Psyllid ID: psy2293
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 832 | 2.2.26 [Sep-21-2011] | |||||||
| Q9H8V3 | 914 | Protein ECT2 OS=Homo sapi | yes | N/A | 0.837 | 0.762 | 0.356 | 1e-126 | |
| Q07139 | 913 | Protein ECT2 OS=Mus muscu | yes | N/A | 0.829 | 0.755 | 0.357 | 1e-125 | |
| Q96PE2 | 2063 | Rho guanine nucleotide ex | no | N/A | 0.411 | 0.165 | 0.259 | 2e-18 | |
| Q1ZXH8 | 1632 | Guanine exchange factor f | no | N/A | 0.272 | 0.139 | 0.298 | 1e-17 | |
| Q80U35 | 2057 | Rho guanine nucleotide ex | no | N/A | 0.326 | 0.132 | 0.279 | 3e-17 | |
| Q553D3 | 1173 | Rac guanine nucleotide ex | no | N/A | 0.301 | 0.213 | 0.300 | 6e-17 | |
| Q55E26 | 1198 | Rac guanine nucleotide ex | no | N/A | 0.281 | 0.195 | 0.272 | 2e-16 | |
| Q008S8 | 904 | Epithelial cell-transform | no | N/A | 0.317 | 0.292 | 0.257 | 4e-16 | |
| Q9TW28 | 1737 | Myosin-M heavy chain OS=D | no | N/A | 0.337 | 0.161 | 0.260 | 5e-16 | |
| Q8C033 | 1345 | Rho guanine nucleotide ex | no | N/A | 0.288 | 0.178 | 0.270 | 5e-16 |
| >sp|Q9H8V3|ECT2_HUMAN Protein ECT2 OS=Homo sapiens GN=ECT2 PE=1 SV=4 | Back alignment and function desciption |
|---|
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/760 (35%), Positives = 422/760 (55%), Gaps = 63/760 (8%)
Query: 95 IIVTSEFTNNFLRFHKPPQSRILGPTALIEMSIKVENLSIPLRTRIRPLFCHSMQNIVIC 154
+ V ++F ++ R++GP ++ S K E PL RPL+C SM N+V+C
Sbjct: 127 VFVVTDFQDSVFNDLYKADCRVIGPPVVLNCSQKGE----PLPFSCRPLYCTSMMNLVLC 182
Query: 155 ITGFRNKQETMKLIDITKHMGGKLRKEMNYQVTHLIANCVSGEKYKYAMGFRVPVLTKEF 214
TGFR K+E ++L+ + HMGG +RK+ N +VTHL+ANC GEK++ A+ P++ E+
Sbjct: 183 FTGFRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEW 242
Query: 215 VLSAWEKRYDVNFKADEPSFMNQYKLKLFQGAKVNFFGFSEEDEEQLQELLLSNGGKPSL 274
+ AWE+R + +F A F N++K+ FQ ++F GFS+E++ ++E+ GGK
Sbjct: 243 IYKAWERRNEQDFYAAVDDFRNEFKVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLP 302
Query: 275 SSDEPLTTHVVVDDSKVTCMPNVPCTSTYVVKARWFWMSIQNSECADESKYLFGK----- 329
DE TH+VV+++ V +P P YVVK WFW SIQ A E+ YL+ K
Sbjct: 303 LGDE-RCTHLVVEENIVKDLPFEPSKKLYVVKQEWFWGSIQMDARAGETMYLYEKANTPE 361
Query: 330 --------NFRTPDRAAKRKRLMEVV----EEPHSSPRKSRKKRTSDIDGTPRYSCGSLL 377
+ TP+ KR+RL E + E SP RK+ +++ S GSLL
Sbjct: 362 LKKSVSMLSLNTPNSNRKRRRLKETLAQLSRETDVSPFPPRKRPSAEHS----LSIGSLL 417
Query: 378 DYTTSPDNFLATDESDV-----------MIKGNSPRHQVFKELCQTESNYVNVLRVLIEH 426
D + +P++ + ++ + S R QV KEL QTESNYVN+L +I+
Sbjct: 418 DISNTPESSINYGDTPKSCTKSSKSSTPVPSKQSARWQVAKELYQTESNYVNILATIIQL 477
Query: 427 FKNPLEEKLNTNECILNQAEMKIIFGDLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFV 486
F+ PLEE+ IL E+K IFG + IFD H + DL+ L N+ +S SIG++F+
Sbjct: 478 FQVPLEEEGQRGGPILAPEEIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDESKSIGDIFL 537
Query: 487 KHCTAFKKVYPPFINFFQDSN-SLLKEKEKNSRFLAFLKLCYMNLRDLGLPEIDKQTLPD 545
K+ K YPPF+NFF+ S +++K +++ RF AFLK+ + PE +Q+L +
Sbjct: 538 KYSKDLVKTYPPFVNFFEMSKETIIKCEKQKPRFHAFLKI------NQAKPECGRQSLVE 591
Query: 546 LLIRPVQRLGSISLLLNDILKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSL 605
LLIRPVQRL S++LLLND+ K+T+ + D L +A+ ++ VMT +NE+K++ + Q+ +
Sbjct: 592 LLIRPVQRLPSVALLLNDLKKHTADENPDKSTLEKAIGSLKEVMTHINEDKRKTEAQKQI 651
Query: 606 FDIYQDIENCPPQLINSHRSFVLKCDVIELSNMLSHRGDCITLFLFTDVVEVCKKRSKYV 665
FD+ +++ CP L++SHRS V + + I L RG+ +TLFLF D +E+ +KR K +
Sbjct: 652 FDVVYEVDGCPANLLSSHRSLVQRVETISLGEHPCDRGEQVTLFLFNDCLEIARKRHKVI 711
Query: 666 NVLKSPNTSKMSLSTYKTQAKHPIDKTYKHIKLLSMTSIKKVYNVEDEAHDNDRQIFALR 725
+SP+ Q + P + KHI L+ ++ IKKV ++ + ++ FAL
Sbjct: 712 GTFRSPH----------GQTRPP--ASLKHIHLMPLSQIKKVLDIRET--EDCHNAFALL 757
Query: 726 CRGSDEVIETTYSFNIIDDTLDKMSFLRELCRQASAVYCINFDKFLEDISLANASSFNIE 785
R E SF + D L K ++L+ LCR + C + L I A+ SF +
Sbjct: 758 VRPPTEQANVLLSFQMTSDELPKENWLKMLCRHVANTICKADAENL--IYTADPESFEVN 815
Query: 786 TH--ESSNSTLGRAIKFASKQVGRTLSLNRTPS-TLRKVM 822
T +S+ S RAIK SK+V R S ++TP LR+ +
Sbjct: 816 TKDMDSTLSRASRAIKKTSKKVTRAFSFSKTPKRALRRAL 855
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Guanine nucleotide exchange factor (GEF) that catalyzes the exchange of GDP for GTP. Promotes guanine nucleotide exchange on the Rho family members of small GTPases, like RHOA, RHOC, RAC1 and CDC42. Required for signal transduction pathways involved in the regulation of cytokinesis. Component of the centralspindlin complex that serves as a microtubule-dependent and Rho-mediated signaling required for the myosin contractile ring formation during the cell cycle cytokinesis. Regulates the translocation of RHOA from the central spindle to the equatorial region. Plays a role in the control of mitotic spindle assembly; regulates the activation of CDC42 in metaphase for the process of spindle fibers attachment to kinetochores before chromosome congression. Involved in the regulation of epithelial cell polarity; participates in the formation of epithelial tight junctions in a polarity complex PARD3-PARD6-protein kinase PRKCQ-dependent manner. Plays a role in the regulation of neurite outgrowth. Inhibits phenobarbital (PB)-induced NR1I3 nuclear translocation. Stimulates the activity of RAC1 through its association with the oncogenic PARD6A-PRKCI complex in cancer cells, thereby acting to coordinately drive tumor cell proliferation and invasion. Also stimulates genotoxic stress-induced RHOB activity in breast cancer cells leading to their cell death. Homo sapiens (taxid: 9606) |
| >sp|Q07139|ECT2_MOUSE Protein ECT2 OS=Mus musculus GN=Ect2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q96PE2|ARHGH_HUMAN Rho guanine nucleotide exchange factor 17 OS=Homo sapiens GN=ARHGEF17 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q1ZXH8|GXCDD_DICDI Guanine exchange factor for Rac 30 OS=Dictyostelium discoideum GN=gxcDD PE=4 SV=3 | Back alignment and function description |
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| >sp|Q80U35|ARHGH_MOUSE Rho guanine nucleotide exchange factor 17 OS=Mus musculus GN=Arhgef17 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q553D3|GXCJJ_DICDI Rac guanine nucleotide exchange factor JJ OS=Dictyostelium discoideum GN=gxcJJ PE=1 SV=1 | Back alignment and function description |
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| >sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS=Dictyostelium discoideum GN=gxcB PE=2 SV=1 | Back alignment and function description |
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| >sp|Q008S8|ECT2L_HUMAN Epithelial cell-transforming sequence 2 oncogene-like OS=Homo sapiens GN=ECT2L PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9TW28|MYOM_DICDI Myosin-M heavy chain OS=Dictyostelium discoideum GN=myoM PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8C033|ARHGA_MOUSE Rho guanine nucleotide exchange factor 10 OS=Mus musculus GN=Arhgef10 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 832 | ||||||
| 340727322 | 899 | PREDICTED: protein ECT2-like [Bombus ter | 0.888 | 0.822 | 0.422 | 1e-170 | |
| 383864139 | 899 | PREDICTED: protein ECT2-like [Megachile | 0.888 | 0.822 | 0.418 | 1e-170 | |
| 328790834 | 898 | PREDICTED: LOW QUALITY PROTEIN: protein | 0.888 | 0.822 | 0.420 | 1e-169 | |
| 307196334 | 837 | Protein ECT2 [Harpegnathos saltator] | 0.883 | 0.878 | 0.411 | 1e-157 | |
| 242005564 | 808 | ECT2 protein, putative [Pediculus humanu | 0.894 | 0.920 | 0.396 | 1e-154 | |
| 322795799 | 868 | hypothetical protein SINV_12193 [Solenop | 0.891 | 0.854 | 0.396 | 1e-153 | |
| 307187372 | 870 | Protein ECT2 [Camponotus floridanus] | 0.887 | 0.848 | 0.398 | 1e-152 | |
| 321464618 | 899 | hypothetical protein DAPPUDRAFT_306724 [ | 0.929 | 0.859 | 0.377 | 1e-147 | |
| 328705122 | 900 | PREDICTED: protein ECT2-like isoform 2 [ | 0.829 | 0.766 | 0.383 | 1e-139 | |
| 61675645 | 853 | SD01796p [Drosophila melanogaster] | 0.884 | 0.862 | 0.365 | 1e-136 |
| >gi|340727322|ref|XP_003401995.1| PREDICTED: protein ECT2-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 347/822 (42%), Positives = 495/822 (60%), Gaps = 83/822 (10%)
Query: 52 QICVCSNVDQTETFKKALASFNVPVVL-------VEDPDY---FVHAKFDGPIIIVTSEF 101
+IC+ A F+VPV+ VED Y F+ KF+GP
Sbjct: 31 RICLIGAAGDDPALGAAAQQFSVPVLKSETGLEHVEDTSYCTYFILKKFEGP-------- 82
Query: 102 TNNFLRFHKPPQSRILGPTALIEMSIKVENLSIPLRTRIRPLFCHSMQNIVICITGFRNK 161
+ HK RILGPTAL++++ K + S+P TR P++ +M V+ TGFR K
Sbjct: 83 --EYDALHKSAH-RILGPTALLQLAEKKD--SLPSITR--PMYTQAMVGTVVVFTGFRKK 135
Query: 162 QETMKLIDITKHMGGKLRKEMNYQVTHLIANCVSGEKYKYAMGFRVPVLTKEFVLSAWEK 221
E KLI++ +MGG +RKEM +VTHLIANC G+KY+YA+ FRVP+++ E+V + W
Sbjct: 136 DELTKLINMIHNMGGSIRKEMGAKVTHLIANCCGGDKYRYAVTFRVPIMSMEWVTALWNA 195
Query: 222 RYDVNFKADEPSFMNQYKLKLFQGAKVNFFGFSEEDEEQLQELLLSNGGKPSLSSDEPLT 281
+ D++ + + YKLK F GAKV FFGF +E++ + E+L GG+ S D+P
Sbjct: 196 KDDISSYGNNEELITTYKLKPFFGAKVCFFGFPDEEKRHMCEVLQQQGGE-STEIDDPNC 254
Query: 282 THVVVDDSKVTCMPNVPCTSTYVVKARWFWMSIQNSECADESKYLF-------------- 327
THVVVD+S V +P++ ++VKA WFW S+QN ADE +YLF
Sbjct: 255 THVVVDESNVNALPDLASVRAHIVKAEWFWTSVQNEGAADEKEYLFEDYLESVLSPTVSV 314
Query: 328 ---GKNFRTPDRAA---KRKRLME----VVEEPHSSPRKSRKKRTSDIDGTPRYSCGSLL 377
+ TP A+ KRKRL E +V+ SP K+R+S D GS L
Sbjct: 315 RRDSQQAATPSTASTRRKRKRLAETLSSLVQNGADSP-ALHKRRSSISDAGHLSVSGSFL 373
Query: 378 DYTTSPDNFLATD-------ESDVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNP 430
D TTSPD L D +D K SPRHQVF EL QTESNYV +L ++ FK+P
Sbjct: 374 DCTTSPDKPLLDDIPEVEAVNTDTSRKNLSPRHQVFLELVQTESNYVGILSTIMTLFKSP 433
Query: 431 LEEKLNTNECILNQAEMKIIFGDLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFVKHCT 490
LE+ ++T +LN E KIIFG+ PI++ HK +L++L+Y ++ + SIG +F+K
Sbjct: 434 LEDLIDTTGELLNCTEAKIIFGNFPPIYEVHKKMLEELRYSTTHWMEDNSIGNIFLKFAP 493
Query: 491 AFKKVYPPFINFFQDSNSLLKEKEKNS-RFLAFLKLCYMNLRDLGLPEIDKQTLPDLLIR 549
K YPP++NFF+++ +L + ++N RF AFLK+C PE +Q+L +LLI+
Sbjct: 494 DLVKAYPPYVNFFENTKEMLDQCDQNKPRFHAFLKVCQTK------PECGRQSLKELLIK 547
Query: 550 PVQRLGSISLLLNDILKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIY 609
PVQRL SISLLLNDILK+T+K++ DH L ++ I+ VMT++NE+K++ + Q +FDI+
Sbjct: 548 PVQRLPSISLLLNDILKHTNKNNPDHSALELSISSIKEVMTYINEDKRKTEGQLVMFDIF 607
Query: 610 QDIENCPPQLINSHRSFVLKCDVIELSNMLSHRGDCITLFLFTDVVEVCKKRSKYVNVLK 669
+I+NCPP L++SHRSF+ KCDV+EL LS RGD + LFLFTD +E+CKKRSK N LK
Sbjct: 608 NEIDNCPPHLVSSHRSFIGKCDVMELGEGLSGRGDHLVLFLFTDTLEICKKRSKAFNSLK 667
Query: 670 SPNTSKMSLSTYKTQAKHPIDKTYKHIKLLSMTSIKKVYNVE--DEAHDNDRQIFALRCR 727
SPNT+ +T +Q K YKHIK+LS+++IKKV ++ DE H ++FAL R
Sbjct: 668 SPNTANGLHTTKLSQG-----KPYKHIKMLSLSTIKKVVDIRETDECH----KVFALMVR 718
Query: 728 GSDEVIETTYSFNIIDDTLDKMSFLRELCRQASAVYC-INFDKFLEDISLANASSFNIET 786
+ E+ E +SF I D+ ++K ++LR LCRQ + C + D FL ISL ++ I+T
Sbjct: 719 SNQELKEKLFSFTITDEEVNKTNYLRTLCRQMANTVCKADADTFL--ISL-DSHQLEIDT 775
Query: 787 HESSNSTLGRAIKFASK---QVGRTLSLNRTPSTLRKVMSSM 825
+ + TL +A KFAS+ +VGR S N+TPS L++ MS+M
Sbjct: 776 SDVALGTLSKAFKFASRTRMKVGRAFSFNKTPSKLKRAMSTM 817
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Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383864139|ref|XP_003707537.1| PREDICTED: protein ECT2-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|328790834|ref|XP_396514.4| PREDICTED: LOW QUALITY PROTEIN: protein ECT2 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307196334|gb|EFN77944.1| Protein ECT2 [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|242005564|ref|XP_002423634.1| ECT2 protein, putative [Pediculus humanus corporis] gi|212506794|gb|EEB10896.1| ECT2 protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|322795799|gb|EFZ18478.1| hypothetical protein SINV_12193 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|307187372|gb|EFN72495.1| Protein ECT2 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|321464618|gb|EFX75625.1| hypothetical protein DAPPUDRAFT_306724 [Daphnia pulex] | Back alignment and taxonomy information |
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| >gi|328705122|ref|XP_003242704.1| PREDICTED: protein ECT2-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|61675645|gb|AAX51638.1| SD01796p [Drosophila melanogaster] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 832 | ||||||
| FB|FBgn0003041 | 1311 | pbl "pebble" [Drosophila melan | 0.490 | 0.311 | 0.392 | 2e-122 | |
| UNIPROTKB|J9NX43 | 942 | ECT2 "Uncharacterized protein" | 0.574 | 0.507 | 0.347 | 6.7e-119 | |
| UNIPROTKB|G5E9L8 | 927 | ECT2 "Protein ECT2" [Homo sapi | 0.566 | 0.508 | 0.354 | 9.7e-118 | |
| UNIPROTKB|Q9H8V3 | 914 | ECT2 "Protein ECT2" [Homo sapi | 0.566 | 0.515 | 0.354 | 4.7e-116 | |
| UNIPROTKB|F1MJ58 | 914 | LOC100849441 "Uncharacterized | 0.566 | 0.515 | 0.358 | 6e-116 | |
| MGI|MGI:95281 | 913 | Ect2 "ect2 oncogene" [Mus musc | 0.564 | 0.514 | 0.349 | 2.6e-115 | |
| UNIPROTKB|F1PT21 | 918 | ECT2 "Uncharacterized protein" | 0.576 | 0.522 | 0.346 | 1.8e-114 | |
| UNIPROTKB|E1BWT7 | 914 | ECT2 "Uncharacterized protein" | 0.586 | 0.533 | 0.339 | 7.9e-112 | |
| ZFIN|ZDB-GENE-040831-2 | 976 | ect2 "epithelial cell transfor | 0.831 | 0.709 | 0.353 | 1.3e-107 | |
| RGD|1308524 | 692 | Ect2 "epithelial cell transfor | 0.383 | 0.460 | 0.376 | 1.2e-101 |
| FB|FBgn0003041 pbl "pebble" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 744 (267.0 bits), Expect = 2.0e-122, Sum P(3) = 2.0e-122
Identities = 181/461 (39%), Positives = 262/461 (56%)
Query: 277 DEPLTTHVVVDDSKVTCMPNVPCTSTYVVKARWFWMSIQNSECADESKYLFGKNF----R 332
+EP+ +VVD+ P T+++K+ WFW +IQN A+E YLFG
Sbjct: 702 EEPMA--MVVDEHTTLTKPEPKNNHTHILKSDWFWYTIQNGY-ANEMDYLFGDYLDSITN 758
Query: 333 TP--DRA---------AKRKRLMEVVE-EPHXXXXXXXXXXTSDIDGTPRYSCGSLLDYT 380
TP DR KRKR + ++ E SD G S SL D T
Sbjct: 759 TPNTDRRDSLPISFNKRKRKRFSQRIQLEGTPLGSGKRRSSVSDA-GLLSVS-NSLFDCT 816
Query: 381 TSPDNFLATDE--------SDVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNPLE 432
TSPD L +D+ SD S R F + TESNYV +L ++ FKN LE
Sbjct: 817 TSPDK-LESDKLLHAEPEASDATPAKKSMRFNHFMDFYTTESNYVGILDTILNLFKNKLE 875
Query: 433 EKLNTNECILNQAEMKIIFGDLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFVKHCTAF 492
E TN+ +LN++E+K IFG+ PI + H+ +L+ L+ L N+ + IG++ ++H
Sbjct: 876 ELAETNDPLLNKSEIKTIFGNFLPIHEVHQSMLEHLRKLHANWREDCLIGDIIIQHRDEL 935
Query: 493 KKVYPPFINFFQDSNSLLKEKEKN-SRFLAFLKLCYMNLRDLGLPEIDKQTLPDLLIRPV 551
K YPP++NFF+ L+ ++ RF AFLK+ PE +Q L DL+IRPV
Sbjct: 936 IKAYPPYVNFFEQMKEQLQYCDREYPRFHAFLKINQTK------PECGRQGLQDLMIRPV 989
Query: 552 QRLGSISLLLNDILKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIYQD 611
QRL SISLLLNDILK+T+ + DH +L EAL I+ V +NE+K+R +++ ++FDI+ D
Sbjct: 990 QRLPSISLLLNDILKHTTSGNADHGRLEEALKAIKQVTLHINEDKRRTESRMAIFDIFND 1049
Query: 612 IENCPPQLINSHRSFVLKCDVIELSNMLSHRGDCITLFLFTDVVEVCKKRSKYVNVLKSP 671
IE CP L++S+RSF+LKC+V ELS+ LS RGD + L+LF+D +E+CK+RSK N KSP
Sbjct: 1050 IEGCPAHLVSSNRSFILKCEVNELSDSLSGRGDSLVLYLFSDSIELCKRRSKGFNTAKSP 1109
Query: 672 NTSKMSLSTYKTQAKHPIDKTYKHIKLLSMTSIKKVYNVED 712
+T+K T+KH+KL+S+ +I+ V ++ D
Sbjct: 1110 STAK----------------THKHLKLISLNTIRLVIDISD 1134
|
|
| UNIPROTKB|J9NX43 ECT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E9L8 ECT2 "Protein ECT2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9H8V3 ECT2 "Protein ECT2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MJ58 LOC100849441 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| MGI|MGI:95281 Ect2 "ect2 oncogene" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PT21 ECT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BWT7 ECT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040831-2 ect2 "epithelial cell transforming sequence 2 oncogene" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| RGD|1308524 Ect2 "epithelial cell transforming sequence 2 oncogene" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q07139 | ECT2_MOUSE | No assigned EC number | 0.3577 | 0.8293 | 0.7557 | yes | N/A |
| Q9H8V3 | ECT2_HUMAN | No assigned EC number | 0.3565 | 0.8377 | 0.7625 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 832 | |||
| cd01229 | 180 | cd01229, PH_Ect2, Epithelial cell transforming 2 ( | 4e-48 | |
| pfam00621 | 179 | pfam00621, RhoGEF, RhoGEF domain | 8e-46 | |
| smart00325 | 180 | smart00325, RhoGEF, Guanine nucleotide exchange fa | 1e-37 | |
| cd00160 | 181 | cd00160, RhoGEF, Guanine nucleotide exchange facto | 6e-35 | |
| pfam12738 | 63 | pfam12738, PTCB-BRCT, twin BRCT domain | 1e-12 | |
| cd00027 | 72 | cd00027, BRCT, Breast Cancer Suppressor Protein (B | 8e-08 | |
| smart00292 | 78 | smart00292, BRCT, breast cancer carboxy-terminal d | 4e-07 | |
| pfam00533 | 77 | pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain | 3e-06 | |
| COG5422 | 1175 | COG5422, ROM1, RhoGEF, Guanine nucleotide exchange | 1e-04 | |
| smart00292 | 78 | smart00292, BRCT, breast cancer carboxy-terminal d | 0.001 | |
| pfam00533 | 77 | pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain | 0.001 |
| >gnl|CDD|241263 cd01229, PH_Ect2, Epithelial cell transforming 2 (Ect2) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 4e-48
Identities = 74/182 (40%), Positives = 114/182 (62%), Gaps = 12/182 (6%)
Query: 585 IRTVMTFLNENKQRQDNQRSLFDIYQDIENCPPQLINSHRSFVLKCDVIELS-NMLSHRG 643
++ VMT +NE+K++ + Q +FDI +IE CPP L++SHRSFV + +V+EL ++ S RG
Sbjct: 1 LKEVMTHINEDKRKTEGQAQMFDIVNEIEGCPPTLLSSHRSFVSRLEVVELGDSLKSGRG 60
Query: 644 DCITLFLFTDVVEVCKKRSKYVNVLKSPNTSKMSLSTYKTQAKHPID-KTYKHIKLLSMT 702
D + LFLF+D++E+CKKRS KSP S T + K YKHIKL+ ++
Sbjct: 61 DSLALFLFSDLLEICKKRSSVKGTAKSPRGS--------TGSGLRESKKKYKHIKLMPLS 112
Query: 703 SIKKVYNVEDEAHDNDRQIFALRCRGSDEVIETTYSFNIIDDTLDKMSFLRELCRQASAV 762
+IK+V ++ + ++ + +FAL R E+ E YSF I+D+ DK FL+ LC+Q +
Sbjct: 113 NIKRVIDITE--TEDCQNVFALLFRSPTELKEKLYSFQILDEETDKEKFLKTLCKQIANT 170
Query: 763 YC 764
C
Sbjct: 171 VC 172
|
Ect2, a mammalian ortholog of Drosophila pebble, plays a role in neuronal differentiation and brain development. Pebble and Ect2 have been identified as Rho-family guanine nucleotide exchange factors (GEF) that mediate activation of Rho during cytokinesis, but are proposed to play slightly different roles. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 180 |
| >gnl|CDD|216028 pfam00621, RhoGEF, RhoGEF domain | Back alignment and domain information |
|---|
| >gnl|CDD|214619 smart00325, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases | Back alignment and domain information |
|---|
| >gnl|CDD|238091 cd00160, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|193214 pfam12738, PTCB-BRCT, twin BRCT domain | Back alignment and domain information |
|---|
| >gnl|CDD|237994 cd00027, BRCT, Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|214602 smart00292, BRCT, breast cancer carboxy-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|215978 pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain | Back alignment and domain information |
|---|
| >gnl|CDD|227709 COG5422, ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|214602 smart00292, BRCT, breast cancer carboxy-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|215978 pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 832 | |||
| KOG3524|consensus | 850 | 100.0 | ||
| KOG3523|consensus | 695 | 100.0 | ||
| KOG4424|consensus | 623 | 100.0 | ||
| KOG4305|consensus | 1029 | 100.0 | ||
| KOG3520|consensus | 1167 | 100.0 | ||
| KOG2996|consensus | 865 | 100.0 | ||
| KOG3521|consensus | 846 | 100.0 | ||
| KOG3518|consensus | 521 | 100.0 | ||
| COG5422 | 1175 | ROM1 RhoGEF, Guanine nucleotide exchange factor fo | 100.0 | |
| smart00325 | 180 | RhoGEF Guanine nucleotide exchange factor for Rho/ | 99.97 | |
| cd00160 | 181 | RhoGEF Guanine nucleotide exchange factor for Rho/ | 99.97 | |
| PF00621 | 180 | RhoGEF: RhoGEF domain; InterPro: IPR000219 The Rho | 99.96 | |
| KOG2070|consensus | 661 | 99.94 | ||
| KOG3522|consensus | 925 | 99.94 | ||
| KOG0689|consensus | 448 | 99.91 | ||
| KOG4240|consensus | 1025 | 99.9 | ||
| KOG3531|consensus | 1036 | 99.88 | ||
| KOG3519|consensus | 756 | 99.87 | ||
| KOG1929|consensus | 811 | 99.87 | ||
| cd01229 | 129 | PH_etc2 Epithelial cell transforming 2 (ECT2) plec | 99.84 | |
| KOG3524|consensus | 850 | 99.78 | ||
| KOG1929|consensus | 811 | 99.64 | ||
| PF12738 | 63 | PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2W | 99.57 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 99.54 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 99.48 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 99.47 | |
| cd01221 | 125 | PH_ephexin Ephexin Pleckstrin homology (PH) domain | 99.44 | |
| PF00533 | 78 | BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IP | 99.33 | |
| PF00533 | 78 | BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IP | 99.32 | |
| PF12738 | 63 | PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2W | 99.31 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 99.27 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 99.26 | |
| cd01224 | 109 | PH_Collybistin Collybistin pleckstrin homology (PH | 99.25 | |
| cd01226 | 100 | PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin | 99.24 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 99.23 | |
| cd00027 | 72 | BRCT Breast Cancer Suppressor Protein (BRCA1), car | 99.18 | |
| cd01227 | 133 | PH_Dbs Dbs (DBL's big sister) pleckstrin homology | 99.16 | |
| KOG4269|consensus | 1112 | 99.14 | ||
| cd01228 | 96 | PH_BCR-related BCR (breakpoint cluster region)-rel | 99.13 | |
| smart00292 | 80 | BRCT breast cancer carboxy-terminal domain. | 99.11 | |
| smart00292 | 80 | BRCT breast cancer carboxy-terminal domain. | 99.1 | |
| cd00027 | 72 | BRCT Breast Cancer Suppressor Protein (BRCA1), car | 99.03 | |
| KOG3226|consensus | 508 | 98.98 | ||
| cd01223 | 116 | PH_Vav Vav pleckstrin homology (PH) domain. Vav pl | 98.73 | |
| KOG0966|consensus | 881 | 98.67 | ||
| KOG3226|consensus | 508 | 98.45 | ||
| KOG0931|consensus | 627 | 98.38 | ||
| KOG3548|consensus | 1176 | 98.35 | ||
| KOG4362|consensus | 684 | 98.2 | ||
| PLN03122 | 815 | Poly [ADP-ribose] polymerase; Provisional | 98.16 | |
| cd01225 | 111 | PH_Cool_Pix Cool (cloned out of library)/Pix (PAK- | 97.98 | |
| PF15405 | 135 | PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A. | 97.96 | |
| PLN03122 | 815 | Poly [ADP-ribose] polymerase; Provisional | 97.94 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 97.91 | |
| PLN03123 | 981 | poly [ADP-ribose] polymerase; Provisional | 97.83 | |
| KOG2043|consensus | 896 | 97.79 | ||
| PLN03123 | 981 | poly [ADP-ribose] polymerase; Provisional | 97.78 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 97.72 | |
| PRK06063 | 313 | DNA polymerase III subunit epsilon; Provisional | 97.67 | |
| PRK06195 | 309 | DNA polymerase III subunit epsilon; Validated | 97.59 | |
| PRK14350 | 669 | ligA NAD-dependent DNA ligase LigA; Provisional | 97.57 | |
| PRK14351 | 689 | ligA NAD-dependent DNA ligase LigA; Provisional | 97.5 | |
| PRK07956 | 665 | ligA NAD-dependent DNA ligase LigA; Validated | 97.49 | |
| PF15411 | 116 | PH_10: Pleckstrin homology domain | 97.35 | |
| KOG3548|consensus | 1176 | 97.33 | ||
| TIGR00575 | 652 | dnlj DNA ligase, NAD-dependent. The member of this | 97.31 | |
| COG0272 | 667 | Lig NAD-dependent DNA ligase (contains BRCT domain | 97.27 | |
| PRK14350 | 669 | ligA NAD-dependent DNA ligase LigA; Provisional | 97.04 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 97.04 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 96.94 | |
| KOG2481|consensus | 570 | 96.9 | ||
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 96.89 | |
| KOG0930|consensus | 395 | 96.76 | ||
| PRK06195 | 309 | DNA polymerase III subunit epsilon; Validated | 96.72 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 96.68 | |
| PRK07956 | 665 | ligA NAD-dependent DNA ligase LigA; Validated | 96.68 | |
| PRK06063 | 313 | DNA polymerase III subunit epsilon; Provisional | 96.64 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 96.62 | |
| COG5275 | 276 | BRCT domain type II [General function prediction o | 96.61 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 96.55 | |
| PRK14351 | 689 | ligA NAD-dependent DNA ligase LigA; Provisional | 96.52 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 96.52 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 96.38 | |
| TIGR00575 | 652 | dnlj DNA ligase, NAD-dependent. The member of this | 96.35 | |
| KOG2043|consensus | 896 | 96.34 | ||
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 96.12 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 96.1 | |
| COG5163 | 591 | NOP7 Protein required for biogenesis of the 60S ri | 96.0 | |
| KOG0966|consensus | 881 | 95.95 | ||
| KOG0323|consensus | 635 | 95.9 | ||
| KOG3522|consensus | 925 | 95.89 | ||
| COG0272 | 667 | Lig NAD-dependent DNA ligase (contains BRCT domain | 95.84 | |
| cd01255 | 160 | PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM | 95.8 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 95.74 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 95.7 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 95.66 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 95.62 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 95.47 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 95.21 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 95.02 | |
| KOG1729|consensus | 288 | 94.97 | ||
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 94.67 | |
| KOG2481|consensus | 570 | 94.35 | ||
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 94.24 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 94.12 | |
| cd01263 | 122 | PH_anillin Anillin Pleckstrin homology (PH) domain | 93.72 | |
| KOG4362|consensus | 684 | 93.38 | ||
| KOG0323|consensus | 635 | 93.3 | ||
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 92.78 | |
| COG5163 | 591 | NOP7 Protein required for biogenesis of the 60S ri | 92.64 | |
| COG5275 | 276 | BRCT domain type II [General function prediction o | 92.5 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 92.15 | |
| KOG2093|consensus | 1016 | 90.88 | ||
| cd01230 | 117 | PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 | 90.04 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 88.54 | |
| PF14593 | 104 | PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A. | 88.38 | |
| KOG2059|consensus | 800 | 88.33 | ||
| KOG0521|consensus | 785 | 87.26 | ||
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 85.52 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 83.98 | |
| PRK05601 | 377 | DNA polymerase III subunit epsilon; Validated | 81.19 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 80.75 | |
| cd01243 | 122 | PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin | 80.43 |
| >KOG3524|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-88 Score=732.43 Aligned_cols=730 Identities=31% Similarity=0.476 Sum_probs=611.2
Q ss_pred CCCCCCceeEEEeecccCcHHHHHHHhhCC-CceEeecCC-----------ceEEecCCCCCcccccccccccchhhhCC
Q psy2293 44 DTEPGMPCQICVCSNVDQTETFKKALASFN-VPVVLVEDP-----------DYFVHAKFDGPIIIVTSEFTNNFLRFHKP 111 (832)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~v~~~f~g~~i~~~~~~~~~f~~~~~~ 111 (832)
-.+.....++|+|++..++.++.+.-++.+ ++++..+.. ..++..+|++-- |...++.
T Consensus 14 ~~i~sl~~~~~~v~~~~~~~~~le~q~e~~~i~i~q~dt~~dL~ge~sd~~~f~v~~d~~~~~----------~~~~h~e 83 (850)
T KOG3524|consen 14 KTIQKLAVSKKDVHDFKDIFEMLEEQKEKRNINIIQYDSLDDLSGDWSDYTFFCVNFDSDLFR----------TLTKHQE 83 (850)
T ss_pred hhhhhccccceeccchhHHHHhhhhhhhccceeccccchHhHhhhhhhhceeeeeecchhhhh----------hhhcccc
Confidence 356667779999999888888888777777 677765321 155666665544 4444443
Q ss_pred -CCCeEeCHHHHHHHHHhccccccCCCCCCCCccccCCCceEEEEcCCCChHhHHHHHHHHHhcCCEEEeecCcceeEEE
Q psy2293 112 -PQSRILGPTALIEMSIKVENLSIPLRTRIRPLFCHSMQNIVICITGFRNKQETMKLIDITKHMGGKLRKEMNYQVTHLI 190 (832)
Q Consensus 112 -~~~~i~gp~~v~~~~~~~~~~~~~lp~~~~P~~~~~~~g~~i~~tg~~~~~~~~~l~~~v~~~GG~~~~~l~~~~THLI 190 (832)
..+-|+|-..|..-+-+++. ...-+..+|+||+.|+|++.||||+.++++ +++++|+.|||.++++++.++||+|
T Consensus 84 ~E~~~~~~~~~~~~k~~~ae~--~~tl~~srply~~~m~~vvlcfTg~rkk~e--~lv~lvh~mgg~irkd~nsktthli 159 (850)
T KOG3524|consen 84 TEALFIIGASVLKNKLLKAED--LMTLRAARPLYCELMKDVVMCFTGERKKKE--ELVDLVHYMGGSIRKDTNSKTTHLI 159 (850)
T ss_pred ceeeccccHHHHHHHHHHHHh--hhccccCCcccchhhcCceeeeeccchhhH--HHHHHHHHhcceeEeeeccCceEEE
Confidence 12334444444444433331 133347899999999999999999997664 9999999999999999999999999
Q ss_pred eccCCChhhHHHhhcCCCeeeHHHHHHHHHcCCcCCCCCCChhhhhhhhhcccccceEEecCCChhhHHHHHHHHHhCCC
Q psy2293 191 ANCVSGEKYKYAMGFRVPVLTKEFVLSAWEKRYDVNFKADEPSFMNQYKLKLFQGAKVNFFGFSEEDEEQLQELLLSNGG 270 (832)
Q Consensus 191 a~~~~~~Ky~~A~~~~i~IV~~~Wv~dc~~~~~~~~~~~~~~~~~~~~~~~~F~g~~i~~~g~~~~e~~~l~~li~~~GG 270 (832)
|+..+++||..|... .|+|.|.||..||..+....+.++.+.|.+.|++++|+|+.|+|.||..++...|.+..+..||
T Consensus 160 ~n~s~gek~~~a~t~-~~~~rp~wv~~aw~~rn~~yfda~~~~f~d~hrl~~feg~~~~f~gF~~ee~~~m~~sle~~gg 238 (850)
T KOG3524|consen 160 ANKVEGEKQSIALVG-VPTMRPDWVTEAWKHRNDSYFDAMEPCFVDKHRLGVFEGLSLFFHGFKQEEIDDMLRSLENTGG 238 (850)
T ss_pred eecccceEEEEEeec-cceechHhhhhhhcCcchhhhhhhccchhhhhccccccCCeEeecCCcHHHHHHHHHHHHhcCC
Confidence 999999999999987 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCCceEEEEeCCCCcccccccCCCCeEeechhHHHhHhcCccccccccccCCCC-----------CCCchhhh
Q psy2293 271 KPSLSSDEPLTTHVVVDDSKVTCMPNVPCTSTYVVKARWFWMSIQNSECADESKYLFGKNF-----------RTPDRAAK 339 (832)
Q Consensus 271 ~~~~~~~~~~~THlI~~~~~~~k~~~a~~~~i~iV~~~Wl~~si~~g~~~~E~~Y~~~~~~-----------~~p~~~~~ 339 (832)
++. . .+..|||||+++.+.+-.+.+.+.+.++|..+|||-+|++|.|+.|.+|++..+. .+|.+.++
T Consensus 239 ~~a-~-~d~~cthvvv~e~~~~~~p~~~s~~~~~vk~ewfw~siq~g~~a~e~~yl~~~~~~~~~p~~~~~~s~pis~~k 316 (850)
T KOG3524|consen 239 KLA-P-SDTLCTHVVVNEDNDEVEPLAVSSNQVHVKKEWFWVSIQRGCCAIEDNYLLPTGKLHRKPLESSSVSSPISKSK 316 (850)
T ss_pred ccc-C-CCCCceeEeecCCccccccccccccceeecccceEEEEecchhccccceeccccceeccccccCcccccchhhh
Confidence 999 4 8899999999999999999999999999999999999999999999999987752 15666666
Q ss_pred hhhhhhhc-ccCCCCCCCCCCCcccccCCCC------ccCCCCccccCCCCCCCC-CcccccccCCCchhHHHHHHHHHH
Q psy2293 340 RKRLMEVV-EEPHSSPRKSRKKRTSDIDGTP------RYSCGSLLDYTTSPDNFL-ATDESDVMIKGNSPRHQVFKELCQ 411 (832)
Q Consensus 340 ~~rLsq~~-~~~~~~p~~~~~~r~S~~~~~~------~~s~~s~~d~s~s~~~~~-~~~~~~~~~~~~~kRq~vi~ELl~ 411 (832)
|+|.+.+. ...+.++.++..+|.+. .+. +.|.+|..|.+.+|.... ..+...+.+++.+-|-.+..++..
T Consensus 317 r~r~~~S~~~~r~~t~~g~~~~R~t~--~~i~s~~d~~~sc~Ss~~~s~t~k~~~~~~etsk~~psk~s~r~~~~~~~y~ 394 (850)
T KOG3524|consen 317 RSRNSRSLSSMRDCTVEGPTSLRMTP--DYIYSNDDVENSCKSSRQPSKRLKVCMEMVETSKNYPSKLSLRVKFKEALYC 394 (850)
T ss_pred hhcCchhHHHHhcCcccCCCCcccCC--cccccccccccCcCCcCCcccCcHHHHhccCCCcccchhhcccccchHHHHH
Confidence 66665533 12235666666666653 221 223344444443333221 122255667788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHhHHH
Q psy2293 412 TESNYVNVLRVLIEHFKNPLEEKLNTNECILNQAEMKIIFGDLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFVKHCTA 491 (832)
Q Consensus 412 TE~~Yv~~L~~l~~~f~~~L~~~~~~~~~~l~~~~~~~IF~ni~~I~~~h~~fl~~L~~~~~~~~~~~~Ig~vfl~~~~~ 491 (832)
||.+|+..|..+.+.|..+|+.......+++.+.+++.+|+|+++|..+|..+...|....+.|.+.. +.
T Consensus 395 tesnyv~il~Ti~~lf~~kleei~e~~~pil~~~eiktifgn~l~I~~vh~k~~D~l~~l~~nw~e~k----------~e 464 (850)
T KOG3524|consen 395 TESNYVFILRTIVALFFGKLEEILELHEPILARLEIKTIFGNTLLIVVVHKKNDDKLLDLAQNWIEAK----------EE 464 (850)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhCCcccCchhhcccccCchhhhhhhccchHHHHHHHHhhHHHH----------HH
Confidence 99999999999999999999998888899999999999999999999999999999999988886644 55
Q ss_pred HhhhhhHHHhhHHHHHHHHHHHHhc-hHHHHHHHHHHhccccCCCCCcCCCChhHHhhhHHHHHhhHHHHHHHHHhhCCC
Q psy2293 492 FKKVYPPFINFFQDSNSLLKEKEKN-SRFLAFLKLCYMNLRDLGLPEIDKQTLPDLLIRPVQRLGSISLLLNDILKNTSK 570 (832)
Q Consensus 492 f~~~Y~~Y~~n~~~a~~~l~~~~~~-~~F~~fl~~~~~~~~~~~~~~~~~l~L~slLi~PvQRi~rY~LLL~~llk~t~~ 570 (832)
+.+.|..|++.|+...+.+..|... |+|++|++..++ .|+|+++.|.+++++|+||++...|||++|.| ..
T Consensus 465 l~kayppyvnffet~ke~~~~cdre~prfhaflKinq~------kpecgRq~l~dlmirpvqrlpsvilllndl~k--~s 536 (850)
T KOG3524|consen 465 LKKAYPPYVNFFETIKELFDKCDRENPRFHAFLKINQS------KPECGRQKLTDLMIRPVQRLPSVILLLNDMAK--KS 536 (850)
T ss_pred HHHhccchhhHHHHhHHHHHHHhccchHHHHHHHcccc------chhhhhhcccchhccchhhhhHHHHHHHHHHh--hc
Confidence 6689999999999999999999888 999999999999 99999999999999999999999999999999 45
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCccccCCCeEEeeeeEE-EecccccCCccEEEEE
Q psy2293 571 SSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIYQDIENCPPQLINSHRSFVLKCDVI-ELSNMLSHRGDCITLF 649 (832)
Q Consensus 571 ~~~d~~~L~~A~~~i~~l~~~iNe~~~~~E~~~~l~~l~~~i~~~~~~L~~~~R~li~~g~l~-~~~~~~~~k~~~~~lf 649 (832)
+++|+..+++|...++++..+||+.++++|++..++++...|+|||..|++.+|-|+.+.++. .++....+++..+.||
T Consensus 537 ~N~dk~~leea~kaikev~khInedKrkte~~~~ifdkf~diegcpa~lvssnrsfi~~lev~i~l~~~~~~rg~~~~l~ 616 (850)
T KOG3524|consen 537 DNKDKNNLEEAAKAIKEVLKHINEDKRKTENFISIFDKFTDIEGCPAILVSSNRSFIRELEVSIALTSPGLQRGAKMKLF 616 (850)
T ss_pred cCcchhhHHHhhhhHHHHHHHhchhHHHHHHHHHHHHHHHhhhcCchhheeccchHHHHhhhhhhhcCcccccccceeee
Confidence 778999999999999999999999999999999999999999999999999999999999884 5566666788999999
Q ss_pred EeCCeEEEEEecCCCcccccCCCCCcccccccccccCCCCCCcceeEEeecccccceEeeecCCCCcccCceEEEEecCC
Q psy2293 650 LFTDVVEVCKKRSKYVNVLKSPNTSKMSLSTYKTQAKHPIDKTYKHIKLLSMTSIKKVYNVEDEAHDNDRQIFALRCRGS 729 (832)
Q Consensus 650 LF~D~Lli~k~k~~~~~~~k~p~~~~~~~~~~k~~~~~~~~~~yk~~~~i~L~~i~~v~~i~d~~~~~~~~~F~l~~~~~ 729 (832)
||+|+++|||.+.+..+.+.+|.. ++ ..+|||+.+|||++|+.|.||++. +.|+|+|.|.++++
T Consensus 617 lf~dvlei~k~r~~~~~tF~S~hs----------~t----r~p~KhI~li~LntIr~V~dIrE~--~~cpnAF~lllr~~ 680 (850)
T KOG3524|consen 617 LFHDVLEITKIRLARHASFASLHS----------RQ----RRPYKHIDLIQLNTIRSVFDIREI--AKCPNAFVLLLRHR 680 (850)
T ss_pred hhhhHHHHHHHhHhhhccccCCCC----------CC----CCcccceeeccHHHHHHHhhhhhh--ccCccceEEEEeCc
Confidence 999999999999766677777754 23 334999999999999999999988 88999999999999
Q ss_pred ccccceEEEEEecCCh-HHHHHHHHHHH-HHHHHhhcc-CccchhhcccccCCCCc-ccccccchhhhHHHHHHHHHh--
Q psy2293 730 DEVIETTYSFNIIDDT-LDKMSFLRELC-RQASAVYCI-NFDKFLEDISLANASSF-NIETHESSNSTLGRAIKFASK-- 803 (832)
Q Consensus 730 ~~~~~~~~~l~a~sse-~eK~~Wl~~L~-~~i~~~~~~-d~~~~~~~~~~~~~~el-~~~~~di~~~tl~~a~~~~~~-- 803 (832)
+++......|+.++.| ..+.+|++.|| +++++..|+ |+++.+. ...|.++ ...+.|+. +||++|.+.+.|
T Consensus 681 ~EQ~~v~~~Fq~tdDE~p~e~~y~K~LC~~hvA~~~ck~dA~nl~~---~~~pqs~f~~~t~~m~-STLS~A~~~~kKT~ 756 (850)
T KOG3524|consen 681 DEQGGIDTVFESNDDEDPSDMRYFKNLCGPHGAQMNCTEDAHNLSF---MPPPQSQFSNAQLTLA-STLSFARNQSRKTL 756 (850)
T ss_pred hhhcCeeEEEEecccccchhhHHHHHHhhHhhhcceeccchhccee---cCChHHhhhhhhhhHH-HHHHHHHHHHHHHH
Confidence 9888888889987766 34566999999 799999999 9998887 6667773 55566666 999999999977
Q ss_pred -hhccccccccCchhHHHHhhh-ccccCC
Q psy2293 804 -QVGRTLSLNRTPSTLRKVMSS-MKVRVA 830 (832)
Q Consensus 804 -~~~r~~S~~~~p~~l~ra~~~-~~~~~~ 830 (832)
+|+|||||+|||++.+|+++. +|++++
T Consensus 757 ~KV~RAfSF~KTPk~a~r~~~~a~mTs~G 785 (850)
T KOG3524|consen 757 GKVNRAFSFLKTPRVSCRPAALANMTSVG 785 (850)
T ss_pred hhhhhhcccccCchhhhhHHHHhhccCcC
Confidence 999999999999997775543 344444
|
|
| >KOG3523|consensus | Back alignment and domain information |
|---|
| >KOG4424|consensus | Back alignment and domain information |
|---|
| >KOG4305|consensus | Back alignment and domain information |
|---|
| >KOG3520|consensus | Back alignment and domain information |
|---|
| >KOG2996|consensus | Back alignment and domain information |
|---|
| >KOG3521|consensus | Back alignment and domain information |
|---|
| >KOG3518|consensus | Back alignment and domain information |
|---|
| >COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00325 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases | Back alignment and domain information |
|---|
| >cd00160 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain | Back alignment and domain information |
|---|
| >PF00621 RhoGEF: RhoGEF domain; InterPro: IPR000219 The Rho family GTPases Rho, Rac and CDC42 regulate a diverse array of cellular processes | Back alignment and domain information |
|---|
| >KOG2070|consensus | Back alignment and domain information |
|---|
| >KOG3522|consensus | Back alignment and domain information |
|---|
| >KOG0689|consensus | Back alignment and domain information |
|---|
| >KOG4240|consensus | Back alignment and domain information |
|---|
| >KOG3531|consensus | Back alignment and domain information |
|---|
| >KOG3519|consensus | Back alignment and domain information |
|---|
| >KOG1929|consensus | Back alignment and domain information |
|---|
| >cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3524|consensus | Back alignment and domain information |
|---|
| >KOG1929|consensus | Back alignment and domain information |
|---|
| >PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1 | Back alignment and domain information |
|---|
| >PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1 | Back alignment and domain information |
|---|
| >PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain | Back alignment and domain information |
|---|
| >cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4269|consensus | Back alignment and domain information |
|---|
| >cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >smart00292 BRCT breast cancer carboxy-terminal domain | Back alignment and domain information |
|---|
| >smart00292 BRCT breast cancer carboxy-terminal domain | Back alignment and domain information |
|---|
| >cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain | Back alignment and domain information |
|---|
| >KOG3226|consensus | Back alignment and domain information |
|---|
| >cd01223 PH_Vav Vav pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0966|consensus | Back alignment and domain information |
|---|
| >KOG3226|consensus | Back alignment and domain information |
|---|
| >KOG0931|consensus | Back alignment and domain information |
|---|
| >KOG3548|consensus | Back alignment and domain information |
|---|
| >KOG4362|consensus | Back alignment and domain information |
|---|
| >PLN03122 Poly [ADP-ribose] polymerase; Provisional | Back alignment and domain information |
|---|
| >cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A | Back alignment and domain information |
|---|
| >PLN03122 Poly [ADP-ribose] polymerase; Provisional | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >PLN03123 poly [ADP-ribose] polymerase; Provisional | Back alignment and domain information |
|---|
| >KOG2043|consensus | Back alignment and domain information |
|---|
| >PLN03123 poly [ADP-ribose] polymerase; Provisional | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >PRK06063 DNA polymerase III subunit epsilon; Provisional | Back alignment and domain information |
|---|
| >PRK06195 DNA polymerase III subunit epsilon; Validated | Back alignment and domain information |
|---|
| >PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >PRK07956 ligA NAD-dependent DNA ligase LigA; Validated | Back alignment and domain information |
|---|
| >PF15411 PH_10: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >KOG3548|consensus | Back alignment and domain information |
|---|
| >TIGR00575 dnlj DNA ligase, NAD-dependent | Back alignment and domain information |
|---|
| >COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >KOG2481|consensus | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0930|consensus | Back alignment and domain information |
|---|
| >PRK06195 DNA polymerase III subunit epsilon; Validated | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK07956 ligA NAD-dependent DNA ligase LigA; Validated | Back alignment and domain information |
|---|
| >PRK06063 DNA polymerase III subunit epsilon; Provisional | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >COG5275 BRCT domain type II [General function prediction only] | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >TIGR00575 dnlj DNA ligase, NAD-dependent | Back alignment and domain information |
|---|
| >KOG2043|consensus | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG0966|consensus | Back alignment and domain information |
|---|
| >KOG0323|consensus | Back alignment and domain information |
|---|
| >KOG3522|consensus | Back alignment and domain information |
|---|
| >COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1729|consensus | Back alignment and domain information |
|---|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2481|consensus | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4362|consensus | Back alignment and domain information |
|---|
| >KOG0323|consensus | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG5275 BRCT domain type II [General function prediction only] | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2093|consensus | Back alignment and domain information |
|---|
| >cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A | Back alignment and domain information |
|---|
| >KOG2059|consensus | Back alignment and domain information |
|---|
| >KOG0521|consensus | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >PRK05601 DNA polymerase III subunit epsilon; Validated | Back alignment and domain information |
|---|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
| >cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 832 | ||||
| 3jzy_A | 510 | Crystal Structure Of Human Intersectin 2 C2 Domain | 7e-12 | ||
| 3t06_A | 418 | Crystal Structure Of The DhPH FRAGMENT OF PDZRHOGEF | 1e-11 | ||
| 3gf9_A | 295 | Crystal Structure Of Human Intersectin 2 Rhogef Dom | 2e-11 | ||
| 2vrw_B | 406 | Critical Structural Role For The Ph And C1 Domains | 2e-11 | ||
| 2dfk_A | 402 | Crystal Structure Of The Cdc42-Collybistin Ii Compl | 4e-11 | ||
| 3jv3_A | 283 | Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l | 5e-11 | ||
| 3qbv_B | 351 | Structure Of Designed Orthogonal Interaction Betwee | 7e-11 | ||
| 3kz1_A | 383 | Crystal Structure Of The Complex Of Pdz-Rhogef DhPH | 1e-10 | ||
| 1xcg_A | 368 | Crystal Structure Of Human Rhoa In Complex With DhP | 1e-10 | ||
| 1ki1_B | 352 | Guanine Nucleotide Exchange Region Of Intersectin I | 1e-10 | ||
| 1txd_A | 385 | Crystal Structure Of The Dh/ph Domains Of Leukemia- | 8e-10 | ||
| 3olc_X | 298 | Crystal Structure Of The N-Terminal Region Of Topbp | 1e-09 | ||
| 2xnk_A | 292 | Structure And Function Of The Rad9-Binding Region O | 1e-09 | ||
| 2xnh_A | 287 | Structure And Function Of The Rad9-Binding Region O | 1e-09 | ||
| 2pz1_A | 466 | Crystal Structure Of Auto-Inhibited Asef Length = 4 | 1e-09 | ||
| 3ky9_A | 587 | Autoinhibited Vav1 Length = 587 | 3e-09 | ||
| 2dx1_A | 482 | Crystal Structure Of Rhogef Protein Asef Length = 4 | 4e-09 | ||
| 3bji_A | 378 | Structural Basis Of Promiscuous Guanine Nucleotide | 5e-09 | ||
| 1foe_A | 377 | Crystal Structure Of Rac1 In Complex With The Guani | 6e-09 | ||
| 2z0q_A | 352 | Crystal Structure Of Dh-Ph Domain Of Rhogef3(Xpln) | 2e-08 | ||
| 1f5x_A | 208 | Nmr Structure Of The Y174 Autoinhibited Dbl Homolog | 5e-08 | ||
| 3l46_A | 112 | Crystal Structure Of The Second Brct Domain Of Epit | 2e-07 | ||
| 3eo2_A | 231 | Crystal Structure Of The Rhogef Domain Of Human Neu | 2e-07 | ||
| 2rgn_B | 354 | Crystal Structure Of P63rhogef Complex With Galpha- | 3e-07 | ||
| 2cou_A | 109 | Solution Structure Of The Second Brct Domain Of Epi | 1e-06 | ||
| 3p6a_A | 377 | Crystal Structure Of The DhPH DOMAINS OF P115-Rhoge | 6e-06 | ||
| 3odo_A | 375 | Crystal Structure Of The DhPH DOMAINS OF P115-Rhoge | 8e-06 | ||
| 3odx_A | 417 | Crystal Structure Of An N-Terminally Truncated Link | 1e-05 | ||
| 3odw_A | 536 | Crystal Structure Of The Linker-DhPH DOMAINS OF P11 | 1e-05 | ||
| 3mpx_A | 434 | Crystal Structure Of The Dh And Ph-1 Domains Of Hum | 4e-05 | ||
| 1rj2_A | 353 | Crystal Structure Of The DhPH FRAGMENT OF DBS WITHO | 5e-05 | ||
| 1kzg_A | 353 | Dbscdc42(Y889f) Length = 353 | 6e-05 | ||
| 1lb1_A | 353 | Crystal Structure Of The Dbl And Pleckstrin Homolog | 6e-05 | ||
| 1kz7_A | 353 | Crystal Structure Of The DhPH FRAGMENT OF MURINE DB | 3e-04 |
| >pdb|3JZY|A Chain A, Crystal Structure Of Human Intersectin 2 C2 Domain Length = 510 | Back alignment and structure |
|
| >pdb|3T06|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF PDZRHOGEF WITH N-Terminal Regulatory Elements In Complex With Human Rhoa Length = 418 | Back alignment and structure |
| >pdb|3GF9|A Chain A, Crystal Structure Of Human Intersectin 2 Rhogef Domain Length = 295 | Back alignment and structure |
| >pdb|2VRW|B Chain B, Critical Structural Role For The Ph And C1 Domains Of The Vav1 Exchange Factor Length = 406 | Back alignment and structure |
| >pdb|2DFK|A Chain A, Crystal Structure Of The Cdc42-Collybistin Ii Complex Length = 402 | Back alignment and structure |
| >pdb|3JV3|A Chain A, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l Length = 283 | Back alignment and structure |
| >pdb|3QBV|B Chain B, Structure Of Designed Orthogonal Interaction Between Cdc42 And Nucleotide Exchange Domains Of Intersectin Length = 351 | Back alignment and structure |
| >pdb|3KZ1|A Chain A, Crystal Structure Of The Complex Of Pdz-Rhogef DhPH DOMAINS WITH GTP- Gamma-S Activated Rhoa Length = 383 | Back alignment and structure |
| >pdb|1XCG|A Chain A, Crystal Structure Of Human Rhoa In Complex With DhPH Fragment Of Pdzrhogef Length = 368 | Back alignment and structure |
| >pdb|1KI1|B Chain B, Guanine Nucleotide Exchange Region Of Intersectin In Complex With Cdc42 Length = 352 | Back alignment and structure |
| >pdb|1TXD|A Chain A, Crystal Structure Of The Dh/ph Domains Of Leukemia-associated Rhogef Length = 385 | Back alignment and structure |
| >pdb|3OLC|X Chain X, Crystal Structure Of The N-Terminal Region Of Topbp1 Length = 298 | Back alignment and structure |
| >pdb|2XNK|A Chain A, Structure And Function Of The Rad9-Binding Region Of The Dna Damage Checkpoint Adaptor Topbp1 Length = 292 | Back alignment and structure |
| >pdb|2XNH|A Chain A, Structure And Function Of The Rad9-Binding Region Of The Dna Damage Checkpoint Adaptor Topbp1 Length = 287 | Back alignment and structure |
| >pdb|2PZ1|A Chain A, Crystal Structure Of Auto-Inhibited Asef Length = 466 | Back alignment and structure |
| >pdb|3KY9|A Chain A, Autoinhibited Vav1 Length = 587 | Back alignment and structure |
| >pdb|2DX1|A Chain A, Crystal Structure Of Rhogef Protein Asef Length = 482 | Back alignment and structure |
| >pdb|3BJI|A Chain A, Structural Basis Of Promiscuous Guanine Nucleotide Exchange By The T-Cell Essential Vav1 Length = 378 | Back alignment and structure |
| >pdb|1FOE|A Chain A, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1 Length = 377 | Back alignment and structure |
| >pdb|2Z0Q|A Chain A, Crystal Structure Of Dh-Ph Domain Of Rhogef3(Xpln) Length = 352 | Back alignment and structure |
| >pdb|1F5X|A Chain A, Nmr Structure Of The Y174 Autoinhibited Dbl Homology Domain Length = 208 | Back alignment and structure |
| >pdb|3L46|A Chain A, Crystal Structure Of The Second Brct Domain Of Epithelial Cell Transforming 2 (Ect2) Length = 112 | Back alignment and structure |
| >pdb|3EO2|A Chain A, Crystal Structure Of The Rhogef Domain Of Human Neuroepithelial Cell- Transforming Gene 1 Protein Length = 231 | Back alignment and structure |
| >pdb|2RGN|B Chain B, Crystal Structure Of P63rhogef Complex With Galpha-Q And Rhoa Length = 354 | Back alignment and structure |
| >pdb|2COU|A Chain A, Solution Structure Of The Second Brct Domain Of Epithelial Cell Transforming 2 Length = 109 | Back alignment and structure |
| >pdb|3P6A|A Chain A, Crystal Structure Of The DhPH DOMAINS OF P115-Rhogef (R399e Mutant) Length = 377 | Back alignment and structure |
| >pdb|3ODO|A Chain A, Crystal Structure Of The DhPH DOMAINS OF P115-Rhogef Length = 375 | Back alignment and structure |
| >pdb|3ODX|A Chain A, Crystal Structure Of An N-Terminally Truncated Linker-DhPH DOMAINS OF P115-Rhogef Length = 417 | Back alignment and structure |
| >pdb|3ODW|A Chain A, Crystal Structure Of The Linker-DhPH DOMAINS OF P115-Rhogef Length = 536 | Back alignment and structure |
| >pdb|3MPX|A Chain A, Crystal Structure Of The Dh And Ph-1 Domains Of Human Fgd5 Length = 434 | Back alignment and structure |
| >pdb|1RJ2|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF DBS WITHOUT Bound Gtpase Length = 353 | Back alignment and structure |
| >pdb|1KZG|A Chain A, Dbscdc42(Y889f) Length = 353 | Back alignment and structure |
| >pdb|1LB1|A Chain A, Crystal Structure Of The Dbl And Pleckstrin Homology Domains Of Dbs In Complex With Rhoa Length = 353 | Back alignment and structure |
| >pdb|1KZ7|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF MURINE DBS IN Complex With The Placental Isoform Of Human Cdc42 Length = 353 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 4e-61
Identities = 61/279 (21%), Positives = 110/279 (39%), Gaps = 16/279 (5%)
Query: 390 DESDVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNPLEEKLNTNEC----ILNQA 445
E+ G S + +EL +E YV +L+ L F + L+ + L +
Sbjct: 11 RENLYFQGGQSRALVIAQELLSSEKAYVEMLQHLNLDFHGAVMRALDDMDHEGRDTLARE 70
Query: 446 EMKIIFGDLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFVKHCTAFKKVYPPFINFFQD 505
E++ +L I D H+ +L++L+ N+ + +VF+ F + I F
Sbjct: 71 ELRQGLSELPAIHDLHQGILEELEERLSNWESQQKVADVFLAREQGFD-HHATHILQFDR 129
Query: 506 SNSLLKE-KEKNSRFLAFLKLCYMNLRDLGLPEIDKQTLPDLLIRPVQRLGSISLLLNDI 564
LL E + R A ++ + + QT L+R VQRL +LL D
Sbjct: 130 YLGLLSENCLHSPRLAAAVREFEQS------VQGGSQTAKHRLLRVVQRLFQYQVLLTDY 183
Query: 565 LKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIYQDIENCPPQLINSHR 624
L N S ++ AL I V N++ ++ +N + L I + L+ R
Sbjct: 184 LNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHIEHSVRGQGD-LLQPGR 242
Query: 625 SFVLKCDVIELSNMLSHRGDCITLFLFTDVVEVCKKRSK 663
F+ + +++++ LFL DV+ +
Sbjct: 243 EFLKEGTLMKVT---GKNRRPRHLFLMNDVLLYTYPQKD 278
|
| >2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A Length = 346 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
| >1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A* Length = 368 | Back alignment and structure |
|---|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 Length = 402 | Back alignment and structure |
|---|
| >1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 Length = 377 | Back alignment and structure |
|---|
| >1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1 Length = 209 | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466 | Back alignment and structure |
|---|
| >3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
| >3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A Length = 283 | Back alignment and structure |
|---|
| >3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A Length = 377 | Back alignment and structure |
|---|
| >1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A Length = 385 | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B Length = 510 | Back alignment and structure |
|---|
| >3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A Length = 536 | Back alignment and structure |
|---|
| >1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A Length = 354 | Back alignment and structure |
|---|
| >3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* Length = 298 | Back alignment and structure |
|---|
| >2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A Length = 353 | Back alignment and structure |
|---|
| >1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A Length = 311 | Back alignment and structure |
|---|
| >2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 109 | Back alignment and structure |
|---|
| >2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 109 | Back alignment and structure |
|---|
| >3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} Length = 112 | Back alignment and structure |
|---|
| >3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} Length = 112 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A Length = 1049 | Back alignment and structure |
|---|
| >1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3 Length = 229 | Back alignment and structure |
|---|
| >2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 129 | Back alignment and structure |
|---|
| >2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 129 | Back alignment and structure |
|---|
| >1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A Length = 214 | Back alignment and structure |
|---|
| >1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A Length = 214 | Back alignment and structure |
|---|
| >2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A Length = 210 | Back alignment and structure |
|---|
| >2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A Length = 210 | Back alignment and structure |
|---|
| >3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A* Length = 199 | Back alignment and structure |
|---|
| >2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A Length = 209 | Back alignment and structure |
|---|
| >3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} Length = 219 | Back alignment and structure |
|---|
| >3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} Length = 219 | Back alignment and structure |
|---|
| >3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* Length = 235 | Back alignment and structure |
|---|
| >3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* Length = 235 | Back alignment and structure |
|---|
| >3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A* Length = 220 | Back alignment and structure |
|---|
| >1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 Length = 132 | Back alignment and structure |
|---|
| >1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 Length = 132 | Back alignment and structure |
|---|
| >2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens} Length = 97 | Back alignment and structure |
|---|
| >2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens} Length = 97 | Back alignment and structure |
|---|
| >2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} Length = 185 | Back alignment and structure |
|---|
| >3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A* Length = 107 | Back alignment and structure |
|---|
| >2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens} Length = 106 | Back alignment and structure |
|---|
| >3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} PDB: 3pc8_A* 3qvg_B* 1cdz_A Length = 104 | Back alignment and structure |
|---|
| >1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B Length = 259 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 832 | |||
| 1xcg_A | 368 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 100.0 | |
| 2dfk_A | 402 | Collybistin II; DH domain, PH domain, cell cycle; | 100.0 | |
| 2z0q_A | 346 | XPLN, RHO guanine nucleotide exchange factor 3; DH | 100.0 | |
| 3t06_A | 418 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 100.0 | |
| 3p6a_A | 377 | RHO guanine nucleotide exchange factor 1; regulati | 100.0 | |
| 2pz1_A | 466 | RHO guanine nucleotide exchange factor 4; helical | 100.0 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 100.0 | |
| 1txd_A | 385 | RHO guanine nucleotide exchange factor 12; helical | 100.0 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 100.0 | |
| 3odw_A | 536 | RHO guanine nucleotide exchange factor 1; regulati | 100.0 | |
| 1dbh_A | 354 | Protein (human SOS 1); guanine nucleotide exchange | 100.0 | |
| 3olc_X | 298 | DNA topoisomerase 2-binding protein 1; BRCT domain | 100.0 | |
| 1foe_A | 377 | T-lymphoma invasion and metastasis inducing protei | 100.0 | |
| 3ky9_A | 587 | Proto-oncogene VAV; calponin homology domain, DBL | 100.0 | |
| 1kz7_A | 353 | Guanine nucleotide exchange factor DBS; guanine nu | 100.0 | |
| 2rgn_B | 354 | RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p | 100.0 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 100.0 | |
| 1nty_A | 311 | Triple functional domain protein; DBL, pleckstrin, | 100.0 | |
| 3ksy_A | 1049 | SOS-1, SON of sevenless homolog 1; RAS, RAS activa | 100.0 | |
| 3jv3_A | 283 | Intersectin-1; SH3 domain, DH domain, guanine nucl | 100.0 | |
| 1by1_A | 209 | Protein (PIX); RHO-GTPase exchange factor, transpo | 100.0 | |
| 2nte_A | 210 | BARD-1, BRCA1-associated ring domain protein 1; BR | 99.91 | |
| 1l0b_A | 229 | BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu | 99.91 | |
| 1t15_A | 214 | Breast cancer type 1 susceptibility protein; prote | 99.9 | |
| 3l46_A | 112 | Protein ECT2; alternative splicing, guanine-nucleo | 99.9 | |
| 3u3z_A | 199 | Microcephalin; DNA repair, cell cycle regulation, | 99.89 | |
| 2etx_A | 209 | Mediator of DNA damage checkpoint protein 1; tande | 99.88 | |
| 3ii6_X | 263 | DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter | 99.87 | |
| 2cou_A | 109 | ECT2 protein; BRCT domain, RHO GTPase, structural | 99.87 | |
| 3sqd_A | 219 | PAX-interacting protein 1; tandem BRCT domains, ce | 99.85 | |
| 1kzy_C | 259 | Tumor suppressor P53-binding protein 1; tandem-BRC | 99.83 | |
| 3olc_X | 298 | DNA topoisomerase 2-binding protein 1; BRCT domain | 99.81 | |
| 3al2_A | 235 | DNA topoisomerase 2-binding protein 1; BRCT domain | 99.77 | |
| 2vxb_A | 241 | DNA repair protein RHP9; BRCT, nucleus, cell cycle | 99.76 | |
| 1z56_C | 264 | DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA | 99.76 | |
| 2lg1_A | 185 | A-kinase anchor protein 13; metal binding protein; | 99.7 | |
| 3l46_A | 112 | Protein ECT2; alternative splicing, guanine-nucleo | 99.69 | |
| 2cou_A | 109 | ECT2 protein; BRCT domain, RHO GTPase, structural | 99.66 | |
| 3l41_A | 220 | BRCT-containing protein 1; BRC1, BRCT domain, tand | 99.63 | |
| 2d8m_A | 129 | DNA-repair protein XRCC1; parallel beta-sheet, DNA | 99.61 | |
| 2d8m_A | 129 | DNA-repair protein XRCC1; parallel beta-sheet, DNA | 99.6 | |
| 3l3e_A | 107 | DNA topoisomerase 2-binding protein 1; BRCT domain | 99.6 | |
| 4id3_A | 92 | DNA repair protein REV1; BRCT domain, protein bind | 99.6 | |
| 2ebw_A | 97 | DNA repair protein REV1; A/B/A 3 layers, parallel | 99.58 | |
| 3l3e_A | 107 | DNA topoisomerase 2-binding protein 1; BRCT domain | 99.56 | |
| 1zc3_B | 113 | Exocyst complex protein EXO84; exocytosis, small G | 99.53 | |
| 4id3_A | 92 | DNA repair protein REV1; BRCT domain, protein bind | 99.49 | |
| 3pa6_A | 107 | Microcephalin; BRCT domain, cell cycle; HET: MSE; | 99.48 | |
| 2ebw_A | 97 | DNA repair protein REV1; A/B/A 3 layers, parallel | 99.48 | |
| 1z56_C | 264 | DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA | 99.45 | |
| 1wf6_A | 132 | Similar to S.pombe -RAD4+/CUT5+product (A40727); B | 99.45 | |
| 3pa6_A | 107 | Microcephalin; BRCT domain, cell cycle; HET: MSE; | 99.43 | |
| 3pc6_A | 104 | DNA repair protein XRCC1; BRCT domain, protein:pro | 99.42 | |
| 3qwm_A | 140 | Iqsec1, IQ motif and SEC7 domain-containing protei | 99.4 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 99.32 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 99.3 | |
| 3ii6_X | 263 | DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter | 99.3 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 99.29 | |
| 1t15_A | 214 | Breast cancer type 1 susceptibility protein; prote | 99.29 | |
| 1l0b_A | 229 | BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu | 99.29 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 99.28 | |
| 2vxb_A | 241 | DNA repair protein RHP9; BRCT, nucleus, cell cycle | 99.25 | |
| 3sqd_A | 219 | PAX-interacting protein 1; tandem BRCT domains, ce | 99.25 | |
| 3pc6_A | 104 | DNA repair protein XRCC1; BRCT domain, protein:pro | 99.24 | |
| 3u3z_A | 199 | Microcephalin; DNA repair, cell cycle regulation, | 99.23 | |
| 1kzy_C | 259 | Tumor suppressor P53-binding protein 1; tandem-BRC | 99.23 | |
| 1wf6_A | 132 | Similar to S.pombe -RAD4+/CUT5+product (A40727); B | 99.22 | |
| 2etx_A | 209 | Mediator of DNA damage checkpoint protein 1; tande | 99.2 | |
| 2nte_A | 210 | BARD-1, BRCA1-associated ring domain protein 1; BR | 99.19 | |
| 3al2_A | 235 | DNA topoisomerase 2-binding protein 1; BRCT domain | 99.11 | |
| 1l7b_A | 92 | DNA ligase; BRCT, autostructure, structural genomi | 99.1 | |
| 1v61_A | 132 | RAC/CDC42 guanine nucleotide exchange factor (GEF) | 99.04 | |
| 2ep8_A | 100 | Pescadillo homolog 1; A/B/A 3 layers, nucleolus, r | 99.02 | |
| 1fho_A | 119 | UNC-89; pleckstrin homology domain, electrostatics | 98.98 | |
| 2jw5_A | 106 | DNA polymerase lambda; BRCT domain, family X polym | 98.91 | |
| 3pc7_A | 88 | DNA ligase 3; DNA repair, BRCT domain, protein:pro | 98.9 | |
| 1l7b_A | 92 | DNA ligase; BRCT, autostructure, structural genomi | 98.88 | |
| 2k6g_A | 109 | Replication factor C subunit 1; protein, BRCT, DNA | 98.88 | |
| 3l41_A | 220 | BRCT-containing protein 1; BRC1, BRCT domain, tand | 98.86 | |
| 2ebu_A | 112 | Replication factor C subunit 1; A/B/A 3 layers, pa | 98.84 | |
| 2cok_A | 113 | Poly [ADP-ribose] polymerase-1; BRCT domain, DNA r | 98.68 | |
| 2coe_A | 120 | Deoxynucleotidyltransferase, terminal variant; BRC | 98.59 | |
| 2k6g_A | 109 | Replication factor C subunit 1; protein, BRCT, DNA | 98.58 | |
| 2ep8_A | 100 | Pescadillo homolog 1; A/B/A 3 layers, nucleolus, r | 98.56 | |
| 2ebu_A | 112 | Replication factor C subunit 1; A/B/A 3 layers, pa | 98.54 | |
| 3pc7_A | 88 | DNA ligase 3; DNA repair, BRCT domain, protein:pro | 98.36 | |
| 2coe_A | 120 | Deoxynucleotidyltransferase, terminal variant; BRC | 98.36 | |
| 4gou_A | 518 | EHRGS-rhogef; RGS domain, DH domain, PH domain, RH | 98.27 | |
| 2cok_A | 113 | Poly [ADP-ribose] polymerase-1; BRCT domain, DNA r | 98.26 | |
| 2jw5_A | 106 | DNA polymerase lambda; BRCT domain, family X polym | 98.24 | |
| 2dun_A | 133 | POL MU, DNA polymerase MU; layers A/B/A, parallel | 98.2 | |
| 3huf_A | 325 | DNA repair and telomere maintenance protein NBS1; | 97.94 | |
| 3t7k_A | 256 | RTT107, regulator of TY1 transposition protein 107 | 97.89 | |
| 2dun_A | 133 | POL MU, DNA polymerase MU; layers A/B/A, parallel | 97.84 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 97.69 | |
| 1dgs_A | 667 | DNA ligase; AMP complex, NAD+-dependent; HET: DNA | 97.51 | |
| 4gns_A | 290 | Chitin biosynthesis protein CHS5; FN3, BRCT, tetra | 97.45 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 97.43 | |
| 2owo_A | 671 | DNA ligase; protein-DNA complex, ligase-DNA comple | 97.38 | |
| 2lul_A | 164 | Tyrosine-protein kinase TEC; structural genomics, | 97.36 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 97.36 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 97.34 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 97.32 | |
| 2l42_A | 106 | DNA-binding protein RAP1; BRCT domain, protein bin | 97.29 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 97.28 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 97.27 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 97.26 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 97.23 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 97.2 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 97.2 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 97.14 | |
| 1btk_A | 169 | Bruton'S tyrosine kinase; transferase, PH domain, | 97.1 | |
| 1x1f_A | 149 | Signal-transducing adaptor protein 1; docking prot | 97.08 | |
| 1dgs_A | 667 | DNA ligase; AMP complex, NAD+-dependent; HET: DNA | 97.03 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 97.03 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 96.97 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 96.93 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 96.9 | |
| 1wi1_A | 126 | Calcium-dependent activator protein for secretion, | 96.85 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 96.81 | |
| 2p0d_A | 129 | RHO GTPase-activating protein 9; protein-phosphoin | 96.8 | |
| 2owo_A | 671 | DNA ligase; protein-DNA complex, ligase-DNA comple | 96.8 | |
| 2dhk_A | 119 | TBC1 domain family member 2; PH domain, paris-1, s | 96.78 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 96.78 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 96.68 | |
| 1dyn_A | 125 | Dynamin; signal transduction protein; 2.20A {Homo | 96.65 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 96.65 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 96.63 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 96.5 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 96.47 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 96.47 | |
| 2dtc_A | 126 | RAL guanine nucleotide exchange factor ralgps1A; P | 96.42 | |
| 4a6h_A | 120 | Phosphatidylinositol 4,5-bisphosphate-binding Pro | 96.41 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 96.35 | |
| 2l42_A | 106 | DNA-binding protein RAP1; BRCT domain, protein bin | 96.34 | |
| 2rlo_A | 128 | Centaurin-gamma 1; split PH domain, alternative sp | 96.31 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 96.3 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 96.23 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 96.18 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 96.12 | |
| 1v88_A | 130 | Oxysterol binding protein-related protein 8; vesic | 96.11 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 96.1 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 96.06 | |
| 3huf_A | 325 | DNA repair and telomere maintenance protein NBS1; | 96.02 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 96.01 | |
| 1v5p_A | 126 | Pleckstrin homology domain-containing, family A; T | 96.0 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 95.96 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 95.87 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 95.84 | |
| 2coc_A | 112 | FYVE, rhogef and PH domain containing protein 3; s | 95.74 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 95.73 | |
| 3a8p_A | 263 | T-lymphoma invasion and metastasis-inducing protei | 95.6 | |
| 3pp2_A | 124 | RHO GTPase-activating protein 27; PH domain, GTPas | 95.14 | |
| 1qqg_A | 264 | IRS-1, insulin receptor substrate 1; beta-sandwhic | 95.09 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 95.04 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 95.0 | |
| 3t7k_A | 256 | RTT107, regulator of TY1 transposition protein 107 | 94.85 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 94.81 | |
| 2fjl_A | 150 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 94.79 | |
| 2d9w_A | 127 | Docking protein 2; PH domain, structural genomics, | 94.61 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 94.16 | |
| 2rov_A | 117 | RHO-associated protein kinase 2; ATP-binding, coil | 93.53 | |
| 3tca_A | 291 | Amyloid beta A4 precursor protein-binding family 1 | 93.0 | |
| 4gns_A | 290 | Chitin biosynthesis protein CHS5; FN3, BRCT, tetra | 92.83 | |
| 3hk0_A | 256 | Growth factor receptor-bound protein 10; GRB10, RA | 90.03 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 88.67 | |
| 3qbz_A | 160 | DDK kinase regulatory subunit DBF4; FHA domain,RAD | 88.58 | |
| 3oq0_A | 151 | DBF4, protein DNA52; DDK, BRCT, RAD53, replication | 88.3 | |
| 3oq4_A | 134 | DBF4, protein DNA52; DDK, BRCT, RAD53, replication | 86.05 | |
| 4gmv_A | 281 | RAS-associated and pleckstrin homology domains-CO | 85.62 | |
| 2ys3_A | 137 | UNC-112-related protein 2; PH domain, kindlin-3, s | 85.48 | |
| 1w1g_A | 151 | HPDK1, 3-phosphoinositide dependent protein kinase | 83.58 | |
| 3qbz_A | 160 | DDK kinase regulatory subunit DBF4; FHA domain,RAD | 83.54 | |
| 1mai_A | 131 | Phospholipase C delta-1; pleckstrin, inositol tris | 80.7 |
| >1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=448.53 Aligned_cols=347 Identities=21% Similarity=0.328 Sum_probs=290.7
Q ss_pred CCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHhcCHHHHHHHHH
Q psy2293 383 PDNFLATDESDVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNPLEEKLNTNECILNQAEMKIIFGDLCPIFDTHK 462 (832)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~kRq~vi~ELl~TE~~Yv~~L~~l~~~f~~~L~~~~~~~~~~l~~~~~~~IF~ni~~I~~~h~ 462 (832)
|...++.+..+.+++++.+|+++++||++||++||++|+.+.+.|+.||... +++++.++..||+||++|+++|+
T Consensus 3 W~~~v~~~~~~~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~~-----~~l~~~~~~~iF~ni~~i~~~h~ 77 (368)
T 1xcg_A 3 WQHTVGKDVVAGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKE-----NLMPREELARLFPNLPELIEIHN 77 (368)
T ss_dssp TTTSSSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----TSSCHHHHHHHSSSHHHHHHHHH
T ss_pred chhhcCHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCHHHHHHHhCCHHHHHHHHH
Confidence 4445667778899999999999999999999999999999999999999875 68999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCchHHHHHHhHH-----HHhhhhhHHHhhHHHHHHHHHHHHhc-hHHHHHHHHHHhccccCCCC
Q psy2293 463 DLLKDLKYLEQNYSDSVSIGEVFVKHCT-----AFKKVYPPFINFFQDSNSLLKEKEKN-SRFLAFLKLCYMNLRDLGLP 536 (832)
Q Consensus 463 ~fl~~L~~~~~~~~~~~~Ig~vfl~~~~-----~f~~~Y~~Y~~n~~~a~~~l~~~~~~-~~F~~fl~~~~~~~~~~~~~ 536 (832)
.|+.+|+.+...|+....||++|+++.. .|+++|..||.|++.|...+..+.++ +.|++|++.++. .+
T Consensus 78 ~fl~~L~~~~~~~~~~~~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~fl~~~~~------~~ 151 (368)
T 1xcg_A 78 SWCEAMKKLREEGPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAES------HP 151 (368)
T ss_dssp HHHHHHHHHHHTCSSCCCCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHT------SG
T ss_pred HHHHHHHHHHhcCCCcCcHHHHHHHHccchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCCHHHHHHHHHHHh------Ch
Confidence 9999999999988888899999999853 56799999999999999999998765 999999999999 89
Q ss_pred CcCCCChhHHhhhHHHHHhhHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhccCC-
Q psy2293 537 EIDKQTLPDLLIRPVQRLGSISLLLNDILKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIYQDIENC- 615 (832)
Q Consensus 537 ~~~~l~L~slLi~PvQRi~rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~l~~~iNe~~~~~E~~~~l~~l~~~i~~~- 615 (832)
.|++++|.+||++|||||+||+|||++|+|+|+++|+||..|++|++.++.++.++|+.+++.|+..++.+++.+|++.
T Consensus 152 ~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~~~e~~~~l~~i~~~l~~~~ 231 (368)
T 1xcg_A 152 QCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATA 231 (368)
T ss_dssp GGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHH
T ss_pred hhccCChHHHhhhHhhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred ------C-----CccccCCCeEEeeeeEEEecccccCCccEEEEEEeCCeEEEEEecCCCcccccCCCCCcccccccccc
Q psy2293 616 ------P-----PQLINSHRSFVLKCDVIELSNMLSHRGDCITLFLFTDVVEVCKKRSKYVNVLKSPNTSKMSLSTYKTQ 684 (832)
Q Consensus 616 ------~-----~~L~~~~R~li~~g~l~~~~~~~~~k~~~~~lfLF~D~Lli~k~k~~~~~~~k~p~~~~~~~~~~k~~ 684 (832)
| .+|..++|+|+++|.+.+... .++.+++|+|||||+||+||++... ..++.... .
T Consensus 232 ~~~~~~pl~~~~~~l~~~~R~li~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k-~~~~~~~~---------~- 298 (368)
T 1xcg_A 232 LERASNPLAAEFKSLDLTTRKMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEK-LLLKCHSK---------T- 298 (368)
T ss_dssp HHSCSCTTTGGGGGCCGGGSCEEEEEEEEECCS--SSCCCEEEEEEESSEEEEEEECSSC-EECCC--------------
T ss_pred hhhcccchhhhhhhcccccceEEeecceEeeec--CCCeeEEEEEcccccHHHhhccccc-ceeeeccc---------c-
Confidence 1 246678999999999986432 3567899999999999999987543 12221110 0
Q ss_pred cCCCCCCcceeEEeecccccceEeeecCCCCcccCceEEEEecCCccccceEEEEEecCChHHHHHHHHHHHHHHHH
Q psy2293 685 AKHPIDKTYKHIKLLSMTSIKKVYNVEDEAHDNDRQIFALRCRGSDEVIETTYSFNIIDDTLDKMSFLRELCRQASA 761 (832)
Q Consensus 685 ~~~~~~~~yk~~~~i~L~~i~~v~~i~d~~~~~~~~~F~l~~~~~~~~~~~~~~l~a~sse~eK~~Wl~~L~~~i~~ 761 (832)
..+.....|.++..+||+.+ .|.++. +..++|.++.... .+....|+|+|.+ +.+|+.|+++|.+++.+
T Consensus 299 ~~~~~~~~~~~~~~i~l~~~-~v~~~~-----~~~~~f~i~~~~~-~g~~~~~~l~a~s-~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 299 AVGSSDSKQTFSPVLKLNAV-LIRSVA-----TDKRAFFIICTSK-LGPPQIYELVALT-SSDKNTWMELLEEAVRN 367 (368)
T ss_dssp ---------CCCSEEEGGGE-EEEECS-----SCSSEEEEEECCS-SSTTCEEEEECSS-HHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCcCCceEccce-eeeccc-----CCCceEEEEEecC-CCCceEEEEEcCC-HHHHHHHHHHHHHHHhc
Confidence 00011224777778999998 455532 3358898876532 2335789999865 55999999999999875
|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A | Back alignment and structure |
|---|
| >3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens} | Back alignment and structure |
|---|
| >3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A | Back alignment and structure |
|---|
| >1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A | Back alignment and structure |
|---|
| >1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A | Back alignment and structure |
|---|
| >3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* | Back alignment and structure |
|---|
| >1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A | Back alignment and structure |
|---|
| >1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A | Back alignment and structure |
|---|
| >2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
| >1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A | Back alignment and structure |
|---|
| >3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A | Back alignment and structure |
|---|
| >3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A | Back alignment and structure |
|---|
| >1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1 | Back alignment and structure |
|---|
| >2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A | Back alignment and structure |
|---|
| >1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3 | Back alignment and structure |
|---|
| >1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A | Back alignment and structure |
|---|
| >3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} | Back alignment and structure |
|---|
| >3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A* | Back alignment and structure |
|---|
| >2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A | Back alignment and structure |
|---|
| >3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A* | Back alignment and structure |
|---|
| >2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B | Back alignment and structure |
|---|
| >3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* | Back alignment and structure |
|---|
| >3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* | Back alignment and structure |
|---|
| >2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A* | Back alignment and structure |
|---|
| >1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} | Back alignment and structure |
|---|
| >2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A* | Back alignment and structure |
|---|
| >2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
| >2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B* | Back alignment and structure |
|---|
| >4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
| >3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A* | Back alignment and structure |
|---|
| >2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 | Back alignment and structure |
|---|
| >3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A* | Back alignment and structure |
|---|
| >3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A | Back alignment and structure |
|---|
| >3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens} | Back alignment and structure |
|---|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A* | Back alignment and structure |
|---|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A | Back alignment and structure |
|---|
| >1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3 | Back alignment and structure |
|---|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A* | Back alignment and structure |
|---|
| >3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A | Back alignment and structure |
|---|
| >3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A* | Back alignment and structure |
|---|
| >1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B | Back alignment and structure |
|---|
| >1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 | Back alignment and structure |
|---|
| >2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A | Back alignment and structure |
|---|
| >2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A | Back alignment and structure |
|---|
| >3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* | Back alignment and structure |
|---|
| >1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2 | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A* | Back alignment and structure |
|---|
| >1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2 | Back alignment and structure |
|---|
| >2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A | Back alignment and structure |
|---|
| >3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A* | Back alignment and structure |
|---|
| >2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A | Back alignment and structure |
|---|
| >2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A | Back alignment and structure |
|---|
| >2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A* | Back alignment and structure |
|---|
| >2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A | Back alignment and structure |
|---|
| >2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A* | Back alignment and structure |
|---|
| >3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* | Back alignment and structure |
|---|
| >3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A | Back alignment and structure |
|---|
| >2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A* | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A* | Back alignment and structure |
|---|
| >4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A* | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* | Back alignment and structure |
|---|
| >2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
| >3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} | Back alignment and structure |
|---|
| >4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A | Back alignment and structure |
|---|
| >2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A | Back alignment and structure |
|---|
| >3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 832 | ||||
| d1by1a_ | 209 | a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxI | 4e-37 | |
| d1xcga1 | 228 | a.87.1.1 (A:714-941) Rho guanine nucleotide exchan | 9e-37 | |
| d1ki1b1 | 210 | a.87.1.1 (B:1229-1438) GEF of intersectin {Human ( | 3e-36 | |
| d1txda1 | 234 | a.87.1.1 (A:766-999) Rho guanine nucleotide exchan | 6e-35 | |
| d2dfka1 | 203 | a.87.1.1 (A:37-239) Rho guanine nucleotide exchang | 8e-34 | |
| d1foea1 | 206 | a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma in | 1e-32 | |
| d1f5xa_ | 208 | a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [Ta | 4e-30 | |
| d1dbha1 | 207 | a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {H | 1e-29 | |
| d1kz7a1 | 195 | a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse | 5e-29 | |
| d1ntya1 | 184 | a.87.1.1 (A:1231-1414) Triple functional domain pr | 2e-27 | |
| d1t15a1 | 109 | c.15.1.3 (A:1649-1757) Breast cancer associated pr | 3e-06 | |
| d1t15a1 | 109 | c.15.1.3 (A:1649-1757) Breast cancer associated pr | 1e-04 | |
| d1cdza_ | 96 | c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Hom | 4e-06 | |
| d1cdza_ | 96 | c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Hom | 4e-05 | |
| d1in1a_ | 88 | c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sa | 8e-06 | |
| d1t15a2 | 102 | c.15.1.3 (A:1758-1859) Breast cancer associated pr | 2e-05 | |
| d1wf6a_ | 132 | c.15.1.5 (A:) DNA topoisomerase II binding protein | 2e-05 | |
| d1wf6a_ | 132 | c.15.1.5 (A:) DNA topoisomerase II binding protein | 1e-04 | |
| d1l7ba_ | 92 | c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 | 3e-04 |
| >d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]} Length = 209 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: DBL homology domain (DH-domain) superfamily: DBL homology domain (DH-domain) family: DBL homology domain (DH-domain) domain: beta-pix species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (343), Expect = 4e-37
Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 14/214 (6%)
Query: 393 DVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNPLEEKLNTNECILNQAEMKIIFG 452
D S + V + + +TE+ Y L+ ++ + PL+ L+ A + + G
Sbjct: 5 DTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQT-----SEKLSSANISYLMG 59
Query: 453 DLCPIFDTHKDLLKDLKYLEQNYSDSVSIGEVFVKHCTAFKKVYPPFINFFQDSNSLLKE 512
+L I + L++ L+ + +G F+ K +Y + + ++L E
Sbjct: 60 NLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTE 119
Query: 513 KEKNSRFLAFLKLCYMNLRDLGLPEIDKQTLPDLLIRPVQRLGSISLLLNDILKNTSKSS 572
+ + G L L +P RL LL ++ ++
Sbjct: 120 HSEELGE---------FMETKGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYH 170
Query: 573 TDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLF 606
TD Q + +++ + + E ++R++ + +
Sbjct: 171 TDRQDIQKSMAAFKNLSAQCQEVRKRKELELQIL 204
|
| >d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} Length = 228 | Back information, alignment and structure |
|---|
| >d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} Length = 210 | Back information, alignment and structure |
|---|
| >d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 234 | Back information, alignment and structure |
|---|
| >d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 203 | Back information, alignment and structure |
|---|
| >d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 206 | Back information, alignment and structure |
|---|
| >d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} Length = 208 | Back information, alignment and structure |
|---|
| >d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
| >d1kz7a1 a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} Length = 195 | Back information, alignment and structure |
|---|
| >d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Length = 184 | Back information, alignment and structure |
|---|
| >d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 | Back information, alignment and structure |
|---|
| >d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 | Back information, alignment and structure |
|---|
| >d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 96 | Back information, alignment and structure |
|---|
| >d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 96 | Back information, alignment and structure |
|---|
| >d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 88 | Back information, alignment and structure |
|---|
| >d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
| >d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 132 | Back information, alignment and structure |
|---|
| >d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 132 | Back information, alignment and structure |
|---|
| >d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]} Length = 92 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 832 | |||
| d1xcga1 | 228 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 100.0 | |
| d1ki1b1 | 210 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2dfka1 | 203 | Rho guanine nucleotide exchange factor 9, Collybis | 100.0 | |
| d1txda1 | 234 | Rho guanine nucleotide exchange factor 12 {Human ( | 100.0 | |
| d1f5xa_ | 208 | RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} | 100.0 | |
| d1foea1 | 206 | GEF of TIAM1 (T-Lymphoma invasion and metastasis i | 100.0 | |
| d1by1a_ | 209 | beta-pix {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1dbha1 | 207 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 99.97 | |
| d1kz7a1 | 195 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 99.97 | |
| d1ntya1 | 184 | Triple functional domain protein TRIO {Human (Homo | 99.96 | |
| d1wf6a_ | 132 | DNA topoisomerase II binding protein 1, TopBP1 {Hu | 99.61 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 99.6 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 99.57 | |
| d1cdza_ | 96 | DNA-repair protein XRCC1 {Human (Homo sapiens) [Ta | 99.56 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 99.55 | |
| d1wf6a_ | 132 | DNA topoisomerase II binding protein 1, TopBP1 {Hu | 99.5 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 99.5 | |
| d1t15a2 | 102 | Breast cancer associated protein, BRCA1 {Human (Ho | 99.49 | |
| d1t15a1 | 109 | Breast cancer associated protein, BRCA1 {Human (Ho | 99.49 | |
| d1cdza_ | 96 | DNA-repair protein XRCC1 {Human (Homo sapiens) [Ta | 99.47 | |
| d1t15a1 | 109 | Breast cancer associated protein, BRCA1 {Human (Ho | 99.41 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 99.38 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 99.37 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 99.34 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 99.3 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 99.22 | |
| d1t15a2 | 102 | Breast cancer associated protein, BRCA1 {Human (Ho | 99.21 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 99.19 | |
| d1in1a_ | 88 | DNA ligase III alpha {Human (Homo sapiens) [TaxId: | 99.17 | |
| d1l7ba_ | 92 | NAD+-dependent DNA ligase, domain 4 {Thermus therm | 99.08 | |
| d1l7ba_ | 92 | NAD+-dependent DNA ligase, domain 4 {Thermus therm | 99.02 | |
| d1in1a_ | 88 | DNA ligase III alpha {Human (Homo sapiens) [TaxId: | 98.98 | |
| d1kzyc1 | 153 | 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1kzyc1 | 153 | 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1foea2 | 162 | GEF of TIAM1 (T-Lymphoma invasion and metastasis i | 97.73 | |
| d1l0ba2 | 97 | Breast cancer associated protein, BRCA1 {Rat (Ratt | 97.69 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 97.58 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.57 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 97.56 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 97.53 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 97.52 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 97.52 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 97.51 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 97.51 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 97.39 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.37 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 97.32 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 97.32 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 97.25 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.22 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.18 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.16 | |
| d1kzyc2 | 106 | 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | 97.05 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 97.03 | |
| d1l0ba2 | 97 | Breast cancer associated protein, BRCA1 {Rat (Ratt | 96.89 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 96.82 | |
| d1kzyc2 | 106 | 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | 96.62 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 96.56 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 96.48 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 96.4 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 96.2 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 96.19 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 96.11 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 95.93 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 95.73 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 95.69 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 94.82 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 94.81 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 94.81 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 94.77 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 94.68 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 94.62 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 93.96 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 93.77 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 92.65 |
| >d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: DBL homology domain (DH-domain) superfamily: DBL homology domain (DH-domain) family: DBL homology domain (DH-domain) domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-36 Score=309.09 Aligned_cols=220 Identities=24% Similarity=0.386 Sum_probs=207.0
Q ss_pred CCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHhcCHHHHHHHHH
Q psy2293 383 PDNFLATDESDVMIKGNSPRHQVFKELCQTESNYVNVLRVLIEHFKNPLEEKLNTNECILNQAEMKIIFGDLCPIFDTHK 462 (832)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~kRq~vi~ELl~TE~~Yv~~L~~l~~~f~~~L~~~~~~~~~~l~~~~~~~IF~ni~~I~~~h~ 462 (832)
|...++.+++..+++++.|||++|+||++||++|+++|+.+.+.|..|+... +++++.++..||+|+++|+.+|+
T Consensus 3 w~~~~~~~~~~~~~~~e~kRq~vi~ELi~tE~~Yv~~L~~l~~~y~~~l~~~-----~~l~~~~~~~lF~~i~~l~~~h~ 77 (228)
T d1xcga1 3 WQHTVGKDVVAGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKE-----NLMPREELARLFPNLPELIEIHN 77 (228)
T ss_dssp TTTSSSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----TSSCHHHHHHHSSSHHHHHHHHH
T ss_pred chhhcCHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CcCCHHHHHHHhhhHHHHHHHHH
Confidence 3344666778999999999999999999999999999999999999999875 68999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCchHHHHHHhH-----HHHhhhhhHHHhhHHHHHHHHHHHHhc-hHHHHHHHHHHhccccCCCC
Q psy2293 463 DLLKDLKYLEQNYSDSVSIGEVFVKHC-----TAFKKVYPPFINFFQDSNSLLKEKEKN-SRFLAFLKLCYMNLRDLGLP 536 (832)
Q Consensus 463 ~fl~~L~~~~~~~~~~~~Ig~vfl~~~-----~~f~~~Y~~Y~~n~~~a~~~l~~~~~~-~~F~~fl~~~~~~~~~~~~~ 536 (832)
.|+.+|+++..+|.....||++|+.+. ..|.++|..||.+++.+..++..+.+. +.|+.|++.++. .|
T Consensus 78 ~fl~~L~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~~~~~~f~~~l~~~~~------~~ 151 (228)
T d1xcga1 78 SWCEAMKKLREEGPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAES------HP 151 (228)
T ss_dssp HHHHHHHHHHHTCSSCCCCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHT------SG
T ss_pred HHHHHHHHHHhcCCccccHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHhc------Cc
Confidence 999999999999999999999999875 356789999999999999999998766 999999999999 89
Q ss_pred CcCCCChhHHhhhHHHHHhhHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcc
Q psy2293 537 EIDKQTLPDLLIRPVQRLGSISLLLNDILKNTSKSSTDHQKLSEALDGIRTVMTFLNENKQRQDNQRSLFDIYQDIE 613 (832)
Q Consensus 537 ~~~~l~L~slLi~PvQRi~rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~l~~~iNe~~~~~E~~~~l~~l~~~i~ 613 (832)
.|++++|.+||++|+||++||++||++|+++||++||||..|..|++.+++++..||+.++.+|+..++.+++++|+
T Consensus 152 ~~~~~~l~~~l~~P~qRl~rY~llL~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~e~~~~l~~l~~~ld 228 (228)
T d1xcga1 152 QCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLD 228 (228)
T ss_dssp GGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ccccCCHHHHHhhHHHHHhHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875
|
| >d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kz7a1 a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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