Psyllid ID: psy2890

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890---

MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYKKNNNIESNNLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFHNDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKFDNNKNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVNIII

cccccccHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEccccEEEHHHHcHHHHHHHHHccccccHHHHHHHHHccccccccEEEEEEccccccccccccccccEEEEEccccHHHccccEEEEccccHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccEEEcccccccccEEEEcccccccccccEEEcccccHHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEccccccccccEEEccccccEEEcccEEccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccHHHHcccccEEEEEEEEccEEcEEEEEcccccHHHHHHHHHccHHHHHHHccccEEEEEEcccEEEEEc

ccccccHHHHHHHHHHHHHHcccEEEEccccccccccEEEEEcccEccccccHHHHHHHHHHHHHHHHHHccccEcccccEEEcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEcccHHEccccccHHHHHHHHHHHHHHcccEEEEEcEEcccccccEEEEccEEEcccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccEEEEEEEccccccccccccccccEEEEEcccccEcEEEEEEEccccHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHcccccccEEEccccccccEEEEEEEEEEcccccEEEEcccccHHHHHHHHHccccEEEEEEcccccccHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHccccccEEEEEcccEEccEccccccEccEEEEcccccccccHHcccEEcccccccccccHccHHHHccccccccccccccccccccHHcccEEEEEccccccccccccHHHHcccccccHcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccEEccHcEccccccccEEEEccccEEEEEcccccEEEcEEcccccEEEEEccccccccccccccHHHHHHHHcHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHcccccccccHHHHHHcccEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHcHHHHHHHcccEEEEEEEcccEEEEEc

MQKKYNFVEIEKITQCYWNKINAyqttendtrfpngkfytcsmlpypsgklhmghvrnytINDVMYRYMRMNgynvlmpmgwdafgmpaenaailnntspakwtydnVSYMKKQLSSLglaidwsreiitcspkyykWNQWIFLKMFKRGIiykktgivnwdpieKTVLANEqvingrgwrsdaiiekkkipMYYAKITNYAEELLEYVKKklpywpkkVRLMQVNWIGKSkgiflafphnikdpnknnkliqngklwifTTRIDIIYGItfcvispehpLAIFAARNNLLLQKFILEYKknnniesnNLLKKSILTQLkvlhpltnqeIKVFVVNYVIEKsygraaigvpahnkhdfyfAKKHSLLIKQVINVKnksysdkiwkdwyidkencycinsckynnmshkeatnAISTDLIklglgnkknifRLRDWAISRQrywgtpipiiycdscgsvpvpekdlpvilpetcvpnnllkenkkflhvscpkcnklafretdtmdtfvdssWYYMRYispklenfmiddnkinywmpvdqyIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIenssnkkrwynpddvkitldkknkpihailkldkkpviigGIEKmsksknngidpqtqintygadstrLFIIfsappeknlewsdigIEGAYRFLNRVWNFSYILAPRIINIInlnifhndfsvikfnnnqKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERInsetkfdnnkntnndiLLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGdilnacwpkidsLALEEEKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKyiihppkkffiipnklvniii

MQKKYNFVEIEKITQCYWNKINAYqttendtrfpnGKFYTCSMLPypsgklhmghVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLaneqvingrgwrsdaiiekkkipmYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPhnikdpnknnklIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYKKNNNIESNNLLKKSILTQLKVlhpltnqeiKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKcnklafretdtmdtFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRienssnkkrwynpddvkitldkknkpihailkldkkpviIGGIEKmsksknngidpqtqINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFHNDFSVIKFNNNQKVFRRKIHKILQQinrdikriqyntvVSGCMKIFNILERInsetkfdnnknTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIqingkfrghifvKKKCTTDFIKKIVLKNKVIQkyiihppkkffiipnklvniii

MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYKKNNNIESNNLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRiiniinlniFHNDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSEtkfdnnkntnndILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALeeekeeVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQkyiihppkkffiipnkLVNIII

****YNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYKKNNNIESNNLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIE**************QINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFHNDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKFDNNKNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVNII*

**KKYNFVEIEKITQCYWNKINA**T******FPNGKFYTCSMLPYPSGKLHMGHVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILE**************KSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRII******************NNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETK***NKNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVNIII

***KYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYKKNNNIESNNLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPNNLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLN*FHNDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINS********NTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVNIII

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		893	2.2.26 [Sep-21-2011]
A4G8E6		881	Leucine--tRNA ligase OS=H	yes	N/A	0.975	0.988	0.590	0.0
A6T239		881	Leucine--tRNA ligase OS=J	yes	N/A	0.975	0.988	0.591	0.0
Q1LJ30		873	Leucine--tRNA ligase OS=R	yes	N/A	0.965	0.987	0.548	0.0
B2UCA1		877	Leucine--tRNA ligase OS=R	yes	N/A	0.968	0.986	0.545	0.0
Q46XD8		873	Leucine--tRNA ligase OS=C	yes	N/A	0.965	0.987	0.548	0.0
Q8XVT3		877	Leucine--tRNA ligase OS=R	yes	N/A	0.968	0.986	0.544	0.0
A4SVD9		890	Leucine--tRNA ligase OS=P	yes	N/A	0.974	0.977	0.542	0.0
A3NDK5		864	Leucine--tRNA ligase OS=B	yes	N/A	0.959	0.991	0.521	0.0
Q3JNN1		864	Leucine--tRNA ligase OS=B	yes	N/A	0.959	0.991	0.521	0.0
Q63QT6		864	Leucine--tRNA ligase OS=B	yes	N/A	0.959	0.991	0.521	0.0

>sp\|A4G8E6\|SYL_HERAR Leucine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=leuS PE=3 SV=1	Back alignment and function desciption

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/901 (59%), Positives = 681/901 (75%), Gaps = 30/901 (3%)

Query: 1   MQKKYNFVEIEKITQCYWNKINAYQTTEN---DTRFPNGKFYTCSMLPYPSGKLHMGHVR 57
           MQ KY+  ++EK    +W   +AY+  E+          KFY CSMLPYPSGKLHMGHVR
Sbjct: 1   MQDKYSPADVEKSAHDHWQATDAYKAVEHAKDKNGKDKKKFYACSMLPYPSGKLHMGHVR 60

Query: 58  NYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSS 117
           NYTINDVMYRY+RMNGYNVLMPMGWDAFGMPAENAA+ NN  PA+WTY N+ +MK Q++S
Sbjct: 61  NYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANNVPPAQWTYANIEHMKTQMAS 120

Query: 118 LGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVING 177
           +GLAIDWSRE+  C P+YYKWNQW+FLKM ++GIIYKKTG VNWDPI++TVLANEQVI+G
Sbjct: 121 MGLAIDWSREMTACKPEYYKWNQWMFLKMLEKGIIYKKTGSVNWDPIDQTVLANEQVIDG 180

Query: 178 RGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLA 237
           RGWRS A+IEK++IPMYYA+IT+YAEELL++V+ KLP WP++VR MQ NWIGKS G+  A
Sbjct: 181 RGWRSGALIEKREIPMYYARITDYAEELLDHVEHKLPGWPERVRTMQANWIGKSTGVRFA 240

Query: 238 FPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFIL 297
           F H+IKD   ++KLI +GKLW+FTTR D I G+TFC ++ EHPLA FAA++N  L +FI 
Sbjct: 241 FTHDIKD---DDKLINDGKLWVFTTRADTIKGVTFCAVAAEHPLATFAAKSNPELAEFIA 297

Query: 298 EYKKNNNIESN--NLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAI-GVPAHN 354
           E K  + IE++   + KK + T L V HPLT   ++V+V NYV+  +YG  A+ GVPAH+
Sbjct: 298 ECKLGSVIEADMATMEKKGMPTGLFVKHPLTGSLVEVWVGNYVL-ITYGDGAVMGVPAHD 356

Query: 355 KHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAI 414
           + DF FA+K+ L I QVI+V+ K++S+  W DWY DKEN  CINS KY+ +++++A N I
Sbjct: 357 ERDFAFAQKYVLPIHQVIDVEGKTFSEVTWHDWYADKENGRCINSGKYDGLNYQQAVNTI 416

Query: 415 STDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCV 474
           + DL +LGLG KK  +RLRDW ISRQRYWGTPIP+I C  CG+VPVPEKDLPV+LPE CV
Sbjct: 417 AADLEELGLGEKKITYRLRDWGISRQRYWGTPIPMINCADCGAVPVPEKDLPVVLPEDCV 476

Query: 475 PN---NLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNK 531
           P+   N L +++ FL   CPKC K A RETDTMDTFVDSSWYYMRY SP   + M+ D++
Sbjct: 477 PDGSGNPLNKHEAFLKCDCPKCGKPARRETDTMDTFVDSSWYYMRYCSPNSNDAMV-DSR 535

Query: 532 INYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRI 591
            +YWMP+DQYIGGIEHA+LHLLYARFWTK+M + GL+KF+EPF  LLTQGM+LN+TYYR 
Sbjct: 536 NDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFTNLLTQGMVLNETYYR- 594

Query: 592 ENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQIN 651
           E++S KK W+NP DV++ LD K +P+ AIL  D++PV IGG EKMSKSKNNGIDPQ QI+
Sbjct: 595 EDASGKKTWFNPADVQLELDDKGRPVSAILNNDRQPVEIGGTEKMSKSKNNGIDPQAQID 654

Query: 652 TYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFHN 711
            YGAD+ RLF +F++PPE+ LEWS  G+EGA RFL RVW ++Y  + RI          +
Sbjct: 655 QYGADTARLFTMFASPPEQTLEWSGAGVEGANRFLRRVWTYAYNQSARIAAATA-----S 709

Query: 712 DFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKFDNN 771
           DFS  K ++ QK  RR++HKILQQ + D KRIQYNTVVS  MK+ N LE      K D +
Sbjct: 710 DFS--KLSDAQKTLRREVHKILQQADNDYKRIQYNTVVSAGMKMLNTLEG----AKLDES 763

Query: 772 KNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEE 831
             +N   ++ EG+SIFLR+LNP+APHITH+LW+EL ++   GDIL+A WP++D+ ALE+ 
Sbjct: 764 AASN--AVIAEGLSIFLRILNPVAPHITHVLWQELGFAKVHGDILDAAWPQVDAGALEQ- 820

Query: 832 KEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVNI 891
             E++++IQ+NGK RG I V K      I+   L N+ ++K+I   PKK  ++P KLVNI
Sbjct: 821 -AEIEMMIQVNGKLRGSIVVAKDADKATIEATALANEAVRKFIEGTPKKIIVVPGKLVNI 879

Query: 892 I 892
           +
Sbjct: 880 V 880

Herminiimonas arsenicoxydans (taxid: 204773)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 4

>sp\|A6T239\|SYL_JANMA Leucine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|Q1LJ30\|SYL_RALME Leucine--tRNA ligase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|B2UCA1\|SYL_RALPJ Leucine--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|Q46XD8\|SYL_CUPPJ Leucine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=leuS PE=3 SV=2	Back alignment and function description

>sp\|Q8XVT3\|SYL_RALSO Leucine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|A4SVD9\|SYL_POLSQ Leucine--tRNA ligase OS=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|A3NDK5\|SYL_BURP6 Leucine--tRNA ligase OS=Burkholderia pseudomallei (strain 668) GN=leuS PE=3 SV=1	Back alignment and function description

>sp\|Q3JNN1\|SYL_BURP1 Leucine--tRNA ligase OS=Burkholderia pseudomallei (strain 1710b) GN=leuS PE=3 SV=2	Back alignment and function description

>sp\|Q63QT6\|SYL_BURPS Leucine--tRNA ligase OS=Burkholderia pseudomallei (strain K96243) GN=leuS PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		893
340789040		881	leucyl-tRNA synthetase [Collimonas fungi	0.974	0.987	0.605	0.0
427400382		880	leucyl-tRNA synthetase [Massilia timonae	0.978	0.993	0.582	0.0
237747343		879	leucyl-tRNA synthetase [Oxalobacter form	0.975	0.990	0.577	0.0
399020042		881	leucyl-tRNA synthetase [Herbaspirillum s	0.974	0.987	0.588	0.0
329910003		883	Leucyl-tRNA synthetase [Oxalobacteraceae	0.974	0.985	0.586	0.0
134095829		881	leucyl-tRNA synthetase [Herminiimonas ar	0.975	0.988	0.590	0.0
152980718		881	leucyl-tRNA synthetase [Janthinobacteriu	0.975	0.988	0.591	0.0
398833535		893	leucyl-tRNA synthetase [Herbaspirillum s	0.975	0.975	0.585	0.0
409404470		882	leucyl-tRNA synthetase [Herbaspirillum s	0.975	0.987	0.587	0.0
300309930		882	leucyl-tRNA synthetase [Herbaspirillum s	0.975	0.987	0.589	0.0

>gi\|340789040\|ref\|YP_004754505.1\| leucyl-tRNA synthetase [Collimonas fungivorans Ter331] gi\|340554307\|gb\|AEK63682.1\| Leucyl-tRNA synthetase [Collimonas fungivorans Ter331]	Back alignment and taxonomy information

 Score = 1142 bits (2954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/902 (60%), Positives = 690/902 (76%), Gaps = 32/902 (3%)

Query: 1   MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNG----KFYTCSMLPYPSGKLHMGHV 56
           MQ+KY+  ++EK  Q +W+ I+AY+T E+  +  +G    KFY CSMLPYPSGKLHMGHV
Sbjct: 1   MQEKYSPTDVEKSAQDHWHAIDAYKTVEH-AKDRHGQEKKKFYACSMLPYPSGKLHMGHV 59

Query: 57  RNYTINDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLS 116
           RNYTINDVMYRY+RMNGYNVLMPMGWDAFGMPAENAA+ NN  PA+WTY N+++MKKQ+ 
Sbjct: 60  RNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANNVPPAQWTYANIAHMKKQME 119

Query: 117 SLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVIN 176
           ++GLAIDWSRE+  C+P+YYKWNQW+FLKM ++GIIYKKTG VNWDP+++TVLANEQV++
Sbjct: 120 AMGLAIDWSREMTACTPEYYKWNQWMFLKMLEQGIIYKKTGTVNWDPVDQTVLANEQVVD 179

Query: 177 GRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFL 236
           GRGWRS A+IEK++IPMYYAKIT+YAEELLE+V+ KLP WP++VRLMQ NWIGKS G+  
Sbjct: 180 GRGWRSGALIEKREIPMYYAKITDYAEELLEHVETKLPGWPERVRLMQANWIGKSTGVRF 239

Query: 237 AFPHNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFI 296
           AFPH I++   + KLIQ+GKLW+FTTR D I G+TFC ++PEH LA FAA++N  L +FI
Sbjct: 240 AFPHKIEE---DGKLIQDGKLWVFTTRADTIKGVTFCAVAPEHALATFAAKSNPELAEFI 296

Query: 297 LEYKKNNNIESN--NLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAI-GVPAH 353
            E KK + IE++   + KK + T L V HPLT Q I+V+V NYV+  +YG  A+ GVPAH
Sbjct: 297 AECKKGSVIEADMATMEKKGMPTGLYVSHPLTGQLIEVWVGNYVL-ITYGDGAVMGVPAH 355

Query: 354 NKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNA 413
           ++ DF FA+K+ L I+ VI +  K+YS++ W DWY DKEN  C++S KY+ + ++EA +A
Sbjct: 356 DERDFAFAQKYVLPIRPVIALAGKTYSEESWHDWYADKENGVCVDSGKYDGLHYQEAVDA 415

Query: 414 ISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETC 473
           ++ DL   GLG KK  +RLRDW ISRQRYWGTPIPII+C  CG VPVPEKDLPVILPE C
Sbjct: 416 VAADLAAHGLGEKKITYRLRDWGISRQRYWGTPIPIIHCADCGDVPVPEKDLPVILPEDC 475

Query: 474 VPN---NLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDN 530
           VP+   N L +++KFLHV CP+C K A RETDTMDTFVDSSWYYMRY SP   + M+ D+
Sbjct: 476 VPDGSGNPLNKHEKFLHVDCPQCGKPARRETDTMDTFVDSSWYYMRYCSPNSNDAMV-DS 534

Query: 531 KINYWMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYR 590
           + +YWMP+DQYIGGIEHA+LHLLYARFWTK+M + GL+KF+EPF  LLTQGM+LN+TY+R
Sbjct: 535 RNDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFANLLTQGMVLNETYFR 594

Query: 591 IENSSNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQI 650
            E++S KK W NP+DV++T D K +P+ AILK D KPV IGG EKMSKSKNNGIDPQ QI
Sbjct: 595 -EDASGKKTWLNPEDVELTFDDKGRPLTAILKTDGKPVEIGGTEKMSKSKNNGIDPQAQI 653

Query: 651 NTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFH 710
           + YGAD+ RLF +F++PPE+ LEWS  G+EGA RFL RVW FSY  A             
Sbjct: 654 DQYGADTARLFTMFASPPEQTLEWSGTGVEGANRFLRRVWAFSYARA-----ASIAPAAA 708

Query: 711 NDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKFDN 770
            DFS    N+ QK  RR++HKILQQ + D+KRIQYNTVVS CMK+ N LE      K D 
Sbjct: 709 ADFS--GLNDVQKTLRREVHKILQQADHDLKRIQYNTVVSACMKMLNTLE----AAKLDQ 762

Query: 771 NKNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEE 830
           +  +N   +L EG+SIFLRVLNP+APHITH LW+EL ++   GDIL+A WP++D  ALE+
Sbjct: 763 SAASN--AVLTEGLSIFLRVLNPVAPHITHALWQELGFAAVHGDILDASWPQVDGKALEQ 820

Query: 831 EKEEVKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIHPPKKFFIIPNKLVN 890
              E++++IQ+NGK RG I V K      I+   L N+ +QKY+   PKK  ++P KLVN
Sbjct: 821 --SEIEMMIQVNGKLRGSITVAKDADKASIEAAALANESVQKYLEGAPKKIIVVPGKLVN 878

Query: 891 II 892
           I+
Sbjct: 879 IV 880

Source: Collimonas fungivorans Ter331

Species: Collimonas fungivorans

Genus: Collimonas

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi\|427400382\|ref\|ZP_18891620.1\| leucyl-tRNA synthetase [Massilia timonae CCUG 45783] gi\|425720656\|gb\|EKU83575.1\| leucyl-tRNA synthetase [Massilia timonae CCUG 45783]	Back alignment and taxonomy information

>gi\|237747343\|ref\|ZP_04577823.1\| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi\|229378694\|gb\|EEO28785.1\| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]	Back alignment and taxonomy information

>gi\|399020042\|ref\|ZP_10722183.1\| leucyl-tRNA synthetase [Herbaspirillum sp. CF444] gi\|398096415\|gb\|EJL86739.1\| leucyl-tRNA synthetase [Herbaspirillum sp. CF444]	Back alignment and taxonomy information

>gi\|329910003\|ref\|ZP_08275186.1\| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi\|327546321\|gb\|EGF31342.1\| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]	Back alignment and taxonomy information

>gi\|134095829\|ref\|YP_001100904.1\| leucyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi\|166231614\|sp\|A4G8E6.1\|SYL_HERAR RecName: Full=Leucine--tRNA ligase; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS gi\|133739732\|emb\|CAL62783.1\| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Herminiimonas arsenicoxydans]	Back alignment and taxonomy information

>gi\|152980718\|ref\|YP_001354586.1\| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi\|166231615\|sp\|A6T239.1\|SYL_JANMA RecName: Full=Leucine--tRNA ligase; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS gi\|151280795\|gb\|ABR89205.1\| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]	Back alignment and taxonomy information

>gi\|398833535\|ref\|ZP_10591665.1\| leucyl-tRNA synthetase [Herbaspirillum sp. YR522] gi\|398221493\|gb\|EJN07906.1\| leucyl-tRNA synthetase [Herbaspirillum sp. YR522]	Back alignment and taxonomy information

>gi\|409404470\|ref\|ZP_11252949.1\| leucyl-tRNA synthetase [Herbaspirillum sp. GW103] gi\|386435989\|gb\|EIJ48812.1\| leucyl-tRNA synthetase [Herbaspirillum sp. GW103]	Back alignment and taxonomy information

>gi\|300309930\|ref\|YP_003774022.1\| leucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi\|300072715\|gb\|ADJ62114.1\| leucyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		893
TIGR_CMR\|CBU_0559		820	CBU_0559 "leucyl-tRNA syntheta	0.632	0.689	0.488	4.6e-198
TIGR_CMR\|CHY_0393		821	CHY_0393 "leucyl-tRNA syntheta	0.655	0.712	0.462	1.6e-169
TIGR_CMR\|GSU_2209		824	GSU_2209 "leucyl-tRNA syntheta	0.634	0.688	0.460	1.9e-168
UNIPROTKB\|P07813		860	leuS "leucyl-tRNA synthetase"	0.754	0.783	0.458	1.4e-167
TIGR_CMR\|SO_1174		859	SO_1174 "leucyl-tRNA synthetas	0.749	0.778	0.458	6.8e-166
UNIPROTKB\|Q9KTE6		858	leuS "Leucine--tRNA ligase" [V	0.744	0.775	0.465	1.2e-163
TIGR_CMR\|VC_0956		858	VC_0956 "leucyl-tRNA synthetas	0.744	0.775	0.465	1.2e-163
TIGR_CMR\|NSE_0506		831	NSE_0506 "leucyl-tRNA syntheta	0.670	0.720	0.434	2.2e-150
TIGR_CMR\|SPO_3432		852	SPO_3432 "leucyl-tRNA syntheta	0.744	0.780	0.414	2e-147
TIGR_CMR\|CJE_1234		809	CJE_1234 "leucyl-tRNA syntheta	0.645	0.711	0.436	1.4e-146

TIGR_CMR\|CBU_0559 CBU_0559 "leucyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)]	Back alignment and assigned GO terms

 Score = 1473 (523.6 bits), Expect = 4.6e-198, Sum P(2) = 4.6e-198
 Identities = 288/590 (48%), Positives = 393/590 (66%)

Query:     1 MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYT 60
             M + Y    IE++ Q YW +   ++  E+ +R    KFY  SMLPYPSG LHMGHVRNYT
Sbjct:     1 MNESYQPTLIEQLAQEYWEENETFEVKEDLSR---EKFYCLSMLPYPSGDLHMGHVRNYT 57

Query:    61 INDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGL 120
             I DV+ RY    G NVL PMGWDAFG+PAENAAI     PA+WT  N+  M+KQL  LG 
Sbjct:    58 IGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAIQRELPPAEWTRKNIKKMRKQLKQLGF 117

Query:   121 AIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGW 180
             A DWSREI TC   YY+W QW+FL+++K+G+ YKK  IVNWDP+++TVLANEQ+++GRGW
Sbjct:   118 AYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYKKNAIVNWDPVDQTVLANEQIVDGRGW 177

Query:   181 RSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPH 240
             RS A++E+++I  ++ KIT+Y+EELL+ + + L  WP++V  MQ NWIG+S+G+ + F  
Sbjct:   178 RSGAVVERREISQWFLKITDYSEELLKDLDE-LKEWPEQVITMQRNWIGQSQGVIINF-- 234

Query:   241 NI-KDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEY 299
             N+ K P+K         L ++TTR D + G+T+  I+PEHPLA   A+ +  +  F+ + 
Sbjct:   235 NLEKGPDK---------LQVYTTRPDTLMGVTYLAIAPEHPLAKERAKKSKKIAAFLKKC 285

Query:   300 KKNNNIESNNLL--KKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAIGVPAHNKHD 357
             K+    E++     K+ I + L  +HPL+ +++ +++ N+V+ +      + VPAH++ D
Sbjct:   286 KQTRVAEADIATQEKEGIDSGLFAVHPLSKEKLPIWIANFVLMEYASGVVMAVPAHDERD 345

Query:   358 FYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTD 417
               FA K+ L +K VI   +    D   +  Y +      INS  +N++  K A N I+  
Sbjct:   346 HEFALKYDLPLKPVIEPADGHDWDYN-QAAYTNPGKL--INSGSFNDIDSKTAFNVIADY 402

Query:   418 LIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPN- 476
             L   G G+++  +RLRDW ISRQRYWGTPIPIIYC +CG+VPVPE  LPV+LPE  +P  
Sbjct:   403 LKNNGAGSRQTHYRLRDWGISRQRYWGTPIPIIYCKTCGTVPVPENQLPVLLPEDIIPTG 462

Query:   477 --NLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINY 534
               + LKE   F    CP CNK A RETDTMDTFV+SSWYY RY  P  +  M+DD +  Y
Sbjct:   463 HGSPLKETASFYKTRCPVCNKPATRETDTMDTFVESSWYYARYSCPDQDKVMLDD-RAKY 521

Query:   535 WMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMIL 584
             W PVDQYIGGIEHA++HLLYARF  K++ +LGL+  NEPFIRLLTQGM+L
Sbjct:   522 WTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRLLTQGMVL 571

GO:0004823 "leucine-tRNA ligase activity" evidence=ISS

GO:0006429 "leucyl-tRNA aminoacylation" evidence=ISS

TIGR_CMR\|CHY_0393 CHY_0393 "leucyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_2209 GSU_2209 "leucyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

UNIPROTKB\|P07813 leuS "leucyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_1174 SO_1174 "leucyl-tRNA synthetase" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KTE6 leuS "Leucine--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

TIGR_CMR\|VC_0956 VC_0956 "leucyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]	Back alignment and assigned GO terms

TIGR_CMR\|NSE_0506 NSE_0506 "leucyl-tRNA synthetase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_3432 SPO_3432 "leucyl-tRNA synthetase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TIGR_CMR\|CJE_1234 CJE_1234 "leucyl-tRNA synthetase" [Campylobacter jejuni RM1221 (taxid:195099)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A3NDK5	SYL_BURP6	6, ., 1, ., 1, ., 4	0.5211	0.9596	0.9918	yes	N/A
Q63QT6	SYL_BURPS	6, ., 1, ., 1, ., 4	0.5211	0.9596	0.9918	yes	N/A
Q7VWY7	SYL_BORPE	6, ., 1, ., 1, ., 4	0.5149	0.9776	0.9864	yes	N/A
C5CJ85	SYL_VARPS	6, ., 1, ., 1, ., 4	0.5038	0.9720	0.9908	yes	N/A
A1VTV4	SYL_POLNA	6, ., 1, ., 1, ., 4	0.5302	0.9764	0.9819	yes	N/A
A1WCP8	SYL_ACISJ	6, ., 1, ., 1, ., 4	0.5129	0.9820	0.9637	yes	N/A
A9HWW6	SYL_BORPD	6, ., 1, ., 1, ., 4	0.5160	0.9776	0.9864	yes	N/A
B1YTA7	SYL_BURA4	6, ., 1, ., 1, ., 4	0.5233	0.9596	0.9918	yes	N/A
Q3SG58	SYL_THIDA	6, ., 1, ., 1, ., 4	0.4789	0.9473	0.9871	yes	N/A
Q220P5	SYL_RHOFD	6, ., 1, ., 1, ., 4	0.5220	0.9820	0.9831	yes	N/A
B1XXY5	SYL_LEPCP	6, ., 1, ., 1, ., 4	0.5060	0.9753	0.9819	yes	N/A
A0K4I0	SYL_BURCH	6, ., 1, ., 1, ., 4	0.5276	0.9552	0.9872	yes	N/A
Q8XVT3	SYL_RALSO	6, ., 1, ., 1, ., 4	0.5448	0.9686	0.9863	yes	N/A
Q7WH33	SYL_BORBR	6, ., 1, ., 1, ., 4	0.5149	0.9776	0.9864	yes	N/A
A6T239	SYL_JANMA	6, ., 1, ., 1, ., 4	0.5915	0.9753	0.9886	yes	N/A
A4JBI1	SYL_BURVG	6, ., 1, ., 1, ., 4	0.5265	0.9552	0.9872	yes	N/A
A2SC91	SYL_METPP	6, ., 1, ., 1, ., 4	0.4961	0.9675	0.9632	yes	N/A
A3MPH9	SYL_BURM7	6, ., 1, ., 1, ., 4	0.52	0.9596	0.9918	yes	N/A
Q1BZ70	SYL_BURCA	6, ., 1, ., 1, ., 4	0.5276	0.9552	0.9872	yes	N/A
Q7W9M4	SYL_BORPA	6, ., 1, ., 1, ., 4	0.5138	0.9776	0.9864	yes	N/A
B1XT72	SYL_POLNS	6, ., 1, ., 1, ., 4	0.5378	0.9742	0.9775	yes	N/A
Q0BIB5	SYL_BURCM	6, ., 1, ., 1, ., 4	0.5243	0.9552	0.9872	yes	N/A
A1V0G7	SYL_BURMS	6, ., 1, ., 1, ., 4	0.5188	0.9596	0.9918	yes	N/A
B2JGX6	SYL_BURP8	6, ., 1, ., 1, ., 4	0.5255	0.9596	0.9918	yes	N/A
A3NZB6	SYL_BURP0	6, ., 1, ., 1, ., 4	0.5211	0.9596	0.9918	yes	N/A
Q46XD8	SYL_CUPPJ	6, ., 1, ., 1, ., 4	0.5486	0.9652	0.9873	yes	N/A
A1WGU0	SYL_VEREI	6, ., 1, ., 1, ., 4	0.4961	0.9843	0.9691	yes	N/A
Q62H20	SYL_BURMA	6, ., 1, ., 1, ., 4	0.5188	0.9596	0.9918	yes	N/A
Q9HX33	SYL_PSEAE	6, ., 1, ., 1, ., 4	0.4834	0.9619	0.9839	yes	N/A
Q13U82	SYL_BURXL	6, ., 1, ., 1, ., 4	0.5277	0.9585	0.9918	yes	N/A
A1TVU7	SYL_ACIAC	6, ., 1, ., 1, ., 4	0.5136	0.9820	0.9777	yes	N/A
B9MH67	SYL_ACIET	6, ., 1, ., 1, ., 4	0.5129	0.9820	0.9637	yes	N/A
Q3JNN1	SYL_BURP1	6, ., 1, ., 1, ., 4	0.5211	0.9596	0.9918	yes	N/A
A2S5J4	SYL_BURM9	6, ., 1, ., 1, ., 4	0.52	0.9596	0.9918	yes	N/A
A9C1G8	SYL_DELAS	6, ., 1, ., 1, ., 4	0.5053	0.9832	0.9637	yes	N/A
A9AHA9	SYL_BURM1	6, ., 1, ., 1, ., 4	0.5309	0.9552	0.9872	yes	N/A
Q1LJ30	SYL_RALME	6, ., 1, ., 1, ., 4	0.5486	0.9652	0.9873	yes	N/A
B7V9C9	SYL_PSEA8	6, ., 1, ., 1, ., 4	0.4834	0.9619	0.9839	yes	N/A
B4EEW1	SYL_BURCJ	6, ., 1, ., 1, ., 4	0.5276	0.9552	0.9872	yes	N/A
Q2SZ91	SYL_BURTA	6, ., 1, ., 1, ., 4	0.5233	0.9596	0.9918	yes	N/A
Q122Q4	SYL_POLSJ	6, ., 1, ., 1, ., 4	0.5288	0.9820	0.9898	yes	N/A
Q5P252	SYL_AROAE	6, ., 1, ., 1, ., 4	0.4800	0.9675	0.9896	yes	N/A
B2UCA1	SYL_RALPJ	6, ., 1, ., 1, ., 4	0.5459	0.9686	0.9863	yes	N/A
A4G8E6	SYL_HERAR	6, ., 1, ., 1, ., 4	0.5904	0.9753	0.9886	yes	N/A
A6V0C2	SYL_PSEA7	6, ., 1, ., 1, ., 4	0.4856	0.9619	0.9839	yes	N/A
Q02SF5	SYL_PSEAB	6, ., 1, ., 1, ., 4	0.4845	0.9619	0.9839	yes	N/A
A4SVD9	SYL_POLSQ	6, ., 1, ., 1, ., 4	0.5422	0.9742	0.9775	yes	N/A
Q39JM5	SYL_BURS3	6, ., 1, ., 1, ., 4	0.5244	0.9596	0.9918	yes	N/A
Q2KXE5	SYL_BORA1	6, ., 1, ., 1, ., 4	0.5232	0.9787	0.9875	yes	N/A
B1JVG9	SYL_BURCC	6, ., 1, ., 1, ., 4	0.5276	0.9552	0.9872	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	6.1.1.4	0.946
3rd Layer	6.1.1	0.963

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		893
PRK00390		805	PRK00390, leuS, leucyl-tRNA synthetase; Validated	0.0
TIGR00396		842	TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba	0.0
COG0495		814	COG0495, LeuS, Leucyl-tRNA synthetase [Translation	0.0
PLN02563		963	PLN02563, PLN02563, aminoacyl-tRNA ligase	0.0
cd00812		314	cd00812, LeuRS_core, catalytic core domain of leuc	1e-68
TIGR00422		861	TIGR00422, valS, valyl-tRNA synthetase	1e-62
cd00812		314	cd00812, LeuRS_core, catalytic core domain of leuc	4e-47
pfam13603		178	pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase,	3e-46
pfam00133		606	pfam00133, tRNA-synt_1, tRNA synthetases class I (	2e-43
cd00817		382	cd00817, ValRS_core, catalytic core domain of valy	3e-38
PRK13208		800	PRK13208, valS, valyl-tRNA synthetase; Reviewed	3e-36
COG0525		877	COG0525, ValS, Valyl-tRNA synthetase [Translation,	2e-34
cd07958		117	cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding d	4e-32
COG0525		877	COG0525, ValS, Valyl-tRNA synthetase [Translation,	5e-32
COG0060		933	COG0060, IleS, Isoleucyl-tRNA synthetase [Translat	1e-30
TIGR00392		861	TIGR00392, ileS, isoleucyl-tRNA synthetase	2e-30
cd00668		312	cd00668, Ile_Leu_Val_MetRS_core, catalytic core do	7e-29
pfam09334		388	pfam09334, tRNA-synt_1g, tRNA synthetases class I	1e-23
COG0143		558	COG0143, MetG, Methionyl-tRNA synthetase [Translat	2e-22
cd00814		319	cd00814, MetRS_core, catalytic core domain of meth	3e-22
TIGR00395		938	TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch	7e-21
PRK06039		975	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe	3e-20
COG0060		933	COG0060, IleS, Isoleucyl-tRNA synthetase [Translat	4e-20
cd00817		382	cd00817, ValRS_core, catalytic core domain of valy	5e-20
PRK12300		897	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	6e-20
TIGR00392		861	TIGR00392, ileS, isoleucyl-tRNA synthetase	1e-19
cd00818		338	cd00818, IleRS_core, catalytic core domain of isol	3e-18
PLN02381		1066	PLN02381, PLN02381, valyl-tRNA synthetase	6e-18
PRK12268		556	PRK12268, PRK12268, methionyl-tRNA synthetase; Rev	6e-17
PRK05729		874	PRK05729, valS, valyl-tRNA synthetase; Reviewed	2e-16
TIGR00398		530	TIGR00398, metG, methionyl-tRNA synthetase	6e-16
cd00818		338	cd00818, IleRS_core, catalytic core domain of isol	2e-15
PRK11893		511	PRK11893, PRK11893, methionyl-tRNA synthetase; Rev	2e-15
PTZ00419		995	PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro	7e-15
PRK13208		800	PRK13208, valS, valyl-tRNA synthetase; Reviewed	2e-14
PLN02843		974	PLN02843, PLN02843, isoleucyl-tRNA synthetase	1e-13
pfam08264		148	pfam08264, Anticodon_1, Anticodon-binding domain o	2e-13
PRK14900		1052	PRK14900, valS, valyl-tRNA synthetase; Provisional	2e-13
PRK12300		897	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	3e-12
PRK14900		1052	PRK14900, valS, valyl-tRNA synthetase; Provisional	3e-11
PRK06039		975	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe	6e-11
PRK13208		800	PRK13208, valS, valyl-tRNA synthetase; Reviewed	2e-10
PRK12267		648	PRK12267, PRK12267, methionyl-tRNA synthetase; Rev	2e-10
PRK13804		961	PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi	2e-10
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	4e-10
PRK05729		874	PRK05729, valS, valyl-tRNA synthetase; Reviewed	5e-10
PLN02943		958	PLN02943, PLN02943, aminoacyl-tRNA ligase	6e-10
PRK05729		874	PRK05729, valS, valyl-tRNA synthetase; Reviewed	7e-10
PRK05743		912	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe	1e-09
PRK06039		975	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe	4e-09
PRK00133		673	PRK00133, metG, methionyl-tRNA synthetase; Reviewe	1e-08
TIGR00395		938	TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch	5e-08
TIGR00398		530	TIGR00398, metG, methionyl-tRNA synthetase	1e-07
PRK05743		912	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe	2e-06
cd00668		312	cd00668, Ile_Leu_Val_MetRS_core, catalytic core do	1e-05
COG0143		558	COG0143, MetG, Methionyl-tRNA synthetase [Translat	1e-05
cd00814		319	cd00814, MetRS_core, catalytic core domain of meth	1e-05
PRK05743		912	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe	1e-05
PRK11893		511	PRK11893, PRK11893, methionyl-tRNA synthetase; Rev	2e-05
PTZ00427		1205	PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati	2e-05
PRK13804		961	PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi	4e-05
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	4e-05
pfam09334		388	pfam09334, tRNA-synt_1g, tRNA synthetases class I	7e-05
PLN02959		1084	PLN02959, PLN02959, aminoacyl-tRNA ligase	1e-04
PRK13804		961	PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi	3e-04
COG0525		877	COG0525, ValS, Valyl-tRNA synthetase [Translation,	4e-04
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	4e-04
PLN02843		974	PLN02843, PLN02843, isoleucyl-tRNA synthetase	8e-04
PRK12267		648	PRK12267, PRK12267, methionyl-tRNA synthetase; Rev	8e-04
PRK05729		874	PRK05729, valS, valyl-tRNA synthetase; Reviewed	0.003
PTZ00427		1205	PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati	0.004
PRK00260		463	PRK00260, cysS, cysteinyl-tRNA synthetase; Validat	0.004
cd00671		212	cd00671, ArgRS_core, catalytic core domain of argi	0.004

>gnl\|CDD\|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated	Back alignment and domain information

 Score = 1147 bits (2971), Expect = 0.0
 Identities = 400/900 (44%), Positives = 553/900 (61%), Gaps = 103/900 (11%)

Query: 1   MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGKLHMGHVRNYT 60
           M ++YN  EIEK  Q YW +   ++TTE+ ++    K+Y   M PYPSG LHMGHVRNYT
Sbjct: 1   MMERYNPKEIEKKWQKYWEENKTFKTTEDSSK----KYYVLDMFPYPSGGLHMGHVRNYT 56

Query: 61  INDVMYRYMRMNGYNVLMPMGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGL 120
           I DV+ RY RM GYNVL PMGWDAFG+PAENAAI   T PA+WTY+N++ MKKQL SLG 
Sbjct: 57  IGDVIARYKRMQGYNVLHPMGWDAFGLPAENAAIKTGTHPAEWTYENIANMKKQLKSLGF 116

Query: 121 AIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIVNWDPIEKTVLANEQVINGRGW 180
           + DWSREI TC P+YYKW QWIFLK++++G+ Y+K   VNW P++ TVLANEQVI+GR W
Sbjct: 117 SYDWSREIATCDPEYYKWTQWIFLKLYEKGLAYRKESPVNWCPVDGTVLANEQVIDGRCW 176

Query: 181 RSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFPH 240
           R  A +EKK++  ++ KIT+YA+ELL+ +  KL  WP+KV+ MQ NWIG+S+G  + F  
Sbjct: 177 RCGAPVEKKELRQWFLKITDYADELLDDL-DKLEDWPEKVKTMQRNWIGRSEGAEVTFKV 235

Query: 241 NIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAARNNLLLQKFILEYK 300
              D           K+ +FTTR D ++G T+ V++PEHPL    A  N  +  FI E K
Sbjct: 236 EDSD----------EKIEVFTTRPDTLFGATYLVLAPEHPLVEKLAEQNPAVAAFIEECK 285

Query: 301 KNNNIE--SNNLLKKSILTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAAI-GVPAHNKHD 357
           K +++E  +    K  + T L  +HPLT ++I V++ +YV+   YG  A+  VPAH++ D
Sbjct: 286 KKSDLERQTETKEKTGVFTGLYAIHPLTGEKIPVWIADYVLM-DYGTGAVMAVPAHDQRD 344

Query: 358 FYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENCYCINSCKYNNMSHKEATNAISTD 417
           F FAKK+ L IK VI  +     + I ++ Y        INS + + +  +EA  AI   
Sbjct: 345 FEFAKKYGLPIKPVI--EPGDGDEDISEEAYTGDG--VLINSGELDGLDSEEAKEAIIAW 400

Query: 418 LIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCGSVPVPEKDLPVILPETCVPN- 476
           L + GLG +K  +RLRDW ISRQRYWG PIPII+C+ CG VPVPE+DLPV+LPE  VP+ 
Sbjct: 401 LEEKGLGKRKVNYRLRDWGISRQRYWGEPIPIIHCEDCGIVPVPEEDLPVVLPEDVVPDG 460

Query: 477 --NLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINY 534
             + L ++ ++++V+CPKC K A RETDTMDTFV SSWYY+RY  P  +    D    NY
Sbjct: 461 TGSPLAKHPEWVNVTCPKCGKPARRETDTMDTFVGSSWYYLRYTDPHNDEAPFDKEAANY 520

Query: 535 WMPVDQYIGGIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILNKTYYRIENS 594
           W+PVDQYIGGIEHA+LHLLYARF+TK++ +LGL+  +EPF +LLTQGM+           
Sbjct: 521 WLPVDQYIGGIEHAVLHLLYARFFTKVLRDLGLVSSDEPFKKLLTQGMV----------- 569

Query: 595 SNKKRWYNPDDVKITLDKKNKPIHAILKLDKKPVIIGGIEKMSKSKNNGIDPQTQINTYG 654
                                                   KMSKSK N +DP   I  YG
Sbjct: 570 ----------------------------------------KMSKSKGNVVDPDDIIEKYG 589

Query: 655 ADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNRVWNFSYILAPRIINIINLNIFHNDFS 714
           AD+ RLF +F+ PPEK+LEWSD G+EGAYRFL RVW            +           
Sbjct: 590 ADTARLFEMFAGPPEKDLEWSDSGVEGAYRFLQRVWRLVVDAKGEAGAL----------- 638

Query: 715 VIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKFDNNKNT 774
            +   +  K  RRK+HK ++++  DI+R+++NT ++  M++ N L +          ++ 
Sbjct: 639 DVAALSEDKELRRKLHKTIKKVTEDIERLRFNTAIAALMELVNALYKA---------EDE 689

Query: 775 NNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEE 834
            +  +L E + I +R+L P APH+   LW++L +   +G I NA WP  D  AL E  +E
Sbjct: 690 QDKAVLREALEILVRLLAPFAPHLAEELWEKLGH---EGSIANAPWPTADEAALVE--DE 744

Query: 835 VKLIIQINGKFRGHIFVKKKCTTDFIKKIVLKNKVIQKYIIH-PPKKFFIIPNKLVNIII 893
           V +++Q+NGK RG I V    + + I+ + L ++ +QK++     KK  ++P KLVNI++
Sbjct: 745 VTIVVQVNGKVRGKIEVPADASKEEIEALALADEKVQKFLEGKTIKKVIVVPGKLVNIVV 804

Length = 805

>gnl\|CDD\|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>gnl\|CDD\|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|232969 TIGR00422, valS, valyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2	Back alignment and domain information

>gnl\|CDD\|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V)	Back alignment and domain information

>gnl\|CDD\|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|153412 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M)	Back alignment and domain information

>gnl\|CDD\|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>gnl\|CDD\|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|215214 PLN02381, PLN02381, valyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|232957 TIGR00398, metG, methionyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA	Back alignment and domain information

>gnl\|CDD\|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>gnl\|CDD\|232957 TIGR00398, metG, methionyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>gnl\|CDD\|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M)	Back alignment and domain information

>gnl\|CDD\|215518 PLN02959, PLN02959, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>gnl\|CDD\|234705 PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		893
PLN02563		963	aminoacyl-tRNA ligase	100.0
TIGR00396		842	leuS_bact leucyl-tRNA synthetase, eubacterial and	100.0
KOG0435\|consensus		876		100.0
PRK00390		805	leuS leucyl-tRNA synthetase; Validated	100.0
COG0495		814	LeuS Leucyl-tRNA synthetase [Translation, ribosoma	100.0
COG0525		877	ValS Valyl-tRNA synthetase [Translation, ribosomal	100.0
PRK06039		975	ileS isoleucyl-tRNA synthetase; Reviewed	100.0
PTZ00419		995	valyl-tRNA synthetase-like protein; Provisional	100.0
PRK05743		912	ileS isoleucyl-tRNA synthetase; Reviewed	100.0
PLN02381		1066	valyl-tRNA synthetase	100.0
COG0060		933	IleS Isoleucyl-tRNA synthetase [Translation, ribos	100.0
PRK13208		800	valS valyl-tRNA synthetase; Reviewed	100.0
PRK14900		1052	valS valyl-tRNA synthetase; Provisional	100.0
PTZ00427		1205	isoleucine-tRNA ligase, putative; Provisional	100.0
PLN02943		958	aminoacyl-tRNA ligase	100.0
TIGR00422		861	valS valyl-tRNA synthetase. The valyl-tRNA synthet	100.0
PRK05729		874	valS valyl-tRNA synthetase; Reviewed	100.0
TIGR00392		861	ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA	100.0
PLN02882		1159	aminoacyl-tRNA ligase	100.0
PRK13804		961	ileS isoleucyl-tRNA synthetase; Provisional	100.0
PLN02843		974	isoleucyl-tRNA synthetase	100.0
KOG0432\|consensus		995		100.0
TIGR00395		938	leuS_arch leucyl-tRNA synthetase, archaeal and cyt	100.0
PLN02959		1084	aminoacyl-tRNA ligase	100.0
PRK12300		897	leuS leucyl-tRNA synthetase; Reviewed	100.0
PF00133		601	tRNA-synt_1: tRNA synthetases class I (I, L, M and	100.0
KOG0433\|consensus		937		100.0
KOG0434\|consensus		1070		100.0
PRK12267		648	methionyl-tRNA synthetase; Reviewed	100.0
PRK12268		556	methionyl-tRNA synthetase; Reviewed	100.0
PLN02224		616	methionine-tRNA ligase	100.0
TIGR00398		530	metG methionyl-tRNA synthetase. The methionyl-tRNA	100.0
cd00817		382	ValRS_core catalytic core domain of valyl-tRNA syn	100.0
PRK00133		673	metG methionyl-tRNA synthetase; Reviewed	100.0
PLN02610		801	probable methionyl-tRNA synthetase	100.0
PRK11893		511	methionyl-tRNA synthetase; Reviewed	100.0
COG0143		558	MetG Methionyl-tRNA synthetase [Translation, ribos	100.0
cd00818		338	IleRS_core catalytic core domain of isoleucyl-tRNA	100.0
KOG0437\|consensus		1080		100.0
KOG0436\|consensus		578		100.0
cd00812		314	LeuRS_core catalytic core domain of leucyl-tRNA sy	100.0
PF09334		391	tRNA-synt_1g: tRNA synthetases class I (M); InterP	100.0
cd00814		319	MetRS_core catalytic core domain of methioninyl-tR	100.0
cd00668		312	Ile_Leu_Val_MetRS_core catalytic core domain of is	100.0
KOG1247\|consensus		567		100.0
PRK00260		463	cysS cysteinyl-tRNA synthetase; Validated	100.0
TIGR00435		465	cysS cysteinyl-tRNA synthetase. This model finds t	100.0
PTZ00399		651	cysteinyl-tRNA-synthetase; Provisional	100.0
PRK12418		384	cysteinyl-tRNA synthetase; Provisional	100.0
TIGR03447		411	mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-	100.0
PRK14535		699	cysS cysteinyl-tRNA synthetase; Provisional	100.0
PLN02946		557	cysteine-tRNA ligase	100.0
PF13603		185	tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P	100.0
PRK14536		490	cysS cysteinyl-tRNA synthetase; Provisional	100.0
PRK14534		481	cysS cysteinyl-tRNA synthetase; Provisional	100.0
COG0215		464	CysS Cysteinyl-tRNA synthetase [Translation, ribos	100.0
PF01406		300	tRNA-synt_1e: tRNA synthetases class I (C) catalyt	99.97
KOG2007\|consensus		586		99.97
cd00672		213	CysRS_core catalytic core domain of cysteinyl tRNA	99.97
PRK01611		507	argS arginyl-tRNA synthetase; Reviewed	99.96
cd00674		353	LysRS_core_class_I catalytic core domain of class	99.95
PRK00750		510	lysK lysyl-tRNA synthetase; Reviewed	99.89
TIGR00456		566	argS arginyl-tRNA synthetase. This model recognize	99.87
cd07961		183	Anticodon_Ia_Ile_ABEc Anticodon-binding domain of	99.85
TIGR00467		515	lysS_arch lysyl-tRNA synthetase, archaeal and spir	99.78
COG0018		577	ArgS Arginyl-tRNA synthetase [Translation, ribosom	99.76
cd07960		180	Anticodon_Ia_Ile_BEm Anticodon-binding domain of b	99.76
cd00671		212	ArgRS_core catalytic core domain of arginyl-tRNA s	99.75
PRK12451		562	arginyl-tRNA synthetase; Reviewed	99.73
PLN02286		576	arginine-tRNA ligase	99.65
PF08264		153	Anticodon_1: Anticodon-binding domain of tRNA; Int	99.63
cd07959		117	Anticodon_Ia_Leu_AEc Anticodon-binding domain of a	99.62
cd07958		117	Anticodon_Ia_Leu_BEm Anticodon-binding domain of b	99.62
cd07962		135	Anticodon_Ia_Val Anticodon-binding domain of valyl	99.49
PF00750		354	tRNA-synt_1d: tRNA synthetases class I (R); InterP	99.43
cd00802		143	class_I_aaRS_core catalytic core domain of class I	99.4
cd07957		129	Anticodon_Ia_Met Anticodon-binding domain of methi	99.37
PF01921		360	tRNA-synt_1f: tRNA synthetases class I (K); InterP	98.97
cd07375		117	Anticodon_Ia_like Anticodon-binding domain of clas	98.92
COG1384		521	LysS Lysyl-tRNA synthetase (class I) [Translation,	98.77
cd09287		240	GluRS_non_core catalytic core domain of non-discri	98.46
PRK04156		567	gltX glutamyl-tRNA synthetase; Provisional	98.14
TIGR00463		560	gltX_arch glutamyl-tRNA synthetase, archaeal and e	98.06
TIGR03838		272	queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe	98.01
PRK12558		445	glutamyl-tRNA synthetase; Provisional	97.92
PTZ00402		601	glutamyl-tRNA synthetase; Provisional	97.89
TIGR00440		522	glnS glutaminyl-tRNA synthetase. This protein is a	97.89
PLN02907		722	glutamate-tRNA ligase	97.87
PLN03233		523	putative glutamate-tRNA ligase; Provisional	97.85
cd00807		238	GlnRS_core catalytic core domain of glutaminyl-tRN	97.84
PF00749		314	tRNA-synt_1c: tRNA synthetases class I (E and Q),	97.83
PRK05347		554	glutaminyl-tRNA synthetase; Provisional	97.81
PTZ00437		574	glutaminyl-tRNA synthetase; Provisional	97.8
COG0008		472	GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr	97.78
PRK14703		771	glutaminyl-tRNA synthetase/YqeY domain fusion prot	97.75
PRK05710		299	glutamyl-Q tRNA(Asp) synthetase; Reviewed	97.73
PRK12410		433	glutamylglutaminyl-tRNA synthetase; Provisional	97.67
TIGR00464		470	gltX_bact glutamyl-tRNA synthetase, bacterial fami	97.63
cd00418		230	GlxRS_core catalytic core domain of glutamyl-tRNA	97.63
PRK01406		476	gltX glutamyl-tRNA synthetase; Reviewed	97.56
PRK14895		513	gltX glutamyl-tRNA synthetase; Provisional	97.56
PLN02859		788	glutamine-tRNA ligase	97.48
PLN02627		535	glutamyl-tRNA synthetase	97.38
cd00808		239	GluRS_core catalytic core domain of discriminating	97.13
KOG4426\|consensus		656		97.11
KOG1147\|consensus		712		96.98
KOG1195\|consensus		567		96.49
TIGR00422		861	valS valyl-tRNA synthetase. The valyl-tRNA synthet	96.05
PRK14900		1052	valS valyl-tRNA synthetase; Provisional	96.04
PRK06039		975	ileS isoleucyl-tRNA synthetase; Reviewed	95.97
cd07956		156	Anticodon_Ia_Arg Anticodon-binding domain of argin	95.82
PRK05729		874	valS valyl-tRNA synthetase; Reviewed	95.81
PRK13208		800	valS valyl-tRNA synthetase; Reviewed	95.74
KOG1148\|consensus		764		95.63
TIGR00392		861	ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA	95.45
PLN02882		1159	aminoacyl-tRNA ligase	94.95
PLN02943		958	aminoacyl-tRNA ligase	94.74
PTZ00427		1205	isoleucine-tRNA ligase, putative; Provisional	94.7
PRK05743		912	ileS isoleucyl-tRNA synthetase; Reviewed	94.64
PTZ00419		995	valyl-tRNA synthetase-like protein; Provisional	94.4
COG0060		933	IleS Isoleucyl-tRNA synthetase [Translation, ribos	94.4
PF00133		601	tRNA-synt_1: tRNA synthetases class I (I, L, M and	94.27
PRK13804		961	ileS isoleucyl-tRNA synthetase; Provisional	93.84
TIGR00395		938	leuS_arch leucyl-tRNA synthetase, archaeal and cyt	93.7
cd00395		273	Tyr_Trp_RS_core catalytic core domain of tyrosinyl	93.46
PLN02843		974	isoleucyl-tRNA synthetase	93.36
KOG1149\|consensus		524		93.01
PF00579		292	tRNA-synt_1b: tRNA synthetases class I (W and Y);	92.83
cd00805		269	TyrRS_core catalytic core domain of tyrosinyl-tRNA	92.76
PRK04156		567	gltX glutamyl-tRNA synthetase; Provisional	92.6
PLN02381		1066	valyl-tRNA synthetase	91.88
COG0525		877	ValS Valyl-tRNA synthetase [Translation, ribosomal	91.83
PRK12282		333	tryptophanyl-tRNA synthetase II; Reviewed	91.72
cd00802		143	class_I_aaRS_core catalytic core domain of class I	90.97
PRK12300		897	leuS leucyl-tRNA synthetase; Reviewed	90.69
PRK08560		329	tyrosyl-tRNA synthetase; Validated	90.17
PRK13354		410	tyrosyl-tRNA synthetase; Provisional	89.8
PRK12285		368	tryptophanyl-tRNA synthetase; Reviewed	89.77
PRK05912		408	tyrosyl-tRNA synthetase; Validated	89.4
PRK12556		332	tryptophanyl-tRNA synthetase; Provisional	89.18
PLN02486		383	aminoacyl-tRNA ligase	88.45
TIGR00233		328	trpS tryptophanyl-tRNA synthetase. This model repr	88.28
PLN02959		1084	aminoacyl-tRNA ligase	87.29
COG1656		165	Uncharacterized conserved protein [Function unknow	87.22
cd00418		230	GlxRS_core catalytic core domain of glutamyl-tRNA	86.91
PRK12284		431	tryptophanyl-tRNA synthetase; Reviewed	86.67
PTZ00126		383	tyrosyl-tRNA synthetase; Provisional	86.48
PRK00927		333	tryptophanyl-tRNA synthetase; Reviewed	86.47
cd00395		273	Tyr_Trp_RS_core catalytic core domain of tyrosinyl	86.37
cd00806		280	TrpRS_core catalytic core domain of tryptophanyl-t	86.32
cd00806		280	TrpRS_core catalytic core domain of tryptophanyl-t	81.65
PRK12283		398	tryptophanyl-tRNA synthetase; Reviewed	80.22

>PLN02563 aminoacyl-tRNA ligase	Back alignment and domain information

Probab=100.00  E-value=1.1e-188  Score=1702.09  Aligned_cols=848  Identities=37%  Similarity=0.679  Sum_probs=747.6

Q ss_pred             CCCCCCchHHHHHHHHHHHhCCCcccCCCCCCCCCCcEEEEecCCCCCCc-CcchHHHhHHHHHHHHHHHHHcCCccccc
Q psy2890           1 MQKKYNFVEIEKITQCYWNKINAYQTTENDTRFPNGKFYTCSMLPYPSGK-LHMGHVRNYTINDVMYRYMRMNGYNVLMP   79 (893)
Q Consensus         1 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~~~~i~~~~P~~nG~-lHiGH~~~~~~~Di~~R~~r~~G~~V~~~   79 (893)
                      |.+.|||.+||++||++|+++++|+...+.+ .++++|||++|||||||. |||||+++|+++|+++||+||+||+|+|+
T Consensus        76 ~~~~y~~~~iE~kwq~~W~e~~~f~~~~~~~-~~k~k~~v~~~~PYpnG~~lHiGH~~~y~~~DviaRy~Rm~G~~Vl~~  154 (963)
T PLN02563         76 AKRAYPFHEIEPKWQRYWEENRTFRTPDDVD-TSKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARYKRMQGYNVLHP  154 (963)
T ss_pred             cCCCCCHHHHHHHHHHHHHhCCCcccccccc-CCCCCEEEEeCCCCCCCcccchhhHHHHHHHHHHHHHHHhcCCeeccc
Confidence            4568999999999999999999999765211 237889999999999997 99999999999999999999999999999


Q ss_pred             cccccccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCcccccCccccCChhhHHHHHHHHHHHHhcCcceeeceee
Q psy2890          80 MGWDAFGMPAENAAILNNTSPAKWTYDNVSYMKKQLSSLGLAIDWSREIITCSPKYYKWNQWIFLKMFKRGIIYKKTGIV  159 (893)
Q Consensus        80 ~G~D~~G~pie~~a~~~g~~~~~~~~~~~~~~~~~l~~lgi~~Dw~~~~~T~~~~~~~~v~~~f~~L~~~Gliy~~~~~v  159 (893)
                      +|||+||+|||++|++.|.+|.+++.++++.|+++|++||+++||++++.|++|.|++++||+|.+|+++||||++.++|
T Consensus       155 ~G~D~~GlPiE~~a~~~g~~p~~~~~~~i~~~~~q~~~lG~s~DW~r~~~T~dp~y~~~~q~~F~~L~~~GliY~~~~~v  234 (963)
T PLN02563        155 MGWDAFGLPAEQYAIETGTHPKITTLKNIARFRSQLKSLGFSYDWDREISTTEPEYYKWTQWIFLQLLKRGLAYQAEVPV  234 (963)
T ss_pred             ccccccCcHHHHHHHHcCCChHHhHHHHHHHHHHHHHHhCcEeeCCCCeecCCHHHHHHHHHHHHHHHHCCCEEeeeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCcccccchhccCcccCCCcccEEEeeceeeEEecchHHHHHHHHHhhCCCChHHHHHHHHhhcccccceeeeec
Q psy2890         160 NWDPIEKTVLANEQVINGRGWRSDAIIEKKKIPMYYAKITNYAEELLEYVKKKLPYWPKKVRLMQVNWIGKSKGIFLAFP  239 (893)
Q Consensus       160 ~~~~~~~t~l~~~ev~~g~c~~~~~~v~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~wi~~s~~~~i~f~  239 (893)
                      +|||.|+|+||++||++|+|++||.+++.+++.||||+|++|+++|+++| +.++ ||++++.||+||||||.|++|+|+
T Consensus       235 ~wcp~~~T~La~~Ev~~~~~~~~~~~~~~~~~~q~f~~it~ya~~L~~~l-~~~~-wp~~v~~~q~nwiG~s~g~~i~F~  312 (963)
T PLN02563        235 NWCPALGTVLANEEVVDGLSERGGHPVIRKPMRQWMLKITAYADRLLEDL-DDLD-WPESIKEMQRNWIGRSEGAELDFS  312 (963)
T ss_pred             eecCCcCCCCCHHHhhcCCCcCCCCceEEEecceeEEecchhHHHHHHhh-hhcC-CCHHHHHHHHHhccccceEEEEEE
Confidence            99999999999999999999999999999999999999999999999999 8886 999999999999999999999999


Q ss_pred             cccCCCCCCccccCCcEEEEEeccccccccccEEEECCCChHHHHHhh--chHHHHHHHHHHhhcCcccc--cccccccc
Q psy2890         240 HNIKDPNKNNKLIQNGKLWIFTTRIDIIYGITFCVISPEHPLAIFAAR--NNLLLQKFILEYKKNNNIES--NNLLKKSI  315 (893)
Q Consensus       240 ~~~~~~~~~~~~~~~~~l~v~Tt~p~tl~g~~~v~v~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~g~  315 (893)
                      +.++..     ...+.+|+|||||||||+|++||||||+|+|+..+..  .+..+.+|++........++  ....+.|.
T Consensus       313 ~~~~~~-----~~~~~~l~V~TTrPeTl~g~t~iav~p~~~yv~~~~~~~~~~~v~~y~~~~~~~~~~~~~~~~~~k~g~  387 (963)
T PLN02563        313 VLDGEG-----KERDEKITVYTTRPDTLFGATYLVVAPEHPLLSSLTTAEQKEAVEEYVDAASRKSDLERTELQKEKTGV  387 (963)
T ss_pred             ecCccc-----cCCCCEEEEEeCCChHHhhccEEEECCCChhhHhhhcccchHHHHHHHHHHhchhHHhhhhccceeccc
Confidence            863210     0013589999999999999999999999999977643  34456677765443332222  12346788


Q ss_pred             ccceEEEcCCCCCeeeEEEecccccCCCCCcc-ccCCCCCHHHHHHHHHcCCceeeeecCCCCCccccccccccccCCcc
Q psy2890         316 LTQLKVLHPLTNQEIKVFVVNYVIEKSYGRAA-IGVPAHNKHDFYFAKKHSLLIKQVINVKNKSYSDKIWKDWYIDKENC  394 (893)
Q Consensus       316 ~~g~~~~~P~~~~~ipv~~~~~V~~~~~GTG~-~~~Pah~~~D~~~~~~~~l~~~~vi~~~~g~~~~~~~~~~~~~~g~~  394 (893)
                      ++|.++.||++|+++||+.++||+ +++|||| |+|||||++||+||++||||+++||++.++.. +.. +++|+++|+ 
T Consensus       388 ~~g~~~~~P~~~~~iPI~~ad~V~-~~~GTGaVm~~PaHd~~D~~~a~k~~Lpi~~vI~~~d~~~-~~~-~~~y~~~G~-  463 (963)
T PLN02563        388 FTGSYAINPATGEAIPIWVADYVL-GSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKPADGNE-DDA-EKAYTGEGV-  463 (963)
T ss_pred             ccCcEEeccCCCCeeEEEEecccC-CCCCCCeEEEcCCCCHHHHHHHHHcCCCceeeeccCcccc-ccc-cccccCcee-
Confidence            999999999999999999999999 9999999 99999999999999999999999996511210 011 367888999 


Q ss_pred             ccccCCC----CCCCCHHHHHHHHHHHHHHcCCCCeeeEeeecceeeccccccCCccCeEEcCCCC-eeecCCCCCCccC
Q psy2890         395 YCINSCK----YNNMSHKEATNAISTDLIKLGLGNKKNIFRLRDWAISRQRYWGTPIPIIYCDSCG-SVPVPEKDLPVIL  469 (893)
Q Consensus       395 ~~~~s~~----~~gl~~~~a~~~i~~~L~~~~~~~~~~~~~l~DW~ISRQr~WG~pIPi~~~~~~~-~v~v~~~~lpv~l  469 (893)
                       |+||+.    |+||++.+|+++|++.|++.|+++++++|+|||||||||||||+|||+|||++|| .+++++++||+.|
T Consensus       464 -l~ns~~~~~~~~Gl~~~eA~~~Ii~~L~~~g~~~~~v~y~lrDW~ISRQRyWG~PIPi~~c~~cg~~v~v~e~~Lpv~l  542 (963)
T PLN02563        464 -IVNSSSSGLDINGLSSKEAAKKVIEWLEETGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLEDSGEPVPVPESDLPLTL  542 (963)
T ss_pred             -EecCCCcccccCCcCHHHHHHHHHHHHHhCCCCCCeeEecCCCceEeeecccCCceEEEEEcCCCcEEecchHhCcccc
Confidence             999987    9999999999999999999999999999999999999999999999999999988 7889999999999


Q ss_pred             CCc--cCC---C-CcccccccccccccCCCCccceecCCcccccccccchhhhhcCCCccccCCChhhhhccCCceeeec
Q psy2890         470 PET--CVP---N-NLLKENKKFLHVSCPKCNKLAFRETDTMDTFVDSSWYYMRYISPKLENFMIDDNKINYWMPVDQYIG  543 (893)
Q Consensus       470 p~~--~~~---g-~~l~~~~~~~~~~c~~~g~~~~re~d~~D~WfdSsw~~~~~~~p~~~~~~~~~~~~~~~~PvD~~ig  543 (893)
                      |+.  +.+   | +||...++|+++.||+||++++||+|||||||||||||++|++|++++.+|+++.+++|+|||+|+|
T Consensus       543 pe~~~~~~~~~g~~pl~~~~~~~~~~~p~cg~~~~RetDtmDtw~~Sswy~~r~~~p~~~~~~~~~~~~~~w~PvD~yig  622 (963)
T PLN02563        543 PELDDFTPTGTGEPPLAKAVSWVNTVDPSSGKPARRETNTMPQWAGSCWYYLRFMDPKNSNALVDKEKEKYWMPVDLYVG  622 (963)
T ss_pred             hhhhhcccCCCCCCchhcchhhhcCcCcCCCCCcEECCCcCCchhhccHHHHHHhCCCccccccCHHHHhCcCCCcEeec
Confidence            953  333   3 5888889999999999999999999999999999999999999999999999988999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCccCCCccceeeecceEec----eeeeecccCCCCccccCCCcccccccCCCCc---
Q psy2890         544 GIEHAILHLLYARFWTKLMYNLGLIKFNEPFIRLLTQGMILN----KTYYRIENSSNKKRWYNPDDVKITLDKKNKP---  616 (893)
Q Consensus       544 G~D~~i~Hl~y~rf~~~~l~~~g~~~~~~Pfk~l~~~G~v~~----~~~~~~d~~~G~~~~~~~~~v~~~~~~~g~~---  616 (893)
                      |.||+|+||+|+|||+++|.++|++.+++||++|++||||++    .+|+  | .+|+  |+++++|+......+..   
T Consensus       623 G~dhailHLlY~Rfw~~~l~~~g~~~~~ePfk~ll~qGmVl~~~~~~~~~--d-~~G~--~~~~~~~~~~~~~~~~~~~~  697 (963)
T PLN02563        623 GAEHAVLHLLYARFWHKVLYDIGVVSTKEPFQCLVNQGMILGEVEYTAFK--D-SDGE--YVSADTADRLGELQQEKIPE  697 (963)
T ss_pred             cHHHHhhHhHHHHHHHHHHHHhhccCCcccHHHHhccceeecCcccccee--c-CCCc--Cccccccccccccccccccc
Confidence            999999999999999999999999999999999999999998    4565  6 7886  77766554221100000   


Q ss_pred             -------cceeeecCCCcc-eeccccccccCCCCccCccchhhhhCchhHHHHHHhcCCCCCCcccChhhhhHHHHHHHH
Q psy2890         617 -------IHAILKLDKKPV-IIGGIEKMSKSKNNGIDPQTQINTYGADSTRLFIIFSAPPEKNLEWSDIGIEGAYRFLNR  688 (893)
Q Consensus       617 -------~~~~~~~~g~~~-~~~~~~KMSKSkgN~i~p~~ii~~yGaD~lRl~ll~~~~~~~d~~~~~~~i~~~~~~l~r  688 (893)
                             ...++ .+|..+ +.++++||||||||+|+|+++|++||||++|||+|+++|++++++|+++++++++||++|
T Consensus       698 ~~~~~~~~~~~~-~~~~~~~~~~~~eKMSKSKGNvVdP~eiI~kYGADaLRl~ll~~ap~~dd~~w~~~~V~g~~rfL~r  776 (963)
T PLN02563        698 EKVIKSGDSFVL-KDDPSIRLIARAHKMSKSRGNVVNPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTSGVEGVHRFLGR  776 (963)
T ss_pred             cccccccccccc-ccCCcccccccccccccccCCcCCHHHHHHHcCcHHHHHHHHhCCCcccccccCHHHHHHHHHHHHH
Confidence                   12233 445433 356668999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhccccccccccccCCccccCCChhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhccccc
Q psy2890         689 VWNFSYILAPRIINIINLNIFHNDFSVIKFNNNQKVFRRKIHKILQQINRDIKRIQYNTVVSGCMKIFNILERINSETKF  768 (893)
Q Consensus       689 l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~il~~l~~~i~~v~~~~e~~~f~~ai~~l~~fvn~l~~~~k~~~~  768 (893)
                      +||++..... ..  ..+...    ........|+|++++++.++++|+++|++|+|++|++.+|+|+|.+++..     
T Consensus       777 lwn~~~~~~~-~~--~~~~~~----~~~~~~~~d~~ll~kl~~~ikkVte~~e~y~FntAi~~lmef~n~l~~~~-----  844 (963)
T PLN02563        777 TWRLVVGAPL-PD--GSFRDG----TVVTDEEPSLEQLRLLHKCIAKVTEEIESTRFNTAISAMMEFTNAAYKWD-----  844 (963)
T ss_pred             HHHHHHHhhh-cc--cccCcc----ccccCCcchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCch-----
Confidence            9999876521 00  011000    00111246899999999999999999999999999999999999886420     


Q ss_pred             CCCCCcccHHHHHHHHHHHHHHhcccccchHHHHHHHhhccCCCCCeeeccCCCCChhhhhhHHHHHHHHHHhhhhcceE
Q psy2890         769 DNNKNTNNDILLYEGMSIFLRVLNPIAPHITHILWKELKYSIQQGDILNACWPKIDSLALEEEKEEVKLIIQINGKFRGH  848 (893)
Q Consensus       769 ~~~~~~~~~~~l~~~l~~ll~LL~P~~P~isEEIwq~L~~~~~~~sI~~~~wP~~d~~~~~~~~~~~~~vv~i~gk~R~~  848 (893)
                               ..+.++++.+++||+|||||+|||||+.|+.   .+||+.++||++++.++.  +++++++||||||+|++
T Consensus       845 ---------~~~~~~l~~ll~LLaPf~PhiaEELW~~Lg~---~~sv~~~~WP~~d~~~l~--~~~~~~~vqiNGK~r~~  910 (963)
T PLN02563        845 ---------KVPREAIEPFVLLLSPYAPHLAEELWFRLGH---SNSLAYEPWPEANPSYLV--DDTVVLPVQINGKTRGT  910 (963)
T ss_pred             ---------HHHHHHHHHHHHHHHhhhhhHHHHHHHHcCC---CCeeeeCCCCCCCHHHhh--cCceEEEEEECCEEeeE
Confidence                     1567899999999999999999999999986   679999999999999988  78899999999999999


Q ss_pred             EEecCCCCHHHHHHHHhhChhHHHHhcC-CCEEEEEeCCCeEEEeC
Q psy2890         849 IFVKKKCTTDFIKKIVLKNKVIQKYIIH-PPKKFFIIPNKLVNIII  893 (893)
Q Consensus       849 ~~v~~~~~~e~i~~~~~~~~~v~k~l~~-~i~kvi~vp~klvn~v~  893 (893)
                      ++|+.++++|+++++|++++.++++|.| +|+|+||||+||||||+
T Consensus       911 i~v~~~~~~~~i~~~a~~~~~v~~~l~~k~i~K~I~vp~kivNiV~  956 (963)
T PLN02563        911 IEVEEGCSEDDAFALASQDEKLSKYLDGKEIKKRIYVPGKILNVIL  956 (963)
T ss_pred             EEeCCCCCHHHHHHHHhcCHHHHHHhCCCCceEEEEECCcEEEEEe
Confidence            9999999999999999999999999999 99999999999999996

>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>KOG0435\|consensus	Back alignment and domain information

>PRK00390 leuS leucyl-tRNA synthetase; Validated	Back alignment and domain information

>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PTZ00419 valyl-tRNA synthetase-like protein; Provisional	Back alignment and domain information

>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02381 valyl-tRNA synthetase	Back alignment and domain information

>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK13208 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK14900 valS valyl-tRNA synthetase; Provisional	Back alignment and domain information

>PTZ00427 isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>PLN02943 aminoacyl-tRNA ligase	Back alignment and domain information

>TIGR00422 valS valyl-tRNA synthetase	Back alignment and domain information

>PRK05729 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>TIGR00392 ileS isoleucyl-tRNA synthetase	Back alignment and domain information

>PLN02882 aminoacyl-tRNA ligase	Back alignment and domain information

>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02843 isoleucyl-tRNA synthetase	Back alignment and domain information

>KOG0432\|consensus	Back alignment and domain information

>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>PLN02959 aminoacyl-tRNA ligase	Back alignment and domain information

>PRK12300 leuS leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>KOG0433\|consensus	Back alignment and domain information

>KOG0434\|consensus	Back alignment and domain information

>PRK12267 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK12268 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02224 methionine-tRNA ligase	Back alignment and domain information

>TIGR00398 metG methionyl-tRNA synthetase	Back alignment and domain information

>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>PRK00133 metG methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02610 probable methionyl-tRNA synthetase	Back alignment and domain information

>PRK11893 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>KOG0437\|consensus	Back alignment and domain information

>KOG0436\|consensus	Back alignment and domain information

>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases	Back alignment and domain information

>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>KOG1247\|consensus	Back alignment and domain information

>PRK00260 cysS cysteinyl-tRNA synthetase; Validated	Back alignment and domain information

>TIGR00435 cysS cysteinyl-tRNA synthetase	Back alignment and domain information

>PTZ00399 cysteinyl-tRNA-synthetase; Provisional	Back alignment and domain information

>PRK12418 cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	Back alignment and domain information

>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02946 cysteine-tRNA ligase	Back alignment and domain information

>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A	Back alignment and domain information

>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>KOG2007\|consensus	Back alignment and domain information

>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase	Back alignment and domain information

>PRK01611 argS arginyl-tRNA synthetase; Reviewed	Back alignment and domain information

>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase	Back alignment and domain information

>PRK00750 lysK lysyl-tRNA synthetase; Reviewed	Back alignment and domain information

>TIGR00456 argS arginyl-tRNA synthetase	Back alignment and domain information

>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases	Back alignment and domain information

>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete	Back alignment and domain information

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases	Back alignment and domain information

>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases	Back alignment and domain information

>PRK12451 arginyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02286 arginine-tRNA ligase	Back alignment and domain information

>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases	Back alignment and domain information

>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases	Back alignment and domain information

>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases	Back alignment and domain information

>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase	Back alignment and domain information

>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases	Back alignment and domain information

>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains	Back alignment and domain information

>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase	Back alignment and domain information

>PRK04156 gltX glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family	Back alignment and domain information

>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase	Back alignment and domain information

>PRK12558 glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>PTZ00402 glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00440 glnS glutaminyl-tRNA synthetase	Back alignment and domain information

>PLN02907 glutamate-tRNA ligase	Back alignment and domain information

>PLN03233 putative glutamate-tRNA ligase; Provisional	Back alignment and domain information

>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase	Back alignment and domain information

>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PRK05347 glutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>PTZ00437 glutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional	Back alignment and domain information

>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed	Back alignment and domain information

>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family	Back alignment and domain information

>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase	Back alignment and domain information

>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK14895 gltX glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02859 glutamine-tRNA ligase	Back alignment and domain information

>PLN02627 glutamyl-tRNA synthetase	Back alignment and domain information

>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase	Back alignment and domain information

>KOG4426\|consensus	Back alignment and domain information

>KOG1147\|consensus	Back alignment and domain information

>KOG1195\|consensus	Back alignment and domain information

>TIGR00422 valS valyl-tRNA synthetase	Back alignment and domain information

>PRK14900 valS valyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases	Back alignment and domain information

>PRK05729 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK13208 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>KOG1148\|consensus	Back alignment and domain information

>TIGR00392 ileS isoleucyl-tRNA synthetase	Back alignment and domain information

>PLN02882 aminoacyl-tRNA ligase	Back alignment and domain information

>PLN02943 aminoacyl-tRNA ligase	Back alignment and domain information

>PTZ00427 isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PTZ00419 valyl-tRNA synthetase-like protein; Provisional	Back alignment and domain information

>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase	Back alignment and domain information

>PLN02843 isoleucyl-tRNA synthetase	Back alignment and domain information

>KOG1149\|consensus	Back alignment and domain information

>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase	Back alignment and domain information

>PRK04156 gltX glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02381 valyl-tRNA synthetase	Back alignment and domain information

>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed	Back alignment and domain information

>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase	Back alignment and domain information

>PRK12300 leuS leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK08560 tyrosyl-tRNA synthetase; Validated	Back alignment and domain information

>PRK13354 tyrosyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK12285 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK05912 tyrosyl-tRNA synthetase; Validated	Back alignment and domain information

>PRK12556 tryptophanyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02486 aminoacyl-tRNA ligase	Back alignment and domain information

>TIGR00233 trpS tryptophanyl-tRNA synthetase	Back alignment and domain information

>PLN02959 aminoacyl-tRNA ligase	Back alignment and domain information

>COG1656 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase	Back alignment and domain information

>PRK12284 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PTZ00126 tyrosyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK00927 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase	Back alignment and domain information

>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase	Back alignment and domain information

>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase	Back alignment and domain information

>PRK12283 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		893
4aq7_A		880	Ternary Complex Of E. Coli Leucyl-Trna Synthetase,		0.0
1obh_A		878	Leucyl-Trna Synthetase From Thermus Thermophilus Co		1e-177
2v0c_A		878	Leucyl-Trna Synthetase From Thermus Thermophilus Co		1e-176
3ziu_A		637	Crystal Structure Of Mycoplasma Mobile Leucyl-trna		1e-47
3ziu_A		637	Crystal Structure Of Mycoplasma Mobile Leucyl-trna		8e-39
1wz2_A		967	The Crystal Structure Of Leucyl-Trna Synthetase And		3e-23
1wkb_A		810	Crystal Structure Of Leucyl-Trna Synthetase From Th		3e-23
2ajg_A		196	Crystal Structure Of The Editing Domain Of E. Coli		3e-21
1jzq_A		821	Isoleucyl-Trna Synthetase Complexed With Isoleucyl-		4e-20
1qu2_A		917	Insights Into Editing From An Ile-Trna Synthetase S		2e-18
3o0a_A		219	Crystal Structure Of The Wild Type Cp1 Hydrolitic D		1e-14
3pz0_A		221	The Crystal Structure Of Aaleurs-Cp1 Length = 221		1e-12
1gax_A		862	Crystal Structure Of Thermus Thermophilus Valyl-Trn		2e-12
3pz5_A		201	The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2		4e-12
4dlp_A		536	Crystal Structure Of Methionyl-Trna Synthetase Metr		3e-10
1rqg_A		722	Methionyl-Trna Synthetase From Pyrococcus Abyssi Le		2e-09
2x1l_A		524	Crystal Structure Of Mycobacterium Smegmatis Methio		6e-08
2csx_A		497	Crystal Structure Of Aquifex Aeolicus Methionyl-Trn		1e-07
3kfl_A		564	Leishmania Major Methionyl-Trna Synthetase In Compl		2e-06
3tun_A		542	Trypanosoma Brucei Methionyl-Trna Synthetase In Com		7e-06
4eg5_A		542	Trypanosoma Brucei Methionyl-Trna Synthetase In Com		1e-05
4eg1_A		542	Trypanosoma Brucei Methionyl-Trna Synthetase In Com		1e-05
1p7p_A		551	Methionyl-trna Synthetase From Escherichia Coli Com		1e-05
1qqt_A		551	Methionyl-Trna Synthetase From Escherichia Coli Len		2e-05
1f4l_A		551	Crystal Structure Of The E.Coli Methionyl-Trna Synt		2e-05
3h9c_A		547	Structure Of Methionyl-Trna Synthetase: Crystal For		2e-05
1woy_A		500	Crystal Structure Of Methionyl Trna Synthetase Y225		3e-05
1a8h_A		500	Methionyl-Trna Synthetase From Thermus Thermophilus		4e-05
2d54_A		502	Crystal Structure Of Methionyl Trna Synthetase Y225		4e-05
3h97_A		560	Structure Of A Mutant Methionyl-trna Synthetase Wit		8e-05

>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880