Psyllid ID: psy2748

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690
MASAKTGKTPRKVAFSQNNGSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILNNEKKMESLASAMPLIDSGVLYRLRKDVHVERLRMMKERQEEKTKATKSKLSQKFQSKMQAQAETYESKLRHNEKKVIRKVKNLIDSQLPDTSSLSSCSSGSAPPIPTPRTITSDYNTRTTRSGKAGDVQSTPNVTARRNAPAPPRSTRRRSRSAGPPTNPAGTWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLRQTSPLSSPVKHRIAAFNARSTEDIENRCQMGIEGHSNRMPKK
ccccccccccccccccccccccccEEEEEEEccccccccccccEEccccEEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEHHHHHccccccccccccccccccccEEEcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEccccccEEEcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHccccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHcccccccccccccccccccccccccccccccccEEEEcccHHHccccccccccccccccccccccHHHHccccccccccccccccc
ccccccccccccccccccccccccEEEEEEEEccccHHHcccEEEEEccEEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEEEEcHHHHHHccccccccEEEEEcccccccHHcHHHHHHccHHHHHHHHccccccccEEEEEcccccccccEEEEEEEEEEEEccccccccEEEEEEEEHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHHHHHHHHHcccccHccccccccccHcccEccccccccEEHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHcccHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEcccEEEEEEccccEEEEcHHHcccHHHccccccccccEEEEEEEEcccccccccccccHEEHHHHHHHHcccccccccccEEEEEEccccHHHHHHHccccccccccccccc
masaktgktprkvafsqnngssdplqvfcrirpmdnsydescISVVsdttvqltppdgsnpryfnnKEVQYVFKKIFnvdvgqkqvysEVAHPLVANLIHAKNGLlltygvtgsgktytmngtnsdggiMMRCIDVLFNsigryqprkrtfrpdklngfevQSQVDILLQEQAEMngeltkrtpgpglkrnksdpemeprikdaskvedieednvYSVFVSYIEIYNNSVHDlledmpegnnARIQLNNRliredgdknmfvhgvneievttpdeafqSIGNINNSLMTLRTCLEILRENqlqgtnkippfresklthlfksyftgdgdvrmivcvnprvedydenLAVMKFAEMSQEVQISkalpsrldfgltpgrrKFNEASKKMREILNNEKKMESLAsamplidsgvlyRLRKDVHVERLRMMKERQEEKTKATKSKLSQKFQSKMQAQAETYESKLRHNEKKVIRKVKNLidsqlpdtsslsscssgsappiptprtitsdyntrttrsgkagdvqstpnvtarrnapapprstrrrsrsagpptnpagtwlhhtpgqvllntphgtvfqptgwkkrksvtaltdvkdivdpklakyslmtqepntdgemeTHLFKVNyldgdvlptvgggAQVVFNELEtlrqtsplsspvkHRIAAFNARSTEDIENRCqmgieghsnrmpkk
masaktgktprkvafsqnngssdplqVFCRIRPMDNSYDESCISVVSDTTVqltppdgsnpryfNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMngtnsdggIMMRCIDVLFNSIGRYQPRKRtfrpdklngfEVQSQVDILLQEQAEMngeltkrtpgpglkrnksdpemeprikdaskvedieednVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQlqgtnkippfreskLTHLFKSyftgdgdvRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKalpsrldfgltpgrrkfneaSKKMREILNNEKKMESLASamplidsgvlyrLRKDVHVERLRMmkerqeektkatksklsqkfQSKMQAQAetyesklrhneKKVIRKVKNLIdsqlpdtsslsscssgsappiptprtitsdyntrttrsgkagdvqstpnvtarrnapapprstrrrsrsagPPTNPAGTWLHHTPGQVLLNTPHGtvfqptgwkkrksvtaltdvkdivdpklakyslmtqepntdgeMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLrqtsplsspvkHRIAAfnarstedienrcqmgieghsnrmpkk
MASAKTGKTPRKVAFSQNNGSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILNNEKKMESLASAMPLIDSGVLYRLRKDVHVERLRMMKERQEEKTKATKSKLSQKFQSKMQAQAETYESKLRHNEKKVIRKVKNLIDSQLPDTsslsscssgsAPPIPTPRTITSDYNTRTTRSGKAGDVQSTPNVtarrnapapprstrrrsrsagpptNPAGTWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLRQTSPLSSPVKHRIAAFNARSTEDIENRCQMGIEGHSNRMPKK
*************************QVFCRIRPMDNSYDESCISVVSDTTVQL*******PRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDIL*******************************************EDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEM*************************************************PLIDSGVLYRLRKDVHV*************************************************************************************************************************************TWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLM*********METHLFKVNYLDGDVLPTVGGGAQVVFNELETL*******************************************
***************************FCRIRPMDNSYDESCISVVSDTTVQL****************QYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILL*************************PEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMP************************H*VNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPS**************************************************************************************************************************************************************************************************************************************************************************GGGAQVVFNELE*****************************RCQMG***********
**************FSQNNGSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGP**************IKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILNNEKKMESLASAMPLIDSGVLYRLRKDVHVERLRMMK*******************************KLRHNEKKVIRKVKNLIDSQ****************PIPTPRTITSDYNT*****************************************NPAGTWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLRQTSPLSSPVKHRIAAFNARSTEDIENRCQMGIEGHSNRMPKK
**********************DPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGV*******PDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILN*****************GVLYR**KDVHVERLRMMKERQEEKTKATKSKLSQKFQSKMQAQAETYESKLRHNEKKVIRKVKNLIDSQLPDTSSLSSCSSGSAPPIPTPRTITSDYNTRTTRSGK*******************************PPTNPAGTWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLRQTSPLSSPVKHRIAAFNARSTEDIENRCQMGI**********
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MASAKTGKTPRKVAFSQNNGSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILNNEKKMESLASAMPLIDSGVLYRLRKDVHVERLRMMKERQEEKTKATKSKLSQKFQSKMQAQAETYESKLRHNEKKVIRKVKNLIDSQLPDTSSLSSCSSGSAPPIPTPRTITSDYNTRTTRSGKAGDVQSTPNVTARRNAPAPPRSTRRRSRSAGPPTNPAGTWLHHTPGQVLLNTPHGTVFQPTGWKKRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGGGAQVVFNELETLRQTSPLSSPVKHRIAAFNARSTEDIENRCQMGIEGHSNRMPKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query690 2.2.26 [Sep-21-2011]
Q02241 960 Kinesin-like protein KIF2 yes N/A 0.389 0.280 0.432 2e-61
Q80WE4 1774 Kinesin-like protein KIF2 no N/A 0.495 0.192 0.260 3e-23
P53086805 Kinesin-like protein KIP3 yes N/A 0.446 0.382 0.256 4e-21
Q29RT6 888 Kinesin-like protein KIF2 no N/A 0.382 0.297 0.258 4e-20
O95235 890 Kinesin-like protein KIF2 no N/A 0.379 0.294 0.246 2e-18
Q9P2E2 1029 Kinesin-like protein KIF1 no N/A 0.502 0.337 0.239 6e-18
Q61771747 Kinesin-like protein KIF3 no N/A 0.468 0.432 0.235 7e-18
O15066747 Kinesin-like protein KIF3 no N/A 0.468 0.432 0.235 1e-17
Q99PW8 1038 Kinesin-like protein KIF1 no N/A 0.644 0.428 0.215 3e-17
Q96Q89 1820 Kinesin-like protein KIF2 no N/A 0.368 0.139 0.275 1e-16
>sp|Q02241|KIF23_HUMAN Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3 Back     alignment and function desciption
 Score =  238 bits (606), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/287 (43%), Positives = 183/287 (63%), Gaps = 18/287 (6%)

Query: 1   MASAKTGKTPRKVAFSQNNGSS--DPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDG 58
           M SA+  KTPRK    + + ++  DP+ V+CR+RP+     E CI V+++TTVQL  P+G
Sbjct: 1   MKSAR-AKTPRKPTVKKGSQTNLKDPVGVYCRVRPLGFPDQECCIEVINNTTVQLHTPEG 59

Query: 59  SN-PRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKT 117
               R  + KE QY FK++F     QK+++  VA+PLV +LIH KNGLL TYGVTGSGKT
Sbjct: 60  YRLNRNGDYKETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKT 119

Query: 118 YTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNG 177
           +TM G+  +GG++ RC+D++FNSIG +Q ++  F+ +  N  ++Q +VD LL+ Q     
Sbjct: 120 HTMTGSPGEGGLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQ----- 174

Query: 178 ELTKRTPGPGLKRNKSDPEMEPRIKDA------SKVEDIEEDNVYSVFVSYIEIYNNSVH 231
              KR   P  K + S  +++P   D        K E+++ED+VY VFVSYIEIYNN ++
Sbjct: 175 ---KREAMPNPKTSSSKRQVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIY 231

Query: 232 DLLEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQ 278
           DLLE++P          ++L+RED + NM+V G  E+EV + +EAF+
Sbjct: 232 DLLEEVPFDPIKPKPPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFE 278
Component of the centralspindlin complex that serves as a microtubule-dependent and Rho-mediated signaling required for the myosin contractile ring formation during the cell cycle cytokinesis. Essential for cytokinesis in Rho-mediated signaling. Required for the localization of ECT2 to the central spindle. Plus-end-directed motor enzyme that moves antiparallel microtubules in vitro.
Homo sapiens (taxid: 9606)
>sp|Q80WE4|KI20B_MOUSE Kinesin-like protein KIF20B OS=Mus musculus GN=Kif20b PE=1 SV=3 Back     alignment and function description
>sp|P53086|KIP3_YEAST Kinesin-like protein KIP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KIP3 PE=1 SV=1 Back     alignment and function description
>sp|Q29RT6|KI20A_BOVIN Kinesin-like protein KIF20A OS=Bos taurus GN=KIF20A PE=2 SV=1 Back     alignment and function description
>sp|O95235|KI20A_HUMAN Kinesin-like protein KIF20A OS=Homo sapiens GN=KIF20A PE=1 SV=1 Back     alignment and function description
>sp|Q9P2E2|KIF17_HUMAN Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=2 SV=3 Back     alignment and function description
>sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1 Back     alignment and function description
>sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1 Back     alignment and function description
>sp|Q99PW8|KIF17_MOUSE Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1 Back     alignment and function description
>sp|Q96Q89|KI20B_HUMAN Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF20B PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query690
432851630 989 PREDICTED: kinesin-like protein KIF23-li 0.672 0.469 0.367 6e-88
348538669 1016 PREDICTED: kinesin-like protein KIF23 [O 0.665 0.451 0.363 3e-87
348505655 807 PREDICTED: kinesin-like protein KIF23-li 0.521 0.446 0.405 1e-83
410912776 816 PREDICTED: kinesin-like protein KIF23-li 0.540 0.457 0.388 8e-83
195135477 892 GI16586 [Drosophila mojavensis] gi|19391 0.584 0.451 0.368 3e-80
195375082 891 GJ12838 [Drosophila virilis] gi|19415349 0.569 0.441 0.378 6e-80
47230690 878 unnamed protein product [Tetraodon nigro 0.505 0.397 0.386 2e-79
195012171 895 GH15541 [Drosophila grimshawi] gi|193896 0.556 0.429 0.377 3e-79
28839561 867 Kinesin family member 23 [Danio rerio] g 0.527 0.419 0.383 5e-79
18858939 867 kinesin-like protein KIF23 [Danio rerio] 0.527 0.419 0.383 5e-79
>gi|432851630|ref|XP_004067006.1| PREDICTED: kinesin-like protein KIF23-like [Oryzias latipes] Back     alignment and taxonomy information
 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 207/564 (36%), Positives = 301/564 (53%), Gaps = 100/564 (17%)

Query: 1   MASAKTGKTPRKVAFSQ-NNGSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGS 59
           M     G+TPR+    + +N   DP+ V+CRIRP+ +  +E CI ++S TT+QL  PDG 
Sbjct: 1   MQKTSKGRTPRRPGQKKPSNTERDPVGVYCRIRPLISEDEECCIEMISSTTIQLHAPDGL 60

Query: 60  NP-RYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTY 118
              R    KE QY FKK+F V+  Q +++ +VA PLV +LIH KNGLL TYGVTGSGKT+
Sbjct: 61  KANRNGEYKETQYSFKKVFGVNTTQMELFQDVAKPLVNDLIHCKNGLLFTYGVTGSGKTF 120

Query: 119 TMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGE 178
           TM G+  +GG++ R +D+LFNSIG +Q ++  F+PD  NG E+QSQVD LL+ Q   + +
Sbjct: 121 TMTGSPGEGGLLPRSLDMLFNSIGPFQAKRYVFKPDDKNGMEIQSQVDALLERQKRDSQQ 180

Query: 179 LTKRTPGPGLKRNKSDPEMEPRIK--DASKVEDIEEDNVYSVFVSYIE-----IYN---- 227
              +TP     R K+DPE    I   +A K E ++ED  +SVFVSYIE     IY+    
Sbjct: 181 SVPKTPS---SRQKADPEFADMISPDEACKSESVDEDCCFSVFVSYIEIYNNYIYDLLED 237

Query: 228 ----------------------------------NSVHDLLEDMPEGNNARIQLNNRLIR 253
                                              S  +  E   +G   R   N +L R
Sbjct: 238 APFDPIRPKXPQSKVLREDQNHNMYVAGCTEVEVKSTEEAFEIFWKGQKKRRIANTQLNR 297

Query: 254 E-----------------DGDKNMFVHGVNEIEVT-----------------TPDEAFQS 279
           E                 D D +  +   N++ V+                       + 
Sbjct: 298 ESSRSHSVFTVKLVQAPLDADGDHILQDKNQVNVSQLCLVDLAGSERTSRTRAEGSRLRE 357

Query: 280 IGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPR 339
            GNIN SLMTLRTC+E+LRENQ+ GTNK+ P+R+SK+THLFK+YF G+G VRMIVCVNP 
Sbjct: 358 AGNINQSLMTLRTCMEVLRENQMCGTNKMVPYRDSKVTHLFKNYFDGEGKVRMIVCVNPN 417

Query: 340 VEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMREILNNEKKMES 399
            +DY+E+  VM+FAEM+QEV++++ +  R  + L  GRR  N+A K      ++   +  
Sbjct: 418 ADDYEESALVMRFAEMTQEVEVARPV-DRAIYSLPAGRRHKNQAFKGPFGNTDDPGLLNQ 476

Query: 400 LASAMPLI---------DSGVLYRLRKDVH-VERLRMMKERQEEKTKATKSKLSQKFQSK 449
           L  ++P +         D  +L RL + +   + +R M + Q  +T  T   + Q+F S+
Sbjct: 477 LIESLPALPPCELVDPTDDQMLPRLIEVLERRQHIRQMMKEQFNQTANTLQSMLQQFNSQ 536

Query: 450 MQAQAETY----ESKLRHNEKKVI 469
           + A+ ET+    +SKL   +K ++
Sbjct: 537 LGAK-ETFLHDQQSKLNEKDKVIL 559

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota
>gi|348538669|ref|XP_003456813.1| PREDICTED: kinesin-like protein KIF23 [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|348505655|ref|XP_003440376.1| PREDICTED: kinesin-like protein KIF23-like [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|410912776|ref|XP_003969865.1| PREDICTED: kinesin-like protein KIF23-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|195135477|ref|XP_002012159.1| GI16586 [Drosophila mojavensis] gi|193918423|gb|EDW17290.1| GI16586 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195375082|ref|XP_002046332.1| GJ12838 [Drosophila virilis] gi|194153490|gb|EDW68674.1| GJ12838 [Drosophila virilis] Back     alignment and taxonomy information
>gi|47230690|emb|CAF99883.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
>gi|195012171|ref|XP_001983510.1| GH15541 [Drosophila grimshawi] gi|193896992|gb|EDV95858.1| GH15541 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|28839561|gb|AAH47805.1| Kinesin family member 23 [Danio rerio] gi|182890080|gb|AAI65250.1| Kif23 protein [Danio rerio] Back     alignment and taxonomy information
>gi|18858939|ref|NP_571430.1| kinesin-like protein KIF23 [Danio rerio] gi|6006743|gb|AAF00594.1|AF139990_1 mitotic kinesin-like protein 1 [Danio rerio] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query690
FB|FBgn0011692 887 pav "pavarotti" [Drosophila me 0.381 0.296 0.466 2.8e-130
UNIPROTKB|A5D7N6 952 KIF23 "Uncharacterized protein 0.395 0.286 0.452 1.3e-113
UNIPROTKB|J9P721 953 KIF23 "Uncharacterized protein 0.391 0.283 0.444 2.8e-110
UNIPROTKB|F1SIT8 953 KIF23 "Uncharacterized protein 0.395 0.286 0.445 6.7e-110
ZFIN|ZDB-GENE-991019-4 867 kif23 "kinesin family member 2 0.388 0.309 0.460 2.2e-109
UNIPROTKB|F1PML0 964 KIF23 "Uncharacterized protein 0.386 0.276 0.445 8.8e-109
UNIPROTKB|Q02241 960 KIF23 "Kinesin-like protein KI 0.392 0.282 0.435 4.6e-108
UNIPROTKB|H7BYN4 952 KIF23 "Kinesin-like protein KI 0.392 0.284 0.435 1e-107
UNIPROTKB|D4AAG4 952 Kif23 "Protein Kif23" [Rattus 0.394 0.285 0.440 1.1e-107
UNIPROTKB|E1BS36 804 KIF23 "Uncharacterized protein 0.298 0.256 0.469 4.5e-97
FB|FBgn0011692 pav "pavarotti" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 608 (219.1 bits), Expect = 2.8e-130, Sum P(3) = 2.8e-130
 Identities = 133/285 (46%), Positives = 179/285 (62%)

Query:     8 KTPR--KVAFSQNNGSSD----PLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDG--- 58
             KTPR  +    Q   +SD    P+ VFCR+RP+ +  D + + V + TT+ L P D    
Sbjct:    14 KTPRVHQTVEKQRRDTSDKARDPVNVFCRVRPLQSDADLTSLRVKNSTTIALNPQDQLLQ 73

Query:    59 -SNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKT 117
                P     +EVQY+FK +F  D  Q+ VY+ VA PLV NL+  +N LL TYGVTGSGKT
Sbjct:    74 HHKPHNGAQREVQYIFKHVFQPDATQQDVYAAVAQPLVENLLKGRNSLLFTYGVTGSGKT 133

Query:   118 YTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNG 177
             YTM G     GIM RC+DVLF +I  YQ +K  F+PDKLNGFE+ S+ D LL+ Q EMN 
Sbjct:   134 YTMTGNLRHRGIMPRCLDVLFRTISDYQAKKFVFKPDKLNGFEILSEEDALLERQHEMN- 192

Query:   178 ELTKRTPGPG---LKRNKSDPEMEPRIK-DASKVEDIEEDNVYSVFVSYIEIYNNSVHDL 233
                +R  G G    +   SDPE+  +   +   +  ++EDN+YSVFV+YIEIYNNSV+DL
Sbjct:   193 ---QRFAGSGRFAFRHKDSDPEIASQASVEPIPLLGLDEDNMYSVFVTYIEIYNNSVYDL 249

Query:   234 LEDMPEGNNARIQLNNRLIREDGDKNMFVHGVNEIEVTTPDEAFQ 278
             LED   G    +Q  +++IRED +++MFVHGV E+EV T ++A +
Sbjct:   250 LED--SGIQKTLQ--SKIIREDANRHMFVHGVTEVEVKTVEDALE 290
GO:0007422 "peripheral nervous system development" evidence=NAS;TAS
GO:0000910 "cytokinesis" evidence=IMP;NAS
GO:0005871 "kinesin complex" evidence=ISS
GO:0003777 "microtubule motor activity" evidence=IEA;ISS
GO:0007018 "microtubule-based movement" evidence=IEA;ISS
GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=NAS
GO:0005813 "centrosome" evidence=NAS
GO:0005819 "spindle" evidence=NAS
GO:0016321 "female meiosis chromosome segregation" evidence=IMP
GO:0000916 "actomyosin contractile ring contraction" evidence=IMP
GO:0005634 "nucleus" evidence=IDA
GO:0030496 "midbody" evidence=IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005875 "microtubule associated complex" evidence=IEA
GO:0007224 "smoothened signaling pathway" evidence=IGI
GO:0032507 "maintenance of protein location in cell" evidence=IMP
GO:0007052 "mitotic spindle organization" evidence=IMP
GO:0051533 "positive regulation of NFAT protein import into nucleus" evidence=IMP
GO:0030111 "regulation of Wnt receptor signaling pathway" evidence=IGI;IMP
GO:0001709 "cell fate determination" evidence=IMP
GO:0051298 "centrosome duplication" evidence=IMP
GO:0022008 "neurogenesis" evidence=IMP
GO:0007525 "somatic muscle development" evidence=IMP
GO:0070507 "regulation of microtubule cytoskeleton organization" evidence=IMP
UNIPROTKB|A5D7N6 KIF23 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9P721 KIF23 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SIT8 KIF23 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-991019-4 kif23 "kinesin family member 23" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PML0 KIF23 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q02241 KIF23 "Kinesin-like protein KIF23" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H7BYN4 KIF23 "Kinesin-like protein KIF23" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D4AAG4 Kif23 "Protein Kif23" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BS36 KIF23 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query690
cd00106328 cd00106, KISc, Kinesin motor domain 1e-46
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 3e-46
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 4e-43
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 4e-37
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 1e-24
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 1e-21
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 5e-21
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 3e-20
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 5e-20
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 7e-20
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 2e-18
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 2e-17
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 2e-16
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 2e-15
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 3e-15
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 2e-14
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 5e-14
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 1e-11
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 8e-11
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 2e-10
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 9e-10
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 8e-09
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 4e-08
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 1e-07
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 6e-07
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 2e-06
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 8e-06
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 1e-05
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 1e-04
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 1e-04
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 1e-04
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 2e-04
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 3e-04
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 3e-04
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 7e-04
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 0.001
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 0.002
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information 
 Score =  168 bits (427), Expect = 1e-46
 Identities = 92/371 (24%), Positives = 153/371 (41%), Gaps = 86/371 (23%)

Query: 24  PLQVFCRIRPM---DNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVD 80
            ++V  RIRP+   ++  +ESCI+V  + TV LTPP              + F  +F+ +
Sbjct: 1   NIRVVVRIRPLNGRESKSEESCITVDDNKTVTLTPPKDGR----KAGPKSFTFDHVFDPN 56

Query: 81  VGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNS 140
             Q+ VY   A PLV +++   NG +  YG TGSGKTYTM G+  D GI+ R ++ LFN 
Sbjct: 57  STQEDVYETTAKPLVESVLEGYNGTIFAYGQTGSGKTYTMFGSPKDPGIIPRALEDLFNL 116

Query: 141 IGRYQPRKRTFRPDKLNGFEVQSQVDI-------LLQEQAEMNGELTKRTPGPGLKRNKS 193
           I   + + ++F         V S ++I       LL  +                   + 
Sbjct: 117 IDERKEKNKSFS------VSV-SYLEIYNEKVYDLLSPEPPSKP-----------LSLRE 158

Query: 194 DPEMEPRIKDASKVEDIEEDNVY-------------------------SVFVSYIEIYNN 228
           DP+    +K  ++VE    ++                           ++F  ++E  N 
Sbjct: 159 DPKGGVYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHAIFTIHVEQRNT 218

Query: 229 SVHDLLEDMPEGNNARIQL-----NNRLIREDGDKNMFVHGVNEIEVTTPDEAFQSIGNI 283
           +      D     ++++ L     + R  +   + +               EA ++I   
Sbjct: 219 T-----NDGRSIKSSKLNLVDLAGSERAKKTGAEGDRL------------KEA-KNI--- 257

Query: 284 NNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDY 343
           N SL  L   +  L   Q     K  P+R+SKLT L +    G+    MI  ++P  E+Y
Sbjct: 258 NKSLSALGNVISALSSGQ---KKKHIPYRDSKLTRLLQDSLGGNSKTLMIANISPSSENY 314

Query: 344 DENLAVMKFAE 354
           DE L+ ++FA 
Sbjct: 315 DETLSTLRFAS 325

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 328
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 690
KOG0247|consensus809 100.0
KOG0243|consensus 1041 100.0
KOG0245|consensus 1221 100.0
KOG4280|consensus574 100.0
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 100.0
PLN03188 1320 kinesin-12 family protein; Provisional 100.0
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 100.0
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 100.0
KOG0241|consensus 1714 100.0
KOG0240|consensus607 100.0
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 100.0
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 100.0
KOG0242|consensus675 100.0
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 100.0
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 100.0
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 100.0
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 100.0
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 100.0
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 100.0
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 100.0
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 100.0
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 100.0
KOG0239|consensus670 100.0
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 100.0
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 100.0
KOG0246|consensus676 100.0
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 100.0
KOG0244|consensus 913 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 100.0
COG0556663 UvrB Helicase subunit of the DNA excision repair c 95.14
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 92.75
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 91.6
PRK06893229 DNA replication initiation factor; Validated 91.35
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 90.81
PRK12377248 putative replication protein; Provisional 86.46
PRK06620214 hypothetical protein; Validated 86.38
PRK05642234 DNA replication initiation factor; Validated 85.57
PRK14086617 dnaA chromosomal replication initiation protein; P 85.02
PRK09087226 hypothetical protein; Validated 84.59
PRK08116268 hypothetical protein; Validated 84.34
PF04851184 ResIII: Type III restriction enzyme, res subunit; 83.68
PRK07952244 DNA replication protein DnaC; Validated 83.59
PRK14087450 dnaA chromosomal replication initiation protein; P 82.51
PRK08084235 DNA replication initiation factor; Provisional 81.92
PRK14088440 dnaA chromosomal replication initiation protein; P 81.8
TIGR02928365 orc1/cdc6 family replication initiation protein. M 81.33
PRK06526254 transposase; Provisional 81.22
PRK10436462 hypothetical protein; Provisional 81.16
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 80.91
PRK00411394 cdc6 cell division control protein 6; Reviewed 80.72
COG5008375 PilU Tfp pilus assembly protein, ATPase PilU [Cell 80.55
>KOG0247|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.8e-113  Score=944.96  Aligned_cols=594  Identities=39%  Similarity=0.626  Sum_probs=450.5

Q ss_pred             CCCCCCCCCEEEEEEecCCC-CCCCCceEEEecCcEEEEcCCCCC-CCC--cCCCcceEEEecEEeCCCCChHHHHHHhh
Q psy2748          16 SQNNGSSDPLQVFCRIRPMD-NSYDESCISVVSDTTVQLTPPDGS-NPR--YFNNKEVQYVFKKIFNVDVGQKQVYSEVA   91 (690)
Q Consensus        16 ~~~~~~~~~V~V~~RvRP~~-~~e~~~~i~v~~~~tv~l~~p~~~-~~r--~~~~~~~~f~Fd~VF~~~asQ~evF~~v~   91 (690)
                      ..+.+.+++|.||||+||+. ..++.+|+.|+++.+|++..|.+. ..+  +++..++.|.|.+||+|+++|.+||+.++
T Consensus        24 ~~S~~~~d~v~v~~rvrP~~~~~~~~g~l~v~n~~tivL~~P~d~~~~~~~n~~q~e~~fsFt~VF~p~~tQ~dvF~~~~  103 (809)
T KOG0247|consen   24 GASCESKDPVLVVCRVRPLSDASEDEGCLRVINEETIVLETPEDSFARRSVNGGQMEKKFSFTKVFGPSVTQADVFDTTV  103 (809)
T ss_pred             ccchhhhcchheeEeecCCCCCccccceEEEeccceeEeeCcHHHHhhhccCccceeeEeeeeeecCCCccHHHHHHHHh
Confidence            35678899999999999988 678999999999999999988887 444  77888999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEecccCCCCeeecCCCCCCCChHHHHHHHHHHHhcccCCCCccccCCCCCcceehhHHHHHH--
Q psy2748          92 HPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILL--  169 (690)
Q Consensus        92 ~plV~~~l~G~N~~IfaYGqTGSGKTyTm~G~~~~~GIiPR~l~~LF~~i~~~~~~~~~~~p~~~~~~~i~~e~~~ll--  169 (690)
                      .|+|.+++.|.|++||+||+|||||||||+|++.++||+||||+.||++|+.+++++++|+|...+.|++..+.+++|  
T Consensus       104 ~plV~dlLkgqn~LlFTyGVTgSGKTYTm~G~~~~~GIlPR~Ld~iF~siq~~~~~k~~~kp~~s~~~e~~~~~~alL~l  183 (809)
T KOG0247|consen  104 APLVKDLLKGQNSLLFTYGVTGSGKTYTMTGTPDRPGILPRALDVIFNSIQGRQAKKPVFKPLRSNLFEIKAEEDALLQL  183 (809)
T ss_pred             HHHHHHHHcccceeEEEeeccCCCceEEeecCCCCCCchHHHHHHHHHHhhceeccCceeccccchHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             HHHHHhhcccccCCCCCCCccCCCCCCCccccc-cccccccccCCceEEEEEEEEEEEccceeecccCCCCCCccccccc
Q psy2748         170 QEQAEMNGELTKRTPGPGLKRNKSDPEMEPRIK-DASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLN  248 (690)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sV~vSyiEIYNe~v~DLL~~~~~~~~~~~~~~  248 (690)
                      .|....++    +...+. ..+.++++++..+. ......+++.+..|+|||||+|||||+|||||++.+..   .....
T Consensus       184 kr~~~~nd----~~~ts~-~~~~~~~e~~e~~~~~e~~~~~l~~d~~ysV~VSf~EIYN~~iYDLLe~~s~q---~~~~~  255 (809)
T KOG0247|consen  184 KREAMLND----RKSTSK-AHRQSTPEYAEHIHVIEQPALELDEDIVYSVFVSFVEIYNNYIYDLLEDASFQ---GKLQK  255 (809)
T ss_pred             hhhhcccc----ccCcch-hhccccHHHHhhcchhcccccccCcCcEEEEEeeHHHHHHHHHHHhhcccccc---chhhh
Confidence            44444432    222221 23345667776665 23333447899999999999999999999999988642   11122


Q ss_pred             cceEeecCCCCeEEeeeEEEEecCchhhhhh-------------------------------------------------
Q psy2748         249 NRLIREDGDKNMFVHGVNEIEVTTPDEAFQS-------------------------------------------------  279 (690)
Q Consensus       249 ~~~ired~~~~~~V~gl~~v~V~s~eea~~~-------------------------------------------------  279 (690)
                      .+++++|.+++|||+|+++|+|.+.+||+++                                                 
T Consensus       256 ~~ll~~d~~~~~~Vkgl~~V~VssseEA~~l~~lGqk~r~~asT~lN~~SSRSHsVFtIkl~q~~~~~~s~~i~vSqlsL  335 (809)
T KOG0247|consen  256 LKLLREDTNGNMYVKGLTEVEVSSSEEALELFQLGQKRRRVASTKLNANSSRSHSVFTIKLVQAPRSQDSNQITVSQLSL  335 (809)
T ss_pred             hhhhhhccCCCeeeccccEEEeccHHHHHHHHHHHHhhhhhhheeccccccccceeEEEEeeecccccccCceeEEeeee
Confidence            4789999999999999999999999999998                                                 


Q ss_pred             ---------------------ccccccccchHHHHHHHHhhhcccCCCCCCCCCCchhhhcccccCCCCceeEEEEEeCC
Q psy2748         280 ---------------------IGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNP  338 (690)
Q Consensus       280 ---------------------a~~IN~SL~aL~~cI~aL~~~q~~g~~~~VPYRdSKLT~LLkdsLgGnskt~mIvcVsP  338 (690)
                                           |+|||.|||+||+||++|+++|..+.+++||||||||||+|++||.|.++++|||||+|
T Consensus       336 vDLAGSERt~rtq~sG~RLrEagNINtSLmTLg~Cie~LR~nqk~ks~~~VPyRdSKLThlfq~~f~G~gki~MIV~vnp  415 (809)
T KOG0247|consen  336 VDLAGSERTNRTQNSGERLREAGNINTSLMTLRRCIDVLRENQKSKSQKIVPYRDSKLTHLFKNYFDGKGKIRMIVCVNP  415 (809)
T ss_pred             eecccchhcccccchhHHHHhhccccHHHHHHHHHHHHHHHHhhhhccccCcchHHHHHHHHHHhcCCCCcEEEEEecCC
Confidence                                 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhHHHHHhhhhceeeccCCCCcCCCCCCchhhhhhHHHHHHHH-------HHHhhhhhhhhhccCCccccch
Q psy2748         339 RVEDYDENLAVMKFAEMSQEVQISKALPSRLDFGLTPGRRKFNEASKKMRE-------ILNNEKKMESLASAMPLIDSGV  411 (690)
Q Consensus       339 ~~~~~~ETl~TLrFA~rak~I~~~~~v~~~~~~~~~~~rr~~n~~~ke~~~-------~l~~~~~~~~~~~~~~~~~~e~  411 (690)
                      .+++|+|+|++|+||++|+.|.+.++++...+.++.|+++..++...+.-.       -+.+....+...... ..+.+.
T Consensus       416 ~~e~YdEnl~vlkFaeiaq~v~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~D~~l~e~~~~~~~~~~~-~~~~~~  494 (809)
T KOG0247|consen  416 KAEDYDENLNVLKFAEIAQEVEVARPVIKKQPSGLTPGREFSNQSTCELGNSTLMEDEGLREIPDLPTFEEQD-KNDKET  494 (809)
T ss_pred             chhhHHHHHHHHHHHHhcccccccCcccccCCcccCcccccccccccccCCcchhhcccccccCCchhHhhhh-hhhHHH
Confidence            999999999999999999999999999888888888877765543211100       000000000000000 000000


Q ss_pred             h------------------hhcccccH-------------------------HHHHHHHHHHHHHHH-------------
Q psy2748         412 L------------------YRLRKDVH-------------------------VERLRMMKERQEEKT-------------  435 (690)
Q Consensus       412 ~------------------~~~~~~~~-------------------------ee~~~~L~~el~e~e-------------  435 (690)
                      +                  .+....++                         ++.+.++.+++.+..             
T Consensus       495 l~~llee~~~~~~~~~~~~l~~~~~~k~~~~~q~~~~~~~~~~~~~~~l~~kke~i~q~re~~~~~~k~~l~~e~~~~i~  574 (809)
T KOG0247|consen  495 LDQLLEELEKRILLRTKEILQNNKSLKEKECRQKLMNAQLESQMLSSQLNDKKEQIEQLRDEIERLKKENLTTEYSIEIL  574 (809)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence            0                  00111110                         122222222221111             


Q ss_pred             -----HHHH---------------------HHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy2748         436 -----KATK---------------------SKLSQKFQ---------SKMQAQAETYESKLRHNEKKVIRKVKNLIDSQL  480 (690)
Q Consensus       436 -----~~~k---------------------~~le~~~~---------~kl~~~~ek~e~kl~~~eek~L~qlk~il~~~~  480 (690)
                           ..+.                     .+.+++..         ..+++...++.++||.++|+ |+++.+||+-. 
T Consensus       575 E~~~~~~~i~~l~~el~eq~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~~~~~l~~~~e~-l~~~~~~i~~~-  652 (809)
T KOG0247|consen  575 ESTEYEEEIEALDQELEEQKMELQQKFSEKKKAMAKVRGILANTSPECSVAAKLLELQSKLWFKDEK-LKHLTAIIQTP-  652 (809)
T ss_pred             hcchhhhhhHHHHHHHHhhhHHHHhhccchhHHHhhhccccCCCchhhhHHHHHHHHHHHhcccHHH-HHHhhcccCCC-
Confidence                 0000                     00000110         12333333344889999999 99999999762 


Q ss_pred             CCCCCCC----CCCCCCCCCCCCCCcccccccCccccCCCCCCccCCCccccccCCCCCCCCccccccCCCCCCCCCCcc
Q psy2748         481 PDTSSLS----SCSSGSAPPIPTPRTITSDYNTRTTRSGKAGDVQSTPNVTARRNAPAPPRSTRRRSRSAGPPTNPAGTW  556 (690)
Q Consensus       481 ~~~p~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~rrs~sa~~~~~~~~~w  556 (690)
                       .+|-..    ...++... ..++++...        +.-+.+..-.|    ++ ++|+++.|||||+|||      ++|
T Consensus       653 -p~p~~~~~~~~~~e~d~~-~~t~rt~~~--------~~~~~S~~~~~----~~-~~~~~~~rqrrs~sa~------~~~  711 (809)
T KOG0247|consen  653 -PPPYQTPGRNPLFEKDRE-ATTSRTVMS--------SSVPQSLEFQP----GH-NAPAYRLRQRRSRSAG------DRL  711 (809)
T ss_pred             -CCCcCCcccccccccchh-hhhhhhhhc--------CCCchhhhhcc----cc-ccchhhhHhhhccccc------cch
Confidence             222111    11111111 011011000        00011222233    24 7899999999999998      999


Q ss_pred             ccccCCCCcCCCCCCcccccCCCC-CceeeeccCCccccccccccceeeeeeccCCCCceeeEEEeeccCCCCeeecCCC
Q psy2748         557 LHHTPGQVLLNTPHGTVFQPTGWK-KRKSVTALTDVKDIVDPKLAKYSLMTQEPNTDGEMETHLFKVNYLDGDVLPTVGG  635 (690)
Q Consensus       557 ~~h~p~~~~~~~~~~tv~qp~~~~-~~~~v~~~~~~k~~~~~k~~~y~l~~qe~~~~ge~eTkl~K~~~~~gdv~~t~gg  635 (690)
                      +||+|.+.   ||+||||||+ .+ +++.+..++. +.|  +|+.+|||+|||+|+||+|+|||||     |+||||+||
T Consensus       712 ~~h~~~~~---vq~~tv~q~~-~~~~~i~~~~~~~-~~L--~~~~kyrl~~q~~~~~g~~~tk~~k-----gn~lpt~~g  779 (809)
T KOG0247|consen  712 LDHQPLHR---VQTGTVLQPR-VPANAIRTQKPEM-KKL--NKSGKYRLTHQEVDQDGNIETKIVK-----GNVLPTVGG  779 (809)
T ss_pred             hcccchhh---ccccceeccc-cchhhhhhhhHHH-HHH--hhccceecccccccccCcccccccc-----CcccccCCC
Confidence            99999999   9999999999 66 5555555555 999  8999999999999999999999999     999999999


Q ss_pred             CeeEEecccccccccCCC
Q psy2748         636 GAQVVFNELETLRQTSPL  653 (690)
Q Consensus       636 g~~v~f~d~e~Lkq~sp~  653 (690)
                      |++|+|+|||+|+|+||.
T Consensus       780 gs~v~f~d~e~l~~~sp~  797 (809)
T KOG0247|consen  780 GSSVDFLDIERLKQESPS  797 (809)
T ss_pred             ccceecccHHHHhcCCCC
Confidence            999999999999999998

>KOG0243|consensus Back     alignment and domain information
>KOG0245|consensus Back     alignment and domain information
>KOG4280|consensus Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>KOG0241|consensus Back     alignment and domain information
>KOG0240|consensus Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>KOG0242|consensus Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>KOG0239|consensus Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>KOG0246|consensus Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0244|consensus Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query690
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 2e-19
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 7e-17
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 1e-16
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 3e-16
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 3e-16
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 4e-16
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 2e-15
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 3e-15
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 7e-15
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 6e-13
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 7e-13
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 2e-12
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 3e-12
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 3e-12
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 6e-12
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 7e-12
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 9e-12
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 1e-11
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 1e-11
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 3e-04
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 2e-11
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 8e-11
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 1e-10
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 1e-10
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 1e-10
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 2e-10
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 2e-10
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 2e-10
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 2e-10
4a1z_A368 Eg5-1 Length = 368 2e-10
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 2e-10
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 2e-10
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 2e-10
4a28_A368 Eg5-2 Length = 368 3e-10
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 9e-10
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 1e-09
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 1e-09
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 1e-09
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 3e-09
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 3e-09
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 4e-09
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 4e-09
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 1e-08
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 1e-07
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 1e-07
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 2e-07
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 2e-07
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 4e-07
2kin_A238 Kinesin (Monomeric) From Rattus Norvegicus Length = 6e-07
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 7e-07
3vhx_B120 The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesi 2e-06
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 7e-05
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 9e-05
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 9e-05
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 8e-04
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure 
Iteration: 1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 30/354 (8%)
Query: 20  GSSDPLQVFCRIRPMDNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQ-YVFKKIFN 78
           GSS+ ++V  R RPM+     +    V D  V+L      NP+   ++  + + F  +++
Sbjct: 18  GSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYD 77
Query: 79  VDVGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSD---GGIMMRCID 135
            +  Q ++Y E   PLV +++   NG +  YG TG+GKTYTM G   D    G++    D
Sbjct: 78  WNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFD 137
Query: 136 VLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDP 195
            +F  I R Q ++   R   L  +  Q ++  LL +      EL +R P  G+       
Sbjct: 138 HIFTHISRSQNQQYLVRASYLEIY--QEEIRDLLSKDQTKRLELKER-PDTGVYVKDLSS 194
Query: 196 EMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIRED 255
            +   +K+   V ++   N  SV  + +  +++  H +           I +    +  D
Sbjct: 195 FVTKSVKEIEHVMNVGNQN-RSVGATNMNEHSSRSHAIFV---------ITIECSEVGLD 244
Query: 256 GDKNMFVHGVNEIEVTTPD---------EAFQSIGNINNSLMTLRTCLEILRENQLQGTN 306
           G+ ++ V  +N +++   +         E  +    IN SL  L   +  L    + G +
Sbjct: 245 GENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISAL----VDGKS 300
Query: 307 KIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEVQ 360
              P+R+SKLT L +    G+    M+  V P   + +E L  +++A  ++ ++
Sbjct: 301 THIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIK 354
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|3VHX|B Chain B, The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesin-Like Protein 1) Complex Length = 120 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query690
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 1e-30
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 1e-29
3u06_A412 Protein claret segregational; motor domain, stalk 6e-29
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 1e-28
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 3e-28
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 3e-27
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 1e-26
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 2e-26
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 3e-24
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 1e-10
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 9e-05
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 7e-24
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 6e-11
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 2e-05
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 4e-23
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 2e-22
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 5e-11
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 1e-04
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 3e-22
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 7e-22
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 2e-10
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 3e-04
3vhx_B120 Kinesin-like protein KIF23; small GTPase, GTP bind 7e-22
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 6e-21
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 2e-10
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 2e-05
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 6e-21
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 5e-12
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-05
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 7e-21
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 8e-12
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 1e-20
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 2e-11
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 2e-04
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-20
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-09
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 2e-20
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 4e-10
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 4e-05
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 3e-20
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 9e-11
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 7e-04
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 6e-20
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 8e-09
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 8e-20
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 6e-06
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 9e-20
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 4e-10
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 6e-05
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 3e-19
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 6e-10
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 9e-19
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 2e-08
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 2e-06
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
 Score =  122 bits (308), Expect = 1e-30
 Identities = 84/378 (22%), Positives = 137/378 (36%), Gaps = 96/378 (25%)

Query: 26  QVFCRIRPM-----DNSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVD 80
           +V  R+RP+     +     + ++  +D    +       P  F          K+F+  
Sbjct: 7   RVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFE-------LDKVFSPQ 59

Query: 81  VGQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNS 140
             Q+ V+ EV   LV + I   N  +  YG TG+GKTYTM GT  + GI  R + +LF+ 
Sbjct: 60  ASQQDVFQEVQ-ALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSE 118

Query: 141 IGRYQPRKRTFRPDKLNGFEVQ-SQVDI-------LLQEQAEMNGELTKRTPGPGLKRNK 192
           +   Q +   +       + +  S  +I       LL ++ +   E+          R  
Sbjct: 119 V---QEKASDWE------YTITVSAAEIYNEVLRDLLGKEPQEKLEI----------RLC 159

Query: 193 SDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARI----QLN 248
            D   +  +   +                  E    SV D+ +    G+  R      LN
Sbjct: 160 PDGSGQLYVPGLT------------------EFQVQSVDDINKVFEFGHTNRTTEFTNLN 201

Query: 249 NR-----------LIREDGDKNMFVHG------------VNEIEVT--TPDEAFQSIGNI 283
                        +   D    +   G            V +         EA     +I
Sbjct: 202 EHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREA----QHI 257

Query: 284 NNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDY 343
           N SL  L   +  LR  Q      + PFR SKLT+L +   +GD    M+V V+P  ++ 
Sbjct: 258 NKSLSALGDVIAALRSRQ----GHV-PFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNT 312

Query: 344 DENLAVMKFAEMSQEVQI 361
            E L  +KFAE  + V++
Sbjct: 313 SETLYSLKFAERVRSVEL 330
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>3vhx_B Kinesin-like protein KIF23; small GTPase, GTP binding, flemming BODY, cytokinesis, cell signaling protein complex; HET: GTP; 2.81A {Homo sapiens} Length = 120 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query690
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 100.0
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 100.0
3nwn_A359 Kinesin-like protein KIF9; motor domain, ADP, stru 100.0
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 100.0
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 100.0
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 100.0
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 100.0
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 100.0
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 100.0
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 100.0
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 100.0
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 100.0
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 100.0
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 100.0
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 100.0
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 100.0
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 100.0
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 100.0
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 100.0
3u06_A412 Protein claret segregational; motor domain, stalk 100.0
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 100.0
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 100.0
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 100.0
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 100.0
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 100.0
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 100.0
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 100.0
4h1g_A715 Maltose binding protein-cakar3 motor domain fusio; 100.0
3vhx_B120 Kinesin-like protein KIF23; small GTPase, GTP bind 100.0
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 99.94
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 99.93
2o0a_A298 S.cerevisiae chromosome XVI reading frame ORF YPL2 99.91
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 92.43
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 89.9
2qgz_A308 Helicase loader, putative primosome component; str 88.42
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 83.09
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 82.37
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 80.7
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 80.58
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 80.14
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=9.8e-69  Score=582.22  Aligned_cols=270  Identities=25%  Similarity=0.437  Sum_probs=216.2

Q ss_pred             CCCCCCCEEEEEEecCCCCCCC----CceEEEecCcEEEEcCCCCCCCCcCCCcceEEEecEEeCCCCChHHHHHHhhHH
Q psy2748          18 NNGSSDPLQVFCRIRPMDNSYD----ESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHP   93 (690)
Q Consensus        18 ~~~~~~~V~V~~RvRP~~~~e~----~~~i~v~~~~tv~l~~p~~~~~r~~~~~~~~f~Fd~VF~~~asQ~evF~~v~~p   93 (690)
                      .....++|+|+|||||+...|.    ..|+...++.++.+..+..      ......|+||+||+++++|++||+.++.|
T Consensus        16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~------~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~p   89 (388)
T 3bfn_A           16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRN------HQETLKYQFDAFYGERSTQQDIYAGSVQP   89 (388)
T ss_dssp             SSSCCCCCEEEEEECCCC-----------------------------------CEEEEECSEEECTTCCHHHHHHHHTGG
T ss_pred             ccCCCCCEEEEEECCCCChhhhccCCCceEEecCCCeEEEecCCC------CCCeeEEEcceEecCCCCHhHHHHHHHHH
Confidence            3567899999999999987653    4588777777777765433      13467899999999999999999999999


Q ss_pred             HHHHHhccCCeEEEEecccCCCCeeecCCCCCCCChHHHHHHHHHHHhcccCCCCccccCCCCCcceehhHHHHHHHHHH
Q psy2748          94 LVANLIHAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQA  173 (690)
Q Consensus        94 lV~~~l~G~N~~IfaYGqTGSGKTyTm~G~~~~~GIiPR~l~~LF~~i~~~~~~~~~~~p~~~~~~~i~~e~~~ll~~~~  173 (690)
                      +|+++++|||+||||||||||||||||+|++.++|||||++++||+.+.....                           
T Consensus        90 lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~---------------------------  142 (388)
T 3bfn_A           90 ILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGA---------------------------  142 (388)
T ss_dssp             GHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTS---------------------------
T ss_pred             HHHHhhcCceeeEeeecCCCCCCCeEeecCccccchhHHHHHHHHHHHHHhhc---------------------------
Confidence            99999999999999999999999999999999999999999999998865211                           


Q ss_pred             HhhcccccCCCCCCCccCCCCCCCccccccccccccccCCceEEEEEEEEEEEccceeecccCCCCCCccccccccceEe
Q psy2748         174 EMNGELTKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIR  253 (690)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sV~vSyiEIYNe~v~DLL~~~~~~~~~~~~~~~~~ir  253 (690)
                                                          .+....|.|++||+|||||.|||||.+..         ..+.++
T Consensus       143 ------------------------------------~~~~~~~~V~vS~lEIYnE~i~DLL~~~~---------~~l~ir  177 (388)
T 3bfn_A          143 ------------------------------------EGRPWALSVTMSYLEIYQEKVLDLLDPAS---------GDLVIR  177 (388)
T ss_dssp             ------------------------------------TTCSEEEEEEEEEEEEETTEEEESSSCSS---------CBCCCE
T ss_pred             ------------------------------------cCCCceEEEEEEEEEEECCeeeehhccCC---------CCceEE
Confidence                                                02345799999999999999999998654         346789


Q ss_pred             ecCCCCeEEeeeEEEEecCchhhhhh------------------------------------------------------
Q psy2748         254 EDGDKNMFVHGVNEIEVTTPDEAFQS------------------------------------------------------  279 (690)
Q Consensus       254 ed~~~~~~V~gl~~v~V~s~eea~~~------------------------------------------------------  279 (690)
                      ||..++++|.|++++.|.+.+|++.+                                                      
T Consensus       178 ed~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLAGS  257 (388)
T 3bfn_A          178 EDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGS  257 (388)
T ss_dssp             ECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECCCT
T ss_pred             EcCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECCCC
Confidence            99999999999999999999999876                                                      


Q ss_pred             ---------------ccccccccchHHHHHHHHhhhcccCCCCCCCCCCchhhhcccccCCCCceeEEEEEeCCCCCCHH
Q psy2748         280 ---------------IGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYD  344 (690)
Q Consensus       280 ---------------a~~IN~SL~aL~~cI~aL~~~q~~g~~~~VPYRdSKLT~LLkdsLgGnskt~mIvcVsP~~~~~~  344 (690)
                                     +++||+||++||+||.+|.+++     .||||||||||+||||+||||++|+||+||+|+..+++
T Consensus       258 Er~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~-----~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~  332 (388)
T 3bfn_A          258 EDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGL-----PRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYL  332 (388)
T ss_dssp             TC--------------CCCCHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHH
T ss_pred             cccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCC-----CCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHH
Confidence                           5789999999999999998864     69999999999999999999999999999999999999


Q ss_pred             HHhhHHHHHhhhhceeeccCCCCcCC
Q psy2748         345 ENLAVMKFAEMSQEVQISKALPSRLD  370 (690)
Q Consensus       345 ETl~TLrFA~rak~I~~~~~v~~~~~  370 (690)
                      ||++||+||+||++|+|.|.+|...+
T Consensus       333 ETlsTLrfA~rak~I~n~p~~n~~~~  358 (388)
T 3bfn_A          333 DTVSALNFAARSKEVINRPFTNESLQ  358 (388)
T ss_dssp             HHHHHHHHHCSEEEEC----------
T ss_pred             HHHHHHHHHHHHhhCcCcCcccCCCC
Confidence            99999999999999999999987654
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Back     alignment and structure
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Back     alignment and structure
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} Back     alignment and structure
>3vhx_B Kinesin-like protein KIF23; small GTPase, GTP binding, flemming BODY, cytokinesis, cell signaling protein complex; HET: GTP; 2.81A {Homo sapiens} Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Back     alignment and structure
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 690
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 1e-33
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 1e-33
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 2e-33
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 1e-32
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 2e-32
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 4e-32
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 1e-31
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 5e-30
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 8e-27
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 1e-33
 Identities = 65/341 (19%), Positives = 128/341 (37%), Gaps = 32/341 (9%)

Query: 26  QVFCRIRPMD----NSYDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDV 81
           +V CR RP++    N  D+       + TV +                 Y F ++F    
Sbjct: 8   KVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIASK-------------PYAFDRVFQSST 54

Query: 82  GQKQVYSEVAHPLVANLIHAKNGLLLTYGVTGSGKTYTMNGTNS---DGGIMMRCIDVLF 138
            Q+QVY++ A  +V +++   NG +  YG T SGKT+TM G        GI+ R +  +F
Sbjct: 55  SQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIF 114

Query: 139 NSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGELTKRTPGPGLKRNKSDPEME 198
           N I             K++ FE+       L + ++ N  + +        +  ++  + 
Sbjct: 115 NYIYSMDENLEFHI--KVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVC 172

Query: 199 PRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDK 258
              +    +++ + +   +V         +    L+    E      +L+ +L   D   
Sbjct: 173 SPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVD--- 229

Query: 259 NMFVHGVNEIEVTTPDEAFQSIGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTH 318
                     +            NIN SL  L   +  L E          P+R+SK+T 
Sbjct: 230 --LAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGS-----TYVPYRDSKMTR 282

Query: 319 LFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMKFAEMSQEV 359
           + +    G+    +++C +P   +  E  + + F + ++ +
Sbjct: 283 ILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 323
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query690
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 100.0
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 100.0
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 100.0
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 100.0
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 100.0
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 100.0
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 100.0
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 100.0
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 91.39
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 87.16
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 87.14
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 84.92
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 84.49
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 80.41
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=100.00  E-value=5e-63  Score=535.16  Aligned_cols=259  Identities=25%  Similarity=0.408  Sum_probs=231.1

Q ss_pred             CEEEEEEecCCCCC----CCCceEEEecCcEEEEcCCCCCCCCcCCCcceEEEecEEeCCCCChHHHHHHhhHHHHHHHh
Q psy2748          24 PLQVFCRIRPMDNS----YDESCISVVSDTTVQLTPPDGSNPRYFNNKEVQYVFKKIFNVDVGQKQVYSEVAHPLVANLI   99 (690)
Q Consensus        24 ~V~V~~RvRP~~~~----e~~~~i~v~~~~tv~l~~p~~~~~r~~~~~~~~f~Fd~VF~~~asQ~evF~~v~~plV~~~l   99 (690)
                      .|+|||||||+...    ....|+.+.++.++.......        ..+.|+||+||+++++|++||+.+ .|+|++++
T Consensus         1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~f~FD~vf~~~~~q~~vy~~v-~~lv~~~l   71 (364)
T d1sdma_           1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDD--------KAKQHMYDRVFDGNATQDDVFEDT-KYLVQSAV   71 (364)
T ss_dssp             CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSS--------SEEEEECSEEECTTCCHHHHHHTT-THHHHHHH
T ss_pred             CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCCC--------CceEEECCeecCCCCCHHHHHHHH-HHHHHHHh
Confidence            48999999998754    245678887877776654332        467899999999999999999986 79999999


Q ss_pred             ccCCeEEEEecccCCCCeeecCCCCCCCChHHHHHHHHHHHhcccCCCCccccCCCCCcceehhHHHHHHHHHHHhhccc
Q psy2748         100 HAKNGLLLTYGVTGSGKTYTMNGTNSDGGIMMRCIDVLFNSIGRYQPRKRTFRPDKLNGFEVQSQVDILLQEQAEMNGEL  179 (690)
Q Consensus       100 ~G~N~~IfaYGqTGSGKTyTm~G~~~~~GIiPR~l~~LF~~i~~~~~~~~~~~p~~~~~~~i~~e~~~ll~~~~~~~~~~  179 (690)
                      +|||+||||||||||||||||+|+..++|||||++++||+.+...                                   
T Consensus        72 ~G~n~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~-----------------------------------  116 (364)
T d1sdma_          72 DGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKD-----------------------------------  116 (364)
T ss_dssp             TTCEEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHG-----------------------------------
T ss_pred             cCCceeeeccccCCCCcccccccCccccchhHHHHHHHHhhhhhc-----------------------------------
Confidence            999999999999999999999999999999999999999988762                                   


Q ss_pred             ccCCCCCCCccCCCCCCCccccccccccccccCCceEEEEEEEEEEEccceeecccCCCCCCccccccccceEeecCCCC
Q psy2748         180 TKRTPGPGLKRNKSDPEMEPRIKDASKVEDIEEDNVYSVFVSYIEIYNNSVHDLLEDMPEGNNARIQLNNRLIREDGDKN  259 (690)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sV~vSyiEIYNe~v~DLL~~~~~~~~~~~~~~~~~ired~~~~  259 (690)
                                                     ..+..|.|++||+|||||.|||||.+....      ...+.+++|+.++
T Consensus       117 -------------------------------~~~~~~~v~~S~~EIyne~i~DLL~~~~~~------~~~l~~~~~~~~~  159 (364)
T d1sdma_         117 -------------------------------SNKFSFSLKAYMVELYQDTLVDLLLPKQAK------RLKLDIKKDSKGM  159 (364)
T ss_dssp             -------------------------------GGTEEEEEEEEEEEESSSCEEETTSCTTSC------CCCCEEEECTTSC
T ss_pred             -------------------------------cccccceEEEEEEEEeccccccccCccccc------ccccceeecccCc
Confidence                                           134569999999999999999999876531      2345789999999


Q ss_pred             eEEeeeEEEEecCchhhhhh------------------------------------------------------------
Q psy2748         260 MFVHGVNEIEVTTPDEAFQS------------------------------------------------------------  279 (690)
Q Consensus       260 ~~V~gl~~v~V~s~eea~~~------------------------------------------------------------  279 (690)
                      ++|.|++++.|.+.+|++.+                                                            
T Consensus       160 ~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~~~~~  239 (364)
T d1sdma_         160 VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSG  239 (364)
T ss_dssp             EEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCCCC--
T ss_pred             cccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCcceeeeEEEEeechhhcccccccc
Confidence            99999999999999999876                                                            


Q ss_pred             --------ccccccccchHHHHHHHHhhhcccCCCCCCCCCCchhhhcccccCCCCceeEEEEEeCCCCCCHHHHhhHHH
Q psy2748         280 --------IGNINNSLMTLRTCLEILRENQLQGTNKIPPFRESKLTHLFKSYFTGDGDVRMIVCVNPRVEDYDENLAVMK  351 (690)
Q Consensus       280 --------a~~IN~SL~aL~~cI~aL~~~q~~g~~~~VPYRdSKLT~LLkdsLgGnskt~mIvcVsP~~~~~~ETl~TLr  351 (690)
                              +.+||+||++|++||.+|++++     .||||||||||+||+|+||||++|+||+||||+..+|+||++||+
T Consensus       240 ~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~-----~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~  314 (364)
T d1sdma_         240 SAGNQLKEAQSINKSLSALGDVISALSSGN-----QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLT  314 (364)
T ss_dssp             -------CCCTTCHHHHHHHHHHHHHHHTC-----SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred             ccCceeeeccccccchhhHHHHHHHHHcCC-----CcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHHHHHHH
Confidence                    5789999999999999999865     799999999999999999999999999999999999999999999


Q ss_pred             HHhhhhceeeccCCCCc
Q psy2748         352 FAEMSQEVQISKALPSR  368 (690)
Q Consensus       352 FA~rak~I~~~~~v~~~  368 (690)
                      ||++|++|++.|.+|..
T Consensus       315 fa~~ak~i~n~p~~n~~  331 (364)
T d1sdma_         315 YASRVRSIVNDPSKNVS  331 (364)
T ss_dssp             HHHHHTTCCCCCCCCEE
T ss_pred             HHHHHhhcccCCcccCC
Confidence            99999999999887753
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure