Psyllid ID: psy2839

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MSRTLPPIRYTYVPTLFYHFFHYDEGEDSNRSHGGEDSNRSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Secondary Structure (PSIPRED)
cccccccccEEcccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEEHHHHHHHHHHEEEEEEEEEcEEEc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHEEEEEccccccccHHHHHHHHHHHHHHHHHcccEEEEc
Coil and Loop (DISEMBL)
msrtlppirytyvptlfyhffhydegedsnrshggedsnrshggedsnrshvgedsnrswtsvpvwptsqtekphgevkkdplfppdpftmeqkrNGAVILHILGVLYMFVALAVVcdeffvpsLDVIIDRLQVQEDVAGATfmaaggsapelFTSVIGVFvsfddvgiaggsapeLFTSVIGVFvsfddvgivvv
Flexible Loop (DISEMBL)
msrtlppirytYVPTLFYHFFHYDEGEDSNRSHGGEDSnrshggedsnrshvgedsnrswtsvpvwptsqtekphgevkkDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFddvgivvv
Low Complexity Region (SEG)
MSRTLPPIRYTYVPTLFYHFFHYDEGEDSNRSHGGEDSNRSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Disordered region (IsUnstruct)
******PIRYTYVPTLFYHFFHYD***********************************************************************NGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVV*
Disordered Region (DISOPRED)
********RYTYVPTLFYHFFHYDE*****************************************************KKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Disordered Region (DISEMBL)
MSRTLPPIRYTYVPTLFYHFFHYDEG***********************************SVPVW************KKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Disordered Region (DISPRO)
***TLPPIRYTYVPTLFYHFFHYDE********************************************************PLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRTLPPIRYTYVPTLFYHFFHYDEGEDSNRSHGGEDSNRSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAGGSAPELFTSVIGVFVSFDDVGIVVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q9U6A0	881	Sodium/potassium/calcium	yes	N/A	0.602	0.133	0.691	1e-37
O60721	1099	Sodium/potassium/calcium	yes	N/A	0.459	0.081	0.645	2e-31
Q9IAL7	651	Sodium/potassium/calcium	yes	N/A	0.540	0.162	0.611	4e-31
O54701	670	Sodium/potassium/calcium	yes	N/A	0.816	0.238	0.461	4e-31
Q9QZM6	1181	Sodium/potassium/calcium	no	N/A	0.438	0.072	0.697	6e-31
Q9IAL8	663	Sodium/potassium/calcium	no	N/A	0.586	0.173	0.588	2e-30
Q9UI40	661	Sodium/potassium/calcium	no	N/A	0.535	0.158	0.598	2e-30
Q28139	1216	Sodium/potassium/calcium	no	N/A	0.438	0.070	0.686	2e-30
Q9HC58	644	Sodium/potassium/calcium	no	N/A	0.515	0.156	0.631	3e-30
Q9EPQ0	624	Sodium/potassium/calcium	no	N/A	0.515	0.161	0.621	7e-29

>sp|Q9U6A0|NCKX_DROME Sodium/potassium/calcium exchanger Nckx30C OS=Drosophila melanogaster GN=Nckx30C PE=2 SV=4

 Score =  156 bits (394), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 92/120 (76%), Gaps = 2/120 (1%)

Query: 71  TEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIID 130
           T   +    K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVII+
Sbjct: 305 THNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIE 364

Query: 131 RLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           +L + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+   F
Sbjct: 365 KLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALF 424

May function in the removal and maintenance of calcium homeostasis during signaling in the adult and in signaling events during embryogenesis and patterning of imaginal disks. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).
Drosophila melanogaster (taxid: 7227)

>sp|O60721|NCKX1_HUMAN Sodium/potassium/calcium exchanger 1 OS=Homo sapiens GN=SLC24A1 PE=1 SV=1

 Score =  135 bits (340), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 80/96 (83%), Gaps = 6/96 (6%)

Query: 74  PHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQ 133
           P GE      +PPD F++E++R G V+LH+ G++Y+FVALA+VCDE+FVP+L VI D+LQ
Sbjct: 436 PKGE------YPPDLFSVEERRQGWVVLHVFGMMYVFVALAIVCDEYFVPALGVITDKLQ 489

Query: 134 VQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI 169
           + EDVAGATFMAAGGSAPELFTS+IGVF+S  +VGI
Sbjct: 490 ISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGI 525

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q9IAL7|NCKX2_CHICK Sodium/potassium/calcium exchanger 2 OS=Gallus gallus GN=SLC24A2 PE=2 SV=1

 Score =  134 bits (337), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 85/108 (78%), Gaps = 2/108 (1%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           +P D F++E++R GAVILH++G++YMF+ALA+VCDEFFVPSL VI ++L + +DVAGATF
Sbjct: 122 YPEDLFSLEERRKGAVILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLSISDDVAGATF 181

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFD 189
           MAAGGSAPELFTS+IGVF+S  +VGI    GSA      VIG+   F 
Sbjct: 182 MAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFS 229

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Gallus gallus (taxid: 9031)

>sp|O54701|NCKX2_RAT Sodium/potassium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc24a2 PE=2 SV=1

 Score =  134 bits (337), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 9/169 (5%)

Query: 27  EDSNRSHGGEDSN----RSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQTEKP-HGEVKKD 81
           E  ++++ GE S+    R+  G          D  R +T  P  P SQ ++  +G     
Sbjct: 61  ETYSQNNRGEASDVTGPRAAPGHRQRTLLDLNDKIRDYTPQP--PASQEDRSENGTDHAQ 118

Query: 82  PLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGA 141
             +P D F++E++R GA+ILH++G++YMF+ALA+VCDEFFVPSL VI ++L + +DVAGA
Sbjct: 119 GDYPKDVFSLEERRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGA 178

Query: 142 TFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           TFMAAGGSAPELFTS+IGVF++  +VGI    GSA      VIG+   F
Sbjct: 179 TFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALF 227

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

>sp|Q9QZM6|NCKX1_RAT Sodium/potassium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc24a1 PE=2 SV=1

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 75/86 (87%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           +PPD F++E +R G V+LHI G+ Y+FVALA+VCDE+FVP+L VI D+LQ+ EDVAGATF
Sbjct: 407 YPPDLFSVEDRRQGWVVLHIFGMTYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATF 466

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGI 169
           MAAGGSAPELFTS+IGVF+S  +VGI
Sbjct: 467 MAAGGSAPELFTSLIGVFISHSNVGI 492

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

>sp|Q9IAL8|NCKX1_CHICK Sodium/potassium/calcium exchanger 1 OS=Gallus gallus GN=SLC24A1 PE=2 SV=1

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 89/119 (74%), Gaps = 4/119 (3%)

Query: 72  EKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDR 131
           EKP  E K +  +P D F++E++R G V+LHI G++Y+FVALA+VCDE+FVP+L VI ++
Sbjct: 106 EKPVYESKGE--YPQDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITEK 163

Query: 132 LQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           LQ+ EDVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA      VIG    F
Sbjct: 164 LQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALF 222

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Gallus gallus (taxid: 9031)

>sp|Q9UI40|NCKX2_HUMAN Sodium/potassium/calcium exchanger 2 OS=Homo sapiens GN=SLC24A2 PE=1 SV=1

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/107 (59%), Positives = 85/107 (79%), Gaps = 2/107 (1%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           +P D F++E++R GA+ILH++G++YMF+ALA+VCDEFFVPSL VI ++L + +DVAGATF
Sbjct: 120 YPKDIFSLEERRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATF 179

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           MAAGGSAPELFTS+IGVF++  +VGI    GSA      VIG+   F
Sbjct: 180 MAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALF 226

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q28139|NCKX1_BOVIN Sodium/potassium/calcium exchanger 1 OS=Bos taurus GN=SLC24A1 PE=1 SV=2

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 76/86 (88%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           +P D F++E++R G V+LHI G++Y+FVALA+VCDE+FVP+L VI D+LQ+ EDVAGATF
Sbjct: 434 YPRDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATF 493

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGI 169
           MAAGGSAPELFTS+IGVF+S  +VGI
Sbjct: 494 MAAGGSAPELFTSLIGVFISHSNVGI 519

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Bos taurus (taxid: 9913)

>sp|Q9HC58|NCKX3_HUMAN Sodium/potassium/calcium exchanger 3 OS=Homo sapiens GN=SLC24A3 PE=2 SV=4

 Score =  131 bits (329), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 2/103 (1%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           FP D FT E +R GAV+LH+L  +YMF ALA+VCD+FFVPSL+ I +RL + EDVAGATF
Sbjct: 95  FPNDIFTNEDRRQGAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATF 154

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGV 184
           MAAG SAPELFTSVIGVF++  DVG+    GSA      +IGV
Sbjct: 155 MAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGV 197

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q9EPQ0|NCKX3_RAT Sodium/potassium/calcium exchanger 3 (Fragment) OS=Rattus norvegicus GN=Slc24a3 PE=2 SV=1

 Score =  126 bits (317), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%)

Query: 84  FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATF 143
           FP D F+ E +R GAV+LH+L  +YMF ALA+VCD+FFVPSL+ I +RL + EDVAGATF
Sbjct: 76  FPRDIFSNEDRRQGAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATF 135

Query: 144 MAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGV 184
           MAAG SAPELFTSVIGVF++  DVG+    GSA      +IGV
Sbjct: 136 MAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGV 178

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
242009389	250	conserved hypothetical protein [Pediculu	0.561	0.44	0.75	2e-38
170052061	258	conserved hypothetical protein [Culex qu	0.571	0.434	0.745	3e-38
270010753	671	hypothetical protein TcasGA2_TC010208 [T	0.627	0.183	0.698	1e-37
91087797	578	PREDICTED: similar to GA15039-PA [Tribol	0.627	0.212	0.698	1e-37
195147034	823	GL19214 [Drosophila persimilis] gi|19410	0.612	0.145	0.680	2e-37
195438385	893	GK24823 [Drosophila willistoni] gi|19416	0.612	0.134	0.680	4e-37
20151335	536	GH04818p [Drosophila melanogaster]	0.602	0.220	0.7	9e-37
198473598	871	GA15039 [Drosophila pseudoobscura pseudo	0.602	0.135	0.691	2e-36
195385052	822	GJ14796 [Drosophila virilis] gi|19414767	0.739	0.176	0.608	2e-36
257286243	822	IP15356p [Drosophila melanogaster]	0.612	0.145	0.688	2e-36

>gi|242009389|ref|XP_002425470.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509306|gb|EEB12732.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/112 (75%), Positives = 94/112 (83%), Gaps = 2/112 (1%)

Query: 79  KKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDV 138
           +KDPLFP D FTMEQ+R GAVILHI+GV+YMFVALA+VCDEFFVPSLDVII++L + +DV
Sbjct: 37  QKDPLFPEDLFTMEQRRQGAVILHIMGVIYMFVALAIVCDEFFVPSLDVIIEKLDIADDV 96

Query: 139 AGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           AGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+   F
Sbjct: 97  AGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALF 148

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170052061|ref|XP_001862050.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873075|gb|EDS36458.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/114 (74%), Positives = 95/114 (83%), Gaps = 2/114 (1%)

Query: 79  KKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDV 138
           +KDPLFP D FT+EQ+RNGAVILHILGV+YMFVALA+VCDEFFVPSLDVII++L + +DV
Sbjct: 92  QKDPLFPADLFTLEQRRNGAVILHILGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDV 151

Query: 139 AGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDD 190
           AGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+   F  
Sbjct: 152 AGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSK 205

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270010753|gb|EFA07201.1| hypothetical protein TcasGA2_TC010208 [Tribolium castaneum]

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 98/126 (77%), Gaps = 3/126 (2%)

Query: 68  TSQTEKPHGEVKK-DPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLD 126
           T+    P  E K  DPLFP D FT EQ+RNGAVILHILGV+YMFVALA+VCDEFFVP+LD
Sbjct: 31  TTTLAAPTLEPKHHDPLFPRDLFTEEQRRNGAVILHILGVVYMFVALAIVCDEFFVPALD 90

Query: 127 VIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGV 184
           VII++L +Q+DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+
Sbjct: 91  VIIEKLAIQDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGM 150

Query: 185 FVSFDD 190
              F  
Sbjct: 151 CAIFSK 156

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91087797|ref|XP_967264.1| PREDICTED: similar to GA15039-PA [Tribolium castaneum]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 98/126 (77%), Gaps = 3/126 (2%)

Query: 68  TSQTEKPHGEVKK-DPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLD 126
           T+    P  E K  DPLFP D FT EQ+RNGAVILHILGV+YMFVALA+VCDEFFVP+LD
Sbjct: 31  TTTLAAPTLEPKHHDPLFPRDLFTEEQRRNGAVILHILGVVYMFVALAIVCDEFFVPALD 90

Query: 127 VIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGV 184
           VII++L +Q+DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+
Sbjct: 91  VIIEKLAIQDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGM 150

Query: 185 FVSFDD 190
              F  
Sbjct: 151 CAIFSK 156

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195147034|ref|XP_002014485.1| GL19214 [Drosophila persimilis] gi|194106438|gb|EDW28481.1| GL19214 [Drosophila persimilis]

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 94/122 (77%), Gaps = 2/122 (1%)

Query: 69  SQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVI 128
           + T   +  + K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVI
Sbjct: 320 NDTHSENSTITKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVI 379

Query: 129 IDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFV 186
           I++L + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+  
Sbjct: 380 IEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCA 439

Query: 187 SF 188
            F
Sbjct: 440 LF 441

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195438385|ref|XP_002067117.1| GK24823 [Drosophila willistoni] gi|194163202|gb|EDW78103.1| GK24823 [Drosophila willistoni]

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 94/122 (77%), Gaps = 2/122 (1%)

Query: 69  SQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVI 128
           + T   +  + K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVI
Sbjct: 341 NDTHNDNSTITKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVI 400

Query: 129 IDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFV 186
           I++L + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+  
Sbjct: 401 IEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCA 460

Query: 187 SF 188
            F
Sbjct: 461 LF 462

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|20151335|gb|AAM11027.1| GH04818p [Drosophila melanogaster]

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 92/120 (76%), Gaps = 2/120 (1%)

Query: 71  TEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIID 130
           T   +    K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVII+
Sbjct: 305 THNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIE 364

Query: 131 RLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           RL + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+   F
Sbjct: 365 RLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALF 424

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198473598|ref|XP_001356362.2| GA15039 [Drosophila pseudoobscura pseudoobscura] gi|198138026|gb|EAL33425.2| GA15039 [Drosophila pseudoobscura pseudoobscura]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 93/120 (77%), Gaps = 2/120 (1%)

Query: 71  TEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIID 130
           T   +  + K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVII+
Sbjct: 321 THSENSTITKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIE 380

Query: 131 RLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
           +L + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+   F
Sbjct: 381 KLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALF 440

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195385052|ref|XP_002051222.1| GJ14796 [Drosophila virilis] gi|194147679|gb|EDW63377.1| GJ14796 [Drosophila virilis]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 103/148 (69%), Gaps = 3/148 (2%)

Query: 44  GEDSNRSHVGEDSNRSWTSVPVWPTS-QTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILH 102
           GE+      G + N    +VP   +S +T        K PLFP D FT EQ  NGAVILH
Sbjct: 244 GEEELDQEEGRELNGRLDNVPYQRSSNETLIDISNTTKTPLFPKDLFTKEQLENGAVILH 303

Query: 103 ILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFV 162
           I+GV+YMFVALA+VCDEFFVPSLDVII++L + +DVAGATFMAAGGSAPELFTSVIGVFV
Sbjct: 304 IIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVAGATFMAAGGSAPELFTSVIGVFV 363

Query: 163 SFDDVGIAG--GSAPELFTSVIGVFVSF 188
           SFDDVGI    GSA      VIG+   F
Sbjct: 364 SFDDVGIGTIVGSAVFNILFVIGMCALF 391

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|257286243|gb|ACV53068.1| IP15356p [Drosophila melanogaster]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 93/122 (76%), Gaps = 2/122 (1%)

Query: 69  SQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVI 128
           + T   +    K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVI
Sbjct: 278 NDTHNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVI 337

Query: 129 IDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFV 186
           I+RL + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+  
Sbjct: 338 IERLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCA 397

Query: 187 SF 188
            F
Sbjct: 398 LF 399

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
FB|FBgn0028704	881	Nckx30C "Nckx30C" [Drosophila	0.612	0.136	0.680	6.6e-37
WB|WBGene00003569	596	ncx-4 [Caenorhabditis elegans	0.576	0.189	0.586	6e-34
ZFIN|ZDB-GENE-060825-277	619	zgc:153443 "zgc:153443" [Danio	0.688	0.218	0.527	7.3e-32
UNIPROTKB|E1BM98	661	SLC24A2 "Uncharacterized prote	0.841	0.249	0.444	1.2e-30
UNIPROTKB|F1SNG2	231	SLC24A2 "Uncharacterized prote	0.841	0.714	0.444	1.4e-30
RGD|628650	670	Slc24a2 "solute carrier family	0.673	0.197	0.525	1.6e-30
UNIPROTKB|F1NZT1	634	SLC24A2 "Sodium/potassium/calc	0.647	0.200	0.548	1.7e-30
UNIPROTKB|F1NZT5	651	SLC24A2 "Sodium/potassium/calc	0.647	0.195	0.548	1.9e-30
UNIPROTKB|Q9IAL7	651	SLC24A2 "Sodium/potassium/calc	0.647	0.195	0.548	1.9e-30
UNIPROTKB|E1C991	664	SLC24A2 "Sodium/potassium/calc	0.647	0.191	0.548	2e-30

FB|FBgn0028704 Nckx30C "Nckx30C" [Drosophila melanogaster (taxid:7227)]

 Score = 396 (144.5 bits), Expect = 6.6e-37, Sum P(2) = 6.6e-37
 Identities = 83/122 (68%), Positives = 93/122 (76%)

Query:    69 SQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVI 128
             + T   +    K PLFP D FT EQ  NGAVILHI+GV+YMFVALA+VCDEFFVPSLDVI
Sbjct:   303 NDTHNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVI 362

Query:   129 IDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFV 186
             I++L + +DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGI    GSA      VIG+  
Sbjct:   363 IEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCA 422

Query:   187 SF 188
              F
Sbjct:   423 LF 424

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISS;NAS;IDA

GO:0006816 "calcium ion transport" evidence=ISS;IDA;IMP

GO:0006814 "sodium ion transport" evidence=IMP

GO:0016021 "integral to membrane" evidence=ISS;NAS;IDA

GO:0048749 "compound eye development" evidence=IEP

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048812 "neuron projection morphogenesis" evidence=IMP

WB|WBGene00003569 ncx-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 353 (129.3 bits), Expect = 6.0e-34, Sum P(2) = 6.0e-34
 Identities = 71/121 (58%), Positives = 91/121 (75%)

Query:    62 SVPVW----PTSQTE--KPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAV 115
             S P W    PT       P  +V  D  FPPDPF++EQ++NG V+LH+ G++YMFV+LA+
Sbjct:    59 SKPFWKTLLPTCNRSLAPPAPDVNDDGQFPPDPFSLEQRQNGFVVLHMCGLIYMFVSLAI 118

Query:   116 VCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GS 173
             VCDEFFVPSLDV+ ++L + +DVAGATFMAAGGSAPE FTSVIGVF++ ++VGI    GS
Sbjct:   119 VCDEFFVPSLDVLTEKLSLSDDVAGATFMAAGGSAPEFFTSVIGVFIAQNNVGIGTIVGS 178

Query:   174 A 174
             A
Sbjct:   179 A 179

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-060825-277 zgc:153443 "zgc:153443" [Danio rerio (taxid:7955)]

 Score = 355 (130.0 bits), Expect = 7.3e-32, P = 7.3e-32
 Identities = 76/144 (52%), Positives = 101/144 (70%)

Query:    48 NRSHVGEDSNRSWTS-VPVWPTSQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGV 106
             +R+ +  D  R+ ++ VP+   S  E   GE      +P D FT+EQ+R GAV+LH+ G+
Sbjct:    86 HRTVLSSDEERNVSADVPIAMASSAEHSKGE------YPEDLFTLEQRRQGAVVLHMFGM 139

Query:   107 LYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDD 166
             +YMF+ALA+VCDEFFVP+L VI ++L++ +DVAGATFMAAGGSAPELFTSVIGVF+S  +
Sbjct:   140 MYMFIALAIVCDEFFVPALTVITEKLEISDDVAGATFMAAGGSAPELFTSVIGVFISHSN 199

Query:   167 VGIAG--GSAPELFTSVIGVFVSF 188
             VGI    GSA      VIG+   F
Sbjct:   200 VGIGTIVGSAVFNILFVIGMCALF 223

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BM98 SLC24A2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 345 (126.5 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 76/171 (44%), Positives = 105/171 (61%)

Query:    21 FHYDEGEDSNRSHGGEDSNRSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQ-TEKPHGEVK 79
             F   E + +  + G      +HG  +     +  D  R +T  P       +E      +
Sbjct:    59 FSETETQSTGEARGASGPGAAHGYHERTLLDLN-DKIRDYTPQPALSQEGISENSTDHAQ 117

Query:    80 KDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVA 139
              D  +P D F++EQ+R GA+ILH++G++YMF+ALA+VCDEFFVPSL VI ++L + +DVA
Sbjct:   118 GD--YPRDIFSLEQRRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVA 175

Query:   140 GATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
             GATFMAAGGSAPELFTS+IGVF++  +VGI    GSA      VIG+   F
Sbjct:   176 GATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALF 226

GO:0060292 "long term synaptic depression" evidence=IEA

GO:0060291 "long-term synaptic potentiation" evidence=IEA

GO:0007613 "memory" evidence=IEA

GO:0007612 "learning" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SNG2 SLC24A2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 76/171 (44%), Positives = 103/171 (60%)

Query:    21 FHYDEGEDSNRSHGGEDSNRSHGGEDSNRSHVGEDSNRSWTSVPVWPTSQTEKPHGEVKK 80
             F   E + +  + G      +H         +  D  + +T  P  P SQ  K       
Sbjct:    59 FSETETQSTGEASGASGPRVAHSYHQRTLLDLN-DKIQDYTPQP--PLSQEGKSENSTDH 115

Query:    81 -DPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVA 139
                 +P D F++EQ+R GA+ILH++G++YMF+ALA+VCDEFFVPSL VI ++L + +DVA
Sbjct:   116 AQGDYPRDIFSLEQRRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVA 175

Query:   140 GATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF 188
             GATFMAAGGSAPELFTS+IGVF++  +VGI    GSA      VIG+   F
Sbjct:   176 GATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALF 226

GO:0060292 "long term synaptic depression" evidence=IEA

GO:0060291 "long-term synaptic potentiation" evidence=IEA

GO:0007613 "memory" evidence=IEA

GO:0007612 "learning" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|628650 Slc24a2 "solute carrier family 24 (sodium/potassium/calcium exchanger), member 2" [Rattus norvegicus (taxid:10116)]

 Score = 344 (126.2 bits), Expect = 1.6e-30, P = 1.6e-30
 Identities = 72/137 (52%), Positives = 97/137 (70%)

Query:    55 DSNRSWTSVPVWPTSQTEKP-HGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVAL 113
             D  R +T  P  P SQ ++  +G       +P D F++E++R GA+ILH++G++YMF+AL
Sbjct:    93 DKIRDYTPQP--PASQEDRSENGTDHAQGDYPKDVFSLEERRKGAIILHVIGMIYMFIAL 150

Query:   114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG-- 171
             A+VCDEFFVPSL VI ++L + +DVAGATFMAAGGSAPELFTS+IGVF++  +VGI    
Sbjct:   151 AIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIV 210

Query:   172 GSAPELFTSVIGVFVSF 188
             GSA      VIG+   F
Sbjct:   211 GSAVFNILFVIGMCALF 227

GO:0005262 "calcium channel activity" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IMP

GO:0006816 "calcium ion transport" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA;ISO

GO:0007601 "visual perception" evidence=IEA

GO:0007612 "learning" evidence=IEA;ISO

GO:0007613 "memory" evidence=IEA;ISO

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=IMP;IDA

GO:0015293 "symporter activity" evidence=IEA

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016151 "nickel cation binding" evidence=IMP

GO:0030145 "manganese ion binding" evidence=IMP

GO:0030955 "potassium ion binding" evidence=IMP

GO:0031226 "intrinsic to plasma membrane" evidence=IMP

GO:0031402 "sodium ion binding" evidence=IMP

GO:0046870 "cadmium ion binding" evidence=IMP

GO:0046983 "protein dimerization activity" evidence=IMP

GO:0060291 "long-term synaptic potentiation" evidence=IEA;ISO

GO:0060292 "long term synaptic depression" evidence=IEA;ISO

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;IDA

UNIPROTKB|F1NZT1 SLC24A2 "Sodium/potassium/calcium exchanger 2" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 1.7e-30, P = 1.7e-30
 Identities = 73/133 (54%), Positives = 94/133 (70%)

Query:    62 SVPVWPTSQT-EKPHGEVKKDPL---FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVC 117
             S P  PTS   E  H    ++     +P D F++E++R GAVILH++G++YMF+ALA+VC
Sbjct:    96 STPDSPTSMKHEAEHDNATEEHSKGEYPEDLFSLEERRKGAVILHVIGMIYMFIALAIVC 155

Query:   118 DEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAP 175
             DEFFVPSL VI ++L + +DVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA 
Sbjct:   156 DEFFVPSLTVITEKLSISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAV 215

Query:   176 ELFTSVIGVFVSF 188
                  VIG+   F
Sbjct:   216 FNILFVIGMCALF 228

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NZT5 SLC24A2 "Sodium/potassium/calcium exchanger 2" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 1.9e-30, P = 1.9e-30
 Identities = 73/133 (54%), Positives = 94/133 (70%)

Query:    62 SVPVWPTSQT-EKPHGEVKKDPL---FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVC 117
             S P  PTS   E  H    ++     +P D F++E++R GAVILH++G++YMF+ALA+VC
Sbjct:    96 STPDSPTSMKHEAEHDNATEEHSKGEYPEDLFSLEERRKGAVILHVIGMIYMFIALAIVC 155

Query:   118 DEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAP 175
             DEFFVPSL VI ++L + +DVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA 
Sbjct:   156 DEFFVPSLTVITEKLSISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAV 215

Query:   176 ELFTSVIGVFVSF 188
                  VIG+   F
Sbjct:   216 FNILFVIGMCALF 228

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9IAL7 SLC24A2 "Sodium/potassium/calcium exchanger 2" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 1.9e-30, P = 1.9e-30
 Identities = 73/133 (54%), Positives = 94/133 (70%)

Query:    62 SVPVWPTSQT-EKPHGEVKKDPL---FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVC 117
             S P  PTS   E  H    ++     +P D F++E++R GAVILH++G++YMF+ALA+VC
Sbjct:    96 STPDSPTSMKHEAEHDNATEEHSKGEYPEDLFSLEERRKGAVILHVIGMIYMFIALAIVC 155

Query:   118 DEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAP 175
             DEFFVPSL VI ++L + +DVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA 
Sbjct:   156 DEFFVPSLTVITEKLSISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAV 215

Query:   176 ELFTSVIGVFVSF 188
                  VIG+   F
Sbjct:   216 FNILFVIGMCALF 228

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0015293 "symporter activity" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0050896 "response to stimulus" evidence=IEA

UNIPROTKB|E1C991 SLC24A2 "Sodium/potassium/calcium exchanger 2" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
 Identities = 73/133 (54%), Positives = 94/133 (70%)

Query:    62 SVPVWPTSQT-EKPHGEVKKDPL---FPPDPFTMEQKRNGAVILHILGVLYMFVALAVVC 117
             S P  PTS   E  H    ++     +P D F++E++R GAVILH++G++YMF+ALA+VC
Sbjct:    96 STPDSPTSMKHEAEHDNATEEHSKGEYPEDLFSLEERRKGAVILHVIGMIYMFIALAIVC 155

Query:   118 DEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAP 175
             DEFFVPSL VI ++L + +DVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA 
Sbjct:   156 DEFFVPSLTVITEKLSISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAV 215

Query:   176 ELFTSVIGVFVSF 188
                  VIG+   F
Sbjct:   216 FNILFVIGMCALF 228

GO:0016021 "integral to membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0007612 "learning" evidence=IEA

GO:0007613 "memory" evidence=IEA

GO:0060291 "long-term synaptic potentiation" evidence=IEA

GO:0060292 "long term synaptic depression" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O60721	NCKX1_HUMAN	No assigned EC number	0.6458	0.4591	0.0818	yes	N/A
Q9IAL7	NCKX2_CHICK	No assigned EC number	0.6111	0.5408	0.1628	yes	N/A
Q9U6A0	NCKX_DROME	No assigned EC number	0.6916	0.6020	0.1339	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	196
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-40
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	2e-16
pfam01699	135	pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot	4e-12
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	3e-07
TIGR00845	928	TIGR00845, caca, sodium/calcium exchanger 1	0.001
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	0.004

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score =  146 bits (369), Expect = 1e-40
 Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 9/125 (7%)

Query: 62  SVPVWPTSQTE-KPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEF 120
           S    P  Q +  P  E      +PPD F++E++R G V+LHI G++Y+FVALA+VCDE+
Sbjct: 425 SPSALPPGQPDLHPKAE------YPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEY 478

Query: 121 FVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELF 178
           FVP+L VI D+LQ+ EDVAGATFMAAGGSAPELFTS+IGVF+S  +VGI    GSA    
Sbjct: 479 FVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNI 538

Query: 179 TSVIG 183
             VIG
Sbjct: 539 LFVIG 543

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 75.1 bits (185), Expect = 2e-16
 Identities = 23/69 (33%), Positives = 36/69 (52%)

Query: 101 LHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGV 160
           L ++G L + + L +   + FV S   I   L +   + G T +A G S PELFTS+I  
Sbjct: 1   LLLIGYLILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIAS 60

Query: 161 FVSFDDVGI 169
            +   D+G+
Sbjct: 61  LMGQPDIGV 69

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 112 ALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG 171
            L ++  +  V S + I + L +   V G T +A G S PELF+S+I       D+ +  
Sbjct: 1   LLIILLADLLVDSAESIAEVLGISPTVIGLTLLALGTSLPELFSSIIAALKGNADLALGN 60

Query: 172 --GSAPELFTSVIGVFVSF 188
             GS       V+G+    
Sbjct: 61  VIGSNLFNILLVLGLSALI 79

This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3. Length = 135

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 98  AVILHILGVLYMFVALA--VVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFT 155
           A+ + +L +L +   L   V   +  V +   I  R  + E + G T +A G S PEL  
Sbjct: 4   ALEMLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAV 63

Query: 156 SVIGVFVSFDDVGI 169
           S++       D+ +
Sbjct: 64  SLVAALSGNPDIAV 77

Length = 320

>gnl|CDD|233149 TIGR00845, caca, sodium/calcium exchanger 1

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 29/130 (22%)

Query: 82  PLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDR---------- 131
           P++ P   ++  K   A +  +  ++YMF+ ++++ D F + S++VI  +          
Sbjct: 59  PIWEPQNPSVGDKIARATVYFVA-MVYMFLGVSIIADRF-MASIEVITSQEKEITIKKPN 116

Query: 132 -----LQVQ---EDVAGATFMAAGGSAPELFTSVIGV----FVSFDDVG---IAGGSAPE 176
                  V+   E V+  T MA G SAPE+  SVI V    F +  D+G   I G +A  
Sbjct: 117 GETTVTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFEA-GDLGPSTIVGSAAFN 175

Query: 177 LFTSVIGVFV 186
           +F  +I + V
Sbjct: 176 MFI-IIAICV 184

The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]. Length = 928

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 86  PDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMA 145
           P     E+ + G++   +L ++   + L V   E  V     I +   + E + G T +A
Sbjct: 160 PGEQENERPKKGSLRKALLVLVIGLILLVVGS-ELLVDGAVEIAEIFGISELIIGLTIVA 218

Query: 146 AGGSAPELFTSVIGVFVSFDDVGI 169
            G S PEL  S++      DD+ +
Sbjct: 219 IGTSLPELVVSIVAARKGEDDIAV 242

Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG1307|consensus	588		100.0
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.94
PLN03151	650	cation/calcium exchanger; Provisional	99.86
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.81
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.73
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.71
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.67
KOG2399|consensus	605		99.63
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.62
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.6
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.53
PF01699	140	Na_Ca_ex: Sodium/calcium exchanger protein; InterP	99.47
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.47
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.44
TIGR00378	349	cax calcium/proton exchanger (cax).	99.31
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.29
TIGR00378	349	cax calcium/proton exchanger (cax).	99.26
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.2
KOG1307|consensus	588		99.18
KOG1306|consensus	596		98.9
PLN03151	650	cation/calcium exchanger; Provisional	98.24
KOG2399|consensus	605		97.7
KOG1306|consensus	596		97.7
KOG1397|consensus	441		97.13
PRK10599	366	calcium/sodium:proton antiporter; Provisional	96.8
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	96.66
KOG1397|consensus	441		91.77
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	83.3

>KOG1307|consensus

Probab=100.00  E-value=5.4e-35  Score=273.17  Aligned_cols=145  Identities=53%  Similarity=0.810  Sum_probs=127.0

Q ss_pred             CCCcccccCCcccccccccCCCCcCCCCCCCCCCCCCCCCccchhccchhHHHHHHHHHHHHHHHHHHHhhccccccHHH
Q psy2839          48 NRSHVGEDSNRSWTSVPVWPTSQTEKPHGEVKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDV  127 (196)
Q Consensus        48 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~~f~~~~~~~g~vil~ll~llylFl~L~iva~~yfvpsl~~  127 (196)
                      .|.+..+++.-..+.++....+. .+++.+..+.++||+|+|+.+|||+|++++|+++++|+|++|+++||+|||||+++
T Consensus         7 ~~~~~~~~k~~~~t~~pt~~~~~-~~~~~~~~~~~~fP~DiFs~e~rr~G~VvlHv~g~iYmFvALAIVCDefFVPSL~v   85 (588)
T KOG1307|consen    7 DRKWVMADKLMQVTPTPTSEDAG-LPNNKNCHALGEFPPDIFSLEQRRQGAVVLHVIGLIYMFVALAIVCDEFFVPSLDV   85 (588)
T ss_pred             cccccccCcccccCCCCCccccc-CCCCCCCcccccCCCccccHHHhhcCcEEeehhhHHHHHHHHHHHhcccccccHHH
Confidence            45566666665555543333222 23444457899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeeccce
Q psy2839         128 IIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDVGI  193 (196)
Q Consensus       128 Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~~i  193 (196)
                      |+++|+||++|||+||||.|+|+||||||+++++..++|+|+||  ||++||+++|+|+|++++++.+
T Consensus        86 ItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vig~C~LFSrqvl  153 (588)
T KOG1307|consen   86 ITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVIGVCGLFSRQVL  153 (588)
T ss_pred             HHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHHHHHHhhccccc
Confidence            99999999999999999999999999999999999999999999  9999999999999999998643

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.94  E-value=1e-26  Score=230.85  Aligned_cols=114  Identities=59%  Similarity=0.982  Sum_probs=110.6

Q ss_pred             CCCCCCCCCCccchhccchhHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHH
Q psy2839          78 VKKDPLFPPDPFTMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSV  157 (196)
Q Consensus        78 ~~~~~~fp~~~f~~~~~~~g~vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsi  157 (196)
                      ..++.+||+++|+.++|+.+.+++++++++|+|++|+++|++||+|+++.||++|+||++++|+||||+|||+||||+++
T Consensus       436 ~hp~~efP~d~fti~~R~~g~VVL~l~~liy~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSL  515 (1096)
T TIGR00927       436 LHPKAEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSL  515 (1096)
T ss_pred             CCchhhCCcccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHH
Confidence            34799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCceeecc--chHHHHHHHhhheeeeeecc
Q psy2839         158 IGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDV  191 (196)
Q Consensus       158 iAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~  191 (196)
                      +|++.++.|+++||  |||+||+++|+|+|+++++.
T Consensus       516 iAv~~g~sDIGVGNIVGSnIFNILLVLGl~aLis~~  551 (1096)
T TIGR00927       516 IGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSRE  551 (1096)
T ss_pred             HHHHcCCCcceehhhHhHHHHHHHHHHhhheeeccc
Confidence            99999999999999  99999999999999999874

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.86  E-value=3.2e-22  Score=193.57  Aligned_cols=114  Identities=22%  Similarity=0.295  Sum_probs=100.1

Q ss_pred             CCCCCCCCCCCCCCccchhcc---chhHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCc
Q psy2839          74 PHGEVKKDPLFPPDPFTMEQK---RNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSA  150 (196)
Q Consensus        74 ~~~~~~~~~~fp~~~f~~~~~---~~g~vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSa  150 (196)
                      ++|+++  ..+++.-+.||+.   +...+++.++|++++|+.|+.++++||+|+++.||++++|||++||+|+||+|||+
T Consensus       114 ~~C~~~--~~~~Y~~~~yC~~~~~~~l~~~~l~~~l~~lF~~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsa  191 (650)
T PLN03151        114 PICSSG--GFFDYLKFFYCSCEDFRILGYAVLGVWLVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGA  191 (650)
T ss_pred             CCCCCC--CeecceeEEEecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCc
Confidence            467554  5667777777763   33456667799999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhhc-CCCceeecc--chHHHHHHHhhheeeeee
Q psy2839         151 PELFTSVIGVFV-SFDDVGIAG--GSAPELFTSVIGVFVSFD  189 (196)
Q Consensus       151 PELftsiiAv~~-g~~dIaVGn--GSniFNil~I~Gv~~lis  189 (196)
                      ||++++++|+.. ++.++++|+  ||++||+++|+|+++++.
T Consensus       192 PDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~  233 (650)
T PLN03151        192 PDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCV  233 (650)
T ss_pred             HHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhc
Confidence            999999999765 678999999  999999999999999975

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.81  E-value=8.9e-20  Score=181.75  Aligned_cols=102  Identities=30%  Similarity=0.451  Sum_probs=90.6

Q ss_pred             chhccchhHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhc------------------CCccccceeeeeccCCch
Q psy2839          90 TMEQKRNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQ------------------VQEDVAGATFMAAGGSAP  151 (196)
Q Consensus        90 ~~~~~~~g~vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~------------------Ise~VaGaTlLA~GTSaP  151 (196)
                      +.++| ..+.++|+++++|||++++++||+|+ ++++.|+++.+                  ||++|+|+|+||+|||+|
T Consensus        67 s~~~~-~~r~~~~~~~l~y~F~~~~i~ad~f~-~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaP  144 (928)
T TIGR00845        67 SVGDK-IARATVYFVAMVYMFLGVSIIADRFM-ASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAP  144 (928)
T ss_pred             CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCch
Confidence            44444 44678999999999999999999985 99999999654                  699999999999999999


Q ss_pred             hHHHHHHHhhcC---CCceeecc--chHHHHHHHhhheeeeeeccce
Q psy2839         152 ELFTSVIGVFVS---FDDVGIAG--GSAPELFTSVIGVFVSFDDVGI  193 (196)
Q Consensus       152 ELftsiiAv~~g---~~dIaVGn--GSniFNil~I~Gv~~lisp~~i  193 (196)
                      |++++++++..+   ++|+|+|+  ||++||+++|+|+|+++-|.+-
T Consensus       145 e~~~s~~~~~~~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~  191 (928)
T TIGR00845       145 EILLSVIEVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGE  191 (928)
T ss_pred             HHHHHHHHHhccCCccccccccceehhHHHHHHhhheeEEEeccCcc
Confidence            999999999875   45999999  9999999999999999988653

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.73  E-value=1e-18  Score=154.42  Aligned_cols=90  Identities=29%  Similarity=0.448  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHH
Q psy2839         102 HILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFT  179 (196)
Q Consensus       102 ~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil  179 (196)
                      |++..+++.+.+...++++|+++++.|++++|+||.++|+|++|+|||+||+++++.|+++|+.|+++||  ||++||++
T Consensus         2 ~~~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l   81 (307)
T TIGR00367         2 ILIGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNIL   81 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHH
Confidence            5666777788889999999999999999999999999999999999999999999999999999999999  99999999


Q ss_pred             Hhhheeeeeecc
Q psy2839         180 SVIGVFVSFDDV  191 (196)
Q Consensus       180 ~I~Gv~~lisp~  191 (196)
                      +++|++++++|.
T Consensus        82 ~i~g~~~l~~~~   93 (307)
T TIGR00367        82 LILGLSAIFSPI   93 (307)
T ss_pred             HHHHHHHhhcce
Confidence            999999998764

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.71  E-value=2.2e-18  Score=154.35  Aligned_cols=85  Identities=16%  Similarity=0.254  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhh
Q psy2839         106 VLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIG  183 (196)
Q Consensus       106 llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~G  183 (196)
                      ++..++++. .++++|+++++.||+++|+||.++|+|++|+|||+||+++++.|+++|++|+++||  |||+||+++++|
T Consensus         8 ~~~gl~~l~-~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lilg   86 (325)
T PRK10734          8 LIIGLLLLV-YGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILG   86 (325)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHH
Confidence            333444444 46678999999999999999999999999999999999999999999999999999  999999999999


Q ss_pred             eeeeeecc
Q psy2839         184 VFVSFDDV  191 (196)
Q Consensus       184 v~~lisp~  191 (196)
                      ++++++|.
T Consensus        87 ~~~l~~~~   94 (325)
T PRK10734         87 LAALIRPF   94 (325)
T ss_pred             HHHHhCCc
Confidence            99999874

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.67  E-value=3.1e-17  Score=147.34  Aligned_cols=94  Identities=22%  Similarity=0.312  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHH
Q psy2839          99 VILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPE  176 (196)
Q Consensus        99 vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniF  176 (196)
                      ..+..+..+.+.+.+.+.++|+|+++++.|++++|+|+.++|+|++|+|||+||+++++.|+..|+.|+++||  |||++
T Consensus         7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~   86 (320)
T COG0530           7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIF   86 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHH
Confidence            4555566666777788888999999999999999999999999999999999999999999999999999999  99999


Q ss_pred             HHHHhhheeeeeeccc
Q psy2839         177 LFTSVIGVFVSFDDVG  192 (196)
Q Consensus       177 Nil~I~Gv~~lisp~~  192 (196)
                      |++++.|+++++++..
T Consensus        87 ni~li~gl~ali~~~~  102 (320)
T COG0530          87 NILLILGLAALIAPLK  102 (320)
T ss_pred             HHHHHHHHHHHHhhhH
Confidence            9999999999998864

>KOG2399|consensus

Probab=99.63  E-value=1.6e-16  Score=153.27  Aligned_cols=114  Identities=29%  Similarity=0.446  Sum_probs=100.5

Q ss_pred             CCCCCCCCCccchhc-c---chhHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHH
Q psy2839          79 KKDPLFPPDPFTMEQ-K---RNGAVILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELF  154 (196)
Q Consensus        79 ~~~~~fp~~~f~~~~-~---~~g~vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELf  154 (196)
                      +.-+.+++.-+-+|+ .   +...+++..++++++|+.|+.++++||+|+++.+++.++|||.+||+|+||+||++||+|
T Consensus        80 ~~~g~~~y~~~~~C~~~~~~~i~~i~~~~~~~~~lf~~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf  159 (605)
T KOG2399|consen   80 ESGGFFDYLRLFYCGLNREVRIILIILLVLWLLFLFYLLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVF  159 (605)
T ss_pred             cCCCchhhHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHH
Confidence            556777777777777 3   455566777788899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC-CCceeecc--chHHHHHHHhhheeeeeeccc
Q psy2839         155 TSVIGVFVS-FDDVGIAG--GSAPELFTSVIGVFVSFDDVG  192 (196)
Q Consensus       155 tsiiAv~~g-~~dIaVGn--GSniFNil~I~Gv~~lisp~~  192 (196)
                      +++.|+... +.|+++|+  |+++|.++++.|..++..|-+
T Consensus       160 ~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t~pFk  200 (605)
T KOG2399|consen  160 ASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILTKPFK  200 (605)
T ss_pred             hhhheeecCCCcccHHHHHhccceeEEeeEeeeeeeeccee
Confidence            999998874 34799999  999999999999999998844

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.62  E-value=1.2e-16  Score=143.26  Aligned_cols=79  Identities=22%  Similarity=0.286  Sum_probs=74.6

Q ss_pred             HHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeecc
Q psy2839         114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDV  191 (196)
Q Consensus       114 ~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~  191 (196)
                      ...++++++++++.||+.+|+||.++|+|++|+|||+||+++++.++++|+.|+++||  |||+||+++++|+++++.|.
T Consensus       186 l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l~~~~  265 (325)
T PRK10734        186 MPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALISPG  265 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHhhccc
Confidence            3466778999999999999999999999999999999999999999999999999999  99999999999999999875


Q ss_pred             c
Q psy2839         192 G  192 (196)
Q Consensus       192 ~  192 (196)
                      .
T Consensus       266 ~  266 (325)
T PRK10734        266 E  266 (325)
T ss_pred             c
Confidence            4

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.60  E-value=4.2e-16  Score=140.04  Aligned_cols=77  Identities=27%  Similarity=0.341  Sum_probs=73.8

Q ss_pred             HHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeec
Q psy2839         114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDD  190 (196)
Q Consensus       114 ~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp  190 (196)
                      ..+++++++.+...||+.+|+||.++|+|++|+|||+||+.+++.++++|+.|+++||  |||+||+++++|+.+++.|
T Consensus       187 l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~iavGnviGSni~n~~~~lGi~~~~~~  265 (320)
T COG0530         187 LVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLGISALIGP  265 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHhHHHhccc
Confidence            4556778999999999999999999999999999999999999999999999999999  9999999999999999988

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.53  E-value=3.1e-15  Score=132.31  Aligned_cols=79  Identities=27%  Similarity=0.314  Sum_probs=73.9

Q ss_pred             HHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeec
Q psy2839         113 LAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDD  190 (196)
Q Consensus       113 L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp  190 (196)
                      +...++++++++++.+++.+|+|+.++|+|++|+|||+||+++++.++++|+.|+++||  ||++||+++++|++.++.|
T Consensus       181 ~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~g~~~~~~~  260 (307)
T TIGR00367       181 GLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFYP  260 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHHHHHHHhcc
Confidence            34456668999999999999999999999999999999999999999999999999999  9999999999999999877


Q ss_pred             c
Q psy2839         191 V  191 (196)
Q Consensus       191 ~  191 (196)
                      .
T Consensus       261 ~  261 (307)
T TIGR00367       261 I  261 (307)
T ss_pred             c
Confidence            3

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins

Probab=99.47  E-value=3.8e-15  Score=113.96  Aligned_cols=79  Identities=29%  Similarity=0.475  Sum_probs=71.3

Q ss_pred             HHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeecc
Q psy2839         114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDV  191 (196)
Q Consensus       114 ~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~  191 (196)
                      ...++++++++++.+++++|+|+.++|+|++|++||+||+++++.++.+|+.++++|+  ||++||++++.|++.++.+.
T Consensus         3 i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~~   82 (140)
T PF01699_consen    3 IIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFGPI   82 (140)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS-B
T ss_pred             ehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhccc
Confidence            4567778999999999999999999999999999999999999999999999999999  99999999999999988765


Q ss_pred             c
Q psy2839         192 G  192 (196)
Q Consensus       192 ~  192 (196)
                      .
T Consensus        83 ~   83 (140)
T PF01699_consen   83 K   83 (140)
T ss_dssp             -
T ss_pred             c
Confidence            3

This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.47  E-value=1.1e-14  Score=132.19  Aligned_cols=78  Identities=21%  Similarity=0.272  Sum_probs=73.3

Q ss_pred             HHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeec
Q psy2839         113 LAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDD  190 (196)
Q Consensus       113 L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp  190 (196)
                      +...++++++.+++.+++.+|+|+.++|+|++|+|||+||+.+++.++++|+.|+++||  |||+||+++++|+++++++
T Consensus       232 ~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~li~~  311 (365)
T TIGR00846       232 VVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVVLVAW  311 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556778999999999999999999999999999999999999999999999999999  9999999999999998774

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.44  E-value=1.3e-13  Score=138.18  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=70.0

Q ss_pred             HHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCC-Cceeecc--chHHHHHHHhhheeeee
Q psy2839         112 ALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSF-DDVGIAG--GSAPELFTSVIGVFVSF  188 (196)
Q Consensus       112 ~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~-~dIaVGn--GSniFNil~I~Gv~~li  188 (196)
                      .+++.+. .++.++..++..+|+++.++|+|++|+|||+||++++++|+++++ .|+++||  |||+||+++++|++.++
T Consensus       765 ~Ig~l~~-~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i  843 (928)
T TIGR00845       765 MIGVLTA-FIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSI  843 (928)
T ss_pred             HHHHHHH-HHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHH
Confidence            3444444 367789999999999999999999999999999999999999975 9999999  99999999999999888


Q ss_pred             ec
Q psy2839         189 DD  190 (196)
Q Consensus       189 sp  190 (196)
                      ++
T Consensus       844 ~~  845 (928)
T TIGR00845       844 AA  845 (928)
T ss_pred             hh
Confidence            74

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.31  E-value=5.1e-13  Score=120.56  Aligned_cols=80  Identities=20%  Similarity=0.278  Sum_probs=71.4

Q ss_pred             HHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhhee
Q psy2839         108 YMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVF  185 (196)
Q Consensus       108 ylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~  185 (196)
                      ++++++... +++++.+.+.||+++|  +.+.|+|..++|| +||+++++.|+.+|+.|+++||  ||+++|+++|+|++
T Consensus        24 ~~~~aiipl-a~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLilGls   99 (349)
T TIGR00378        24 FNFLAIIPL-AAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVLGLC   99 (349)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHHHHH
Confidence            344444444 4468999999999999  8999999999999 9999999999999999999999  99999999999999


Q ss_pred             eeeecc
Q psy2839         186 VSFDDV  191 (196)
Q Consensus       186 ~lisp~  191 (196)
                      +++.+.
T Consensus       100 ~liggl  105 (349)
T TIGR00378       100 FFFGGL  105 (349)
T ss_pred             HHHhcc
Confidence            998664

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.29  E-value=5.3e-13  Score=121.31  Aligned_cols=76  Identities=21%  Similarity=0.167  Sum_probs=69.0

Q ss_pred             HHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeecc
Q psy2839         114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDV  191 (196)
Q Consensus       114 ~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~  191 (196)
                      .+.++++++.+.+.||+++|++   .|.+++|+|||+||+++++.|+.+|+.|+++||  ||+++|+++|+|+|++++|.
T Consensus        47 li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIlGl~~l~~~~  123 (365)
T TIGR00846        47 IIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGGI  123 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4456667999999999999988   666788999999999999999999999999999  99999999999999998765


Q ss_pred             c
Q psy2839         192 G  192 (196)
Q Consensus       192 ~  192 (196)
                      .
T Consensus       124 ~  124 (365)
T TIGR00846       124 K  124 (365)
T ss_pred             C
Confidence            4

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.26  E-value=1.3e-12  Score=117.92  Aligned_cols=75  Identities=23%  Similarity=0.344  Sum_probs=68.9

Q ss_pred             HHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeee
Q psy2839         113 LAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVS  187 (196)
Q Consensus       113 L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~l  187 (196)
                      +...++++++.+++.+++.+|+|+.++|+|++|++||+||+++++.++++++.|+++||  |||++|+++++.+..+
T Consensus       216 ~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lvl  292 (349)
T TIGR00378       216 IVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLVI  292 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHHH
Confidence            34456778999999999999999999999999999999999999999999999999999  9999999998887443

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.20  E-value=2.9e-12  Score=128.77  Aligned_cols=67  Identities=28%  Similarity=0.296  Sum_probs=63.1

Q ss_pred             ccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeee
Q psy2839         121 FVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVS  187 (196)
Q Consensus       121 fvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~l  187 (196)
                      ++..+..|+..+|||++++|+||+|+|||+||++++++++++|..|||++|  |||+||+++.+|+..+
T Consensus       952 lV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllgLGlPWl 1020 (1096)
T TIGR00927       952 MVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWL 1020 (1096)
T ss_pred             HHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeeeccHHHH
Confidence            456689999999999999999999999999999999999999999999999  9999999999998744

>KOG1307|consensus

Probab=99.18  E-value=3.7e-11  Score=113.90  Aligned_cols=63  Identities=27%  Similarity=0.335  Sum_probs=58.4

Q ss_pred             cHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheee
Q psy2839         124 SLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFV  186 (196)
Q Consensus       124 sl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~  186 (196)
                      =+..|.+.+|||+.++|+|+||.|||.||+.+|++-+++|-+||||.+  |||+|.+++-+++.=
T Consensus       446 wa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPW  510 (588)
T KOG1307|consen  446 WANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPW  510 (588)
T ss_pred             HHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHH
Confidence            356788999999999999999999999999999999999999999999  999999998887643

>KOG1306|consensus

Probab=98.90  E-value=3e-10  Score=108.30  Aligned_cols=93  Identities=31%  Similarity=0.486  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHhc------------------CCccccceeeeeccCCchhHHHHHHHh
Q psy2839          99 VILHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQ------------------VQEDVAGATFMAAGGSAPELFTSVIGV  160 (196)
Q Consensus        99 vil~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~------------------Ise~VaGaTlLA~GTSaPELftsiiAv  160 (196)
                      -++|++.+.|+|+++++.+|+| +-+++.|...-+                  ++++++.+|+||+|+|+||+..|++-+
T Consensus        28 ~~vYfv~l~Y~F~GvsiiadrF-m~sIE~its~~kev~v~k~~g~e~~~~vriWNeTVsnltLmAlGsSaPEIlLSiIe~  106 (596)
T KOG1306|consen   28 AIVYFVALPYAFLGVSIIADRF-MASIEVITSASREVIVIKPTGEESTTYVRVWNETVSNLTLMALGSSAPEILLSIIEF  106 (596)
T ss_pred             ceEEeehhHHHHhhHHHHhhhh-eeeeeccccccceeEEEccCCceeEEEEEEechhhHHHHHhhcccCcchhhHHHHHH
Confidence            5678899999999999999985 778888876653                  799999999999999999999999998


Q ss_pred             hcC---CCceeecc--chHHHHHHHhhheeeeeeccc
Q psy2839         161 FVS---FDDVGIAG--GSAPELFTSVIGVFVSFDDVG  192 (196)
Q Consensus       161 ~~g---~~dIaVGn--GSniFNil~I~Gv~~lisp~~  192 (196)
                      -.+   ..|++.|+  ||+.||+..|+++|..+-|.+
T Consensus       107 ~gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~G  143 (596)
T KOG1306|consen  107 CGNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAG  143 (596)
T ss_pred             hcccccccCcCCceEechhhhhhhhheEEEEEEcCCc
Confidence            764   35899999  999999999999999988764

>PLN03151 cation/calcium exchanger; Provisional

Probab=98.24  E-value=4.1e-07  Score=89.19  Aligned_cols=73  Identities=16%  Similarity=0.143  Sum_probs=64.2

Q ss_pred             hhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCc--eeecc--chHHHHHHHhhheeeeee
Q psy2839         117 CDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDD--VGIAG--GSAPELFTSVIGVFVSFD  189 (196)
Q Consensus       117 a~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~d--IaVGn--GSniFNil~I~Gv~~lis  189 (196)
                      ++.-++.-++.++..+|+|+++.|+|++|+|||+||+++++.=+++|.+.  ||+.+  |+.+||+++-+|+..++.
T Consensus       499 ~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~  575 (650)
T PLN03151        499 IANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLG  575 (650)
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccHHHHHH
Confidence            34447888999999999999999999999999999999999999998764  67667  999999999999887654

>KOG2399|consensus

Probab=97.70  E-value=1.7e-05  Score=77.49  Aligned_cols=68  Identities=16%  Similarity=0.216  Sum_probs=63.6

Q ss_pred             ccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeee
Q psy2839         121 FVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSF  188 (196)
Q Consensus       121 fvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~li  188 (196)
                      ++.-++.+...+|+||.+.|+|++|.|||.-||++++.=++.|.+.||.+.  |.-+||+++-+|+...+
T Consensus       466 iv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i  535 (605)
T KOG2399|consen  466 LVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVI  535 (605)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHH
Confidence            688889999999999999999999999999999999999999999999999  99999999988876654

>KOG1306|consensus

Probab=97.70  E-value=1.3e-05  Score=77.17  Aligned_cols=62  Identities=26%  Similarity=0.274  Sum_probs=53.0

Q ss_pred             HHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcC-CCceeecc--chHHHHHHHhhheee
Q psy2839         125 LDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVS-FDDVGIAG--GSAPELFTSVIGVFV  186 (196)
Q Consensus       125 l~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g-~~dIaVGn--GSniFNil~I~Gv~~  186 (196)
                      ++.+.=..|+.+.|..+|++|+|||.||.|.|-+|+... ..|=++||  |||.-|+.+-+|+.=
T Consensus       449 as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflGiG~aW  513 (596)
T KOG1306|consen  449 ASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLGIGLAW  513 (596)
T ss_pred             HHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEEeccHHH
Confidence            344444568999999999999999999999999999875 46899999  999999998888753

>KOG1397|consensus

Probab=97.13  E-value=0.00057  Score=64.43  Aligned_cols=73  Identities=19%  Similarity=0.207  Sum_probs=64.9

Q ss_pred             HHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeee
Q psy2839         115 VVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVS  187 (196)
Q Consensus       115 iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~l  187 (196)
                      -.+++|+|..++..++++++|+..+|+|++++=--+-|-..+++=+++++-|+.+|-  ||++=..+++...+.+
T Consensus       303 sllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~  377 (441)
T KOG1397|consen  303 SLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVI  377 (441)
T ss_pred             HHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHH
Confidence            345668999999999999999999999999999999999999999999999998888  9999888877765544

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=96.80  E-value=0.00054  Score=63.57  Aligned_cols=80  Identities=13%  Similarity=0.142  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhh
Q psy2839         106 VLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIG  183 (196)
Q Consensus       106 llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~G  183 (196)
                      ++...+.+.. .++++++++|...+.+|+|+.++|+.+ |+=.-+||-.+++.++++++-|.+++-  ||.+--+++++-
T Consensus       227 L~v~lv~Vv~-lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP  304 (366)
T PRK10599        227 LIIHLIAVIA-VTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVP  304 (366)
T ss_pred             HHHHHHHHHH-HHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcchhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence            3333333444 477899999999999999999999876 666669999999999999999999998  999888877766


Q ss_pred             eeee
Q psy2839         184 VFVS  187 (196)
Q Consensus       184 v~~l  187 (196)
                      ...+
T Consensus       305 ~lvl  308 (366)
T PRK10599        305 VVTL  308 (366)
T ss_pred             HHHH
Confidence            5544

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=96.66  E-value=0.0016  Score=60.72  Aligned_cols=84  Identities=25%  Similarity=0.279  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHH
Q psy2839         101 LHILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELF  178 (196)
Q Consensus       101 l~ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNi  178 (196)
                      ....+++..-+..+.. +++++.++|...+.+|+|+...|+++.++=--+||-.+++.++++++-|.+++=  ||++-..
T Consensus       221 ~s~~vLl~~tv~v~~l-ae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~  299 (368)
T COG0387         221 LSTGVLLIATVLVALL-AEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTA  299 (368)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            3344444444444544 456899999999999999999999999999899999999999999999887776  8887776


Q ss_pred             HHhhhee
Q psy2839         179 TSVIGVF  185 (196)
Q Consensus       179 l~I~Gv~  185 (196)
                      ++.+-+.
T Consensus       300 lltiP~l  306 (368)
T COG0387         300 LLTIPVL  306 (368)
T ss_pred             HHHHHHH
Confidence            6655443

>KOG1397|consensus

Probab=91.77  E-value=0.29  Score=46.69  Aligned_cols=83  Identities=22%  Similarity=0.250  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHhhccccc----------cHHHHHHHhcC---------CccccceeeeeccCCchhHHHHHHHhhcCCCce
Q psy2839         107 LYMFVALAVVCDEFFVP----------SLDVIIDRLQV---------QEDVAGATFMAAGGSAPELFTSVIGVFVSFDDV  167 (196)
Q Consensus       107 lylFl~L~iva~~yfvp----------sl~~Ia~~l~I---------se~VaGaTlLA~GTSaPELftsiiAv~~g~~dI  167 (196)
                      ++-|..+++.+..|-.+          ++.-+|++++.         +++ .|..+-|....+=|++.+++|..+|+..+
T Consensus        78 lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~t-vGgllNAtfGnaiElii~ilALk~g~~ri  156 (441)
T KOG1397|consen   78 LFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPT-VGGLLNATFGNAIELIIYILALKNGKVRI  156 (441)
T ss_pred             HHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc-HHHHHhhhhccHHHHHHHHHHhhcCceEE
Confidence            33456667666655433          33334444431         233 45557788888999999999999999999


Q ss_pred             eecc--chHHHHHHHhhheeeeeec
Q psy2839         168 GIAG--GSAPELFTSVIGVFVSFDD  190 (196)
Q Consensus       168 aVGn--GSniFNil~I~Gv~~lisp  190 (196)
                      .=|+  ||-+-|+++++|++.....
T Consensus       157 Vq~SlLGSILsnlLLvlG~s~~~Gg  181 (441)
T KOG1397|consen  157 VQGSLLGSILSNLLLVLGLSLFCGG  181 (441)
T ss_pred             EehhhHHHHHHHHHHHhhHHHhhcc
Confidence            9999  9999999999999876543

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=83.30  E-value=0.47  Score=44.52  Aligned_cols=71  Identities=18%  Similarity=0.101  Sum_probs=62.9

Q ss_pred             hhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeec
Q psy2839         117 CDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDD  190 (196)
Q Consensus       117 a~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp  190 (196)
                      ++.+...+.|.+|.+.|-+   .|..++|+.-.+=|++...++..+|+..+.=++  ||-+-|++.+.|+|.++..
T Consensus        49 lA~~v~~aaE~lA~~vG~~---~G~Lina~f~~~iEvil~~~al~~G~~~lvr~Si~gsIm~~~llv~GlslllGg  121 (368)
T COG0387          49 LAFSVVRAAEVLAARVGEP---YGSLINALFGNAIEVILIVAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLLGG  121 (368)
T ss_pred             HHHHHHHHHHHHHHHhCCc---hhHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            6677899999999998865   577788888889999999999999988888888  9999999999999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.71
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.58

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.71  E-value=5.7e-19  Score=156.53  Aligned_cols=89  Identities=25%  Similarity=0.301  Sum_probs=79.1

Q ss_pred             HHHHHHHHHHHHHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHH
Q psy2839         103 ILGVLYMFVALAVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTS  180 (196)
Q Consensus       103 ll~llylFl~L~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~  180 (196)
                      +++++..+.+ .+.+++||+++++.+|+++|+||.++|+|++|+|||+||++++++|+++|+.|+++||  |||+||+++
T Consensus         6 ~~~l~~g~~~-l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nill   84 (320)
T 3v5u_A            6 VGYFLLGLIL-LYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGL   84 (320)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHH
Confidence            3334444433 4567778999999999999999999999999999999999999999999999999999  999999999


Q ss_pred             hhheeeeeeccc
Q psy2839         181 VIGVFVSFDDVG  192 (196)
Q Consensus       181 I~Gv~~lisp~~  192 (196)
                      |+|++++++|..
T Consensus        85 vlG~~~li~p~~   96 (320)
T 3v5u_A           85 VLGLSAIISPII   96 (320)
T ss_dssp             HHHHHHHHSCBC
T ss_pred             HHHHHHHHcccc
Confidence            999999998864

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.58  E-value=1.3e-16  Score=141.48  Aligned_cols=80  Identities=25%  Similarity=0.297  Sum_probs=75.2

Q ss_pred             HHHhhccccccHHHHHHHhcCCccccceeeeeccCCchhHHHHHHHhhcCCCceeecc--chHHHHHHHhhheeeeeecc
Q psy2839         114 AVVCDEFFVPSLDVIIDRLQVQEDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIAG--GSAPELFTSVIGVFVSFDDV  191 (196)
Q Consensus       114 ~iva~~yfvpsl~~Ia~~l~Ise~VaGaTlLA~GTSaPELftsiiAv~~g~~dIaVGn--GSniFNil~I~Gv~~lisp~  191 (196)
                      ...++++|+++++.+++.+|+||.++|+|++|+|||+||+++++.++++++.|+++||  |||+||+++++|+++++.|.
T Consensus       175 l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li~p~  254 (320)
T 3v5u_A          175 VLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFMHL  254 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHHSCB
T ss_pred             HHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhhccc
Confidence            4456779999999999999999999999999999999999999999999999999999  99999999999999999876


Q ss_pred             ce
Q psy2839         192 GI  193 (196)
Q Consensus       192 ~i  193 (196)
                      .+
T Consensus       255 ~~  256 (320)
T 3v5u_A          255 PA  256 (320)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00