Psyllid ID: psy2630

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470--
Protein Sequence
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQSIHL
Secondary Structure (PSIPRED)
ccccccHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccEEEEEEcccccEEEEEEEEEEEcccEEEEEccccccccccEEEEEEccccEEEEEEEccccHHHHHHHHHcccEEEEEEcccccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHcccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEEEEEEEccccEEEEEcccccccHHHcEEEEEccccccEEEEEccccHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHccccccHHHHHcHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mnapntqylldfvcPDFLMLRMIARGLIlwddvmptvewveshipstiipyclrkpransvedeavdFETMNQAYCNIVAGACMAMGLrfagsankHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTrvesrpplssvisYGSYVAVHMALGLLFLgggmytlstsppAIAALVTAffpkfpthsldnRFHLQALRHLYVLaveprlliprdidcgnlcYAHITVVYLnkeqftakapcllpelhLLEEvrindkrywpitfqknrNWKQLQYLLLGQkcidikqrtgclsyledphgYKTMLAHTLTINKTIAWSVLEESifsfssdpaiIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALsrlpsplssYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQSIHL
Flexible Loop (DISEMBL)
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIpstiipyclrkprANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRtrvesrpplssVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQSIHL
Low Complexity Region (SEG)
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMAlgllflgggMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCllpelhlleeVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQSIHL
Disordered region (IsUnstruct)
******QYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNG*****
Disordered Region (DISOPRED)
*NAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYC***************FETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTI***************FSSDPAIIKFTESFFNVI******EYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQ****
Disordered Region (DISEMBL)
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQA*********SSELVAADMALSITHKVIVIYVVLNGQSIHL
Disordered Region (DISPRO)
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQS***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVIYVVLNGQSIHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	472	2.2.26 [Sep-21-2011]
Q9H1A4	1944	Anaphase-promoting comple	yes	N/A	0.879	0.213	0.428	7e-93
P53995	1944	Anaphase-promoting comple	yes	N/A	0.879	0.213	0.421	3e-91
Q54NC6	2269	Anaphase-promoting comple	yes	N/A	0.817	0.170	0.307	1e-62
Q9FFF9	1678	Anaphase-promoting comple	yes	N/A	0.705	0.198	0.352	6e-60
P24686	2067	Negative regulator of mit	yes	N/A	0.641	0.146	0.375	6e-57
Q9URV2	1458	Anaphase-promoting comple	yes	N/A	0.809	0.262	0.338	9e-54
P53886	1748	Anaphase-promoting comple	yes	N/A	0.322	0.086	0.270	2e-11

>sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1

 Score =  341 bits (875), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 191/446 (42%), Positives = 283/446 (63%), Gaps = 31/446 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I        R NS
Sbjct: 1387 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQII--------RENS 1438

Query: 61   VE--------DEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSL 112
            +          E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F + 
Sbjct: 1439 ISLSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTY 1498

Query: 113  SAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISY 172
             +   A + G   +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++Y
Sbjct: 1499 LSAPNASVTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNY 1552

Query: 173  GSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVL 232
            G ++A HMALGLLFLGGG Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVL
Sbjct: 1553 GFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVL 1612

Query: 233  AVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAK-----APCLLPELHLLEEVRINDKR 287
            A EPRLL+P D+D    CYA + V Y   + +        AP LLPELHLL+++++   R
Sbjct: 1613 AAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPR 1672

Query: 288  YWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWS 347
            YW +    ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +
Sbjct: 1673 YWELLIDLSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARA 1732

Query: 348  VLEESIFSFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWL 406
               E+I +F+SDPA++ F E F    +N+G K E    L   V+YE + ++   ++P ++
Sbjct: 1733 FKPETISAFTSDPALLSFAEYFCKPTVNMGQKQEI-LDLFSSVLYECVTQETPEMLPAYI 1791

Query: 407  SIIEALSRLPSPLSS--YEIWQIKLL 430
            ++ +A+ RL     S   E+WQIKL+
Sbjct: 1792 AMDQAIRRLGRREMSETSELWQIKLV 1817

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.
Homo sapiens (taxid: 9606)

>sp|P53995|APC1_MOUSE Anaphase-promoting complex subunit 1 OS=Mus musculus GN=Anapc1 PE=1 SV=2

 Score =  336 bits (861), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 188/446 (42%), Positives = 283/446 (63%), Gaps = 31/446 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I        R NS
Sbjct: 1387 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQII--------RENS 1438

Query: 61   VE--------DEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSL 112
            +          E ++ ET++QA+  I+AGAC+++G RFAGS N  A++ L  +   F + 
Sbjct: 1439 ISLSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFSCLHKFAKDFMNY 1498

Query: 113  SAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISY 172
             +   A + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++Y
Sbjct: 1499 LSAPNASVTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNY 1552

Query: 173  GSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVL 232
            G ++A HMALGLLFLGGG Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVL
Sbjct: 1553 GFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVL 1612

Query: 233  AVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAK-----APCLLPELHLLEEVRINDKR 287
            A EPRLL+P D+D    CYA I V Y   + +        AP LLPELHLL+++++   R
Sbjct: 1613 AAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLKQMKVKGPR 1672

Query: 288  YWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWS 347
            YW +    ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +
Sbjct: 1673 YWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARA 1732

Query: 348  VLEESIFSFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWL 406
               E+I SF+SDPA++ F E F    +++G K E    L   ++YE + ++   ++P ++
Sbjct: 1733 FKPETISSFTSDPALLSFAEYFCKPTVSMGPKQEI-LDLFSSILYECVAQETPEMLPAYI 1791

Query: 407  SIIEALSRLPSP--LSSYEIWQIKLL 430
            ++ +AL  L       + ++WQIKL+
Sbjct: 1792 AMDQALRSLKKRDMSDTSDLWQIKLI 1817

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Mus musculus (taxid: 10090)

>sp|Q54NC6|APC1_DICDI Anaphase-promoting complex subunit 1 OS=Dictyostelium discoideum GN=anapc1 PE=3 SV=1

 Score =  241 bits (614), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 241/494 (48%), Gaps = 108/494 (21%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            ++ P+T + L+++ PD ++LR++ R LILWD + P  +W+   +P  +         +  
Sbjct: 1626 LSIPDTTFGLNYIRPDLVLLRILGRNLILWDSIKPQFQWIIDSVPLVVRKNVTIDRNSEK 1685

Query: 61   VEDE----------------AVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLIN 104
            V  E                  DFE+    +CN++AGA  ++GL++AGS N++A+++L++
Sbjct: 1686 VFQEHSNNNNNNNKSRSSSSLNDFESFILIFCNVIAGAAFSIGLKYAGSLNENAFSLLMD 1745

Query: 105  YCNLFTSLSA------------KSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRI 152
               LF                 +   +   + T ETCLNV+ LSL++VM+G+G+LE L+I
Sbjct: 1746 LIQLFRKRQVYLNKCLLKKKKIEPTFDKVMRVTTETCLNVVALSLSLVMAGSGNLETLKI 1805

Query: 153  CRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKF 212
             R LR+R+ +       I+YG+++A++MA+G LFLGGG YTLSTS  AIA+LV + +P+F
Sbjct: 1806 LRMLRSRIGNE------ITYGNHMAINMAIGFLFLGGGQYTLSTSNIAIASLVCSLYPRF 1859

Query: 213  PTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVYLNKEQFTAK----- 267
            P  S DN +HLQA RHLY LA++PR LI RD+D    C+  I +  LN +    +     
Sbjct: 1860 PCSSTDNDYHLQAFRHLYFLAIDPRCLITRDVDTLAPCHVPIELTILNNDTMKLETKQLV 1919

Query: 268  APCLLPELHLLEEVRINDKRYWPITFQKNRNW---------------------------- 299
             PCL+PEL  +  + I   RYW I    NR +                            
Sbjct: 1920 TPCLIPELSSIRSISIKSPRYWNIFI--NRGFVDGGVDININNNNNNNNNNNNNNNNNNN 1977

Query: 300  -------------KQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTM------------- 333
                            + +L     I +K++ G L Y EDP G++++             
Sbjct: 1978 NNNNNNNNNNNNNNNNKNILKNHPTIFLKRKIGHLPYTEDPEGFRSLSKSFPKSESISLY 2037

Query: 334  -LAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYE 392
              +     NK       EE + SF SDP ++ F + F         NE+E      ++YE
Sbjct: 2038 SSSKGFQKNK-------EEFLKSFISDPNLLAFAKHFC----TNQSNEFE-HFNTTILYE 2085

Query: 393  SLIRDKLTIVPIWL 406
             L +D   ++P+ L
Sbjct: 2086 CLTQDTPEVIPLLL 2099

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9FFF9|APC1_ARATH Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana GN=APC1 PE=2 SV=1

 Score =  232 bits (591), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 219/383 (57%), Gaps = 50/383 (13%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            ++ P T Y L+ V PDF+MLR+IAR LI+W  + PT +W++S +P  ++   + + R + 
Sbjct: 1177 LSIPQTHYDLECVRPDFIMLRVIARNLIMWSRICPTCDWIQSQVPE-VVKNGISQLRDDM 1235

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYC----NLFTSLSA-- 114
                 VD E + QAY NIVAGAC+++GLRFAG+ + +A ++L +Y     N    LSA  
Sbjct: 1236 DNMYEVDVEALVQAYVNIVAGACISLGLRFAGTRDGNARDLLNSYALYLLNEIKPLSATP 1295

Query: 115  -----KSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSV 169
                 + I++   + T+E CL +I++SL++VM+G+GDL+V R+ R+LR+R  +       
Sbjct: 1296 GNAFPRGISKFVDRGTLEMCLYLIIISLSVVMAGSGDLQVFRLLRFLRSRNSA----DGH 1351

Query: 170  ISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHL 229
             +YG+ +AV +A G LFLGGGM T ST+  ++A L+   +P+ P+   DNR HLQA RHL
Sbjct: 1352 ANYGTQMAVSLATGFLFLGGGMRTFSTNNGSLAMLLITLYPRLPSGPNDNRCHLQAFRHL 1411

Query: 230  YVLAVEPRLLIPRDIDCGNLCYAHITVVY-----LNKEQFTAKAPCLLPELHLLEEVRIN 284
            YVLA E R L   D+D G   YA + V        ++ +F    PC+LPE  +L+ + + 
Sbjct: 1412 YVLATEARWLQTIDVDSGLPVYAPLEVTVKETKLYSETKFCEITPCILPERAILKRICVC 1471

Query: 285  DKRYWPITFQKNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTI 344
              RYWP         +Q++ L+ G + +                G   ++A++   ++ +
Sbjct: 1472 GPRYWP---------QQIE-LVFGLRTL----------------GESNLIANS---HREL 1502

Query: 345  AWSVLEESIFSFSSDPAIIKFTE 367
                ++  + +FSSDP++I F +
Sbjct: 1503 DSDSVDHLVSTFSSDPSLIAFAQ 1525

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication.

Arabidopsis thaliana (taxid: 3702)

>sp|P24686|BIME_EMENI Negative regulator of mitosis OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimE PE=2 SV=2

 Score =  222 bits (565), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 180/320 (56%), Gaps = 17/320 (5%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            ++ P+T    D+V PD  +LR +AR +I+WD +    EW    +P        R+ R   
Sbjct: 1553 VDIPDTTVRFDYVRPDLFLLRTLARHIIMWDRIQACDEWFIGSLPEVY----RRRYRLTG 1608

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF---TSLSAKSI 117
            V       ++ +  + NI+AG C A+GLRFAGS +    ++L++Y + F   + L A + 
Sbjct: 1609 VRR----LKSNDMPFFNIIAGLCFALGLRFAGSPDPTVRDILLSYLDQFIRISRLPAPNY 1664

Query: 118  AELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVA 177
                 + ++  C +V+ LSLA VM+GTGDL + R  R L  RV+   P      YGS++A
Sbjct: 1665 DARLARNSVRHCQDVVALSLAAVMAGTGDLALFRRLRSLHGRVDPDTP------YGSHMA 1718

Query: 178  VHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPR 237
             HMA+G+LFLGGG YTL TS  A+A+L+ + +P FPT  LDN  HLQA RHL+VLA EPR
Sbjct: 1719 AHMAIGMLFLGGGSYTLGTSNLAVASLICSLYPIFPTTVLDNECHLQAFRHLWVLAAEPR 1778

Query: 238  LLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKNR 297
             ++PRD+D        ITV   +    T  APCLLP+L+ + +V +    YWP+    + 
Sbjct: 1779 CIVPRDLDSRRPISMPITVTDSDGVSGTLTAPCLLPDLNRIAKVEVLSPDYWPLVLDFDS 1838

Query: 298  NWKQLQYLLLGQKCIDIKQR 317
            N    +    G + I ++++
Sbjct: 1839 NPGVREKFQQGDQSIYLRRK 1858

Negative regulator of mitosis in E.nidulans. This protein is part of a regulatory pathway that includes the nimA protein kinase. It is required to prevent premature entry into mitosis. Mutations to this protein both cause cells to enter mitosis and prevent them from leaving mitosis.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|Q9URV2|APC1_SCHPO Anaphase-promoting complex subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut4 PE=1 SV=1

 Score =  211 bits (537), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 220/417 (52%), Gaps = 35/417 (8%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIP-YCLRKPRAN 59
            ++ P ++YLLDF  PD ++LR+  + LI+WD+V    EWV+  IP  ++  + L++ +  
Sbjct: 1027 IDIPKSRYLLDFYRPDLILLRVAGKNLIMWDEVKADYEWVKYQIPDIMLSQFDLQEKKVL 1086

Query: 60   SVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSL---SAKS 116
            S +D  +          N++AG C ++GLRFAG+ N  A  +LIN+ + F  L    AK+
Sbjct: 1087 SSDDLLL---------YNVLAGICFSLGLRFAGTGNPKAKEILINFLDSFIRLCHLPAKT 1137

Query: 117  IAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYV 176
              E     T+  C  ++ LS + VM+G  DL+VLR  R L  R+E        ++YG+ +
Sbjct: 1138 HDERVTAVTVIRCTQIVALSSSCVMAGYCDLDVLRRLRVLHGRMEP-------VNYGAQM 1190

Query: 177  AVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEP 236
            A HMALG+L LGGG Y+LS S  AIAAL+ +F+P+FP  + DNR HLQA R+L+ LAVE 
Sbjct: 1191 ATHMALGILSLGGGRYSLSRSNLAIAALLISFYPQFPRTTQDNRAHLQAARNLWALAVEE 1250

Query: 237  RLLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRINDKRYWPITFQKN 296
            R +IPR+ D    C   + VV  +      +AP LLP    +  V     +YW +    +
Sbjct: 1251 RCIIPRNQDTKQPCIVPLNVVQKSGAVQKLEAPILLPPYDSISSVSTLGDKYWNLKIDLD 1310

Query: 297  RNWKQLQYLLLGQKCIDIK-QRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEES-IF 354
             N    + L   Q    +   RT   S  E+P      L  T     +  W++++ S +F
Sbjct: 1311 NNSDYRELLRESQTLTLMPYDRT---SSKEEPLNLFPKLKDT----SSPLWNLVKTSRLF 1363

Query: 355  SFSSDPAIIKFTESFFNVINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEA 411
              S+ P  +   +   N  ++G       KLL+ + +++L RD+L  + I L   E+
Sbjct: 1364 QSSNSPLNVASLQESNNKTSLG------VKLLLSMDFDNLTRDRLLSLQILLQFFES 1414

Component of the anaphase-promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C is thought to confer substrate specificity and, in the presence of ubiquitin-conjugating E2 enzymes, it catalyzes the formation of protein-ubiquitin conjugates that are subsequently degraded by the 26S proteasome. Mutations to this protein prevent the exit from mitosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53886|APC1_YEAST Anaphase-promoting complex subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APC1 PE=1 SV=2

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 18/170 (10%)

Query: 172  YGSYVAVHMALGLLFLGGGMYTLSTSP-PAIAALVTAFFPKFPTHSLDNRFHLQALRHLY 230
            YG +++ ++ALG LFLG G Y L+TS   +IA L  +  P + T        LQ L+H +
Sbjct: 1491 YGKFISTNLALGFLFLGSGQYALNTSTLESIAFLSMSVLPTYTTP-----HPLQELKHFW 1545

Query: 231  VLAVEPRLLIPRDIDCGN------LCYAHITVVYLNKEQFTAKAPCLLPELHLLEEVRIN 284
             +AVEPR L+ +DI  G+      +       V   +       PCLLP+   ++ +R+ 
Sbjct: 1546 SMAVEPRCLVIKDISTGDAVNNVPIELVVEEDVEKEEVIREISTPCLLPDFSKIKSIRVK 1605

Query: 285  DKRYWPITFQKNRNWKQLQYLLLG------QKCIDIKQRTGCLSYLEDPH 328
               Y+P+     +++    +   G      +K   + +       +ED H
Sbjct: 1606 MHGYFPLEVNFTKDYSASDFFSGGTIIYIQRKSESVFENKASFRNVEDIH 1655

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C is thought to confer substrate specificity and, in the presence of ubiquitin-conjugating E2 enzymes, it catalyzes the formation of protein-ubiquitin conjugates that are subsequently degraded by the 26S proteasome. In early mitosis, the APC/C is activated by CDC20 and targets securin PDS1, the B-type cyclin CLB5, and other anaphase inhibitory proteins for proteolysis, thereby triggering the separation of sister chromatids at the metaphase-to-anaphase transition. In late mitosis and in G1, degradation of CLB5 allows activation of the APC/C by CDH1, which is needed to destroy CDC20 and the B-type cyclin CLB2 to allow exit from mitosis and creating the low CDK state necessary for cytokinesis and for reforming prereplicative complexes in G1 prior to another round of replication.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	472
242024930	2017	anaphase-promoting complex subunit, puta	0.900	0.210	0.555	1e-139
322802454	1542	hypothetical protein SINV_80112 [Solenop	0.963	0.295	0.491	1e-137
328779926	1966	PREDICTED: anaphase-promoting complex su	0.959	0.230	0.473	1e-136
328719905	1949	PREDICTED: anaphase-promoting complex su	0.900	0.218	0.525	1e-134
307203104	1971	Anaphase-promoting complex subunit 1 [Ha	0.966	0.231	0.484	1e-131
345486390	1954	PREDICTED: anaphase-promoting complex su	0.904	0.218	0.498	1e-131
340725932	1964	PREDICTED: anaphase-promoting complex su	0.966	0.232	0.489	1e-130
350397337	1964	PREDICTED: anaphase-promoting complex su	0.966	0.232	0.487	1e-130
383848050	1973	PREDICTED: anaphase-promoting complex su	0.966	0.231	0.485	1e-130
332024418	1982	Anaphase-promoting complex subunit 1 [Ac	0.966	0.230	0.491	1e-129

>gi|242024930|ref|XP_002432879.1| anaphase-promoting complex subunit, putative [Pediculus humanus corporis] gi|212518388|gb|EEB20141.1| anaphase-promoting complex subunit, putative [Pediculus humanus corporis]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/439 (55%), Positives = 326/439 (74%), Gaps = 14/439 (3%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            + AP TQ+LL+ V PD L+LR +A+GLI+W+++ PT  WV SH+P  I PY L KP  NS
Sbjct: 1469 LKAPETQHLLEAVLPDALLLRTLAKGLIMWNEIEPTENWVMSHVPEFIRPYVLVKPEPNS 1528

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
              D+ +D+ETM+QAYCNIVAGACMA+GLRFAGSA   A+ VL++Y  +FTSL  K+I EL
Sbjct: 1529 --DKCIDYETMDQAYCNIVAGACMAIGLRFAGSAYDEAFEVLLSYAKMFTSLLGKNIGEL 1586

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
             G+ TIETCLNVI LSLAMVM+GTGD+EVLR+CRYLR+RV    P ++V++YGS++A HM
Sbjct: 1587 CGRSTIETCLNVITLSLAMVMAGTGDIEVLRLCRYLRSRVG---PTNTVVTYGSHLATHM 1643

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            A+GLLFLGGG YTLSTSP AIAAL+ AF+PK+P HS DNR+HLQA RHLYVLA+E RLL+
Sbjct: 1644 AIGLLFLGGGAYTLSTSPDAIAALLCAFYPKWPIHSNDNRYHLQAFRHLYVLAIESRLLL 1703

Query: 241  PRDIDCGNLCYAHITVVYLNKEQFTA-----KAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID   LCYAHIT V+L+   +       +APCLLPEL  L+EVRI+D RYW I F +
Sbjct: 1704 PRDIDTRTLCYAHITCVFLDVPFYKGNVIKLRAPCLLPELSTLKEVRIDDGRYWSIVFNR 1763

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            ++NW     +L     +D+KQ+ GCLSYLEDP G++++LA TLT +  I W++  E+IF 
Sbjct: 1764 DKNWDDFINILSECSFVDVKQKAGCLSYLEDPQGFRSLLAQTLTSDDVIPWTIRVETIFG 1823

Query: 356  FSSDPAIIKFTESFF-NVINVGSKNEYESKLLI---KVIYESLIRDKLTIVPIWLSIIEA 411
            FSSDP ++ FT+ F     N  +K   ESK+++    + Y  L +DKL+++PIW+S+++A
Sbjct: 1824 FSSDPILVNFTQYFLEGRENENNKENVESKMIVWLTYIAYYCLTKDKLSLLPIWVSLLKA 1883

Query: 412  LSRLPSPLSSYEIWQIKLL 430
               + +  SS ++WQ+KL+
Sbjct: 1884 GQNIFTNASSLDVWQLKLM 1902

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802454|gb|EFZ22804.1| hypothetical protein SINV_80112 [Solenopsis invicta]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/488 (49%), Positives = 339/488 (69%), Gaps = 33/488 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M  P+TQYLL+FV PDFL+LR++A+ LILWDD+ PT  WV SH+P+ +  Y L+KP    
Sbjct: 1053 MQPPDTQYLLEFVRPDFLLLRVLAKSLILWDDIEPTKSWVSSHVPNIVYKYRLQKPTPEV 1112

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             ++  VD ET+NQAYCNI+AGACMA+GLR+AG+ANK+A+  L NY  +FT+LS K+IAEL
Sbjct: 1113 TQN--VDLETINQAYCNIIAGACMALGLRYAGTANKNAFKTLYNYAQMFTALSHKTIAEL 1170

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK T+ETCLNV+LLS A+VM+GTG+L+++RICR++RTRV    P S V++YGS++A HM
Sbjct: 1171 AGKSTVETCLNVVLLSTAVVMAGTGNLDIMRICRHIRTRVG---PASGVVTYGSHLATHM 1227

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGL+FLGGG YTLS SP A+AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1228 ALGLIFLGGGKYTLSNSPNAVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRIIL 1287

Query: 241  PRDIDCGNLCYAHITVVYLNK-----EQFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G  CYA I + + N      ++ + +APCLLP+L  L+++ + D RYW ITF K
Sbjct: 1288 PRDIDTGQYCYATIHLTFENDKEADGQEISLQAPCLLPQLRSLKKIELKDSRYWKITFVK 1347

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
              NW+QL+ +L     + IKQR GCLSYLEDPHG+++++A TLT    IAW+   E + S
Sbjct: 1348 PDNWQQLKNMLERHDFLSIKQRAGCLSYLEDPHGFRSLVAQTLTTENAIAWAARPEHVTS 1407

Query: 356  FSSDPAIIKFTESFFN----------VINVGSKNEYESKL----------LIKVIYESLI 395
            F++D  ++     F             I   S+N+ + K+             ++YE + 
Sbjct: 1408 FTNDKTVLNIVTYFLQWSKKGIIRPESIKYSSQNDVQCKMPEFEQYFLHIFAIIVYECIT 1467

Query: 396  RDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSE--LVAADMALS 453
            +DK+ ++P+WL II+++  +    +S+ IWQIKLL +++ S    ++ E  L++ +  L+
Sbjct: 1468 KDKVNLIPLWLHIIKSIKIIEEQPNSFAIWQIKLLSSQL-SRNSFTNDENPLLSIESMLA 1526

Query: 454  ITHKVIVI 461
            I  K  +I
Sbjct: 1527 IKQKTAII 1534

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779926|ref|XP_001122449.2| PREDICTED: anaphase-promoting complex subunit 1 [Apis mellifera]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/490 (47%), Positives = 345/490 (70%), Gaps = 37/490 (7%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M AP+TQYLLDFV PDFL+LR++A+ LILW+++ PT  WV SH+P+ +  Y L+KP +  
Sbjct: 1408 MQAPDTQYLLDFVRPDFLLLRILAKSLILWNEIEPTKSWVSSHVPNIVYKYRLQKPTSEI 1467

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             ++  VD ETMNQAYCNI+AGACMA+GL+FAGSAN++A+  L NY  +FT+LS K+IAEL
Sbjct: 1468 GQN--VDLETMNQAYCNIIAGACMALGLKFAGSANRNAFKTLYNYTQMFTTLSHKTIAEL 1525

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK TIETCLNV LLS A+VM+GTG+LE++RICR++RTRV    P S+V++YGS++A HM
Sbjct: 1526 AGKSTIETCLNVTLLSAAIVMAGTGNLEIMRICRHIRTRVG---PASNVVTYGSHLATHM 1582

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALG LFLGGG YTLS SP AIAAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1583 ALGFLFLGGGKYTLSNSPSAIAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRVIL 1642

Query: 241  PRDIDCGNLCYAHITVVYLNK-----EQFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            P+DID    CYA + + + ++     +    +APCLLP+L  ++++ + D RYW I F+K
Sbjct: 1643 PKDIDSNQYCYAIVQLTFESEKDAEGQDLILQAPCLLPQLCNIKKIELKDDRYWEIIFEK 1702

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            + NW+QL+ +L   + + +KQR GCL Y+EDPHG+++++A TLT    IAW+   E + S
Sbjct: 1703 DNNWQQLENMLKKCEMLGVKQRAGCLPYIEDPHGFRSLIAQTLTTENVIAWAARPECVTS 1762

Query: 356  FSSDPAIIKFTESFFNVINVGSKNEYESKLLIKV-----------------------IYE 392
            F++D  I+   + F   + +  KN+ +++++IKV                       +YE
Sbjct: 1763 FTNDKTILNIVKCF---LQLPKKNKIKNEIIIKVQSSEQYSEMSEFEKYFLHTFAIIVYE 1819

Query: 393  SLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKV-KSARDLSSSELVAADMA 451
             +I+DK+ ++P+W+++I+++  +    +S+ IWQIKL+ +++ K +   + + L+  +  
Sbjct: 1820 CVIKDKVNLLPLWVNLIKSMEIIEKKPNSFSIWQIKLVSSQMLKKSYTENKNPLLGTESI 1879

Query: 452  LSITHKVIVI 461
            L++  ++  I
Sbjct: 1880 LAMKQRISYI 1889

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328719905|ref|XP_001947364.2| PREDICTED: anaphase-promoting complex subunit 1-like [Acyrthosiphon pisum]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/438 (52%), Positives = 326/438 (74%), Gaps = 13/438 (2%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M+ P++ YLLDF+ P+F++L+M+ARGLI+W+ ++PT +W+E  +P +I  YCL KP+   
Sbjct: 1407 MSIPDSPYLLDFINPEFILLKMLARGLIMWNYILPTKDWIEQFVPQSIQRYCLVKPKPGM 1466

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
                  D ET+NQ YCNIVAG  MAMGLRFAGSAN+ A+N L++YC +F SL +KS+AEL
Sbjct: 1467 ANP---DLETINQTYCNIVAGCSMAMGLRFAGSANEEAFNTLLSYCQMFISLCSKSVAEL 1523

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
             GK TIETC+NV L+SL+MVM+GTGDLEVLRICRYLR+RV   P   SVI+YGS++A HM
Sbjct: 1524 CGKSTIETCINVTLISLSMVMAGTGDLEVLRICRYLRSRVSVSP--HSVITYGSHLATHM 1581

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG YTLST+P AIAAL+ AF+P+FPTHS DNR+HLQA RHLY+LA EPR+++
Sbjct: 1582 ALGLLFLGGGRYTLSTTPEAIAALIIAFYPQFPTHSNDNRYHLQAFRHLYILATEPRIVL 1641

Query: 241  PRDIDCGNLCYAHITVVYLN----KEQF-TAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G+LCY H+ V++L+    K QF T +APCLLP+L LL+E+ ++D RYW I F++
Sbjct: 1642 PRDIDSGDLCYVHLKVIFLDTKYYKNQFYTVRAPCLLPQLSLLKEIHVDDGRYWSIVFER 1701

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            +RNW  L  +L    C+++K + G LSY EDP+GYK+++A  L ++   +W++  E I+ 
Sbjct: 1702 DRNWDNLVNMLNNVSCLNVKHKAGHLSYAEDPNGYKSLIAQNLMLSDKNSWTISPEIIYG 1761

Query: 356  FSSDPAIIKFTESFFNVINVGSKNEYE---SKLLIKVIYESLIRDKLTIVPIWLSIIEAL 412
            FSSDP I++    F ++      N ++   ++   +++++S++ DK+ ++P+W+ I++ L
Sbjct: 1762 FSSDPKIVQMVRYFLDLTGDKVNNPHQITVTRQYAQILFDSIVHDKVFLLPLWMPIMKTL 1821

Query: 413  SRLPSPLSSYEIWQIKLL 430
              LP P SS+  WQ+KL 
Sbjct: 1822 CNLPQPPSSFYCWQLKLF 1839

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307203104|gb|EFN82284.1| Anaphase-promoting complex subunit 1 [Harpegnathos saltator]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/487 (48%), Positives = 342/487 (70%), Gaps = 31/487 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M AP+T+YLL+FV PDFL+LR++A+ LILW+D+ PT  WV SH+P  +  Y L+KP   +
Sbjct: 1415 MQAPDTEYLLEFVRPDFLLLRVLAKSLILWEDIQPTKSWVSSHVPHIVYKYRLQKPAPEA 1474

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             +D  VD ET+NQAYCNI+AGACMA+GLR+AG+ANK+A+  L NY  +FT+LS K+IAEL
Sbjct: 1475 TQD--VDLETINQAYCNIIAGACMALGLRYAGTANKNAFKTLYNYAQMFTALSHKTIAEL 1532

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK T+ETCLNV+LLS A+VM+GTG+L+VLRICR++RTRV    P SSV++YGS++A HM
Sbjct: 1533 AGKSTVETCLNVVLLSTAVVMAGTGNLDVLRICRHVRTRVG---PTSSVVTYGSHLATHM 1589

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG Y LS SP A+AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1590 ALGLLFLGGGRYNLSNSPNAVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRVIL 1649

Query: 241  PRDIDCGNLCYAHITVVYLNK-----EQFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            P+DID G  CYA I + +  +     ++ + +APCLLP+L  L++V + D RYW I F+K
Sbjct: 1650 PKDIDTGQYCYATIHLTFETEKEAEGQEISLQAPCLLPQLRSLKKVELKDSRYWKIIFEK 1709

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            + NW++L+ +L  +  ++IKQR GCLSYLEDPHG++T++A TLT    IAW+   E + +
Sbjct: 1710 HHNWQKLENMLERRDFLNIKQRAGCLSYLEDPHGFRTLMAQTLTTENAIAWAARPEYVTA 1769

Query: 356  FSSDPAIIKFTESFFN---------VINVGSKNEYESKL----------LIKVIYESLIR 396
            F++D  ++     F            I   S+N+ + K+             ++YE + +
Sbjct: 1770 FTNDKTVLNIITYFLQWLKKEIRPENIKHSSQNDIQCKMQEFERYFLHIFAIILYECITK 1829

Query: 397  DKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDL--SSSELVAADMALSI 454
            DK++++P+WL I++ L  +    +S+ +WQIKL+ +++    +    ++ L++ +  L+I
Sbjct: 1830 DKVSLIPLWLHIMKNLKIIEEQPNSFSMWQIKLVSSQISKILNSVDKANPLLSVESMLAI 1889

Query: 455  THKVIVI 461
              K  +I
Sbjct: 1890 KQKTAII 1896

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486390|ref|XP_001606526.2| PREDICTED: anaphase-promoting complex subunit 1 [Nasonia vitripennis]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/455 (49%), Positives = 311/455 (68%), Gaps = 28/455 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M APNTQYLLDFV PDFL+LR++A+ LILWD++ P+  WV SH+P  +  Y L+KP AN 
Sbjct: 1396 MAAPNTQYLLDFVRPDFLLLRILAKSLILWDEIEPSKTWVSSHVPDIVAKYKLQKPTANI 1455

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
               E +D ET+NQAYCNI+AGACMA+GL++AG+ N  A+N L ++  +F +LS KS+AEL
Sbjct: 1456 --SEPIDLETINQAYCNIIAGACMAVGLKYAGTENMIAFNTLYHFLKMFMTLSHKSVAEL 1513

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK TIETCLNV+LL+ ++VM+GTG+L++LR+CRY+RTRV    P +SV++YGS+VA HM
Sbjct: 1514 AGKATIETCLNVVLLAASIVMAGTGNLDILRVCRYMRTRVG---PTNSVVTYGSHVATHM 1570

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALG LFLGGG YTLS  P ++AALV + FPKFPTHS DNR+HLQALRH YVLA EPRLL+
Sbjct: 1571 ALGFLFLGGGSYTLSNDPSSVAALVISLFPKFPTHSNDNRYHLQALRHFYVLATEPRLLL 1630

Query: 241  PRDIDCGNLCYAHITVVYLNKEQFTA-----KAPCLLPELHLLEEVRINDKRYWPITFQK 295
            P+DID    CYA I + + +  Q        KAPCL+P+L  L+++ ++D RYW ITF K
Sbjct: 1631 PKDIDNKKYCYAKIRLTFQSDSQNEGQKIVLKAPCLVPQLDRLDKIELDDDRYWKITFDK 1690

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            +RN+  L+ +L     + +KQR GCLS+ EDP G++T+LA TLT    I W+   + I S
Sbjct: 1691 DRNFDLLKEILNANCVLHVKQRAGCLSHTEDPQGFRTLLAQTLTTEDIIVWTASLKQITS 1750

Query: 356  FSSDPAIIKFTESFFNVINVGSK--------NEYESKL----------LIKVIYESLIRD 397
            F++D  ++ F   F    ++           N+   KL          LI + YE +I+D
Sbjct: 1751 FTTDTTVLNFVNGFLKKGDLNHHTICDSFCMNKMHDKLSSFENHYLQILISMTYECVIKD 1810

Query: 398  KLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQA 432
            K+  +P+W+SI + L  +    ++  IWQIK L +
Sbjct: 1811 KINFLPLWISIYKTLVTIEKEPTTNLIWQIKFLHS 1845

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725932|ref|XP_003401318.1| PREDICTED: anaphase-promoting complex subunit 1-like isoform 2 [Bombus terrestris]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/478 (48%), Positives = 340/478 (71%), Gaps = 22/478 (4%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M AP+TQYLLDFV PDFL+LR++A+ LILW+++ PT  WV SH+P+ +  Y L+KP +  
Sbjct: 1415 MQAPDTQYLLDFVRPDFLLLRILAKSLILWNEIEPTKSWVSSHVPNIVYKYRLQKPTSEI 1474

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             ++  VD ETMNQAYCNI+AGACMA+GL+FAG+ANK+A+  L NY  +FT+LS K+IAEL
Sbjct: 1475 GQN--VDLETMNQAYCNIIAGACMALGLKFAGTANKNAFKTLYNYAQMFTALSHKTIAEL 1532

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK TIETCLNV LLS A+VM+GTG+LE++RICR++RTRV    P S+V++YGS++A HM
Sbjct: 1533 AGKSTIETCLNVTLLSAAVVMAGTGNLEIMRICRHIRTRVG---PASNVVTYGSHLATHM 1589

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG YTLS SP A+AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1590 ALGLLFLGGGKYTLSNSPSAVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRVIL 1649

Query: 241  PRDIDCGNLCYAHITVVYLNK-----EQFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G  CYA + + + ++     +    +APCLLP+L  ++++ + D RYW I F K
Sbjct: 1650 PRDIDSGQYCYATVHLTFESEKDGDGQDLILQAPCLLPQLCTIKKIELKDDRYWEIIFVK 1709

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            + NW+QL+ +L   + +D+KQR GCL Y+EDPHG+++++A TLT    IAW+   E + S
Sbjct: 1710 DHNWQQLENMLKKCETLDVKQRAGCLPYIEDPHGFRSLIAQTLTTENVIAWAARPECVTS 1769

Query: 356  FSSDPAIIKFTESFFNVINVGSK--------NEYESKLLIK---VIYESLIRDKLTIVPI 404
            F++D  I+   + F                  E+E + L     ++YE +I+DK++++P+
Sbjct: 1770 FTNDKTILNIVKCFLQWSKQNKTKTEISFKMQEFEKQFLHTFAIIVYECVIKDKVSLLPL 1829

Query: 405  WLSIIEALSRLPSPLSSYEIWQIKLLQAKV-KSARDLSSSELVAADMALSITHKVIVI 461
            W+++I+++  +    +S+ IWQIKL+ +++ K +   S + ++  +  L+I   +  I
Sbjct: 1830 WVNLIKSMEIIEKEPNSFSIWQIKLVSSQMLKKSYIESKNPVLGTESILAIKQNISYI 1887

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397337|ref|XP_003484846.1| PREDICTED: anaphase-promoting complex subunit 1-like isoform 2 [Bombus impatiens]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/478 (48%), Positives = 340/478 (71%), Gaps = 22/478 (4%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M AP+TQYLLDFV PDFL+LR++A+ LILW+++ PT  WV SH+P+ +  Y L+KP +  
Sbjct: 1415 MQAPDTQYLLDFVRPDFLLLRILAKSLILWNEIEPTKSWVSSHVPNIVYKYRLQKPTSEI 1474

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             ++  VD ETMNQAYCNI+AGACMA+GL+FAG+AN++A+  L NY  +FT+LS K+IAEL
Sbjct: 1475 GQN--VDLETMNQAYCNIIAGACMALGLKFAGTANRNAFKTLYNYAQMFTALSHKTIAEL 1532

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK TIETCLNV LLS A+VM+GTG+LE++RICR++RTRV    P S+V++YGS++A HM
Sbjct: 1533 AGKSTIETCLNVTLLSAAVVMAGTGNLEIMRICRHIRTRVG---PASNVVTYGSHLATHM 1589

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG YTLS SP A+AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1590 ALGLLFLGGGKYTLSNSPSAVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRVIL 1649

Query: 241  PRDIDCGNLCYAHITVVYLNK-----EQFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G  CYA + + + ++     +    +APCLLP+L  ++++ + D RYW I F K
Sbjct: 1650 PRDIDSGQYCYATVHLTFESEKDGDGQDLILQAPCLLPQLCTIKKIELKDDRYWEIIFVK 1709

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            + NW+QL+ +L   + +D+KQR GCL Y+EDPHG+++++A TLT    IAW+   E + S
Sbjct: 1710 DHNWQQLENMLKKCETLDVKQRAGCLPYIEDPHGFRSLIAQTLTTENVIAWAARPECVTS 1769

Query: 356  FSSDPAIIKFTESFFNVINVGSK--------NEYESKLLIK---VIYESLIRDKLTIVPI 404
            F++D  I+   + F                  E+E + L     ++YE +I+DK++++P+
Sbjct: 1770 FTNDKTILNIVKCFLQWPKQNKTKTEISFKMQEFEKQFLHTFAIIVYECVIKDKVSLLPL 1829

Query: 405  WLSIIEALSRLPSPLSSYEIWQIKLLQAKV-KSARDLSSSELVAADMALSITHKVIVI 461
            W+++I+++  +    +S+ IWQIKL+ +++ K +   S + ++  +  L+I   +  I
Sbjct: 1830 WVNLIKSMEIIEKEPNSFSIWQIKLVSSQMLKKSYIESKNPVLGTESILAIKQNISYI 1887

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383848050|ref|XP_003699665.1| PREDICTED: anaphase-promoting complex subunit 1 [Megachile rotundata]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/488 (48%), Positives = 344/488 (70%), Gaps = 32/488 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M AP+TQYLLDFV PDFL+LR++A+ LILWD++ PT  WV SH+P+ +  Y L+KP +  
Sbjct: 1414 MQAPDTQYLLDFVRPDFLLLRILAKSLILWDEIEPTKSWVSSHVPNIVYKYRLQKPTSEI 1473

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             +  +VD ETMNQAYCNI+AGACMA+GL++AG+ANK+A+  L NY  +FT+LS K+IAEL
Sbjct: 1474 AQ--SVDLETMNQAYCNIIAGACMALGLKYAGTANKNAFKTLYNYAQMFTALSHKTIAEL 1531

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK TIETCLNV LLS A+VM+GTG+LE++RICR++RTRV    P SSV++YGS++A HM
Sbjct: 1532 AGKSTIETCLNVTLLSAAVVMAGTGNLEIMRICRHIRTRVG---PASSVVTYGSHLATHM 1588

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG YTLS SP A+AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1589 ALGLLFLGGGKYTLSNSPSAVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRVIL 1648

Query: 241  PRDIDCGNLCYAHITVVYLNKEQFTA-----KAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G  CYA + + + ++++        +APCLLP+L  + ++ + D RYW I F+K
Sbjct: 1649 PRDIDSGQYCYAMVHLTFASEKEAEGQDVVLQAPCLLPQLCNINKLELKDDRYWEIVFEK 1708

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            N NW+QL+ +L   + + +KQR GCL Y+EDPHG+++++A TLT    IAW+   E + S
Sbjct: 1709 NHNWQQLESVLKNCEPLSVKQRAGCLPYIEDPHGFRSLIAQTLTTENVIAWAARPECVTS 1768

Query: 356  FSSDPAIIKFTESFFN-----VINVGSK-------------NEYESKLLIK---VIYESL 394
            F++D  ++   + F        I   +K             +E+E + L     ++YE +
Sbjct: 1769 FTNDKTVLNIVKYFLQWPKKEKIKTENKLKIYKSETQYSDMSEFEEQFLHAFAIIVYECV 1828

Query: 395  IRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQA-KVKSARDLSSSELVAADMALS 453
            I+DK++++P+W++++++L       +S+ IWQIKL+ +  ++     + + L++A+  L+
Sbjct: 1829 IKDKVSLLPLWVTLLKSLEISEKEPNSFSIWQIKLVSSYMLEKPCTENRNPLLSAESVLA 1888

Query: 454  ITHKVIVI 461
            I  K+  I
Sbjct: 1889 IQQKISFI 1896

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024418|gb|EGI64616.1| Anaphase-promoting complex subunit 1 [Acromyrmex echinatior]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/488 (49%), Positives = 340/488 (69%), Gaps = 32/488 (6%)

Query: 1    MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
            M  P+TQYLL+FV PDFL+LR++A+ LILWDD+ PT  WV SH+P+ +  Y L+KP    
Sbjct: 1423 MQPPDTQYLLEFVRPDFLLLRVLAKSLILWDDIEPTKTWVSSHVPNIVYKYRLQKPTPEV 1482

Query: 61   VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL 120
             ++  VD ET+NQAYCNI+AGACMA+GLR+AG+ANK+A+  L NY  +FT+LS K+IAEL
Sbjct: 1483 TQN--VDLETINQAYCNIIAGACMALGLRYAGTANKNAFKTLYNYAQMFTALSHKTIAEL 1540

Query: 121  AGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHM 180
            AGK T+ETCLNV+LLS A+VM+GTG+L+++RICR++RTRV      S V++YGS++A HM
Sbjct: 1541 AGKSTVETCLNVVLLSTAVVMAGTGNLDIMRICRHIRTRVGLT---SGVVTYGSHLATHM 1597

Query: 181  ALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLI 240
            ALGLLFLGGG YTLS SP ++AAL+ + FPKFPTHS DNR+HLQALRHLYVLA EPR+++
Sbjct: 1598 ALGLLFLGGGRYTLSNSPNSVAALIISLFPKFPTHSNDNRYHLQALRHLYVLAAEPRIIL 1657

Query: 241  PRDIDCGNLCYAHITVVY-LNKE----QFTAKAPCLLPELHLLEEVRINDKRYWPITFQK 295
            PRDID G  CYA I + +  +KE    +   +APCLLP+L  L+++ + D RYW ITF K
Sbjct: 1658 PRDIDTGQYCYAIIHLTFETDKEAEGQEINLQAPCLLPQLCSLKKIELKDSRYWKITFLK 1717

Query: 296  NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
            + NW+QL+ +L     + IKQR GCLSYLEDPHG+++++A TLT    IAW+   E + S
Sbjct: 1718 HHNWQQLENMLERHDFLSIKQRAGCLSYLEDPHGFRSLVAQTLTTENAIAWAARPEYVTS 1777

Query: 356  FSSDPAIIKFTESFFN----------VINVGSKNEYESK----------LLIKVIYESLI 395
            F++D  ++    SF             I   S+N+ + K          +   ++YE + 
Sbjct: 1778 FTNDKTVLNVVTSFLQWSKKGMIRPENIKYSSQNDVQCKMPEFEQYFLHMFAIIVYECIT 1837

Query: 396  RDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSE--LVAADMALS 453
            +DK++++P+WL II+++  +    +S+ IWQIKLL +++    + +  E  L++ +  L+
Sbjct: 1838 KDKVSLIPLWLHIIKSIKIIEEQPNSFAIWQIKLLLSQMSRKSNFTDDENPLLSIESMLA 1897

Query: 454  ITHKVIVI 461
            I  K  +I
Sbjct: 1898 IKQKTSII 1905

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	472
FB|FBgn0004391	2030	shtd "shattered" [Drosophila m	0.938	0.218	0.396	2e-88
UNIPROTKB|H0Y564	1452	ANAPC1 "Anaphase-promoting com	0.894	0.290	0.400	8.9e-80
UNIPROTKB|J9P1H2	1943	ANAPC1 "Uncharacterized protei	0.894	0.217	0.400	1.3e-79
UNIPROTKB|E1BAB6	1951	ANAPC1 "Uncharacterized protei	0.894	0.216	0.400	1.7e-79
UNIPROTKB|G3N2V4	1952	ANAPC1 "Uncharacterized protei	0.894	0.216	0.400	1.7e-79
UNIPROTKB|Q9H1A4	1944	ANAPC1 "Anaphase-promoting com	0.894	0.217	0.400	2.1e-79
UNIPROTKB|E1C2U7	1950	ANAPC1 "Uncharacterized protei	0.891	0.215	0.407	3.5e-79
RGD|1306629	1394	Anapc1 "anaphase promoting com	0.894	0.302	0.396	4.3e-79
UNIPROTKB|F1SU85	1718	ANAPC1 "Uncharacterized protei	0.894	0.245	0.394	1.4e-78
MGI|MGI:103097	1944	Anapc1 "anaphase promoting com	0.894	0.217	0.394	5.2e-78

FB|FBgn0004391 shtd "shattered" [Drosophila melanogaster (taxid:7227)]

 Score = 896 (320.5 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 181/457 (39%), Positives = 290/457 (63%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKP---R 57
             M  P+++YLLD V PDFL+LR I+RGLILW DV P   W ++  P  +  + L+ P    
Sbjct:  1460 MQPPDSRYLLDMVRPDFLLLRTISRGLILWQDVRPDNAWFQAQFPRALRAH-LKLPFYEN 1518

Query:    58 ANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSI 117
               + ED  VD+E ++QAYCNI+AGA   +GL++AG+ N  A+  L +    F    ++ +
Sbjct:  1519 EYAPEDYDVDYEAISQAYCNIMAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPM 1578

Query:   118 AELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVA 177
              E AG+ T+E+CL V+L+S+++V +G+G+ E+LRI R+LR+RV  + P    I+YGS++A
Sbjct:  1579 GECAGRTTVESCLMVLLISISLVFAGSGNCEILRIIRFLRSRVGPQYPH---ITYGSHMA 1635

Query:   178 VHMAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPR 237
             +HM+          +T+S +P +IAALV AFFPKFP HS DNR+HLQALRHLYVLAVEPR
Sbjct:  1636 IHMSLGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRYHLQALRHLYVLAVEPR 1695

Query:   238 LLIPRDIDCGNLCYAHITVVYLNKEQFTAK--APCXXXXXXXXXXVRINDKRYWPITFQK 295
             L +PRDID   LC A+I+V+ +   +      APC          V ++D+ YWP+ F++
Sbjct:  1696 LFLPRDIDTNKLCLANISVLEVGATELRRLPIAPCILPVLSTLQQVVVDDENYWPVCFER 1755

Query:   296 NRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFS 355
             +RNW QL+  L     IDIK+RTGCLS+LEDP   K+MLA TLT+ ++I W +    +  
Sbjct:  1756 SRNWDQLEKALEMSAPIDIKKRTGCLSHLEDPDRLKSMLAQTLTMEQSICWQIDMNDLQQ 1815

Query:   356 FSSDPAIIKFTESFFNVINVG-SKNEYESKLLIKVI-YESLIRDKLTIVPIWLSIIEALS 413
             F+S+  + +F     +      S  E   +  + ++ Y ++++D++  +P++L++ + ++
Sbjct:  1816 FASERMVKQFLSRCLDTKGTDLSPPELMKRHQVMLLFYNAVVKDRMHFLPVYLTLYDHVT 1875

Query:   414 RLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADM 450
             +  S  ++ ++WQ+KL+ A +  +++ S   L++ ++
Sbjct:  1876 K--SMPNNIDVWQMKLIDAYLSRSQE-SEHPLISVEL 1909

GO:0005680 "anaphase-promoting complex" evidence=IGI;TAS

GO:0048749 "compound eye development" evidence=IMP

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=IMP

GO:0090302 "mitotic anaphase-promoting complex activity" evidence=IC

GO:0007067 "mitosis" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|H0Y564 ANAPC1 "Anaphase-promoting complex subunit 1" [Homo sapiens (taxid:9606)]

 Score = 811 (290.5 bits), Expect = 8.9e-80, P = 8.9e-80
 Identities = 176/439 (40%), Positives = 268/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:   922 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 981

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:   982 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1040

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G   +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1041 VTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1094

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1095 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1154

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1155 VPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1214

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1215 LSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1274

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +N+G K E    L   V+YE + ++   ++P ++++ +A+ 
Sbjct:  1275 AFTSDPALLSFAEYFCKPTVNMGQKQEILD-LFSSVLYECVTQETPEMLPAYIAMDQAIR 1333

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + E+WQIKL+
Sbjct:  1334 RLGRREMSETSELWQIKLV 1352

GO:0005680 "anaphase-promoting complex" evidence=IEA

UNIPROTKB|J9P1H2 ANAPC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 813 (291.2 bits), Expect = 1.3e-79, P = 1.3e-79
 Identities = 176/439 (40%), Positives = 269/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1386 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1445

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:  1446 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1504

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1505 VTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1558

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1559 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1618

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1619 VPVDVDTNMPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1678

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1679 LSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1738

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +N+G K E    L   V+YE + ++   ++P ++++ +A+ 
Sbjct:  1739 AFTSDPALLSFAEYFCKPTVNMGQKQEILD-LFSSVLYECVTQETPEMLPAYIAMDQAMR 1797

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + E+WQIKL+
Sbjct:  1798 RLGRREMSETSELWQIKLV 1816

GO:0005680 "anaphase-promoting complex" evidence=IEA

UNIPROTKB|E1BAB6 ANAPC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 812 (290.9 bits), Expect = 1.7e-79, P = 1.7e-79
 Identities = 176/439 (40%), Positives = 269/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1394 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1453

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:  1454 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1512

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1513 VTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1566

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1567 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1626

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1627 VPVDVDTNMPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1686

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1687 LSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1746

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +NVG K E    L   V+YE + ++   ++P ++++ +A+ 
Sbjct:  1747 TFTSDPALLSFAEYFCKPTVNVGQKQELLD-LFSSVLYECVTQETPEMLPAYIAMDQAVR 1805

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + ++WQIKL+
Sbjct:  1806 RLGRREMSETSDLWQIKLV 1824

GO:0005680 "anaphase-promoting complex" evidence=IEA

UNIPROTKB|G3N2V4 ANAPC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 812 (290.9 bits), Expect = 1.7e-79, P = 1.7e-79
 Identities = 176/439 (40%), Positives = 269/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1395 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1454

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:  1455 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1513

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1514 VTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1567

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1568 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1627

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1628 VPVDVDTNMPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1687

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1688 LSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1747

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +NVG K E    L   V+YE + ++   ++P ++++ +A+ 
Sbjct:  1748 TFTSDPALLSFAEYFCKPTVNVGQKQELLD-LFSSVLYECVTQETPEMLPAYIAMDQAVR 1806

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + ++WQIKL+
Sbjct:  1807 RLGRREMSETSDLWQIKLV 1825

GO:0070979 "protein K11-linked ubiquitination" evidence=IEA

GO:0005680 "anaphase-promoting complex" evidence=IEA

UNIPROTKB|Q9H1A4 ANAPC1 "Anaphase-promoting complex subunit 1" [Homo sapiens (taxid:9606)]

 Score = 811 (290.5 bits), Expect = 2.1e-79, P = 2.1e-79
 Identities = 176/439 (40%), Positives = 268/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1387 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1446

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:  1447 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1505

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G   +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1506 VTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1559

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1560 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1619

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1620 VPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1679

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1680 LSKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1739

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +N+G K E    L   V+YE + ++   ++P ++++ +A+ 
Sbjct:  1740 AFTSDPALLSFAEYFCKPTVNMGQKQEILD-LFSSVLYECVTQETPEMLPAYIAMDQAIR 1798

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + E+WQIKL+
Sbjct:  1799 RLGRREMSETSELWQIKLV 1817

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005680 "anaphase-promoting complex" evidence=IDA

GO:0070979 "protein K11-linked ubiquitination" evidence=IDA

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=TAS

GO:0051436 "negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051437 "positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051439 "regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

UNIPROTKB|E1C2U7 ANAPC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 809 (289.8 bits), Expect = 3.5e-79, P = 3.5e-79
 Identities = 179/439 (40%), Positives = 264/439 (60%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD+MP+ EWV+S++P  I    +       
Sbjct:  1394 LQAPDTMYLLDFVKPEFLLLRTLARCLILWDDIMPSTEWVDSNVPQIIRENSIPLHATEL 1453

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFT-SLSAKSIAE 119
                E +  ET+ QA+  I+AGAC+++G RFAGS NK A+N L  Y   F  SLSA + A 
Sbjct:  1454 PSSEDLSLETLMQAHVYIIAGACLSLGFRFAGSENKAAFNCLDKYATDFLKSLSAPT-AS 1512

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMV++G+G+L+VL++CR++  +          ++YG ++A H
Sbjct:  1513 IIGHYNLETCLSVLLLSLAMVVAGSGNLKVLQLCRFMHKKTGGE------MNYGFHLAHH 1566

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA +PRLL
Sbjct:  1567 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPVHSTDNRYHLQALRHLYVLAADPRLL 1626

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             IP D+D    CYA I V +   + +  T +   AP           +R+   RYW +   
Sbjct:  1627 IPVDVDSNTPCYALIEVTFKGTQWYAETTEEMMAPTLLPELHLLKQIRVKGPRYWELLID 1686

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              +     L+ +L     + +K R G LSY EDP G+++  A T+T     A S   E I 
Sbjct:  1687 LSNETNHLKSILSKGGVLYVKLRAGQLSYKEDPMGWRSFSAQTITHGNE-ARSFKPEDIS 1745

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +N+G K E        ++YE + ++K  ++P +++I +A+ 
Sbjct:  1746 AFTSDPALLLFAEYFCKPTVNMGQKQEMLD-FFSSILYECVTQEKPEMLPTYIAIDQAVR 1804

Query:   414 RLP-SPLS-SYEIWQIKLL 430
             RL    +S ++E+ QIKL+
Sbjct:  1805 RLERGEMSETFELGQIKLV 1823

GO:0005680 "anaphase-promoting complex" evidence=IEA

GO:0070979 "protein K11-linked ubiquitination" evidence=IEA

RGD|1306629 Anapc1 "anaphase promoting complex subunit 1" [Rattus norvegicus (taxid:10116)]

 Score = 804 (288.1 bits), Expect = 4.3e-79, P = 4.3e-79
 Identities = 174/439 (39%), Positives = 268/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:   837 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 896

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTS-LSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F + LSA + A 
Sbjct:   897 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMNYLSAPN-AS 955

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:   956 VTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1009

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1010 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1069

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA I V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1070 VPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLKQMKVKGPRYWELLID 1129

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1130 LSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1189

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             SF+SDPA++ F E F    +++G K E    L   ++YE + ++   ++P ++++ +AL 
Sbjct:  1190 SFTSDPALLSFAEYFCKPTVSMGQKQEILD-LFSSILYECVAQETPEMLPAYIAMDQALR 1248

Query:   414 RLPS-PLSSY-EIWQIKLL 430
              L    +S+  ++WQIKL+
Sbjct:  1249 SLKKRDMSNTSDLWQIKLI 1267

GO:0005634 "nucleus" evidence=ISO

GO:0005680 "anaphase-promoting complex" evidence=IEA;ISO

GO:0070979 "protein K11-linked ubiquitination" evidence=IEA;ISO

UNIPROTKB|F1SU85 ANAPC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 802 (287.4 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 173/439 (39%), Positives = 267/439 (60%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1161 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1220

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLF-TSLSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A+N L  +   F T LSA + A 
Sbjct:  1221 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLSAPN-AS 1279

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+ +LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1280 VTGPYNLETCLSAVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1333

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1334 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1393

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA + V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1394 VPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLID 1453

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1454 LSKGTQHLKSILAKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1513

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             +F+SDPA++ F E F    +N+  K E    L   ++YE + ++   ++P ++++ +A+ 
Sbjct:  1514 AFTSDPALLSFAEYFCKPTVNMRQKQEILD-LFSSILYECVTQETPEMLPAYIAMDQAVR 1572

Query:   414 RLPS-PLS-SYEIWQIKLL 430
             RL    +S + E+WQIKL+
Sbjct:  1573 RLGRREMSETSELWQIKLV 1591

GO:0005680 "anaphase-promoting complex" evidence=IEA

MGI|MGI:103097 Anapc1 "anaphase promoting complex subunit 1" [Mus musculus (taxid:10090)]

 Score = 798 (286.0 bits), Expect = 5.2e-78, P = 5.2e-78
 Identities = 173/439 (39%), Positives = 268/439 (61%)

Query:     1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANS 60
             + AP+T YLLDFV P+FL+LR +AR LILWDD++P  +WV+S++P  I    +       
Sbjct:  1387 LRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIEL 1446

Query:    61 VEDEAVDFETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTS-LSAKSIAE 119
                E ++ ET++QA+  I+AGAC+++G RFAGS N  A++ L  +   F + LSA + A 
Sbjct:  1447 PCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFSCLHKFAKDFMNYLSAPN-AS 1505

Query:   120 LAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVH 179
             + G + +ETCL+V+LLSLAMVM+G+G+L+VL++CR+L  +          ++YG ++A H
Sbjct:  1506 VTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGE------MNYGFHLAHH 1559

Query:   180 MAXXXXXXXXXMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLL 239
             MA          Y+LSTS  +IAAL+ A +P FP HS DNR+HLQALRHLYVLA EPRLL
Sbjct:  1560 MALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLL 1619

Query:   240 IPRDIDCGNLCYAHITVVYLNKEQF--TAK---APCXXXXXXXXXXVRINDKRYWPITFQ 294
             +P D+D    CYA I V Y   + +  T +   AP           +++   RYW +   
Sbjct:  1620 VPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLKQMKVKGPRYWELLID 1679

Query:   295 KNRNWKQLQYLLLGQKCIDIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIF 354
              ++  + L+ +L     + +K R G LSY EDP G++++LA T+    + A +   E+I 
Sbjct:  1680 LSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETIS 1739

Query:   355 SFSSDPAIIKFTESFFN-VINVGSKNEYESKLLIKVIYESLIRDKLTIVPIWLSIIEALS 413
             SF+SDPA++ F E F    +++G K E    L   ++YE + ++   ++P ++++ +AL 
Sbjct:  1740 SFTSDPALLSFAEYFCKPTVSMGPKQEILD-LFSSILYECVAQETPEMLPAYIAMDQALR 1798

Query:   414 RLPS-PLS-SYEIWQIKLL 430
              L    +S + ++WQIKL+
Sbjct:  1799 SLKKRDMSDTSDLWQIKLI 1817

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005680 "anaphase-promoting complex" evidence=ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0070979 "protein K11-linked ubiquitination" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	472
KOG1858|consensus	1496		100.0
KOG2005|consensus	878		99.88
COG5110	881	RPN1 26S proteasome regulatory complex component [	99.73
KOG2005|consensus	878		98.22
COG5110	881	RPN1 26S proteasome regulatory complex component [	97.68
PF01851	35	PC_rep: Proteasome/cyclosome repeat; InterPro: IPR	97.35
KOG2062|consensus	929		97.17
COG5116	926	RPN2 26S proteasome regulatory complex component [	95.7
PF01851	35	PC_rep: Proteasome/cyclosome repeat; InterPro: IPR	93.96
KOG1858|consensus	1496		92.96
KOG2062|consensus	929		91.22
COG5116	926	RPN2 26S proteasome regulatory complex component [	84.59

>KOG1858|consensus

Probab=100.00  E-value=1.4e-92  Score=797.61  Aligned_cols=412  Identities=43%  Similarity=0.725  Sum_probs=377.1

Q ss_pred             CCCCCchhhhhccCchHHHHHHHHhhccccccCCCChHHHhhcCCccchhhhccCCCCCCCCCccCChhhhhhhHHHHHH
Q psy2630           1 MNAPNTQYLLDFVCPDFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVA   80 (472)
Q Consensus         1 l~~P~T~~~Ld~vRPD~llLR~lAr~LImWd~I~pt~eWi~s~iP~~i~~~~~~~~~~~~~~~~~~d~e~~~qay~~Iia   80 (472)
                      |++|+|+|+||++|||++++|++||||||||+|.|+.+||++|+|++|++....        .+++|.|++.|+|+||+|
T Consensus      1067 l~~p~t~yll~~vrPd~l~lR~~a~~lImW~~I~p~~~wv~~~vp~~ir~~~~~--------~~dvd~~tl~q~~~~~~a 1138 (1496)
T KOG1858|consen 1067 LRPPDTRYLLDFVRPDFLLLRVIARNLIMWDRIKPDYDWVKSQVPDVIREQADL--------QEDVDLETLSQAYVNILA 1138 (1496)
T ss_pred             cCCCchhhHHhhcchHHHHHHHHHhhhhHHHhhCchHHHHHhhCCHHHHHhhhh--------hhhhhhhhHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999987432        268999999999999999


Q ss_pred             HHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhh---hhhHHHHHHHHHHHhHHHHccCCcHHHHHHHHHHH
Q psy2630          81 GACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAG---KFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLR  157 (472)
Q Consensus        81 GaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~---r~t~~~cl~v~~lsls~VmAGTGdl~vlr~lR~L~  157 (472)
                      |||||||||||||+|..|+++|..+++.|+++.+.|.....+   +.|++.|++++++|+|||||||||+||||++|+||
T Consensus      1139 Gac~slgLrfagt~n~~aknil~s~v~~fl~l~~~P~~~~~~~~~~~tv~~cl~v~i~sls~vmagSgdleVlr~~r~Lr 1218 (1496)
T KOG1858|consen 1139 GACFSLGLRFAGTGNLKAKNILNSFVDDFLRLCSLPLKSNDGRVTAVTVERCLSVLIISLSMVMAGSGDLEVLRRLRFLR 1218 (1496)
T ss_pred             HHHHHHHhhhcccCChhHHHHHHHHHHHHHHHhhccCccCCCcccchhHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHH
Confidence            999999999999999999999999999999999999877655   99999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcccccCCChHHHHHHHHHHccCCCCCCCChhhhHHHHHHHHHhhcCCe
Q psy2630         158 TRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPR  237 (472)
Q Consensus       158 ~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~Tl~tS~~aIA~Llia~yP~fP~~~~DN~~HLQAlRHlwvLAvepR  237 (472)
                      +++++.    .+++||.|||+|||+|+||||||||||+|||.+||+|+|+|||.||.+++|||||+||+||||+||+|||
T Consensus      1219 ~~~~~~----~~~~yg~~ma~h~alGil~lG~Gr~t~s~s~~sIa~ll~slfp~fP~~~~Dnr~hlqalR~l~~La~e~r 1294 (1496)
T KOG1858|consen 1219 SRTSPY----GHMNYGAQMATHMALGILFLGGGRYTISTSNLSIAALLISLFPHFPISPSDNRYHLQALRHLYVLAVEPR 1294 (1496)
T ss_pred             HhccCC----CcccchhHHHHHHhhceeEecCcccccCCCcHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHhcccc
Confidence            999854    8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeeCCCCceEEEEEEEEEEcCceeE--EecccccCCCCccceEEEcCCCeeeEEEEcCCChHHHHHHHcCCceEEEe
Q psy2630         238 LLIPRDIDCGNLCYAHITVVYLNKEQFT--AKAPCLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCIDIK  315 (472)
Q Consensus       238 ~Lv~~Dvdt~~~v~vpv~v~~~~~~~~~--~~tPcLLP~~~~I~~i~v~~~~Y~p~~id~~~~~~~l~~~l~~~~~l~Vk  315 (472)
                      ||+|+|+||+.||++|++|++|.+....  -.+||+||+.+.+++|.+++++|||+.|+.+.++.+++    ++++++|+
T Consensus      1295 ~lip~didt~~~~l~~~~v~~k~~~~~~~~~iap~lLP~~~~l~~v~v~g~~yw~~~iel~~~~~~~~----ks~~l~i~ 1370 (1496)
T KOG1858|consen 1295 LLIPRDIDTGQPCLAPLNVVQKGTTLYSLTEIAPILLPEYSTLSSVSVLGPNYWPVKIELSFNSQHLE----KSNTLDIN 1370 (1496)
T ss_pred             cccccccccCceEEEeeeEEecccchhhhhhcCCeeccccccchhhhhcCCccceEEEecccchhhcc----cccccccc
Confidence            9999999999999999999999988744  49999999999999999999999999999999987754    78999999


Q ss_pred             cCCCCCCCCCCcccchhHHHHHhhccCcccccccccccccccCchHHHHHHHHhhccCCC-CCchhHHHHHHHHHHHHHh
Q psy2630         316 QRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINV-GSKNEYESKLLIKVIYESL  394 (472)
Q Consensus       316 rr~g~lsY~~dp~g~~s~l~~~l~~~~~~~~~~~~~~~~~fs~d~~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~l~ec~  394 (472)
                      .|.+.++|.+||.++++++++++.          +..  .|++||.+++|++++|+...+ .++. ..     .=+|+|+
T Consensus      1371 ~~~~~~~~~eD~~~~~~l~a~t~~----------~~~--~F~s~~s~~~~~~~~~~~~~n~~~~~-~~-----ld~~~~~ 1432 (1496)
T KOG1858|consen 1371 PRDGTLSREEDSDLFKSLLATTLP----------PTS--LFSSEPSLLNFASLCCDNNVNSLGDK-LL-----LDFFDNV 1432 (1496)
T ss_pred             ccccceeecCChhHhHHHHhhcCC----------cch--hccCCcHHHHHHHhhcccccccccch-hh-----hhhhhhh
Confidence            999999999999999999998776          222  899999999999999998543 3333 22     2299999


Q ss_pred             hhcccccchHHHHHHHHHhcCCCCCCcchhhhHHHHHHHHhhcccCCCCCcccHHHHHHHHHHHHHH
Q psy2630         395 IRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIKLLQAKVKSARDLSSSELVAADMALSITHKVIVI  461 (472)
Q Consensus       395 ~~d~~~~L~~~~~l~~~~~~~~~~~~~~~lw~lkl~~~~~~~~~~~~~~~~i~~~f~~~lk~~~~~~  461 (472)
                      ++|.++.+|+            .-++..+.||.+++.+|.++   ..+....+.+.++.+...+++.
T Consensus      1433 t~~~~e~~~~------------~~~~~~~~~~~~~l~~~~k~---~~e~~n~S~~l~~~~~~~~~~~ 1484 (1496)
T KOG1858|consen 1433 TRDRIESLSV------------LLQNFESFWQGKLLAKLLKR---AEELLNLSRDLLQDEQNRLTSE 1484 (1496)
T ss_pred             HHHHHHhhhh------------hhccccchhhHHHHHHHHHH---HHHhhcccHHHHHHHhhhccce
Confidence            9999999998            23477889999999999884   4556778888888888777653

>KOG2005|consensus

Probab=99.88  E-value=4.9e-23  Score=220.35  Aligned_cols=203  Identities=24%  Similarity=0.350  Sum_probs=179.0

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhh----------hhh---hHhhhhhhhHHHHHHH---HHHHhHH
Q psy2630          76 CNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLS----------AKS---IAELAGKFTIETCLNV---ILLSLAM  139 (472)
Q Consensus        76 ~~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~----------~~~---~~~~~~r~t~~~cl~v---~~lsls~  139 (472)
                      +++++-|..|||......|..+.++++++|.+.-+|..          ++|   +.++++|.+++...+|   .++||++
T Consensus       622 ~avLgiAliAMgeeig~eM~lR~f~h~l~yge~~iRravPLal~llsvSNPq~~vlDtLsk~shd~D~eva~naIfamGL  701 (878)
T KOG2005|consen  622 LAVLGIALIAMGEEIGSEMVLRHFGHLLHYGEPHIRRAVPLALGLLSVSNPQVNVLDTLSKFSHDGDLEVAMNAIFAMGL  701 (878)
T ss_pred             chhhhhhhhhhhhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHhhhccCCCcchHHHHHHHhccCcchHHHHHHHHHhcc
Confidence            48999999999999999999999999999999888764          344   4567899999988887   6899999


Q ss_pred             HHccCCcHHHHHHHHHHHhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcccccCC--------ChHHHHHHHHHHccC
Q psy2630         140 VMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLST--------SPPAIAALVTAFFPK  211 (472)
Q Consensus       140 VmAGTGdl~vlr~lR~L~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~Tl~t--------S~~aIA~Llia~yP~  211 (472)
                      |.|||+|.++.++||+|.+++.      ++  -...|.++.|+|+++||+|+.|+++        ++.+.|+|+..+|-.
T Consensus       702 iGAGTnNARla~mLrqlaSYyy------Kd--~~~Lf~vriAQGL~hlGKGtltl~p~~~dr~ll~p~alagl~t~~~~~  773 (878)
T KOG2005|consen  702 IGAGTNNARLAQMLRQLASYYY------KD--SKALFVVRIAQGLVHLGKGTLTLSPFHSDRQLLMPTALAGLLTTVFAL  773 (878)
T ss_pred             ccCCcchHHHHHHHHHHHHHHh------cc--chhHHHHHHHHHHHHhcCCceecccccchhhhhchHHHHHHHHHHHHH
Confidence            9999999999999999999998      33  4679999999999999999999998        679999999999988


Q ss_pred             C-CCCCCChhhhHHHHHHHHHhhcCCeeEEEeeCCCCceEEEEEEEEE------EcCce------eEEecccccCCCCcc
Q psy2630         212 F-PTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVY------LNKEQ------FTAKAPCLLPELHLL  278 (472)
Q Consensus       212 f-P~~~~DN~~HLQAlRHlwvLAvepR~Lv~~Dvdt~~~v~vpv~v~~------~~~~~------~~~~tPcLLP~~~~I  278 (472)
                      . ++..-.+++|.  +-++.++|+.||+++++| +.+||+.|+|||+.      +.|++      ++++||+||.+.   
T Consensus       774 LD~~i~l~~~~H~--~ly~Lv~amqprm~~T~~-e~~~pl~V~VRVGqaVdvVGqaGrPKtITg~qTHtTPVlLahg---  847 (878)
T KOG2005|consen  774 LDANIILLVKSHY--LLYFLVLAMQPRMLVTVD-EELEPLPVNVRVGQAVDVVGQAGRPKTITGFQTHTTPVLLAHG---  847 (878)
T ss_pred             hccchhccchHHH--HHHHHHHhhCceEEEeec-ccCccccceeeccchhhhhhccCCCceecceeccCcceecccc---
Confidence            7 44334458897  888999999999999999 89999999999986      56665      899999999999   


Q ss_pred             ceEEEcCCCeeeEE
Q psy2630         279 EEVRINDKRYWPIT  292 (472)
Q Consensus       279 ~~i~v~~~~Y~p~~  292 (472)
                      +|.|.+.+.|-|++
T Consensus       848 eRAElatd~y~p~t  861 (878)
T KOG2005|consen  848 ERAELATDEYLPLT  861 (878)
T ss_pred             hhhhhccccccccc
Confidence            49999999998864

>COG5110 RPN1 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=1.2e-17  Score=176.46  Aligned_cols=209  Identities=19%  Similarity=0.239  Sum_probs=170.3

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhh----------hhh---hHhhhhhhhHHHHHHH--
Q psy2630          68 FETMNQAYCNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLS----------AKS---IAELAGKFTIETCLNV--  132 (472)
Q Consensus        68 ~e~~~qay~~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~----------~~~---~~~~~~r~t~~~cl~v--  132 (472)
                      .|+..+.| ..++-|.+|||......|..+.++++++|-..-+|..          +.|   +.+.+.|++++..+++  
T Consensus       616 ~ea~ie~~-a~Lg~AliamGedig~eMvlRhf~h~mhyg~~hiR~~~PLa~gils~SnPQm~vfDtL~r~shd~dl~v~~  694 (881)
T COG5110         616 EEALIESL-ALLGCALIAMGEDIGSEMVLRHFSHSMHYGSSHIRSVLPLAYGILSPSNPQMNVFDTLERSSHDGDLNVII  694 (881)
T ss_pred             hHHHHHHH-HHhhhHHhhhcchhhHHHHHHHhhhHhhcCcHHHHHHHHHHHhcccCCCcchHHHHHHHHhccccchhHHH
Confidence            37777777 8999999999999999999999999999987766542          334   3457899999988888  


Q ss_pred             -HHHHhHHHHccCCcHHHHHHHHHHHhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcccccCCC--------hHHHHH
Q psy2630         133 -ILLSLAMVMSGTGDLEVLRICRYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTS--------PPAIAA  203 (472)
Q Consensus       133 -~~lsls~VmAGTGdl~vlr~lR~L~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~Tl~tS--------~~aIA~  203 (472)
                       .++||++|.|||.|.++.++||++.+++..      +  -...+.++.|+|+|.||+|++|+++=        +.+.|+
T Consensus       695 ntIfamGLiGAGT~NaRlaqlLrQlaSYY~k------e--s~aLfv~riAQGLl~LGKGtmti~p~~~d~~~l~~~~~ag  766 (881)
T COG5110         695 NTIFAMGLIGAGTLNARLAQLLRQLASYYYK------E--SKALFVLRIAQGLLSLGKGTMTISPLYFDKTTLMPKNTAG  766 (881)
T ss_pred             HHHHHhhccccCcchHHHHHHHHHHHHHHhh------c--cchhhHHHHHHHHHHhcCCceeeccccccchhhcchhHHH
Confidence             489999999999999999999999999983      3  35688999999999999999999983        478899


Q ss_pred             HHHHHccCC-CCCCCChhhhHHHHHHHHHhhcCCeeEEEeeCCCCceEEEEEEEEE------EcCce------eEEeccc
Q psy2630         204 LVTAFFPKF-PTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLCYAHITVVY------LNKEQ------FTAKAPC  270 (472)
Q Consensus       204 Llia~yP~f-P~~~~DN~~HLQAlRHlwvLAvepR~Lv~~Dvdt~~~v~vpv~v~~------~~~~~------~~~~tPc  270 (472)
                      |+...|-.. |...---.+|  ++-++...++.||.+++.. +.|+|+.|.|||+.      +.|++      ++++||+
T Consensus       767 l~ttv~~lld~~~f~L~ssH--~l~y~l~~~irp~~~vtl~-e~ge~i~vnvRVGqav~tVGqaGrPKkitgw~ThttPV  843 (881)
T COG5110         767 LFTTVFMLLDSSIFPLVSSH--ALMYFLLCQIRPQKYVTLS-EKGEPIKVNVRVGQAVNTVGQAGRPKKITGWQTHTTPV  843 (881)
T ss_pred             HHHHHHHHHccccchhhhhH--HHHHHHHhccCcceEEEec-CCCceeeeEEeecchhhhhhccCCCceeeeeeecCcce
Confidence            988887443 2111111234  2667778999999999999 89999999999985      44543      8999999


Q ss_pred             ccCCCCccceEEEcCCCeeeE
Q psy2630         271 LLPELHLLEEVRINDKRYWPI  291 (472)
Q Consensus       271 LLP~~~~I~~i~v~~~~Y~p~  291 (472)
                      ||.+-   +|.+.+.+.|-+.
T Consensus       844 lL~h~---eRAEl~td~y~~~  861 (881)
T COG5110         844 LLSHK---ERAELDTDEYNVC  861 (881)
T ss_pred             eeccc---hhhhcccccccch
Confidence            99988   4888888888664

>KOG2005|consensus

Probab=98.22  E-value=2.3e-06  Score=93.78  Aligned_cols=93  Identities=26%  Similarity=0.357  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHHHHHHHHhHHHHccCCcHHHHHH-HHHH
Q psy2630          78 IVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRI-CRYL  156 (472)
Q Consensus        78 IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl~v~~lsls~VmAGTGdl~vlr~-lR~L  156 (472)
                      +..|++|++|+.||||.+++++..|...+..             ++... ....++.+|++||.+||+|-+|... +..+
T Consensus       468 ~ri~aIlGLglayaGsq~e~V~~lL~Pi~~d-------------~~~~~-ev~~~aslsLG~IfvGscn~dvts~ilqtl  533 (878)
T KOG2005|consen  468 HRIGAILGLGLAYAGSQREEVLELLSPIMFD-------------TKSPM-EVVAFASLSLGMIFVGSCNEDVTSSILQTL  533 (878)
T ss_pred             eehHHhhhhHHhhcCCchHHHHHHHhHHhcC-------------CCCch-hHHHHHHhhcceeEEecCChHHHHHHHHHH
Confidence            5789999999999999999998755433222             22222 2345688999999999999999976 8888


Q ss_pred             HhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCc
Q psy2630         157 RTRVESRPPLSSVISYGSYVAVHMALGLLFLGGG  190 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG  190 (472)
                      .+|...+    .+..|+.+++  +++|+||+|+|
T Consensus       534 mekse~E----l~d~~~RFL~--LGL~llflgkq  561 (878)
T KOG2005|consen  534 MEKSETE----LEDQWFRFLA--LGLALLFLGKQ  561 (878)
T ss_pred             HHhhhhh----hhchHHHHHH--HHHHHHHhccc
Confidence            8886533    5678999999  99999999999

>COG5110 RPN1 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Probab=97.68  E-value=7.8e-05  Score=80.73  Aligned_cols=95  Identities=20%  Similarity=0.260  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHHHHHHHHhHHHHccCCcHHHHHH-HHH
Q psy2630          77 NIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRI-CRY  155 (472)
Q Consensus        77 ~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl~v~~lsls~VmAGTGdl~vlr~-lR~  155 (472)
                      -+++.|++++|+.|+||.++++++.|....-.             +...+ .....+.++++.|++||+|-++... ++.
T Consensus       465 k~~~aaiLGlg~afsGt~~eevl~lL~Pi~~s-------------td~pi-e~~~~asltLg~vFvGtcngD~ts~ilqt  530 (881)
T COG5110         465 KHVIAAILGLGAAFSGTQAEEVLELLQPIMFS-------------TDSPI-EVVFFASLTLGSVFVGTCNGDLTSLILQT  530 (881)
T ss_pred             HHHHHHHhhhHHhhcCCcHHHHHHHhhhhhcC-------------CCCcH-HHHHHHHHhhhheEeeccCchHHHHHHHH
Confidence            46788999999999999999999988653221             11112 1234578999999999999999877 777


Q ss_pred             HHhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcc
Q psy2630         156 LRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGM  191 (472)
Q Consensus       156 L~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~  191 (472)
                      +-+|...+    .++.++.+||  +++|.||.|.|.
T Consensus       531 f~Er~~~e----~~tqw~RFla--LgLa~Lf~g~~d  560 (881)
T COG5110         531 FVERGKIE----SETQWFRFLA--LGLASLFYGRKD  560 (881)
T ss_pred             HHHhhhhh----hhhHHHHHHH--HHHHHHHccccc
Confidence            77776533    6788999999  899999999987

>PF01851 PC_rep: Proteasome/cyclosome repeat; InterPro: IPR002015 A weakly conserved repeat module of unknown function, which occurs in two regulatory subunits of the 26S-proteasome and in one subunit of the APC-complex (cyclosome) []

Probab=97.35  E-value=0.00022  Score=50.46  Aligned_cols=28  Identities=36%  Similarity=0.624  Sum_probs=24.2

Q ss_pred             HHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q psy2630          81 GACMAMGLRFAGSANKHAYNVLINYCNL  108 (472)
Q Consensus        81 GaclalGLkyAGt~n~~a~~~Ll~yld~  108 (472)
                      |||+||||.||||.|+++.+.|.+|+..
T Consensus         1 gA~lgLGl~~aGs~~~~~~~~L~~~l~~   28 (35)
T PF01851_consen    1 GAILGLGLIYAGSGNEEVLDLLRPYLSD   28 (35)
T ss_dssp             HHHHHHHHHTTTT--HHHHHHHHHHHCT
T ss_pred             CcHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence            8999999999999999999999998765

; PDB: 4ADY_A.

>KOG2062|consensus

Probab=97.17  E-value=0.0028  Score=70.98  Aligned_cols=162  Identities=19%  Similarity=0.175  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHH-----HHHhhhhhhhhHhhhhhhhHHHHHH---------------HHHHHh
Q psy2630          78 IVAGACMAMGLRFAGSANKHAYNVLINYC-----NLFTSLSAKSIAELAGKFTIETCLN---------------VILLSL  137 (472)
Q Consensus        78 IiaGaclalGLkyAGt~n~~a~~~Ll~yl-----d~fl~~~~~~~~~~~~r~t~~~cl~---------------v~~lsl  137 (472)
                      +-.|..+++|+.|.||+|..|...|+||.     |...|-.-...+ .+--..-++|..               -+++||
T Consensus       535 lR~~Gm~t~alAy~GTgnnkair~lLh~aVsD~nDDVrRaAVialG-FVl~~dp~~~~s~V~lLses~N~HVRyGaA~AL  613 (929)
T KOG2062|consen  535 LRYGGMYTLALAYVGTGNNKAIRRLLHVAVSDVNDDVRRAAVIALG-FVLFRDPEQLPSTVSLLSESYNPHVRYGAAMAL  613 (929)
T ss_pred             hhhhhHHHHHHHHhccCchhhHHHhhcccccccchHHHHHHHHHhe-eeEecChhhchHHHHHHhhhcChhhhhhHHHHH
Confidence            46789999999999999999999999984     222221100000 000111122222               268999


Q ss_pred             HHHHccCCcHHHHHHHHHHHhcccC----------------CC----C-------------CCCCCChhhHHHHHHHHHH
Q psy2630         138 AMVMSGTGDLEVLRICRYLRTRVES----------------RP----P-------------LSSVISYGSYVAVHMALGL  184 (472)
Q Consensus       138 s~VmAGTGdl~vlr~lR~L~~~~~~----------------~~----~-------------~~~~~~YG~hmA~~mAlGl  184 (472)
                      ++.-||||+-+....|--|-+....                .+    |             ..++-.-=..|-.-+|+|+
T Consensus       614 GIaCAGtG~~eAi~lLepl~~D~~~fVRQgAlIa~amIm~Q~t~~~~pkv~~frk~l~kvI~dKhEd~~aK~GAilAqGi  693 (929)
T KOG2062|consen  614 GIACAGTGLKEAINLLEPLTSDPVDFVRQGALIALAMIMIQQTEQLCPKVNGFRKQLEKVINDKHEDGMAKFGAILAQGI  693 (929)
T ss_pred             hhhhcCCCcHHHHHHHhhhhcChHHHHHHHHHHHHHHHHHhcccccCchHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh
Confidence            9999999999999888877664321                00    0             0011111224445688999


Q ss_pred             HhhCCcccccCC-------ChHHHHHHHHHHccCCCCCCCChhhhHHHHHHHHHhhcCCeeEEEeeCCCCceE
Q psy2630         185 LFLGGGMYTLST-------SPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNLC  250 (472)
Q Consensus       185 LFLGgG~~Tl~t-------S~~aIA~Llia~yP~fP~~~~DN~~HLQAlRHlwvLAvepR~Lv~~Dvdt~~~v  250 (472)
                      +=-||-..|++-       +-.||++|++.+.=         + +--+|-||-+||..|-|++-.+-|-..|.
T Consensus       694 ldaGGrNvtislqs~tg~~~~~~vvGl~~Flq~---------W-yWfPL~~flSLaf~PT~vigln~dLk~Pk  756 (929)
T KOG2062|consen  694 LDAGGRNVTISLQSMTGHTKLDAVVGLVVFLQY---------W-YWFPLIHFLSLAFTPTTVIGLNEDLKIPK  756 (929)
T ss_pred             hhcCCceEEEEEeccCCCCchHHHHHHHHHHHH---------H-HHHHHHHHHHHhcCcceEEEeccccCCcc
Confidence            999998877752       34799999887632         1 22348999999999999999996655553

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Probab=95.70  E-value=0.084  Score=58.30  Aligned_cols=160  Identities=19%  Similarity=0.153  Sum_probs=102.3

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHH-----HHHhhhhhhh--------------hHhhhhhhhHHH-HHHHHHHHhH
Q psy2630          79 VAGACMAMGLRFAGSANKHAYNVLINYC-----NLFTSLSAKS--------------IAELAGKFTIET-CLNVILLSLA  138 (472)
Q Consensus        79 iaGaclalGLkyAGt~n~~a~~~Ll~yl-----d~fl~~~~~~--------------~~~~~~r~t~~~-cl~v~~lsls  138 (472)
                      -.|..|++|+.|+||+|..+..+|+||.     |...|..-..              ..+.+. .+++- .-.-.+++|+
T Consensus       533 Ry~G~fs~alAy~GTgn~~vv~~lLh~avsD~nDDVrRAAViAlGfvc~~D~~~lv~tvelLs-~shN~hVR~g~AvaLG  611 (926)
T COG5116         533 RYNGVFSLALAYVGTGNLGVVSTLLHYAVSDGNDDVRRAAVIALGFVCCDDRDLLVGTVELLS-ESHNFHVRAGVAVALG  611 (926)
T ss_pred             hhccHHHHHHHHhcCCcchhHhhhheeecccCchHHHHHHHHheeeeEecCcchhhHHHHHhh-hccchhhhhhhHHHhh
Confidence            4688999999999999999999999983     3332221110              001111 11111 1122678899


Q ss_pred             HHHccCCcHHHHHHHHHHHhcccC------------------CCCC---------------CCCCChhhHHHHHHHHHHH
Q psy2630         139 MVMSGTGDLEVLRICRYLRTRVES------------------RPPL---------------SSVISYGSYVAVHMALGLL  185 (472)
Q Consensus       139 ~VmAGTGdl~vlr~lR~L~~~~~~------------------~~~~---------------~~~~~YG~hmA~~mAlGlL  185 (472)
                      +..||||+--....|-.|......                  ...+               .++-.=-..+-.-+|+|+.
T Consensus       612 iacag~G~~~a~diL~~L~~D~~dfVRQ~AmIa~~mIl~Q~n~~Lnp~v~~I~k~f~~vI~~Khe~glaklGA~laqGi~  691 (926)
T COG5116         612 IACAGTGDKVATDILEALMYDTNDFVRQSAMIAVGMILMQCNPELNPNVKRIIKKFNRVIVDKHESGLAKLGAVLAQGIS  691 (926)
T ss_pred             hhhcCCccHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcCcccChhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhhhh
Confidence            999999999888887777654321                  0000               0111112244566899999


Q ss_pred             hhCCcccccCC-------ChHHHHHHHHHHccCCCCCCCChhhhHHHHHHHHHhhcCCeeEEEeeCCCCce
Q psy2630         186 FLGGGMYTLST-------SPPAIAALVTAFFPKFPTHSLDNRFHLQALRHLYVLAVEPRLLIPRDIDCGNL  249 (472)
Q Consensus       186 FLGgG~~Tl~t-------S~~aIA~Llia~yP~fP~~~~DN~~HLQAlRHlwvLAvepR~Lv~~Dvdt~~~  249 (472)
                      --||-..|++-       +-.+|++|++.+-          -.|--+|-||-+|+.-|--++..|-.-.-|
T Consensus       692 ~aGGRNvti~l~natG~l~~~~ivGlv~Flq----------yWYWfPL~hf~SLsf~Pttvigi~~s~~~p  752 (926)
T COG5116         692 EAGGRNVTISLRNATGILSADRIVGLVLFLQ----------YWYWFPLIHFVSLSFLPTTVIGIRGSQAIP  752 (926)
T ss_pred             hcCCceEEEEEecccCcccHHHHHHHHHHHH----------HHHHHHHHHHHhhhcCcceeecccccccCc
Confidence            98888777753       4588999988752          122334899999999998888887443333

>PF01851 PC_rep: Proteasome/cyclosome repeat; InterPro: IPR002015 A weakly conserved repeat module of unknown function, which occurs in two regulatory subunits of the 26S-proteasome and in one subunit of the APC-complex (cyclosome) []

Probab=93.96  E-value=0.063  Score=37.90  Aligned_cols=26  Identities=31%  Similarity=0.574  Sum_probs=20.9

Q ss_pred             HHHHhHHHHccCCcHHHHHHHHHHHh
Q psy2630         133 ILLSLAMVMSGTGDLEVLRICRYLRT  158 (472)
Q Consensus       133 ~~lsls~VmAGTGdl~vlr~lR~L~~  158 (472)
                      +++++++++|||||-+++..|+..-.
T Consensus         2 A~lgLGl~~aGs~~~~~~~~L~~~l~   27 (35)
T PF01851_consen    2 AILGLGLIYAGSGNEEVLDLLRPYLS   27 (35)
T ss_dssp             HHHHHHHHTTTT--HHHHHHHHHHHC
T ss_pred             cHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            57999999999999999999887643

; PDB: 4ADY_A.

>KOG1858|consensus

Probab=92.96  E-value=0.093  Score=62.98  Aligned_cols=113  Identities=14%  Similarity=0.203  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHH-HHHHHHhHHHHccCCcHHHHHHHHHH
Q psy2630          78 IVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCL-NVILLSLAMVMSGTGDLEVLRICRYL  156 (472)
Q Consensus        78 IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl-~v~~lsls~VmAGTGdl~vlr~lR~L  156 (472)
                      +--|..++|+--|-||++.+....|..|+..+++-.+.       ...+..-+ -.+++++||+.+|||+-.+...|=.=
T Consensus       887 tSvgLLlGlsaS~~GtmD~ki~Kllsvhl~allp~ts~-------El~i~~~iQtAaIvGlGlLy~gS~h~~iaevL~~E  959 (1496)
T KOG1858|consen  887 TSVGLLLGLSASYRGTMDAKITKLLSVHLSALLPATST-------ELNIPLLIQTAAIVGLGLLYAGSAHRRIAEVLLAE  959 (1496)
T ss_pred             eeHHHHhhhhHhhcCccchhHHHHHHHHHhhcCCCCcc-------cccCchhhhhhhhhhhhheecCcchHHHHHHHHHH
Confidence            34589999999999999999999999999988754221       11111112 23689999999999999988875544


Q ss_pred             HhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcccccCCChH
Q psy2630         157 RTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLSTSPP  199 (472)
Q Consensus       157 ~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~Tl~tS~~  199 (472)
                      -+|-... ++ .-..=|--+|.-.++|+..||.|...++-+|.
T Consensus       960 igr~~~~-e~-~~~rE~Y~laAG~SLGLi~LG~G~~~~g~~d~ 1000 (1496)
T KOG1858|consen  960 IGRPPNP-EN-VLEREGYKLAAGFSLGLINLGRGSNLPGMSDL 1000 (1496)
T ss_pred             hcCCCCc-cc-chhhhhhhhhcCcccceeeeccCCCCcchhcc
Confidence            4443211 00 00234668899999999999999987776654

>KOG2062|consensus

Probab=91.22  E-value=0.41  Score=54.35  Aligned_cols=76  Identities=17%  Similarity=0.176  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhh----------hh----------hhhHHHH----HHH
Q psy2630          77 NIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAEL----------AG----------KFTIETC----LNV  132 (472)
Q Consensus        77 ~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~----------~~----------r~t~~~c----l~v  132 (472)
                      +.-+||.+|+||=+||.+.. +.+.|+++++.    ...+...+          ++          |..+-..    -..
T Consensus       394 y~EGGalyAlGLIhA~hG~~-~~~yL~~~Lk~----~~~e~v~hG~cLGlGLa~mGSa~~eiYe~lKevLy~D~AvsGEA  468 (929)
T KOG2062|consen  394 YKEGGALYALGLIHANHGRG-ITDYLLQQLKT----AENEVVRHGACLGLGLAGMGSANEEIYEKLKEVLYNDSAVSGEA  468 (929)
T ss_pred             ccccchhhhhhccccCcCcc-HHHHHHHHHHh----ccchhhhhhhhhhccchhcccccHHHHHHHHHHHhccchhhhhH
Confidence            46899999999999999988 66666655543    33221110          00          1111111    123


Q ss_pred             HHHHhHHHHccCCcHHHHHHHHHHH
Q psy2630         133 ILLSLAMVMSGTGDLEVLRICRYLR  157 (472)
Q Consensus       133 ~~lsls~VmAGTGdl~vlr~lR~L~  157 (472)
                      +.+||+|+|.||++.+++.-++.-.
T Consensus       469 Agi~MGl~mlGt~~~eaiedm~~Ya  493 (929)
T KOG2062|consen  469 AGIAMGLLMLGTANQEAIEDMLTYA  493 (929)
T ss_pred             HHHhhhhHhhCcCcHHHHHHHHHHh
Confidence            6899999999999999998555433

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

Probab=84.59  E-value=1.2  Score=49.57  Aligned_cols=64  Identities=23%  Similarity=0.359  Sum_probs=44.8

Q ss_pred             HHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHHHHHHHHhHHHHccCCcHHHHHHHHHHHhcc
Q psy2630          81 GACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRICRYLRTRV  160 (472)
Q Consensus        81 GaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl~v~~lsls~VmAGTGdl~vlr~lR~L~~~~  160 (472)
                      |+|++|||--.||+|.+..+-|-..+..             ++.   ..-..++++|+|+|-||+..+.+.-+|...+.+
T Consensus       430 G~~LGiGL~~MgSan~eiye~lKe~l~n-------------D~a---~~geAa~~gMGl~mLgt~s~eai~dm~tya~ET  493 (926)
T COG5116         430 GVCLGIGLINMGSANREIYEKLKELLKN-------------DRA---LLGEAAVYGMGLLMLGTWSVEAIEDMRTYAGET  493 (926)
T ss_pred             HHHhhhcchhcccccHHHHHHHHHHHhc-------------chh---hhhhhhhhccceeeecCCCHHHHHHHHHHhcch
Confidence            7888888888888888776655332211             221   223457899999999999999998887765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	472
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.0 bits (160), Expect = 1e-11
 Identities = 70/466 (15%), Positives = 132/466 (28%), Gaps = 139/466 (29%)

Query: 32  DVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAYCNIVAGACMAMGLRFA 91
           D     +  +S +    I + +     ++V      F T+      +V         +F 
Sbjct: 34  DCKDVQDMPKSILSKEEIDHIIMSK--DAVSGTLRLFWTLLSKQEEMVQ--------KFV 83

Query: 92  GSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLR 151
               +      INY  L + +  +               + +            D +V  
Sbjct: 84  EEVLR------INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY----------NDNQVFA 127

Query: 152 ICRYLRTRVES----RPPLSSVISYGSYVAVH-MALGLLFLGGGMYTLSTSPPAIAAL-- 204
             +Y  +R++     R  L  +      V +  +       G G   +     A+     
Sbjct: 128 --KYNVSRLQPYLKLRQALLELRP-AKNVLIDGVL------GSGKTWV-----ALDVCLS 173

Query: 205 --VTAFFPKFPTH--SLDNRF-------HLQALRHLYVLAVEPRLLIPRDIDCGNLCYAH 253
             V      F     +L N          LQ L +     ++P      D         H
Sbjct: 174 YKVQCKMD-FKIFWLNLKNCNSPETVLEMLQKLLYQ----IDPNWTSRSDHSSNIKLRIH 228

Query: 254 ITVVYLNKEQFTAKAP-CLLPELHLLEEVRINDKRYWPITFQKNRNWKQLQYLLLGQKCI 312
                L +   +     CLL    +L  V+  + + W                       
Sbjct: 229 SIQAELRRLLKSKPYENCLL----VLLNVQ--NAKAW--------------------NAF 262

Query: 313 DIKQRTGCLSYLEDPHGYKTMLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNV 372
           ++     C          K +L    T  K +   +   +    S D   +  T      
Sbjct: 263 NL----SC----------KILL---TTRFKQVTDFLSAATTTHISLDHHSMTLTPD---- 301

Query: 373 INVGSKNEYESK-LLIKVI---YESLIRDKLTIVPIWLSIIEALSRLPSPLSSYEIWQIK 428
                    E K LL+K +    + L R+ LT  P  LSII     +   L++++ W+  
Sbjct: 302 ---------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--IRDGLATWDNWK-H 349

Query: 429 LLQAKVKSARDLSSSELVAADM-----ALS-------ITHKVIVIY 462
           +   K+ +  + S + L  A+       LS       I   ++ + 
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 65/471 (13%), Positives = 125/471 (26%), Gaps = 187/471 (39%)

Query: 16  DFLMLRMIARGLILWDDVMPTVEWVESHIPSTIIPYCLRKPRANSVEDEAVDFETMNQAY 75
             L  +     L++  +V                               A +        
Sbjct: 236 RLLKSKPYENCLLVLLNV-----QNAKAW-------------------NAFNLS------ 265

Query: 76  CNIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILL 135
           C I                             L T+   +    L+   T    L+   +
Sbjct: 266 CKI-----------------------------LLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 136 SLAMVMSGTGDLEVLRIC-RYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTL 194
           +L      T D EV  +  +YL  R +  P                             L
Sbjct: 297 TL------TPD-EVKSLLLKYLDCRPQDLPRE--------------------------VL 323

Query: 195 STSPPAIAALVTAFFPKFPTH------------------SLDNRFHLQA--LRHLYV-LA 233
           +T+P  + +++                            SL+    L+    R ++  L+
Sbjct: 324 TTNPRRL-SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV---LEPAEYRKMFDRLS 379

Query: 234 VEPR-LLIPRDIDCGNLCYAHITVVYLNKEQFTAKAPCLLPELH---LLEE------VRI 283
           V P    IP  +    L      +++ +  +       ++ +LH   L+E+      + I
Sbjct: 380 VFPPSAHIPTIL----LS-----LIWFDVIKSDVMV--VVNKLHKYSLVEKQPKESTISI 428

Query: 284 NDKRYWPITFQKNRNWKQLQYLLLGQKCID--IKQRTGCLSYLEDPH---------GYKT 332
               Y  +   K  N   L      +  +D     +T     L  P+         G+  
Sbjct: 429 PS-IYLELK-VKLENEYALH-----RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-- 479

Query: 333 MLAHTLTINKTIAWSVLEESIFSFSSDPAIIKFTESFFNVINVGSKNEYESKLL-----I 387
              H   I      ++       F       +F E    + +  +       +L     +
Sbjct: 480 ---HLKNIEHPERMTLFRMVFLDF-------RFLEQ--KIRHDSTAWNASGSILNTLQQL 527

Query: 388 KVIYESLIRDKLTIVPIWLSIIEALSR-LPSP-----LSSY-EIWQIKLLQ 431
           K  Y+  I D     P +  ++ A+   LP        S Y ++ +I L+ 
Sbjct: 528 K-FYKPYICDN---DPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	472
4ady_A	963	RPN2, 26S proteasome regulatory subunit RPN2; prot	99.17
4ady_A	963	RPN2, 26S proteasome regulatory subunit RPN2; prot	97.95

>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N

Probab=99.17  E-value=3.4e-11  Score=136.37  Aligned_cols=143  Identities=17%  Similarity=0.221  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHHHHHHHHhHHHHccCCcH---HHHHHH
Q psy2630          77 NIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDL---EVLRIC  153 (472)
Q Consensus        77 ~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl~v~~lsls~VmAGTGdl---~vlr~l  153 (472)
                      .|--|+++|+|+-.|||.+.+|.++|..+...             .   ....-.-+++|||+|++||.|.   +|...+
T Consensus       627 ~VR~gAalALGli~aGn~~~~aid~L~~L~~D-------------~---d~~Vrq~Ai~ALG~Ig~gtnna~~~rva~~l  690 (963)
T 4ady_A          627 HVRCGTAFALGIACAGKGLQSAIDVLDPLTKD-------------P---VDFVRQAAMIALSMILIQQTEKLNPQVADIN  690 (963)
T ss_dssp             HHHHHHHHHHHHHTSSSCCHHHHHHHHHHHTC-------------S---SHHHHHHHHHHHHHHSTTCCTTTCTTHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcHHHHHHHHHHccC-------------C---CHHHHHHHHHHHHHHhcCCccccchHHHHHH
Confidence            47889999999999999999999988665422             0   0011123689999999999999   999999


Q ss_pred             HHHHhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCcccccCC--------ChHHHHHHHHHHccCCCCCCCChhhhHHH
Q psy2630         154 RYLRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMYTLST--------SPPAIAALVTAFFPKFPTHSLDNRFHLQA  225 (472)
Q Consensus       154 R~L~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~Tl~t--------S~~aIA~Llia~yP~fP~~~~DN~~HLQA  225 (472)
                      |+|.+.+..     .+..-...|.+.+|+|++.+|||..|++.        +..|+|+|++...-         .||. .
T Consensus       691 ~~L~~~~~d-----k~~d~~~~fga~iAqGll~aG~~n~tis~~~s~~~~~~~~a~~Gl~~f~q~---------wyw~-p  755 (963)
T 4ady_A          691 KNFLSVITN-----KHQEGLAKFGACVAQGIMNAGGRNVTIQLENADTGTLDTKSVVGLVMFSQF---------WYWF-P  755 (963)
T ss_dssp             HHHHHHHHC-----SSSCHHHHHHHHHHHHHHTTGGGTEEECSBCTTTCCBCHHHHHHHHHHTTT---------TTCG-G
T ss_pred             HHHHHHHhc-----ccccHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCCCHHHHHHHHHHHHH---------HHHH-H
Confidence            999998862     23235678889999999999999999997        36899999987411         2331 2


Q ss_pred             HHHHHHhhcCCeeEEEeeCCCCceE
Q psy2630         226 LRHLYVLAVEPRLLIPRDIDCGNLC  250 (472)
Q Consensus       226 lRHlwvLAvepR~Lv~~Dvdt~~~v  250 (472)
                      |-|+-+||..|||+|++|-+..++-
T Consensus       756 l~~~lsla~~Pt~li~l~e~dL~~p  780 (963)
T 4ady_A          756 LAHFLSLSFTPTTVIGIRGSDQAIP  780 (963)
T ss_dssp             GGGGGGGGEEECBEEEEETTTTBEE
T ss_pred             HHHHHHHhcCCcEEEEecccccCCC
Confidence            6788899999999999995255543

>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N

Probab=97.95  E-value=2.1e-05  Score=89.54  Aligned_cols=90  Identities=23%  Similarity=0.299  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHhhhhhhhhHhhhhhhhHHHHHHHHHHHhHHHHccCCcHHHHHHH-HH
Q psy2630          77 NIVAGACMAMGLRFAGSANKHAYNVLINYCNLFTSLSAKSIAELAGKFTIETCLNVILLSLAMVMSGTGDLEVLRIC-RY  155 (472)
Q Consensus        77 ~IiaGaclalGLkyAGt~n~~a~~~Ll~yld~fl~~~~~~~~~~~~r~t~~~cl~v~~lsls~VmAGTGdl~vlr~l-R~  155 (472)
                      .|..|||+|||+-|+||+|+++.+.|...+..             +..   ..-..+++|||+||.||||-++++.| ..
T Consensus       452 ~ir~gAaLGLGla~~GS~~eev~e~L~~~L~d-------------d~~---~~~~~AalALGli~vGTgn~~ai~~LL~~  515 (963)
T 4ady_A          452 VLLHGASLGIGLAAMGSANIEVYEALKEVLYN-------------DSA---TSGEAAALGMGLCMLGTGKPEAIHDMFTY  515 (963)
T ss_dssp             HHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHT-------------CCH---HHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-------------CCH---HHHHHHHHHHhhhhcccCCHHHHHHHHHH
Confidence            47789999999999999999999998765542             110   11147899999999999999999874 44


Q ss_pred             HHhcccCCCCCCCCCChhhHHHHHHHHHHHhhCCccc
Q psy2630         156 LRTRVESRPPLSSVISYGSYVAVHMALGLLFLGGGMY  192 (472)
Q Consensus       156 L~~~~~~~~~~~~~~~YG~hmA~~mAlGlLFLGgG~~  192 (472)
                      +.+..+      .  .+-..  .-+|||++++|....
T Consensus       516 ~~e~~~------e--~vrR~--aalgLGll~~g~~e~  542 (963)
T 4ady_A          516 SQETQH------G--NITRG--LAVGLALINYGRQEL  542 (963)
T ss_dssp             HHHCSC------H--HHHHH--HHHHHHHHTTTCGGG
T ss_pred             HhccCc------H--HHHHH--HHHHHHhhhCCChHH
Confidence            444322      2  23333  448999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00