Psyllid ID: psy240

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MAEATEMAEASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
ccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccEEEEcccccccEEEEEccccccccccHHHHccccccEEEcccccccccccccccccccEEEcccccEEEEEccccccHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHcccccEEEEEEEEccEEEEEEcccccccccccEEcccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccEEEEEccccEEEEEEccccEEEEEEcccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccc
cccccccccccccccccccHHccEEEEEccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccEEEEccccccHHcccHHHHHHccccEEEEEEEEEccccccccccccEEEEEcccEEEEEEccccccHHHHHHHHHHcccEEEEccHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccEEEEEEccccEEEEEcccccccEEEEEEcccccccccccccccccccEEEEEccccEcccccccccEEEEEEcccHHHHHHcccEEEEEccccEEEEEEccccEEEEcccccccccccEEHHHHHcccccccEEccccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcccccc
MAEATEMAEASSSVVSGLTHEcgvfacvstgtwptqIDVAHTICMGLIALqhrgqesagivtsegidsRRFNIMKGMGMIsnifndenlkklkgnlgightrystsaaseevncqpfvvHTAHGVLavahngeivnAERLRRMVLSRgvglstrsdsELITQAlclnppdgerdgpdwpaRITHLMKLTPLSYSLVIMEKDRVFavrdpygnrplcigkilpmkgsqstvfdfrgqesagivtsegidsRRFNIMKGMGMISnifndenlkklkgaryvrevypgeilEVSRtgiktvsivrrpddkppafcIFEYVyfarsdsifegadsLQYLSVEGLKQAVQLKMKvdsaegsfghctacltgeypeeldwyg
MAEATEMAEASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHngeivnaerLRRMVLSRGvglstrsdselITQAlclnppdgerDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRgqesagivtsegidsrRFNIMKGMGMISNIFNDENLKKLKGARYVRevypgeilevsrtgiktvsivrrpddkppaFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSaegsfghctacltgeypeeldwyg
maeatemaeasssvvsGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
**************VSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLN*********DWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDW**
******************THECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
***************SGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
**************VSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPM************QESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
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MAEATEMAEASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDWYG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q27601 546 Amidophosphoribosyltransf no N/A 0.784 0.540 0.618 1e-110
P35433 517 Amidophosphoribosyltransf yes N/A 0.859 0.624 0.498 7e-94
P28173 510 Amidophosphoribosyltransf yes N/A 0.765 0.564 0.550 3e-93
Q06203 517 Amidophosphoribosyltransf yes N/A 0.827 0.601 0.507 4e-92
Q86A85 521 Amidophosphoribosyltransf yes N/A 0.720 0.520 0.391 2e-55
Q55038 493 Amidophosphoribosyltransf yes N/A 0.747 0.569 0.345 7e-44
Q57657 471 Probable amidophosphoribo yes N/A 0.686 0.547 0.351 7e-42
Q55621 495 Amidophosphoribosyltransf N/A N/A 0.675 0.513 0.347 9e-38
O26742 474 Amidophosphoribosyltransf yes N/A 0.694 0.550 0.352 1e-36
Q9SI61 566 Amidophosphoribosyltransf yes N/A 0.702 0.466 0.325 1e-35
>sp|Q27601|PUR1_DROME Amidophosphoribosyltransferase OS=Drosophila melanogaster GN=Prat PE=1 SV=2 Back     alignment and function desciption
 Score =  397 bits (1021), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 233/320 (72%), Gaps = 25/320 (7%)

Query: 10  ASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSR 69
           ++S  ++GLTHECGVF  ++ G WPTQ+D+AH IC+GL+ALQHRGQESAGI TSEG  S+
Sbjct: 42  SASKELTGLTHECGVFGAIACGDWPTQMDIAHVICLGLVALQHRGQESAGIATSEGKCSK 101

Query: 70  RFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVA 129
            FN+ KGMGMIS +FND+++KKL+GNLGIGHTRYST+  S  VNCQPF VHT HG LA+A
Sbjct: 102 NFNVHKGMGMISTLFNDDSMKKLRGNLGIGHTRYSTAGGSGVVNCQPFEVHTTHGALALA 161

Query: 130 HNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPD-GERDGPDWPARITHLMKL 188
           HNGE+VN E LRR VL+RGVGLST SDSELI Q+LC  P D  E DGP+WPARI H M L
Sbjct: 162 HNGELVNNESLRREVLARGVGLSTHSDSELIAQSLCCAPEDVSELDGPNWPARIRHFMML 221

Query: 189 TPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGID 248
            PLSYSLVIM KD+++AVRD YGNRPLCIGKI+P+        D        +V+SE   
Sbjct: 222 APLSYSLVIMLKDKIYAVRDTYGNRPLCIGKIVPINAGHGNNLDTPAD--GWVVSSESC- 278

Query: 249 SRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKP 308
                     G +S            GARYVREV PGEI+E+SR+G +TV IV RPD K 
Sbjct: 279 ----------GFLS-----------IGARYVREVEPGEIVELSRSGYRTVDIVERPDFKR 317

Query: 309 PAFCIFEYVYFARSDSIFEG 328
            AFCIFEYVYFAR DSIFEG
Sbjct: 318 MAFCIFEYVYFARGDSIFEG 337

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 4
>sp|P35433|PUR1_RAT Amidophosphoribosyltransferase OS=Rattus norvegicus GN=Ppat PE=1 SV=1 Back     alignment and function description
>sp|P28173|PUR1_CHICK Amidophosphoribosyltransferase OS=Gallus gallus GN=PPAT PE=2 SV=1 Back     alignment and function description
>sp|Q06203|PUR1_HUMAN Amidophosphoribosyltransferase OS=Homo sapiens GN=PPAT PE=1 SV=1 Back     alignment and function description
>sp|Q86A85|PUR1_DICDI Amidophosphoribosyltransferase OS=Dictyostelium discoideum GN=purF PE=3 SV=1 Back     alignment and function description
>sp|Q55038|PUR1_SYNE7 Amidophosphoribosyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=purF PE=3 SV=1 Back     alignment and function description
>sp|Q57657|PUR1_METJA Probable amidophosphoribosyltransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=purF PE=3 SV=3 Back     alignment and function description
>sp|Q55621|PUR1_SYNY3 Amidophosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=purF PE=3 SV=1 Back     alignment and function description
>sp|O26742|PUR1_METTH Amidophosphoribosyltransferase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=purF PE=3 SV=1 Back     alignment and function description
>sp|Q9SI61|ASE1_ARATH Amidophosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=ASE1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
380019047 527 PREDICTED: amidophosphoribosyltransferas 0.776 0.554 0.682 1e-125
66529543 525 PREDICTED: amidophosphoribosyltransferas 0.776 0.556 0.682 1e-125
383865359 498 PREDICTED: amidophosphoribosyltransferas 0.776 0.586 0.681 1e-124
340711069 534 PREDICTED: amidophosphoribosyltransferas 0.773 0.544 0.684 1e-124
156543142 545 PREDICTED: amidophosphoribosyltransferas 0.773 0.533 0.690 1e-123
307204518 545 Amidophosphoribosyltransferase [Harpegna 0.808 0.557 0.661 1e-123
350405576 534 PREDICTED: amidophosphoribosyltransferas 0.773 0.544 0.681 1e-123
332027115 523 Amidophosphoribosyltransferase [Acromyrm 0.776 0.558 0.680 1e-122
170045974 554 amidophosphoribosyltransferase [Culex qu 0.779 0.528 0.680 1e-120
157137373 575 amidophosphoribosyltransferase [Aedes ae 0.773 0.506 0.681 1e-120
>gi|380019047|ref|XP_003693429.1| PREDICTED: amidophosphoribosyltransferase-like [Apis florea] Back     alignment and taxonomy information
 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/315 (68%), Positives = 253/315 (80%), Gaps = 23/315 (7%)

Query: 14  VVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNI 73
           +++GLTHECGVF C++ G WP+QIDVA  IC+GL+ALQHRGQESAGIVTSEG+ S+ F++
Sbjct: 30  IITGLTHECGVFGCIAAGDWPSQIDVAQVICLGLVALQHRGQESAGIVTSEGVCSKSFHV 89

Query: 74  MKGMGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGE 133
            KGMGMI+NIFNDEN+KKL GNLGIGHTRYSTSAASEEVNCQPFVVHTAHG LAVAHNGE
Sbjct: 90  HKGMGMINNIFNDENMKKLNGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGALAVAHNGE 149

Query: 134 IVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSY 193
           +VN E LR+MVL RGVGLST SDSELITQALCLNPP+GE +GPDWPARI HLM+L PLSY
Sbjct: 150 LVNTESLRKMVLGRGVGLSTYSDSELITQALCLNPPEGEVNGPDWPARIKHLMQLAPLSY 209

Query: 194 SLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFN 253
           SLVIM++D+++ VRDPYGNRPLC+GKI+P+ G+     D   +    +++SE        
Sbjct: 210 SLVIMQRDKIYGVRDPYGNRPLCLGKIVPI-GNLGNESDDDDEAEGWVISSESC------ 262

Query: 254 IMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCI 313
                G +S            GARYVREV+PGEI+E++R GIKT+ IV RPD KP AFCI
Sbjct: 263 -----GFLS-----------IGARYVREVFPGEIVELTREGIKTIDIVDRPDKKPQAFCI 306

Query: 314 FEYVYFARSDSIFEG 328
           FEYVYFARSDSIFEG
Sbjct: 307 FEYVYFARSDSIFEG 321

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|66529543|ref|XP_396074.2| PREDICTED: amidophosphoribosyltransferase-like [Apis mellifera] Back     alignment and taxonomy information
>gi|383865359|ref|XP_003708141.1| PREDICTED: amidophosphoribosyltransferase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340711069|ref|XP_003394104.1| PREDICTED: amidophosphoribosyltransferase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|156543142|ref|XP_001605718.1| PREDICTED: amidophosphoribosyltransferase [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307204518|gb|EFN83198.1| Amidophosphoribosyltransferase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350405576|ref|XP_003487483.1| PREDICTED: amidophosphoribosyltransferase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332027115|gb|EGI67211.1| Amidophosphoribosyltransferase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|170045974|ref|XP_001850563.1| amidophosphoribosyltransferase [Culex quinquefasciatus] gi|167868921|gb|EDS32304.1| amidophosphoribosyltransferase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157137373|ref|XP_001657044.1| amidophosphoribosyltransferase [Aedes aegypti] gi|157137375|ref|XP_001657045.1| amidophosphoribosyltransferase [Aedes aegypti] gi|108880885|gb|EAT45110.1| AAEL003581-PA [Aedes aegypti] gi|108880886|gb|EAT45111.1| AAEL003581-PB [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
FB|FBgn0004901 546 Prat "Phosphoribosylamidotrans 0.574 0.395 0.691 1.9e-116
FB|FBgn0041194 547 Prat2 "Phosphoribosylamidotran 0.601 0.413 0.670 1e-115
UNIPROTKB|F1P3I8 510 PPAT "Amidophosphoribosyltrans 0.603 0.445 0.597 4.4e-101
UNIPROTKB|P28173 510 PPAT "Amidophosphoribosyltrans 0.603 0.445 0.597 5.6e-101
ZFIN|ZDB-GENE-041210-323 508 ppat "phosphoribosyl pyrophosp 0.566 0.419 0.621 4.4e-99
RGD|620237 517 Ppat "phosphoribosyl pyrophosp 0.603 0.439 0.571 1.8e-96
UNIPROTKB|F1RTV1 539 PPAT "Amidophosphoribosyltrans 0.603 0.421 0.567 3.8e-96
UNIPROTKB|Q06203 517 PPAT "Amidophosphoribosyltrans 0.603 0.439 0.567 2.1e-95
UNIPROTKB|F1MV22 539 PPAT "Amidophosphoribosyltrans 0.550 0.384 0.605 7.8e-94
UNIPROTKB|E2RF42 517 PPAT "Amidophosphoribosyltrans 0.601 0.437 0.568 7.8e-94
FB|FBgn0004901 Prat "Phosphoribosylamidotransferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 815 (292.0 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
 Identities = 150/217 (69%), Positives = 174/217 (80%)

Query:    17 GLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKG 76
             GLTHECGVF  ++ G WPTQ+D+AH IC+GL+ALQHRGQESAGI TSEG  S+ FN+ KG
Sbjct:    49 GLTHECGVFGAIACGDWPTQMDIAHVICLGLVALQHRGQESAGIATSEGKCSKNFNVHKG 108

Query:    77 MGMISNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVN 136
             MGMIS +FND+++KKL+GNLGIGHTRYST+  S  VNCQPF VHT HG LA+AHNGE+VN
Sbjct:   109 MGMISTLFNDDSMKKLRGNLGIGHTRYSTAGGSGVVNCQPFEVHTTHGALALAHNGELVN 168

Query:   137 AERLRRMVLSRGVGLSTRSDSELITQALCLNPPD-GERDGPDWPARITHLMKLTPLSYSL 195
              E LRR VL+RGVGLST SDSELI Q+LC  P D  E DGP+WPARI H M L PLSYSL
Sbjct:   169 NESLRREVLARGVGLSTHSDSELIAQSLCCAPEDVSELDGPNWPARIRHFMMLAPLSYSL 228

Query:   196 VIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFD 232
             VIM KD+++AVRD YGNRPLCIGKI+P+        D
Sbjct:   229 VIMLKDKIYAVRDTYGNRPLCIGKIVPINAGHGNNLD 265
GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA;ISS
GO:0004044 "amidophosphoribosyltransferase activity" evidence=ISS;IMP
GO:0006189 "'de novo' IMP biosynthetic process" evidence=NAS
GO:0009116 "nucleoside metabolic process" evidence=IEA
GO:0008340 "determination of adult lifespan" evidence=IMP
GO:0048477 "oogenesis" evidence=IMP
GO:0040016 "embryonic cleavage" evidence=IMP
FB|FBgn0041194 Prat2 "Phosphoribosylamidotransferase 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1P3I8 PPAT "Amidophosphoribosyltransferase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P28173 PPAT "Amidophosphoribosyltransferase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041210-323 ppat "phosphoribosyl pyrophosphate amidotransferase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|620237 Ppat "phosphoribosyl pyrophosphate amidotransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RTV1 PPAT "Amidophosphoribosyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q06203 PPAT "Amidophosphoribosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MV22 PPAT "Amidophosphoribosyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RF42 PPAT "Amidophosphoribosyltransferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q06203PUR1_HUMAN2, ., 4, ., 2, ., 1, 40.50740.82710.6015yesN/A
P35433PUR1_RAT2, ., 4, ., 2, ., 1, 40.49860.85900.6247yesN/A
P28173PUR1_CHICK2, ., 4, ., 2, ., 1, 40.55090.76590.5647yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.20.766
4th Layer2.4.2.140.824

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
cd00715252 cd00715, GPATase_N, Glutamine amidotransferases cl 1e-110
TIGR01134 442 TIGR01134, purF, amidophosphoribosyltransferase 3e-78
COG0034 470 COG0034, PurF, Glutamine phosphoribosylpyrophospha 7e-78
PRK05793 469 PRK05793, PRK05793, amidophosphoribosyltransferase 2e-71
PRK07349 500 PRK07349, PRK07349, amidophosphoribosyltransferase 2e-65
PRK09123 479 PRK09123, PRK09123, amidophosphoribosyltransferase 8e-63
PLN02440 479 PLN02440, PLN02440, amidophosphoribosyltransferase 1e-61
PRK07847 510 PRK07847, PRK07847, amidophosphoribosyltransferase 1e-55
PRK08525 445 PRK08525, PRK08525, amidophosphoribosyltransferase 3e-53
PRK07272 484 PRK07272, PRK07272, amidophosphoribosyltransferase 1e-48
PRK06388 474 PRK06388, PRK06388, amidophosphoribosyltransferase 6e-46
cd00352220 cd00352, Gn_AT_II, Glutamine amidotransferases cla 1e-45
PRK07631 475 PRK07631, PRK07631, amidophosphoribosyltransferase 1e-44
PRK09246 501 PRK09246, PRK09246, amidophosphoribosyltransferase 2e-42
pfam00310223 pfam00310, GATase_2, Glutamine amidotransferases c 3e-40
PRK06781 471 PRK06781, PRK06781, amidophosphoribosyltransferase 5e-39
PRK08341 442 PRK08341, PRK08341, amidophosphoribosyltransferase 4e-37
COG0449 597 COG0449, GlmS, Glucosamine 6-phosphate synthetase, 1e-19
TIGR01135 607 TIGR01135, glmS, glucosamine--fructose-6-phosphate 2e-18
cd00714215 cd00714, GFAT, Glutamine amidotransferases class-I 3e-18
pfam13522130 pfam13522, GATase_6, Glutamine amidotransferase do 1e-16
pfam13537120 pfam13537, GATase_7, Glutamine amidotransferase do 3e-15
cd01907249 cd01907, GlxB, Glutamine amidotransferases class-I 2e-14
cd00712220 cd00712, AsnB, Glutamine amidotransferases class-I 2e-14
PRK00331 604 PRK00331, PRK00331, glucosamine--fructose-6-phosph 3e-13
cd01908257 cd01908, YafJ, Glutamine amidotransferases class-I 5e-11
COG0367 542 COG0367, AsnB, Asparagine synthase (glutamine-hydr 3e-10
PTZ00295 640 PTZ00295, PTZ00295, glucosamine-fructose-6-phospha 4e-10
PLN02981 680 PLN02981, PLN02981, glucosamine:fructose-6-phospha 3e-09
PTZ00394 670 PTZ00394, PTZ00394, glucosamine-fructose-6-phospha 9e-09
TIGR01536 466 TIGR01536, asn_synth_AEB, asparagine synthase (glu 1e-07
COG0067371 COG0067, GltB, Glutamate synthase domain 1 [Amino 2e-07
COG0034470 COG0034, PurF, Glutamine phosphoribosylpyrophospha 3e-07
PRK08341442 PRK08341, PRK08341, amidophosphoribosyltransferase 4e-07
TIGR01134442 TIGR01134, purF, amidophosphoribosyltransferase 3e-06
PRK06388474 PRK06388, PRK06388, amidophosphoribosyltransferase 8e-06
PRK07631475 PRK07631, PRK07631, amidophosphoribosyltransferase 3e-05
PRK05793469 PRK05793, PRK05793, amidophosphoribosyltransferase 4e-05
COG0121252 COG0121, COG0121, Predicted glutamine amidotransfe 4e-05
PRK09431 554 PRK09431, asnB, asparagine synthetase B; Provision 1e-04
PRK07272484 PRK07272, PRK07272, amidophosphoribosyltransferase 5e-04
PRK09123479 PRK09123, PRK09123, amidophosphoribosyltransferase 7e-04
PTZ00077 586 PTZ00077, PTZ00077, asparagine synthetase-like pro 8e-04
TIGR03104 589 TIGR03104, trio_amidotrans, asparagine synthase fa 0.001
PRK07349500 PRK07349, PRK07349, amidophosphoribosyltransferase 0.002
PRK07847510 PRK07847, PRK07847, amidophosphoribosyltransferase 0.002
>gnl|CDD|238367 cd00715, GPATase_N, Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information 
 Score =  323 bits (830), Expect = e-110
 Identities = 118/306 (38%), Positives = 162/306 (52%), Gaps = 54/306 (17%)

Query: 22  CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMIS 81
           CGVF            D A    +GL ALQHRGQESAGI TS   D +RF+  KGMG++S
Sbjct: 1   CGVFGIYG------AEDAARLTYLGLYALQHRGQESAGIATS---DGKRFHTHKGMGLVS 51

Query: 82  NIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLR 141
           ++F++E L++L GN+ IGH RYST+ +S   N QPFVV++  G +A+AHNG +VNA+ LR
Sbjct: 52  DVFDEEKLRRLPGNIAIGHVRYSTAGSSSLENAQPFVVNSPLGGIALAHNGNLVNAKELR 111

Query: 142 RMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEKD 201
             +   G    T SDSE+I   +            D    I   ++    +YSLVIM  D
Sbjct: 112 EELEEEGRIFQTTSDSEVILHLIA-----RSLAKDDLFEAIIDALERVKGAYSLVIMTAD 166

Query: 202 RVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMGMI 261
            + AVRDP+G RPL +GK+               +    +V SE   S   +I+      
Sbjct: 167 GLIAVRDPHGIRPLVLGKL---------------EGDGYVVASE---SCALDII------ 202

Query: 262 SNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFAR 321
                        GA +VR+V PGEI+ +   G+++    +R     PA CIFEYVYFAR
Sbjct: 203 -------------GAEFVRDVEPGEIVVIDDDGLES---SQRAPKPKPAPCIFEYVYFAR 246

Query: 322 SDSIFE 327
            DS+ +
Sbjct: 247 PDSVID 252

This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. GPATase crystalizes as a homotetramer, but can also exist as a homdimer. Length = 252
>gnl|CDD|233285 TIGR01134, purF, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|223112 COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|235611 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235998 PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236384 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|215241 PLN02440, PLN02440, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|236113 PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181456 PRK08525, PRK08525, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235984 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|102351 PRK06388, PRK06388, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238212 cd00352, Gn_AT_II, Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236427 PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|215851 pfam00310, GATase_2, Glutamine amidotransferases class-II Back     alignment and domain information
>gnl|CDD|136048 PRK06781, PRK06781, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223526 COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|130205 TIGR01135, glmS, glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>gnl|CDD|238366 cd00714, GFAT, Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>gnl|CDD|222195 pfam13522, GATase_6, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|222208 pfam13537, GATase_7, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|238888 cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>gnl|CDD|238364 cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>gnl|CDD|234729 PRK00331, PRK00331, glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|238889 cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type Back     alignment and domain information
>gnl|CDD|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|240349 PTZ00295, PTZ00295, glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215531 PLN02981, PLN02981, glucosamine:fructose-6-phosphate aminotransferase Back     alignment and domain information
>gnl|CDD|173585 PTZ00394, PTZ00394, glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|223145 COG0067, GltB, Glutamate synthase domain 1 [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|223112 COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|233285 TIGR01134, purF, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|102351 PRK06388, PRK06388, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235611 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223199 COG0121, COG0121, Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|236513 PRK09431, asnB, asparagine synthetase B; Provisional Back     alignment and domain information
>gnl|CDD|235984 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236384 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|234108 TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase Back     alignment and domain information
>gnl|CDD|235998 PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236113 PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
PRK07349 500 amidophosphoribosyltransferase; Provisional 100.0
PRK07847 510 amidophosphoribosyltransferase; Provisional 100.0
PRK07631 475 amidophosphoribosyltransferase; Provisional 100.0
PRK06781 471 amidophosphoribosyltransferase; Provisional 100.0
PRK05793 469 amidophosphoribosyltransferase; Provisional 100.0
PRK06388 474 amidophosphoribosyltransferase; Provisional 100.0
PRK07272 484 amidophosphoribosyltransferase; Provisional 100.0
PRK09123 479 amidophosphoribosyltransferase; Provisional 100.0
COG0034 470 PurF Glutamine phosphoribosylpyrophosphate amidotr 100.0
KOG0572|consensus 474 100.0
PRK08525 445 amidophosphoribosyltransferase; Provisional 100.0
PRK08341 442 amidophosphoribosyltransferase; Provisional 100.0
PLN02440 479 amidophosphoribosyltransferase 100.0
TIGR01134 442 purF amidophosphoribosyltransferase. Alternate nam 100.0
cd00715252 GPATase_N Glutamine amidotransferases class-II (GN 100.0
PRK09246 501 amidophosphoribosyltransferase; Provisional 100.0
TIGR03104 589 trio_amidotrans asparagine synthase family amidotr 100.0
PTZ00077 586 asparagine synthetase-like protein; Provisional 100.0
PRK09431 554 asnB asparagine synthetase B; Provisional 100.0
TIGR03108 628 eps_aminotran_1 exosortase 1 system-associated ami 100.0
cd01907249 GlxB Glutamine amidotransferases class-II (Gn-AT)_ 100.0
cd00714215 GFAT Glutamine amidotransferases class-II (Gn-AT)_ 100.0
PLN02549 578 asparagine synthase (glutamine-hydrolyzing) 100.0
COG0367 542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 100.0
PTZ00295 640 glucosamine-fructose-6-phosphate aminotransferase; 100.0
TIGR01536 467 asn_synth_AEB asparagine synthase (glutamine-hydro 100.0
PRK00331 604 glucosamine--fructose-6-phosphate aminotransferase 100.0
cd00712220 AsnB Glutamine amidotransferases class-II (GATase) 100.0
TIGR01135 607 glmS glucosamine--fructose-6-phosphate aminotransf 100.0
PLN02981 680 glucosamine:fructose-6-phosphate aminotransferase 100.0
COG0449 597 GlmS Glucosamine 6-phosphate synthetase, contains 100.0
PTZ00394 670 glucosamine-fructose-6-phosphate aminotransferase; 100.0
cd00352220 Gn_AT_II Glutamine amidotransferases class-II (GAT 100.0
TIGR03442251 conserved hypothetical protein TIGR03442. Members 100.0
cd03766181 Gn_AT_II_novel Gn_AT_II_novel. This asparagine syn 99.97
KOG0571|consensus 543 99.97
cd01908257 YafJ Glutamine amidotransferases class-II (Gn-AT)_ 99.97
KOG1268|consensus 670 99.96
cd01909199 betaLS_CarA_N Glutamine amidotransferases class-II 99.94
PF00310361 GATase_2: Glutamine amidotransferases class-II; In 99.94
PF13522133 GATase_6: Glutamine amidotransferase domain 99.94
cd00713413 GltS Glutamine amidotransferases class-II (Gn-AT), 99.93
PF13230271 GATase_4: Glutamine amidotransferases class-II; PD 99.91
PF13537125 GATase_7: Glutamine amidotransferase domain; PDB: 99.9
cd01910224 Wali7 This domain is present in Wali7, a protein o 99.81
PRK11750 1485 gltB glutamate synthase subunit alpha; Provisional 99.75
COG0067371 GltB Glutamate synthase domain 1 [Amino acid trans 99.75
COG0121252 Predicted glutamine amidotransferase [General func 99.69
KOG0573|consensus 520 99.46
PF12481228 DUF3700: Aluminium induced protein ; InterPro: IPR 98.94
KOG0399|consensus 2142 98.56
PF09147201 DUF1933: Domain of unknown function (DUF1933); Int 97.54
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 95.07
PRK09123479 amidophosphoribosyltransferase; Provisional 94.9
PRK06388474 amidophosphoribosyltransferase; Provisional 93.84
PRK06781471 amidophosphoribosyltransferase; Provisional 93.74
PRK07631475 amidophosphoribosyltransferase; Provisional 93.49
PRK05793469 amidophosphoribosyltransferase; Provisional 93.26
PRK07847510 amidophosphoribosyltransferase; Provisional 92.95
PLN02440479 amidophosphoribosyltransferase 92.64
PRK08341442 amidophosphoribosyltransferase; Provisional 92.63
PRK07349500 amidophosphoribosyltransferase; Provisional 92.15
PRK07272484 amidophosphoribosyltransferase; Provisional 91.51
PRK09246501 amidophosphoribosyltransferase; Provisional 90.53
PRK08525445 amidophosphoribosyltransferase; Provisional 89.14
KOG0572|consensus474 86.09
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 80.98
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-55  Score=447.11  Aligned_cols=298  Identities=38%  Similarity=0.604  Sum_probs=248.6

Q ss_pred             cCCccccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccc
Q psy240           10 ASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENL   89 (376)
Q Consensus        10 ~~~~~~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l   89 (376)
                      .+....++.++||||||+++...     ++..+++.+|.+|+|||||++||++.++.   .+.++|++|+++++|++..+
T Consensus        22 ~~~~~~~~~~emCGI~Gi~~~~~-----~~~~~~~~gL~~LqHRGqdsaGIa~~~~~---~~~~~K~~Glv~~vf~~~~l   93 (500)
T PRK07349         22 SSEERPDKPEEACGVFGVYAPGE-----EVAKLTYFGLYALQHRGQESAGIATFEGD---KVHLHKDMGLVSQVFDEDIL   93 (500)
T ss_pred             cccccCCCcccCCeEEEEECCCc-----CHHHHHHHHHHHhcccCcCcceEEEEeCC---EEEEEecCcchhhhcchhhh
Confidence            33344567889999999998542     35577889999999999999999999863   78999999999999998778


Q ss_pred             cccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCC
Q psy240           90 KKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPP  169 (376)
Q Consensus        90 ~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~  169 (376)
                      +.+.|+++|||+||||+|.++..|+|||...+..++++++|||+|+|+.+||++|...|+.|.+.||||+|+++|.+.+.
T Consensus        94 ~~l~G~i~IGHvRysT~G~~~~~naQP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi~~li~~~~~  173 (500)
T PRK07349         94 EELPGDLAVGHTRYSTTGSSRKANAQPAVLETRLGPLALAHNGNLVNTVELREELLARGCELTTTTDSEMIAFAIAQAVD  173 (500)
T ss_pred             hcCCCCEEEEEeecccCCCCCccCCCCeEeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHHh
Confidence            88899999999999999987778999999755568899999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCc
Q psy240          170 DGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGID  248 (376)
Q Consensus       170 ~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~  248 (376)
                      +    +.++.+++..++++|+|+|||++.+++.|+++||++|+|||||+...             ...++.++| ||+  
T Consensus       174 ~----~~~~~eai~~~~~~l~G~ya~vi~~~~~l~aaRDp~GiRPL~~G~~~-------------~~~~~~~~~ASE~--  234 (500)
T PRK07349        174 A----GKDWLEAAISAFQRCQGAFSLVIGTPEGLMGVRDPNGIRPLVIGTLG-------------EGGPGRYVLASET--  234 (500)
T ss_pred             c----CCCHHHHHHHHHHHhhhhEEEEEEeCCEEEEEECCCCCCCeEEEecc-------------cCCCCeEEEEecc--
Confidence            2    56799999999999999999999999999999999999999999741             001347888 999  


Q ss_pred             cchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCccccc
Q psy240          249 SRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEG  328 (376)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~  328 (376)
                               +++..           +|.+.|++|+||++++|++++++..++.  + ..+.++|+||||||+||||.+++
T Consensus       235 ---------~Al~~-----------lg~~~ir~v~PGeiv~i~~~g~~~~~~~--~-~~~~~~C~fE~vYfarpdS~~~g  291 (500)
T PRK07349        235 ---------CALDI-----------IGAEYLRDVEPGELVWITEGGLSSFHWA--Q-EPQRKLCIFEMIYFARPDSRMHG  291 (500)
T ss_pred             ---------chhhh-----------cCCceEEEeCCCeEEEEECCceEEEecc--c-CCCcceeEEEeeeccCCCCccCC
Confidence                     56643           5678899999999999999887776542  2 23457899999999999999999


Q ss_pred             chhhhHhhHHHHHHHhhhcccccccCCCc
Q psy240          329 ADSLQYLSVEGLKQAVQLKMKVDSAEGSF  357 (376)
Q Consensus       329 ~~~~~~~~~~~l~~Av~~rl~~d~~vg~~  357 (376)
                      ...++.+.+-.-..|-+.....|+.+++-
T Consensus       292 ~~V~~~R~~~G~~La~~~~~~~DvVv~VP  320 (500)
T PRK07349        292 ESLYSYRQRLGQQLAKESPVDADLVIGVP  320 (500)
T ss_pred             eEHHHHHHHHHHHHhhhcccCCcEEEEec
Confidence            98877665555566644444556665553

>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0572|consensus Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase Back     alignment and domain information
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>TIGR03442 conserved hypothetical protein TIGR03442 Back     alignment and domain information
>cd03766 Gn_AT_II_novel Gn_AT_II_novel Back     alignment and domain information
>KOG0571|consensus Back     alignment and domain information
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type Back     alignment and domain information
>KOG1268|consensus Back     alignment and domain information
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group Back     alignment and domain information
>PF13522 GATase_6: Glutamine amidotransferase domain Back     alignment and domain information
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type Back     alignment and domain information
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D Back     alignment and domain information
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A Back     alignment and domain information
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>PRK11750 gltB glutamate synthase subunit alpha; Provisional Back     alignment and domain information
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] Back     alignment and domain information
>COG0121 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>KOG0573|consensus Back     alignment and domain information
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length Back     alignment and domain information
>KOG0399|consensus Back     alignment and domain information
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG0572|consensus Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1gph_1 465 Structure Of The Allosteric Regulatory Enzyme Of Pu 6e-31
1gph_1465 Structure Of The Allosteric Regulatory Enzyme Of Pu 7e-04
1ao0_A 459 Glutamine Phosphoribosylpyrophosphate (Prpp) Amidot 9e-31
1ao0_A459 Glutamine Phosphoribosylpyrophosphate (Prpp) Amidot 7e-04
1ecf_A 504 Escherichia Coli Glutamine Phosphoribosylpyrophosph 1e-28
1xff_A240 Glutaminase Domain Of Glucosamine 6-Phosphate Synth 5e-12
2j6h_A 608 E. Coli Glucosamine-6-p Synthase In Complex With Gl 6e-12
1jxa_A 608 Glucosamine 6-Phosphate Synthase With Glucose 6-Pho 6e-12
3ooj_A 608 C1a Mutant Of E. Coli Glms In Complex With Glucose- 3e-11
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine Biosynthesis Length = 465 Back     alignment and structure 
Iteration: 1

 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 59/311 (18%)
Query: 22  CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMIS 81
           CGVF     G W  + +       GL +LQHRGQE AGIV ++G    +    KG G+I+
Sbjct: 1   CGVF-----GIWGHE-EAPQITYYGLHSLQHRGQEGAGIVATDG---EKLTAHKGQGLIT 51
Query: 82  NIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTA-HGVLAVAHNGEIVNAERL 140
            +F +  L K+KG   IGH RY+T+      N QP +  +  +G LA+AHNG +VNA +L
Sbjct: 52  EVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQL 111
Query: 141 RRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGP-DWPARITHLMKLTPLSYSLVIME 199
           ++ + ++G    T SD+E++   +       +R G      +I + + +   +Y+ +IM 
Sbjct: 112 KQQLENQGSIFQTSSDTEVLAHLI-------KRSGHFTLKDQIKNSLSMLKGAYAFLIMT 164
Query: 200 KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMKGMG 259
           +  +    DP G RPL IG    M G             A +V SE   +  F+++    
Sbjct: 165 ETEMIVALDPNGLRPLSIG----MMG------------DAYVVASE---TCAFDVV---- 201
Query: 260 MISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYF 319
                          GA Y+REV PGE+L ++  G+K+    R   +   + C  EY+YF
Sbjct: 202 ---------------GATYLREVEPGEMLIINDEGMKS---ERFSMNINRSICSMEYIYF 243
Query: 320 ARSDSIFEGAD 330
           +R DS  +G +
Sbjct: 244 SRPDSNIDGIN 254
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine Biosynthesis Length = 465 Back     alignment and structure
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase From B. Subtilis Complexed With Adp And Gmp Length = 459 Back     alignment and structure
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase From B. Subtilis Complexed With Adp And Gmp Length = 459 Back     alignment and structure
>pdb|1ECF|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase Length = 504 Back     alignment and structure
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase Complexed With Glutamate Length = 240 Back     alignment and structure
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With Glucose-6p And 5-oxo-l-norleucine Length = 608 Back     alignment and structure
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate Length = 608 Back     alignment and structure
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And Glutamate Length = 608 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1ao0_A 459 Glutamine phosphoribosylpyrophosphate amidotransfe 3e-96
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 6e-10
1ecf_A 504 Glutamine phosphoribosylpyrophosphate amidotransf; 5e-83
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 6e-07
1te5_A257 Conserved hypothetical protein; glutamine amidotra 3e-22
3mdn_A274 Glutamine aminotransferase class-II domain protei; 7e-19
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 7e-15
2bpl_A 608 Glucosamine--fructose-6-phosphate aminotransferase 3e-13
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1q15_A 503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 6e-09
1jgt_A 513 Beta-lactam synthetase; asparagine synthetase, cla 3e-08
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Length = 459 Back     alignment and structure
 Score =  293 bits (752), Expect = 3e-96
 Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 61/310 (19%)

Query: 22  CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMIS 81
           CGVF     G W  + +       GL +LQHRGQE AGIV ++G    +    KG G+I+
Sbjct: 1   CGVF-----GIWGHE-EAPQITYYGLHSLQHRGQEGAGIVATDG---EKLTAHKGQGLIT 51

Query: 82  NIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHT-AHGVLAVAHNGEIVNAERL 140
            +F +  L K+KG   IGH RY+T+      N QP +  +  +G LA+AHNG +VNA +L
Sbjct: 52  EVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQL 111

Query: 141 RRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIMEK 200
           ++ + ++G    T SD+E++   +  +             +I + + +   +Y+ +IM +
Sbjct: 112 KQQLENQGSIFQTSSDTEVLAHLIKRSG------HFTLKDQIKNSLSMLKGAYAFLIMTE 165

Query: 201 DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSE--GIDSRRFNIMKGM 258
             +    DP G RPL IG +                  A +V SE    D          
Sbjct: 166 TEMIVALDPNGLRPLSIGMM----------------GDAYVVASETCAFD---------- 199

Query: 259 GMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVY 318
                         + GA Y+REV PGE+L ++  G+K+    R   +   + C  EY+Y
Sbjct: 200 --------------VVGATYLREVEPGEMLIINDEGMKS---ERFSMNINRSICSMEYIY 242

Query: 319 FARSDSIFEG 328
           F+R DS  +G
Sbjct: 243 FSRPDSNIDG 252
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Length = 459 Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Length = 504 Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Length = 504 Back     alignment and structure
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1 Length = 257 Back     alignment and structure
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi} Length = 274 Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Length = 240 Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Length = 608 Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503 Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
1ao0_A 459 Glutamine phosphoribosylpyrophosphate amidotransfe 100.0
1ecf_A 504 Glutamine phosphoribosylpyrophosphate amidotransf; 100.0
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 100.0
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 100.0
2bpl_A 608 Glucosamine--fructose-6-phosphate aminotransferase 100.0
3mdn_A274 Glutamine aminotransferase class-II domain protei; 100.0
1te5_A257 Conserved hypothetical protein; glutamine amidotra 100.0
1jgt_A 513 Beta-lactam synthetase; asparagine synthetase, cla 99.96
1q15_A 503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 99.96
1ea0_A 1479 Glutamate synthase [NADPH] large chain; oxidoreduc 99.93
1ofd_A 1520 Ferredoxin-dependent glutamate synthase 2; oxidore 99.92
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 83.0
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 80.14
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
Probab=100.00  E-value=4e-50  Score=407.53  Aligned_cols=277  Identities=33%  Similarity=0.572  Sum_probs=233.2

Q ss_pred             eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240           22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT  101 (376)
Q Consensus        22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~  101 (376)
                      |||||+++..      ++...++.||.+|+|||||++|+++.++   +.+.++|++|.++++|++.+++.+.++++|||+
T Consensus         1 CGI~G~~~~~------~~~~~~~~~l~~L~hRG~D~~Gi~~~~~---~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~   71 (459)
T 1ao0_A            1 CGVFGIWGHE------EAPQITYYGLHSLQHRGQEGAGIVATDG---EKLTAHKGQGLITEVFQNGELSKVKGKGAIGHV   71 (459)
T ss_dssp             CEEEEEESCT------BHHHHHHHHHHHTGGGCCSEEEEEEECS---SCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEE
T ss_pred             CEEEEEECCc------chHHHHHHHHHHHHhcCCCcCCEEEEeC---CeEEEEecCCcHhhhcchhhhhccCCCEEEEEE
Confidence            9999999764      2456788999999999999999999875   378999999999999988888889999999999


Q ss_pred             ccccCCCCCCCCCCCceeec-CCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240          102 RYSTSAASEEVNCQPFVVHT-AHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA  180 (376)
Q Consensus       102 R~at~g~~~~~n~qPf~~~~-~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~  180 (376)
                      ||||+|.++..|+|||.... .+++++++|||+|+|+.+||++|...|+.|.+.||||+|+++|.++.      ..++.+
T Consensus        72 R~at~g~~~~~n~qP~~~~~~~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~~~~------~~~~~~  145 (459)
T 1ao0_A           72 RYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSG------HFTLKD  145 (459)
T ss_dssp             ECCC----CGGGSSSEEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHHTCC------CSSHHH
T ss_pred             ecCCCCCCCccCCCCceeccCCCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhc------cCCHHH
Confidence            99999987778999998643 56889999999999999999999999999999999999999999983      257899


Q ss_pred             HHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhccc
Q psy240          181 RITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMG  259 (376)
Q Consensus       181 ~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~  259 (376)
                      ++..++++++|+|||+++|+++|+++||++|.|||||+..                 ++.++| ||+           ++
T Consensus       146 a~~~~~~~l~G~fa~~i~d~~~l~~~RD~~G~rPL~~~~~-----------------~~~~~~ASE~-----------~a  197 (459)
T 1ao0_A          146 QIKNSLSMLKGAYAFLIMTETEMIVALDPNGLRPLSIGMM-----------------GDAYVVASET-----------CA  197 (459)
T ss_dssp             HHHHHHTTCCEEEEEEEECSSEEEEEECTTCCSCCEEEEE-----------------TTEEEEESST-----------HH
T ss_pred             HHHHHHHhhccceEEEEEeCCEEEEEECCCCCCCeEEEec-----------------CCEEEEEECc-----------hH
Confidence            9999999999999999999999999999999999999987                 577888 998           34


Q ss_pred             ccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhHHH
Q psy240          260 MISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEG  339 (376)
Q Consensus       260 ~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~~~  339 (376)
                      +..           ++.+.|++|+|||+++++.++.+..+||..   .+.++|+||||||++|++...+...  +..+..
T Consensus       198 l~~-----------~~~~~i~~l~pG~~~~i~~~~~~~~~~~~~---~~~~~c~feyiyfarp~s~~~~~~v--~~~r~~  261 (459)
T 1ao0_A          198 FDV-----------VGATYLREVEPGEMLIINDEGMKSERFSMN---INRSICSMEYIYFSRPDSNIDGINV--HSARKN  261 (459)
T ss_dssp             HHH-----------HTCEEEEECCTTEEEEEETTEEEEEESCSS---CCCCEEHHHHHTTSCTTCEETTEEH--HHHHHH
T ss_pred             Hhc-----------CCCceEEEECCCEEEEEECCceEEEecCCC---ccccccceeeeeccCCcchhccHhH--HHHHHH
Confidence            422           346889999999999999999888899953   2357899999999999987665543  345666


Q ss_pred             HHHHhhhcc--cccccCCCc
Q psy240          340 LKQAVQLKM--KVDSAEGSF  357 (376)
Q Consensus       340 l~~Av~~rl--~~d~~vg~~  357 (376)
                      |-+++...+  ..|+.+++-
T Consensus       262 lg~~La~~~~~~~DvVV~VP  281 (459)
T 1ao0_A          262 LGKMLAQESAVEADVVTGVP  281 (459)
T ss_dssp             HHHHHHHHHCCCCSEEECCT
T ss_pred             HHHHHHHhcccCCcEEEEEC
Confidence            777777644  456666653
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Back     alignment and structure
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi} Back     alignment and structure
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1 Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Back     alignment and structure
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1ecfa2249 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferas 3e-32
d1xffa_238 d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N 2e-28
d1te5a_253 d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) 4e-27
d1gph12234 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferas 2e-25
d1gph12234 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferas 0.001
d1q15a2204 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectob 2e-08
d1jgta2206 d.153.1.1 (A:4-209) beta-Lactam synthetase {Strept 1e-07
d1gph11231 c.61.1.1 (1:235-465) Glutamine PRPP amidotransfera 2e-06
d1gph11 231 c.61.1.1 (1:235-465) Glutamine PRPP amidotransfera 4e-05
d1ecfa1 243 c.61.1.1 (A:250-492) Glutamine PRPP amidotransfera 4e-05
d1ea0a3422 d.153.1.1 (A:1-422) Alpha subunit of glutamate syn 0.001
d1ofda3430 d.153.1.1 (A:1-430) Alpha subunit of glutamate syn 0.002
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 249 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ntn hydrolase-like
superfamily: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
family: Class II glutamine amidotransferases
domain: Glutamine PRPP amidotransferase, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  119 bits (299), Expect = 3e-32
 Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 47/278 (16%)

Query: 22  CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMIS 81
           CG+              V  +I   L  LQHRGQ++AGI+T +   +  F + K  G++S
Sbjct: 1   CGIVGIAGVM------PVNQSIYDALTVLQHRGQDAAGIITIDA--NNCFRLRKANGLVS 52

Query: 82  NIFNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLR 141
           ++F   ++++L+GN+GIGH RY T+ +S     QPF V++ +G+  +AHNG + NA  LR
Sbjct: 53  DVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGI-TLAHNGNLTNAHELR 111

Query: 142 RMVLSR-GVGLSTRSDSELITQALCL---NPPDGERDGPDWPARITHLMKLTPLSYSLVI 197
           + +       ++T SDSE++         N      +  +  A I    +L   +Y+ V 
Sbjct: 112 KKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVA 171

Query: 198 MEKDR-VFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMK 256
           M     + A RDP G RPL +GK    +     +      ES  + T             
Sbjct: 172 MIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMV---ASESVALDTL------------ 216

Query: 257 GMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTG 294
                             G  ++R+V PGE + ++  G
Sbjct: 217 ------------------GFDFLRDVAPGEAIYITEEG 236
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 238 Back     information, alignment and structure
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]} Length = 253 Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 234 Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 234 Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 204 Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 206 Back     information, alignment and structure
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 231 Back     information, alignment and structure
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 231 Back     information, alignment and structure
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 243 Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Length = 422 Back     information, alignment and structure
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Length = 430 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1gph12234 Glutamine PRPP amidotransferase, N-terminal domain 100.0
d1ecfa2249 Glutamine PRPP amidotransferase, N-terminal domain 100.0
d1xffa_238 Glucosamine 6-phosphate synthase, N-terminal domai 100.0
d1ct9a2192 Asparagine synthetase B, N-terminal domain {Escher 100.0
d1jgta2206 beta-Lactam synthetase {Streptomyces clavuligerus 99.96
d1q15a2204 beta-Lactam synthetase {Pectobacterium carotovorum 99.93
d1te5a_253 Hypothetical protein YafJ (PA1307) {Pseudomonas ae 99.93
d1ofda3430 Alpha subunit of glutamate synthase, N-terminal do 99.73
d1ea0a3422 Alpha subunit of glutamate synthase, N-terminal do 99.72
d1gph11 231 Glutamine PRPP amidotransferase, C-terminal domain 97.06
d1ecfa1 243 Glutamine PRPP amidotransferase, C-terminal domain 96.47
d1gph11231 Glutamine PRPP amidotransferase, C-terminal domain 95.95
d1ecfa1243 Glutamine PRPP amidotransferase, C-terminal domain 94.33
d1ea0a3422 Alpha subunit of glutamate synthase, N-terminal do 87.81
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ntn hydrolase-like
superfamily: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
family: Class II glutamine amidotransferases
domain: Glutamine PRPP amidotransferase, N-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=1.3e-42  Score=320.50  Aligned_cols=226  Identities=35%  Similarity=0.594  Sum_probs=199.7

Q ss_pred             eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240           22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT  101 (376)
Q Consensus        22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~  101 (376)
                      |||||+++...      +.+.+.+||.+|+|||||++|+++.++.   .+.++|..|.+.+......+.++.++++|||+
T Consensus         1 CGI~G~~~~~~------~~~~~~~~l~~lqhRG~Ds~Gi~~~~~~---~~~~~k~~g~~~~~~~~~~~~~~~g~~~igh~   71 (234)
T d1gph12           1 CGVFGIWGHEE------APQITYYGLHSLQHRGQEGAGIVATDGE---KLTAHKGQGLITEVFQNGELSKVKGKGAIGHV   71 (234)
T ss_dssp             CEEEEEESCTT------HHHHHHHHHHTTGGGCSSCEEEEEECSS---CEEEEEESSCHHHHTCSSSTTTCCCSEEEEEE
T ss_pred             CeEEEEECCcc------cHHHHHHHHHHhhcCCcccCcEEEEcCC---EEEEEecCCcccccchhhhcccCCCceeeeee
Confidence            99999998653      3467889999999999999999999874   88999999999988888888888999999999


Q ss_pred             ccccCCCCCCCCCCCceee-cCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240          102 RYSTSAASEEVNCQPFVVH-TAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA  180 (376)
Q Consensus       102 R~at~g~~~~~n~qPf~~~-~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~  180 (376)
                      ||+|+|..+..++||+... +..++++++|||+|+|+.+|+++|..+|+.+.++||+|++++++..+.      ...+.+
T Consensus        72 r~~t~g~~~~~~~~p~~~~~~~~~~~~lvhNG~I~N~~eL~~~l~~~g~~f~~~td~e~~~~~~~~~~------~~~~~~  145 (234)
T d1gph12          72 RYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSG------HFTLKD  145 (234)
T ss_dssp             CCCSSSCBCGGGSSCEEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTTCCBSSCCHHHHHHHHHHTCC------CSSHHH
T ss_pred             cccccCCchhccccccceeccccceEEEEecccccCHHHHHHHHHHcCCeeeeecchhHHHHHHHHHh------hhhHHH
Confidence            9999998888899998653 245689999999999999999999999999999999999999998872      567889


Q ss_pred             HHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhccc
Q psy240          181 RITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMG  259 (376)
Q Consensus       181 ~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~  259 (376)
                      ++..++++|+|+|||++++.+.++++||+.|.|||||+..                 ++.++| ||.           ++
T Consensus       146 ai~~~~~~l~G~~a~~i~~~~~~~~~rD~~G~~PL~~g~~-----------------~~~~~~aSE~-----------~a  197 (234)
T d1gph12         146 QIKNSLSMLKGAYAFLIMTETEMIVALDPNGLRPLSIGMM-----------------GDAYVVASET-----------CA  197 (234)
T ss_dssp             HHHHHHTTCCEEEEEEEECSSCEEEEECTTCCSCCEEEEE-----------------TTEEEEESST-----------HH
T ss_pred             HHHHHHHhcCCceEEEEeecCceeEEEcCCCCcCEEEEec-----------------CCEEEEEECH-----------HH
Confidence            9999999999999999999999999999999999999997                 578888 998           44


Q ss_pred             ccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEe
Q psy240          260 MISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIV  301 (376)
Q Consensus       260 ~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~  301 (376)
                      +..           ++++.+++|+|||+++|+.+|.++.+|-
T Consensus       198 l~~-----------~~~~~i~el~pGeii~i~~~g~~~~~~~  228 (234)
T d1gph12         198 FDV-----------VGATYLREVEPGEMLIINDEGMKSERFS  228 (234)
T ss_dssp             HHH-----------HTCEEEEECCTTEEEEEETTEEEEEESC
T ss_pred             Hhh-----------cCCcEEEEcCCCEEEEEeCCCCEEEeCC
Confidence            422           4577899999999999999998876654
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure