Psyllid ID: psy246
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | 2.2.26 [Sep-21-2011] | |||||||
| Q9I7S8 | 429 | Multifunctional protein A | yes | N/A | 0.665 | 0.953 | 0.405 | 1e-99 | |
| P38024 | 426 | Multifunctional protein A | yes | N/A | 0.668 | 0.964 | 0.366 | 5e-79 | |
| P51583 | 425 | Multifunctional protein A | yes | N/A | 0.564 | 0.816 | 0.418 | 8e-78 | |
| Q9DCL9 | 425 | Multifunctional protein A | yes | N/A | 0.564 | 0.816 | 0.415 | 5e-77 | |
| P22234 | 425 | Multifunctional protein A | yes | N/A | 0.564 | 0.816 | 0.418 | 1e-76 | |
| Q5RB59 | 425 | Multifunctional protein A | yes | N/A | 0.564 | 0.816 | 0.410 | 5e-75 | |
| Q10457 | 423 | Probable multifunctional | yes | N/A | 0.543 | 0.789 | 0.415 | 5e-68 | |
| A9B302 | 247 | Phosphoribosylaminoimidaz | yes | N/A | 0.396 | 0.987 | 0.315 | 1e-40 | |
| A7NKB4 | 249 | Phosphoribosylaminoimidaz | yes | N/A | 0.388 | 0.959 | 0.328 | 5e-40 | |
| Q54QE4 | 997 | Bifunctional purine synth | yes | N/A | 0.375 | 0.231 | 0.307 | 4e-33 |
| >sp|Q9I7S8|PUR6_DROME Multifunctional protein ADE2 OS=Drosophila melanogaster GN=ade5 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 217/535 (40%), Positives = 291/535 (54%), Gaps = 126/535 (23%)
Query: 76 VGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDIL 135
+G ++IEGKTK+++ L P ++++KDRITAGDG +AHDL GKAEI+ TN
Sbjct: 14 LGKVIIEGKTKQVYDLPEQPGLCLLLSKDRITAGDGVKAHDLAGKAEISNTTN------- 66
Query: 136 NAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRNLSNVTAEGLNQVKLNFTWIAD 195
QV+R L N+ + ++
Sbjct: 67 ---------------------------------GQVFRLL--------NEAGIRTAYVKQ 85
Query: 196 TLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPPCQET 255
A F+AR MIPIEWVTRRLATGS+LKR+ G E YRF PP QET
Sbjct: 86 CGAKA------------FIARKCQMIPIEWVTRRLATGSFLKRNVGVPEGYRFSPPKQET 133
Query: 256 FFKDDANHDPQWSDEQILSANLDNVARDEVQIMKRLSLVVFEILEKVWASLNCVLVDMKI 315
FFKDDANHDPQWS+EQI+SA FE LN +++
Sbjct: 134 FFKDDANHDPQWSEEQIVSAK-------------------FE--------LNGLVI---- 162
Query: 316 EFGIDNEGKVSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVDMKIEFGID 375
G D EV + EILE+ W + NC L+DMK+EFGI
Sbjct: 163 --GQD------------------EVDIMRRTTLLVFEILERAWQTKNCALIDMKVEFGIC 202
Query: 376 NEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYRNLSNVTAEGLNQVKLNFTWIADTLAS 435
++GNI+++D+IDSDSWRLWP G K LM DKQVYRNL++VTA L+ VK NF W+A+ LA
Sbjct: 203 DDGNIVLADIIDSDSWRLWPAGDKRLMVDKQVYRNLASVTASDLDTVKRNFIWVAEQLAD 262
Query: 436 VKRPTDNLVVLALGSSSDLPFANKIDDANHDPQWSDEQILSANLDNVARDEVQIMKRLSL 495
+ D+LVV+ +GS+SD+ + KI + + E +S+ + ++I++
Sbjct: 263 IVPKKDHLVVILMGSASDISHSEKIATSCRSLGLNVELRVSSAHKG-PEETLRIVREYES 321
Query: 496 VVFEILVMKSWSSGKNVVFIAVAGKSNGLGPVISGNTCYPVINCPPL--DSTGRDVWSSL 553
V+ N++F+AVAG+SNGLGPV+SG+T YPVINCPP+ D+ DVWSSL
Sbjct: 322 VM------------SNLIFVAVAGRSNGLGPVVSGSTNYPVINCPPVKSDNMQVDVWSSL 369
Query: 554 NLPAGIACSTVTAPSNAALAAAQILAQRDFFIWSKLRMYQTKLYIALNKEDKKSR 608
NLP+G+ C+TV P AAL AA IL +F +WSKLR+ +I L K DK+ R
Sbjct: 370 NLPSGLGCATVLYPEAAALHAATILGLGNFMVWSKLRVKALNNFITLKKADKELR 424
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Drosophila melanogaster (taxid: 7227) EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1 |
| >sp|P38024|PUR6_CHICK Multifunctional protein ADE2 OS=Gallus gallus GN=AIRC PE=2 SV=1 | Back alignment and function description |
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| >sp|P51583|PUR6_RAT Multifunctional protein ADE2 OS=Rattus norvegicus GN=Paics PE=2 SV=3 | Back alignment and function description |
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| >sp|Q9DCL9|PUR6_MOUSE Multifunctional protein ADE2 OS=Mus musculus GN=Paics PE=1 SV=4 | Back alignment and function description |
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| >sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens GN=PAICS PE=1 SV=3 | Back alignment and function description |
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| >sp|Q5RB59|PUR6_PONAB Multifunctional protein ADE2 OS=Pongo abelii GN=PAICS PE=2 SV=3 | Back alignment and function description |
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| >sp|Q10457|PUR6_CAEEL Probable multifunctional protein ADE2 OS=Caenorhabditis elegans GN=B0286.3 PE=1 SV=1 | Back alignment and function description |
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| >sp|A9B302|PUR7_HERA2 Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=purC PE=3 SV=1 | Back alignment and function description |
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| >sp|A7NKB4|PUR7_ROSCS Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=purC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q54QE4|PURCE_DICDI Bifunctional purine synthesis protein purC/E OS=Dictyostelium discoideum GN=purC/E PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | ||||||
| 91092272 | 424 | PREDICTED: similar to purine biosynthesi | 0.658 | 0.955 | 0.420 | 1e-101 | |
| 125981807 | 426 | GA17827 [Drosophila pseudoobscura pseudo | 0.658 | 0.950 | 0.404 | 2e-99 | |
| 195396707 | 430 | GJ16601 [Drosophila virilis] gi|19414673 | 0.665 | 0.951 | 0.4 | 2e-98 | |
| 195352702 | 428 | GM11535 [Drosophila sechellia] gi|194126 | 0.665 | 0.955 | 0.409 | 3e-98 | |
| 195478040 | 428 | ade5 [Drosophila yakuba] gi|194187910|gb | 0.665 | 0.955 | 0.405 | 9e-98 | |
| 18860083 | 429 | ade5, isoform A [Drosophila melanogaster | 0.665 | 0.953 | 0.405 | 1e-97 | |
| 442616143 | 428 | ade5, isoform B [Drosophila melanogaster | 0.665 | 0.955 | 0.403 | 3e-97 | |
| 195566448 | 428 | GD15919 [Drosophila simulans] gi|1942041 | 0.665 | 0.955 | 0.403 | 1e-96 | |
| 194895799 | 428 | GG19541 [Drosophila erecta] gi|190649994 | 0.665 | 0.955 | 0.401 | 2e-96 | |
| 194763997 | 426 | GF20891 [Drosophila ananassae] gi|190619 | 0.663 | 0.957 | 0.401 | 2e-95 |
| >gi|91092272|ref|XP_966432.1| PREDICTED: similar to purine biosynthesis protein 6, pur6 isoform 1 [Tribolium castaneum] gi|270001233|gb|EEZ97680.1| hypothetical protein TcasGA2_TC016225 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/533 (42%), Positives = 289/533 (54%), Gaps = 128/533 (24%)
Query: 76 VGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDIL 135
+G L+IEGKTK+++ L P+ +++NKDRITAGDG +AHDL GKA I+ KT
Sbjct: 12 LGALIIEGKTKQVYELPGSPDLCLLLNKDRITAGDGVKAHDLAGKAAISNKT-------- 63
Query: 136 NAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRNLSNVTAEGLNQVKLNFTWIAD 195
+ +V+ L++V VK +F A
Sbjct: 64 --------------------------------NGKVFEILNSV------GVKTSFVKAAS 85
Query: 196 TLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPPCQET 255
+A F+++ MIPIEWVTRRLATGS+LKR+PG E YRF PP ET
Sbjct: 86 DVA--------------FISKKCEMIPIEWVTRRLATGSFLKRNPGVPEGYRFFPPKHET 131
Query: 256 FFKDDANHDPQWSDEQILSANLDNVARDEVQIMKRLSLVVFEILEKVWASLNCVLVDMKI 315
FFKDDANHDPQWS EQI+SA
Sbjct: 132 FFKDDANHDPQWSSEQIISAKF-------------------------------------- 153
Query: 316 EFGIDNEGKVSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVDMKIEFGID 375
KV+ P EV + M + EILEKVWAS NC L+DMKIEFG+D
Sbjct: 154 --------KVNGLEIGPT-----EVDIMTRMSILVFEILEKVWASRNCALIDMKIEFGVD 200
Query: 376 NEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYRNLSNVTAEGLNQVKLNFTWIADTLAS 435
G ILV+DVIDSDSWRLWP G K LM DKQVYRNL+ VT+ L+ VK NF WI D L
Sbjct: 201 KSGEILVADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTSSDLDTVKRNFEWIVDQLDH 260
Query: 436 VKRPTDNLVVLALGSSSDLPFANKIDDANHDPQWSDE-QILSANLDNVARDEVQIMKRLS 494
+ P D+LVV+ +GS SD I + E ++ SA+ + ++I++
Sbjct: 261 LAPPNDHLVVILMGSPSDADHCKTIQKHCEKLGLNTELRVTSAH--KGTEETIKIIR--- 315
Query: 495 LVVFEILVMKSWSSGKNVVFIAVAGKSNGLGPVISGNTCYPVINCPPL--DSTGRDVWSS 552
+E L +K VVFIAVAG+SNGLGPV+SGN+ +PVINCPPL ++ RDVWSS
Sbjct: 316 --YYESLPLK-------VVFIAVAGRSNGLGPVVSGNSPFPVINCPPLKAENVDRDVWSS 366
Query: 553 LNLPAGIACSTVTAPSNAALAAAQILAQRDFFIWSKLRMYQTKLYIALNKEDK 605
LN+P+G+ CSTV P AAL+AA I+ ++ +WS+LR+ Q Y+ L K DK
Sbjct: 367 LNVPSGLGCSTVLYPEAAALSAANIIGLGNYVVWSRLRVRQLDNYVTLAKADK 419
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Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|125981807|ref|XP_001354907.1| GA17827 [Drosophila pseudoobscura pseudoobscura] gi|54643219|gb|EAL31963.1| GA17827 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
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| >gi|195396707|ref|XP_002056970.1| GJ16601 [Drosophila virilis] gi|194146737|gb|EDW62456.1| GJ16601 [Drosophila virilis] | Back alignment and taxonomy information |
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| >gi|195352702|ref|XP_002042850.1| GM11535 [Drosophila sechellia] gi|194126897|gb|EDW48940.1| GM11535 [Drosophila sechellia] | Back alignment and taxonomy information |
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| >gi|195478040|ref|XP_002100386.1| ade5 [Drosophila yakuba] gi|194187910|gb|EDX01494.1| ade5 [Drosophila yakuba] | Back alignment and taxonomy information |
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| >gi|18860083|ref|NP_572826.1| ade5, isoform A [Drosophila melanogaster] gi|74942758|sp|Q9I7S8.2|PUR6_DROME RecName: Full=Multifunctional protein ADE2; AltName: Full=Protein adenosine-5; Includes: RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; AltName: Full=SAICAR synthetase; Includes: RecName: Full=Phosphoribosylaminoimidazole carboxylase; AltName: Full=AIR carboxylase; Short=AIRC gi|6273741|gb|AAF06355.1|AF102579_1 5'-phosphoribosylaminoimidazole carboxylase-5'-phosphoribosyl-4-(N-succinocarboxamide)- 5-aminoimidazole synthetase [Drosophila melanogaster] gi|6273743|gb|AAF06356.1|AF102580_1 5'-phosphoribosylaminoimidazole carboxylase-5'-phosphoribosyl-4-(N-succinocarboxamide)- 5-aminoimidazole synthetase [Drosophila melanogaster] gi|20177098|gb|AAM12252.1| HL08006p [Drosophila melanogaster] gi|22832160|gb|AAG22346.2| ade5, isoform A [Drosophila melanogaster] gi|220946736|gb|ACL85911.1| ade5-PA [synthetic construct] gi|220960414|gb|ACL92743.1| ade5-PA [synthetic construct] | Back alignment and taxonomy information |
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| >gi|442616143|ref|NP_001259493.1| ade5, isoform B [Drosophila melanogaster] gi|324096486|gb|ADY17772.1| RH01319p [Drosophila melanogaster] gi|440216711|gb|AGB95335.1| ade5, isoform B [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|195566448|ref|XP_002106793.1| GD15919 [Drosophila simulans] gi|194204184|gb|EDX17760.1| GD15919 [Drosophila simulans] | Back alignment and taxonomy information |
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| >gi|194895799|ref|XP_001978345.1| GG19541 [Drosophila erecta] gi|190649994|gb|EDV47272.1| GG19541 [Drosophila erecta] | Back alignment and taxonomy information |
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| >gi|194763997|ref|XP_001964118.1| GF20891 [Drosophila ananassae] gi|190619043|gb|EDV34567.1| GF20891 [Drosophila ananassae] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | ||||||
| FB|FBgn0020513 | 429 | ade5 "ade5" [Drosophila melano | 0.398 | 0.571 | 0.454 | 5.1e-114 | |
| RGD|2323267 | 425 | LOC100359876 "multifunctional | 0.421 | 0.609 | 0.435 | 9e-99 | |
| RGD|620066 | 425 | Paics "phosphoribosylaminoimid | 0.421 | 0.609 | 0.435 | 9e-99 | |
| UNIPROTKB|Q2HJ26 | 425 | PAICS "Uncharacterized protein | 0.417 | 0.604 | 0.431 | 7.9e-98 | |
| UNIPROTKB|P22234 | 425 | PAICS "Multifunctional protein | 0.421 | 0.609 | 0.442 | 7.9e-98 | |
| MGI|MGI:1914304 | 425 | Paics "phosphoribosylaminoimid | 0.421 | 0.609 | 0.435 | 1.3e-97 | |
| UNIPROTKB|F1PPT7 | 450 | PAICS "Uncharacterized protein | 0.421 | 0.575 | 0.430 | 1.3e-97 | |
| UNIPROTKB|F1RTV5 | 428 | PAICS "Uncharacterized protein | 0.421 | 0.605 | 0.427 | 1.8e-96 | |
| UNIPROTKB|F1MN04 | 918 | PAICS "Uncharacterized protein | 0.417 | 0.279 | 0.426 | 5.9e-94 | |
| UNIPROTKB|E9PBS1 | 413 | PAICS "Phosphoribosylaminoimid | 0.403 | 0.600 | 0.441 | 1.4e-60 |
| FB|FBgn0020513 ade5 "ade5" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 119/262 (45%), Positives = 168/262 (64%)
Query: 350 LLEILEKVWASLNCVLVDMKIEFGIDNEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYR 409
+ EILE+ W + NC L+DMK+EFGI ++GNI+++D+IDSDSWRLWP G K LM DKQVYR
Sbjct: 177 VFEILERAWQTKNCALIDMKVEFGICDDGNIVLADIIDSDSWRLWPAGDKRLMVDKQVYR 236
Query: 410 NLSNVTAEGLNQVKLNFTWIADTLASVKRPTDNLVVLALGSSSDLPFANKIDDANHDPQW 469
NL++VTA L+ VK NF W+A+ LA + D+LVV+ +GS+SD+ + KI +
Sbjct: 237 NLASVTASDLDTVKRNFIWVAEQLADIVPKKDHLVVILMGSASDISHSEKIATSCRSLGL 296
Query: 470 SDE-QILSANLDNVARDEVQIMKRLSLVVFEILVMKSWSSGKNVVFIAVAGKSNGLGPVI 528
+ E ++ SA+ + ++I++ V+ N++F+AVAG+SNGLGPV+
Sbjct: 297 NVELRVSSAHKG--PEETLRIVREYESVM------------SNLIFVAVAGRSNGLGPVV 342
Query: 529 SGNTCYPVINCPPLDSTGR--DVWSSLNLPAGIACSTVTAPSNXXXXXXXXXXXRDFFIW 586
SG+T YPVINCPP+ S DVWSSLNLP+G+ C+TV P +F +W
Sbjct: 343 SGSTNYPVINCPPVKSDNMQVDVWSSLNLPSGLGCATVLYPEAAALHAATILGLGNFMVW 402
Query: 587 SKLRMYQTKLYIALNKEDKKSR 608
SKLR+ +I L K DK+ R
Sbjct: 403 SKLRVKALNNFITLKKADKELR 424
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| RGD|2323267 LOC100359876 "multifunctional protein ADE2-like" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| RGD|620066 Paics "phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2HJ26 PAICS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P22234 PAICS "Multifunctional protein ADE2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914304 Paics "phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PPT7 PAICS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RTV5 PAICS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MN04 PAICS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E9PBS1 PAICS "Phosphoribosylaminoimidazole carboxylase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P38024 | PUR6_CHICK | 4, ., 1, ., 1, ., 2, 1 | 0.3663 | 0.6682 | 0.9647 | yes | N/A |
| Q9I7S8 | PUR6_DROME | 4, ., 1, ., 1, ., 2, 1 | 0.4056 | 0.6650 | 0.9533 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.2.6 | 0.824 |
| 3rd Layer | 4.1.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 6.3.2 | 0.766 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 615 | |||
| cd01416 | 252 | cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidaz | 1e-89 | |
| pfam01259 | 243 | pfam01259, SAICAR_synt, SAICAR synthetase | 7e-44 | |
| cd00476 | 230 | cd00476, SAICAR_synt, 5-aminoimidazole-4-(N-succin | 2e-36 | |
| cd01416 | 252 | cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidaz | 1e-29 | |
| TIGR01162 | 156 | TIGR01162, purE, phosphoribosylaminoimidazole carb | 2e-27 | |
| cd01415 | 230 | cd01415, SAICAR_synt_PurC, bacterial and archaeal | 5e-27 | |
| PRK09362 | 238 | PRK09362, PRK09362, phosphoribosylaminoimidazole-s | 1e-26 | |
| pfam00731 | 150 | pfam00731, AIRC, AIR carboxylase | 9e-25 | |
| smart01001 | 152 | smart01001, AIRC, AIR carboxylase | 3e-22 | |
| COG0152 | 247 | COG0152, PurC, Phosphoribosylaminoimidazolesuccino | 1e-19 | |
| TIGR00081 | 237 | TIGR00081, purC, phosphoribosylaminoimidazole-succ | 3e-19 | |
| PRK09362 | 238 | PRK09362, PRK09362, phosphoribosylaminoimidazole-s | 7e-12 | |
| cd01416 | 252 | cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidaz | 1e-11 | |
| cd01415 | 230 | cd01415, SAICAR_synt_PurC, bacterial and archaeal | 2e-11 | |
| pfam01259 | 243 | pfam01259, SAICAR_synt, SAICAR synthetase | 4e-10 | |
| COG0041 | 162 | COG0041, PurE, Phosphoribosylcarboxyaminoimidazole | 6e-09 | |
| COG0152 | 247 | COG0152, PurC, Phosphoribosylaminoimidazolesuccino | 3e-07 | |
| cd01414 | 279 | cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimida | 5e-07 | |
| PRK09362 | 238 | PRK09362, PRK09362, phosphoribosylaminoimidazole-s | 7e-07 | |
| cd01415 | 230 | cd01415, SAICAR_synt_PurC, bacterial and archaeal | 2e-06 | |
| PRK09362 | 238 | PRK09362, PRK09362, phosphoribosylaminoimidazole-s | 3e-06 | |
| COG0152 | 247 | COG0152, PurC, Phosphoribosylaminoimidazolesuccino | 3e-06 | |
| cd01415 | 230 | cd01415, SAICAR_synt_PurC, bacterial and archaeal | 4e-06 | |
| cd00476 | 230 | cd00476, SAICAR_synt, 5-aminoimidazole-4-(N-succin | 6e-06 | |
| TIGR00081 | 237 | TIGR00081, purC, phosphoribosylaminoimidazole-succ | 2e-05 | |
| TIGR00081 | 237 | TIGR00081, purC, phosphoribosylaminoimidazole-succ | 5e-05 | |
| cd01414 | 279 | cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimida | 5e-05 | |
| PRK12607 | 313 | PRK12607, PRK12607, phosphoribosylaminoimidazole-s | 6e-04 | |
| pfam01259 | 243 | pfam01259, SAICAR_synt, SAICAR synthetase | 0.002 | |
| PRK13961 | 296 | PRK13961, PRK13961, phosphoribosylaminoimidazole-s | 0.004 |
| >gnl|CDD|133471 cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
Score = 278 bits (712), Expect = 1e-89
Identities = 133/366 (36%), Positives = 171/366 (46%), Gaps = 120/366 (32%)
Query: 75 NVGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDI 134
+G LIEGKTK ++ L P V++ +K D
Sbjct: 2 KLGKKLIEGKTKIVYELPDQPGLVLIQSK-----------------------------DR 32
Query: 135 LNAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRNLSNVTA-EGLNQVKLNFTWI 193
+ A G G RK+ ++ K N + E L + +
Sbjct: 33 ITA--------------------GDGARKDEIEGKAAISNKTTSNVFELLQEAGIK---- 68
Query: 194 ADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPPCQ 253
VK+ SPT F+AR MIPIEWV RR+ATGS+LKR+PG +E YRF PP
Sbjct: 69 ---THFVKQC-----SPTAFIARKCEMIPIEWVCRRIATGSFLKRNPGVKEGYRFSPPKL 120
Query: 254 ETFFKDDANHDPQWSDEQILSANLD----NVARDEVQIMKRLSLVVFEILEKVWASLNCV 309
E F+KDDANHDPQWS+EQ+L A L+ + + EV IM + ++ +FEILEK WA+ +C
Sbjct: 121 EFFYKDDANHDPQWSEEQLLEAKLNCGGLKIGKKEVDIMTKSTIAIFEILEKAWATQDCT 180
Query: 310 LVDMKIEFGIDNEGKVSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVDMK 369
LVDMKIEFG+D EIL
Sbjct: 181 LVDMKIEFGVDVTTG---------------------------EIL--------------- 198
Query: 370 IEFGIDNEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYRNLSNVTAEGLNQVKLNFTWI 429
++DVID+DSWRLWP G K LMKDKQVYRNL VT E L +VK N+ W+
Sbjct: 199 ------------LADVIDNDSWRLWPSGDKRLMKDKQVYRNLKEVTDEALQEVKKNYEWV 246
Query: 430 ADTLAS 435
AD L
Sbjct: 247 ADKLEL 252
|
Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate. Length = 252 |
| >gnl|CDD|216394 pfam01259, SAICAR_synt, SAICAR synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|133468 cd00476, SAICAR_synt, 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|133471 cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|130230 TIGR01162, purE, phosphoribosylaminoimidazole carboxylase, PurE protein | Back alignment and domain information |
|---|
| >gnl|CDD|133470 cd01415, SAICAR_synt_PurC, bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|181800 PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|144362 pfam00731, AIRC, AIR carboxylase | Back alignment and domain information |
|---|
| >gnl|CDD|214965 smart01001, AIRC, AIR carboxylase | Back alignment and domain information |
|---|
| >gnl|CDD|223230 COG0152, PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|232817 TIGR00081, purC, phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >gnl|CDD|181800 PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|133471 cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|133470 cd01415, SAICAR_synt_PurC, bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|216394 pfam01259, SAICAR_synt, SAICAR synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|223119 COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|223230 COG0152, PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|133469 cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|181800 PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|133470 cd01415, SAICAR_synt_PurC, bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|181800 PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223230 COG0152, PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|133470 cd01415, SAICAR_synt_PurC, bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|133468 cd00476, SAICAR_synt, 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|232817 TIGR00081, purC, phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >gnl|CDD|232817 TIGR00081, purC, phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >gnl|CDD|133469 cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >gnl|CDD|183621 PRK12607, PRK12607, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216394 pfam01259, SAICAR_synt, SAICAR synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|237571 PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| cd01416 | 252 | SAICAR_synt_Ade5 Ade5_like 5-aminoimidazole-4-(N-s | 100.0 | |
| PRK09362 | 238 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| cd01415 | 230 | SAICAR_synt_PurC bacterial and archaeal 5-aminoimi | 100.0 | |
| cd00476 | 230 | SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxam | 100.0 | |
| TIGR00081 | 237 | purC phosphoribosylaminoimidazole-succinocarboxami | 100.0 | |
| COG0152 | 247 | PurC Phosphoribosylaminoimidazolesuccinocarboxamid | 100.0 | |
| PRK13961 | 296 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| cd01414 | 279 | SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N- | 100.0 | |
| PRK12607 | 313 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| PF01259 | 248 | SAICAR_synt: SAICAR synthetase; InterPro: IPR00163 | 100.0 | |
| PLN02544 | 370 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| PRK13960 | 367 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| PRK13959 | 341 | phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| COG0041 | 162 | PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) m | 100.0 | |
| TIGR01162 | 156 | purE phosphoribosylaminoimidazole carboxylase, Pur | 100.0 | |
| TIGR02735 | 365 | purC_vibrio phosphoribosylaminoimidazole-succinoca | 100.0 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 100.0 | |
| KOG2835|consensus | 373 | 100.0 | ||
| PF00731 | 150 | AIRC: AIR carboxylase; InterPro: IPR000031 Phospho | 100.0 | |
| COG1691 | 254 | NCAIR mutase (PurE)-related proteins [General func | 99.95 | |
| TIGR02735 | 365 | purC_vibrio phosphoribosylaminoimidazole-succinoca | 99.93 | |
| cd01416 | 252 | SAICAR_synt_Ade5 Ade5_like 5-aminoimidazole-4-(N-s | 99.86 | |
| COG0152 | 247 | PurC Phosphoribosylaminoimidazolesuccinocarboxamid | 99.85 | |
| cd01415 | 230 | SAICAR_synt_PurC bacterial and archaeal 5-aminoimi | 99.83 | |
| PRK09362 | 238 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.82 | |
| KOG2835|consensus | 373 | 99.82 | ||
| TIGR00081 | 237 | purC phosphoribosylaminoimidazole-succinocarboxami | 99.78 | |
| cd00476 | 230 | SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxam | 99.74 | |
| PF01259 | 248 | SAICAR_synt: SAICAR synthetase; InterPro: IPR00163 | 99.67 | |
| PRK13961 | 296 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.58 | |
| cd01414 | 279 | SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N- | 99.56 | |
| PRK12607 | 313 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.55 | |
| PLN02544 | 370 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.45 | |
| PRK13960 | 367 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.33 | |
| PRK13959 | 341 | phosphoribosylaminoimidazole-succinocarboxamide sy | 99.13 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.61 | |
| cd08170 | 351 | GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox | 95.98 | |
| PRK00843 | 350 | egsA NAD(P)-dependent glycerol-1-phosphate dehydro | 95.57 | |
| cd08550 | 349 | GlyDH-like Glycerol_dehydrogenase-like. Families o | 95.45 | |
| cd08171 | 345 | GlyDH-like2 Glycerol dehydrogenase-like. Glycerol | 95.26 | |
| PRK09423 | 366 | gldA glycerol dehydrogenase; Provisional | 94.99 | |
| cd08551 | 370 | Fe-ADH iron-containing alcohol dehydrogenases (Fe- | 94.98 | |
| cd08185 | 380 | Fe-ADH1 Iron-containing alcohol dehydrogenases-lik | 94.88 | |
| cd08173 | 339 | Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro | 94.32 | |
| cd08182 | 367 | HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) c | 94.3 | |
| cd08194 | 375 | Fe-ADH6 Iron-containing alcohol dehydrogenases-lik | 94.19 | |
| cd08193 | 376 | HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyze | 94.15 | |
| cd08187 | 382 | BDH Butanol dehydrogenase catalyzes the conversion | 94.13 | |
| cd08186 | 383 | Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ | 94.1 | |
| cd07766 | 332 | DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) | 93.99 | |
| TIGR01357 | 344 | aroB 3-dehydroquinate synthase. This model represe | 93.97 | |
| cd08175 | 348 | G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) c | 93.94 | |
| cd08199 | 354 | EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi- | 93.8 | |
| cd08183 | 374 | Fe-ADH2 Iron-containing alcohol dehydrogenases-lik | 93.67 | |
| cd08195 | 345 | DHQS Dehydroquinate synthase (DHQS) catalyzes the | 93.6 | |
| cd08176 | 377 | LPO Lactadehyde:propanediol oxidoreductase (LPO) c | 93.52 | |
| cd08192 | 370 | Fe-ADH7 Iron-containing alcohol dehydrogenases-lik | 93.17 | |
| TIGR02638 | 379 | lactal_redase lactaldehyde reductase. This clade o | 93.15 | |
| cd08177 | 337 | MAR Maleylacetate reductase is involved in many ar | 92.96 | |
| PRK00002 | 358 | aroB 3-dehydroquinate synthase; Reviewed | 92.88 | |
| PRK09860 | 383 | putative alcohol dehydrogenase; Provisional | 92.75 | |
| cd08181 | 357 | PPD-like 1,3-propanediol dehydrogenase-like (PPD). | 92.63 | |
| cd08172 | 347 | GlyDH-like1 Glycerol dehydrogenases-like. Glycerol | 92.63 | |
| cd08549 | 332 | G1PDH_related Glycerol-1-phosphate_dehydrogenase a | 92.62 | |
| cd08189 | 374 | Fe-ADH5 Iron-containing alcohol dehydrogenases-lik | 92.61 | |
| cd08178 | 398 | AAD_C C-terminal alcohol dehydrogenase domain of t | 92.47 | |
| PRK10586 | 362 | putative oxidoreductase; Provisional | 92.15 | |
| COG0371 | 360 | GldA Glycerol dehydrogenase and related enzymes [E | 92.12 | |
| cd08191 | 386 | HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyz | 92.02 | |
| PRK15454 | 395 | ethanol dehydrogenase EutG; Provisional | 91.94 | |
| cd08174 | 331 | G1PDH-like Glycerol-1-phosphate dehydrogenase-like | 91.84 | |
| cd08179 | 375 | NADPH_BDH NADPH-dependent butanol dehydrogenase in | 91.81 | |
| cd08197 | 355 | DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly | 91.17 | |
| PRK10624 | 382 | L-1,2-propanediol oxidoreductase; Provisional | 91.15 | |
| cd08180 | 332 | PDD 1,3-propanediol dehydrogenase (PPD) catalyzes | 90.76 | |
| cd08169 | 344 | DHQ-like Dehydroquinate synthase-like which includ | 90.74 | |
| PF13685 | 250 | Fe-ADH_2: Iron-containing alcohol dehydrogenase; P | 90.44 | |
| cd08188 | 377 | Fe-ADH4 Iron-containing alcohol dehydrogenases-lik | 90.22 | |
| PF00465 | 366 | Fe-ADH: Iron-containing alcohol dehydrogenase ; In | 89.78 | |
| cd08190 | 414 | HOT Hydroxyacid-oxoacid transhydrogenase (HOT) inv | 89.65 | |
| PRK15138 | 387 | aldehyde reductase; Provisional | 88.97 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 88.62 | |
| PRK14021 | 542 | bifunctional shikimate kinase/3-dehydroquinate syn | 88.26 | |
| COG3199 | 355 | Predicted inorganic polyphosphate/ATP-NAD kinase [ | 87.77 | |
| PRK00286 | 438 | xseA exodeoxyribonuclease VII large subunit; Revie | 87.18 | |
| cd08196 | 346 | DHQS-like1 Dehydroquinate synthase (DHQS)-like. DH | 85.71 | |
| COG1454 | 377 | EutG Alcohol dehydrogenase, class IV [Energy produ | 85.55 | |
| TIGR00237 | 432 | xseA exodeoxyribonuclease VII, large subunit. This | 84.89 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 83.93 | |
| cd08184 | 347 | Fe-ADH3 Iron-containing alcohol dehydrogenases-lik | 81.87 | |
| PF02222 | 172 | ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T | 80.67 |
| >cd01416 SAICAR_synt_Ade5 Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-67 Score=532.15 Aligned_cols=246 Identities=58% Similarity=1.019 Sum_probs=228.7
Q ss_pred cCccccccccccceeeeccCCCCeEEEEEccCccccCCcccccccchHHHhHHHHHHHHHHHhccccccceeccCcceee
Q psy246 9 KNVGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNASENVGDLLIEGKTKKI 88 (615)
Q Consensus 9 m~~~~llyEGKaK~Vy~~~~dp~~vll~fKDdiTA~ng~kk~~i~GKG~lnn~iSs~iF~~L~~~evv~RniaaGs~kkr 88 (615)
|+.+++|||||||+||+++++|+.++++|||++|||||+++++|+|||.+||+||+++|++|++.
T Consensus 1 ~~~~~~lyeGK~K~iY~~~~~~~~li~~fkD~~sAfd~~~~~~I~gKG~~~~~is~~~F~~L~~~--------------- 65 (252)
T cd01416 1 LKLGKKLIEGKTKIVYELPDQPGLVLIQSKDRITAGDGARKDEIEGKAAISNKTTSNVFELLQEA--------------- 65 (252)
T ss_pred CcccccccccCceEEEecCCCCCEEEEEEeCCCcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhC---------------
Confidence 45678999999999999756789999999999999999999999999999999999999988853
Q ss_pred eecCCCCCCCeEEeccccccCCccCccchhhHHHHHHHHHHHHHHHHHhccccceeccCCCccccCCCCCCCCccccccc
Q psy246 89 HLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNAAEMSMIKYSEENEYDKIPPGGSGLRKELMKD 168 (615)
Q Consensus 89 y~lKdD~~~dpli~~D~i~A~d~a~~~eI~~k~el~~kin~~lfe~le~~gi~LaDeIspDt~RlWd~~~~~i~T~~~lD 168 (615)
| |+|
T Consensus 66 --------------------------------------------------G---------------------I~t----- 69 (252)
T cd01416 66 --------------------------------------------------G---------------------IKT----- 69 (252)
T ss_pred --------------------------------------------------C---------------------CCc-----
Confidence 6 778
Q ss_pred ccccccCcccchhhhhhhhhhhhhhhhcccccCCCCCCccCCCeEEEeeeeeeeeEEEeeceeeccccccCCCCcccccC
Q psy246 169 KQVYRNLSNVTAEGLNQVKLNFTWIADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRF 248 (615)
Q Consensus 169 Kd~fRdLg~v~~~y~e~vk~hf~wva~~~~~v~~~~~~~~~~~~~l~~~~~~iPlE~v~R~~a~GS~~~r~~g~~~g~~l 248 (615)
|| + +.+++++|+||+|+|||||||||||||||+|+||+|+++|++|
T Consensus 70 --------------------Hf---------i-----~~~~~~~~lvkk~~~iPlEvIvR~~a~GS~~kry~g~~eg~~l 115 (252)
T cd01416 70 --------------------HF---------V-----KQCSPTAFIARKCEMIPIEWVCRRIATGSFLKRNPGVKEGYRF 115 (252)
T ss_pred --------------------ee---------e-----cccCCCeEEEEEeeeeeEEEEEEeeeecchHhhcCCCCCcccC
Confidence 99 7 4568999999999999999999999999999999999999999
Q ss_pred CCCceeeeecCCCCCCCCCCHHHHHhccC--CC--CCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeeEeeecCCCCC
Q psy246 249 CPPCQETFFKDDANHDPQWSDEQILSANL--DN--VARDEVQIMKRLSLVVFEILEKVWASLNCVLVDMKIEFGIDNEGK 324 (615)
Q Consensus 249 ~~Pi~e~~~K~d~~~D~~i~~~~~~~~~~--~~--~~~~e~~~~~~~~~~v~~~l~~~~~~~g~~lvD~K~Efg~~~~~~ 324 (615)
++|++||+||+|+.|||+||++|++++|+ .. +++++++.|+++|++||++++++|+++|++|||||+|||+
T Consensus 116 ~~PivE~~~K~d~~~Dp~I~~~~~~~~~~~~~~~~~t~~e~~~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~----- 190 (252)
T cd01416 116 SPPKLEFFYKDDANHDPQWSEEQLLEAKLNCGGLKIGKKEVDIMTKSTIAIFEILEKAWATQDCTLVDMKIEFGV----- 190 (252)
T ss_pred CCCeeeEEeeCCCCCCCCCCHHHHHHcCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeeE-----
Confidence 99999999999999999999999999884 12 8999999999999999999999999999999999999994
Q ss_pred cccCCCCccchhhhhhccccchhhHHHHHHHHHHhhhhhhhhcceeeeeecCC-CCEEEEecccCCCcccccCCCccccc
Q psy246 325 VSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVDMKIEFGIDNE-GNILVSDVIDSDSWRLWPEGKKELMK 403 (615)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvd~~~~~g~~~~-g~ivLaD~itpDs~Rlw~~~~~~~~~ 403 (615)
+.+ |+|+|+|||||||||||+.++++.++
T Consensus 191 --------------------------------------------------~~~~g~ivL~DEisPDs~RlW~~~~~~~~l 220 (252)
T cd01416 191 --------------------------------------------------DVTTGEILLADVIDNDSWRLWPSGDKRLMK 220 (252)
T ss_pred --------------------------------------------------eCCCCeEEEEEEECCCceeeeECCCCCccC
Confidence 445 99999999999999999999988889
Q ss_pred ccccccccccccccccchhhhhHHHHHHHhh
Q psy246 404 DKQVYRNLSNVTAEGLNQVKLNFTWIADTLA 434 (615)
Q Consensus 404 DKq~~R~~~~~~~~~l~~VkenY~eVA~~L~ 434 (615)
|||+||+|..++...++.|+.||.|++..+.
T Consensus 221 DK~~~R~~~~~~~~~~~~v~~~~~~~~~~~~ 251 (252)
T cd01416 221 DKQVYRNLKEVTDEALQEVKKNYEWVADKLE 251 (252)
T ss_pred CcHHHhcCcccchHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998653
|
Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate. |
| >PRK09362 phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >cd01415 SAICAR_synt_PurC bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >TIGR00081 purC phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >COG0152 PurC Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13961 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >cd01414 SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >PRK12607 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >PF01259 SAICAR_synt: SAICAR synthetase; InterPro: IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase (6 | Back alignment and domain information |
|---|
| >PLN02544 phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >PRK13960 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK13959 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein | Back alignment and domain information |
|---|
| >TIGR02735 purC_vibrio phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type | Back alignment and domain information |
|---|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
| >KOG2835|consensus | Back alignment and domain information |
|---|
| >PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE | Back alignment and domain information |
|---|
| >COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02735 purC_vibrio phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type | Back alignment and domain information |
|---|
| >cd01416 SAICAR_synt_Ade5 Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >COG0152 PurC Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd01415 SAICAR_synt_PurC bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >PRK09362 phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed | Back alignment and domain information |
|---|
| >KOG2835|consensus | Back alignment and domain information |
|---|
| >TIGR00081 purC phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >PF01259 SAICAR_synt: SAICAR synthetase; InterPro: IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase (6 | Back alignment and domain information |
|---|
| >PRK13961 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >cd01414 SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase | Back alignment and domain information |
|---|
| >PRK12607 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02544 phosphoribosylaminoimidazole-succinocarboxamide synthase | Back alignment and domain information |
|---|
| >PRK13960 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK13959 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional | Back alignment and domain information |
|---|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation | Back alignment and domain information |
|---|
| >PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >cd08550 GlyDH-like Glycerol_dehydrogenase-like | Back alignment and domain information |
|---|
| >cd08171 GlyDH-like2 Glycerol dehydrogenase-like | Back alignment and domain information |
|---|
| >PRK09423 gldA glycerol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like | Back alignment and domain information |
|---|
| >cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme | Back alignment and domain information |
|---|
| >cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) | Back alignment and domain information |
|---|
| >cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor | Back alignment and domain information |
|---|
| >cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process | Back alignment and domain information |
|---|
| >cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase | Back alignment and domain information |
|---|
| >cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) | Back alignment and domain information |
|---|
| >TIGR01357 aroB 3-dehydroquinate synthase | Back alignment and domain information |
|---|
| >cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner | Back alignment and domain information |
|---|
| >cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS) | Back alignment and domain information |
|---|
| >cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis | Back alignment and domain information |
|---|
| >cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria | Back alignment and domain information |
|---|
| >cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway | Back alignment and domain information |
|---|
| >TIGR02638 lactal_redase lactaldehyde reductase | Back alignment and domain information |
|---|
| >cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes | Back alignment and domain information |
|---|
| >PRK00002 aroB 3-dehydroquinate synthase; Reviewed | Back alignment and domain information |
|---|
| >PRK09860 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) | Back alignment and domain information |
|---|
| >cd08172 GlyDH-like1 Glycerol dehydrogenases-like | Back alignment and domain information |
|---|
| >cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins | Back alignment and domain information |
|---|
| >cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD) | Back alignment and domain information |
|---|
| >PRK10586 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate | Back alignment and domain information |
|---|
| >PRK15454 ethanol dehydrogenase EutG; Provisional | Back alignment and domain information |
|---|
| >cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like | Back alignment and domain information |
|---|
| >cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria | Back alignment and domain information |
|---|
| >cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics | Back alignment and domain information |
|---|
| >PRK10624 L-1,2-propanediol oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism | Back alignment and domain information |
|---|
| >cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase | Back alignment and domain information |
|---|
| >PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C | Back alignment and domain information |
|---|
| >cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
| >cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism | Back alignment and domain information |
|---|
| >PRK15138 aldehyde reductase; Provisional | Back alignment and domain information |
|---|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional | Back alignment and domain information |
|---|
| >COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed | Back alignment and domain information |
|---|
| >cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like | Back alignment and domain information |
|---|
| >COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR00237 xseA exodeoxyribonuclease VII, large subunit | Back alignment and domain information |
|---|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 615 | ||||
| 4ja0_A | 425 | Crystal Structure Of The Invertebrate Bi-functional | 2e-87 | ||
| 2h31_A | 425 | Crystal Structure Of Human Paics, A Bifunctional Ca | 3e-71 | ||
| 2gqs_A | 237 | Saicar Synthetase Complexed With Cair-Mg2+ And Adp | 2e-12 | ||
| 2yzl_A | 242 | Crystal Structure Of Phosphoribosylaminoimidazole- | 5e-12 | ||
| 2yzl_A | 242 | Crystal Structure Of Phosphoribosylaminoimidazole- | 2e-08 | ||
| 2ywv_A | 244 | Crystal Structure Of Saicar Synthetase From Geobaci | 6e-12 | ||
| 2gqr_A | 237 | Saicar Synthetase Complexed With Adp-Mg2+ Length = | 6e-11 | ||
| 3u55_A | 238 | Crystal Structure (Type-2) Of Saicar Synthetase Fro | 2e-10 | ||
| 3u55_A | 238 | Crystal Structure (Type-2) Of Saicar Synthetase Fro | 1e-05 | ||
| 3u54_A | 238 | Crystal Structure (Type-1) Of Saicar Synthetase Fro | 1e-09 | ||
| 3u54_A | 238 | Crystal Structure (Type-1) Of Saicar Synthetase Fro | 1e-05 | ||
| 3kre_A | 263 | Crystal Structure Of Phosphoribosylaminoimidazole-s | 1e-09 | ||
| 3nua_A | 238 | Crystal Structure Of Phosphoribosylaminoimidazole-S | 9e-08 | ||
| 3rg8_A | 159 | Crystal Structure Of Treponema Denticola Pure Lengt | 5e-06 | ||
| 3rgg_A | 159 | Crystal Structure Of Treponema Denticola Pure Bound | 5e-06 | ||
| 1kut_A | 230 | Structural Genomics, Protein Tm1243, (Saicar Synthe | 1e-05 | ||
| 1kut_A | 230 | Structural Genomics, Protein Tm1243, (Saicar Synthe | 3e-04 |
| >pdb|4JA0|A Chain A, Crystal Structure Of The Invertebrate Bi-functional Purine Biosynthesis Enzyme Paics At 2.8 A Resolution Length = 425 | Back alignment and structure |
|
| >pdb|2H31|A Chain A, Crystal Structure Of Human Paics, A Bifunctional Carboxylase And Synthetase In Purine Biosynthesis Length = 425 | Back alignment and structure |
| >pdb|2GQS|A Chain A, Saicar Synthetase Complexed With Cair-Mg2+ And Adp Length = 237 | Back alignment and structure |
| >pdb|2YZL|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii Length = 242 | Back alignment and structure |
| >pdb|2YZL|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii Length = 242 | Back alignment and structure |
| >pdb|2YWV|A Chain A, Crystal Structure Of Saicar Synthetase From Geobacillus Kaustophilus Length = 244 | Back alignment and structure |
| >pdb|2GQR|A Chain A, Saicar Synthetase Complexed With Adp-Mg2+ Length = 237 | Back alignment and structure |
| >pdb|3U55|A Chain A, Crystal Structure (Type-2) Of Saicar Synthetase From Pyrococcus Horikoshii Ot3 Length = 238 | Back alignment and structure |
| >pdb|3U55|A Chain A, Crystal Structure (Type-2) Of Saicar Synthetase From Pyrococcus Horikoshii Ot3 Length = 238 | Back alignment and structure |
| >pdb|3U54|A Chain A, Crystal Structure (Type-1) Of Saicar Synthetase From Pyrococcus Horikoshii Ot3 Length = 238 | Back alignment and structure |
| >pdb|3U54|A Chain A, Crystal Structure (Type-1) Of Saicar Synthetase From Pyrococcus Horikoshii Ot3 Length = 238 | Back alignment and structure |
| >pdb|3KRE|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole-succinocarboxamide Synthase From Ehrlichia Chaffeensis At 1.8a Resolution Length = 263 | Back alignment and structure |
| >pdb|3NUA|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Clostridium Perfringens Length = 238 | Back alignment and structure |
| >pdb|3RG8|A Chain A, Crystal Structure Of Treponema Denticola Pure Length = 159 | Back alignment and structure |
| >pdb|3RGG|A Chain A, Crystal Structure Of Treponema Denticola Pure Bound To Air Length = 159 | Back alignment and structure |
| >pdb|1KUT|A Chain A, Structural Genomics, Protein Tm1243, (Saicar Synthetase) Length = 230 | Back alignment and structure |
| >pdb|1KUT|A Chain A, Structural Genomics, Protein Tm1243, (Saicar Synthetase) Length = 230 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} Length = 425 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = 1e-95
Identities = 191/548 (34%), Positives = 259/548 (47%), Gaps = 142/548 (25%)
Query: 75 NVGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDI 134
N+G L EGKTK+++ L P V++ +KD+IT
Sbjct: 8 NIGKKLYEGKTKEVYELLDSPGKVLLQSKDQIT--------------------------- 40
Query: 135 LNAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRN-LSNVTAEGLNQ--VKLNFT 191
G+ RK ++ K N +++ + L + +K F
Sbjct: 41 ----------------------AGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAF- 77
Query: 192 WIADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPP 251
++ T F+A MIPIEWV RR+ATGS+LKR+PG +E Y+F PP
Sbjct: 78 --------TRK-----CGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPP 124
Query: 252 CQETFFKDDANHDPQWSDEQILSANLDN----VARDEVQIMKRLSLVVFEILEKVWASLN 307
E FFKDDAN+DPQWS+EQ+++A + + EV IM + +FEILEK W N
Sbjct: 125 KVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQN 184
Query: 308 CVLVDMKIEFGIDNEGKVSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVD 367
C LVDMKIEFG+D
Sbjct: 185 CTLVDMKIEFGVDVT--------------------------------------------T 200
Query: 368 MKIEFGIDNEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYRNLSNVTAEGLNQVKLNFT 427
+I +++DVID+DSWRLWP G + KDKQ YR+L VT EGL VK NF
Sbjct: 201 KEI----------VLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFE 250
Query: 428 W-IADTLASVKRPTDNLVVLALGSSSDLPFANKIDDANHDPQWSDE-QILSANLDNVARD 485
W +K + VV+ +GS+SDL KI A + E ++ SA+
Sbjct: 251 WVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAH------- 303
Query: 486 EVQIMKRLSLVVFEILVMKSWSSGKNVVFIAVAGKSNGLGPVISGNTCYPVINCPPL--D 543
+ I + G VF+AVAG+SNGLGPV+SGNT YPVI+CPPL D
Sbjct: 304 ------KGPDETLRIKA-EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPD 356
Query: 544 STGRDVWSSLNLPAGIACSTVTAPSNAALAAAQILAQRDFFIWSKLRMYQTKLYIALNKE 603
+DVWSSL LP+G+ CSTV +P +A AAQI + +WSKLR +I+L +
Sbjct: 357 WGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQA 416
Query: 604 DKKSRQEN 611
DKK R+ N
Sbjct: 417 DKKIRECN 424
|
| >2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} Length = 425 | Back alignment and structure |
|---|
| >2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* Length = 242 | Back alignment and structure |
|---|
| >2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* Length = 242 | Back alignment and structure |
|---|
| >2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* Length = 242 | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 Length = 230 | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 Length = 230 | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 Length = 230 | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 Length = 230 | Back alignment and structure |
|---|
| >2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* Length = 237 | Back alignment and structure |
|---|
| >2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* Length = 237 | Back alignment and structure |
|---|
| >2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* Length = 237 | Back alignment and structure |
|---|
| >2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} Length = 244 | Back alignment and structure |
|---|
| >2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} Length = 244 | Back alignment and structure |
|---|
| >2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} Length = 244 | Back alignment and structure |
|---|
| >3kre_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.80A {Ehrlichia chaffeensis str} Length = 263 | Back alignment and structure |
|---|
| >3kre_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.80A {Ehrlichia chaffeensis str} Length = 263 | Back alignment and structure |
|---|
| >3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} Length = 238 | Back alignment and structure |
|---|
| >3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} Length = 238 | Back alignment and structure |
|---|
| >3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} Length = 238 | Back alignment and structure |
|---|
| >3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} PDB: 3rgg_A* Length = 159 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii} Length = 157 | Back alignment and structure |
|---|
| >3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii} Length = 169 | Back alignment and structure |
|---|
| >1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1 Length = 183 | Back alignment and structure |
|---|
| >3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} Length = 174 | Back alignment and structure |
|---|
| >3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} PDB: 3opq_A* Length = 166 | Back alignment and structure |
|---|
| >3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
| >1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1 Length = 170 | Back alignment and structure |
|---|
| >4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis} Length = 181 | Back alignment and structure |
|---|
| >3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* Length = 174 | Back alignment and structure |
|---|
| >1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A Length = 182 | Back alignment and structure |
|---|
| >3r9r_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid; 1.85A {Mycobacterium abscessus} Length = 301 | Back alignment and structure |
|---|
| >3r9r_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid; 1.85A {Mycobacterium abscessus} Length = 301 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| 2h31_A | 425 | Multifunctional protein ADE2; alpha-beta-alpha, li | 100.0 | |
| 3kre_A | 263 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 100.0 | |
| 2gqr_A | 237 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| 3nua_A | 238 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 100.0 | |
| 2ywv_A | 244 | Phosphoribosylaminoimidazole succinocarboxamide S; | 100.0 | |
| 2z02_A | 242 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| 1kut_A | 230 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| 3u55_A | 238 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 100.0 | |
| 2cnq_A | 306 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 100.0 | |
| 3r9r_A | 301 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 100.0 | |
| 3rg8_A | 159 | Phosphoribosylaminoimidazole carboxylase, PURE PR; | 100.0 | |
| 3lp6_A | 174 | Phosphoribosylaminoimidazole carboxylase catalyti; | 100.0 | |
| 3trh_A | 169 | Phosphoribosylaminoimidazole carboxylase carboxylt | 100.0 | |
| 3ors_A | 163 | N5-carboxyaminoimidazole ribonucleotide mutase; is | 100.0 | |
| 1o4v_A | 183 | Phosphoribosylaminoimidazole mutase PURE; structur | 100.0 | |
| 1xmp_A | 170 | PURE, phosphoribosylaminoimidazole carboxylase; pu | 100.0 | |
| 4b4k_A | 181 | N5-carboxyaminoimidazole ribonucleotide mutase; is | 100.0 | |
| 1u11_A | 182 | PURE (N5-carboxyaminoimidazole ribonucleotide MUT; | 100.0 | |
| 3kuu_A | 174 | Phosphoribosylaminoimidazole carboxylase catalyti | 100.0 | |
| 3oow_A | 166 | Phosphoribosylaminoimidazole carboxylase,catalyic; | 100.0 | |
| 2ywx_A | 157 | Phosphoribosylaminoimidazole carboxylase catalyti; | 100.0 | |
| 4grd_A | 173 | N5-CAIR mutase, phosphoribosylaminoimidazole carbo | 100.0 | |
| 3nua_A | 238 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 99.85 | |
| 3kre_A | 263 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 99.85 | |
| 2z02_A | 242 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 99.84 | |
| 2gqr_A | 237 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 99.83 | |
| 2ywv_A | 244 | Phosphoribosylaminoimidazole succinocarboxamide S; | 99.83 | |
| 1kut_A | 230 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 99.82 | |
| 3u55_A | 238 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 99.79 | |
| 2h31_A | 425 | Multifunctional protein ADE2; alpha-beta-alpha, li | 99.78 | |
| 2cnq_A | 306 | Phosphoribosylaminoimidazole-succinocarboxamide sy | 99.54 | |
| 3r9r_A | 301 | Phosphoribosylaminoimidazole-succinocarboxamide S; | 99.46 | |
| 3uhj_A | 387 | Probable glycerol dehydrogenase; structural genomi | 95.7 | |
| 1o2d_A | 371 | Alcohol dehydrogenase, iron-containing; TM0920, st | 95.3 | |
| 1jq5_A | 370 | Glycerol dehydrogenase; oxidoreductase, NAD, glyce | 95.25 | |
| 3bfj_A | 387 | 1,3-propanediol oxidoreductase; opportunistic path | 94.81 | |
| 3ox4_A | 383 | Alcohol dehydrogenase 2; iron, NAD, oxidoreductase | 94.5 | |
| 3hl0_A | 353 | Maleylacetate reductase; structur genomics, PSI-2, | 94.01 | |
| 1ta9_A | 450 | Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosa | 93.6 | |
| 3jzd_A | 358 | Iron-containing alcohol dehydrogenase; YP_298327.1 | 93.44 | |
| 1rrm_A | 386 | Lactaldehyde reductase; structural genomics, dehyd | 93.18 | |
| 1vlj_A | 407 | NADH-dependent butanol dehydrogenase; TM0820, stru | 93.0 | |
| 1oj7_A | 408 | Hypothetical oxidoreductase YQHD; structural genom | 92.72 | |
| 3okf_A | 390 | 3-dehydroquinate synthase; structural genomics, ce | 92.47 | |
| 1sg6_A | 393 | Pentafunctional AROM polypeptide; shikimate pathwa | 92.46 | |
| 3ce9_A | 354 | Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin | 92.14 | |
| 2gru_A | 368 | 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2 | 90.35 | |
| 3iv7_A | 364 | Alcohol dehydrogenase IV; NP_602249.1, iron-contai | 89.16 | |
| 1xah_A | 354 | Sadhqs, 3-dehydroquinate synthase; shikimate pathw | 88.57 | |
| 1kq3_A | 376 | Glycerol dehydrogenase; structural genomics, joint | 87.92 | |
| 3rf7_A | 375 | Iron-containing alcohol dehydrogenase; structural | 87.76 | |
| 3kke_A | 303 | LACI family transcriptional regulator; structural | 85.0 | |
| 3qbe_A | 368 | 3-dehydroquinate synthase; shikimate pathway, myco | 84.5 | |
| 3clh_A | 343 | 3-dehydroquinate synthase; shikimate pathway, arom | 84.19 | |
| 3l49_A | 291 | ABC sugar (ribose) transporter, periplasmic substr | 84.17 | |
| 3m9w_A | 313 | D-xylose-binding periplasmic protein; xylose bindi | 83.4 | |
| 1ujn_A | 348 | Dehydroquinate synthase; riken structu genomics/pr | 82.17 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 81.52 | |
| 3egc_A | 291 | Putative ribose operon repressor; structural genom | 81.1 | |
| 3l6u_A | 293 | ABC-type sugar transport system periplasmic compo; | 80.05 |
| >2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-116 Score=938.69 Aligned_cols=410 Identities=48% Similarity=0.811 Sum_probs=353.2
Q ss_pred cccCccccccccccceeeeccCCCCeEEEEEccCccccCCcccccccchHHHhHHHHHHHHHHHhccccccceeccCcce
Q psy246 7 LTKNVGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNASENVGDLLIEGKTK 86 (615)
Q Consensus 7 ~~m~~~~llyEGKaK~Vy~~~~dp~~vll~fKDdiTA~ng~kk~~i~GKG~lnn~iSs~iF~~L~~~evv~RniaaGs~k 86 (615)
..|+++++|||||+|+||+++++|+.++++|||++|||||+++++|+|||++||+||+++|++|+
T Consensus 5 ~~m~~~~~lyeGKvK~vY~~~d~~~~ll~~~kDriSAfD~~~~~~IpgKG~vln~iS~~~F~~L~--------------- 69 (425)
T 2h31_A 5 EVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQ--------------- 69 (425)
T ss_dssp --CCCCCCCCBCSSCEEECCTTSCSSCEEEEC---------------CCHHHHHHHHHHHHHHHH---------------
T ss_pred cccccCCccccCCCeEEeccCCCCCEEEEEEeCCCCCCCcccCCCcCcccHHHHHHHHHHHHHHH---------------
Confidence 56778899999999999996467899999999999999999999999999999999999999887
Q ss_pred eeeecCCCCCCCeEEeccccccCCccCccchhhHHHHHHHHHHHHHHHHHhccccceeccCCCccccCCCCCCCCccccc
Q psy246 87 KIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNAAEMSMIKYSEENEYDKIPPGGSGLRKELM 166 (615)
Q Consensus 87 kry~lKdD~~~dpli~~D~i~A~d~a~~~eI~~k~el~~kin~~lfe~le~~gi~LaDeIspDt~RlWd~~~~~i~T~~~ 166 (615)
+.| |+|
T Consensus 70 --------------------------------------------------~~g---------------------ipt--- 75 (425)
T 2h31_A 70 --------------------------------------------------EAG---------------------IKT--- 75 (425)
T ss_dssp --------------------------------------------------HHT---------------------CCB---
T ss_pred --------------------------------------------------hCC---------------------CCc---
Confidence 224 677
Q ss_pred ccccccccCcccchhhhhhhhhhhhhhhhcccccCCCCCCccCCCeEEEeeeeeeeeEEEeeceeeccccccCCCCcccc
Q psy246 167 KDKQVYRNLSNVTAEGLNQVKLNFTWIADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECY 246 (615)
Q Consensus 167 lDKd~fRdLg~v~~~y~e~vk~hf~wva~~~~~v~~~~~~~~~~~~~l~~~~~~iPlE~v~R~~a~GS~~~r~~g~~~g~ 246 (615)
|| + +.+++|+|+||+|+|||||||||||+|||+|+||+|++||+
T Consensus 76 ----------------------H~---------i-----~~~~~r~~lvkk~~~iPlEvVvR~~atGS~~kry~gl~eg~ 119 (425)
T 2h31_A 76 ----------------------AF---------T-----RKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGY 119 (425)
T ss_dssp ----------------------SC---------C-----EECSSSEEEECCEEECSCEEEEESBCCHHHHHHSTTCCTTC
T ss_pred ----------------------eE---------e-----eccCCCeEEEEEccEeeEEEEEEeeeechhHHhccCCCCCC
Confidence 88 6 45689999999999999999999999999999999999999
Q ss_pred cCCCCceeeeecCCCCCCCCCCHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeeEeeecCCC
Q psy246 247 RFCPPCQETFFKDDANHDPQWSDEQILSANLD----NVARDEVQIMKRLSLVVFEILEKVWASLNCVLVDMKIEFGIDNE 322 (615)
Q Consensus 247 ~l~~Pi~e~~~K~d~~~D~~i~~~~~~~~~~~----~~~~~e~~~~~~~~~~v~~~l~~~~~~~g~~lvD~K~Efg~~~~ 322 (615)
+|++|++||+||+|++|||+||++|+.++|+. .++++|++.|+++|++||++++++|+++|++|||||||||+
T Consensus 120 ~l~~Pi~e~~~K~d~~hDp~Is~e~~~~~g~~~~~~~i~~ee~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~--- 196 (425)
T 2h31_A 120 KFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGV--- 196 (425)
T ss_dssp BCSSCCEEEESCCCSSCCCCBCHHHHHTTTCEETTEECCHHHHHHHHHHHHHHHHHHHHHHGGGSCEEEEEEECEEE---
T ss_pred cCCCCeeeeEeecccCCCCCCCHHHHHHcCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE---
Confidence 99999999999999999999999999998864 35999999999999999999999999999999999999994
Q ss_pred CCcccCCCCccchhhhhhccccchhhHHHHHHHHHHhhhhhhhhcceeeeeec-CCCCEEEEecccCCCcccccCCCccc
Q psy246 323 GKVSFFPQAPMKLYAIEVSDCSSMCYKLLEILEKVWASLNCVLVDMKIEFGID-NEGNILVSDVIDSDSWRLWPEGKKEL 401 (615)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvd~~~~~g~~-~~g~ivLaD~itpDs~Rlw~~~~~~~ 401 (615)
+ .+|+|+|+|||||||||||+.++++.
T Consensus 197 ----------------------------------------------------~~~~G~ivLaDeitPDs~R~W~~~~~~~ 224 (425)
T 2h31_A 197 ----------------------------------------------------DVTTKEIVLADVIDNDSWRLWPSGDRSQ 224 (425)
T ss_dssp ----------------------------------------------------ETTTCCEEECSCCCTTSEEEECCC----
T ss_pred ----------------------------------------------------ecCCCeEEEEEeeCCCccccccCCCCCC
Confidence 5 47999999999999999999998777
Q ss_pred ccccccccccccccccccchhhhhHHHHHHHhhccc-CCCCCeEEEEeCCCCCHHHHHHHHHHhhccCCCee-EEEeccc
Q psy246 402 MKDKQVYRNLSNVTAEGLNQVKLNFTWIADTLASVK-RPTDNLVVLALGSSSDLPFANKIDDANHDPQWSDE-QILSANL 479 (615)
Q Consensus 402 ~~DKq~~R~~~~~~~~~l~~VkenY~eVA~~L~~~k-~~~~~~V~Ii~gs~SD~~~~~~~~~~l~~~gi~~~-~V~saHR 479 (615)
++|||+||+|..+++.+|++|.++|+|+++++.... ++..++|+|+|||+||+|+|++|+.+|++||++|+ +|+||||
T Consensus 225 ~~DK~~~R~~~~~~~~~l~~v~~~Y~eVa~rL~i~~~~~~~~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR 304 (425)
T 2h31_A 225 QKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHK 304 (425)
T ss_dssp --------------CCSSSCCCCCHHHHHTTGGGGGSCSCCCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred cccHHHHHhccccchhhHHHHHHHHHHHHHHhhcccCccCCCeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeeeccC
Confidence 899999999999999999999999999999997753 33458999999999999999999999999999999 9999999
Q ss_pred CCcchHHHHHHHHhhHHHHHHHHhhhhcCCCCEEEEEecCCCCCchhhhcccCCCCeeccCCCCC--chhhhhhhhcCCC
Q psy246 480 DNVARDEVQIMKRLSLVVFEILVMKSWSSGKNVVFIAVAGKSNGLGPVISGNTCYPVINCPPLDS--TGRDVWSSLNLPA 557 (615)
Q Consensus 480 ~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~V~Ia~AG~~~~L~gvva~~t~~PVI~vP~~~~--g~~~l~S~lqmp~ 557 (615)
+|+++.+|+ ++++.+|++.||||+|||+|||||||||+|++||||||++.+ |+|+||||||||+
T Consensus 305 ---~p~~~~~~~-----------~~~~~~g~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~G~daLls~vqmp~ 370 (425)
T 2h31_A 305 ---GPDETLRIK-----------AEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPS 370 (425)
T ss_dssp ---CHHHHHHHH-----------HHHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECCCCCTTTHHHHGGGTSSCCS
T ss_pred ---CHHHHHHHH-----------HHHHHCCCCeEEEEEcCcccchHhHHhccCCCCEEEeeCccccccHHHHHHHhcCCC
Confidence 999999999 999999995599999999999999999999999999999765 9999999999999
Q ss_pred CceeeeecChhhHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q psy246 558 GIACSTVTAPSNAALAAAQILAQRDFFIWSKLRMYQTKLYIALNKEDKKSRQE 610 (615)
Q Consensus 558 Gv~v~tv~~~~nAa~~A~~Il~~~d~~l~~kl~~~~~~~~~~~~~~d~~l~~~ 610 (615)
|+||+||++|+|||++|+|||++.|+.||+||+.||.++++++.++|++|+..
T Consensus 371 g~pvatv~~~~nAa~~A~~Il~~~~~~l~~kl~~~~~~~~~~v~~~~~~l~~~ 423 (425)
T 2h31_A 371 GLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIREC 423 (425)
T ss_dssp SCCCEECCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEecCchHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999865
|
| >3kre_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.80A {Ehrlichia chaffeensis str} | Back alignment and structure |
|---|
| >2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* | Back alignment and structure |
|---|
| >3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} SCOP: d.143.1.0 | Back alignment and structure |
|---|
| >2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
| >2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 | Back alignment and structure |
|---|
| >3u55_A Phosphoribosylaminoimidazole-succinocarboxamide S; saicar synthetase-like fold, ligase, ATP-binding, NOVO purine biosynthesis; 1.90A {Pyrococcus horikoshii} PDB: 3u54_A | Back alignment and structure |
|---|
| >2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} SCOP: d.143.1.1 PDB: 1a48_A* 1obd_A* 2cnu_A* 2cnv_A* 1obg_A* | Back alignment and structure |
|---|
| >3r9r_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid; 1.85A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A* | Back alignment and structure |
|---|
| >3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0 | Back alignment and structure |
|---|
| >3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1 | Back alignment and structure |
|---|
| >1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1 | Back alignment and structure |
|---|
| >4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis} | Back alignment and structure |
|---|
| >1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A | Back alignment and structure |
|---|
| >3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* | Back alignment and structure |
|---|
| >3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A* | Back alignment and structure |
|---|
| >2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
| >3nua_A Phosphoribosylaminoimidazole-succinocarboxamide S; alpha-beta structure, csgid, ligase, center for structural G of infectious diseases; HET: ADP AMP CIT; 1.40A {Clostridium perfringens} SCOP: d.143.1.0 | Back alignment and structure |
|---|
| >3kre_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.80A {Ehrlichia chaffeensis str} | Back alignment and structure |
|---|
| >2z02_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; 2-layer sandwich, ligase, purine biosynthesis, structural genomics; HET: ATP CIT; 2.03A {Methanocaldococcus jannaschii} PDB: 2yzl_A* | Back alignment and structure |
|---|
| >2gqr_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; PURC, ADE2, ADE1, nucleotide complex, octahedral magnesium coordination; HET: ADP; 2.00A {Escherichia coli} PDB: 2gqs_A* | Back alignment and structure |
|---|
| >2ywv_A Phosphoribosylaminoimidazole succinocarboxamide S; ADP complex, structural genomics, NPPSFA; HET: ADP; 1.75A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
| >1kut_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; structural genomics, saicar synthetase, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: d.143.1.1 | Back alignment and structure |
|---|
| >3u55_A Phosphoribosylaminoimidazole-succinocarboxamide S; saicar synthetase-like fold, ligase, ATP-binding, NOVO purine biosynthesis; 1.90A {Pyrococcus horikoshii} PDB: 3u54_A | Back alignment and structure |
|---|
| >2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} SCOP: d.143.1.1 PDB: 1a48_A* 1obd_A* 2cnu_A* 2cnv_A* 1obg_A* | Back alignment and structure |
|---|
| >3r9r_A Phosphoribosylaminoimidazole-succinocarboxamide S; ssgcid; 1.85A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A* | Back alignment and structure |
|---|
| >1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* | Back alignment and structure |
|---|
| >3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae} | Back alignment and structure |
|---|
| >3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A* | Back alignment and structure |
|---|
| >3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A* | Back alignment and structure |
|---|
| >1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2 | Back alignment and structure |
|---|
| >1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2 | Back alignment and structure |
|---|
| >3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor} | Back alignment and structure |
|---|
| >1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A* | Back alignment and structure |
|---|
| >3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* | Back alignment and structure |
|---|
| >3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A* | Back alignment and structure |
|---|
| >1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2 | Back alignment and structure |
|---|
| >3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans} | Back alignment and structure |
|---|
| >3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
| >3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A | Back alignment and structure |
|---|
| >3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
| >3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* | Back alignment and structure |
|---|
| >1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1 | Back alignment and structure |
|---|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 615 | ||||
| d2cnqa1 | 304 | d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast | 4e-20 | |
| d2cnqa1 | 304 | d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast | 2e-08 | |
| d1o4va_ | 169 | c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoi | 2e-15 | |
| d1kuta_ | 224 | d.143.1.1 (A:) SAICAR synthase {Thermotoga maritim | 3e-14 | |
| d1kuta_ | 224 | d.143.1.1 (A:) SAICAR synthase {Thermotoga maritim | 2e-04 | |
| d1kuta_ | 224 | d.143.1.1 (A:) SAICAR synthase {Thermotoga maritim | 2e-04 | |
| d1u11a_ | 159 | c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoi | 2e-13 | |
| d1qcza_ | 163 | c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoi | 7e-13 | |
| d1xmpa_ | 155 | c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoi | 3e-12 |
| >d2cnqa1 d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: SAICAR synthase domain: SAICAR synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 89.4 bits (221), Expect = 4e-20
Identities = 47/287 (16%), Positives = 84/287 (29%), Gaps = 60/287 (20%)
Query: 74 ENVGDLLIEGKTKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFD 133
+ + L+ GK + I+ + D T++ + DRI+A D + + K + TK + F
Sbjct: 8 DGILPLVARGKVRDIY--EVDAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFK 65
Query: 134 ILNAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRNLSNVTAEGLNQVKLNFTWI 193
L+ + + + +
Sbjct: 66 FLSNDVRNHLVDIAPGKTIFDYLPAKLSEPKYKTQ------------------------- 100
Query: 194 ADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPPC- 252
+ L +IP+E + R TGS K + T + P
Sbjct: 101 --------------LEDRSLLVHKHKLIPLEVIVRGYITGSAWKEYVKTGTVHGLKQPQG 146
Query: 253 -------QETFFKDDANHDPQWSDEQILSANLDN-VARDEVQIMKRLSLVVFEILEKVWA 304
E F + DE I A V D + + L++ ++ +
Sbjct: 147 LKESQEFPEPIFTPSTKAEQGEHDENISPAQAAELVGEDLSRRVAELAVKLYSKCKDYAK 206
Query: 305 SLNCVLVDMKIEFGIDNEGKVSFFPQAPMKLYAIEV--SDCSSMCYK 349
++ D K EFGID + + EV D S
Sbjct: 207 EKGIIIADTKFEFGIDE--------KTNEIILVDEVLTPDSSRFWNG 245
|
| >d2cnqa1 d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 304 | Back information, alignment and structure |
|---|
| >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} Length = 169 | Back information, alignment and structure |
|---|
| >d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]} Length = 224 | Back information, alignment and structure |
|---|
| >d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]} Length = 224 | Back information, alignment and structure |
|---|
| >d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]} Length = 224 | Back information, alignment and structure |
|---|
| >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} Length = 159 | Back information, alignment and structure |
|---|
| >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} Length = 163 | Back information, alignment and structure |
|---|
| >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} Length = 155 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| d1kuta_ | 224 | SAICAR synthase {Thermotoga maritima [TaxId: 2336] | 100.0 | |
| d2cnqa1 | 304 | SAICAR synthase {Baker's yeast (Saccharomyces cere | 100.0 | |
| d1o4va_ | 169 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 100.0 | |
| d1qcza_ | 163 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 100.0 | |
| d1xmpa_ | 155 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 100.0 | |
| d1u11a_ | 159 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 100.0 | |
| d1kuta_ | 224 | SAICAR synthase {Thermotoga maritima [TaxId: 2336] | 99.72 | |
| d2cnqa1 | 304 | SAICAR synthase {Baker's yeast (Saccharomyces cere | 99.15 | |
| d1jq5a_ | 366 | Glycerol dehydrogenase {Bacillus stearothermophilu | 95.32 | |
| d1o2da_ | 359 | Alcohol dehydrogenase TM0920 {Thermotoga maritima | 94.75 | |
| d1vlja_ | 398 | NADH-dependent butanol dehydrogenase A (TM0820) {T | 92.68 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 90.36 | |
| d1oj7a_ | 390 | Hypothetical oxidoreductase yqhD {Escherichia coli | 86.61 | |
| d1kq3a_ | 364 | Glycerol dehydrogenase {Thermotoga maritima [TaxId | 84.23 | |
| d2dria_ | 271 | D-ribose-binding protein {Escherichia coli, strain | 84.03 | |
| d2nzug1 | 275 | Glucose-resistance amylase regulator CcpA, C-termi | 81.85 | |
| d1dbqa_ | 282 | Purine repressor (PurR), C-terminal domain {Escher | 81.62 |
| >d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: SAICAR synthase domain: SAICAR synthase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8e-57 Score=445.78 Aligned_cols=221 Identities=28% Similarity=0.463 Sum_probs=193.6
Q ss_pred cceeeeccCCCCeEEEEEccCccccCCcccccccchHHHhHHHHHHHHHHHhccccccceeccCcceeeeecCCCCCCCe
Q psy246 20 TKKIHLLKSDPNTVVVINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNASENVGDLLIEGKTKKIHLLKSDPNTVV 99 (615)
Q Consensus 20 aK~Vy~~~~dp~~vll~fKDdiTA~ng~kk~~i~GKG~lnn~iSs~iF~~L~~~evv~RniaaGs~kkry~lKdD~~~dp 99 (615)
||++|.+ ++.++++|||++|||||+++++|+|||+++|+||+++|++|++.
T Consensus 1 tki~~~~---~d~ll~~f~DriSAfD~~~~~~IpgKG~~l~~is~~~F~~L~~~-------------------------- 51 (224)
T d1kuta_ 1 TKIVKVT---GDYALLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEK-------------------------- 51 (224)
T ss_dssp CEEEEEE---TTEEEEEECCC-----------CCSHHHHHHHHHHHHHHHHHHT--------------------------
T ss_pred CeEEEeC---CCEEEEEEECCccccCcccCCCCCCccHHHHHHHHHHHHHhccC--------------------------
Confidence 6777766 46799999999999999999999999999999999999988853
Q ss_pred EEeccccccCCccCccchhhHHHHHHHHHHHHHHHHHhccccceeccCCCccccCCCCCCCCcccccccccccccCcccc
Q psy246 100 VINKDRITAGDGARAHDLKGKAEIATKTNTLVFDILNAAEMSMIKYSEENEYDKIPPGGSGLRKELMKDKQVYRNLSNVT 179 (615)
Q Consensus 100 li~~D~i~A~d~a~~~eI~~k~el~~kin~~lfe~le~~gi~LaDeIspDt~RlWd~~~~~i~T~~~lDKd~fRdLg~v~ 179 (615)
| |+|
T Consensus 52 ---------------------------------------g---------------------I~t---------------- 55 (224)
T d1kuta_ 52 ---------------------------------------G---------------------IKT---------------- 55 (224)
T ss_dssp ---------------------------------------T---------------------CCB----------------
T ss_pred ---------------------------------------C---------------------ccc----------------
Confidence 6 888
Q ss_pred hhhhhhhhhhhhhhhhcccccCCCCCCccCCCeEEEeeeeeeeeEEEeeceeeccccccCCCCcccccCCCCceeeeecC
Q psy246 180 AEGLNQVKLNFTWIADTLASVKRPTDNLVSPTVFLARNVTMIPIEWVTRRLATGSYLKRHPGTQECYRFCPPCQETFFKD 259 (615)
Q Consensus 180 ~~y~e~vk~hf~wva~~~~~v~~~~~~~~~~~~~l~~~~~~iPlE~v~R~~a~GS~~~r~~g~~~g~~l~~Pi~e~~~K~ 259 (615)
|| + +.++||+|+|++|+|||||||||||+|||+|+||+ ..+|.+|++|++|+++|+
T Consensus 56 ---------H~---------i-----~~~~~~~~~vkk~~~iPiE~VvR~y~~GS~~~~y~-~~~g~~~~~pl~e~~~k~ 111 (224)
T d1kuta_ 56 ---------HL---------V-----EYIPPRTLKVIPLKMFPLEVVVRLKKAGSFVRRYG-GAEGEDLPVPLVEFFIKD 111 (224)
T ss_dssp ---------SE---------E-----EEETTTEEEECCCEECSEEEEEEEECCHHHHHHHC-CCTTCEEEEEEEEEEECC
T ss_pred ---------cc---------c-----cccCcceeeehhcccCCeEEEEeeeEhHHhHhhcc-ccccccCCcccccchhcc
Confidence 99 6 56789999999999999999999999999999994 689999999999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeeEeeecCCCCCcccCCCCccchhhhh
Q psy246 260 DANHDPQWSDEQILSANLDNVARDEVQIMKRLSLVVFEILEKVWASLNCVLVDMKIEFGIDNEGKVSFFPQAPMKLYAIE 339 (615)
Q Consensus 260 d~~~D~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~~l~~~~~~~g~~lvD~K~Efg~~~~~~~~~~~~~~~~~~~~~ 339 (615)
++.|||+|+++++...| ++++++++.|+++|+++|++++++|+++|++|||+|+|||+
T Consensus 112 ~~~~D~~i~~~~~~~~~--~~~~~~~~~i~~~al~i~~~l~~~~~~~gliLvD~K~EFG~-------------------- 169 (224)
T d1kuta_ 112 DERHDPMVCVDHLEILG--IATKKQAEKMKEAAVKITLALKEFFERANFELWDIKYEFGL-------------------- 169 (224)
T ss_dssp GGGTCCBCCHHHHHHTT--SCCHHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECEEE--------------------
T ss_pred cccCcccccHHHHhHhh--cCCHHHHHHHHHHHHHHHHHHHHHHhhccceeeccceEEee--------------------
Confidence 99999999999999988 48999999999999999999999999999999999999994
Q ss_pred hccccchhhHHHHHHHHHHhhhhhhhhcceeeeeecCCCCEEEEecccCCCcccccCCCccccccccccccccccccccc
Q psy246 340 VSDCSSMCYKLLEILEKVWASLNCVLVDMKIEFGIDNEGNILVSDVIDSDSWRLWPEGKKELMKDKQVYRNLSNVTAEGL 419 (615)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~lvd~~~~~g~~~~g~ivLaD~itpDs~Rlw~~~~~~~~~DKq~~R~~~~~~~~~l 419 (615)
+.+|+|+|+|||||||||||+.+. ++|||+||+ +|
T Consensus 170 -----------------------------------~~~g~ivL~DEItpDs~R~w~~~~---~~DK~~~R~-------~l 204 (224)
T d1kuta_ 170 -----------------------------------DKDGNVVLGDEISPDTFRLRKKGE---IFDKDVYRR-------DL 204 (224)
T ss_dssp -----------------------------------CTTCCEEECSCCSTTTEEEEETTC---CCCHHHHHH-------GG
T ss_pred -----------------------------------cCCCcEEEEEccCCCccccCCCCC---ccCHHHHHh-------cc
Confidence 567999999999999999999775 589999997 58
Q ss_pred chhhhhHHHHHHHhhcc
Q psy246 420 NQVKLNFTWIADTLASV 436 (615)
Q Consensus 420 ~~VkenY~eVA~~L~~~ 436 (615)
+++.++|.|+++++..+
T Consensus 205 ~~~~~~Y~ev~~~~~~~ 221 (224)
T d1kuta_ 205 GDPLKKYREVLELCRSL 221 (224)
T ss_dssp GCTTHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHh
Confidence 89999999999998754
|
| >d2cnqa1 d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
| >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} | Back information, alignment and structure |
|---|
| >d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2cnqa1 d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
| >d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|