Psyllid ID: psy2758


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--
MCGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW
ccccccccccccccccHHHHHHHHHHHHHHHHEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccccc
cccccEcccccccccHHHHHHHHHHHHHHHEEEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccccc
mcgicrfgdafwnsskySMTHYLYMMMTSWAIVAdvwylppmfqgqgeNAVEFASRVKRAIskqgglvdlmw
mcgicrfgdafwnSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRaiskqgglvdlmw
MCGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW
*CGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRV***************
**GICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQG***NAVEFASRVKRAISKQGGLVDLMW
MCGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW
*CGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MCGICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query72 2.2.26 [Sep-21-2011]
Q8K2C8456 Glycerol-3-phosphate acyl yes N/A 0.930 0.146 0.701 1e-23
Q6DG38449 Glycerol-3-phosphate acyl yes N/A 0.930 0.149 0.716 5e-23
Q53EU6434 Glycerol-3-phosphate acyl yes N/A 0.930 0.154 0.686 7e-23
A3KGT9443 Glycerol-3-phosphate acyl no N/A 0.930 0.151 0.701 1e-22
Q5R6J7456 Glycerol-3-phosphate acyl no N/A 0.930 0.146 0.701 3e-22
Q86UL3456 Glycerol-3-phosphate acyl no N/A 0.930 0.146 0.701 3e-22
Q4V8J4457 Glycerol-3-phosphate acyl no N/A 0.930 0.146 0.656 3e-22
A3FPG8456 Glycerol-3-phosphate acyl no N/A 0.930 0.146 0.701 3e-22
Q8C0N2438 Glycerol-3-phosphate acyl no N/A 0.930 0.152 0.656 4e-22
Q5ZLL8446 Glycerol-3-phosphate acyl no N/A 0.930 0.150 0.626 2e-21
>sp|Q8K2C8|GPAT4_MOUSE Glycerol-3-phosphate acyltransferase 4 OS=Mus musculus GN=Agpat6 PE=2 SV=1 Back     alignment and function desciption
 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/67 (70%), Positives = 56/67 (83%)

Query: 6   RFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQG 65
           +FGDAFWNSSKY M  YL  MMTSWAIV  VWYLPPM + + E+AV+FA+RVK AI++QG
Sbjct: 355 QFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREKDEDAVQFANRVKSAIARQG 414

Query: 66  GLVDLMW 72
           GLVDL+W
Sbjct: 415 GLVDLLW 421




Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Active against both saturated and unsaturated long-chain fatty acyl-CoAs.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 5
>sp|Q6DG38|GPAT3_DANRE Glycerol-3-phosphate acyltransferase 3 OS=Danio rerio GN=agpat9 PE=2 SV=1 Back     alignment and function description
>sp|Q53EU6|GPAT3_HUMAN Glycerol-3-phosphate acyltransferase 3 OS=Homo sapiens GN=AGPAT9 PE=1 SV=2 Back     alignment and function description
>sp|A3KGT9|GPT3L_DANRE Glycerol-3-phosphate acyltransferase 3-like OS=Danio rerio GN=agpat9l PE=3 SV=1 Back     alignment and function description
>sp|Q5R6J7|GPAT4_PONAB Glycerol-3-phosphate acyltransferase 4 OS=Pongo abelii GN=AGPAT6 PE=2 SV=2 Back     alignment and function description
>sp|Q86UL3|GPAT4_HUMAN Glycerol-3-phosphate acyltransferase 4 OS=Homo sapiens GN=AGPAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q4V8J4|GPAT3_RAT Glycerol-3-phosphate acyltransferase 3 OS=Rattus norvegicus GN=Agpat9 PE=2 SV=1 Back     alignment and function description
>sp|A3FPG8|GPAT4_BOVIN Glycerol-3-phosphate acyltransferase 4 OS=Bos taurus GN=AGPAT6 PE=3 SV=1 Back     alignment and function description
>sp|Q8C0N2|GPAT3_MOUSE Glycerol-3-phosphate acyltransferase 3 OS=Mus musculus GN=Agpat9 PE=1 SV=1 Back     alignment and function description
>sp|Q5ZLL8|GPAT3_CHICK Glycerol-3-phosphate acyltransferase 3 OS=Gallus gallus GN=AGPAT9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query72
195122670 538 GI18864 [Drosophila mojavensis] gi|19391 0.930 0.124 0.776 1e-26
270002450 611 hypothetical protein TcasGA2_TC004512 [T 0.930 0.109 0.791 1e-26
195382563 537 GJ20434 [Drosophila virilis] gi|19414479 0.930 0.124 0.776 2e-26
312373292 920 hypothetical protein AND_17626 [Anophele 0.930 0.072 0.731 2e-26
195028430 537 GH21717 [Drosophila grimshawi] gi|193903 0.930 0.124 0.776 3e-26
189234177 558 PREDICTED: similar to CG3209 CG3209-PA [ 0.930 0.120 0.791 3e-26
194886077 537 GG22933 [Drosophila erecta] gi|190659732 0.930 0.124 0.746 3e-26
195430862 536 GK21924 [Drosophila willistoni] gi|19415 0.930 0.125 0.761 3e-26
281364169 459 CG3209, isoform C [Drosophila melanogast 0.930 0.145 0.746 5e-26
242017203 577 conserved hypothetical protein [Pediculu 0.930 0.116 0.791 6e-26
>gi|195122670|ref|XP_002005834.1| GI18864 [Drosophila mojavensis] gi|193910902|gb|EDW09769.1| GI18864 [Drosophila mojavensis] Back     alignment and taxonomy information
 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/67 (77%), Positives = 61/67 (91%)

Query: 6   RFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQG 65
           RFGDAFWNSSKYSM  YLYMMMTSWAIV DVWYLPPM++ +GE+A++FA+RVK  I+KQG
Sbjct: 444 RFGDAFWNSSKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAIDFANRVKGVIAKQG 503

Query: 66  GLVDLMW 72
           GLVDL+W
Sbjct: 504 GLVDLVW 510




Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002450|gb|EEZ98897.1| hypothetical protein TcasGA2_TC004512 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195382563|ref|XP_002049999.1| GJ20434 [Drosophila virilis] gi|194144796|gb|EDW61192.1| GJ20434 [Drosophila virilis] Back     alignment and taxonomy information
>gi|312373292|gb|EFR21057.1| hypothetical protein AND_17626 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|195028430|ref|XP_001987079.1| GH21717 [Drosophila grimshawi] gi|193903079|gb|EDW01946.1| GH21717 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|189234177|ref|XP_969094.2| PREDICTED: similar to CG3209 CG3209-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|194886077|ref|XP_001976545.1| GG22933 [Drosophila erecta] gi|190659732|gb|EDV56945.1| GG22933 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195430862|ref|XP_002063467.1| GK21924 [Drosophila willistoni] gi|194159552|gb|EDW74453.1| GK21924 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|281364169|ref|NP_611880.3| CG3209, isoform C [Drosophila melanogaster] gi|224809687|gb|ACN63495.1| RE02778p [Drosophila melanogaster] gi|272432678|gb|AAF47157.2| CG3209, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|242017203|ref|XP_002429081.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513945|gb|EEB16343.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query72
FB|FBgn0034971459 CG3209 [Drosophila melanogaste 0.930 0.145 0.746 5.4e-26
ZFIN|ZDB-GENE-040718-436449 agpat9 "1-acylglycerol-3-phosp 0.930 0.149 0.716 1.6e-22
RGD|1310520379 Agpat6 "1-acylglycerol-3-phosp 0.930 0.176 0.701 2.1e-22
ZFIN|ZDB-GENE-060531-19443 agpat9l "1-acylglycerol-3-phos 0.930 0.151 0.701 4.3e-22
UNIPROTKB|F6X4Q8410 AGPAT6 "Uncharacterized protei 0.930 0.163 0.701 4.6e-22
MGI|MGI:2142716456 Agpat6 "1-acylglycerol-3-phosp 0.930 0.146 0.701 5e-22
UNIPROTKB|Q0ZFS7456 Agpat6 "1-acylglycerol-3-phosp 0.930 0.146 0.701 6.4e-22
UNIPROTKB|E2RRI3433 AGPAT9 "Uncharacterized protei 0.930 0.154 0.686 6.4e-22
UNIPROTKB|Q86UL3456 AGPAT6 "Glycerol-3-phosphate a 0.930 0.146 0.701 8.2e-22
UNIPROTKB|Q5R6J7456 AGPAT6 "Glycerol-3-phosphate a 0.930 0.146 0.701 8.2e-22
FB|FBgn0034971 CG3209 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 296 (109.3 bits), Expect = 5.4e-26, P = 5.4e-26
 Identities = 50/67 (74%), Positives = 61/67 (91%)

Query:     6 RFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQG 65
             RFGDAFWNS+KYSM  YLYMMMTSWAIV DVWYLPPM++ +GE+A++FA+RVK  I+KQG
Sbjct:   363 RFGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAIDFANRVKSVIAKQG 422

Query:    66 GLVDLMW 72
             GL+DL+W
Sbjct:   423 GLIDLVW 429




GO:0003841 "1-acylglycerol-3-phosphate O-acyltransferase activity" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
ZFIN|ZDB-GENE-040718-436 agpat9 "1-acylglycerol-3-phosphate O-acyltransferase 9" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1310520 Agpat6 "1-acylglycerol-3-phosphate O-acyltransferase 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060531-19 agpat9l "1-acylglycerol-3-phosphate O-acyltransferase 9, like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F6X4Q8 AGPAT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2142716 Agpat6 "1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0ZFS7 Agpat6 "1-acylglycerol-3-phosphate O-acyltransferase 6 (Lysophosphatidic acid acyltransferase, zeta)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RRI3 AGPAT9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q86UL3 AGPAT6 "Glycerol-3-phosphate acyltransferase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6J7 AGPAT6 "Glycerol-3-phosphate acyltransferase 4" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q53EU6GPAT3_HUMAN2, ., 3, ., 1, ., 1, 50.68650.93050.1543yesN/A
Q8K2C8GPAT4_MOUSE2, ., 3, ., 1, ., 1, 50.70140.93050.1469yesN/A
Q6DG38GPAT3_DANRE2, ., 3, ., 1, ., 1, 50.71640.93050.1492yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query72
cd07991211 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt 8e-25
PLN02833376 PLN02833, PLN02833, glycerol acyltransferase famil 5e-21
>gnl|CDD|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
 Score = 91.1 bits (227), Expect = 8e-25
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 5   CRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQ-GENAVEFASRVKRAISK 63
            +F DAFWNSS YS   YL+ ++T  A V +V +LP     + GE+  EFA+RV+  ++ 
Sbjct: 137 NKFVDAFWNSSGYSSLMYLFRLLTQPANVLEVEFLPVYTPSEEGEDPKEFANRVRLIMAN 196

Query: 64  QGGLVDLMW 72
           + GL    W
Sbjct: 197 KLGLPATDW 205


Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211

>gnl|CDD|215447 PLN02833, PLN02833, glycerol acyltransferase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 72
KOG2898|consensus354 99.88
PLN02833376 glycerol acyltransferase family protein 99.82
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 99.22
PLN02499498 glycerol-3-phosphate acyltransferase 98.07
PLN02588525 glycerol-3-phosphate acyltransferase 97.95
PLN02177497 glycerol-3-phosphate acyltransferase 97.93
KOG4666|consensus 412 84.51
>KOG2898|consensus Back     alignment and domain information
Probab=99.88  E-value=4.3e-23  Score=158.21  Aligned_cols=69  Identities=59%  Similarity=1.058  Sum_probs=67.5

Q ss_pred             ccccccccccCCChhHHHHHHHHhhcceeEEEEEEeCCccCCCCCCHHHHHHHHHHHHHhhCCCccCCC
Q psy2758           4 ICRFGDAFWNSSKYSMTHYLYMMMTSWAIVADVWYLPPMFQGQGENAVEFASRVKRAISKQGGLVDLMW   72 (72)
Q Consensus         4 ~~~fgD~fWns~~~s~~~yl~~lMTsW~~V~dV~yLpp~~r~~~E~~~eFA~RVk~~IA~~~gl~~l~W   72 (72)
                      .++|||+||||+++||.+|++++||||++|||||||||++|.++||+.+||+|||.+||+++|++++.|
T Consensus       251 ~~~~~~~f~~s~~~s~~~~l~~~~ts~~~v~~i~~l~~~~r~~~et~t~~a~~v~~~ig~~~gl~~~~~  319 (354)
T KOG2898|consen  251 DPRFGDAFWNSPELSFTRYLLELMTSWAIVCDIWYLPPMRRDNDETATQFANRVKSLIGKSAGLKDLEW  319 (354)
T ss_pred             CccccccccCCccccHHHHHHHHHhhhheeeeeeecccEEeecccchhHHHHHHHHHHHHhhCCcccCc
Confidence            478999999999999999999999999999999999999999999999999999999999999999987



>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>PLN02499 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02588 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>KOG4666|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00