Psyllid ID: psy2391
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 642 | 2.2.26 [Sep-21-2011] | |||||||
| Q8Y0Q3 | 640 | Chaperone protein HtpG OS | yes | N/A | 0.973 | 0.976 | 0.617 | 0.0 | |
| Q63W07 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| Q3JUM5 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| A1V292 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| Q62ID1 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| A2S4I0 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| A3MHX8 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.624 | 0.0 | |
| A3N786 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.625 | 0.0 | |
| A3NSX5 | 632 | Chaperone protein HtpG OS | yes | N/A | 0.975 | 0.990 | 0.622 | 0.0 | |
| Q142T5 | 634 | Chaperone protein HtpG OS | yes | N/A | 0.978 | 0.990 | 0.628 | 0.0 |
| >sp|Q8Y0Q3|HTPG_RALSO Chaperone protein HtpG OS=Ralstonia solanacearum (strain GMI1000) GN=htpG PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/635 (61%), Positives = 508/635 (80%), Gaps = 10/635 (1%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+ + FQAEVK +L LMIHSLYSNKEIFLREL+SNASDA+DKLRFE I + + +L
Sbjct: 6 EKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELG 65
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I I FD RT+ I+DNGIGM+R++ I NLGTIA+SGT+EFFS+LSGDQ+KDA+LIGQFG
Sbjct: 66 IRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFG 125
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITLYLRSKE 193
VGFYSAFIVA ++ V+SR P EGV WES G G FT++ I + RGT ITL+LR E
Sbjct: 126 VGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDGEFTVDAIERAERGTTITLHLREGE 185
Query: 194 EEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWARGKS 253
+++LS+W+LKSI++KYSDHIS PI M KE+WDEEKKE +++ +E+E INQASALWAR ++
Sbjct: 186 DDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKE-MVAQDEWETINQASALWARPRA 244
Query: 254 EITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRNGIKL 313
++TDEQYI FY+HI+H+ +PL +THN VEGR+EY QLLY+P+ AP+DLWDR +R+G+KL
Sbjct: 245 DVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWDRERRSGLKL 304
Query: 314 YVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKRILNI 373
YVKRVFIMDDAEQLLP YLRFVKGVIDS +LPLNVSREILQESRDVK IREGSTKR+L +
Sbjct: 305 YVKRVFIMDDAEQLLPAYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGM 364
Query: 374 LEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDIQNVS 433
LE ++ S+D + KYA FW+ FGQV+KEG+GED NK+RI+KLLRFAST+N D Q VS
Sbjct: 365 LESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDEQTVS 424
Query: 434 LMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSFIPKF 493
L DYI RMK+GQ+KIYY++ EN+ + K+ PHLE+F+KK +EVLLLTDRVDEWMLSF+ F
Sbjct: 425 LADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSFLHDF 484
Query: 494 ENKELVSIAKGNLDLGNLENESDKKQQKETETKFQNLIEEMKKILSEKAKDVRVTYRLTD 553
E K LVS+A+G LDLG LE+E+++ + + E +F+ L++ K +L++KAKDVR+T+RLTD
Sbjct: 485 EEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITHRLTD 544
Query: 554 SPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRIQL---------NND 604
SP+CLV DE + SG + R+LK AGQ+ P++KP+LE+NP H L++++ L +
Sbjct: 545 SPSCLVADEGDISGTLARLLKQAGQKAPDTKPVLELNPAHPLVRKLALLESVTGGEADRA 604
Query: 605 NIHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
+ H+LFDQALLAE G L DP ++V+R+N +L
Sbjct: 605 AFEDRLHVLFDQALLAEGGSLADPADYVQRVNRLL 639
|
Molecular chaperone. Has ATPase activity. Ralstonia solanacearum (strain GMI1000) (taxid: 267608) |
| >sp|Q63W07|HTPG_BURPS Chaperone protein HtpG OS=Burkholderia pseudomallei (strain K96243) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q3JUM5|HTPG_BURP1 Chaperone protein HtpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|A1V292|HTPG_BURMS Chaperone protein HtpG OS=Burkholderia mallei (strain SAVP1) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q62ID1|HTPG_BURMA Chaperone protein HtpG OS=Burkholderia mallei (strain ATCC 23344) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|A2S4I0|HTPG_BURM9 Chaperone protein HtpG OS=Burkholderia mallei (strain NCTC 10229) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|A3MHX8|HTPG_BURM7 Chaperone protein HtpG OS=Burkholderia mallei (strain NCTC 10247) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|A3N786|HTPG_BURP6 Chaperone protein HtpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|A3NSX5|HTPG_BURP0 Chaperone protein HtpG OS=Burkholderia pseudomallei (strain 1106a) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q142T5|HTPG_BURXL Chaperone protein HtpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 642 | ||||||
| 340787729 | 665 | chaperone protein [Collimonas fungivoran | 0.990 | 0.956 | 0.725 | 0.0 | |
| 415914672 | 636 | HSP90 family high temperature [Herbaspir | 0.982 | 0.992 | 0.705 | 0.0 | |
| 398832936 | 636 | molecular chaperone of HSP90 family [Her | 0.976 | 0.985 | 0.692 | 0.0 | |
| 399019759 | 637 | molecular chaperone of HSP90 family [Her | 0.978 | 0.985 | 0.720 | 0.0 | |
| 300311127 | 636 | HSP90 family high temperature molecular | 0.982 | 0.992 | 0.705 | 0.0 | |
| 409405621 | 636 | HSP90 family high temperature molecular | 0.982 | 0.992 | 0.704 | 0.0 | |
| 152980556 | 638 | heat shock protein 90 [Janthinobacterium | 0.984 | 0.990 | 0.712 | 0.0 | |
| 134094027 | 642 | heat shock protein 90 [Herminiimonas ars | 0.978 | 0.978 | 0.710 | 0.0 | |
| 427401692 | 639 | chaperone htpG [Massilia timonae CCUG 45 | 0.978 | 0.982 | 0.710 | 0.0 | |
| 395761696 | 639 | heat shock protein 90 [Janthinobacterium | 0.981 | 0.985 | 0.697 | 0.0 |
| >gi|340787729|ref|YP_004753194.1| chaperone protein [Collimonas fungivorans Ter331] gi|340552996|gb|AEK62371.1| Chaperone protein [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/641 (72%), Positives = 549/641 (85%), Gaps = 5/641 (0%)
Query: 4 SEPESIIKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNK 63
+E + +KQTLGFQAEVK +LQLMIHSLYSNKEIFLREL+SNASDA DKLRFE INN
Sbjct: 21 TEETMAVSEKQTLGFQAEVKQLLQLMIHSLYSNKEIFLRELVSNASDAADKLRFEAINNG 80
Query: 64 FISTDNSDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQK 123
+ ++ +L+I + FDK RTI ISDNGIGM+R++ I++LGTIAKSGT+EFFSKLSGDQ+
Sbjct: 81 ALFENDPELKIKVAFDKAARTITISDNGIGMSRDEAISHLGTIAKSGTKEFFSKLSGDQQ 140
Query: 124 KDASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGT 183
KDA+LIGQFGVGFYSAFI+A KI V +R + TEGV WESEG+G+F+IE I+K +RGT
Sbjct: 141 KDAALIGQFGVGFYSAFIIADKITVDTRRAGASATEGVRWESEGAGDFSIEAIDKPSRGT 200
Query: 184 DITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQ 243
DITL+LR E+EYLS+WKLKSIIRKYSDHIS PI M KE WDEEKKETV+ +EFE +NQ
Sbjct: 201 DITLHLREGEDEYLSAWKLKSIIRKYSDHISLPIVMQKEEWDEEKKETVV-KDEFETVNQ 259
Query: 244 ASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLW 303
ASALWAR KS+IT+EQY+EFYKH+SHDFE PL YTHN VEGR+EY QLLY+PSRAP+DLW
Sbjct: 260 ASALWARNKSDITEEQYVEFYKHVSHDFEAPLTYTHNRVEGRSEYTQLLYVPSRAPFDLW 319
Query: 304 DRNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIR 363
DRNKR GIKLYVKRVFIMDDAEQL+P YLRFVKGVIDS++LPLNVSREILQESRDV+VIR
Sbjct: 320 DRNKRGGIKLYVKRVFIMDDAEQLMPVYLRFVKGVIDSSDLPLNVSREILQESRDVRVIR 379
Query: 364 EGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFAST 423
EGSTKR+L +LE+L+ S+D+ + KYA+FWKEFGQV+KEGIGED +NKERI+KLLRFAST
Sbjct: 380 EGSTKRVLGLLEELANSDDQAQKDKYASFWKEFGQVLKEGIGEDASNKERIAKLLRFAST 439
Query: 424 N----NDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLT 479
+ N S+ Q VS DYI RMKEGQ+KIYY TGE + + KNSPHLEIF+KK +EVLLLT
Sbjct: 440 SNADGNGSEAQTVSFADYIGRMKEGQDKIYYATGETFAAAKNSPHLEIFRKKGVEVLLLT 499
Query: 480 DRVDEWMLSFIPKFENKELVSIAKGNLDLGNLENESDKKQQKETETKFQNLIEEMKKILS 539
DRVDEWMLSF+ FE KEL S+AKG LDLG LE+E++KKQ +ETET+F++L+E+MK L+
Sbjct: 500 DRVDEWMLSFLQDFEGKELASVAKGGLDLGTLEDEAEKKQHEETETQFKDLVEKMKGALA 559
Query: 540 EKAKDVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRI 599
+KAKDVRVT+RLTDSPACLV DENE SGN++RMLKAAGQE P+SKPILEINP+H L+QR+
Sbjct: 560 DKAKDVRVTFRLTDSPACLVADENELSGNLLRMLKAAGQEAPDSKPILEINPDHPLVQRL 619
Query: 600 QLNNDNIHNWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
+ +WSHILFDQALLAE G L DP FVKRLNEMLL
Sbjct: 620 KYEEAKFGDWSHILFDQALLAEGGALADPAGFVKRLNEMLL 660
|
Source: Collimonas fungivorans Ter331 Species: Collimonas fungivorans Genus: Collimonas Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|415914672|ref|ZP_11553775.1| HSP90 family high temperature [Herbaspirillum frisingense GSF30] gi|407761785|gb|EKF70775.1| HSP90 family high temperature [Herbaspirillum frisingense GSF30] | Back alignment and taxonomy information |
|---|
| >gi|398832936|ref|ZP_10591083.1| molecular chaperone of HSP90 family [Herbaspirillum sp. YR522] gi|398222432|gb|EJN08807.1| molecular chaperone of HSP90 family [Herbaspirillum sp. YR522] | Back alignment and taxonomy information |
|---|
| >gi|399019759|ref|ZP_10721905.1| molecular chaperone of HSP90 family [Herbaspirillum sp. CF444] gi|398097650|gb|EJL87954.1| molecular chaperone of HSP90 family [Herbaspirillum sp. CF444] | Back alignment and taxonomy information |
|---|
| >gi|300311127|ref|YP_003775219.1| HSP90 family high temperature molecular chaperone G protein [Herbaspirillum seropedicae SmR1] gi|124483510|emb|CAM32628.1| HSP90 family high temperature [Herbaspirillum seropedicae] gi|300073912|gb|ADJ63311.1| HSP90 family high temperature molecular chaperone G protein [Herbaspirillum seropedicae SmR1] | Back alignment and taxonomy information |
|---|
| >gi|409405621|ref|ZP_11254083.1| HSP90 family high temperature molecular chaperone G protein [Herbaspirillum sp. GW103] gi|386434170|gb|EIJ46995.1| HSP90 family high temperature molecular chaperone G protein [Herbaspirillum sp. GW103] | Back alignment and taxonomy information |
|---|
| >gi|152980556|ref|YP_001352387.1| heat shock protein 90 [Janthinobacterium sp. Marseille] gi|151280633|gb|ABR89043.1| molecular chaperone HtpG (Hsp90) [Janthinobacterium sp. Marseille] | Back alignment and taxonomy information |
|---|
| >gi|134094027|ref|YP_001099102.1| heat shock protein 90 [Herminiimonas arsenicoxydans] gi|133737930|emb|CAL60975.1| Chaperone protein htpG (Heat shock protein htpG) (High temperature protein G) (Heat shock protein C62.5) [Herminiimonas arsenicoxydans] | Back alignment and taxonomy information |
|---|
| >gi|427401692|ref|ZP_18892764.1| chaperone htpG [Massilia timonae CCUG 45783] gi|425719404|gb|EKU82337.1| chaperone htpG [Massilia timonae CCUG 45783] | Back alignment and taxonomy information |
|---|
| >gi|395761696|ref|ZP_10442365.1| heat shock protein 90 [Janthinobacterium lividum PAMC 25724] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 642 | ||||||
| TIGR_CMR|CBU_0309 | 633 | CBU_0309 "heat shock protein H | 0.971 | 0.985 | 0.563 | 1.8e-188 | |
| UNIPROTKB|Q4KFX8 | 634 | htpG "Chaperone protein HtpG" | 0.976 | 0.988 | 0.549 | 2.7e-187 | |
| UNIPROTKB|P22359 | 635 | htpG "Chaperone protein HtpG" | 0.976 | 0.987 | 0.525 | 8.5e-184 | |
| TIGR_CMR|VC_0985 | 635 | VC_0985 "heat shock protein Ht | 0.976 | 0.987 | 0.525 | 8.5e-184 | |
| UNIPROTKB|P0A6Z3 | 624 | htpG [Escherichia coli K-12 (t | 0.967 | 0.995 | 0.540 | 1.2e-182 | |
| TIGR_CMR|SO_2016 | 637 | SO_2016 "heat shock protein Ht | 0.976 | 0.984 | 0.532 | 3.3e-182 | |
| TIGR_CMR|CPS_3901 | 653 | CPS_3901 "chaperone protein Ht | 0.970 | 0.954 | 0.515 | 8.7e-182 | |
| TIGR_CMR|GSU_2390 | 650 | GSU_2390 "heat shock protein H | 0.962 | 0.950 | 0.442 | 2.6e-141 | |
| UNIPROTKB|P64411 | 647 | htpG "Chaperone protein HtpG" | 0.957 | 0.950 | 0.440 | 6.3e-140 | |
| TAIR|locus:2161790 | 699 | HSP81-3 "heat shock protein 81 | 0.638 | 0.586 | 0.393 | 4.2e-130 |
| TIGR_CMR|CBU_0309 CBU_0309 "heat shock protein HtpG" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 1827 (648.2 bits), Expect = 1.8e-188, P = 1.8e-188
Identities = 360/639 (56%), Positives = 473/639 (74%)
Query: 8 SIIKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFIST 67
S+ + +TL F+AEVK +L L+ HSLYSNKEIFLRELISN+SDA DKLR++ +++ +
Sbjct: 2 SLQPQAETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYE 61
Query: 68 DNSDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS 127
+++DL+I I FDKDNRTI I DNGIGM+R ++I NLGTIAKSGT+ F L+ + +D+
Sbjct: 62 NDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLAEKKAEDSQ 121
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITL 187
LIGQFGVGFYSAFIVA +++V++R +GV WES G G +T++ I+K RGT++ L
Sbjct: 122 LIGQFGVGFYSAFIVADRVVVRTRRAGMKADQGVEWESTGEGEYTLKNIDKPTRGTEVVL 181
Query: 188 YLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMYK-ETW---DEEKKETVISNNEFEVINQ 243
+L+ EEE+L +L++II KYSDHI PI M K +T DE+K ET E EV+N+
Sbjct: 182 HLKESEEEFLDPLRLRAIITKYSDHILLPIVMKKIKTSGADDEDKNETP----EEEVVNR 237
Query: 244 ASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLW 303
A+ALW K +I DE+Y E YKHI+HDFE PL + HN VEG+ EY LLYIP+RAP+DLW
Sbjct: 238 ANALWVLPKDKIKDEEYKELYKHIAHDFEDPLAWVHNKVEGKLEYTTLLYIPARAPFDLW 297
Query: 304 DRNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIR 363
+R + G+KLYVKR+FIMDDAE +P YLRFVKG++DSN+LPLN+SRE+LQ + + I+
Sbjct: 298 NREGQRGLKLYVKRIFIMDDAEHFMPMYLRFVKGIVDSNDLPLNISRELLQSNEVINKIK 357
Query: 364 EGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFAST 423
G KRIL++LEDL+ NDKEK YA+FWK FGQV+KEG ED N++RI+ LLRFAST
Sbjct: 358 AGCVKRILSLLEDLA-KNDKEK---YASFWKAFGQVLKEGPAEDFANRDRIANLLRFAST 413
Query: 424 NNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVD 483
+ND+D QNVSL DYI RMK QNKIYYI + Y S KNSP LE+F+KK IEVLL++DRVD
Sbjct: 414 HNDTDEQNVSLQDYISRMKPEQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVD 473
Query: 484 EWMLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAK 543
EW+++ + +FE K L SIAKG LDLG+LE E + F L+++ K++L EK K
Sbjct: 474 EWLVAHLNEFEGKSLQSIAKGTLDLGDLEKE-EKVETEKFEKDFDELLKQFKEVLGEKIK 532
Query: 544 DVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRIQLNN 603
DVR+T+RLTDSP C+V DENE SG++ R+L GQ+ +KPILEINP+H LI R++ +
Sbjct: 533 DVRITHRLTDSPTCVVFDENEMSGHLQRLLIQTGQDFMQAKPILEINPSHPLILRVKNES 592
Query: 604 DN--IHNWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
D + W+ +L +QALLAE L DP +FVK LNE+LL
Sbjct: 593 DKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELLL 631
|
|
| UNIPROTKB|Q4KFX8 htpG "Chaperone protein HtpG" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P22359 htpG "Chaperone protein HtpG" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_0985 VC_0985 "heat shock protein HtpG" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P0A6Z3 htpG [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SO_2016 SO_2016 "heat shock protein HtpG" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CPS_3901 CPS_3901 "chaperone protein HtpG" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_2390 GSU_2390 "heat shock protein HtpG" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P64411 htpG "Chaperone protein HtpG" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2161790 HSP81-3 "heat shock protein 81-3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5P1C5 | HTPG_AROAE | No assigned EC number | 0.6038 | 0.9750 | 0.9660 | yes | N/A |
| A1W3A1 | HTPG_ACISJ | No assigned EC number | 0.5661 | 0.9719 | 0.96 | yes | N/A |
| A2S4I0 | HTPG_BURM9 | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| B5EQZ5 | HTPG_ACIF5 | No assigned EC number | 0.5590 | 0.9688 | 0.9888 | yes | N/A |
| Q62ID1 | HTPG_BURMA | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| Q9I3C5 | HTPG_PSEAE | No assigned EC number | 0.5622 | 0.9766 | 0.9889 | yes | N/A |
| Q2KYY2 | HTPG_BORA1 | No assigned EC number | 0.6194 | 0.9657 | 0.9841 | yes | N/A |
| Q3IKQ2 | HTPG_PSEHT | No assigned EC number | 0.5543 | 0.9704 | 0.9780 | yes | N/A |
| Q2SZZ0 | HTPG_BURTA | No assigned EC number | 0.6178 | 0.9750 | 0.9905 | yes | N/A |
| Q1LKE3 | HTPG_RALME | No assigned EC number | 0.5971 | 0.9735 | 0.9873 | yes | N/A |
| Q3KFT8 | HTPG_PSEPF | No assigned EC number | 0.5559 | 0.9766 | 0.9889 | yes | N/A |
| Q142T5 | HTPG_BURXL | No assigned EC number | 0.6285 | 0.9781 | 0.9905 | yes | N/A |
| Q82TV8 | HTPG_NITEU | No assigned EC number | 0.6176 | 0.9719 | 0.975 | yes | N/A |
| A4XV81 | HTPG_PSEMY | No assigned EC number | 0.5496 | 0.9766 | 0.9889 | yes | N/A |
| A3MHX8 | HTPG_BURM7 | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| Q7W0M8 | HTPG_BORPE | No assigned EC number | 0.6146 | 0.9688 | 0.9795 | yes | N/A |
| Q46YS9 | HTPG_CUPPJ | No assigned EC number | 0.6178 | 0.9735 | 0.9873 | yes | N/A |
| Q3JUM5 | HTPG_BURP1 | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| A1V292 | HTPG_BURMS | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| Q63W07 | HTPG_BURPS | No assigned EC number | 0.6242 | 0.9750 | 0.9905 | yes | N/A |
| A0K9C0 | HTPG_BURCH | No assigned EC number | 0.6236 | 0.9735 | 0.9889 | yes | N/A |
| Q1H2K2 | HTPG_METFK | No assigned EC number | 0.6174 | 0.9641 | 0.9856 | yes | N/A |
| Q8Y0Q3 | HTPG_RALSO | No assigned EC number | 0.6173 | 0.9735 | 0.9765 | yes | N/A |
| Q4ZUW2 | HTPG_PSEU2 | No assigned EC number | 0.5527 | 0.9781 | 0.9889 | yes | N/A |
| Q7NYF6 | HTPG_CHRVO | No assigned EC number | 0.5879 | 0.9688 | 0.9857 | yes | N/A |
| Q60AK3 | HTPG_METCA | No assigned EC number | 0.5582 | 0.9657 | 0.9779 | yes | N/A |
| B3R5J8 | HTPG_CUPTR | No assigned EC number | 0.6146 | 0.9735 | 0.9873 | yes | N/A |
| Q0K8D7 | HTPG_CUPNH | No assigned EC number | 0.6130 | 0.9735 | 0.9873 | yes | N/A |
| A3N786 | HTPG_BURP6 | No assigned EC number | 0.6257 | 0.9750 | 0.9905 | yes | N/A |
| B7JAR2 | HTPG_ACIF2 | No assigned EC number | 0.5590 | 0.9688 | 0.9888 | yes | N/A |
| Q3SJW8 | HTPG_THIDA | No assigned EC number | 0.6022 | 0.9766 | 0.9905 | yes | N/A |
| Q47GZ8 | HTPG_DECAR | No assigned EC number | 0.6091 | 0.9813 | 0.9905 | yes | N/A |
| A4SLY0 | HTPG_AERS4 | No assigned EC number | 0.5601 | 0.9704 | 0.9780 | yes | N/A |
| Q21IX0 | HTPG_SACD2 | No assigned EC number | 0.5580 | 0.9688 | 0.9795 | yes | N/A |
| Q0AHI5 | HTPG_NITEC | No assigned EC number | 0.6096 | 0.9719 | 0.975 | yes | N/A |
| Q39E36 | HTPG_BURS3 | No assigned EC number | 0.6220 | 0.9735 | 0.9889 | yes | N/A |
| A3NSX5 | HTPG_BURP0 | No assigned EC number | 0.6226 | 0.9750 | 0.9905 | yes | N/A |
| A1WF62 | HTPG_VEREI | No assigned EC number | 0.5550 | 0.9735 | 0.9441 | yes | N/A |
| Q3JAF6 | HTPG_NITOC | No assigned EC number | 0.5748 | 0.9766 | 0.9889 | yes | N/A |
| A0KL53 | HTPG_AERHH | No assigned EC number | 0.5566 | 0.9704 | 0.9719 | yes | N/A |
| Q0BD34 | HTPG_BURCM | No assigned EC number | 0.6251 | 0.9735 | 0.9889 | yes | N/A |
| Q2YA09 | HTPG_NITMU | No assigned EC number | 0.6050 | 0.9766 | 0.9812 | yes | N/A |
| Q5QWR2 | HTPG_IDILO | No assigned EC number | 0.5500 | 0.9657 | 0.9733 | yes | N/A |
| Q7WQ31 | HTPG_BORBR | No assigned EC number | 0.6162 | 0.9688 | 0.9795 | yes | N/A |
| Q15RT6 | HTPG_PSEA6 | No assigned EC number | 0.5588 | 0.9766 | 0.9796 | yes | N/A |
| Q12FW8 | HTPG_POLSJ | No assigned EC number | 0.5553 | 0.9657 | 0.9904 | yes | N/A |
| A2SKM5 | HTPG_METPP | No assigned EC number | 0.5939 | 0.9704 | 0.9968 | yes | N/A |
| Q1BUR7 | HTPG_BURCA | No assigned EC number | 0.6236 | 0.9735 | 0.9889 | yes | N/A |
| Q7WC32 | HTPG_BORPA | No assigned EC number | 0.6146 | 0.9688 | 0.9795 | yes | N/A |
| A6V7J7 | HTPG_PSEA7 | No assigned EC number | 0.5606 | 0.9766 | 0.9889 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 642 | |||
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 1e-151 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 1e-121 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-105 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 5e-34 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 6e-08 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 2e-07 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 4e-07 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 2e-05 |
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
Score = 955 bits (2472), Expect = 0.0
Identities = 371/631 (58%), Positives = 479/631 (75%), Gaps = 25/631 (3%)
Query: 12 KKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSD 71
+T FQAEVK +L LMIHSLYSNKEIFLRELISNASDA+DKLRFE + + + + D
Sbjct: 2 AMETGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGD 61
Query: 72 LEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQ 131
L+I I+FDK+ RT+ ISDNGIGM R ++I NLGTIAKSGT+EF KL GDQKKD+ LIGQ
Sbjct: 62 LKIRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEFLEKLKGDQKKDSQLIGQ 121
Query: 132 FGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITLYLRS 191
FGVGFYSAF+VA K+ V +R E V WES+G G +TIE I K RGT+ITL+L+
Sbjct: 122 FGVGFYSAFMVADKVTVITRSAGPA-AEAVRWESDGEGEYTIEEIEKEERGTEITLHLKE 180
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWARG 251
E+E+L W+++SII+KYSD I PIK+ KE E IN ASALW R
Sbjct: 181 DEDEFLDEWRIRSIIKKYSDFIPVPIKLEKEEE--------------ETINSASALWTRS 226
Query: 252 KSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRNGI 311
KSEITDE+Y EFYKH++HDF+ PL + HN+VEG EY LLYIP +AP+DL++R+++ G+
Sbjct: 227 KSEITDEEYKEFYKHLAHDFDDPLFWIHNNVEGPFEYTGLLYIPKKAPFDLFNRDRKGGL 286
Query: 312 KLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKRIL 371
KLYVKRVFIMDDAE+LLP YLRFVKGVIDS +LPLNVSREILQE R VK IR+ TK++L
Sbjct: 287 KLYVKRVFIMDDAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVL 346
Query: 372 NILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDIQN 431
+ LE L+ ND+E KY FWKEFG V+KEG+ ED N+E+++KLLRFAST+ +
Sbjct: 347 DELEKLAK-NDRE---KYEKFWKEFGPVLKEGLYEDFANREKLAKLLRFASTHEG---KY 399
Query: 432 VSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSFIP 491
VSL +Y++RMKEGQ KIYYITG++ ++ KNSPHLE+F+KK IEVLLLTD +DE+ +S++
Sbjct: 400 VSLAEYVERMKEGQKKIYYITGDSREAAKNSPHLELFKKKGIEVLLLTDPIDEFWISYLE 459
Query: 492 KFENKELVSIAKGNLDLGNLENESDKKQQKETETKFQNLIEEMKKILSEKAKDVRVTYRL 551
+F+ K S+A+G+LDLG E+E +K++++E E +F+ L+E +K+ L +K KDVR+++RL
Sbjct: 460 EFDGKPFKSVARGDLDLGK-EDEEEKEEKEEAEEEFKPLLERLKEALGDKVKDVRLSHRL 518
Query: 552 TDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRI--QLNNDNIHNW 609
TDSPACLV DE + S M ++LKAAGQE P SKPILEINPNH L++++ + + +
Sbjct: 519 TDSPACLVADEGDMSTQMEKLLKAAGQEVPESKPILEINPNHPLVKKLADEADEAKFKDL 578
Query: 610 SHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
+ +L+DQALLAE G L DP FVKRLNE+LL
Sbjct: 579 AELLYDQALLAEGGSLEDPAAFVKRLNELLL 609
|
Length = 613 |
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 642 | |||
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| KOG0019|consensus | 656 | 100.0 | ||
| KOG0020|consensus | 785 | 100.0 | ||
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 99.95 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.88 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.87 | |
| KOG1979|consensus | 694 | 99.71 | ||
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.67 | |
| KOG1978|consensus | 672 | 99.53 | ||
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 99.32 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 99.31 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.3 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.24 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 99.22 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 99.0 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.98 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.97 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 98.79 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 98.7 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 98.47 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.43 | |
| KOG1977|consensus | 1142 | 98.25 | ||
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.46 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 97.41 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 97.25 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 97.16 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 97.12 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 97.1 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 97.1 | |
| cd03483 | 127 | MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain | 97.09 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 97.09 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 97.08 | |
| cd03482 | 123 | MutL_Trans_MutL MutL_Trans_MutL: transducer domain | 97.0 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.98 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.94 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 96.92 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 96.88 | |
| PF01119 | 119 | DNA_mis_repair: DNA mismatch repair protein, C-ter | 96.85 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.8 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.78 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.77 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 96.75 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.72 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 96.68 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.68 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.67 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 96.66 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 96.62 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 96.6 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.59 | |
| cd03485 | 132 | MutL_Trans_hPMS_1_like MutL_Trans_hPMS1_like: tran | 96.56 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 96.52 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 96.44 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 96.38 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 96.38 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.34 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 96.3 | |
| cd00782 | 122 | MutL_Trans MutL_Trans: transducer domain, having a | 96.24 | |
| cd03484 | 142 | MutL_Trans_hPMS_2_like MutL_Trans_hPMS2_like: tran | 96.2 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 96.2 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 96.18 | |
| cd03486 | 141 | MutL_Trans_MLH3 MutL_Trans_MLH3: transducer domain | 96.15 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 95.97 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 95.95 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 95.88 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 95.84 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 95.6 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 95.55 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 95.49 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 95.44 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 95.4 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 95.39 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 95.26 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 94.84 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 94.7 | |
| PRK13557 | 540 | histidine kinase; Provisional | 94.69 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 94.64 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 94.57 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 93.81 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 93.47 | |
| KOG0787|consensus | 414 | 92.74 | ||
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 92.37 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 91.87 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 91.71 | |
| cd00329 | 107 | TopoII_MutL_Trans MutL_Trans: transducer domain, h | 90.99 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 90.86 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 90.75 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 90.7 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 90.46 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 89.21 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 87.77 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 86.46 | |
| COG4192 | 673 | Signal transduction histidine kinase regulating ph | 84.38 | |
| COG5002 | 459 | VicK Signal transduction histidine kinase [Signal | 83.14 | |
| COG2972 | 456 | Predicted signal transduction protein with a C-ter | 82.74 | |
| KOG0355|consensus | 842 | 81.62 | ||
| PRK10935 | 565 | nitrate/nitrite sensor protein NarQ; Provisional | 81.04 | |
| KOG1845|consensus | 775 | 80.49 |
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-158 Score=1294.50 Aligned_cols=614 Identities=58% Similarity=0.974 Sum_probs=580.2
Q ss_pred cccccceeeehhHHHHHHHHhcCCCchhHHHHHHhcHHHHhHhhhhhhhcccccCCCCCCceEEEEEcCCCCEEEEEeCC
Q psy2391 12 KKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEIIITFDKDNRTINISDNG 91 (642)
Q Consensus 12 ~~~~~~F~~e~~~ll~ll~~~LYs~~~i~lRELIqNA~DA~~~~~~~~~~~~~~~~~~~~~~I~I~~d~~~~~i~I~DnG 91 (642)
..+++.||+|+++||++|+|||||+++||||||||||+|||+|+|+++++++.......+++|+|.+|+++++|+|.|||
T Consensus 3 ~~e~~~Fq~ev~~ll~lmihSlYSnKeIFLRELISNAsDAidKlr~~al~~~~~~~~~~~~~I~i~~Dk~~kTLtI~DNG 82 (623)
T COG0326 3 EQETRGFQAEVKQLLDLMIHSLYSNKEIFLRELISNASDAIDKLRFEALSDPELGEGDSDLRIRISFDKDNKTLTISDNG 82 (623)
T ss_pred chhhhhhhHHHHHHHHHHHHhccCCcHHHHHHHHhhhHHHHHHHHHHhccCccccCCCCCceEEEEEcccCCEEEEEeCC
Confidence 45789999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccchhhHhhhhcCccccccccccccchhhhhhcccCEEEEEeecCCCCCCceEEEEEeCCcce
Q psy2391 92 IGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNF 171 (642)
Q Consensus 92 iGMt~~el~~~l~~ia~Sg~~~f~~~~~~~~~~~~~~iG~fGiGf~S~f~v~~~v~V~Sr~~~~~~~~~~~w~~~~~~~~ 171 (642)
||||++|+.++|||||+|||++|++++.+++ ++..+||||||||||||||||+|+|+||+++ .+.++.|+|+|+|.|
T Consensus 83 IGMT~~Ev~~~LgTIAkSgT~~F~~~l~~~~-~~~~lIGQFGVGFYSaFmVAdkV~V~T~~~~--~~~~~~W~S~g~g~y 159 (623)
T COG0326 83 IGMTKDEVIENLGTIAKSGTKEFLESLSEDQ-KDSDLIGQFGVGFYSAFMVADKVTVITRSAG--EDEAYHWESDGEGEY 159 (623)
T ss_pred CCCCHHHHHHHHHHhhhccHHHHHHHhcccc-ccccccccccchhhheeeeeeeEEEEeccCC--CCcceEEEEcCCCce
Confidence 9999999999999999999999999998765 6899999999999999999999999999998 788889999999999
Q ss_pred EEEecCCCCC-ccEEEEEecCchhhccCHHHHHHHHHHhhccCCCCeEeeeccccccccccccccCceEEeecCcccccc
Q psy2391 172 TIETINKTNR-GTDITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWAR 250 (642)
Q Consensus 172 ~v~~~~~~~~-GT~I~l~lk~~~~e~~~~~~i~~~i~~ys~~l~~pI~~~~~~~~~~g~~~~~~~~~~~~~n~~~~iw~~ 250 (642)
+|++++..++ ||+|+|||+++..+|+++|+|+++|++||.|+++||++..++.. ++ ...+|+.+|..+|+|++
T Consensus 160 tv~~~~~~~~~GT~I~L~Lk~~e~efl~~~rl~~ivkkYSd~i~~PI~~~~~~~~-~~-----~~~~~e~iN~~~alW~r 233 (623)
T COG0326 160 TVEDIDKEPRRGTEITLHLKEEEDEFLEEWRLREIVKKYSDHIAYPIYIEGEKEK-DE-----EVIEWETINKAKALWTR 233 (623)
T ss_pred EEeeccCCCCCCcEEEEEECCchHHHhhhhHHHHHHHHHhcccccceEEeeeccc-cc-----cchhHHHhccccCcccC
Confidence 9999988785 99999999999999999999999999999999999999653211 11 13578999999999999
Q ss_pred CCCCCCHHHHHHHHhhhccCCCCCceeeecccccceEEEEEEEeeCCCCCCccccccCCccEEEEcceeeecCCCchhhh
Q psy2391 251 GKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRNGIKLYVKRVFIMDDAEQLLPT 330 (642)
Q Consensus 251 ~~~~~~~e~~~~fy~~~~~~~~~~l~~~~~~~eg~~~~~gll~iP~~~p~~~~~~~~~~~~~lyv~~v~i~d~~~~llP~ 330 (642)
+++++++++|.+||++++++|++||.|+|+++||.++++++||||+.+||++|++..++|++||||||||+|+|++|||.
T Consensus 234 ~ksei~~eeY~eFYk~~~~d~~~Pl~~~h~~~EG~~ey~~ll~iP~~aPfdl~~~~~k~glkLYv~rVfI~Dd~~~llP~ 313 (623)
T COG0326 234 NKSEITDEEYKEFYKHLAHDFDDPLLWIHNKVEGRLEYTALLFIPSKAPFDLFRRDRKRGLKLYVNRVFIMDDAEDLLPN 313 (623)
T ss_pred ChhhCChHHHHHHHHHhhcccCCCeEEEecccccceEEEEEEEccCCCCcccccccccCCcEEEEeeeEEeCChhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred hhhceeeeecCCCCCCccchhhhccChhHHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcccCCcch
Q psy2391 331 YLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNN 410 (642)
Q Consensus 331 ~l~Fv~Gvvds~dl~lNvSRE~lq~~~~l~~i~~~l~~~i~~~l~~la~~~~~e~~~~y~~f~~~~~~~lK~g~~~D~~~ 410 (642)
||+||+|||||+|||||||||+||+|++++.||++|++|++++|++||++ +|| +|.+||++||.+||+|+++|.+|
T Consensus 314 yl~Fv~GvIDS~DLpLNvSRE~LQ~n~~l~~Irk~l~kkvl~~L~~La~~-~~e---~y~~f~~~fg~~LKeG~~eD~~n 389 (623)
T COG0326 314 YLRFVRGVIDSEDLPLNVSREILQQNRILAAIRKALTKKVLSMLEKLAKD-DPE---KYRKFWKQFGLVLKEGLYEDFEN 389 (623)
T ss_pred HHhhheeeeecCCCCcccCHHHHccCHHHHHHHHHHHHHHHHHHHHHHhc-CHH---HHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999 999 99999999999999999999999
Q ss_pred HHHhcccceeeecCCCCCCCcccHHHHHHhhhcCCCeEEEEEcCCHhhHhcCcchHHHHhcCCEEEEeCCCchhHHhhcc
Q psy2391 411 KERISKLLRFASTNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSFI 490 (642)
Q Consensus 411 ~~~~~~ll~f~ts~~~~~~~~~sL~eY~~rm~~~q~~Iyy~~~~~~~~~~~sp~lE~~~~kg~eVL~l~d~iDe~~l~~l 490 (642)
++++++||||.||... ..+++||+||++||+++|+.|||++|++..++.+||++|.|++||||||+|+|+||++++..+
T Consensus 390 ~e~l~~lLrf~St~~~-~~~~~sl~eYv~rmke~q~~IyY~tges~~~~~~sP~lE~~k~kgieVL~l~d~iDe~~l~~~ 468 (623)
T COG0326 390 KEKLLDLLRFRSTSDS-GEKTVSLEEYVSRMKEGQKQIYYITGESYQAAKGSPHLELFKAKGIEVLLLTDRIDEFMLTML 468 (623)
T ss_pred HHHHHhhhEecccCCC-ccCcccHHHHHHhcccccceeEEeccccHHHHhcCchHHHHHhcCcEEEecCccchHHHhhhh
Confidence 9999999999996432 237899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcceEEeecCCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHhcccceEEEEeecCCCCCeEEEecCCCcchhHH
Q psy2391 491 PKFENKELVSIAKGNLDLGNLENESDKKQQKETETKFQNLIEEMKKILSEKAKDVRVTYRLTDSPACLVVDENEPSGNMI 570 (642)
Q Consensus 491 ~~~~~~~f~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~k~~L~~~v~~V~vs~rL~~sPa~~v~~e~~~s~~m~ 570 (642)
.+|+|++|++|++++++++.+.++. +...++.+.++++|++++|+.|+++|.+|++|+||+++|||++++..+++.+|+
T Consensus 469 ~e~egk~~~~i~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~k~~L~~~vk~Vr~s~rl~dspa~l~~~~~~~~~~m~ 547 (623)
T COG0326 469 PEFEGKPFKSITKGDLDLELLEEED-EADSEEEKKEFKPLLERVKEILGDKVKDVRLSHRLTDSPACLTTDGADLSTQME 547 (623)
T ss_pred hhccCCcceeeccccccccccchhh-hhhhHHHHHHHHHHHHHHHHHhcCccceeEeecccCCCcceeecCccchhHHHH
Confidence 9999999999999998877654432 223456677899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCCCceEEEcCCCHHHHHHhh--CcccHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHhc
Q psy2391 571 RMLKAAGQETPNSKPILEINPNHALIQRIQL--NNDNIHNWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640 (642)
Q Consensus 571 r~m~~~~~~~~~~k~~LEINp~HplIkkL~~--~~~~~~~~~~~Lyd~All~~G~~l~d~~~f~~r~~~ll~ 640 (642)
|+|++|++..+..++||||||+||||++|.. |...++++|++|||+|||++|++++||..|++|+|++|.
T Consensus 548 r~l~~~~~~~~~~k~ilEiNp~h~lv~~L~~~~d~~~~~~~~~llydqAll~eg~~~~dp~~F~~rln~ll~ 619 (623)
T COG0326 548 RLLKAQGQEVPESKKILEINPNHPLVKKLASLEDEASVADLVELLYDQALLAEGGPLEDPAAFIERLNDLLS 619 (623)
T ss_pred HHHHhccccCCccccceeeCcccHHHHHHHhcccHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence 9999999988889999999999999999998 677799999999999999999999999999999999985
|
|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >KOG0019|consensus | Back alignment and domain information |
|---|
| >KOG0020|consensus | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >KOG1979|consensus | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >KOG1978|consensus | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >KOG1977|consensus | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1) | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >cd03482 MutL_Trans_MutL MutL_Trans_MutL: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to Escherichia coli MutL | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF01119 DNA_mis_repair: DNA mismatch repair protein, C-terminal domain; InterPro: IPR013507 This entry represents the C-terminal domain of DNA mismatch repair proteins, such as MutL | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >cd03485 MutL_Trans_hPMS_1_like MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2 | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >cd00782 MutL_Trans MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-terminal domain of DNA mismatch repair (MutL/MLH1/PMS2) family | Back alignment and domain information |
|---|
| >cd03484 MutL_Trans_hPMS_2_like MutL_Trans_hPMS2_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM2 (hPSM2) | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >cd03486 MutL_Trans_MLH3 MutL_Trans_MLH3: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH3 (MutL homologue 3) | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >KOG0787|consensus | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd00329 TopoII_MutL_Trans MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-terminal domain of type II DNA topoisomerases (Topo II) and DNA mismatch repair (MutL/MLH1/PMS2) proteins | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0355|consensus | Back alignment and domain information |
|---|
| >PRK10935 nitrate/nitrite sensor protein NarQ; Provisional | Back alignment and domain information |
|---|
| >KOG1845|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 642 | ||||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 0.0 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 0.0 | ||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-122 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-121 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-107 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 1e-94 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 2e-74 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 7e-73 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 7e-73 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 4e-71 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 6e-71 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 3e-61 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 4e-61 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 5e-61 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 5e-57 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 8e-50 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 2e-49 | ||
| 3k60_A | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 9e-49 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 3e-48 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 4e-48 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 5e-48 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 5e-48 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 5e-48 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 6e-48 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 6e-48 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 6e-48 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 6e-48 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 6e-48 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 7e-48 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 7e-48 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 7e-48 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 8e-48 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 8e-48 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 8e-48 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 8e-48 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 8e-48 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 8e-48 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 9e-48 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 9e-48 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 9e-48 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 1e-47 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 1e-47 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 1e-47 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 1e-47 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 2e-47 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 2e-47 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 2e-47 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 2e-47 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 2e-47 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 2e-47 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 2e-47 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 3e-47 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 3e-47 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 4e-47 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 4e-47 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 5e-47 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 3e-46 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 3e-46 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 7e-46 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 1e-45 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 1e-45 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 2e-45 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 5e-45 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 3e-44 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 5e-44 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 5e-44 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 5e-44 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 7e-44 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 7e-44 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 8e-44 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 8e-44 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 1e-43 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 1e-43 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 2e-43 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 4e-43 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 4e-43 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 1e-42 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 6e-42 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 2e-41 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 2e-39 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 5e-38 | ||
| 1sf8_A | 126 | Crystal Structure Of The Carboxy-terminal Domain Of | 8e-22 |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
|
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|1SF8|A Chain A, Crystal Structure Of The Carboxy-terminal Domain Of Htpg, The E. Coli Hsp90 Length = 126 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
Score = 953 bits (2466), Expect = 0.0
Identities = 338/633 (53%), Positives = 455/633 (71%), Gaps = 12/633 (1%)
Query: 10 IKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDN 69
+K ++T GFQ+EVK +L LMIHSLYSNKEIFLRELISNASDA DKLRF ++N + +
Sbjct: 1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD 60
Query: 70 SDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLI 129
+L + ++FDKD RT+ ISDNG+GM R+++I +LGTIAKSGT+ F L DQ KD+ LI
Sbjct: 61 GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI 120
Query: 130 GQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITLYL 189
GQFGVGFYSAFIVA K+ V++R GV WES G G +T+ I K +RGT+ITL+L
Sbjct: 121 GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL 180
Query: 190 RSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWA 249
R E+E+L W+++SII KYSDHI+ P+++ K + + +E IN+A ALW
Sbjct: 181 REGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVI-----SWEKINKAQALWT 235
Query: 250 RGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRN 309
R KSEITDE+Y EFYKHI+HDF PL ++HN VEG+ EY LLYIPS+AP+D+W+R+ ++
Sbjct: 236 RNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKH 295
Query: 310 GIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKR 369
G+KLYV+RVFIMDDAEQ +P YLRFV+G+IDS++LPLNVSREILQ+S + +R TKR
Sbjct: 296 GLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKR 355
Query: 370 ILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDI 429
+L +LE L+ +D E KY FW++FG V+KEG ED N+E I+KLLRFAST+ DS
Sbjct: 356 VLQMLEKLAK-DDAE---KYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSA 411
Query: 430 QNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSF 489
Q VSL DY+ RMKEGQ KIYYIT ++Y + K+SPHLE+ +KK IEVLLL+DR+DEWM+++
Sbjct: 412 QTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNY 471
Query: 490 IPKFENKELVSIAKGNLDLGNLENESDKKQQKETETKFQNLIEEMKKILSEKAKDVRVTY 549
+ +F+ K S++K + L L +E + KE E I+ +K +L E+ KDVR+T+
Sbjct: 472 LTEFDGKPFQSVSKVDESLEKLADE-VDESAKEAEKALTPFIDRVKALLGERVKDVRLTH 530
Query: 550 RLTDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRIQLNNDN--IH 607
RLTD+PA + D +E S M ++ AAGQ+ P K I E+NP+H L++R D
Sbjct: 531 RLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFS 590
Query: 608 NWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
W +L DQALLAE G L DP F++R+N++L+
Sbjct: 591 EWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 623
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Length = 530 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 642 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 100.0 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.94 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.92 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.92 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.92 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 99.46 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 99.41 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 99.4 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 99.36 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 99.33 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 99.14 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 99.07 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.92 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.91 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.88 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.87 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.58 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 98.48 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 98.29 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.62 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 97.53 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.5 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.38 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.37 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.33 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 97.32 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 97.31 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 97.3 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.3 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.29 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 97.2 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 97.19 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.19 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.19 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.09 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 97.08 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 97.07 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 96.87 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.68 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.62 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 95.75 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 95.39 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 94.84 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 94.52 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 88.02 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-153 Score=1294.72 Aligned_cols=614 Identities=40% Similarity=0.723 Sum_probs=554.1
Q ss_pred ccccceeeehhHHHHHHHHhcCCCchhHHHHHHhcHHHHhHhhhhhhhcccccCCCCCCceEEEEEcCCCCEEEEEeCCC
Q psy2391 13 KQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEIIITFDKDNRTINISDNGI 92 (642)
Q Consensus 13 ~~~~~F~~e~~~ll~ll~~~LYs~~~i~lRELIqNA~DA~~~~~~~~~~~~~~~~~~~~~~I~I~~d~~~~~i~I~DnGi 92 (642)
.+++.||+|+++||++|+++||||+++|||||||||+||++++|+.++++++......++.|+|.++.++++|+|+|||+
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence 47899999999999999999999999999999999999999999999999988777778899999998889999999999
Q ss_pred CCCHHHHHHHHHHHHhccchhhHhhhhcCccccccccccccchhhhhhcccCEEEEEeecCCCCCCceEEEEEeCCcceE
Q psy2391 93 GMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFT 172 (642)
Q Consensus 93 GMt~~el~~~l~~ia~Sg~~~f~~~~~~~~~~~~~~iG~fGiGf~S~f~v~~~v~V~Sr~~~~~~~~~~~w~~~~~~~~~ 172 (642)
|||++||.++|++||+||++.|+++++. ..+...||||||||||+||||++|+|+||+.+ +.++.|+++|++.|+
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~--~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~---~~~~~W~s~g~~~~t 157 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSA--GADVSMIGQFGVGFYSLFLVADRVQVISKSND---DEQYIWESNAGGSFT 157 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCS--SCCCCCCCCTTCTTGGGGGTEEEEEEEEECTT---SCEEEEEECSSSEEE
T ss_pred CCCHHHHHHHHHhHhccccHHHHHhhhc--ccchhhcCCCCchhHHHhhcCcEEEEEEccCC---CceEEEEEcCCceEE
Confidence 9999999999999999999999988874 25778999999999999999999999999986 469999999999999
Q ss_pred EEec---CCCCCccEEEEEecCchhhccCHHHHHHHHHHhhccCCCCeEeeeccc---c--cc-----------------
Q psy2391 173 IETI---NKTNRGTDITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETW---D--EE----------------- 227 (642)
Q Consensus 173 v~~~---~~~~~GT~I~l~lk~~~~e~~~~~~i~~~i~~ys~~l~~pI~~~~~~~---~--~~----------------- 227 (642)
++++ ...++||+|+|+|+++..+|++.++|+++|++||+|++|||+++..+. + ++
T Consensus 158 i~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~ 237 (677)
T 2cg9_A 158 VTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDE 237 (677)
T ss_dssp EEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC---------------------
T ss_pred EeecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccccc
Confidence 9985 356899999999999999999999999999999999999999963211 0 00
Q ss_pred ----------cc---c------cccccCceEEeecCccccccCCCCCCHHHHHHHHhhhccCCCCCceeeecccccceEE
Q psy2391 228 ----------KK---E------TVISNNEFEVINQASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEY 288 (642)
Q Consensus 228 ----------g~---~------~~~~~~~~~~~n~~~~iw~~~~~~~~~e~~~~fy~~~~~~~~~~l~~~~~~~eg~~~~ 288 (642)
|+ + .++...+|+.+|+++|||+++++++++++|.+||++++++|++||+|+|+++||+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~ 317 (677)
T 2cg9_A 238 DDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEF 317 (677)
T ss_dssp ------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCE
T ss_pred cccccccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceE
Confidence 00 0 0112467899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCCCCccc-cccCCccEEEEcceeeecCCCchhhhhhhceeeeecCCCCCCccchhhhccChhHHHHHHHHH
Q psy2391 289 IQLLYIPSRAPYDLWD-RNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGST 367 (642)
Q Consensus 289 ~gll~iP~~~p~~~~~-~~~~~~~~lyv~~v~i~d~~~~llP~~l~Fv~Gvvds~dl~lNvSRE~lq~~~~l~~i~~~l~ 367 (642)
+|+||||+++||++|. +..++||+||||||||+|+|++|||+||+||+|||||+|||||||||+||+|+++++||+.|+
T Consensus 318 ~~lLyiP~~ap~d~~~~~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~ 397 (677)
T 2cg9_A 318 RAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIV 397 (677)
T ss_dssp EEEEEECSSCCC---------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHHH
T ss_pred EEEEEEcCCCchhhhhhhhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHHH
Confidence 9999999999999996 677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHhhcccCCcchHHHhcccceeeecCCCCCCCcccHHHHHHhhhcCCCe
Q psy2391 368 KRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDIQNVSLMDYIKRMKEGQNK 447 (642)
Q Consensus 368 ~~i~~~l~~la~~~~~e~~~~y~~f~~~~~~~lK~g~~~D~~~~~~~~~ll~f~ts~~~~~~~~~sL~eY~~rm~~~q~~ 447 (642)
+|++++|.++|++ ++ .|.+||++||.+||+|+++|+.||++|++||||+||.++ ++++||+||++|||++|+.
T Consensus 398 kkvl~~l~~la~~--~e---~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~--~~~~sL~eYv~rmke~Q~~ 470 (677)
T 2cg9_A 398 KKLIEAFNEIAED--SE---QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSV--DELTSLTDYVTRMPEHQKN 470 (677)
T ss_dssp HHHHHHHHHHHSC--SH---HHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCT--TSCBCSTTHHHHSCTTCCE
T ss_pred HHHHHHHHHHHhC--HH---HHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCC--CceeeHHHHHHhccccCce
Confidence 9999999999987 78 999999999999999999999999999999999999864 2689999999999999999
Q ss_pred EEEEEcCCHhhHhcCcchHHHHhcCCEEEEeCCCchhHHhhcccccCCcceEEeecCCCCCCCCccchhhhhhhhhHHHH
Q psy2391 448 IYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSFIPKFENKELVSIAKGNLDLGNLENESDKKQQKETETKF 527 (642)
Q Consensus 448 Iyy~~~~~~~~~~~sp~lE~~~~kg~eVL~l~d~iDe~~l~~l~~~~~~~f~~v~~~~~~l~~~~~~~~~~~~~~~~~~~ 527 (642)
|||++|+|++++++|||+|.|+++|+|||||++||||||+++|.+|+|++|++|+++ +++++.+++ ++..++.++++
T Consensus 471 IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~--~~~~~~~~~~~ 547 (677)
T 2cg9_A 471 IYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEE--KAEREKEIKEY 547 (677)
T ss_dssp EEEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTS--STTHHHHHGGG
T ss_pred EEEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhh--hhhhhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 887653221 22334557789
Q ss_pred HHHHHHHHHHhcccceEEEEeecCCCCCeEEEecCCCcchhHHHHHHHccCC------CCCCCceEEEcCCCHHHHHHhh
Q psy2391 528 QNLIEEMKKILSEKAKDVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQE------TPNSKPILEINPNHALIQRIQL 601 (642)
Q Consensus 528 ~~L~~~~k~~L~~~v~~V~vs~rL~~sPa~~v~~e~~~s~~m~r~m~~~~~~------~~~~k~~LEINp~HplIkkL~~ 601 (642)
++|++|+|++|+++|.+|++|+||++||||+|++++|||++|+|||++|++. ++..+++|||||+||||++|..
T Consensus 548 ~~L~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~ 627 (677)
T 2cg9_A 548 EPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKK 627 (677)
T ss_dssp HHHHHHHHHTTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCcceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999853 3467899999999999999975
Q ss_pred -------CcccHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHhcc
Q psy2391 602 -------NNDNIHNWSHILFDQALLAENGVLNDPMNFVKRLNEMLLI 641 (642)
Q Consensus 602 -------~~~~~~~~~~~Lyd~All~~G~~l~d~~~f~~r~~~ll~~ 641 (642)
+++.++++|++|||+|+|++|+.++||+.|++|+|+||.+
T Consensus 628 ~~~~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~ 674 (677)
T 2cg9_A 628 RVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISL 674 (677)
T ss_dssp HHHTCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSS
T ss_pred hhhccccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence 2346899999999999999999999999999999999864
|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 642 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 2e-86 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 1e-61 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 8e-59 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 4e-57 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 4e-34 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 268 bits (686), Expect = 2e-86
Identities = 118/259 (45%), Positives = 174/259 (67%), Gaps = 8/259 (3%)
Query: 246 ALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD- 304
LW R S+IT E+Y FYK IS+D+E PL H VEG+ E+ +L+IP RAP+DL++
Sbjct: 4 PLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES 63
Query: 305 RNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIRE 364
+ K+N IKLYV+RVFI D+AE L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KVIR+
Sbjct: 64 KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRK 123
Query: 365 GSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTN 424
K+++ +++ +++ + F+ F + IK G+ ED N+ ++KLLR+ +
Sbjct: 124 NIVKKLIEAFNEIAEDSEQ-----FEKFYSAFSKNIKLGVHEDTQNRAALAKLLRY--NS 176
Query: 425 NDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDE 484
S + SL DY+ RM E Q IYYITGE+ KSV+ SP L+ + K+ EVL LTD +DE
Sbjct: 177 TKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDE 236
Query: 485 WMLSFIPKFENKELVSIAK 503
+ + + +FE K LV I K
Sbjct: 237 YAFTQLKEFEGKTLVDITK 255
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 642 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 100.0 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.76 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.72 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.44 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 98.27 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 98.09 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.87 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.79 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 97.64 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.58 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.5 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.47 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.41 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 97.38 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 97.34 | |
| d1b63a1 | 115 | DNA mismatch repair protein MutL {Escherichia coli | 97.3 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 97.18 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 96.41 | |
| d1h7sa1 | 134 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 95.48 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 94.55 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.5e-76 Score=592.49 Aligned_cols=254 Identities=47% Similarity=0.846 Sum_probs=236.3
Q ss_pred CccccccCCCCCCHHHHHHHHhhhccCCCCCceeeecccccceEEEEEEEeeCCCCCCccc-cccCCccEEEEcceeeec
Q psy2391 244 ASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-RNKRNGIKLYVKRVFIMD 322 (642)
Q Consensus 244 ~~~iw~~~~~~~~~e~~~~fy~~~~~~~~~~l~~~~~~~eg~~~~~gll~iP~~~p~~~~~-~~~~~~~~lyv~~v~i~d 322 (642)
.+|||+++++++++|+|.+||+++++++++||.|+|+++||+++|+|+||||+.+|+++|. ....+|++||||||||+|
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~~~~~~ikLY~~rVfI~d 81 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 81 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEEES
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhhhhcCCeEEEEEeeeecc
Confidence 5799999999999999999999999999999999999999999999999999999999994 466889999999999999
Q ss_pred CCCchhhhhhhceeeeecCCCCCCccchhhhccChhHHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHhh
Q psy2391 323 DAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKE 402 (642)
Q Consensus 323 ~~~~llP~~l~Fv~Gvvds~dl~lNvSRE~lq~~~~l~~i~~~l~~~i~~~l~~la~~~~~e~~~~y~~f~~~~~~~lK~ 402 (642)
+|++|||+||+||+|||||+|||||||||+||+|+++++|++.|++||+++|++++++ ++ +|.+||++||.+||+
T Consensus 82 ~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~d--~e---ky~~fw~~fg~~lK~ 156 (256)
T d1usua_ 82 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAED--SE---QFEKFYSAFSKNIKL 156 (256)
T ss_dssp CCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTC--HH---HHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhC--HH---HHHHHHHHHhHHHhh
Confidence 9999999999999999999999999999999999999999999999999999887654 89 999999999999999
Q ss_pred cccCCcchHHHhcccceeeecCCCCCCCcccHHHHHHhhhcCCCeEEEEEcCCHhhHhcCcchHHHHhcCCEEEEeCCCc
Q psy2391 403 GIGEDNNNKERISKLLRFASTNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRV 482 (642)
Q Consensus 403 g~~~D~~~~~~~~~ll~f~ts~~~~~~~~~sL~eY~~rm~~~q~~Iyy~~~~~~~~~~~sp~lE~~~~kg~eVL~l~d~i 482 (642)
||++|.+|++++++||+|+||.+. ++++||+||++||+++|+.|||++|++.+++++|||+|.|+++|+|||+|+|||
T Consensus 157 G~~~D~~~~e~l~~ll~f~ss~s~--~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpi 234 (256)
T d1usua_ 157 GVHEDTQNRAALAKLLRYNSTKSV--DELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPI 234 (256)
T ss_dssp HHHHCTTTHHHHHTTCEEEETTEE--EEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHH
T ss_pred hccccHHHHHHHHHhhhhhccCCC--cceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCch
Confidence 999999999999999999999874 379999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcccccCCcceEEeecC
Q psy2391 483 DEWMLSFIPKFENKELVSIAKG 504 (642)
Q Consensus 483 De~~l~~l~~~~~~~f~~v~~~ 504 (642)
||||+++|.+|+|++|++|+++
T Consensus 235 De~~i~~l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 235 DEYAFTQLKEFEGKTLVDITKD 256 (256)
T ss_dssp HHHHHHHHCEETTEEEEETTCC
T ss_pred HHHHHHHHHHhCCCceeecCCC
Confidence 9999999999999999999764
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1b63a1 d.14.1.3 (A:217-331) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1h7sa1 d.14.1.3 (A:232-365) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|