWVWGGCSDNAEFG 118

Query: 80  AQFARSFTDILENERDIQTQRNL 102
            + ++ F D LE  +D +   NL
Sbjct: 119 ERISKLFVDGLETGQDARALMNL 141


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query139
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 100.0
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=100.00  E-value=2.7e-38  Score=264.40  Aligned_cols=98  Identities=36%  Similarity=0.641  Sum_probs=89.1

Q ss_pred             hccCchhhHHHHHHHHHHHHHHHHhhhcCCCCCCcccCCCCCccchhhhcCCccccCCCcchHhHHHHHHhhhhhhhhhh
Q psy227           15 RLNGTREQGIVYALGSAAITYTLARGCADGTIFHCSCATPSKKATAKAIKNSFQWGGCGDNVRWGAQFARSFTDILENER   94 (139)
Q Consensus        15 ~~~gtREtAfvyAisSAgv~~~ItraCs~G~l~~CgC~~~~~~~~~~~~~~~~~WgGCsdnV~~G~~fsr~Fld~~e~~~   94 (139)
                      +++|+||+||||||+||||+|+||+||++|.|..|+||...++++.   .++|+||||||||.||++||+.|||++|..+
T Consensus        57 l~~g~REtAFv~AissAgv~~avtraCs~G~l~~C~Cd~~~~~~~~---~~~w~WgGCsdnv~~G~~fsr~F~D~~e~~~  133 (316)
T 4f0a_B           57 LRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIG---GRGWVWGGCSDNAEFGERISKLFVDGLETGQ  133 (316)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCCCCCTTTTSEE---ETTEEECSCCCCHHHHHHHHHHHHHHHCCSS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCc---ccCceeCCccchhHHHHHHHHHHhccccccc
Confidence            5689999999999999999999999999999999999988766543   2689999999999999999999999988643


Q ss_pred             hhhhhHhHHHHHHHhhhhhhhhhhHHHHHHhhhhHHHHhhhhcC
Q psy227           95 DIQTQRNLRLIDAAMFDEKNNRNYMLNVMNLHNNKAGRKIDTYQ  138 (139)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~mnlHNn~aGR~av~~~  138 (139)
                                             +++.+||||||+|||+||+++
T Consensus       134 -----------------------d~r~lmnlHNn~aGR~~v~~~  154 (316)
T 4f0a_B          134 -----------------------DARALMNLHNNEAGRLAVKET  154 (316)
T ss_dssp             -----------------------SHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----------------------cHHHHHHhhchHHHHHHHHhc
Confidence                                   789999999999999999864




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00