Psyllid ID: psy2656

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFAV
Secondary Structure (PSIPRED)
cHHHHHHcccccccccHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHccccccHEEEEEEHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mhtklaqtflptAVKFHYIWNLRDLDNVFQGMLFasgdcvrssSQLVRLWMHEASrvygdkmvdkKDIETFNKMLVENIKKVFAV
Flexible Loop (DISEMBL)
mhtklaqtflptAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEasrvygdkmvdKKDIETFNKMLVENIKKVFAV
Low Complexity Region (SEG)
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFAV
Disordered region (IsUnstruct)
*****AQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKV***
Disordered Region (DISOPRED)
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFA*
Disordered Region (DISEMBL)
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFAV
Disordered Region (DISPRO)
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFAV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIKKVFAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q69Z23	4481	Dynein heavy chain 17, ax	yes	N/A	0.976	0.018	0.578	5e-26
P39057	4466	Dynein beta chain, ciliar	N/A	N/A	0.976	0.018	0.578	1e-25
P23098	4466	Dynein beta chain, ciliar	N/A	N/A	0.976	0.018	0.566	2e-25
Q9UFH2	4485	Dynein heavy chain 17, ax	yes	N/A	0.976	0.018	0.554	9e-25
Q9NYC9	4486	Dynein heavy chain 9, axo	no	N/A	0.964	0.018	0.573	3e-24
Q96DT5	4523	Dynein heavy chain 11, ax	no	N/A	0.964	0.018	0.548	9e-24
Q9P225	4427	Dynein heavy chain 2, axo	no	N/A	0.976	0.018	0.433	2e-15
P0C6F1	4456	Dynein heavy chain 2, axo	no	N/A	0.976	0.018	0.421	5e-15
Q39610	4499	Dynein alpha chain, flage	N/A	N/A	1.0	0.018	0.4	6e-15
Q39565	4568	Dynein beta chain, flagel	N/A	N/A	0.976	0.018	0.421	1e-14

>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 69/83 (83%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K++ TFLPTA+KFHYI+NLRDL N+FQG+LF++ + +++   LVRLW+HEA RVYGD
Sbjct: 2619 LHQKVSATFLPTAIKFHYIFNLRDLSNIFQGILFSTAEILKTPLDLVRLWLHEAERVYGD 2678

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            KMVD+KD ET +++ + ++KK F
Sbjct: 2679 KMVDEKDQETLHRVTIASVKKFF 2701

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.
Mus musculus (taxid: 10090)

>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 64/83 (77%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+AQ+FLPTA+KFHY++NLRDL NVFQG+L++  D ++S     RLWMHE  RVYGD
Sbjct: 2639 LHKKVAQSFLPTAIKFHYVFNLRDLSNVFQGLLYSGSDLLKSPIDFARLWMHECQRVYGD 2698

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            KM++ +DIE F K++ E  KK F
Sbjct: 2699 KMINDQDIEAFEKLVFEYAKKFF 2721

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Anthocidaris crassispina (taxid: 7629)

>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 47/83 (56%), Positives = 65/83 (78%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+AQ+FLPTA+KFHY++NLRDL NVFQG+L++  D +++     RLWMHE  RVYGD
Sbjct: 2639 LHKKVAQSFLPTAIKFHYVFNLRDLSNVFQGLLYSGPDLLKAPIDFARLWMHECQRVYGD 2698

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            KM++ +DIE F K+++E  KK F
Sbjct: 2699 KMINDQDIEAFEKLVLEYAKKFF 2721

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Tripneustes gratilla (taxid: 7673)

>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2

 Score =  112 bits (279), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 66/83 (79%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+  TFLPTA+KFHY++NLRDL N+FQG+LF++ + +++   LVRLW+HE  RVYGD
Sbjct: 2621 LHQKITATFLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVLKTPLDLVRLWLHETERVYGD 2680

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            KMVD+KD ET +++ + + KK F
Sbjct: 2681 KMVDEKDQETLHRVTMASTKKFF 2703

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 67/82 (81%)

Query: 2    HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
            H K+A TFLPT +KFHYI+NLRD  N+FQG+LF+S +CV+S+  L+RL++HE++RVY DK
Sbjct: 2659 HQKIATTFLPTGIKFHYIFNLRDFANIFQGILFSSVECVKSTWDLIRLYLHESNRVYRDK 2718

Query: 62   MVDKKDIETFNKMLVENIKKVF 83
            MV++KD + F+K+  E +KK F
Sbjct: 2719 MVEEKDFDLFDKIQTEVLKKTF 2740

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3

 Score =  108 bits (270), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 62/82 (75%)

Query: 2    HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
            H  +   FLPTA+KFHYI+NLRDL NVFQG+LFAS +C++    L+ LW+HE++RVYGDK
Sbjct: 2697 HQTMMCNFLPTAIKFHYIFNLRDLSNVFQGILFASPECLKGPLDLIHLWLHESARVYGDK 2756

Query: 62   MVDKKDIETFNKMLVENIKKVF 83
            ++DKKD + F + ++E   K F
Sbjct: 2757 LIDKKDCDLFQRRMLETAYKYF 2778

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 52/83 (62%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            M+  + Q FLPT  K HY++NLRD+  VFQGML A+ D   + S + RLW+HE  RV+ D
Sbjct: 2595 MYNTVVQRFLPTPTKMHYLFNLRDISKVFQGMLRANKDFHDTKSSITRLWIHECFRVFSD 2654

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            ++VD  D E F  ++ + +   F
Sbjct: 2655 RLVDAADTEAFMGIISDKLGSFF 2677

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 53/83 (63%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            ++  + Q FLPT  K HY++NLRD+  VFQGML A+ D   + + + RLW+HE  RV+ D
Sbjct: 2624 VYNTVVQRFLPTPAKIHYLFNLRDISKVFQGMLRANKDFHDTKASITRLWIHECFRVFSD 2683

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            ++VD  D+E F  +L + +   F
Sbjct: 2684 RLVDTADMEAFMGILSDKLGTFF 2706

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Mus musculus (taxid: 10090)

>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 56/85 (65%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H +++QTF  TA+ FHY + +R L NVFQG+L ++ +   S ++  +LW+HE+ RVY D
Sbjct: 2547 LHDRVSQTFRKTAINFHYEFTVRHLANVFQGLLMSTPEAFNSPTKWGKLWLHESERVYAD 2606

Query: 61   KMVDKKDIETFNKMLVENIKKVFAV 85
            ++V   D++ +NK      KK F+V
Sbjct: 2607 RLVSLYDLDAYNKAATAIAKKYFSV 2631

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Chlamydomonas reinhardtii (taxid: 3055)

>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 53/83 (63%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H  +   FLP+AVKFHY +NLRDL N+ QG+  A  +  R   ++ RLW+HE  RV+ D
Sbjct: 2708 LHRNVMHNFLPSAVKFHYQFNLRDLSNITQGLTRAIKEYYREPVKVARLWVHECERVFRD 2767

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            +M+++ D+  F++  V   KK F
Sbjct: 2768 RMINEADMAKFDEFRVAVTKKFF 2790

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Chlamydomonas reinhardtii (taxid: 3055)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
260817705	1228	hypothetical protein BRAFLDRAFT_126866 [	0.976	0.067	0.602	2e-27
363740971	4453	PREDICTED: dynein heavy chain 17, axonem	0.988	0.018	0.630	3e-27
443683389	4463	hypothetical protein CAPTEDRAFT_175142 [	0.976	0.018	0.614	1e-26
347966349	4552	AGAP001672-PA [Anopheles gambiae str. PE	0.976	0.018	0.602	2e-26
198418605	3506	PREDICTED: similar to Beta heavy chain o	0.976	0.023	0.662	3e-26
328707060	4331	PREDICTED: dynein heavy chain 17, axonem	0.976	0.019	0.602	3e-26
270009401	4573	hypothetical protein TcasGA2_TC008640 [T	0.976	0.018	0.578	3e-26
312384035	3990	hypothetical protein AND_02671 [Anophele	0.976	0.020	0.590	4e-26
360043897	3232	putative dynein heavy chain [Schistosoma	0.976	0.025	0.566	6e-26
256052362	3254	dynein heavy chain [Schistosoma mansoni]	0.976	0.025	0.566	6e-26

>gi|260817705|ref|XP_002603726.1| hypothetical protein BRAFLDRAFT_126866 [Branchiostoma floridae] gi|229289048|gb|EEN59737.1| hypothetical protein BRAFLDRAFT_126866 [Branchiostoma floridae]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 71/83 (85%)

Query: 1   MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
           +H K+  TFLPTA+KFHYI+NLRDL N+FQG+LFA  +C+++    +RLW+HEA+RVYGD
Sbjct: 368 LHQKITSTFLPTAIKFHYIFNLRDLSNIFQGILFAGPECIKTPLDFIRLWIHEANRVYGD 427

Query: 61  KMVDKKDIETFNKMLVENIKKVF 83
           K+VD+KD+E FNK++V+N++K F
Sbjct: 428 KLVDEKDMEMFNKVVVDNVRKYF 450

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363740971|ref|XP_001232017.2| PREDICTED: dynein heavy chain 17, axonemal [Gallus gallus]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 69/84 (82%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            MH +++ TFLPTA+KFHY++NLRDL N+FQG+LF++ +C+RS   LVRLWMHEA RVYGD
Sbjct: 2626 MHQRVSATFLPTAIKFHYLFNLRDLSNIFQGLLFSTPECLRSPVDLVRLWMHEAERVYGD 2685

Query: 61   KMVDKKDIETFNKMLVENIKKVFA 84
            K+VD KD ++F KML +  KK FA
Sbjct: 2686 KLVDDKDQKSFGKMLTDTCKKFFA 2709

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443683389|gb|ELT87666.1| hypothetical protein CAPTEDRAFT_175142 [Capitella teleta]

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 70/83 (84%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +HTK++QTFLPTA+KFHY +NLRDL N+FQGMLFA+ DC +  ++LVRLW+HEA RVY D
Sbjct: 2633 LHTKISQTFLPTAIKFHYTFNLRDLSNIFQGMLFAAPDCCKEPTKLVRLWIHEAMRVYRD 2692

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+V+  D ETF+K++ +++KK F
Sbjct: 2693 KLVEPADAETFDKVMKDSVKKTF 2715

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|347966349|ref|XP_321424.5| AGAP001672-PA [Anopheles gambiae str. PEST] gi|333470100|gb|EAA01375.5| AGAP001672-PA [Anopheles gambiae str. PEST]

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 70/83 (84%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +HTK+ Q FLPTAVKFHY++N+RDL N+FQGMLF +G+     +QL+RLW HEA+RVYGD
Sbjct: 2724 LHTKMGQMFLPTAVKFHYVFNMRDLANIFQGMLFGNGETCAEPNQLIRLWAHEATRVYGD 2783

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+V+++DI+ FNK++V+ +KK F
Sbjct: 2784 KLVEERDIDNFNKLIVDVVKKSF 2806

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198418605|ref|XP_002124244.1| PREDICTED: similar to Beta heavy chain of outer-arm axonemal dynein ATPase, partial [Ciona intestinalis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 67/83 (80%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+  TFLPTA+KFHYI+NLRDL N+FQG+LF++ DCV+  S LVRLWMHEASRVY D
Sbjct: 2633 LHGKINSTFLPTAIKFHYIFNLRDLSNIFQGILFSTSDCVKCISDLVRLWMHEASRVYCD 2692

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K++DKKDIE F K  +E  KK F
Sbjct: 2693 KLIDKKDIEIFEKNKLEFAKKFF 2715

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328707060|ref|XP_001947345.2| PREDICTED: dynein heavy chain 17, axonemal-like [Acyrthosiphon pisum]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 68/83 (81%)

Query: 2    HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
            H K+   FLPTA+KFHYI+NLRD+ NVFQG++FA+G+CV S+S  +RLW+HE SR+Y DK
Sbjct: 2503 HEKILSVFLPTAIKFHYIFNLRDMSNVFQGIMFATGECVASTSSFIRLWLHETSRIYSDK 2562

Query: 62   MVDKKDIETFNKMLVENIKKVFA 84
            +++KKD ETF+K + E IKK F+
Sbjct: 2563 LIEKKDQETFSKTITEQIKKSFS 2585

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009401|gb|EFA05849.1| hypothetical protein TcasGA2_TC008640 [Tribolium castaneum]

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 70/83 (84%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+A +FLPTAVKFHY + LRDL N+FQGMLF +GD +++ + L+RLWMHE  RVYGD
Sbjct: 2746 LHQKVAASFLPTAVKFHYTFTLRDLSNIFQGMLFTTGDAIKTQTDLIRLWMHECGRVYGD 2805

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+V+K+D++T+ K+++E++KK F
Sbjct: 2806 KLVEKRDLDTYKKLVIESVKKSF 2828

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312384035|gb|EFR28864.1| hypothetical protein AND_02671 [Anopheles darlingi]

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 49/83 (59%), Positives = 70/83 (84%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +HTK+ Q FLPTAVKFHY++N+RDL N+FQGMLF +G+  +  + L+RLW HEA+RVYGD
Sbjct: 2304 LHTKMGQMFLPTAVKFHYVFNMRDLANIFQGMLFGNGETCQEPNHLIRLWAHEATRVYGD 2363

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+V+++DI+ FNK++V+ +KK F
Sbjct: 2364 KLVEERDIDNFNKLIVDVVKKSF 2386

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|360043897|emb|CCD81443.1| putative dynein heavy chain [Schistosoma mansoni]

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/83 (56%), Positives = 68/83 (81%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+A  FLPTA+KFHYI+NLRDL N+FQG+LF++ +C+R  S L+RLWMHE  RVY D
Sbjct: 1402 LHAKVASVFLPTAIKFHYIFNLRDLSNIFQGLLFSTNECIRQPSDLIRLWMHECERVYSD 1461

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+++++D+E+F K+L++  KK F
Sbjct: 1462 KLIEREDVESFQKILIDITKKCF 1484

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|256052362|ref|XP_002569741.1| dynein heavy chain [Schistosoma mansoni]

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/83 (56%), Positives = 68/83 (81%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
            +H K+A  FLPTA+KFHYI+NLRDL N+FQG+LF++ +C+R  S L+RLWMHE  RVY D
Sbjct: 1424 LHAKVASVFLPTAIKFHYIFNLRDLSNIFQGLLFSTNECIRQPSDLIRLWMHECERVYSD 1483

Query: 61   KMVDKKDIETFNKMLVENIKKVF 83
            K+++++D+E+F K+L++  KK F
Sbjct: 1484 KLIEREDVESFQKILIDITKKCF 1506

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
UNIPROTKB|G3N2A4	2549	Bt.104534 "Uncharacterized pro	0.964	0.032	0.609	2.4e-23
UNIPROTKB|F1MJJ0	4496	Bt.104534 "Uncharacterized pro	0.964	0.018	0.609	4.5e-23
MGI|MGI:1917176	4481	Dnahc17 "dynein, axonemal, hea	0.976	0.018	0.578	7.3e-23
UNIPROTKB|F1N724	4523	DNAH11 "Uncharacterized protei	0.964	0.018	0.585	7.4e-23
UNIPROTKB|F1LRU2	4480	Dnah17 "Protein Dnah17" [Rattu	0.976	0.018	0.590	4e-22
UNIPROTKB|F1PDR4	4485	DNAH9 "Uncharacterized protein	0.964	0.018	0.560	6.6e-22
RGD|2323582	1957	LOC100363013 "mCG140381-like"	0.964	0.041	0.585	6.7e-22
UNIPROTKB|F1PN88	4427	DNAH17 "Uncharacterized protei	0.976	0.018	0.578	8.3e-22
UNIPROTKB|K7EK91	4457	DNAH17 "Dynein heavy chain 17,	0.976	0.018	0.554	8.3e-22
UNIPROTKB|Q9UFH2	4485	DNAH17 "Dynein heavy chain 17,	0.976	0.018	0.554	8.4e-22

UNIPROTKB|G3N2A4 Bt.104534 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 286 (105.7 bits), Expect = 2.4e-23, P = 2.4e-23
 Identities = 50/82 (60%), Positives = 70/82 (85%)

Query:     2 HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
             H K+A TFLPTA+KFHYI+NLRD  N+FQG+LF+S +CVRSS  LV L++HE++RVY DK
Sbjct:   722 HQKIATTFLPTAIKFHYIFNLRDFANIFQGILFSSVECVRSSQDLVNLYLHESNRVYRDK 781

Query:    62 MVDKKDIETFNKMLVENIKKVF 83
             MV++KD++ F+K+ V+ +KK+F
Sbjct:   782 MVEEKDLDLFDKIQVDVVKKIF 803

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1MJJ0 Bt.104534 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 286 (105.7 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 50/82 (60%), Positives = 70/82 (85%)

Query:     2 HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
             H K+A TFLPTA+KFHYI+NLRD  N+FQG+LF+S +CVRSS  LV L++HE++RVY DK
Sbjct:  2669 HQKIATTFLPTAIKFHYIFNLRDFANIFQGILFSSVECVRSSQDLVNLYLHESNRVYRDK 2728

Query:    62 MVDKKDIETFNKMLVENIKKVF 83
             MV++KD++ F+K+ V+ +KK+F
Sbjct:  2729 MVEEKDLDLFDKIQVDVVKKIF 2750

GO:0035085 "cilium axoneme" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

MGI|MGI:1917176 Dnahc17 "dynein, axonemal, heavy chain 17" [Mus musculus (taxid:10090)]

 Score = 284 (105.0 bits), Expect = 7.3e-23, P = 7.3e-23
 Identities = 48/83 (57%), Positives = 69/83 (83%)

Query:     1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
             +H K++ TFLPTA+KFHYI+NLRDL N+FQG+LF++ + +++   LVRLW+HEA RVYGD
Sbjct:  2619 LHQKVSATFLPTAIKFHYIFNLRDLSNIFQGILFSTAEILKTPLDLVRLWLHEAERVYGD 2678

Query:    61 KMVDKKDIETFNKMLVENIKKVF 83
             KMVD+KD ET +++ + ++KK F
Sbjct:  2679 KMVDEKDQETLHRVTIASVKKFF 2701

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016887 "ATPase activity" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

UNIPROTKB|F1N724 DNAH11 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 284 (105.0 bits), Expect = 7.4e-23, P = 7.4e-23
 Identities = 48/82 (58%), Positives = 65/82 (79%)

Query:     2 HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
             H  +A TFLPTA+KFHY++NLRDL NVFQG+LF S +C++  + L+RLW+HE+SRVYGDK
Sbjct:  2697 HQMMAHTFLPTAIKFHYLFNLRDLSNVFQGILFTSPECLKCPNDLIRLWLHESSRVYGDK 2756

Query:    62 MVDKKDIETFNKMLVENIKKVF 83
             ++D KD + F+K L+E   K F
Sbjct:  2757 LIDTKDCDLFHKKLLETANKYF 2778

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

UNIPROTKB|F1LRU2 Dnah17 "Protein Dnah17" [Rattus norvegicus (taxid:10116)]

 Score = 277 (102.6 bits), Expect = 4.0e-22, P = 4.0e-22
 Identities = 49/83 (59%), Positives = 67/83 (80%)

Query:     1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
             +H K+A TFLPTA+KFHYI+NLRDL N+FQG+LF++ + +R+   +VRLW+HEA RVYGD
Sbjct:  2619 LHQKVAATFLPTAIKFHYIFNLRDLSNIFQGILFSTLEILRTPLDIVRLWLHEAERVYGD 2678

Query:    61 KMVDKKDIETFNKMLVENIKKVF 83
             KMVD+KD ET  ++ + + KK F
Sbjct:  2679 KMVDEKDQETLRRVTMASTKKFF 2701

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

UNIPROTKB|F1PDR4 DNAH9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 275 (101.9 bits), Expect = 6.6e-22, P = 6.6e-22
 Identities = 46/82 (56%), Positives = 69/82 (84%)

Query:     2 HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
             H K+A TFLPTA+KFHY++NLRD  N+FQG+LF+S +CV+S+  LV+L++HE++RVY DK
Sbjct:  2659 HQKIATTFLPTAIKFHYVFNLRDFANIFQGILFSSVECVKSTQDLVKLYLHESNRVYRDK 2718

Query:    62 MVDKKDIETFNKMLVENIKKVF 83
             MV++KD + F+K+  E +KK++
Sbjct:  2719 MVEEKDFDLFDKIQTEVVKKIY 2740

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

RGD|2323582 LOC100363013 "mCG140381-like" [Rattus norvegicus (taxid:10116)]

 Score = 271 (100.5 bits), Expect = 6.7e-22, P = 6.7e-22
 Identities = 48/82 (58%), Positives = 66/82 (80%)

Query:     2 HTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDK 61
             H K+A TFLPTA+KFHYI+NLRD  N+FQG+LF+S +CV+S+  LV+L++HE+ RVY DK
Sbjct:   206 HQKIATTFLPTAIKFHYIFNLRDFANIFQGILFSSTECVKSTQDLVKLYLHESDRVYRDK 265

Query:    62 MVDKKDIETFNKMLVENIKKVF 83
             MV++KD   F+K+  E +KK F
Sbjct:   266 MVEEKDFNLFDKLQTEFLKKNF 287

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

UNIPROTKB|F1PN88 DNAH17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 274 (101.5 bits), Expect = 8.3e-22, P = 8.3e-22
 Identities = 48/83 (57%), Positives = 65/83 (78%)

Query:     1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
             +H K+  TFLPTA+KFHY++NLRDL N+FQG+LF++ + +R    LVRLW+HEA RVYGD
Sbjct:  2600 LHQKVTATFLPTAIKFHYVFNLRDLSNIFQGLLFSTTEILRIPLDLVRLWLHEAERVYGD 2659

Query:    61 KMVDKKDIETFNKMLVENIKKVF 83
             KMVD+KD ET  ++ + + KK F
Sbjct:  2660 KMVDQKDQETLRRVTMASTKKFF 2682

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

UNIPROTKB|K7EK91 DNAH17 "Dynein heavy chain 17, axonemal" [Homo sapiens (taxid:9606)]

 Score = 274 (101.5 bits), Expect = 8.3e-22, P = 8.3e-22
 Identities = 46/83 (55%), Positives = 66/83 (79%)

Query:     1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
             +H K+  TFLPTA+KFHY++NLRDL N+FQG+LF++ + +++   LVRLW+HE  RVYGD
Sbjct:  2630 LHQKITATFLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVLKTPLDLVRLWLHETERVYGD 2689

Query:    61 KMVDKKDIETFNKMLVENIKKVF 83
             KMVD+KD ET +++ + + KK F
Sbjct:  2690 KMVDEKDQETLHRVTMASTKKFF 2712

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

UNIPROTKB|Q9UFH2 DNAH17 "Dynein heavy chain 17, axonemal" [Homo sapiens (taxid:9606)]

 Score = 274 (101.5 bits), Expect = 8.4e-22, P = 8.4e-22
 Identities = 46/83 (55%), Positives = 66/83 (79%)

Query:     1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGD 60
             +H K+  TFLPTA+KFHY++NLRDL N+FQG+LF++ + +++   LVRLW+HE  RVYGD
Sbjct:  2621 LHQKITATFLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVLKTPLDLVRLWLHETERVYGD 2680

Query:    61 KMVDKKDIETFNKMLVENIKKVF 83
             KMVD+KD ET +++ + + KK F
Sbjct:  2681 KMVDEKDQETLHRVTMASTKKFF 2703

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=NAS

GO:0005858 "axonemal dynein complex" evidence=NAS

GO:0003777 "microtubule motor activity" evidence=NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UFH2	DYH17_HUMAN	No assigned EC number	0.5542	0.9764	0.0185	yes	N/A
Q69Z23	DYH17_MOUSE	No assigned EC number	0.5783	0.9764	0.0185	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
pfam12775	272	pfam12775, AAA_7, P-loop containing dynein motor r	1e-23

>gnl|CDD|193251 pfam12775, AAA_7, P-loop containing dynein motor region D3

 Score = 90.0 bits (223), Expect = 1e-23
 Identities = 33/53 (62%), Positives = 46/53 (86%)

Query: 1   MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHE 53
           +H K+A TFLPTA+KFHY++NLRDL N+FQG+LF+S +C++S   L+RLW+HE
Sbjct: 220 LHQKIATTFLPTAIKFHYVFNLRDLSNIFQGLLFSSVECLKSPWDLIRLWLHE 272

the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This particular family is the D3 and is an ATP binding site. Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
PF12775	272	AAA_7: P-loop containing dynein motor region D3; P	99.81
KOG3595|consensus	1395		99.8
COG5245	3164	DYN1 Dynein, heavy chain [Cytoskeleton]	99.32

>PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A

Probab=99.81  E-value=3.9e-21  Score=135.91  Aligned_cols=53  Identities=51%  Similarity=0.936  Sum_probs=49.6

Q ss_pred             ChHHHHhhhCCCCCcceeeeecchhHHHhhhhhcccccccCChHHHHHHHHHh
Q psy2656           1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHE   53 (85)
Q Consensus         1 ~y~~v~~~~~ptp~k~HY~FnlRdl~~i~qgl~~~~~~~~~~~~~l~rlw~hE   53 (85)
                      +|++++++|+|||.|+||+||||||+||+|||+++.++.+.++.+++|||.||
T Consensus       220 ly~~i~~~~~ptp~k~HY~FnlRDlsrv~qGil~~~~~~~~~~~~l~rLW~HE  272 (272)
T PF12775_consen  220 LYQKIRQQFLPTPSKPHYTFNLRDLSRVFQGILLASPESIKTKESLLRLWVHE  272 (272)
T ss_dssp             HHHHHHHHS-TTTTCTTTTSHHHHHHHHHHHHHHHHCTSSS-SHHHHHHHHHH
T ss_pred             HHHhhhcccCCCCccceeeccHHHHHHHHHHHHhcChhhcCCHHHheEeecCC
Confidence            58999999999999999999999999999999999999999999999999999

>KOG3595|consensus

Probab=99.80  E-value=4.2e-20  Score=151.79  Aligned_cols=84  Identities=44%  Similarity=0.793  Sum_probs=79.7

Q ss_pred             ChHHHHhhhCCCCCcceeeeecchhHHHhhhhhcccccccCChHHHHHHHHHhhhhHHhccCCCHHHHHHHHHHHHHHHH
Q psy2656           1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENIK   80 (85)
Q Consensus         1 ~y~~v~~~~~ptp~k~HY~FnlRdl~~i~qgl~~~~~~~~~~~~~l~rlw~hE~~Rvf~DRLi~~~d~~~f~~~l~~~~~   80 (85)
                      +|..++.+|+|||+++||+|||||++||++|+..+.+....+...++++|.||+.|||.|||++++|++||++.+.+.+.
T Consensus       310 ~~~~~~~~~~~t~~~~hyv~~lrd~~r~~~~i~~~~~~~~~~~~~l~~~~~~e~~rv~~drlv~~~~~~~~~~~~~~~~~  389 (1395)
T KOG3595|consen  310 FYPKVQENFLPTPSKSHYVFNLRDLSRVVQGILLAVSEALLTLEDLIRLWVHEAIRVFADRLVDDEDRQWFDKKLQEVLL  389 (1395)
T ss_pred             HHHHHHHhcCCCCCcceeeechhhhhhheeehcccCcHhhccHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999977888899999999999999999999999999999999999998


Q ss_pred             cccC
Q psy2656          81 KVFA   84 (85)
Q Consensus        81 ~~f~   84 (85)
                      +.|+
T Consensus       390 ~~~~  393 (1395)
T KOG3595|consen  390 KLFE  393 (1395)
T ss_pred             HHhh
Confidence            8775

>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton]

Probab=99.32  E-value=7.9e-13  Score=109.53  Aligned_cols=83  Identities=16%  Similarity=0.185  Sum_probs=71.4

Q ss_pred             ChHHHHhhhCCCCCcceeeeecchhHHHhhhhhcccccccC-ChHHHHHHHHHhhhhHHhccCCCHHHHHHHHHHHHHHH
Q psy2656           1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVR-SSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENI   79 (85)
Q Consensus         1 ~y~~v~~~~~ptp~k~HY~FnlRdl~~i~qgl~~~~~~~~~-~~~~l~rlw~hE~~Rvf~DRLi~~~d~~~f~~~l~~~~   79 (85)
                      +|+..++++. +--+.||.|+||||+||+.|+..+...... +..+++++|+||++|++.|||+.+++..|+.+.+.+..
T Consensus      1682 ly~~~k~~~k-~~lq~~y~y~pReLtR~lr~i~~yaeT~~~t~~~slI~~wy~ea~r~~~dRLV~qkE~st~~q~ly~~~ 1760 (3164)
T COG5245        1682 LYLSSKDKTK-FFLQMNYGYKPRELTRSLRAIFGYAETRIDTPDVSLIIDWYCEAIREKIDRLVQQKESSTSRQDLYDFG 1760 (3164)
T ss_pred             HHHHHHHhhh-hhcccccccChHHHHHHHHHHHhHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            4777777776 566899999999999999999987654443 34689999999999999999999999999999999998


Q ss_pred             HcccC
Q psy2656          80 KKVFA   84 (85)
Q Consensus        80 ~~~f~   84 (85)
                      .++|+
T Consensus      1761 ~~~~~ 1765 (3164)
T COG5245        1761 LRAIR 1765 (3164)
T ss_pred             HHhhh
Confidence            87764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	85
4ai6_A	2695	Dynein Motor Domain - Adp Complex Length = 2695		2e-06
3qmz_A	2486	Crystal Structure Of The Cytoplasmic Dynein Heavy C		2e-06

>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 12   TAVKFHYIWNLRDLDNVFQGMLFASGDCVRSS-SQLVRLWMHEASRVYGDKMVDKKDIET 70
            T ++ HY+++ R+L  + +G+  A     R +   L+RLW +EA R++ D++V  K+  +
Sbjct: 1465 TGLQSHYLFSPRELTRLVRGVYTAINTGPRQTLRSLIRLWAYEAWRIFADRLVGVKEKNS 1524
Query: 71   FNKMLVENIKK 81
            F ++L E + K
Sbjct: 1525 FEQLLYETVDK 1535

>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 12   TAVKFHYIWNLRDLDNVFQGMLFASGDCVRSS-SQLVRLWMHEASRVYGDKMVDKKDIET 70
            T ++ HY+++ R+L  + +G+  A     R +   L+RLW +EA R++ D++V  K+  +
Sbjct: 1246 TGLQSHYLFSPRELTRLVRGVYTAINTGPRQTLRSLIRLWAYEAWRIFADRLVGVKEKNS 1305
Query: 71   FNKMLVENIKK 81
            F ++L E + K
Sbjct: 1306 FEQLLYETVDK 1316

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	1e-27
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	2e-25

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score =  102 bits (257), Expect = 1e-27
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 4    KLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSS-SQLVRLWMHEASRVYGDKM 62
               +    T ++ HY+++ R+L  + +G+  A     R +   L+RLW +EA R++ D++
Sbjct: 1457 NECKARYSTGLQSHYLFSPRELTRLVRGVYTAINTGPRQTLRSLIRLWAYEAWRIFADRL 1516

Query: 63   VDKKDIETFNKMLVENIKKVF 83
            V  K+  +F ++L E + K  
Sbjct: 1517 VGVKEKNSFEQLLYETVDKYL 1537

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 96.5 bits (240), Expect = 2e-25
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 1    MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGDCVRSSS-QLVRLWMHEASRVYG 59
             +++  + F P   + HYI++ R+L    + +L A       +   LVRLW HEA R++ 
Sbjct: 1493 FYSESQKRFTPDI-QAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQ 1551

Query: 60   DKMVDKKDIETFNKMLVENIKKVF 83
            D++V+ ++ E  +K + E   K F
Sbjct: 1552 DRLVETEEKEWTDKKIDEVALKHF 1575

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	99.92
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	99.92

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*

Probab=99.92  E-value=4.8e-26  Score=193.90  Aligned_cols=83  Identities=30%  Similarity=0.446  Sum_probs=76.5

Q ss_pred             ChHHHHhhhCCCCCcceeeeecchhHHHhhhhhccc-ccccCChHHHHHHHHHhhhhHHhccCCCHHHHHHHHHHHHHHH
Q psy2656           1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFAS-GDCVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENI   79 (85)
Q Consensus         1 ~y~~v~~~~~ptp~k~HY~FnlRdl~~i~qgl~~~~-~~~~~~~~~l~rlw~hE~~Rvf~DRLi~~~d~~~f~~~l~~~~   79 (85)
                      +|++++++|+|+ .|+||+||||||+||+|||+++. +....++.+++|||+|||.|||+||||+++|++||.+++.+++
T Consensus      1493 ly~~v~~~~lp~-~k~HY~FnLRDLsrv~qGll~~~~~~~~~~~~~lvrLW~HE~~RVF~DRLv~~~Dr~~f~~~l~~~~ 1571 (3245)
T 3vkg_A         1493 FYSESQKRFTPD-IQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVA 1571 (3245)
T ss_dssp             HHHHHHHHSCTT-TSTTCCCCHHHHHHHHHHHHHHHHTSSCCCTTHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCC-cCCCccccHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence            488999999996 89999999999999999999973 4455678899999999999999999999999999999999999


Q ss_pred             HcccC
Q psy2656          80 KKVFA   84 (85)
Q Consensus        80 ~~~f~   84 (85)
                      +++|+
T Consensus      1572 ~~~F~ 1576 (3245)
T 3vkg_A         1572 LKHFP 1576 (3245)
T ss_dssp             HHHCT
T ss_pred             HHhcC
Confidence            99985

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A

Probab=99.92  E-value=1e-25  Score=190.47  Aligned_cols=83  Identities=24%  Similarity=0.514  Sum_probs=76.9

Q ss_pred             ChHHHHhhhCCCCCcceeeeecchhHHHhhhhhccccc-ccCChHHHHHHHHHhhhhHHhccCCCHHHHHHHHHHHHHHH
Q psy2656           1 MHTKLAQTFLPTAVKFHYIWNLRDLDNVFQGMLFASGD-CVRSSSQLVRLWMHEASRVYGDKMVDKKDIETFNKMLVENI   79 (85)
Q Consensus         1 ~y~~v~~~~~ptp~k~HY~FnlRdl~~i~qgl~~~~~~-~~~~~~~l~rlw~hE~~Rvf~DRLi~~~d~~~f~~~l~~~~   79 (85)
                      +|++++++|+|+ .|+||+||||||+||+|||+++.++ .+.++.+++|||+|||.|||+|||++++|++||.+++.+++
T Consensus      1455 ~y~~v~~~~~~~-~k~HY~FnlRDLsrv~qGll~~~~~~~~~~~~~l~rLw~HE~~Rvf~DRLv~~~D~~~f~~~l~~~~ 1533 (2695)
T 4akg_A         1455 LYNECKARYSTG-LQSHYLFSPRELTRLVRGVYTAINTGPRQTLRSLIRLWAYEAWRIFADRLVGVKEKNSFEQLLYETV 1533 (2695)
T ss_dssp             HHHHHHHHSCTT-TCTTCCCCHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTTTCCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCc-cCCCcccCHHHHHHHHHHHHhcCchhhhccHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            488999999875 8999999999999999999998554 57889999999999999999999999999999999999999


Q ss_pred             HcccC
Q psy2656          80 KKVFA   84 (85)
Q Consensus        80 ~~~f~   84 (85)
                      +++|+
T Consensus      1534 ~~~f~ 1538 (2695)
T 4akg_A         1534 DKYLP 1538 (2695)
T ss_dssp             HHHSC
T ss_pred             HHHhc
Confidence            99985

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00