Psyllid ID: psy2561

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
ccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEEccEEEEEEcccccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHccc
ccccHHHHHHHHHHHHHccccccccccccccEEEEcccccccccccccccccccccccEEEccccccccccEEEEEEEEEEEEEccccccccccccccEEEEEEcccccccccHHHccHHHHHHHHccEEEEcc
MSQGHAIDAIARHNLwsvgldylhgtghgigsylnvhegpisvsylpkatdsgiladmfisdepgyyedgkfgiRIENIVQVipaetkysrknktfLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIpaetkysrknKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
*****AIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFIL**
MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
**QGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFILPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query134 2.2.26 [Sep-21-2011]
Q6P1B1623 Xaa-Pro aminopeptidase 1 yes N/A 0.888 0.191 0.583 1e-36
O54975623 Xaa-Pro aminopeptidase 1 yes N/A 0.888 0.191 0.575 4e-36
Q1JPJ2623 Xaa-Pro aminopeptidase 1 yes N/A 0.888 0.191 0.566 2e-35
Q9NQW7623 Xaa-Pro aminopeptidase 1 yes N/A 0.888 0.191 0.566 2e-35
Q54G06627 Xaa-Pro aminopeptidase 1 yes N/A 0.895 0.191 0.532 2e-32
B6QG01657 Probable Xaa-Pro aminopep N/A N/A 0.895 0.182 0.516 1e-31
B8M9W2657 Probable Xaa-Pro aminopep N/A N/A 0.932 0.190 0.496 2e-31
B6HQC9613 Probable Xaa-Pro aminopep yes N/A 0.925 0.202 0.508 7e-31
E9CTR7611 Probable Xaa-Pro aminopep N/A N/A 0.880 0.193 0.516 8e-31
E3S7K9656 Probable Xaa-Pro aminopep N/A N/A 0.880 0.179 0.516 8e-31
>sp|Q6P1B1|XPP1_MOUSE Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep1 PE=2 SV=1 Back     alignment and function desciption
 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 90/120 (75%), Gaps = 1/120 (0%)

Query: 2   SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61
           ++GH +D+ AR  LW  GLDYLHGTGHG+GS+LNVHEGP  +SY    +D  + A M ++
Sbjct: 463 TKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISY-KTFSDEPLEAGMIVT 521

Query: 62  DEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADE 121
           DEPGYYEDG FGIRIEN+V V+PA+TKY+  N+  LTF+ +TLVPIQT ++  N LT  E
Sbjct: 522 DEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKE 581
Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|O54975|XPP1_RAT Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus GN=Xpnpep1 PE=1 SV=1 Back     alignment and function description
>sp|Q1JPJ2|XPP1_BOVIN Xaa-Pro aminopeptidase 1 OS=Bos taurus GN=XPNPEP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9NQW7|XPP1_HUMAN Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP1 PE=1 SV=3 Back     alignment and function description
>sp|Q54G06|XPP1_DICDI Xaa-Pro aminopeptidase 1 OS=Dictyostelium discoideum GN=xpnpep1 PE=3 SV=1 Back     alignment and function description
>sp|B6QG01|AMPP1_PENMQ Probable Xaa-Pro aminopeptidase P OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=ampp PE=3 SV=1 Back     alignment and function description
>sp|B8M9W2|AMPP1_TALSN Probable Xaa-Pro aminopeptidase P OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=ampp PE=3 SV=1 Back     alignment and function description
>sp|B6HQC9|AMPP1_PENCW Probable Xaa-Pro aminopeptidase P OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=ampp PE=3 SV=1 Back     alignment and function description
>sp|E9CTR7|AMPP1_COCPS Probable Xaa-Pro aminopeptidase P OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=AMPP PE=3 SV=1 Back     alignment and function description
>sp|E3S7K9|AMPP1_PYRTT Probable Xaa-Pro aminopeptidase P OS=Pyrenophora teres f. teres (strain 0-1) GN=ampp PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
156541578 617 PREDICTED: xaa-Pro aminopeptidase 1-like 0.917 0.199 0.626 2e-40
350415182 623 PREDICTED: xaa-Pro aminopeptidase 1-like 0.917 0.197 0.634 3e-40
340725571 623 PREDICTED: xaa-Pro aminopeptidase 1-like 0.917 0.197 0.634 3e-40
332024420 634 Xaa-Pro aminopeptidase 1 [Acromyrmex ech 0.902 0.190 0.619 3e-40
307179789 622 Xaa-Pro aminopeptidase 1 [Camponotus flo 0.902 0.194 0.628 4e-40
66525391 623 PREDICTED: xaa-Pro aminopeptidase 1-like 0.917 0.197 0.626 1e-39
307205150 623 Xaa-Pro aminopeptidase 1 [Harpegnathos s 0.902 0.194 0.619 1e-39
383858475 623 PREDICTED: xaa-Pro aminopeptidase 1-like 0.910 0.195 0.614 1e-38
391333547 693 PREDICTED: xaa-Pro aminopeptidase 1-like 0.910 0.176 0.590 9e-38
260826682 620 hypothetical protein BRAFLDRAFT_125093 [ 0.925 0.2 0.588 2e-37
>gi|156541578|ref|XP_001599945.1| PREDICTED: xaa-Pro aminopeptidase 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/123 (62%), Positives = 98/123 (79%)

Query: 3   QGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISD 62
           +G+ +DA AR NLW VGLDYLHGTGHG+GSYLNVHE P  +S+ P   D G+ + MF+S+
Sbjct: 459 KGNYLDAFARKNLWDVGLDYLHGTGHGVGSYLNVHEYPAMISWRPYPDDPGLQSGMFLSN 518

Query: 63  EPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEV 122
           EPGYYED KFGIR+ENI  V+ AETKY+R N+ +LTF+T+TLVPIQT+LL  +MLT +E+
Sbjct: 519 EPGYYEDEKFGIRLENIEMVVKAETKYTRLNREYLTFETVTLVPIQTTLLNISMLTEEEI 578

Query: 123 SRI 125
             I
Sbjct: 579 QYI 581

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350415182|ref|XP_003490556.1| PREDICTED: xaa-Pro aminopeptidase 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340725571|ref|XP_003401142.1| PREDICTED: xaa-Pro aminopeptidase 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|332024420|gb|EGI64618.1| Xaa-Pro aminopeptidase 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307179789|gb|EFN67979.1| Xaa-Pro aminopeptidase 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|66525391|ref|XP_394094.2| PREDICTED: xaa-Pro aminopeptidase 1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|307205150|gb|EFN83593.1| Xaa-Pro aminopeptidase 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383858475|ref|XP_003704727.1| PREDICTED: xaa-Pro aminopeptidase 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|391333547|ref|XP_003741174.1| PREDICTED: xaa-Pro aminopeptidase 1-like [Metaseiulus occidentalis] Back     alignment and taxonomy information
>gi|260826682|ref|XP_002608294.1| hypothetical protein BRAFLDRAFT_125093 [Branchiostoma floridae] gi|229293645|gb|EEN64304.1| hypothetical protein BRAFLDRAFT_125093 [Branchiostoma floridae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
UNIPROTKB|F1P0A1627 XPNPEP1 "Uncharacterized prote 0.888 0.189 0.616 2.2e-36
MGI|MGI:2180003623 Xpnpep1 "X-prolyl aminopeptida 0.888 0.191 0.583 9.9e-35
RGD|621274623 Xpnpep1 "X-prolyl aminopeptida 0.888 0.191 0.575 3.6e-34
UNIPROTKB|O54975623 Xpnpep1 "Xaa-Pro aminopeptidas 0.888 0.191 0.575 3.6e-34
UNIPROTKB|Q5T6H7552 XPNPEP1 "Xaa-Pro aminopeptidas 0.888 0.215 0.566 4e-34
ZFIN|ZDB-GENE-040426-999620 xpnpep1 "X-prolyl aminopeptida 0.888 0.191 0.566 9.7e-34
UNIPROTKB|Q1JPJ2623 XPNPEP1 "Xaa-Pro aminopeptidas 0.888 0.191 0.566 9.9e-34
UNIPROTKB|F1PQF1623 XPNPEP1 "Uncharacterized prote 0.888 0.191 0.566 9.9e-34
UNIPROTKB|Q9NQW7623 XPNPEP1 "Xaa-Pro aminopeptidas 0.888 0.191 0.566 9.9e-34
UNIPROTKB|G8JLB2642 XPNPEP1 "Xaa-Pro aminopeptidas 0.888 0.185 0.566 1.2e-33
UNIPROTKB|F1P0A1 XPNPEP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 396 (144.5 bits), Expect = 2.2e-36, P = 2.2e-36
 Identities = 74/120 (61%), Positives = 92/120 (76%)

Query:     2 SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61
             ++GH +D+ AR  LW  GLDYLHGTGHG+GS+LNVHEGP  +SY   A D  + A M +S
Sbjct:   467 TKGHLLDSFARSALWDCGLDYLHGTGHGVGSFLNVHEGPCGISYKTFA-DEPLEAGMIVS 525

Query:    62 DEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADE 121
             DEPGYYEDG FGIRIEN+V VIPAETKY+ KN+  LTF+ +TLVPIQT ++  ++LT  E
Sbjct:   526 DEPGYYEDGSFGIRIENVVLVIPAETKYNFKNRGSLTFEPLTLVPIQTKMIDVSLLTQKE 585
GO:0005737 "cytoplasm" evidence=IEA
GO:0010815 "bradykinin catabolic process" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA
GO:0042803 "protein homodimerization activity" evidence=IEA
GO:0070006 "metalloaminopeptidase activity" evidence=IEA
MGI|MGI:2180003 Xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621274 Xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O54975 Xpnpep1 "Xaa-Pro aminopeptidase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5T6H7 XPNPEP1 "Xaa-Pro aminopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-999 xpnpep1 "X-prolyl aminopeptidase (aminopeptidase P) 1, soluble" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q1JPJ2 XPNPEP1 "Xaa-Pro aminopeptidase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PQF1 XPNPEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NQW7 XPNPEP1 "Xaa-Pro aminopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G8JLB2 XPNPEP1 "Xaa-Pro aminopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O54975XPP1_RAT3, ., 4, ., 1, 1, ., 90.5750.88800.1910yesN/A
Q1JPJ2XPP1_BOVIN3, ., 4, ., 1, 1, ., 90.56660.88800.1910yesN/A
Q6P1B1XPP1_MOUSE3, ., 4, ., 1, 1, ., 90.58330.88800.1910yesN/A
B6HQC9AMPP1_PENCW3, ., 4, ., 1, 1, ., 90.50800.92530.2022yesN/A
Q9NQW7XPP1_HUMAN3, ., 4, ., 1, 1, ., 90.56660.88800.1910yesN/A
Q54G06XPP1_DICDI3, ., 4, ., 1, 1, ., 90.53270.89550.1913yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
cd01085224 cd01085, APP, X-Prolyl Aminopeptidase 2 4e-44
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 3e-20
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 5e-15
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 3e-14
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 4e-10
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 1e-07
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 8e-04
>gnl|CDD|238518 cd01085, APP, X-Prolyl Aminopeptidase 2 Back     alignment and domain information 
 Score =  143 bits (363), Expect = 4e-44
 Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 2/88 (2%)

Query: 2   SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61
           + G  +DA+AR  LW  GLDY HGTGHG+GS+LNVHEGP S+S  P   +  + A M +S
Sbjct: 136 TTGSQLDALARQPLWKAGLDYGHGTGHGVGSFLNVHEGPQSIS--PAPNNVPLKAGMILS 193

Query: 62  DEPGYYEDGKFGIRIENIVQVIPAETKY 89
           +EPGYY++GK+GIRIEN+V V+ AET  
Sbjct: 194 NEPGYYKEGKYGIRIENLVLVVEAETTE 221

E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide. Length = 224
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 134
KOG2413|consensus606 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 99.93
PRK09795361 aminopeptidase; Provisional 99.92
PRK15173323 peptidase; Provisional 99.9
PRK12897248 methionine aminopeptidase; Reviewed 99.89
PRK05716252 methionine aminopeptidase; Validated 99.89
PRK07281286 methionine aminopeptidase; Reviewed 99.89
PRK14575406 putative peptidase; Provisional 99.89
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.88
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 99.87
PRK14576405 putative endopeptidase; Provisional 99.87
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 99.86
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 99.86
PRK12318291 methionine aminopeptidase; Provisional 99.86
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 99.85
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 99.85
PLN03158396 methionine aminopeptidase; Provisional 99.85
PRK10879438 proline aminopeptidase P II; Provisional 99.84
PRK12896255 methionine aminopeptidase; Reviewed 99.84
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.83
PRK13607443 proline dipeptidase; Provisional 99.8
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 99.79
COG0024255 Map Methionine aminopeptidase [Translation, riboso 99.74
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.7
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.7
KOG2414|consensus488 99.68
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 99.65
KOG2737|consensus492 99.59
KOG2738|consensus369 99.57
PRK08671291 methionine aminopeptidase; Provisional 99.42
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 99.34
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.33
PTZ00053470 methionine aminopeptidase 2; Provisional 99.27
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 99.25
KOG1189|consensus 960 97.97
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 94.23
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 90.16
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 88.22
PLN03158396 methionine aminopeptidase; Provisional 87.81
PRK05716252 methionine aminopeptidase; Validated 84.99
KOG2775|consensus397 81.46
>KOG2413|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.4e-36  Score=256.99  Aligned_cols=128  Identities=50%  Similarity=0.876  Sum_probs=121.1

Q ss_pred             CchHHHHHHHHHHHHHcCCCCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeEE
Q psy2561           2 SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQ   81 (134)
Q Consensus         2 ~~~~~id~~~r~~l~~~G~~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v~   81 (134)
                      |.|+.+|.+||..+|+.|++|.|+||||||||++|||+|..++.++-.+..+|++|||+++|||+|.+|.+|+|+||.++
T Consensus       451 t~g~~lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~  530 (606)
T KOG2413|consen  451 TKGSVLDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVE  530 (606)
T ss_pred             CCcchhHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEE
Confidence            57899999999999999999999999999999999999988877654677889999999999999999999999999999


Q ss_pred             EecCCccccCCCceeeeeeeccCCCccchhhhhccCCHHHHHHHHhhhhh
Q psy2561          82 VIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFI  131 (134)
Q Consensus        82 Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~~ll~~~e~~wln~y~~~  131 (134)
                      |.+.+++++|  +.||+||.||.+|+|.++||++||+++|+.|||.||+.
T Consensus       531 vvd~~~~~~~--~~~L~fe~lT~vP~q~klid~~LLs~eE~~~LN~Yh~~  578 (606)
T KOG2413|consen  531 VVDAGTKHNF--RGFLTFEPLTLVPYQTKLIDKSLLSEEEINWLNEYHAK  578 (606)
T ss_pred             EEeccccccc--cceeeeccceecceecccCChhhCCHHHHHHHHHHHHH
Confidence            9999888888  89999999999999999999999999999999999985

>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG2414|consensus Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>KOG2737|consensus Back     alignment and domain information
>KOG2738|consensus Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>KOG1189|consensus Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>KOG2775|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
3ctz_A623 Structure Of Human Cytosolic X-Prolyl Aminopeptidas 9e-36
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 6e-08
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 8e-08
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 3e-06
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 6e-04
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 8e-04
>pdb|3CTZ|A Chain A, Structure Of Human Cytosolic X-Prolyl Aminopeptidase Length = 623 Back     alignment and structure 
Iteration: 1

 Score =  145 bits (365), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Query: 2   SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61
           ++GH +D+ AR  LW  GLDYLHGTGHG+GS+LNVHEGP  +SY    +D  + A M ++
Sbjct: 463 TKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISY-KTFSDEPLEAGMIVT 521
Query: 62  DEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADE 121
           DEPGYYEDG FGIRIEN+V V+P +TKY+  N+  LT + +TLVPIQT ++  + LT  E
Sbjct: 522 DEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKE 581
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 1e-60
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 2e-17
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 3e-16
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 1e-15
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 1e-15
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 1e-15
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 3e-13
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 5e-12
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 1e-11
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 5e-11
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 9e-10
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 2e-05
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 7e-04
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Length = 623 Back     alignment and structure
 Score =  195 bits (497), Expect = 1e-60
 Identities = 67/119 (56%), Positives = 86/119 (72%), Gaps = 1/119 (0%)

Query: 4   GHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDE 63
           GH +D+ AR  LW  GLDYLHGTGHG+GS+LNVHEGP  +SY   + D  + A M ++DE
Sbjct: 465 GHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFS-DEPLEAGMIVTDE 523

Query: 64  PGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEV 122
           PGYYEDG FGIRIEN+V V+P +TKY+  N+  LT + +TLVPIQT ++  + LT  E 
Sbjct: 524 PGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKEC 582
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 99.93
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 99.93
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 99.93
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 99.93
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 99.93
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 99.93
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 99.92
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 99.92
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 99.92
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 99.92
3mx6_A262 Methionine aminopeptidase; seattle structural geno 99.91
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 99.9
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 99.9
4fuk_A337 Methionine aminopeptidase; structural genomics con 99.9
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 99.89
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 99.89
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 99.89
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 99.89
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 99.88
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 99.88
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 99.88
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 99.88
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 99.87
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 99.87
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 99.87
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 99.85
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 99.77
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 99.75
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 99.63
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 99.51
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 99.45
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 87.35
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.5e-38  Score=276.14  Aligned_cols=129  Identities=52%  Similarity=0.929  Sum_probs=119.0

Q ss_pred             CchHHHHHHHHHHHHHcCCCCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeEE
Q psy2561           2 SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQ   81 (134)
Q Consensus         2 ~~~~~id~~~r~~l~~~G~~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v~   81 (134)
                      +++.+||+++|+++++.|++|.|++|||||+|+++||+|..++.. .+++.+|+||||||+|||+|.+|.+|+|+||+|+
T Consensus       463 ~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~-~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd~vl  541 (623)
T 3ctz_A          463 TKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYK-TFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVL  541 (623)
T ss_dssp             CBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTT-CSCSCBCCTTCEEEECCEEEETTTEEEECBEEEE
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCC-CCCCCccCCCeEEEEeCcEEECCceEEEEeeEEE
Confidence            468899999999999999999999999999999999999855542 1357789999999999999999999999999999


Q ss_pred             EecCCccccCCCceeeeeeeccCCCccchhhhhccCCHHHHHHHHhhhhh
Q psy2561          82 VIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFI  131 (134)
Q Consensus        82 Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~~ll~~~e~~wln~y~~~  131 (134)
                      ||++++..+|++.+|||||+||.+|+++++|+.+|||++|++|||+||+.
T Consensus       542 Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~  591 (623)
T 3ctz_A          542 VVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLT  591 (623)
T ss_dssp             EEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHH
T ss_pred             EecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99987667788899999999999999999999999999999999999985
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 134
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 1e-08
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 3e-05
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 6e-05
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 5e-04
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 0.003
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 49.2 bits (116), Expect = 1e-08
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 3   QGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISD 62
               +D+IAR  +   G         G G  L +HE P    Y       G    M I+ 
Sbjct: 133 TAKELDSIAREIIKEYGYGDYFIHSLGHGVGLEIHEWPRISQYDETVLKEG----MVITI 188

Query: 63  EPGYYEDGKFGIRIENIVQV 82
           EPG Y     G+RIE+ V +
Sbjct: 189 EPGIYIPKLGGVRIEDTVLI 208
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 99.9
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 99.87
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 99.86
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 99.86
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 99.81
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 99.8
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 99.8
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 99.68
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.90  E-value=2e-24  Score=161.83  Aligned_cols=88  Identities=31%  Similarity=0.471  Sum_probs=81.1

Q ss_pred             CchHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561           2 SQGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI   79 (134)
Q Consensus         2 ~~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~   79 (134)
                      .++++|++++++.+++.|+.  +.|++|||+|  +++||.|.+. .   .++.+|++||||+|||++|.++.+|+|+||+
T Consensus       132 ~~~~~v~~~~~~~~~~~g~~~~~~~~~Ghg~g--~~~~e~~~~~-~---~~~~~L~~gMv~~iep~~~~~~~~g~r~Ed~  205 (221)
T d1pv9a2         132 MTAKELDSIAREIIKEYGYGDYFIHSLGHGVG--LEIHEWPRIS-Q---YDETVLKEGMVITIEPGIYIPKLGGVRIEDT  205 (221)
T ss_dssp             CBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEES-T---TCCCBCCTTCEEEECCEEEETTTEEEECBEE
T ss_pred             CcHHHHHHHHHhhhhhcccCCceeccccCCCC--cccchhcccc-c---CCCceeCCCcEEEECCEEEECCCCEEEEeEE
Confidence            46889999999999999994  7999999999  9999999743 3   4678999999999999999999999999999


Q ss_pred             EEEecCCccccCCCceeeeeeeccCCCc
Q psy2561          80 VQVIPAETKYSRKNKTFLTFKTITLVPI  107 (134)
Q Consensus        80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~  107 (134)
                      |+||++            |+|+||..|+
T Consensus       206 v~Vte~------------G~e~Lt~~pr  221 (221)
T d1pv9a2         206 VLITEN------------GAKRLTKTER  221 (221)
T ss_dssp             EEECSS------------SEEESCCSCC
T ss_pred             EEECCC------------cceECCCCCC
Confidence            999999            9999999996
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure