Psyllid ID: psy2717

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
ccccccEEEEEcccccccccccccccccHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHccccccccEEEcccccEEEEcccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHccEEEcccccccccHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHccccccccccccHHHHccccccccccccc
cccccHcHEEcccEEEEEEEccEEcHHHcEEEcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHccccccEEEEcccccEEEEccHHHHcHHHHccHHHHccccccHHHHHHHHHHcccHHHHHHHHHcEEEEcHHHccccHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHcHHHHHccEEHHHHHHHcHHHHHHHcc
MATRKLSTVSLHnkysnpygngyalPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLeksyelpdgqvitignerfrcpealfqpsflgmescgihETVYNSIMKCDVDIRKDLYANtvlsggttmypgIADRMQKEITAlapstikikiiapperkysvWIGGSILASLSTFQQMWISKqeydesgpgivhrkcf
MATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILtergysftttaeREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKqeydesgpgivhrkcf
MATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
************NKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAA***LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK****************
*ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ***************ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
********VSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
*****LSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query229 2.2.26 [Sep-21-2011]
P18600376 Actin, clone 205 OS=Artem N/A N/A 0.938 0.571 0.962 1e-121
P18601376 Actin, clone 211 OS=Artem N/A N/A 0.938 0.571 0.967 1e-121
P49871376 Actin, muscle OS=Manduca N/A N/A 0.938 0.571 0.962 1e-121
P07836376 Actin, muscle-type A1 OS= N/A N/A 0.938 0.571 0.962 1e-121
P83968376 Actin, indirect flight mu N/A N/A 0.938 0.571 0.962 1e-121
P83967376 Actin, indirect flight mu yes N/A 0.938 0.571 0.962 1e-121
P83969376 Actin, indirect flight mu N/A N/A 0.938 0.571 0.962 1e-121
P07837376 Actin, muscle-type A2 OS= N/A N/A 0.938 0.571 0.967 1e-121
P10981376 Actin-87E OS=Drosophila m yes N/A 0.938 0.571 0.958 1e-120
P49128376 Actin-1 OS=Aedes aegypti N/A N/A 0.938 0.571 0.958 1e-120
>sp|P18600|ACT1_ARTSX Actin, clone 205 OS=Artemia sp. PE=2 SV=1 Back     alignment and function desciption
 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/215 (96%), Positives = 211/215 (98%)

Query: 15  YSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 74
           ++ P   GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221

Query: 75  LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 134
           LDFEQEMATAAASTSLEKSYELPDGQV+TIGNERFRCPEALFQPSFLGMESCGIHETVYN
Sbjct: 222 LDFEQEMATAAASTSLEKSYELPDGQVLTIGNERFRCPEALFQPSFLGMESCGIHETVYN 281

Query: 135 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 194
           +IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW
Sbjct: 282 TIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 341

Query: 195 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229
           IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.
Artemia sp. (taxid: 6662)
>sp|P18601|ACT2_ARTSX Actin, clone 211 OS=Artemia sp. PE=2 SV=1 Back     alignment and function description
>sp|P49871|ACT_MANSE Actin, muscle OS=Manduca sexta PE=2 SV=1 Back     alignment and function description
>sp|P07836|ACT1_BOMMO Actin, muscle-type A1 OS=Bombyx mori PE=3 SV=1 Back     alignment and function description
>sp|P83968|ACT6_DROSI Actin, indirect flight muscle OS=Drosophila simulans GN=Act88F PE=3 SV=1 Back     alignment and function description
>sp|P83967|ACT6_DROME Actin, indirect flight muscle OS=Drosophila melanogaster GN=Act88F PE=1 SV=1 Back     alignment and function description
>sp|P83969|ACT1_BACDO Actin, indirect flight muscle OS=Bactrocera dorsalis PE=3 SV=1 Back     alignment and function description
>sp|P07837|ACT2_BOMMO Actin, muscle-type A2 OS=Bombyx mori PE=3 SV=1 Back     alignment and function description
>sp|P10981|ACT5_DROME Actin-87E OS=Drosophila melanogaster GN=Act87E PE=1 SV=1 Back     alignment and function description
>sp|P49128|ACT1_AEDAE Actin-1 OS=Aedes aegypti GN=ACT-1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query229
124487964294 putative actin [Maconellicoccus hirsutus 0.938 0.731 0.972 1e-120
328790806 335 PREDICTED: actin, clone 205-like isoform 0.938 0.641 0.972 1e-120
383861252 333 PREDICTED: actin, muscle-like isoform 2 0.938 0.645 0.972 1e-120
380025506 372 PREDICTED: actin, indirect flight muscle 0.938 0.577 0.967 1e-120
110456520218 putative actin, partial [Diaphorina citr 0.938 0.986 0.972 1e-120
91078488 341 PREDICTED: similar to Actin-87E isoform 0.938 0.630 0.972 1e-120
163883731 376 actin 1 [Nilaparvata lugens] gi|16388373 0.938 0.571 0.972 1e-120
332373032 376 unknown [Dendroctonus ponderosae] 0.938 0.571 0.972 1e-120
91078486 376 PREDICTED: similar to Actin-87E isoform 0.938 0.571 0.972 1e-120
328790804 376 PREDICTED: actin, clone 205-like [Apis m 0.938 0.571 0.972 1e-120
>gi|124487964|gb|ABN12065.1| putative actin [Maconellicoccus hirsutus] Back     alignment and taxonomy information
 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/215 (97%), Positives = 211/215 (98%)

Query: 15  YSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 74
           ++ P   GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 80  HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 139

Query: 75  LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 134
           LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN
Sbjct: 140 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 199

Query: 135 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 194
           SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW
Sbjct: 200 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 259

Query: 195 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229
           IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 260 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 294

Source: Maconellicoccus hirsutus

Species: Maconellicoccus hirsutus

Genus: Maconellicoccus

Family: Pseudococcidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328790806|ref|XP_623487.2| PREDICTED: actin, clone 205-like isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|383861252|ref|XP_003706100.1| PREDICTED: actin, muscle-like isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|380025506|ref|XP_003696514.1| PREDICTED: actin, indirect flight muscle-like isoform 2 [Apis florea] Back     alignment and taxonomy information
>gi|110456520|gb|ABG74719.1| putative actin, partial [Diaphorina citri] Back     alignment and taxonomy information
>gi|91078488|ref|XP_975870.1| PREDICTED: similar to Actin-87E isoform 2 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|163883731|gb|ABY48093.1| actin 1 [Nilaparvata lugens] gi|163883734|gb|ABY48094.1| actin 1 variant 1 [Nilaparvata lugens] gi|163883736|gb|ABY48095.1| actin 1 variant 2 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|332373032|gb|AEE61657.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|91078486|ref|XP_966495.1| PREDICTED: similar to Actin-87E isoform 1 [Tribolium castaneum] gi|55783600|gb|AAV65298.1| actin [Apriona germari] gi|270004020|gb|EFA00468.1| hypothetical protein TcasGA2_TC003326 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328790804|ref|XP_003251465.1| PREDICTED: actin, clone 205-like [Apis mellifera] gi|383861246|ref|XP_003706097.1| PREDICTED: actin, clone 205-like [Megachile rotundata] gi|383861248|ref|XP_003706098.1| PREDICTED: actin, clone 205-like [Megachile rotundata] gi|332024633|gb|EGI64830.1| Actin, clone 205 [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query229
FB|FBgn0000047376 Act88F "Actin 88F" [Drosophila 0.925 0.563 0.976 1.5e-108
FB|FBgn0000046376 Act87E "Actin 87E" [Drosophila 0.925 0.563 0.971 3e-108
ZFIN|ZDB-GENE-051030-60376 zgc:123289 "zgc:123289" [Danio 0.925 0.563 0.966 1e-107
FB|FBgn0000044376 Act57B "Actin 57B" [Drosophila 0.925 0.563 0.962 1.3e-107
FB|FBgn0000045376 Act79B "Actin 79B" [Drosophila 0.925 0.563 0.971 3.5e-107
FB|FBgn0000042376 Act5C "Actin 5C" [Drosophila m 0.925 0.563 0.957 5.7e-107
UNIPROTKB|P60706375 ACTB "Actin, cytoplasmic 1" [G 0.925 0.565 0.957 7.2e-107
UNIPROTKB|Q5ZMQ2375 ACTG1 "Actin, cytoplasmic 2" [ 0.925 0.565 0.957 7.2e-107
UNIPROTKB|P60712375 ACTB "Actin, cytoplasmic 1" [B 0.925 0.565 0.957 7.2e-107
UNIPROTKB|P63258375 ACTG1 "Actin, cytoplasmic 2" [ 0.925 0.565 0.957 7.2e-107
FB|FBgn0000047 Act88F "Actin 88F" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
 Identities = 207/212 (97%), Positives = 209/212 (98%)

Query:    18 PYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 77
             P   G+ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct:   165 PIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224

Query:    78 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 137
             EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM
Sbjct:   225 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 284

Query:   138 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGG 197
             KCDVDIRKDLYAN+VLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGG
Sbjct:   285 KCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGG 344

Query:   198 SILASLSTFQQMWISKQEYDESGPGIVHRKCF 229
             SILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct:   345 SILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
GO:0005200 "structural constituent of cytoskeleton" evidence=ISS
GO:0005884 "actin filament" evidence=ISS
GO:0007010 "cytoskeleton organization" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0014866 "skeletal myofibril assembly" evidence=IMP
GO:0006911 "phagocytosis, engulfment" evidence=IMP
FB|FBgn0000046 Act87E "Actin 87E" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-051030-60 zgc:123289 "zgc:123289" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0000044 Act57B "Actin 57B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0000045 Act79B "Actin 79B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0000042 Act5C "Actin 5C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P60706 ACTB "Actin, cytoplasmic 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMQ2 ACTG1 "Actin, cytoplasmic 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P60712 ACTB "Actin, cytoplasmic 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P63258 ACTG1 "Actin, cytoplasmic 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P84183ACT4_BOMMONo assigned EC number0.94410.93880.5718N/AN/A
Q711N9ACTB_MESAUNo assigned EC number0.94410.93880.5733N/AN/A
Q6NVA9ACTB_XENTRNo assigned EC number0.94880.93880.5733yesN/A
P84185ACT5C_ANOGANo assigned EC number0.94410.93880.5718yesN/A
O93400ACTB_XENLANo assigned EC number0.94880.93880.5733N/AN/A
P84336ACTB_CAMDRNo assigned EC number0.94410.93880.5733N/AN/A
Q8JJB8ACTG_TRISCNo assigned EC number0.94410.93880.5733N/AN/A
A2BDB0ACTG_XENLANo assigned EC number0.94410.93880.5733N/AN/A
Q5R1X3ACTB_PANTRNo assigned EC number0.94410.93880.5733yesN/A
P49128ACT1_AEDAENo assigned EC number0.95810.93880.5718N/AN/A
Q5R6G0ACTB_PONABNo assigned EC number0.94410.93880.5733yesN/A
P18601ACT2_ARTSXNo assigned EC number0.96740.93880.5718N/AN/A
P18600ACT1_ARTSXNo assigned EC number0.96270.93880.5718N/AN/A
P18603ACT4_ARTSXNo assigned EC number0.95340.93880.5718N/AN/A
P63256ACTG_ANSANNo assigned EC number0.94410.93880.5733N/AN/A
P63257ACTG_TRIVUNo assigned EC number0.94410.93880.5733N/AN/A
P02574ACT4_DROMENo assigned EC number0.95810.93880.5718yesN/A
P53505ACT5_XENLANo assigned EC number0.94410.93880.5718N/AN/A
P63258ACTG_BOVINNo assigned EC number0.94410.93880.5733yesN/A
P63259ACTG_RATNo assigned EC number0.94410.93880.5733yesN/A
P53501ACT3_DROMENo assigned EC number0.94880.93880.5718yesN/A
P49871ACT_MANSENo assigned EC number0.96270.93880.5718N/AN/A
P45887ACT5_BACDONo assigned EC number0.95810.93880.5718N/AN/A
P45886ACT3_BACDONo assigned EC number0.95340.93880.5718N/AN/A
P60709ACTB_HUMANNo assigned EC number0.94410.93880.5733yesN/A
P60708ACTB_HORSENo assigned EC number0.94410.93880.5733yesN/A
P60707ACTB_TRIVUNo assigned EC number0.94410.93880.5733N/AN/A
P60706ACTB_CHICKNo assigned EC number0.94410.93880.5733yesN/A
Q5ZMQ2ACTG_CHICKNo assigned EC number0.94410.93880.5733yesN/A
Q5JAK2ACTG_RANLENo assigned EC number0.94410.93880.5733N/AN/A
P29751ACTB_RABITNo assigned EC number0.94410.93880.5733yesN/A
Q6P378ACTG_XENTRNo assigned EC number0.94410.93880.5733yesN/A
Q4L0Y2ACTB_SPECINo assigned EC number0.94410.93880.5733N/AN/A
P07836ACT1_BOMMONo assigned EC number0.96270.93880.5718N/AN/A
P07837ACT2_BOMMONo assigned EC number0.96740.93880.5718N/AN/A
P83968ACT6_DROSINo assigned EC number0.96270.93880.5718N/AN/A
P83969ACT1_BACDONo assigned EC number0.96270.93880.5718N/AN/A
P83967ACT6_DROMENo assigned EC number0.96270.93880.5718yesN/A
P60710ACTB_MOUSENo assigned EC number0.94410.93880.5733yesN/A
P60711ACTB_RATNo assigned EC number0.94410.93880.5733yesN/A
P60712ACTB_BOVINNo assigned EC number0.94410.93880.5733yesN/A
P60713ACTB_SHEEPNo assigned EC number0.94410.93880.5733N/AN/A
Q4R561ACTB_MACFANo assigned EC number0.94410.93880.5733N/AN/A
O18840ACTB_CANFANo assigned EC number0.94410.93880.5733yesN/A
Q6QAQ1ACTB_PIGNo assigned EC number0.94410.93880.5733yesN/A
P63261ACTG_HUMANNo assigned EC number0.94410.93880.5733yesN/A
P63260ACTG_MOUSENo assigned EC number0.94410.93880.5733yesN/A
Q71FK5ACTB_CAVPONo assigned EC number0.94410.93880.5733yesN/A
Q76N69ACTB_CHLAENo assigned EC number0.94410.93880.5733N/AN/A
P10981ACT5_DROMENo assigned EC number0.95810.93880.5718yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
PTZ00281376 PTZ00281, PTZ00281, actin; Provisional 1e-149
pfam00022367 pfam00022, Actin, Actin 1e-128
PTZ00004378 PTZ00004, PTZ00004, actin-2; Provisional 1e-128
smart00268373 smart00268, ACTIN, Actin 1e-123
PTZ00466380 PTZ00466, PTZ00466, actin-like protein; Provisiona 6e-85
PTZ00452375 PTZ00452, PTZ00452, actin; Provisional 8e-85
COG5277444 COG5277, COG5277, Actin and related proteins [Cyto 6e-75
PTZ00280414 PTZ00280, PTZ00280, Actin-related protein 3; Provi 3e-46
>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional Back     alignment and domain information 
 Score =  419 bits (1078), Expect = e-149
 Identities = 192/215 (89%), Positives = 202/215 (93%)

Query: 15  YSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 74
           ++ P   GYALPHAILRLDLAGRDLTDY+MKILTERGYSFTTTAEREIVRDIKEKL YVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVA 221

Query: 75  LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 134
           LDFE EM TAA+S++LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES GIHET YN
Sbjct: 222 LDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYN 281

Query: 135 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 194
           SIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KE+TALAPST+KIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVW 341

Query: 195 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229
           IGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 376

Length = 376
>gnl|CDD|200935 pfam00022, Actin, Actin Back     alignment and domain information
>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional Back     alignment and domain information
>gnl|CDD|214592 smart00268, ACTIN, Actin Back     alignment and domain information
>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional Back     alignment and domain information
>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 229
PTZ00452375 actin; Provisional 100.0
KOG0676|consensus372 100.0
PTZ00466380 actin-like protein; Provisional 100.0
PTZ00281376 actin; Provisional 100.0
PTZ00004378 actin-2; Provisional 100.0
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 100.0
PTZ00280414 Actin-related protein 3; Provisional 100.0
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 100.0
KOG0679|consensus426 100.0
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 100.0
KOG0677|consensus389 100.0
KOG0680|consensus400 100.0
COG5277444 Actin and related proteins [Cytoskeleton] 100.0
KOG0678|consensus415 100.0
KOG0681|consensus645 100.0
KOG0797|consensus618 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 99.87
PRK13930335 rod shape-determining protein MreB; Provisional 99.87
PRK13929335 rod-share determining protein MreBH; Provisional 99.86
PRK13927334 rod shape-determining protein MreB; Provisional 99.84
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 99.82
PRK13928336 rod shape-determining protein Mbl; Provisional 99.78
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.63
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.33
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.27
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.25
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.21
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.06
CHL00094 621 dnaK heat shock protein 70 98.88
PRK01433 595 hscA chaperone protein HscA; Provisional 98.87
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 98.85
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 98.84
PTZ00400 663 DnaK-type molecular chaperone; Provisional 98.83
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 98.82
PLN03184 673 chloroplast Hsp70; Provisional 98.81
TIGR01991 599 HscA Fe-S protein assembly chaperone HscA. The Hea 98.81
PRK05183 616 hscA chaperone protein HscA; Provisional 98.74
PRK13411 653 molecular chaperone DnaK; Provisional 98.74
PTZ00009 653 heat shock 70 kDa protein; Provisional 98.68
PRK13410 668 molecular chaperone DnaK; Provisional 98.68
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 98.63
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 98.56
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 98.56
PRK13917344 plasmid segregation protein ParM; Provisional 98.41
PRK11678450 putative chaperone; Provisional 98.38
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.09
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 98.03
COG0443 579 DnaK Molecular chaperone [Posttranslational modifi 97.75
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 97.72
COG4820277 EutJ Ethanolamine utilization protein, possible ch 97.58
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 97.29
KOG0100|consensus 663 96.63
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 96.15
KOG0101|consensus 620 96.14
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 95.84
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 95.5
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 95.3
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 95.27
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 95.07
PRK10719475 eutA reactivating factor for ethanolamine ammonia 94.9
PRK13317277 pantothenate kinase; Provisional 94.81
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 93.45
KOG0104|consensus 902 91.96
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 91.72
KOG0103|consensus 727 91.53
TIGR03123318 one_C_unchar_1 probable H4MPT-linked C1 transfer p 89.08
PRK11031 496 guanosine pentaphosphate phosphohydrolase; Provisi 88.88
KOG0102|consensus 640 88.66
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 87.84
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 87.37
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 86.53
COG1548330 Predicted transcriptional regulator/sugar kinase [ 86.18
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 83.54
PRK10854 513 exopolyphosphatase; Provisional 82.7
COG0248 492 GppA Exopolyphosphatase [Nucleotide transport and 80.25
>PTZ00452 actin; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-66  Score=441.78  Aligned_cols=228  Identities=50%  Similarity=0.900  Sum_probs=215.1

Q ss_pred             cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717           2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM   81 (229)
Q Consensus         2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~   81 (229)
                      +||+|||+|++.|+|+||+||+++++++.++++||+++|++|+++|.++++++....+.+++++|||++|||+.++.+++
T Consensus       148 ~tglVVDiG~~~t~v~PV~dG~~l~~~~~r~~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~  227 (375)
T PTZ00452        148 TIGLVVDSGEGVTHCVPVFEGHQIPQAITKINLAGRLCTDYLTQILQELGYSLTEPHQRIIVKNIKERLCYTALDPQDEK  227 (375)
T ss_pred             ceeeeecCCCCcceEEEEECCEEeccceEEeeccchHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCcHHHHH
Confidence            69999999999999999999999999999999999999999999999988888777788899999999999999988776


Q ss_pred             HHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCcc
Q psy2717          82 ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYP  161 (229)
Q Consensus        82 ~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~  161 (229)
                      ..........+.|+||||+.|.++.|||.+||+||+|++++.+..||+++|.++|.+||+|+|++|++||+|+||+|++|
T Consensus       228 ~~~~~~~~~~~~y~LPDg~~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~  307 (375)
T PTZ00452        228 RIYKESNSQDSPYKLPDGNILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFP  307 (375)
T ss_pred             HHhhccCCcCceEECCCCCEEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEeccccccc
Confidence            54333334467899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcccccccccccHHHHhhcCccchhhccC
Q psy2717         162 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF  229 (229)
Q Consensus       162 Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~Itr~ey~e~G~~~~~~k~~  229 (229)
                      ||.+||++||+.+.|...+++|.++++|++++|+||||+|++++|+++||||+||+|+|+++++||||
T Consensus       308 Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~vtk~eYeE~G~~i~~~k~~  375 (375)
T PTZ00452        308 GIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGPSIVHRKCF  375 (375)
T ss_pred             CHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcCccchhhhEeEHHHHhccCcceeeeecC
Confidence            99999999999999988899999999999999999999999999999999999999999999999997

>KOG0676|consensus Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>KOG0679|consensus Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>KOG0677|consensus Back     alignment and domain information
>KOG0680|consensus Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>KOG0678|consensus Back     alignment and domain information
>KOG0681|consensus Back     alignment and domain information
>KOG0797|consensus Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>KOG0100|consensus Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>KOG0101|consensus Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>KOG0104|consensus Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>KOG0103|consensus Back     alignment and domain information
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>KOG0102|consensus Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
3u4l_A375 Cryocooled Bovine Profilin:actin Crystal Structure 1e-120
2btf_A375 The Structure Of Crystalline Profilin-Beta-Actin Le 1e-120
3byh_A374 Model Of Actin-Fimbrin Abd2 Complex Length = 374 1e-120
2oan_A375 Structure Of Oxidized Beta-Actin Length = 375 1e-119
2hf3_A374 Crystal Structure Of Monomeric Actin In The Adp Bou 1e-119
1d4x_A375 Crystal Structure Of Caenorhabditis Elegans Mg-Atp 1e-119
3eks_A375 Crystal Structure Of Monomeric Actin Bound To Cytoc 1e-119
3b63_L365 Actin Filament Model In The Extended Form Of Acroms 1e-116
3w3d_A374 Crystal Structure Of Smooth Muscle G Actin Dnase I 1e-116
3mn5_A359 Structures Of Actin-Bound Wh2 Domains Of Spire And 1e-116
1t44_A370 Structural Basis Of Actin Sequestration By Thymosin 1e-116
2gwj_A371 Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form 1e-116
1kxp_A375 Crystal Structure Of Human Vitamin D-binding Protei 1e-116
1lcu_A371 Polylysine Induces An Antiparallel Actin Dimer That 1e-116
3g37_O376 Cryo-Em Structure Of Actin Filament In The Presence 1e-116
1qz5_A375 Structure Of Rabbit Actin In Complex With Kabiramid 1e-116
1eqy_A377 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 1e-116
4b1v_A376 Structure Of The Phactr1 Rpel-N Domain Bound To G-A 1e-116
1ijj_A377 The X-Ray Crystal Structure Of The Complex Between 1e-115
4efh_A375 Acanthamoeba Actin Complex With Spir Domain D Lengt 1e-115
1nlv_A375 Crystal Structure Of Dictyostelium Discoideum Actin 1e-115
3ci5_A375 Complex Of Phosphorylated Dictyostelium Discoideum 1e-114
3chw_A375 Complex Of Dictyostelium Discoideum Actin With Prof 1e-114
1c0f_A368 Crystal Structure Of Dictyostelium Caatp-Actin In C 1e-114
2w49_D372 Isometrically Contracting Insect Asynchronous Fligh 1e-113
1atn_A373 Atomic Structure Of The Actin:dnase I Complex Lengt 1e-113
3m6g_A371 Crystal Structure Of Actin In Complex With Lobophor 1e-113
1c0g_A375 Crystal Structure Of 1:1 Complex Between Gelsolin S 1e-112
3a5m_C375 Crystal Structure Of A Dictyostelium P109i Mg2+-Act 1e-112
3a5l_C375 Crystal Structure Of A Dictyostelium P109a Mg2+-Act 1e-112
3b63_B364 Actin Filament Model In The Extended Form Of Acroms 1e-112
3b63_E365 Actin Filament Model In The Extended Form Of Acroms 1e-112
1dej_A375 Crystal Structure Of A DictyosteliumTETRAHYMENA CHI 1e-112
3b63_D357 Actin Filament Model In The Extended Form Of Acroms 1e-109
1yvn_A375 The Yeast Actin Val 159 Asn Mutant Complex With Hum 1e-108
1yag_A375 Structure Of The Yeast Actin-human Gelsolin Segment 1e-108
3b63_F357 Actin Filament Model In The Extended Form Of Acroms 1e-108
3b63_A365 Actin Filament Model In The Extended Form Of Acroms 1e-105
3b63_C365 Actin Filament Model In The Extended Form Of Acroms 1e-104
1k8k_B394 Crystal Structure Of Arp23 COMPLEX Length = 394 1e-53
2p9k_B394 Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta 1e-53
1k8k_A418 Crystal Structure Of Arp23 COMPLEX Length = 418 8e-26
3dwl_A427 Crystal Structure Of Fission Yeast Arp2/3 Complex L 3e-22
3qb0_A498 Crystal Structure Of Actin-Related Protein Arp4 Fro 6e-22
4fo0_A593 Human Actin-Related Protein Arp8 In Its Atp-Bound S 2e-06
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375 Back     alignment and structure 
Iteration: 1

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/215 (94%), Positives = 209/215 (97%)
Query: 15  YSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 74
           ++ P   GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 220
Query: 75  LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 134
           LDFEQEMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET +N
Sbjct: 221 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFN 280
Query: 135 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 194
           SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVW
Sbjct: 281 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 340
Query: 195 IGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 229
           IGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375 Back     alignment and structure
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374 Back     alignment and structure
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375 Back     alignment and structure
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374 Back     alignment and structure
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375 Back     alignment and structure
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375 Back     alignment and structure
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374 Back     alignment and structure
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359 Back     alignment and structure
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370 Back     alignment and structure
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371 Back     alignment and structure
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375 Back     alignment and structure
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371 Back     alignment and structure
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376 Back     alignment and structure
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375 Back     alignment and structure
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377 Back     alignment and structure
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376 Back     alignment and structure
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377 Back     alignment and structure
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375 Back     alignment and structure
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375 Back     alignment and structure
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375 Back     alignment and structure
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368 Back     alignment and structure
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372 Back     alignment and structure
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373 Back     alignment and structure
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371 Back     alignment and structure
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375 Back     alignment and structure
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364 Back     alignment and structure
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 Back     alignment and structure
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375 Back     alignment and structure
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 Back     alignment and structure
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394 Back     alignment and structure
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394 Back     alignment and structure
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 Back     alignment and structure
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 Back     alignment and structure
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S. Cerevisiae Complexed With Atp Length = 498 Back     alignment and structure
>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State Length = 593 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 1e-157
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 1e-149
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 1e-148
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 1e-138
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 1e-93
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 3e-51
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 Back     alignment and structure
 Score =  439 bits (1132), Expect = e-157
 Identities = 192/208 (92%), Positives = 201/208 (96%)

Query: 22  GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 81
           GYALPHAI+RLDLAGRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EM
Sbjct: 168 GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEM 227

Query: 82  ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDV 141
           ATAA+S+SLEKSYELPDGQVITIGNERFRCPE LFQPSF+GMES GIHET YNSIMKCD+
Sbjct: 228 ATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDI 287

Query: 142 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 201
           DIRKDLYAN V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILA
Sbjct: 288 DIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 347

Query: 202 SLSTFQQMWISKQEYDESGPGIVHRKCF 229
           SLSTFQQMWI+KQEYDE+GP IVHRKCF
Sbjct: 348 SLSTFQQMWITKQEYDEAGPSIVHRKCF 375
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query229
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 100.0
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 100.0
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 100.0
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 100.0
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 100.0
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 100.0
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 99.86
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 99.62
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.59
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 99.5
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 99.36
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.33
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 99.21
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.2
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 99.2
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 99.19
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 99.11
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 98.98
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 98.85
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 98.74
4b9q_A 605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 98.72
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 98.72
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 98.68
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 98.64
3js6_A355 Uncharacterized PARM protein; partition, segregati 98.58
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 97.02
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 96.76
3cet_A334 Conserved archaeal protein; Q6M145, MRR63, NESG, X 95.19
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 93.92
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 93.39
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 92.27
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 91.96
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 91.51
1u6z_A 513 Exopolyphosphatase; alpha/beta protein, askha (ace 91.15
3hi0_A 508 Putative exopolyphosphatase; 17739545, structural 89.98
3aap_A353 Ectonucleoside triphosphate diphosphohydrolase I; 86.84
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=1.3e-62  Score=429.47  Aligned_cols=224  Identities=33%  Similarity=0.600  Sum_probs=200.9

Q ss_pred             cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhc------------------CCCCCch------
Q psy2717           2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTER------------------GYSFTTT------   57 (229)
Q Consensus         2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~------------------~~~~~~~------   57 (229)
                      +||||||+|++.|+|+||++|++++++++++++||+++|++|+++|+++                  +++++..      
T Consensus       162 ~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~  241 (498)
T 3qb0_A          162 PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDY  241 (498)
T ss_dssp             SSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHH
T ss_pred             CeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHH
Confidence            6899999999999999999999999999999999999999999999864                  3333321      


Q ss_pred             h-HHHHHHHHHHhccccccc--HHHHHHHhhcCCCCcceEeCCCCceeeecCc-cccccccccCCCCCCC----------
Q psy2717          58 A-EREIVRDIKEKLCYVALD--FEQEMATAAASTSLEKSYELPDGQVITIGNE-RFRCPEALFQPSFLGM----------  123 (229)
Q Consensus        58 ~-~~~~~~~iK~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpdg~~i~~~~~-r~~~~E~lF~p~~~~~----------  123 (229)
                      . +++++++|||++|||+.+  ++.+...  ......+.|+||||+.|.++.| ||++||.||+|++++.          
T Consensus       242 ~~~~~iv~~iKE~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~  319 (498)
T 3qb0_A          242 ANNRGFFQECKETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSG  319 (498)
T ss_dssp             HHHHTHHHHHHHHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSS
T ss_pred             HHHHHHHHHHHHhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCcccccccccc
Confidence            2 456899999999999986  5544322  1234578999999999999999 9999999999987643          


Q ss_pred             ----------------------------------------------------------------------CCCCHHHHHH
Q psy2717         124 ----------------------------------------------------------------------ESCGIHETVY  133 (229)
Q Consensus       124 ----------------------------------------------------------------------~~~~l~~~I~  133 (229)
                                                                                            +..||+++|.
T Consensus       320 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~  399 (498)
T 3qb0_A          320 VVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVY  399 (498)
T ss_dssp             CCCCCSCCCCCCCBCC-----------------------------------------------------CCSCCHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHH
Confidence                                                                                  5579999999


Q ss_pred             HHHhcCCHHHHHHhhcCeEEecCCCCccchHHHHHHHHHhhCCCCCeEEEECC---CCCccceehhhhHhhccccccccc
Q psy2717         134 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMW  210 (229)
Q Consensus       134 ~si~~~~~d~r~~l~~nIiltGG~s~i~Gl~~RL~~el~~~~~~~~~v~v~~~---~~~~~~~w~Ggsila~l~~~~~~~  210 (229)
                      +||.+||+|+|+.|++||+|+||+|++|||.+||++||+.+.| ..+++|.++   ++|.+++|+||||||+|++|+++|
T Consensus       400 ~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~w  478 (498)
T 3qb0_A          400 SSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLW  478 (498)
T ss_dssp             HHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTS
T ss_pred             HHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceE
Confidence            9999999999999999999999999999999999999999999 779999987   789999999999999999999999


Q ss_pred             ccHHHHhhcCc-cchhhcc
Q psy2717         211 ISKQEYDESGP-GIVHRKC  228 (229)
Q Consensus       211 Itr~ey~e~G~-~~~~~k~  228 (229)
                      |||+||+|+|+ ++++|||
T Consensus       479 itk~EY~E~G~~~iv~~kc  497 (498)
T 3qb0_A          479 VGKKEYEEVGVERLLNDRF  497 (498)
T ss_dssp             EEHHHHHTTCCHHHHHHTT
T ss_pred             EEHHHHhhhCcHhhccccC
Confidence            99999999999 9999998
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 229
d2fxua2225 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI 1e-107
d1k8ka2258 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 2e-97
d1k8kb1190 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 4e-73
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  305 bits (783), Expect = e-107
 Identities = 189/208 (90%), Positives = 198/208 (95%)

Query: 18  PYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 77
           P   GYALPHAI+RLDLAGRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDF
Sbjct: 18  PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDF 77

Query: 78  EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 137
           E EMATAA+S+SLEKSYELPDGQVITIGNERFRCPE LFQPSF+GMES GIHET YNSIM
Sbjct: 78  ENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIM 137

Query: 138 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGG 197
           KCD+DIRKDLYAN V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGG
Sbjct: 138 KCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 197

Query: 198 SILASLSTFQQMWISKQEYDESGPGIVH 225
           SILASLSTFQQMWI+KQEYDE+GP IVH
Sbjct: 198 SILASLSTFQQMWITKQEYDEAGPSIVH 225
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query229
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 100.0
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 100.0
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.55
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.49
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 99.11
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 98.91
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 98.71
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 98.54
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 94.62
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 94.52
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 94.41
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 90.97
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 90.23
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 90.17
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 90.02
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 86.55
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 84.91
d1xc3a2176 Putative fructokinase YhdR {Bacillus subtilis [Tax 83.33
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 83.28
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.3e-66  Score=411.81  Aligned_cols=224  Identities=85%  Similarity=1.282  Sum_probs=214.6

Q ss_pred             cceeEEecCCCeeEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHhcccccccHHHHH
Q psy2717           2 ATRKLSTVSLHNKYSNPYGNGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM   81 (229)
Q Consensus         2 ~sglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~l~~~l~~ll~~~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~   81 (229)
                      +||||||+|++.|+|+||+||++++++++++++||++||++|+++|.+++.++....+.+.++++|+.+|+++.++..+.
T Consensus         2 tTglVVDiG~~~t~v~PV~eG~~l~~~~~~~~~GG~~lt~~l~~~L~~~~~~~~~~~~~~~~~~~ke~~~~~~~d~~~e~   81 (225)
T d2fxua2           2 TTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEM   81 (225)
T ss_dssp             SSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHH
T ss_pred             CEEEEEEcCCCcEEEEEEECCEEchhceEEEECcHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHhhcccchhHHH
Confidence            79999999999999999999999999999999999999999999999999888778888999999999999999988887


Q ss_pred             HHhhcCCCCcceEeCCCCceeeecCccccccccccCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhcCeEEecCCCCcc
Q psy2717          82 ATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYP  161 (229)
Q Consensus        82 ~~~~~~~~~~~~~~lpdg~~i~~~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~si~~~~~d~r~~l~~nIiltGG~s~i~  161 (229)
                      ......+.....|++|||+.+.++.+|+.+||+||+|...+.+..+|+++|.+||.+||+|+|+.|++||+|+||+|++|
T Consensus        82 ~~~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~gl~~~i~~sI~~~~~d~r~~l~~nIvl~GG~s~~~  161 (225)
T d2fxua2          82 ATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP  161 (225)
T ss_dssp             HHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCST
T ss_pred             hhcccCcccceeEECCCCCEEEEchHhccccHhhcCccccCCccCChhHHHHHHhhcCCcchhhhhhcCEEEeCCcccCC
Confidence            76655666788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHhhCCCCCeEEEECCCCCccceehhhhHhhcccccccccccHHHHhhcCccchh
Q psy2717         162 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVH  225 (229)
Q Consensus       162 Gl~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Ggsila~l~~~~~~~Itr~ey~e~G~~~~~  225 (229)
                      ||.+||++||..+.|...++++..+++|++++|+||||+|++++|+++||||+||+|+|++|||
T Consensus       162 G~~~RL~~El~~~~~~~~~~~v~~~~~~~~~aW~Ggsilasl~~f~~~~itk~eY~E~G~~ivh  225 (225)
T d2fxua2         162 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH  225 (225)
T ss_dssp             THHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC
T ss_pred             chhHHHHhHHHHhhccccceEEecCCCCCeeEEeCHhhhhcCccHhhEEEEHHHHHhhCccccC
Confidence            9999999999999998889999999999999999999999999999999999999999999987
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure