Psyllid ID: psy2930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 293 | 2.2.26 [Sep-21-2011] | |||||||
| Q5ZK82 | 398 | Metallophosphoesterase 1 | yes | N/A | 0.955 | 0.703 | 0.463 | 9e-78 | |
| D2I2M6 | 392 | Metallophosphoesterase 1 | yes | N/A | 0.945 | 0.706 | 0.489 | 1e-77 | |
| Q53F39 | 396 | Metallophosphoesterase 1 | yes | N/A | 0.959 | 0.709 | 0.464 | 2e-75 | |
| Q0IHA5 | 405 | Metallophosphoesterase 1 | N/A | N/A | 0.969 | 0.701 | 0.468 | 2e-75 | |
| Q9GMS6 | 396 | Metallophosphoesterase 1 | N/A | N/A | 0.952 | 0.704 | 0.468 | 6e-75 | |
| C7G3A0 | 391 | Metallophosphoesterase 1 | yes | N/A | 0.945 | 0.708 | 0.475 | 1e-74 | |
| Q5RET5 | 397 | Metallophosphoesterase 1 | yes | N/A | 0.959 | 0.707 | 0.456 | 9e-74 | |
| Q80XL7 | 396 | Metallophosphoesterase 1 | yes | N/A | 0.938 | 0.694 | 0.465 | 4e-73 | |
| Q9VLR9 | 370 | Metallophosphoesterase 1 | yes | N/A | 0.972 | 0.770 | 0.476 | 5e-73 | |
| B1WC86 | 394 | Metallophosphoesterase 1 | yes | N/A | 0.945 | 0.703 | 0.457 | 2e-72 |
| >sp|Q5ZK82|MPPE1_CHICK Metallophosphoesterase 1 OS=Gallus gallus GN=MPPE1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 290 bits (742), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 203/300 (67%), Gaps = 20/300 (6%)
Query: 1 CNWP-----------ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAV 49
C WP +P S+ +KA+F+ADTHLLG +GHW DKLRREWQM ++FQTA+
Sbjct: 47 CRWPDVKRDAHTGNEETPASV--LKAMFLADTHLLGEIKGHWLDKLRREWQMERSFQTAL 104
Query: 50 ALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109
L QP+ +F+LGD+ DEG++ + + + VRRF +F P TEL V+ GNHD+GFHY +
Sbjct: 105 WLLQPDIVFILGDVFDEGKWDSPQAWADDVRRFQKMFKYPVTTELVVIVGNHDIGFHYEM 164
Query: 110 HPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
Y RF + FN + KL++ KG+ FVL+NS+A+EGDGC LC+ A+ ++ +S +L C
Sbjct: 165 TTYKVHRFEKVFNFTSGKLITRKGTNFVLVNSVAMEGDGCTLCRTAEAKLVALSHRLNCS 224
Query: 170 RKD-----RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWEC 224
++ + C + K + SQPI+LQH+PLYR+SD ECSG D+AP EK F+++++
Sbjct: 225 LQEPNHPQKRCSDAEKPPA-SQPILLQHYPLYRKSDAECSGEDAAPPEEKNIPFKEKYDV 283
Query: 225 ISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVV 284
+S+E++ LL + PRL++ GHTH+ C H G + E ++PSFSWRN+NNPSF+MG +
Sbjct: 284 LSQEASQKLLWWFRPRLILSGHTHSACQVLHT-GGIPEISIPSFSWRNRNNPSFIMGSIT 342
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Gallus gallus (taxid: 9031) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|D2I2M6|MPPE1_AILME Metallophosphoesterase 1 OS=Ailuropoda melanoleuca GN=MPPE1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/290 (48%), Positives = 192/290 (66%), Gaps = 13/290 (4%)
Query: 1 CNWP-----ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP AS +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QPE
Sbjct: 49 CDWPEVKTPASDSGQKTLKAMFLADTHLLGEVRGHWLDKLRREWQMERAFQTALRLLQPE 108
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + V RF +F P +L VV GNHD+GFHY+++ Y
Sbjct: 109 VVFILGDIFDEGKWSSSQAWADDVERFQKIFRHPRHVQLKVVAGNHDIGFHYQMNAYKIK 168
Query: 116 RFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE- 174
RF + F+ +L S KG FV++NS+ALEGDGC +C A+ + IS KL C RK
Sbjct: 169 RFEKVFSPE--RLFSWKGINFVMVNSVALEGDGCHICSEAEAELIEISRKLNCSRKQERR 226
Query: 175 ---CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231
CP L + S P++LQHFPLYR SD CSG D+AP E+ F++R++ +S+E++
Sbjct: 227 SGPCPDPQLLPA-SAPVLLQHFPLYRRSDANCSGEDAAPLEERGIPFKERYDVLSQEASQ 285
Query: 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRL++ GHTH+ C H +V E +VPSFSWRN+NNPSF+MG
Sbjct: 286 QLLWWLRPRLILSGHTHSACEVLHG-AEVPEISVPSFSWRNRNNPSFIMG 334
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Ailuropoda melanoleuca (taxid: 9646) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q53F39|MPPE1_HUMAN Metallophosphoesterase 1 OS=Homo sapiens GN=MPPE1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 193/295 (65%), Gaps = 14/295 (4%)
Query: 1 CNWPASPESINN---------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL 51
CNWP + ++ +KA+F+ADTHLLG F GHW DKLRREWQM + FQTA+ L
Sbjct: 49 CNWPEVKTTASDGEQTTREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWL 108
Query: 52 HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHP 111
QPE +F+LGD+ DEG++ E + + V RF +F P +L VV GNHD+GFHY ++
Sbjct: 109 LQPEVVFILGDIFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNT 168
Query: 112 YLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171
Y +RF + F+S +L S KG FV++NS+AL GDGC +C + + +S +L C R+
Sbjct: 169 YKVERFEKVFSSE--RLFSWKGINFVMVNSVALNGDGCGICSETEAELIEVSHRLNCSRE 226
Query: 172 DRECPKS--MKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKES 229
R + L S P++LQH+PLYR SD CSG D+AP E+ F++ ++ +S+E+
Sbjct: 227 ARGSSRCGPGPLLPTSAPVLLQHYPLYRRSDANCSGEDAAPAEERDIPFKENYDVLSREA 286
Query: 230 TDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVV 284
+ LL +L PRLV+ GHTH+ C +H G+V E +VPSFSWRN+NNPSF+MG +
Sbjct: 287 SQKLLWWLQPRLVLSGHTHSACEVHHG-GRVPELSVPSFSWRNRNNPSFIMGSIT 340
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q0IHA5|MPPE1_XENLA Metallophosphoesterase 1 OS=Xenopus laevis GN=mppe1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 201/303 (66%), Gaps = 19/303 (6%)
Query: 1 CNWPA-----SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP +S +K +F+ADTHLLG RGHW DKLRREWQM +++Q+A+ L QP+
Sbjct: 54 CSWPEVKGAHKEDSTPVLKVMFLADTHLLGEIRGHWLDKLRREWQMERSYQSALWLLQPD 113
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + V RF +F P T+L V+ GNHD+GFHY + Y
Sbjct: 114 IVFILGDVFDEGKWSIPQAWSSDVARFQKMFRHPPHTQLIVLVGNHDIGFHYDMTVYKLS 173
Query: 116 RFSRAFNSSMVKLLSIKG------SYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
RF + FN + KL+S KG S FVL+NSMALEGD C +C+ A+D++ IS KL C
Sbjct: 174 RFEKTFNFTSGKLVSPKGINHILSSSFVLLNSMALEGDDCHICRAAEDQLRRISIKLNCS 233
Query: 170 RKDRECP------KSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWE 223
R RE P K+++ S PI+LQH+PLYR SD EC+G DSA EK+ F+++++
Sbjct: 234 RM-REHPDFQKKCKNVEKTPVSAPILLQHYPLYRISDSECTGEDSASPEEKKVLFKEKYD 292
Query: 224 CISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
+S+++++ LL L PRL++ GHTH+ C H GK+ E +VPSFSWRN+NNPSF+MG +
Sbjct: 293 VLSQDASEKLLQLLQPRLILSGHTHSACEVLHQ-GKIPEISVPSFSWRNRNNPSFIMGSI 351
Query: 284 VEN 286
Sbjct: 352 TAT 354
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9GMS6|MPPE1_MACFA Metallophosphoesterase 1 OS=Macaca fascicularis GN=MPPE1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 195/297 (65%), Gaps = 18/297 (6%)
Query: 1 CNWP-----------ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAV 49
CNWP AS E + +KA+F+ADTHLLG F GHW DKLRREWQM + QTA+
Sbjct: 49 CNWPEVKTTAYDGEQASHEPV--LKAMFLADTHLLGEFLGHWLDKLRREWQMERALQTAL 106
Query: 50 ALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109
L QPE +F+LGD+ DEG++ E + + V RF +F P +L VV GNHD+GFHY +
Sbjct: 107 WLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEM 166
Query: 110 HPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
+ Y +RF + F+S +L S KG FV++NS+A+ GDGC +C A+ + +S +L C
Sbjct: 167 NTYKVERFEKVFSSE--RLFSWKGINFVMVNSVAMNGDGCGICSEAEAELIEVSHRLNCS 224
Query: 170 RKDRECPKS--MKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
R+ R + L S P++LQH+PLYR SD CSG D+AP E+ F++ ++ +S+
Sbjct: 225 REARGSRRCGPGPLLPVSAPVLLQHYPLYRRSDANCSGDDAAPPEERDIPFKENYDVLSR 284
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVV 284
E++ LL +L PRLV+ GHTH+ C +H G+V E++VPSFSWRN+NNPSF+MG +
Sbjct: 285 EASQKLLWWLQPRLVLSGHTHSACEVHHG-GRVPEFSVPSFSWRNRNNPSFIMGSIT 340
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Macaca fascicularis (taxid: 9541) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|C7G3A0|MPPE1_CRIGR Metallophosphoesterase 1 OS=Cricetulus griseus GN=MPPE1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 279 bits (714), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 190/290 (65%), Gaps = 13/290 (4%)
Query: 1 CNWPASPESINN------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQP 54
C+WP + +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ QP
Sbjct: 47 CHWPEVKTLAHGDRQKPVLKAMFLADTHLLGEIRGHWLDKLRREWQMERAFQTALWWLQP 106
Query: 55 EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLN 114
E IF+LGD+ DEG++ E + + V+RF +F +L VV GNHD+GFHY++ Y
Sbjct: 107 EVIFILGDIFDEGKWSTTEAWADDVQRFRKIFRHGSHVQLKVVIGNHDIGFHYQMSKYRI 166
Query: 115 DRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK--- 171
RF + F+S +L S KG FV++NS+A+EGDGC +C A+ + IS KL C R+
Sbjct: 167 KRFEKVFSSE--RLFSWKGVNFVMVNSVAMEGDGCSICSEAEAELREISRKLNCSREVQG 224
Query: 172 DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231
+C +L +S P++LQH+PLYR SD CSG D+AP E+ F ++++ +S+E++
Sbjct: 225 SSQCEGEQRL-PFSAPVLLQHYPLYRASDANCSGEDAAPPEERNVPFEEKYDVLSREASQ 283
Query: 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRLV+ GHTH+ C H G V E +VPSFSWRN+NNPSF+MG
Sbjct: 284 KLLWWLQPRLVLSGHTHSACEVLHP-GGVPEVSVPSFSWRNRNNPSFIMG 332
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Cricetulus griseus (taxid: 10029) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q5RET5|MPPE1_PONAB Metallophosphoesterase 1 OS=Pongo abelii GN=MPPE1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 15/296 (5%)
Query: 1 CNWPASPESINN---------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL 51
CNWP + ++ +KA+F+ADTHLLG GHW DKLRREWQM + FQTA+ L
Sbjct: 49 CNWPEVKTTASDGEQATREPVLKAMFLADTHLLGEVLGHWPDKLRREWQMERAFQTALWL 108
Query: 52 HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHP 111
QPE +F+LGD+ DEG++ E + N V RF +F P +L VV GNHD+GFHY ++
Sbjct: 109 LQPEVVFILGDIFDEGKWSTPEAWVNDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNT 168
Query: 112 YLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171
Y +RF + F+S +L S KG FV++NS+AL GDGC +C + + +S +L C R+
Sbjct: 169 YKVERFEKVFSSE--RLFSWKGINFVMVNSVALNGDGCGICSETEAELIEVSHRLNCSRE 226
Query: 172 DRECPKSMKLGSY---SQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKE 228
G S P++LQH+PLYR SD CSG D+AP E+ F++ ++ +S+E
Sbjct: 227 QARGSSRCGPGPLLPMSAPVLLQHYPLYRRSDANCSGEDAAPPEERDIPFKENYDVLSRE 286
Query: 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVV 284
++ LL + PRLV+ GHTH+ C +H G+V E +VPSFSWRN+NNPSF+MG +
Sbjct: 287 ASQKLLRWFQPRLVLSGHTHSACEVHHG-GRVPELSVPSFSWRNRNNPSFIMGSIT 341
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q80XL7|MPPE1_MOUSE Metallophosphoesterase 1 OS=Mus musculus GN=Mppe1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 190/294 (64%), Gaps = 19/294 (6%)
Query: 1 CNWPASPESINN------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQP 54
C+WP + +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QP
Sbjct: 50 CHWPEVKTLAHGGRQEPVLKAMFLADTHLLGEIRGHWLDKLRREWQMERAFQTALWLLQP 109
Query: 55 EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLN 114
E +F+LGD+ DEG++ + + + V+RF +F +L VV GNHD+GFHY++ Y
Sbjct: 110 EVVFILGDIFDEGKWSSDQAWADDVQRFQRMFRHDSHVQLKVVIGNHDVGFHYQMSKYRI 169
Query: 115 DRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK--- 171
RF + F S +LLS+KG FV++NS+A+EGDGC +C + + IS KL C ++
Sbjct: 170 KRFEKVFGSE--RLLSLKGVNFVMVNSVAMEGDGCIICSEEEAELREISRKLNCSQEVPG 227
Query: 172 ----DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
DRE + L S P++LQH+PLYR SD CSG D+AP E+ F ++++ +S+
Sbjct: 228 SSQCDREPEPRLPL---SAPVLLQHYPLYRASDANCSGEDAAPPEERNVPFEEKYDVLSR 284
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
E++ LL +L PRLV+ GHTH+ C H G E +VPSFSWRN+NNPSF+MG
Sbjct: 285 EASQKLLWWLRPRLVLSGHTHSACEVLHP-GGAPEVSVPSFSWRNRNNPSFIMG 337
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9VLR9|MPPE1_DROME Metallophosphoesterase 1 homolog OS=Drosophila melanogaster GN=CG8455 PE=2 SV=4 | Back alignment and function description |
|---|
Score = 274 bits (701), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 185/296 (62%), Gaps = 11/296 (3%)
Query: 1 CNWPASPESI---NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHI 57
C WP + ++A+ +AD HLLGP RGHW DKL REW M + FQ A L QP+ +
Sbjct: 30 CKWPEIKRKKYVDDPLRAMILADPHLLGPHRGHWLDKLYREWHMTRAFQAASRLFQPDVV 89
Query: 58 FVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRF 117
FVLGDL DEG V + F YV R+ +F P G L V GNHD+GFHY++HP+ RF
Sbjct: 90 FVLGDLFDEGDMVSDKQFQEYVWRYLKMFHLPPGIPLISVAGNHDVGFHYKMHPFFMSRF 149
Query: 118 SRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK--DREC 175
N+S V L +IK +FV+INSMA+EGDGC C A+D++ IS L C + + EC
Sbjct: 150 ESYLNNSSVNLYTIKQIHFVVINSMAMEGDGCMFCTQAEDQLKNISRTLYCMKYPLEAEC 209
Query: 176 PKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLD 235
++ + YSQPI+LQHFP YR SD C D AP IE FR+R+ +SK++TDML +
Sbjct: 210 ARTRR-HPYSQPILLQHFPTYRISDTMCEEHD-APYIE---AFRERFHVLSKDATDMLGE 264
Query: 236 YLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGVN 291
L PRL GH+H+ CH + G + EYTV SFSWRNK NPSF++ + + V+
Sbjct: 265 LLKPRLAFAGHSHHFCHSVNRLG-IDEYTVASFSWRNKVNPSFMLATITPDDYVVS 319
|
Metallophosphoesterase. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|B1WC86|MPPE1_RAT Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 188/291 (64%), Gaps = 14/291 (4%)
Query: 1 CNWPASPESINN------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQP 54
C+WP +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QP
Sbjct: 49 CHWPEVKMPARGGRQEPVLKAMFLADTHLLGEIRGHWLDKLRREWQMERAFQTALWLLQP 108
Query: 55 EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLN 114
E +F+LGD+ DEG++ + + + + RF +F +L VV GNHD+GFHY++ Y
Sbjct: 109 EVVFILGDVFDEGKWSSAQAWADDLHRFQRMFRHGSHVQLKVVIGNHDIGFHYQMSKYRI 168
Query: 115 DRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD-- 172
+RF + F S +L S+KG FV++NS+A+EGDGC +C A+ + IS KL C ++
Sbjct: 169 NRFEKVFGSE--RLFSLKGVNFVMVNSVAMEGDGCTICSEAEAELREISRKLNCSQEQVQ 226
Query: 173 --RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKEST 230
+C +L S P++LQH+PLYR SD CSG D+AP E+ F ++++ +S+E++
Sbjct: 227 GSSQCDHEPRL-PLSAPVLLQHYPLYRASDANCSGEDAAPPEERSVPFEEKYDVLSREAS 285
Query: 231 DMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRL++ GHTH+ C H G E +VPSFSWRN+NNPSF+MG
Sbjct: 286 QKLLWWLRPRLILSGHTHSACEVLHP-GGAPEVSVPSFSWRNRNNPSFIMG 335
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 293 | ||||||
| 340720962 | 383 | PREDICTED: metallophosphoesterase 1-like | 0.986 | 0.754 | 0.554 | 1e-95 | |
| 350404623 | 383 | PREDICTED: metallophosphoesterase 1-like | 0.989 | 0.757 | 0.552 | 1e-95 | |
| 383847190 | 383 | PREDICTED: metallophosphoesterase 1-like | 0.989 | 0.757 | 0.542 | 6e-95 | |
| 156543679 | 383 | PREDICTED: metallophosphoesterase 1-like | 0.979 | 0.749 | 0.557 | 4e-94 | |
| 380026977 | 390 | PREDICTED: metallophosphoesterase 1-like | 0.989 | 0.743 | 0.546 | 1e-93 | |
| 307181461 | 647 | Metallophosphoesterase 1 [Camponotus flo | 0.955 | 0.432 | 0.546 | 1e-93 | |
| 110760948 | 383 | PREDICTED: metallophosphoesterase 1-like | 0.989 | 0.757 | 0.549 | 2e-93 | |
| 307196034 | 371 | Metallophosphoesterase 1 [Harpegnathos s | 0.989 | 0.781 | 0.523 | 3e-92 | |
| 189235643 | 372 | PREDICTED: similar to AGAP009304-PA [Tri | 0.979 | 0.771 | 0.538 | 3e-91 | |
| 332025297 | 378 | Metallophosphoesterase 1 [Acromyrmex ech | 0.914 | 0.708 | 0.566 | 2e-89 |
| >gi|340720962|ref|XP_003398897.1| PREDICTED: metallophosphoesterase 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 216/305 (70%), Gaps = 16/305 (5%)
Query: 1 CNWP-------------ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQT 47
C WP ++PE + A+FIADTHLLG GHWFDKL+REWQMY+ FQT
Sbjct: 39 CAWPVLEPHKTDTTITESTPEE-TPVHAMFIADTHLLGSKNGHWFDKLKREWQMYRAFQT 97
Query: 48 AVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHY 107
V LH+P+ IF+LGDL DEGQ+ +FD Y++RF+SLFS P T L+VV GNHD+GFHY
Sbjct: 98 MVTLHKPDIIFILGDLFDEGQWSSSAEFDQYIQRFHSLFSVPKHTHLYVVAGNHDIGFHY 157
Query: 108 RLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLK 167
+ PYLN RF S VK +SI+G++FVLINSMALEGDGCFLC+P + ++ IS LK
Sbjct: 158 AITPYLNQRFVNGLKSPSVKRVSIRGNHFVLINSMALEGDGCFLCRPTEIALNKISTHLK 217
Query: 168 CCRK-DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECIS 226
C + C K + YS+PIILQH+P+YRESDE C+ PD APD K KFR+RWEC+S
Sbjct: 218 CAKDMGSSCNKDNAISRYSRPIILQHYPMYRESDEICNEPDQAPDEIKDIKFRERWECLS 277
Query: 227 KESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVEN 286
KE+++ LLD LNPRL+I+GHTH+GC + H + E+T+PSFSWRNK+NPS L+G N
Sbjct: 278 KEASEQLLDILNPRLIINGHTHHGCRRIHR-KDILEFTIPSFSWRNKDNPSLLLGVFTPN 336
Query: 287 SSGVN 291
+ V+
Sbjct: 337 NYSVS 341
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350404623|ref|XP_003487166.1| PREDICTED: metallophosphoesterase 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 213/304 (70%), Gaps = 14/304 (4%)
Query: 1 CNWPA------------SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA 48
C WP S + A+FIADTHLLG GHWFDKL+REWQMY+ FQT
Sbjct: 39 CAWPVLEPHKTDTTITESTSEETPVHAMFIADTHLLGSKNGHWFDKLKREWQMYRAFQTM 98
Query: 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYR 108
V LH+P+ IF+LGDL DEGQ+ +FD Y++RF+SLFS P T L+VV GNHD+GFHY
Sbjct: 99 VTLHKPDIIFILGDLFDEGQWSSSAEFDQYIQRFHSLFSVPKHTHLYVVAGNHDIGFHYA 158
Query: 109 LHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168
+ PYLN RF S VK +SI+G++FVLINSMALEGDGCFLC+P + ++ IS LKC
Sbjct: 159 ITPYLNQRFVNGLKSPSVKRVSIRGNHFVLINSMALEGDGCFLCRPTEIALNKISTHLKC 218
Query: 169 CRK-DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
+ C K + YS+PIILQH+P+YRESDE C+ PD APD K KFR+RWEC+SK
Sbjct: 219 AKDMGSSCNKDNAISRYSRPIILQHYPMYRESDEICNEPDQAPDEIKDIKFRERWECLSK 278
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
E+++ LLD LNPRL+I+GHTH+GC + H + E+T+PSFSWRNK+NPS L+G N+
Sbjct: 279 EASEQLLDILNPRLIINGHTHHGCRRIHR-KDILEFTIPSFSWRNKDNPSLLLGVFTPNN 337
Query: 288 SGVN 291
V+
Sbjct: 338 YSVS 341
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383847190|ref|XP_003699238.1| PREDICTED: metallophosphoesterase 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 165/304 (54%), Positives = 219/304 (72%), Gaps = 14/304 (4%)
Query: 1 CNWPA-SPESINN-----------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA 48
C+WP+ P I+ + A+FIADTHLLG GHWFDKL+REWQMY+ FQT
Sbjct: 39 CSWPSLDPRKIDVTIPRTKPEETPVHAMFIADTHLLGSRNGHWFDKLKREWQMYRAFQTM 98
Query: 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYR 108
+ LH+P+ IF+LGD+ DEGQ+ +F+ ++RF+S+FS P T L+VV GNHD+GFHY
Sbjct: 99 ITLHEPDIIFILGDIFDEGQWSSSTEFNQSIQRFHSIFSVPKNTYLYVVAGNHDIGFHYA 158
Query: 109 LHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168
+ PYLN RF SS VK +SI+G++FVLINSMALEGDGCFLC+P + ++ I+A LKC
Sbjct: 159 ITPYLNQRFVDGLKSSSVKRVSIRGNHFVLINSMALEGDGCFLCRPTEIALNKIAAHLKC 218
Query: 169 CR-KDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
+ C KS + YS+PIILQH+P+YRESDE C+ PD AP+ K KFR+RWEC+SK
Sbjct: 219 AKGMASNCEKSNVISRYSRPIILQHYPMYRESDEICNEPDEAPEEIKNIKFRERWECLSK 278
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
E+++ LLD LNPRL++DGHTH+GC + H + E+T+PSFSWRNK+NPS L+G N+
Sbjct: 279 EASEQLLDILNPRLIVDGHTHHGCRRIHR-QDILEFTIPSFSWRNKDNPSLLLGVFTPNN 337
Query: 288 SGVN 291
V+
Sbjct: 338 YSVS 341
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156543679|ref|XP_001605368.1| PREDICTED: metallophosphoesterase 1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/289 (55%), Positives = 214/289 (74%), Gaps = 2/289 (0%)
Query: 4 PASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDL 63
PA+ + A+F+ADTHLLG GHWFDKLRREWQMY+TFQT +A+H+P+ +F+LGD+
Sbjct: 54 PAATSEEKPVHAMFLADTHLLGSKNGHWFDKLRREWQMYRTFQTVMAIHRPDVVFILGDV 113
Query: 64 LDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS 123
DEGQ+ ++F+ Y+ RF S+FS P T L+VV GNHD+GFHY + PYLN RF+ N+
Sbjct: 114 FDEGQWCSSDEFEGYISRFQSMFSVPKNTHLYVVSGNHDIGFHYVITPYLNQRFTTGMNA 173
Query: 124 SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK-DRECPKSMKLG 182
V+ +SI+G++FVL+NSMALEGDGCFLC+P + ++ IS LKC + +C K+ +
Sbjct: 174 PSVRRISIRGNHFVLVNSMALEGDGCFLCRPTEVAVNKISKHLKCAKGIGSDCNKNNAIK 233
Query: 183 SYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLV 242
YS+PI+LQHFPLYRESDE C D AP K KFR+RWEC+S+E+T+ LLD L+PRLV
Sbjct: 234 RYSRPILLQHFPLYRESDEICDELDEAPAEIKDIKFRERWECLSREATEQLLDILHPRLV 293
Query: 243 IDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGVN 291
+DGHTH+GC K H + E TVPSFSWRNK+NPSFL+G N+ ++
Sbjct: 294 VDGHTHHGCRKIHR-EDILEVTVPSFSWRNKDNPSFLLGIFTPNNYAIS 341
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380026977|ref|XP_003697214.1| PREDICTED: metallophosphoesterase 1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/304 (54%), Positives = 212/304 (69%), Gaps = 14/304 (4%)
Query: 1 CNWPA-SPESINN-----------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA 48
C WP P I+ + A+FIADTHLLG GHWFDKLRREWQMY+ FQT
Sbjct: 39 CTWPILEPHKIDMTITQIKPEETPVHAMFIADTHLLGSKHGHWFDKLRREWQMYRAFQTM 98
Query: 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYR 108
+ LH+P+ IF+LGDL DEGQ+ +FD YV+RF+SLFS P L+VV GNHD+GFHY
Sbjct: 99 ITLHKPDIIFILGDLFDEGQWSSSTEFDQYVQRFHSLFSVPKHIHLYVVAGNHDIGFHYG 158
Query: 109 LHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168
+ PYLN RF S VK +SI+G++FVLINSMALEGDGCFLC+P + ++ I+ LKC
Sbjct: 159 ITPYLNQRFVNGLKSPSVKRVSIRGNHFVLINSMALEGDGCFLCRPTEIALNKIATHLKC 218
Query: 169 CRKD-RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
+ C K + YS+PIILQHFP+YRESDE C+ D APD K KFR+RWEC+SK
Sbjct: 219 AKNTGNNCNKDNVISRYSRPIILQHFPMYRESDEICNELDQAPDEIKDIKFRERWECLSK 278
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
E+++ LLD LNPRL+I+GHTH+GC + H + E+T+ SFSWRNK+NPS L+G N+
Sbjct: 279 EASEQLLDILNPRLIINGHTHHGCRRIHR-KDILEFTISSFSWRNKDNPSLLLGVFTPNN 337
Query: 288 SGVN 291
++
Sbjct: 338 YSIS 341
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307181461|gb|EFN69053.1| Metallophosphoesterase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/293 (54%), Positives = 207/293 (70%), Gaps = 13/293 (4%)
Query: 1 CNWPA-----------SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAV 49
C WP + + +KA+FIADTHLLGP GHWFDKLRREWQMY+ FQT +
Sbjct: 37 CQWPVLNPQKEDLALHTEATDRPVKAMFIADTHLLGPKEGHWFDKLRREWQMYRVFQTMM 96
Query: 50 ALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109
+++ PE +F+LGD+ DEGQ+ +F+NY++RF+SLF P T L+VV GNHDMGFHY +
Sbjct: 97 SIYGPEVVFILGDVFDEGQWCSSTEFENYIQRFHSLFHVPKDTRLYVVAGNHDMGFHYAI 156
Query: 110 HPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
PY N RF S V+ LSI+ ++FVLINSMALEGDGCFLC+P + ++ I+ LKC
Sbjct: 157 TPYRNQRFINGLKSPSVRRLSIRDNHFVLINSMALEGDGCFLCRPTEIAVNKIAKDLKCA 216
Query: 170 RK-DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKE 228
RK C + + YS+PI+LQH+P+YRESDE C+ D APD K KFR+RWEC+SKE
Sbjct: 217 RKMSNGCRNASAIARYSRPILLQHYPMYRESDEICNELDQAPDEIKAIKFRERWECLSKE 276
Query: 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
+++ LLD LNPRL++ GHTH+GC + H V E+T+PSFSWRNK NPS LM
Sbjct: 277 ASEQLLDILNPRLIVAGHTHHGCRRIHR-DDVLEFTIPSFSWRNKINPSLLMA 328
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|110760948|ref|XP_625094.2| PREDICTED: metallophosphoesterase 1-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 212/304 (69%), Gaps = 14/304 (4%)
Query: 1 CNWPA-SPESINN-----------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA 48
C WP P I+ + A+FIADTHLLG GHWFDKLRREWQMY+ FQT
Sbjct: 39 CTWPILEPHKIDMTITQLKPEETPVHAMFIADTHLLGSKHGHWFDKLRREWQMYRAFQTM 98
Query: 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYR 108
+ LH+P+ IF+LGDL DEGQ+ +FD YV+RF+SLFS P L+VV GNHD+GFHY
Sbjct: 99 ITLHKPDIIFILGDLFDEGQWSSSAEFDQYVQRFHSLFSVPKHIHLYVVAGNHDIGFHYG 158
Query: 109 LHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168
+ PYLN RF S VK +SI+G++FVLINSMALEGDGCFLC+P + ++ I+ LKC
Sbjct: 159 ITPYLNQRFVNGLKSPSVKRVSIRGNHFVLINSMALEGDGCFLCRPTEIALNKIATHLKC 218
Query: 169 CRKD-RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
+ C K + YS+PIILQHFP+YRESDE C+ D APD K KFR+RWEC+SK
Sbjct: 219 AKDTGNNCNKDNVISRYSRPIILQHFPMYRESDEICNELDQAPDEIKDIKFRERWECLSK 278
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
E+++ LLD LNPRL+I+GHTH+GC + H + E+T+ SFSWRNK+NPS L+G N+
Sbjct: 279 EASEQLLDILNPRLIINGHTHHGCRRIHR-KDILEFTISSFSWRNKDNPSLLLGVFTPNN 337
Query: 288 SGVN 291
V+
Sbjct: 338 YSVS 341
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307196034|gb|EFN77759.1| Metallophosphoesterase 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/304 (52%), Positives = 212/304 (69%), Gaps = 14/304 (4%)
Query: 1 CNWPA------------SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA 48
C+WPA + + +KAIFIADTHLLGP GHWFDKLRREWQMY+ FQT
Sbjct: 27 CDWPALDSRKEDLTVSQTEATEKPVKAIFIADTHLLGPRNGHWFDKLRREWQMYRAFQTM 86
Query: 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYR 108
+ +H+P+ +F+LGD+ DEGQ+ +F++Y++RF+SLF P T L+VV GNHD+GFHY
Sbjct: 87 MTIHRPDVVFILGDVFDEGQWCSSTEFESYIQRFHSLFYVPKNTYLYVVAGNHDIGFHYA 146
Query: 109 LHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168
+ PY N RF S V+ +SI+ ++F LINSMALEGDGCFLC+P + + I+ LKC
Sbjct: 147 ITPYRNQRFINGLKSPNVRRVSIRDNHFTLINSMALEGDGCFLCRPTEIAVDKIAKDLKC 206
Query: 169 CRK-DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISK 227
RK +C + + YS+PI+LQH+P+YRESDE C+ D APD K KFR+RWEC+SK
Sbjct: 207 ARKMGNDCNNASAISRYSRPILLQHYPMYRESDEICNELDQAPDDIKNIKFRERWECLSK 266
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
E+++ LLD LNPRL++ GHTH+GC + H + E+T+PSFSWRNK NPS LMG +
Sbjct: 267 EASEQLLDILNPRLIVAGHTHHGCRRIHR-DDILEFTIPSFSWRNKVNPSLLMGVFTPRN 325
Query: 288 SGVN 291
V+
Sbjct: 326 YAVS 329
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|189235643|ref|XP_967729.2| PREDICTED: similar to AGAP009304-PA [Tribolium castaneum] gi|270004406|gb|EFA00854.1| hypothetical protein TcasGA2_TC003757 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 212/297 (71%), Gaps = 10/297 (3%)
Query: 1 CNWPA------SPESINN----IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA 50
C WP P N +K + +ADTHLLG GHWFDKLRREWQM++ FQTA++
Sbjct: 36 CKWPELNPANEDPTIAKNNYEPVKVMVLADTHLLGSRNGHWFDKLRREWQMHRAFQTAMS 95
Query: 51 LHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLH 110
L +P+ +FVLGDL DEG Y +F+ YV+RFY+LF+ P+ T+L+V GNHD+GFHYR+
Sbjct: 96 LFKPDLVFVLGDLTDEGLYCSDAEFEYYVKRFYNLFAVPETTKLYVAVGNHDIGFHYRVS 155
Query: 111 PYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCR 170
PYLN RF AFN+ V+L+S+KG++FVL+NSMALEGDGCFLC+PA+ ++S I KLKC +
Sbjct: 156 PYLNQRFVAAFNAPAVQLISVKGNHFVLVNSMALEGDGCFLCQPAEHQLSRIEKKLKCTK 215
Query: 171 KDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKEST 230
D KL YS+PI++QH+PLYR+SD EC D+APD KR++FR+ WEC+SKE+T
Sbjct: 216 GDYSGKCDSKLDIYSKPILMQHYPLYRKSDMECDDFDAAPDPIKRERFRETWECLSKEAT 275
Query: 231 DMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
LL+ + PRL + GHTH+GC + G E T+PSFSWRNK NP+F +G N+
Sbjct: 276 TQLLNQIKPRLALSGHTHHGCTRPLPNGDGIEITLPSFSWRNKENPNFGLGVFTPNN 332
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332025297|gb|EGI65468.1| Metallophosphoesterase 1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 202/270 (74%), Gaps = 2/270 (0%)
Query: 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGG 72
+KA+FIADTHLLG +GHWFDKLRREWQMY+ FQT + LHQ + +FVLGD+ DEG++ G
Sbjct: 56 VKAMFIADTHLLGSKQGHWFDKLRREWQMYRAFQTIMTLHQMDVVFVLGDVFDEGKWCGS 115
Query: 73 EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIK 132
+F+ Y++RF+SLF P T ++VV GNHDMGFHY + PY N RF S V+ LS++
Sbjct: 116 AEFEYYIKRFHSLFYVPKDTRIYVVAGNHDMGFHYAITPYRNQRFINGMKSPNVRRLSLR 175
Query: 133 GSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK-DRECPKSMKLGSYSQPIILQ 191
++FVLINSMALEGDGCFLC+P + ++ I+ LKC R+ +C + + YS+PI+LQ
Sbjct: 176 DNHFVLINSMALEGDGCFLCRPTEIAVNKIAKDLKCARRIGNDCYNASAISRYSRPILLQ 235
Query: 192 HFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGC 251
H+P+YRESDE C+ D APD K KFR+RWEC+SKE+++ LLD LNPRL++ GHTH+GC
Sbjct: 236 HYPMYRESDEICNELDQAPDELKAIKFRERWECLSKEASEQLLDILNPRLIVAGHTHHGC 295
Query: 252 HKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
+ H + E+T+ SFSWRNK NPS LMG
Sbjct: 296 RRIHR-DDILEFTISSFSWRNKVNPSLLMG 324
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 293 | ||||||
| UNIPROTKB|D2I2M6 | 392 | MPPE1 "Metallophosphoesterase | 0.945 | 0.706 | 0.489 | 2.2e-73 | |
| UNIPROTKB|Q5ZK82 | 398 | MPPE1 "Metallophosphoesterase | 0.935 | 0.688 | 0.480 | 5.9e-73 | |
| UNIPROTKB|E2QZ96 | 392 | MPPE1 "Uncharacterized protein | 0.945 | 0.706 | 0.5 | 7.5e-73 | |
| UNIPROTKB|F6XU00 | 371 | MPPE1 "Uncharacterized protein | 0.945 | 0.746 | 0.498 | 1.2e-72 | |
| UNIPROTKB|Q0IHA5 | 405 | mppe1 "Metallophosphoesterase | 0.959 | 0.693 | 0.473 | 2.3e-71 | |
| UNIPROTKB|E1BNZ9 | 399 | MPPE1 "Uncharacterized protein | 0.935 | 0.686 | 0.498 | 3.7e-71 | |
| UNIPROTKB|Q9GMS6 | 396 | MPPE1 "Metallophosphoesterase | 0.945 | 0.699 | 0.471 | 3.7e-71 | |
| UNIPROTKB|Q53F39 | 396 | MPPE1 "Metallophosphoesterase | 0.952 | 0.704 | 0.467 | 6.1e-71 | |
| FB|FBgn0031997 | 370 | CG8455 [Drosophila melanogaste | 0.945 | 0.748 | 0.486 | 1.3e-70 | |
| UNIPROTKB|C7G3A0 | 391 | MPPE1 "Metallophosphoesterase | 0.945 | 0.708 | 0.475 | 3.3e-70 |
| UNIPROTKB|D2I2M6 MPPE1 "Metallophosphoesterase 1" [Ailuropoda melanoleuca (taxid:9646)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 142/290 (48%), Positives = 192/290 (66%)
Query: 1 CNWP-----ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP AS +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QPE
Sbjct: 49 CDWPEVKTPASDSGQKTLKAMFLADTHLLGEVRGHWLDKLRREWQMERAFQTALRLLQPE 108
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + V RF +F P +L VV GNHD+GFHY+++ Y
Sbjct: 109 VVFILGDIFDEGKWSSSQAWADDVERFQKIFRHPRHVQLKVVAGNHDIGFHYQMNAYKIK 168
Query: 116 RFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE- 174
RF + F+ +L S KG FV++NS+ALEGDGC +C A+ + IS KL C RK
Sbjct: 169 RFEKVFSPE--RLFSWKGINFVMVNSVALEGDGCHICSEAEAELIEISRKLNCSRKQERR 226
Query: 175 ---CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231
CP L + S P++LQHFPLYR SD CSG D+AP E+ F++R++ +S+E++
Sbjct: 227 SGPCPDPQLLPA-SAPVLLQHFPLYRRSDANCSGEDAAPLEERGIPFKERYDVLSQEASQ 285
Query: 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRL++ GHTH+ C H +V E +VPSFSWRN+NNPSF+MG
Sbjct: 286 QLLWWLRPRLILSGHTHSACEVLHG-AEVPEISVPSFSWRNRNNPSFIMG 334
|
|
| UNIPROTKB|Q5ZK82 MPPE1 "Metallophosphoesterase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 136/283 (48%), Positives = 200/283 (70%)
Query: 6 SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLD 65
+P S+ +KA+F+ADTHLLG +GHW DKLRREWQM ++FQTA+ L QP+ +F+LGD+ D
Sbjct: 63 TPASV--LKAMFLADTHLLGEIKGHWLDKLRREWQMERSFQTALWLLQPDIVFILGDVFD 120
Query: 66 EGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSM 125
EG++ + + + VRRF +F P TEL V+ GNHD+GFHY + Y RF + FN +
Sbjct: 121 EGKWDSPQAWADDVRRFQKMFKYPVTTELVVIVGNHDIGFHYEMTTYKVHRFEKVFNFTS 180
Query: 126 VKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD-----RECPKSMK 180
KL++ KG+ FVL+NS+A+EGDGC LC+ A+ ++ +S +L C ++ + C + K
Sbjct: 181 GKLITRKGTNFVLVNSVAMEGDGCTLCRTAEAKLVALSHRLNCSLQEPNHPQKRCSDAEK 240
Query: 181 LGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR 240
+ SQPI+LQH+PLYR+SD ECSG D+AP EK F+++++ +S+E++ LL + PR
Sbjct: 241 PPA-SQPILLQHYPLYRKSDAECSGEDAAPPEEKNIPFKEKYDVLSQEASQKLLWWFRPR 299
Query: 241 LVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
L++ GHTH+ C H G + E ++PSFSWRN+NNPSF+MG +
Sbjct: 300 LILSGHTHSACQVLHT-GGIPEISIPSFSWRNRNNPSFIMGSI 341
|
|
| UNIPROTKB|E2QZ96 MPPE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 145/290 (50%), Positives = 192/290 (66%)
Query: 1 CNWP-----ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP A +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QPE
Sbjct: 48 CDWPEVKTAAHGSGQKTLKAMFLADTHLLGEVRGHWLDKLRREWQMERAFQTALWLLQPE 107
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + VRRF +F P +L VV GNHD+GFHY++ Y
Sbjct: 108 VVFILGDIFDEGKWSSSQGWADDVRRFQKIFRHPQHVQLKVVAGNHDIGFHYQMSTYKIK 167
Query: 116 RFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDREC 175
RF + FN +L S KG FVL+NS+ALEGDGC LC A+ + IS KL C R ++E
Sbjct: 168 RFEKVFNPE--RLFSWKGINFVLVNSVALEGDGCHLCSEAERELIEISHKLNCSR-EQEP 224
Query: 176 PKSMKLGSY----SQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231
S+ G S P++LQHFPLYR SD CSG D+AP E+ F++R++ +S+E++
Sbjct: 225 GSSLCRGLQPLPGSAPVLLQHFPLYRSSDANCSGEDAAPLEERGIPFKERYDVLSQEASQ 284
Query: 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRL++ GHTH+ C H G V E +VPSFSWRN+NNPSF+MG
Sbjct: 285 KLLWWLRPRLILSGHTHSACEVLHGAG-VPEISVPSFSWRNRNNPSFIMG 333
|
|
| UNIPROTKB|F6XU00 MPPE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 144/289 (49%), Positives = 190/289 (65%)
Query: 1 CNWP-----ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP A +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ L QPE
Sbjct: 48 CDWPEVKTAAHGSGQKTLKAMFLADTHLLGEVRGHWLDKLRREWQMERAFQTALWLLQPE 107
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + VRRF +F P +L VV GNHD+GFHY++ Y
Sbjct: 108 VVFILGDIFDEGKWSSSQGWADDVRRFQKIFRHPQHVQLKVVAGNHDIGFHYQMSTYKIK 167
Query: 116 RFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE- 174
RF + FN +L S KG FVL+NS+ALEGDGC LC A+ + IS KL C R++
Sbjct: 168 RFEKVFNPE--RLFSWKGINFVLVNSVALEGDGCHLCSEAERELIEISHKLNCSREEPGS 225
Query: 175 --CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDM 232
C L S P++LQHFPLYR SD CSG D+AP E+ F++R++ +S+E++
Sbjct: 226 SLCRGLQPLPG-SAPVLLQHFPLYRSSDANCSGEDAAPLEERGIPFKERYDVLSQEASQK 284
Query: 233 LLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRL++ GHTH+ C H G V E +VPSFSWRN+NNPSF+MG
Sbjct: 285 LLWWLRPRLILSGHTHSACEVLHGAG-VPEISVPSFSWRNRNNPSFIMG 332
|
|
| UNIPROTKB|Q0IHA5 mppe1 "Metallophosphoesterase 1" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 142/300 (47%), Positives = 201/300 (67%)
Query: 1 CNWPA-----SPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE 55
C+WP +S +K +F+ADTHLLG RGHW DKLRREWQM +++Q+A+ L QP+
Sbjct: 54 CSWPEVKGAHKEDSTPVLKVMFLADTHLLGEIRGHWLDKLRREWQMERSYQSALWLLQPD 113
Query: 56 HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLND 115
+F+LGD+ DEG++ + + + V RF +F P T+L V+ GNHD+GFHY + Y
Sbjct: 114 IVFILGDVFDEGKWSIPQAWSSDVARFQKMFRHPPHTQLIVLVGNHDIGFHYDMTVYKLS 173
Query: 116 RFSRAFNSSMVKLLSIKG------SYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
RF + FN + KL+S KG S FVL+NSMALEGD C +C+ A+D++ IS KL C
Sbjct: 174 RFEKTFNFTSGKLVSPKGINHILSSSFVLLNSMALEGDDCHICRAAEDQLRRISIKLNCS 233
Query: 170 RKDRECP------KSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWE 223
R RE P K+++ S PI+LQH+PLYR SD EC+G DSA EK+ F+++++
Sbjct: 234 RM-REHPDFQKKCKNVEKTPVSAPILLQHYPLYRISDSECTGEDSASPEEKKVLFKEKYD 292
Query: 224 CISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
+S+++++ LL L PRL++ GHTH+ C H GK+ E +VPSFSWRN+NNPSF+MG +
Sbjct: 293 VLSQDASEKLLQLLQPRLILSGHTHSACEVLHQ-GKIPEISVPSFSWRNRNNPSFIMGSI 351
|
|
| UNIPROTKB|E1BNZ9 MPPE1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 141/283 (49%), Positives = 190/283 (67%)
Query: 4 PASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDL 63
P +PE + ++A+F+ADTHLLG RGHW DKLRREWQM + FQTAV L QPE +F+LGD+
Sbjct: 66 PKAPEPV--LRAMFLADTHLLGAVRGHWLDKLRREWQMERAFQTAVWLLQPEVVFILGDI 123
Query: 64 LDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS 123
DEG++ E + + V RF+ +F P +L V GNHD+GFHY++ Y RF + FN
Sbjct: 124 FDEGKWSSPEAWADDVGRFWKVFRHPPHVQLRAVAGNHDIGFHYQMDTYRIKRFEKVFNP 183
Query: 124 SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD---RECPKSMK 180
+L S KG FV++NS+ALEGDGC +C A+ + IS L C R++ R C +
Sbjct: 184 E--RLFSWKGINFVMVNSVALEGDGCDICSRAEAELLEISHWLNCSREEHSPRGCGDRQR 241
Query: 181 LGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR 240
L + S PI+LQHFPLYR +D CSG D+AP EK F++R++ +S E + LL +L PR
Sbjct: 242 LPA-SAPILLQHFPLYRRNDANCSGEDAAPPDEKYTPFKERYDVLSWEVSRKLLWWLRPR 300
Query: 241 LVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
L++ GHTH+ C H G V E +VPSFSWRN+NNPSF+MG +
Sbjct: 301 LILSGHTHSACEVQHRAG-VLEVSVPSFSWRNRNNPSFIMGSI 342
|
|
| UNIPROTKB|Q9GMS6 MPPE1 "Metallophosphoesterase 1" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 140/297 (47%), Positives = 195/297 (65%)
Query: 1 CNWP-----------ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAV 49
CNWP AS E + +KA+F+ADTHLLG F GHW DKLRREWQM + QTA+
Sbjct: 49 CNWPEVKTTAYDGEQASHEPV--LKAMFLADTHLLGEFLGHWLDKLRREWQMERALQTAL 106
Query: 50 ALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109
L QPE +F+LGD+ DEG++ E + + V RF +F P +L VV GNHD+GFHY +
Sbjct: 107 WLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEM 166
Query: 110 HPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169
+ Y +RF + F+S +L S KG FV++NS+A+ GDGC +C A+ + +S +L C
Sbjct: 167 NTYKVERFEKVFSSE--RLFSWKGINFVMVNSVAMNGDGCGICSEAEAELIEVSHRLNCS 224
Query: 170 RK---DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECIS 226
R+ R C L S P++LQH+PLYR SD CSG D+AP E+ F++ ++ +S
Sbjct: 225 REARGSRRCGPGPLL-PVSAPVLLQHYPLYRRSDANCSGDDAAPPEERDIPFKENYDVLS 283
Query: 227 KESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
+E++ LL +L PRLV+ GHTH+ C +H G+V E++VPSFSWRN+NNPSF+MG +
Sbjct: 284 REASQKLLWWLQPRLVLSGHTHSACEVHHG-GRVPEFSVPSFSWRNRNNPSFIMGSI 339
|
|
| UNIPROTKB|Q53F39 MPPE1 "Metallophosphoesterase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 138/295 (46%), Positives = 194/295 (65%)
Query: 1 CNWPASPESINN---------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL 51
CNWP + ++ +KA+F+ADTHLLG F GHW DKLRREWQM + FQTA+ L
Sbjct: 49 CNWPEVKTTASDGEQTTREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWL 108
Query: 52 HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHP 111
QPE +F+LGD+ DEG++ E + + V RF +F P +L VV GNHD+GFHY ++
Sbjct: 109 LQPEVVFILGDIFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNT 168
Query: 112 YLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171
Y +RF + F+S +L S KG FV++NS+AL GDGC +C + + +S +L C R+
Sbjct: 169 YKVERFEKVFSSE--RLFSWKGINFVMVNSVALNGDGCGICSETEAELIEVSHRLNCSRE 226
Query: 172 DR---ECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKE 228
R C L + S P++LQH+PLYR SD CSG D+AP E+ F++ ++ +S+E
Sbjct: 227 ARGSSRCGPGPLLPT-SAPVLLQHYPLYRRSDANCSGEDAAPAEERDIPFKENYDVLSRE 285
Query: 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
++ LL +L PRLV+ GHTH+ C +H G+V E +VPSFSWRN+NNPSF+MG +
Sbjct: 286 ASQKLLWWLQPRLVLSGHTHSACEVHHG-GRVPELSVPSFSWRNRNNPSFIMGSI 339
|
|
| FB|FBgn0031997 CG8455 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 140/288 (48%), Positives = 184/288 (63%)
Query: 1 CNWPASPES--INN-IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHI 57
C WP +++ ++A+ +AD HLLGP RGHW DKL REW M + FQ A L QP+ +
Sbjct: 30 CKWPEIKRKKYVDDPLRAMILADPHLLGPHRGHWLDKLYREWHMTRAFQAASRLFQPDVV 89
Query: 58 FVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRF 117
FVLGDL DEG V + F YV R+ +F P G L V GNHD+GFHY++HP+ RF
Sbjct: 90 FVLGDLFDEGDMVSDKQFQEYVWRYLKMFHLPPGIPLISVAGNHDVGFHYKMHPFFMSRF 149
Query: 118 SRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK--DREC 175
N+S V L +IK +FV+INSMA+EGDGC C A+D++ IS L C + + EC
Sbjct: 150 ESYLNNSSVNLYTIKQIHFVVINSMAMEGDGCMFCTQAEDQLKNISRTLYCMKYPLEAEC 209
Query: 176 PKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLD 235
++ + YSQPI+LQHFP YR SD C D AP IE FR+R+ +SK++TDML +
Sbjct: 210 ARTRR-HPYSQPILLQHFPTYRISDTMCEEHD-APYIEA---FRERFHVLSKDATDMLGE 264
Query: 236 YLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283
L PRL GH+H+ CH + G + EYTV SFSWRNK NPSF++ +
Sbjct: 265 LLKPRLAFAGHSHHFCHSVNRLG-IDEYTVASFSWRNKVNPSFMLATI 311
|
|
| UNIPROTKB|C7G3A0 MPPE1 "Metallophosphoesterase 1" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
|---|
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 138/290 (47%), Positives = 190/290 (65%)
Query: 1 CNWPASPESINN------IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQP 54
C+WP + +KA+F+ADTHLLG RGHW DKLRREWQM + FQTA+ QP
Sbjct: 47 CHWPEVKTLAHGDRQKPVLKAMFLADTHLLGEIRGHWLDKLRREWQMERAFQTALWWLQP 106
Query: 55 EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLN 114
E IF+LGD+ DEG++ E + + V+RF +F +L VV GNHD+GFHY++ Y
Sbjct: 107 EVIFILGDIFDEGKWSTTEAWADDVQRFRKIFRHGSHVQLKVVIGNHDIGFHYQMSKYRI 166
Query: 115 DRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK--- 171
RF + F+S +L S KG FV++NS+A+EGDGC +C A+ + IS KL C R+
Sbjct: 167 KRFEKVFSSE--RLFSWKGVNFVMVNSVAMEGDGCSICSEAEAELREISRKLNCSREVQG 224
Query: 172 DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231
+C +L +S P++LQH+PLYR SD CSG D+AP E+ F ++++ +S+E++
Sbjct: 225 SSQCEGEQRL-PFSAPVLLQHYPLYRASDANCSGEDAAPPEERNVPFEEKYDVLSREASQ 283
Query: 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMG 281
LL +L PRLV+ GHTH+ C H G V E +VPSFSWRN+NNPSF+MG
Sbjct: 284 KLLWWLQPRLVLSGHTHSACEVLHP-GGVPEVSVPSFSWRNRNNPSFIMG 332
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q5RET5 | MPPE1_PONAB | 3, ., 1, ., -, ., - | 0.4560 | 0.9590 | 0.7078 | yes | N/A |
| B1WC86 | MPPE1_RAT | 3, ., 1, ., -, ., - | 0.4570 | 0.9453 | 0.7030 | yes | N/A |
| Q53F39 | MPPE1_HUMAN | 3, ., 1, ., -, ., - | 0.4644 | 0.9590 | 0.7095 | yes | N/A |
| C7G3A0 | MPPE1_CRIGR | 3, ., 1, ., -, ., - | 0.4758 | 0.9453 | 0.7084 | yes | N/A |
| D2I2M6 | MPPE1_AILME | 3, ., 1, ., -, ., - | 0.4896 | 0.9453 | 0.7066 | yes | N/A |
| Q9VLR9 | MPPE1_DROME | 3, ., 1, ., -, ., - | 0.4763 | 0.9726 | 0.7702 | yes | N/A |
| Q80XL7 | MPPE1_MOUSE | 3, ., 1, ., -, ., - | 0.4659 | 0.9385 | 0.6944 | yes | N/A |
| Q5ZK82 | MPPE1_CHICK | 3, ., 1, ., -, ., - | 0.4633 | 0.9556 | 0.7035 | yes | N/A |
| Q566Y9 | MPPE1_DANRE | 3, ., 1, ., -, ., - | 0.4409 | 0.9488 | 0.7296 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 293 | |||
| cd08165 | 156 | cd08165, MPP_MPPE1, human MPPE1 and related protei | 3e-50 | |
| cd07384 | 171 | cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae C | 2e-23 | |
| cd08163 | 257 | cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 a | 2e-20 | |
| cd08165 | 156 | cd08165, MPP_MPPE1, human MPPE1 and related protei | 1e-14 | |
| cd08166 | 195 | cd08166, MPP_Cdc1_like_1, uncharacterized subgroup | 3e-11 | |
| cd07384 | 171 | cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae C | 2e-06 | |
| cd07398 | 217 | cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH | 4e-06 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-04 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-04 | |
| cd08164 | 193 | cd08164, MPP_Ted1, Saccharomyces cerevisiae Ted1 a | 3e-04 | |
| cd07391 | 172 | cd07391, MPP_PF1019, Pyrococcus furiosus PF1019 an | 0.001 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 0.002 | |
| TIGR04123 | 208 | TIGR04123, P_estr_lig_assc, metallophosphoesterase | 0.002 | |
| COG1407 | 235 | COG1407, COG1407, Predicted ICC-like phosphoestera | 0.003 |
| >gnl|CDD|163672 cd08165, MPP_MPPE1, human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 3e-50
Identities = 58/106 (54%), Positives = 77/106 (72%)
Query: 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDF 75
+F+ADTHLLG GHW DKLRREWQM ++FQT++ L QP+ +FVLGDL DEG++ E++
Sbjct: 1 MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEW 60
Query: 76 DNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAF 121
++YV RF +F P LHVV GNHD+GFHY + Y +RF + F
Sbjct: 61 EDYVERFKKMFGHPPDLPLHVVVGNHDIGFHYEMTTYKLERFEKVF 106
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 156 |
| >gnl|CDD|163627 cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 2e-23
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 17 FIADTHLLGPFRGHW-------FDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQY 69
+AD +L + + M + F+TA+ +P+ + LGDL D G+
Sbjct: 2 LVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRI 61
Query: 70 VGGEDFDNYVRRFYSLFSTPDGTE----LHVVPGNHDMGFHYRL-HPYLNDRFSRAF 121
E+++ YV+RF +F P ++ VPGNHD+G+ + P + DRF R F
Sbjct: 62 ADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGYGEVISFPEVVDRFERYF 118
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together with Emp24p and Erv25p in cargo exit from the ER, and human MPPE1. The human MPPE1 gene is a candidate susceptibility gene for bipolar disorder. These proteins belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 171 |
| >gnl|CDD|163670 cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 2e-20
Identities = 60/276 (21%), Positives = 102/276 (36%), Gaps = 43/276 (15%)
Query: 3 WPASPESINNIKAIFIADTHLLGPFRGHWFDKLRREW-QMYKTFQTAVALHQPEHIFVLG 61
+P P +N D +L RR W M K + P+ LG
Sbjct: 14 YPGRPWILN-TLTEHFVDNYL------------RRNWRYMQKQLK-------PDSTIFLG 53
Query: 62 DLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTE-LHVVPGNHDMGFHYRLHPYLNDRFSRA 120
DL D G+ E + RF +F G + + +PGNHD+GF + + RF +
Sbjct: 54 DLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKY 113
Query: 121 FNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMK 180
F + +++ + FV++++++L + + +MK
Sbjct: 114 FGPTS-RVIDVGNHTFVILDTISLS----------NKDDPDVYQPPREFLHSFS---AMK 159
Query: 181 LGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR 240
+ S + I+L H PLYR + C + Q + ++++L + P
Sbjct: 160 VKSKPR-ILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPV 218
Query: 241 LVIDGHTHNGCHKYHAY------GKVHEYTVPSFSW 270
+ G H+ C H Y G E TV S S
Sbjct: 219 IAFSGDDHDYCEVVHEYQFNGKSGSTREITVKSISM 254
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|163672 cd08165, MPP_MPPE1, human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-14
Identities = 32/86 (37%), Positives = 37/86 (43%), Gaps = 36/86 (41%)
Query: 188 IILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHT 247
I+LQHFPLYR LL +L PRLV+ GHT
Sbjct: 107 ILLQHFPLYR-----------------------------------LLQWLKPRLVLSGHT 131
Query: 248 HNGCHKYHAYGKVHEYTVPSFSWRNK 273
H+ C H E TVPSFSWRN+
Sbjct: 132 HSFCEVTH-PDGTPEVTVPSFSWRNR 156
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 156 |
| >gnl|CDD|163673 cd08166, MPP_Cdc1_like_1, uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 3e-11
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 16 IFIADTHLLG----PFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVG 71
+ +AD +LG F W + + + KT+ A+ QP+ + LGDL+DEG
Sbjct: 1 LLVADPQILGYQNENFGLGWIARWDSDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIAN 60
Query: 72 GEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSI 131
+++ +YV+RF ++F P+GT++ +PG++D+G + + R F
Sbjct: 61 DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED--PIESKIRR-FE--------- 108
Query: 132 KGSYFVLINSMAL 144
YF++++ + L
Sbjct: 109 --KYFIMLSHVPL 119
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 195 |
| >gnl|CDD|163627 cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 37/87 (42%)
Query: 188 IILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHT 247
I+L H PLYR LLD + P L++ GH
Sbjct: 119 ILLTHIPLYR-----------------------------------LLDTIKPVLILSGHD 143
Query: 248 HNGCHKYHAY--GKVHEYTVPSFSWRN 272
H+ C H+ G V E TV SFSWR
Sbjct: 144 HDQCEVVHSSKAGSVREITVKSFSWRM 170
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together with Emp24p and Erv25p in cargo exit from the ER, and human MPPE1. The human MPPE1 gene is a candidate susceptibility gene for bipolar disorder. These proteins belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 171 |
| >gnl|CDD|163641 cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-06
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLD---EGQYVGG 72
+FI+D HL F L A+AL + + +++LGD+ D V
Sbjct: 1 LFISDLHLGDGGPAADFLLLF--------LLAALALGEADALYLLGDIFDLWFGDDEVVP 52
Query: 73 EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109
+ L GT ++ VPGNHD
Sbjct: 53 PAAHEVLAALLRLAD--RGTRVYYVPGNHDFLLGDFF 87
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 217 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 40.9 bits (95), Expect = 2e-04
Identities = 37/235 (15%), Positives = 62/235 (26%), Gaps = 52/235 (22%)
Query: 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGE 73
+ + I D H G L + +P+ + LGDL+D G
Sbjct: 1 RILVIGDLHG-----GLDDLDLLLLLLE------LLGEPKPDLVLFLGDLVDRGPP---- 45
Query: 74 DFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKG 133
V +++V GNHD + + + + +
Sbjct: 46 --SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTV 103
Query: 134 SYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHF 193
L + G ++ + L+ L D + I+L H
Sbjct: 104 EIIGLSSLYGKGGG-----LVWEEFLELLDLLLLAALVDGK-------------ILLVHG 145
Query: 194 PLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTH 248
PL D + + LL LV+ GHTH
Sbjct: 146 PLSPSLDSGDDIYLFGEEA-----------------LEDLLKDNGVDLVLRGHTH 183
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 3e-04
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 19/103 (18%)
Query: 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDF 75
I+D H + L + A +P+ + VLGDL+ +G
Sbjct: 1 AVISDIHG-------NLEALEAVLEAA-----LAAAEKPDFVLVLGDLVGDGPD------ 42
Query: 76 DNYVRRFYSLFSTPDGTELHVVPGNHDM-GFHYRLHPYLNDRF 117
V G ++VVPGNHD+ H + L++
Sbjct: 43 PEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELS 85
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163671 cd08164, MPP_Ted1, Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 18/86 (20%)
Query: 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFS----------------TPDG-TELH 95
+P+ + VLGDL Q++ E+F R+ F DG T L
Sbjct: 44 KPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102
Query: 96 VVPGNHDMGFHYRLHPYLNDRFSRAF 121
+ GNHD+G+ + +RF F
Sbjct: 103 NIAGNHDVGYGGEVTEARIERFESLF 128
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 193 |
| >gnl|CDD|163634 cd07391, MPP_PF1019, Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 13/96 (13%)
Query: 18 IADTHLLGPFRGHWFDK---LRREWQMYKTFQTAVAL---HQPEHIFVLGDLLDEGQYVG 71
+AD HL G + + L Q T + L + PE + +LGDL G
Sbjct: 3 VADLHL-G--KEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHS---FG 56
Query: 72 GEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHY 107
G + L ++ ++ GNHD G
Sbjct: 57 GLSRQEF-EEVAFLRLLAKDVDVILIRGNHDGGLPE 91
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 172 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 28/95 (29%)
Query: 18 IADTHLLGPFRGHWF--DKLRREWQMYKTFQTAVAL-----HQPEHIFVLGDLLDEGQ-- 68
I+D HL G D + +A +P+ + V GDL D+G
Sbjct: 5 ISDLHLRADGEGALLGVDTAAS-------LEAVLAHINALHPRPDLVLVTGDLTDDGSPE 57
Query: 69 -YVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHD 102
Y R L + ++++PGNHD
Sbjct: 58 SY----------ERLRELLA-ALPIPVYLLPGNHD 81
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
| >gnl|CDD|234479 TIGR04123, P_estr_lig_assc, metallophosphoesterase, DNA ligase-associated | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.002
Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 26/109 (23%)
Query: 3 WPASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQM---YKTFQT------AVALHQ 53
WPA + + +AD HL G + F R Y T T + +Q
Sbjct: 18 WPAE-------RLLVVADLHL-G--KAAHF---RARGIPLPPYDTRATLERLAALIQRYQ 64
Query: 54 PEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHD 102
P + VLGDL + + F + G + ++ GNHD
Sbjct: 65 PRRLIVLGDLFHDRYGAERLTLE----DFAAWRRLHAGLDWVLIEGNHD 109
|
Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes. Length = 208 |
| >gnl|CDD|224325 COG1407, COG1407, Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 13 IKAIFIADTHL-LGPF---RGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQ 68
+ + +AD HL RG + + + ++ K + + P+ + +LGDL E
Sbjct: 20 GRTLVVADLHLGYEESLARRGINLPRYQTD-RILKRLDRIIERYGPKRLIILGDLKHEFG 78
Query: 69 YVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKL 128
++ + VR F D E+ ++ GNHD + + FN +V
Sbjct: 79 KSLRQEKE-EVREF---LELLDEREVIIIRGNHD--------NGIEEILPG-FNVEVVDE 125
Query: 129 LSIKGSYFV 137
L I G F
Sbjct: 126 LEIGGLLFR 134
|
Length = 235 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 293 | |||
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 100.0 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.97 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.97 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.96 | |
| KOG3662|consensus | 410 | 99.95 | ||
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.94 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.94 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.93 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.93 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.93 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.92 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.91 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.9 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.9 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.89 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.87 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.87 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.86 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.86 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.85 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.85 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.83 | |
| KOG1432|consensus | 379 | 99.83 | ||
| KOG1378|consensus | 452 | 99.79 | ||
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.79 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.79 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 99.79 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.79 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.77 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.76 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.75 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.75 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.74 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.71 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.7 | |
| KOG2679|consensus | 336 | 99.7 | ||
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.69 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.65 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.65 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.62 | |
| KOG3770|consensus | 577 | 99.62 | ||
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.61 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.61 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.6 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.6 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.59 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.57 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.56 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.52 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 99.52 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.51 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.5 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.5 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.49 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 99.48 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.46 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.42 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.41 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 99.36 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.25 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 99.19 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.17 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.13 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 99.13 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 99.1 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 99.1 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.08 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 99.05 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 99.05 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.0 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.85 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.81 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.76 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 98.76 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 98.75 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.71 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 98.71 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.7 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.68 | |
| KOG2310|consensus | 646 | 98.66 | ||
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.65 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.63 | |
| PHA02239 | 235 | putative protein phosphatase | 98.53 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.43 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.41 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.37 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.35 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 98.28 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.25 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.24 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 98.22 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.19 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.19 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 98.13 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.12 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 98.1 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.03 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.03 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 98.03 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.99 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.98 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.95 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.94 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.85 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 97.85 | |
| KOG3947|consensus | 305 | 97.77 | ||
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 97.67 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 97.64 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 97.52 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 97.51 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 97.5 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 97.48 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 97.41 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 97.36 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 97.3 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 97.18 | |
| KOG2863|consensus | 456 | 97.17 | ||
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.1 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 97.07 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.57 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 96.53 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.51 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.42 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 96.27 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 96.24 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.15 | |
| KOG3325|consensus | 183 | 96.01 | ||
| KOG4419|consensus | 602 | 95.71 | ||
| KOG3818|consensus | 525 | 92.89 | ||
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 90.97 | |
| PHA03008 | 234 | hypothetical protein; Provisional | 89.8 | |
| KOG2476|consensus | 528 | 89.61 | ||
| KOG2732|consensus | 435 | 86.36 | ||
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 85.83 | |
| KOG0374|consensus | 331 | 82.49 | ||
| COG3855 | 648 | Fbp Uncharacterized protein conserved in bacteria | 80.25 |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=261.47 Aligned_cols=242 Identities=21% Similarity=0.400 Sum_probs=189.6
Q ss_pred EEEecCCcCCCCC---Cch----hHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 16 IFIADTHLLGPFR---GHW----FDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 16 ~~iSD~H~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
++|+|+|+-..+. ..| +.++-.+.++++.+..++...+||+||++|||++.|....+++|.+.+++|.+++..
T Consensus 1 ~~vaDpql~~~~sy~~~~~~~~~~~~~~~D~ylr~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~ 80 (257)
T cd08163 1 ALVADPQLVDDHTYPGRPWILNTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDP 80 (257)
T ss_pred CcccCCccccCCccCCCchhhhhhhHHhhHHHHHHHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcC
Confidence 3689999976532 112 233334678888888888889999999999999999887888899889999999842
Q ss_pred C-CCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhh
Q psy2930 89 P-DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLK 167 (293)
Q Consensus 89 ~-~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~ 167 (293)
. ..+|++.||||||+++..........+|+++|+.. ++.+..++++||+|||..+.+... +.....+.+|+++.++
T Consensus 81 ~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~~-~~~~~~~~~~fV~Lds~~l~~~~~--~~~~~~~~~~l~~~l~ 157 (257)
T cd08163 81 SPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGPT-SRVIDVGNHTFVILDTISLSNKDD--PDVYQPPREFLHSFSA 157 (257)
T ss_pred CCccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCCC-ceEEEECCEEEEEEccccccCCcc--cccchhHHHHHHhhhh
Confidence 2 24799999999999876555555678999999987 689999999999999987765322 2345578888888776
Q ss_pred hcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccc-cccCHHHHHHHHhhcCccEEEecC
Q psy2930 168 CCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRW-ECISKESTDMLLDYLNPRLVIDGH 246 (293)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ll~~~~~~lvl~GH 246 (293)
... +..++||++|+|+++.....|++.++...+... ....+| ++|+++.+..||+..+|.+||+||
T Consensus 158 ~~~------------~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~-~~g~~yq~~l~~~~s~~il~~~~P~~vfsGh 224 (257)
T cd08163 158 MKV------------KSKPRILLTHVPLYRPPNTSCGPLRESKTPLPY-GYGYQYQNLLEPSLSEVILKAVQPVIAFSGD 224 (257)
T ss_pred ccC------------CCCcEEEEeccccccCCCCCCCCccccCCCCCC-CCCccceeecCHHHHHHHHHhhCCcEEEecC
Confidence 432 567899999999999888889876544322211 111223 699999999999999999999999
Q ss_pred CCCCceeeccC------CCeeEEeccceeccCC
Q psy2930 247 THNGCHKYHAY------GKVHEYTVPSFSWRNK 273 (293)
Q Consensus 247 ~H~~~~~~~~~------~~~~~~~~~s~~~~~~ 273 (293)
+|.+|..+|.+ ++++||+|+|+||..|
T Consensus 225 dH~~C~~~h~~~~~~~~~~~~E~tv~S~s~~~g 257 (257)
T cd08163 225 DHDYCEVVHEYQFNGKSGSTREITVKSISMAMG 257 (257)
T ss_pred CCccceeEcccccCCCCCCceEEEecccccccC
Confidence 99999988874 5899999999999864
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=230.95 Aligned_cols=249 Identities=18% Similarity=0.174 Sum_probs=170.1
Q ss_pred CceEEEEEecCCcCCCCCC--chhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh
Q psy2930 11 NNIKAIFIADTHLLGPFRG--HWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 86 (293)
.+++|+++||+|++..... ...+.......+.+.+.+.+++. +||+|+++|||++.+..... ....++.+.+.+
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~--~~~~~~~~~~~~ 80 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDEL--RERQVSDLKDVL 80 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhh--HHHHHHHHHHHH
Confidence 5799999999999864321 11122222223445666677766 99999999999998764321 112233344433
Q ss_pred cC-CCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHH
Q psy2930 87 ST-PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAK 165 (293)
Q Consensus 87 ~~-~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~ 165 (293)
.. ..++|+++++||||++... .....+.|.+.|+.. ++.+..++++||+|||..+..... .+....+|++||+++
T Consensus 81 ~~~~~~vp~~~i~GNHD~~~~~--~~~~~~~f~~~~g~~-~y~~~~~~~~~i~lds~~~~~~~~-~~~~~~~ql~WL~~~ 156 (262)
T cd07395 81 SLLDPDIPLVCVCGNHDVGNTP--TEESIKDYRDVFGDD-YFSFWVGGVFFIVLNSQLFFDPSE-VPELAQAQDVWLEEQ 156 (262)
T ss_pred hhccCCCcEEEeCCCCCCCCCC--ChhHHHHHHHHhCCc-ceEEEECCEEEEEeccccccCccc-cccchHHHHHHHHHH
Confidence 21 3478999999999986421 223356777788876 678889999999999987643322 234668899999999
Q ss_pred hhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEec
Q psy2930 166 LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDG 245 (293)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~G 245 (293)
|+.+.+. ...++||++|+|++...... .+... . .....+..+.+++++++++++|||
T Consensus 157 L~~~~~~----------~~~~~iv~~H~P~~~~~~~~---~~~~~--------~--~~~~~~~~l~~ll~~~~V~~v~~G 213 (262)
T cd07395 157 LEIAKES----------DCKHVIVFQHIPWFLEDPDE---EDSYF--------N--IPKSVRKPLLDKFKKAGVKAVFSG 213 (262)
T ss_pred HHHHHhc----------cCCcEEEEECcCCccCCCCC---CcccC--------C--cCHHHHHHHHHHHHhcCceEEEEC
Confidence 9976421 35688999999997543211 00000 0 001123467889999999999999
Q ss_pred CCCCCceeeccCCCeeEEeccceeccCC-CCCceEEEEEecCCcee
Q psy2930 246 HTHNGCHKYHAYGKVHEYTVPSFSWRNK-NNPSFLMGYVVENSSGV 290 (293)
Q Consensus 246 H~H~~~~~~~~~~~~~~~~~~s~~~~~~-~~p~f~~~~~~~~~~~~ 290 (293)
|+|...... .+++.++++++.+...+ .+|||.++++++++++.
T Consensus 214 H~H~~~~~~--~~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 257 (262)
T cd07395 214 HYHRNAGGR--YGGLEMVVTSAIGAQLGNDKSGLRIVKVTEDKIVH 257 (262)
T ss_pred ccccCCceE--ECCEEEEEcCceecccCCCCCCcEEEEECCCceee
Confidence 999998743 34888999999886655 57999999999988743
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=218.27 Aligned_cols=236 Identities=19% Similarity=0.214 Sum_probs=159.1
Q ss_pred eEEEEEecCCcCCCCCC--chhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRG--HWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
|||+++||+|++..... .+. .......+.+.+.+++.+||+||++||+++.+.....+++.. +.+.+. ..
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~---~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~----~~~~l~-~l 72 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYY---RNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDA----VLAILD-RL 72 (267)
T ss_pred CeEEEEeccccccCCCcccchH---HHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHH----HHHHHH-hc
Confidence 69999999998765322 111 112223344556666678999999999998776332233433 444442 35
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCC---------------------
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGC--------------------- 149 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~--------------------- 149 (293)
++|++++|||||...... ......+...++.. ++.+..++++||++||......+.
T Consensus 73 ~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~-yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (267)
T cd07396 73 KGPVHHVLGNHDLYNPSR--EYLLLYTLLGLGAP-YYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLS 149 (267)
T ss_pred CCCEEEecCccccccccH--hhhhcccccCCCCc-eEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhcc
Confidence 689999999999863211 00000112223333 688899999999999965421110
Q ss_pred ------CCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccccc
Q psy2930 150 ------FLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWE 223 (293)
Q Consensus 150 ------~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (293)
..+...++|+.||+++|+.+.. +..++||++|+|+....... . ..
T Consensus 150 ~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-----------~~~~viV~~Hhp~~~~~~~~-----~-------------~~ 200 (267)
T cd07396 150 EPRFVDWNGGIGEEQLQWLRNELQEADA-----------NGEKVIIFSHFPLHPESTSP-----H-------------GL 200 (267)
T ss_pred CccceeccCcCCHHHHHHHHHHHHHHHh-----------cCCeEEEEEeccCCCCCCCc-----c-------------cc
Confidence 1245678999999999997642 45678999999986543210 0 12
Q ss_pred ccCHHHHHHHHhhc-CccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 224 CISKESTDMLLDYL-NPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 224 ~l~~~~~~~ll~~~-~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
..+.+.+.++++++ +++++|+||+|...... .+|++++++||+|.+....|-|.++.++++.+.+
T Consensus 201 ~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~--~~gi~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 266 (267)
T cd07396 201 LWNHEEVLSILRAYGCVKACISGHDHEGGYAQ--RHGIHFLTLEGMVETPPESNAFGVVIVYEDRLIL 266 (267)
T ss_pred ccCHHHHHHHHHhCCCEEEEEcCCcCCCCccc--cCCeeEEEechhhcCCCCCCceEEEEEeCCceee
Confidence 23345678899885 79999999999998643 3599999999999993256899999999998754
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-29 Score=214.11 Aligned_cols=230 Identities=16% Similarity=0.176 Sum_probs=147.3
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 86 (293)
.+..+|||+++||+|+.......... ......+.+++..+.+. .+||+||++||+++.+. .+++.. +.+.+
T Consensus 10 ~~~~~~~i~~iSD~Hl~~~~~~~~~~-~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~---~~~~~~----~~~~l 81 (275)
T PRK11148 10 AGEARVRILQITDTHLFADEHETLLG-VNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS---SEAYQH----FAEGI 81 (275)
T ss_pred CCCCCEEEEEEcCcccCCCCCCceec-cCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC---HHHHHH----HHHHH
Confidence 45677999999999985532221111 11111233333333232 37999999999999764 333433 33333
Q ss_pred cCCCCceEEEecCCCCCCCCCCCCchhHHHHHHH-hCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHH
Q psy2930 87 STPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRA-FNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAK 165 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~ 165 (293)
. ..++|++++|||||... ...+.+.+. +. ..+..+..++++||+|||.... ...+....+|++||++.
T Consensus 82 ~-~l~~Pv~~v~GNHD~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~i~Lds~~~g---~~~G~l~~~ql~wL~~~ 150 (275)
T PRK11148 82 A-PLRKPCVWLPGNHDFQP------AMYSALQDAGIS-PAKHVLIGEHWQILLLDSQVFG---VPHGELSEYQLEWLERK 150 (275)
T ss_pred h-hcCCcEEEeCCCCCChH------HHHHHHhhcCCC-ccceEEecCCEEEEEecCCCCC---CcCCEeCHHHHHHHHHH
Confidence 2 34689999999999831 111222211 11 1133445567999999997632 23455778999999999
Q ss_pred hhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEe
Q psy2930 166 LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVID 244 (293)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~ 244 (293)
|+.. ++++.||++||||...... .++. ....+.+.+.++++++ +++++|+
T Consensus 151 L~~~-------------~~~~~vv~~hH~P~~~~~~---~~d~-------------~~l~n~~~l~~ll~~~~~v~~vl~ 201 (275)
T PRK11148 151 LADA-------------PERHTLVLLHHHPLPAGCA---WLDQ-------------HSLRNAHELAEVLAKFPNVKAILC 201 (275)
T ss_pred HhhC-------------CCCCeEEEEcCCCCCCCcc---hhhc-------------cCCCCHHHHHHHHhcCCCceEEEe
Confidence 9875 4567777777766443221 1111 1233456788999998 8999999
Q ss_pred cCCCCCceeeccCCCeeEEeccceeccCC----------CCCceEEEEEecCC
Q psy2930 245 GHTHNGCHKYHAYGKVHEYTVPSFSWRNK----------NNPSFLMGYVVENS 287 (293)
Q Consensus 245 GH~H~~~~~~~~~~~~~~~~~~s~~~~~~----------~~p~f~~~~~~~~~ 287 (293)
||+|...... .+|++.+.+||+|++.. ..|||.++++.+++
T Consensus 202 GH~H~~~~~~--~~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~g 252 (275)
T PRK11148 202 GHIHQELDLD--WNGRRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHADG 252 (275)
T ss_pred cccChHHhce--ECCEEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCCC
Confidence 9999986542 34899999999986532 23799999998776
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=205.57 Aligned_cols=220 Identities=19% Similarity=0.256 Sum_probs=149.2
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
||+++||+|++......+... . .....+.+.+.+++. +||+||++|||++.+. .+++.. +.+.+. ..+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~-~-~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~---~~~~~~----~~~~l~-~~~ 70 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGV-D-TAASLEAVLAHINALHPRPDLVLVTGDLTDDGS---PESYER----LRELLA-ALP 70 (240)
T ss_pred CEEEEeCCccCCCCcceecCc-C-HHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC---HHHHHH----HHHHHh-hcC
Confidence 699999999986532111000 0 111234455556665 9999999999999765 233433 333332 347
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHH
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAK 165 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~ 165 (293)
+|+++++||||.. ..+.+.++. ..++.+..++++|+++|+..... ..+...++|++||++.
T Consensus 71 ~p~~~v~GNHD~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~---~~~~~~~~ql~wL~~~ 137 (240)
T cd07402 71 IPVYLLPGNHDDR----------AAMRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQ---HGGELCAAQLDWLEAA 137 (240)
T ss_pred CCEEEeCCCCCCH----------HHHHHhhccccccccccceeEecCCEEEEEEeCCCCCC---cCCEECHHHHHHHHHH
Confidence 8999999999974 122333332 12578889999999999866322 2234678899999999
Q ss_pred hhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEe
Q psy2930 166 LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVID 244 (293)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~ 244 (293)
|+.. ++.++|+++|+|+...... ..+. +...+.+.+.+++.++ +++++|+
T Consensus 138 L~~~-------------~~~~~il~~H~pp~~~~~~---~~~~-------------~~~~~~~~~~~~l~~~~~v~~v~~ 188 (240)
T cd07402 138 LAEA-------------PDKPTLVFLHHPPFPVGIA---WMDA-------------IGLRNAEALAAVLARHPNVRAILC 188 (240)
T ss_pred HHhC-------------CCCCEEEEECCCCccCCch---hhhh-------------hhCCCHHHHHHHHhcCCCeeEEEE
Confidence 9865 4578999999999654321 0000 1123355778899999 8999999
Q ss_pred cCCCCCceeeccCCCeeEEeccceeccCC----------CCCceEEEEEecCC
Q psy2930 245 GHTHNGCHKYHAYGKVHEYTVPSFSWRNK----------NNPSFLMGYVVENS 287 (293)
Q Consensus 245 GH~H~~~~~~~~~~~~~~~~~~s~~~~~~----------~~p~f~~~~~~~~~ 287 (293)
||+|...... .++++.++++|++++.. ..+||..+++.+++
T Consensus 189 GH~H~~~~~~--~~g~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
T cd07402 189 GHVHRPIDGS--WGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRALSLHEDG 239 (240)
T ss_pred CCcCchHHeE--ECCEEEEEcCcceeeecCCCCcccccccCCCCcEEEEecCC
Confidence 9999987643 35899999999987643 24689989887664
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >KOG3662|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=208.62 Aligned_cols=275 Identities=29% Similarity=0.483 Sum_probs=190.2
Q ss_pred CCCCCCC---CCCCceEEEEEecCCcCC----CCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChh
Q psy2930 1 CNWPASP---ESINNIKAIFIADTHLLG----PFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGE 73 (293)
Q Consensus 1 ~~w~~~~---~~~~~~ri~~iSD~H~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~ 73 (293)
|.||.+. .++..+|++.+||+|+-+ .....|++++.+++++++.+.......+||.++++|||+++|.+.+++
T Consensus 34 c~Wp~~~~~~~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~e 113 (410)
T KOG3662|consen 34 CQWPGKKQWASNENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDE 113 (410)
T ss_pred ccCCccccccCCCCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChH
Confidence 9999998 446789999999999987 334578999999999999999998889999999999999999999999
Q ss_pred hHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCC-C
Q psy2930 74 DFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFL-C 152 (293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~-~ 152 (293)
+|.+.+++|+++++.+..+|++.+|||||+++.....++..++|++.|+.. ...+.++++.|+++|+..+.+..... .
T Consensus 114 Ef~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~fg~~-~r~f~v~~~tf~~~d~~~ls~~~~~~~~ 192 (410)
T KOG3662|consen 114 EFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVFGPT-ERRFDVGNLTFVMFDSNALSGNPDINVL 192 (410)
T ss_pred HHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhhcch-hhhhccCCceeEEeeehhhcCCCchhhh
Confidence 999999999999976679999999999999998888888899999999974 68899999999999999887764321 1
Q ss_pred chhHHHHHHHHHHhhh----ccc--CCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccc-ccccccc
Q psy2930 153 KPAQDRISLISAKLKC----CRK--DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKF-RQRWECI 225 (293)
Q Consensus 153 ~~~~~~l~~l~~~l~~----~~~--~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 225 (293)
......++...-.... ... +..+.......+..|.++ .|+|++......|...+....++..+.. ++-....
T Consensus 193 ~~~~~fl~~~~~~~~~~~r~~~~h~p~~~~~~p~l~~~~p~~~-~h~ply~g~~~qc~~~~~~~~~~~~e~~~~~~~~~~ 271 (410)
T KOG3662|consen 193 SEARDFLNSVSTSGDGYPRILLAHDPDLYGIKPELPTSGPDRL-QHIPLYSGSAAQCLFEPATKVIELNENIEREFDLSG 271 (410)
T ss_pred hhhhhhhcccccCCCCcceeeecccchhccCCcccCCCccccc-ccceeecccccccccccccchHHHhhhhhhhccccc
Confidence 1111122111100000 000 000011111112233333 3777776644455443333312111111 1111222
Q ss_pred CHHHHHHHHhhcCccEEEecCCCCCceeeccC--CCeeEEeccceeccCCCCCce
Q psy2930 226 SKESTDMLLDYLNPRLVIDGHTHNGCHKYHAY--GKVHEYTVPSFSWRNKNNPSF 278 (293)
Q Consensus 226 ~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~--~~~~~~~~~s~~~~~~~~p~f 278 (293)
+.+...+++. ..+.+++.||+|..+...+.. .+..++++++++++.+..++|
T Consensus 272 ~~~~~~~l~~-~~~~~~~~g~~~~~~~~k~~~~~~g~~~~tv~~~s~~~~~~~~~ 325 (410)
T KOG3662|consen 272 DDEDHCSLLK-LNYKLVVGGHDHKEYNDKHASMSSGALEYTVLLLSLRFGQDFNM 325 (410)
T ss_pred ccccceEEee-cccccccCCcCccccccccccccccccccchhhhhhhccccHHH
Confidence 3334444554 578999999999987755432 478999999999887644433
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=193.11 Aligned_cols=235 Identities=18% Similarity=0.162 Sum_probs=152.1
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCC-CCccCC-hhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLD-EGQYVG-GEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 90 (293)
++|++++|...+.... ...+.+++.+.+++.+||+||++||++. .|.... +..+...++.+.+.+ ..
T Consensus 1 ~~f~~~gD~g~~~~~~---------~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~--~~ 69 (277)
T cd07378 1 LRFLALGDWGGGGTAG---------QKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAP--SL 69 (277)
T ss_pred CeEEEEeecCCCCCHH---------HHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccch--hh
Confidence 5899999997641111 1124455666666789999999999974 443221 233433333333322 25
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHH-HHHH--hCCCCcceEEeC------CEEEEEEeceeccCCC--------CCCCc
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDR-FSRA--FNSSMVKLLSIK------GSYFVLINSMALEGDG--------CFLCK 153 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~------~~~~i~lds~~~~~~~--------~~~~~ 153 (293)
++|+++++||||.............. +... ++. .+|.+..+ +++||+|||..+.... ...+.
T Consensus 70 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~ 148 (277)
T cd07378 70 QVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPA-YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGK 148 (277)
T ss_pred cCCeEEecCCcccCCCchheeehhccCCCCCccCcc-hheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchh
Confidence 78999999999986321111000000 0001 122 25677776 7999999999875332 12345
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHH
Q psy2930 154 PAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDML 233 (293)
Q Consensus 154 ~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 233 (293)
...+|++||++.|+.+ +..++||++|||++...... . + ...+..+.++
T Consensus 149 ~~~~Q~~wL~~~L~~~-------------~~~~~iv~~H~P~~~~~~~~--~-~----------------~~~~~~l~~l 196 (277)
T cd07378 149 LAEEQLAWLEKTLAAS-------------TADWKIVVGHHPIYSSGEHG--P-T----------------SCLVDRLLPL 196 (277)
T ss_pred hHHHHHHHHHHHHHhc-------------CCCeEEEEeCccceeCCCCC--C-c----------------HHHHHHHHHH
Confidence 7789999999999875 44688999999997643210 0 0 0113467889
Q ss_pred HhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-----------------CCCCceEEEEEecCCceee
Q psy2930 234 LDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-----------------KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 234 l~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-----------------~~~p~f~~~~~~~~~~~~~ 291 (293)
+++++++++|+||+|..........+++++++++.+... ....||.+++++++.++++
T Consensus 197 ~~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~~l~~~ 271 (277)
T cd07378 197 LKKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKEELTVR 271 (277)
T ss_pred HHHcCCCEEEeCCcccceeeecCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecCEEEEE
Confidence 999999999999999998765333488999998766321 1236999999999987765
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=194.51 Aligned_cols=208 Identities=16% Similarity=0.154 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChh------hHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCC
Q psy2930 38 EWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGE------DFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL 109 (293)
Q Consensus 38 ~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~ 109 (293)
.+.+.+++.+.+++. +||+||++||++..+...... .+....+.+.+.+ .++|++.++||||.......
T Consensus 51 p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~pv~~~~GNHD~~p~~~~ 127 (296)
T cd00842 51 PWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAF---PDTPVYPALGNHDSYPVNQF 127 (296)
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhC---CCCCEEEcCCCCCCCccccc
Confidence 356777777777777 999999999999976532211 1233444454443 68999999999998643211
Q ss_pred C-----chhH----HHHHHHhC--------CCCcceEE-eCCEEEEEEeceeccCCCCC----CCchhHHHHHHHHHHhh
Q psy2930 110 H-----PYLN----DRFSRAFN--------SSMVKLLS-IKGSYFVLINSMALEGDGCF----LCKPAQDRISLISAKLK 167 (293)
Q Consensus 110 ~-----~~~~----~~~~~~~~--------~~~~~~~~-~~~~~~i~lds~~~~~~~~~----~~~~~~~~l~~l~~~l~ 167 (293)
. .... +.|..... ...||++. .+++++|+|||+.+...... .......|++||+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~ 207 (296)
T cd00842 128 PPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQ 207 (296)
T ss_pred CCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHH
Confidence 1 1112 22322222 12356666 79999999999987543221 22345789999999999
Q ss_pred hcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcC--ccEEEec
Q psy2930 168 CCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLN--PRLVIDG 245 (293)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~--~~lvl~G 245 (293)
.+++ .+.+++|++|+|+....... . ....+.+.++++++. +.++|+|
T Consensus 208 ~a~~-----------~~~~v~I~~HiPp~~~~~~~---~-----------------~~~~~~~~~ii~~y~~~i~~~~~G 256 (296)
T cd00842 208 EAEQ-----------AGEKVWIIGHIPPGVNSYDT---L-----------------ENWSERYLQIINRYSDTIAGQFFG 256 (296)
T ss_pred HHHH-----------CCCeEEEEeccCCCCccccc---c-----------------hHHHHHHHHHHHHHHHhhheeeec
Confidence 8754 56778999999996543210 0 011246788999996 7799999
Q ss_pred CCCCCceeeccC------CCeeEEeccceeccCCCCCceE
Q psy2930 246 HTHNGCHKYHAY------GKVHEYTVPSFSWRNKNNPSFL 279 (293)
Q Consensus 246 H~H~~~~~~~~~------~~~~~~~~~s~~~~~~~~p~f~ 279 (293)
|+|......... -....+++||++...+++|||+
T Consensus 257 H~H~d~~~~~~~~~~~~~~~~~~~~~psitp~~~~nP~~r 296 (296)
T cd00842 257 HTHRDEFRVFYDDNDTGEPINVALIAPSVTPYSGNNPGFR 296 (296)
T ss_pred ccccceEEEEeCCCCCCCceEEEEecCccCcCCCCCCCCC
Confidence 999998755221 1578999999999999999984
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=184.63 Aligned_cols=196 Identities=16% Similarity=0.142 Sum_probs=124.2
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccC------ChhhHHHHHHHHHhhhcC
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYV------GGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~------~~~~~~~~~~~~~~~~~~ 88 (293)
|+++||+|++........ ...+.+.+.+++.+||+||++||+++.+... .+.+|..+.+.+.+...
T Consensus 2 ~~~iSDlH~g~~~~~~~~-------~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 73 (256)
T cd07401 2 FVHISDIHVSSFHPPNRA-------QDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV- 73 (256)
T ss_pred EEEecccccCCcCchhhh-------hHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC-
Confidence 799999999865432110 0123466777889999999999999865421 12234343333333211
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC---CC-cceEE--eCCEEEEEEeceeccCCCC---CCCchhHHHH
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS---SM-VKLLS--IKGSYFVLINSMALEGDGC---FLCKPAQDRI 159 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~--~~~~~~i~lds~~~~~~~~---~~~~~~~~~l 159 (293)
....|++.++||||++..... ......|+++.+. .. ++... .++++||+|||..+.+... ..+...++|+
T Consensus 74 ~~~~p~~~v~GNHD~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql 152 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIPSL-DSENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLL 152 (256)
T ss_pred CCcceEEEeCCCCCcCCCCCc-cchhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHH
Confidence 235799999999999532111 1112344444433 21 22222 3899999999987533221 2356778999
Q ss_pred HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCc
Q psy2930 160 SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNP 239 (293)
Q Consensus 160 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~ 239 (293)
+||++.|+.+. ...++||++|+|+...... . ......+.++++++++
T Consensus 153 ~wL~~~L~~~~------------~~~~~IV~~HhP~~~~~~~---~------------------~~~~~~~~~ll~~~~v 199 (256)
T cd07401 153 DRLEKELEKST------------NSNYTIWFGHYPTSTIISP---S------------------AKSSSKFKDLLKKYNV 199 (256)
T ss_pred HHHHHHHHhcc------------cCCeEEEEEcccchhccCC---C------------------cchhHHHHHHHHhcCC
Confidence 99999998653 3457899999998432110 0 0001126788999999
Q ss_pred cEEEecCCCCCce
Q psy2930 240 RLVIDGHTHNGCH 252 (293)
Q Consensus 240 ~lvl~GH~H~~~~ 252 (293)
+++||||+|....
T Consensus 200 ~~vl~GH~H~~~~ 212 (256)
T cd07401 200 TAYLCGHLHPLGG 212 (256)
T ss_pred cEEEeCCccCCCc
Confidence 9999999999987
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-24 Score=177.74 Aligned_cols=202 Identities=18% Similarity=0.227 Sum_probs=131.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++||+|++....... +. ...+.+.+.+++.+||+|+++||+++.+. ...+|....+.+..+- ..++
T Consensus 1 f~~~~~~D~q~~~~~~~~~---~~---~~~~~i~~~~~~~~~d~iv~~GDl~~~~~--~~~~~~~~~~~~~~l~--~~~~ 70 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEV---FD---AQTDWIVDNAEALNIAFVLHLGDIVDDGD--NDAEWEAADKAFARLD--KAGI 70 (214)
T ss_pred CEEEEecCCCcCCcCCHHH---HH---HHHHHHHHHHHHcCCCEEEECCCccCCCC--CHHHHHHHHHHHHHHH--HcCC
Confidence 6899999999976533221 11 12233455556679999999999999765 2345666555554443 2578
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccC
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD 172 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~ 172 (293)
|+++++||||. ++.+|+. ...+|++||++.|+..
T Consensus 71 p~~~~~GNHD~--------------------------------~~~ld~~-----------~~~~ql~WL~~~L~~~--- 104 (214)
T cd07399 71 PYSVLAGNHDL--------------------------------VLALEFG-----------PRDEVLQWANEVLKKH--- 104 (214)
T ss_pred cEEEECCCCcc--------------------------------hhhCCCC-----------CCHHHHHHHHHHHHHC---
Confidence 99999999991 2223221 2378999999999864
Q ss_pred CCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEecCCCCCc
Q psy2930 173 RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVIDGHTHNGC 251 (293)
Q Consensus 173 ~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~GH~H~~~ 251 (293)
++.++|+++|+|+...... ++... +... ..-..+.+.++++++ +++++|+||.|...
T Consensus 105 ----------~~~~~iv~~H~p~~~~~~~----~~~~~-------~~~~-~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~ 162 (214)
T cd07399 105 ----------PDRPAILTTHAYLNCDDSR----PDSID-------YDSD-VNDGQQIWDKLVKKNDNVFMVLSGHVHGAG 162 (214)
T ss_pred ----------CCCCEEEEecccccCCCCc----Ccccc-------cccc-cccHHHHHHHHHhCCCCEEEEEccccCCCc
Confidence 5678999999999754321 11100 0000 011123577899988 79999999999997
Q ss_pred eeec---c-CC-CeeEEeccceeccCCCCCceEEEEEecCCceeee
Q psy2930 252 HKYH---A-YG-KVHEYTVPSFSWRNKNNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 252 ~~~~---~-~~-~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~~~ 292 (293)
.... . .| .++.+.+..-....+++|.|++++|++++.+|.+
T Consensus 163 ~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~ 208 (214)
T cd07399 163 RTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDV 208 (214)
T ss_pred eEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEE
Confidence 6543 1 12 2555555442333457899999999999866654
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=189.91 Aligned_cols=236 Identities=16% Similarity=0.153 Sum_probs=146.7
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-hcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-LHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
..++||++++|+|.+..... +.+.++++ ..+||+||++||+++.+......+|..+.+.+..+.
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~-------------~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~-- 66 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNST-------------NTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA-- 66 (294)
T ss_pred CCcEEEEEEEECCCCCCCcH-------------HHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--
Confidence 46799999999998522111 11222222 379999999999997654332345666666665554
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhH--HHHHHHh-----CCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHH
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLN--DRFSRAF-----NSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISL 161 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~ 161 (293)
..+|+++++||||............ ..+.... ....+|.+..++++||+|||..... .+....+|++|
T Consensus 67 -~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~----~~~~~~~q~~W 141 (294)
T cd00839 67 -SYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFY----GDGPGSPQYDW 141 (294)
T ss_pred -hcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccc----cCCCCcHHHHH
Confidence 4689999999999965321111000 0000000 1123688999999999999976432 22356789999
Q ss_pred HHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccE
Q psy2930 162 ISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRL 241 (293)
Q Consensus 162 l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~l 241 (293)
|++.|+.+.+. ...++|+++|+|++........ .. ...-.++.+.++++++++++
T Consensus 142 L~~~L~~~~~~----------~~~~~iv~~H~P~~~~~~~~~~---~~------------~~~~~~~~l~~ll~~~~v~~ 196 (294)
T cd00839 142 LEADLAKVDRS----------KTPWIIVMGHRPMYCSNTDHDD---CI------------EGEKMRAALEDLFYKYGVDL 196 (294)
T ss_pred HHHHHHHhccc----------CCCeEEEEeccCcEecCccccc---cc------------hhHHHHHHHHHHHHHhCCCE
Confidence 99999976320 1235788999999765432100 00 01112346788999999999
Q ss_pred EEecCCCCCceeec--------------cCCCeeEEeccceeccC----------------CCCCceEEEEEecC-Ccee
Q psy2930 242 VIDGHTHNGCHKYH--------------AYGKVHEYTVPSFSWRN----------------KNNPSFLMGYVVEN-SSGV 290 (293)
Q Consensus 242 vl~GH~H~~~~~~~--------------~~~~~~~~~~~s~~~~~----------------~~~p~f~~~~~~~~-~~~~ 290 (293)
+|+||+|.+.+... ...++.++++++..... ....||.++++..+ .+++
T Consensus 197 vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~ 276 (294)
T cd00839 197 VLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHF 276 (294)
T ss_pred EEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEE
Confidence 99999999976432 11256677766533111 13468888888876 3443
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-24 Score=170.13 Aligned_cols=165 Identities=30% Similarity=0.589 Sum_probs=133.9
Q ss_pred EEEecCCcCCCCCCc----hhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 16 IFIADTHLLGPFRGH----WFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+++||+|+-+..... |+.++.+++++.+++..+++..+||+|+++|||++.|...++++|.+.+++|.+++....+
T Consensus 1 llvADPqllg~~~~~~~~~~~~~~~~D~yl~r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~ 80 (195)
T cd08166 1 LLVADPQILGYQNENFGLGWIARWDSDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNG 80 (195)
T ss_pred CcccCccccCCCCCCccccHHHHHHHHHHHHHHHHHHHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 478999998765433 7788889999999999999999999999999999999988888899999999999877789
Q ss_pred ceEEEecCCCCCCCC-CCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcc
Q psy2930 92 TELHVVPGNHDMGFH-YRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCR 170 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~ 170 (293)
+|++.||||||++.. ....+...++|++.|
T Consensus 81 ~~~~~VpGNHDIG~~~~~~~~~~v~RF~~~F------------------------------------------------- 111 (195)
T cd08166 81 TKIIYLPGDNDIGGEEEDPIESKIRRFEKYF------------------------------------------------- 111 (195)
T ss_pred CcEEEECCCCCcCCCCCCcCHHHHHHHHHhh-------------------------------------------------
Confidence 999999999999863 334456678888777
Q ss_pred cCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 171 KDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 171 ~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
|+++|.|+..... ..+..++.++.+.++|+||.|..
T Consensus 112 -----------------i~lsH~P~~~~~~---------------------------~~~~~~~~~~~p~~Ifs~H~H~s 147 (195)
T cd08166 112 -----------------IMLSHVPLLAEGG---------------------------QALKHVVTDLDPDLIFSAHRHKS 147 (195)
T ss_pred -----------------eeeeccccccccc---------------------------HHHHHHHHhcCceEEEEcCccce
Confidence 4788999854332 26788889999999999999999
Q ss_pred ceeeccC------------------------C-CeeEEeccceeccCC
Q psy2930 251 CHKYHAY------------------------G-KVHEYTVPSFSWRNK 273 (293)
Q Consensus 251 ~~~~~~~------------------------~-~~~~~~~~s~~~~~~ 273 (293)
....... . -+.||.+|++|++.|
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ei~vptcsyrmg 195 (195)
T cd08166 148 SIFMYDRLLRQNSLFTRVSPDDPTLKQLILQNEVMHEIQVPTCSYRMG 195 (195)
T ss_pred eeEEeecccchhheeeeccCCcchHHHhhcCCcceEEEECCcccccCC
Confidence 8654211 1 267888888887754
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=164.05 Aligned_cols=156 Identities=55% Similarity=1.037 Sum_probs=114.5
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEE
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELH 95 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (293)
+++||+|++....+.+++++.++..+.+.+.+.+++.+||+|+++||+++.+.......|.....++.+++....++|++
T Consensus 1 ~~isD~HL~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 80 (156)
T cd08165 1 MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLH 80 (156)
T ss_pred CccccchhcCCcccHHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEE
Confidence 46899999766555666777777888889999999999999999999999876555566777777888776423468999
Q ss_pred EecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCCC
Q psy2930 96 VVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDREC 175 (293)
Q Consensus 96 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~ 175 (293)
+++||||.+...... ..-+++.++.
T Consensus 81 ~v~GNHD~~~~~~~~---------------------------------------------~~~~~~~~~~---------- 105 (156)
T cd08165 81 VVVGNHDIGFHYEMT---------------------------------------------TYKLERFEKV---------- 105 (156)
T ss_pred EEcCCCCcCCCCccC---------------------------------------------HHHHHHHHHH----------
Confidence 999999985311101 1112222211
Q ss_pred CccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeec
Q psy2930 176 PKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYH 255 (293)
Q Consensus 176 ~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~ 255 (293)
.|+++|.|... ++.++++.++||||+|......+
T Consensus 106 -----------~~~l~H~p~~~-----------------------------------~~~~~~~~~~l~GH~H~~~~~~~ 139 (156)
T cd08165 106 -----------FILLQHFPLYR-----------------------------------LLQWLKPRLVLSGHTHSFCEVTH 139 (156)
T ss_pred -----------eeeeeCChHHH-----------------------------------HHHhhCCCEEEEcccCCCceeEE
Confidence 27888988611 23334788999999999887765
Q ss_pred cCCCeeEEeccceeccCC
Q psy2930 256 AYGKVHEYTVPSFSWRNK 273 (293)
Q Consensus 256 ~~~~~~~~~~~s~~~~~~ 273 (293)
. ++++++++||+||+++
T Consensus 140 ~-~~~~e~~~~~~~~~~~ 156 (156)
T cd08165 140 P-DGTPEVTVPSFSWRNR 156 (156)
T ss_pred E-CCEEEEEEecceecCC
Confidence 5 4999999999999874
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=168.76 Aligned_cols=208 Identities=14% Similarity=0.082 Sum_probs=129.4
Q ss_pred EEEEecCCcCCCCC---CchhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 15 AIFIADTHLLGPFR---GHWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 15 i~~iSD~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
|.++||+|+...-. ..+-+. ...+.+++.+.+++. +||+||++||+++.+. ........+.+.+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~---~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~---~~~~~~~l~~l~~----- 69 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPE---WKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK---LEEAKLDLAWIDA----- 69 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCcc---HHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC---hHHHHHHHHHHHh-----
Confidence 46899999974211 111111 123445566666666 9999999999997543 1122232333332
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC-----CcceEEeCCEEEEEEeceeccCCCC----------CCCch
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-----MVKLLSIKGSYFVLINSMALEGDGC----------FLCKP 154 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~lds~~~~~~~~----------~~~~~ 154 (293)
...|+++|+||||.+.. ..+.+++.+... .+..+.++++.|++++.-.+.+... ..+..
T Consensus 70 l~~~v~~V~GNHD~~~~------~~~~~~~~l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
T cd07393 70 LPGTKVLLKGNHDYWWG------SASKLRKALEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKI 143 (232)
T ss_pred CCCCeEEEeCCccccCC------CHHHHHHHHHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHH
Confidence 23478999999998421 124444444332 1456677889999875322221110 11233
Q ss_pred hHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHH
Q psy2930 155 AQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLL 234 (293)
Q Consensus 155 ~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll 234 (293)
...++.||++.|+.+.... ...++|+++|+|++.... +...+.+++
T Consensus 144 ~~~~l~~l~~~L~~~~~~~---------~~~~~i~~~H~p~~~~~~-------------------------~~~~~~~~~ 189 (232)
T cd07393 144 FERELERLELSLKAAKKRE---------KEKIKIVMLHYPPANENG-------------------------DDSPISKLI 189 (232)
T ss_pred HHHHHHHHHHHHHHHHhCC---------CCCCEEEEECCCCcCCCC-------------------------CHHHHHHHH
Confidence 4678999999998753200 224689999999865321 112456788
Q ss_pred hhcCccEEEecCCCCCceee---ccCCCeeEEeccceeccCC
Q psy2930 235 DYLNPRLVIDGHTHNGCHKY---HAYGKVHEYTVPSFSWRNK 273 (293)
Q Consensus 235 ~~~~~~lvl~GH~H~~~~~~---~~~~~~~~~~~~s~~~~~~ 273 (293)
++.+++++|+||+|.+.... ...++++++++|+.|++..
T Consensus 190 ~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~~~ 231 (232)
T cd07393 190 EEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLNFQ 231 (232)
T ss_pred HHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhcCcc
Confidence 88899999999999997532 1235899999999998763
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=181.96 Aligned_cols=208 Identities=18% Similarity=0.167 Sum_probs=129.3
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
..++||++++|+|... +.. ...+.+.+.+||+||++|||+.... ....|..+.+.+..+.
T Consensus 137 ~~~~~f~v~GDlG~~~-----~~~----------~tl~~i~~~~pD~vl~~GDl~y~~~--~~~~wd~f~~~i~~l~--- 196 (427)
T PLN02533 137 KFPIKFAVSGDLGTSE-----WTK----------STLEHVSKWDYDVFILPGDLSYANF--YQPLWDTFGRLVQPLA--- 196 (427)
T ss_pred CCCeEEEEEEeCCCCc-----ccH----------HHHHHHHhcCCCEEEEcCccccccc--hHHHHHHHHHHhhhHh---
Confidence 3679999999997522 111 1223345679999999999998543 2234444444344333
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC---------CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHH
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS---------SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRIS 160 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~ 160 (293)
..+|+++++||||..............|.+.|.. ..+|.+..++++||+||+.... ....+|++
T Consensus 197 s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~-------~~~~~Q~~ 269 (427)
T PLN02533 197 SQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDF-------EPGSEQYQ 269 (427)
T ss_pred hcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccc-------cCchHHHH
Confidence 4689999999999853210001111223222221 1368899999999999885411 23568999
Q ss_pred HHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCcc
Q psy2930 161 LISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR 240 (293)
Q Consensus 161 ~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~ 240 (293)
||++.|+..... ...++|+++|+|++.......+... ....++.+.+++.+++++
T Consensus 270 WLe~dL~~~~r~----------~~pwiIv~~H~P~y~s~~~~~~~~~---------------~~~~r~~le~Ll~~~~Vd 324 (427)
T PLN02533 270 WLENNLKKIDRK----------TTPWVVAVVHAPWYNSNEAHQGEKE---------------SVGMKESMETLLYKARVD 324 (427)
T ss_pred HHHHHHHhhccc----------CCCEEEEEeCCCeeecccccCCcch---------------hHHHHHHHHHHHHHhCCc
Confidence 999999875320 2234788899999865421100000 011134678899999999
Q ss_pred EEEecCCCCCceeecc------CCCeeEEecccee
Q psy2930 241 LVIDGHTHNGCHKYHA------YGKVHEYTVPSFS 269 (293)
Q Consensus 241 lvl~GH~H~~~~~~~~------~~~~~~~~~~s~~ 269 (293)
++|+||.|.+.+...- ..+..+|++++..
T Consensus 325 lvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG 359 (427)
T PLN02533 325 LVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGG 359 (427)
T ss_pred EEEecceecccccccccCCccCCCCCEEEEeCCCc
Confidence 9999999998764211 1245667777644
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=159.90 Aligned_cols=157 Identities=39% Similarity=0.753 Sum_probs=115.9
Q ss_pred EEEecCCcCCCCCC---c----hhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 16 IFIADTHLLGPFRG---H----WFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 16 ~~iSD~H~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
+++||+|++..... . ++.....++++.+.+...++..+||+||++||+++.+......+|.+..+++++++..
T Consensus 1 llvaDpql~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T cd07384 1 LLVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFL 80 (171)
T ss_pred CcccCccccCCCCCCCCchhhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcc
Confidence 47899999976531 1 1444556778999999999999999999999999987766556788888888887742
Q ss_pred CC----CceEEEecCCCCCCCCCCCC-chhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHH
Q psy2930 89 PD----GTELHVVPGNHDMGFHYRLH-PYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLIS 163 (293)
Q Consensus 89 ~~----~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~ 163 (293)
.. ++|+++|+||||++...... ....++|+..|
T Consensus 81 ~~~~~~~~~~~~v~GNHD~g~~~~~~~~~~~~~f~~~f------------------------------------------ 118 (171)
T cd07384 81 PSNGLEDIPVYYVPGNHDIGYGEVISFPEVVDRFERYF------------------------------------------ 118 (171)
T ss_pred cccccCCceEEEECCccccCCCCccccHHHHHHHHhhh------------------------------------------
Confidence 22 68999999999997532111 12223333332
Q ss_pred HHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEE
Q psy2930 164 AKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVI 243 (293)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl 243 (293)
|+++|.|.+. ++++.+++++|
T Consensus 119 ------------------------i~l~H~p~~~-----------------------------------~~~~~~~~~~l 139 (171)
T cd07384 119 ------------------------ILLTHIPLYR-----------------------------------LLDTIKPVLIL 139 (171)
T ss_pred ------------------------eeEECCccHH-----------------------------------HHhccCceEEE
Confidence 6888988621 34445799999
Q ss_pred ecCCCCCceeeccC--CCeeEEeccceeccCC
Q psy2930 244 DGHTHNGCHKYHAY--GKVHEYTVPSFSWRNK 273 (293)
Q Consensus 244 ~GH~H~~~~~~~~~--~~~~~~~~~s~~~~~~ 273 (293)
|||+|..+...+.. +.++|++++|+||+.|
T Consensus 140 sGH~H~~~~~~~~~~~~~~~ei~v~S~s~~~~ 171 (171)
T cd07384 140 SGHDHDQCEVVHSSKAGSVREITVKSFSWRMG 171 (171)
T ss_pred eCcccCCeEEEecCCCCCceEEeeccchhhcc
Confidence 99999998877653 6899999999998764
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-21 Score=162.25 Aligned_cols=208 Identities=17% Similarity=0.113 Sum_probs=123.8
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCce
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTE 93 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (293)
||+++||+|+.....+ .....+++.+.+++.++|+||++||+++... +....++.+.+. .++|
T Consensus 1 ki~~iSDlH~~~~~~~--------~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~-----~~~~~~~~l~~~----~~~p 63 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFD--------TEEMLETLAQYLKKQKIDHLHIAGDISNDFQ-----RSLPFIEKLQEL----KGIK 63 (239)
T ss_pred CEEEEEeecCCCCCCC--------HHHHHHHHHHHHHhcCCCEEEECCccccchh-----hHHHHHHHHHHh----cCCc
Confidence 6899999998522111 1112344556666779999999999998531 222334444442 3579
Q ss_pred EEEecCCCCCCCCCCCCchhHHHHHHHh----CCCCcceEEeCCEEEEEEeceecc---------------------C--
Q psy2930 94 LHVVPGNHDMGFHYRLHPYLNDRFSRAF----NSSMVKLLSIKGSYFVLINSMALE---------------------G-- 146 (293)
Q Consensus 94 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~lds~~~~---------------------~-- 146 (293)
+++++||||.+... . ...+++.+ -......+..++++|++++.-.-. +
T Consensus 64 v~~v~GNHD~~~~~--~---~~~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (239)
T TIGR03729 64 VTFNAGNHDMLKDL--T---YEEIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRI 138 (239)
T ss_pred EEEECCCCCCCCCC--C---HHHHHhccchhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeeccc
Confidence 99999999985221 1 12233221 111123334588999999741100 0
Q ss_pred -CCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccccccc
Q psy2930 147 -DGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECI 225 (293)
Q Consensus 147 -~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 225 (293)
...........+++||++.|++. .+.++|+++|+||...... .+.+. + .|.......
T Consensus 139 ~~~~~~~~~~~~~l~~l~~~l~~~-------------~~~~~ivvtH~pP~~~~~~--~~~~~-~------~~~~~~~~~ 196 (239)
T TIGR03729 139 KRPMSDPERTAIVLKQLKKQLNQL-------------DNKQVIFVTHFVPHRDFIY--VPMDH-R------RFDMFNAFL 196 (239)
T ss_pred CCCCChHHHHHHHHHHHHHHHHhc-------------CCCCEEEEEcccchHHHhc--CCCCC-c------chhhhhhcc
Confidence 00112234578899999999765 4578999999999653210 00000 0 000000123
Q ss_pred CHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEecc
Q psy2930 226 SKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVP 266 (293)
Q Consensus 226 ~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~ 266 (293)
+.+.+.++++++++++++|||+|...... ..+++++++++
T Consensus 197 ~s~~l~~li~~~~v~~~i~GH~H~~~~~~-~i~~~~~~~~~ 236 (239)
T TIGR03729 197 GSQHFGQLLVKYEIKDVIFGHLHRRFGPL-TIGGTTYHNRP 236 (239)
T ss_pred ChHHHHHHHHHhCCCEEEECCccCCCCCE-EECCEEEEecC
Confidence 44678889999999999999999997432 23578888764
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=166.53 Aligned_cols=241 Identities=13% Similarity=0.062 Sum_probs=151.9
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCcc-CChhhHHHHHHHHHhhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQY-VGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~-~~~~~~~~~~~~~~~~~ 86 (293)
.-+..+||+.++|. |.....+ +...+.+.+..++.++|+|+-+||.++.|.. .++..|...++..-.--
T Consensus 22 ~~~~~l~F~~vGDw--G~g~~~Q--------~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~ 91 (394)
T PTZ00422 22 SVKAQLRFASLGNW--GTGSKQQ--------KLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEE 91 (394)
T ss_pred ccCCeEEEEEEecC--CCCchhH--------HHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCc
Confidence 34567899999999 4322111 1244556666677899999999999876663 34455655544443321
Q ss_pred cCCCCceEEEecCCCCCCCCCC--CCchhH-----------------HHHHHHhCCCCcceE----EeC-----------
Q psy2930 87 STPDGTELHVVPGNHDMGFHYR--LHPYLN-----------------DRFSRAFNSSMVKLL----SIK----------- 132 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~----~~~----------- 132 (293)
.....+|+++|+||||..-... ...... ....++.-+..+|.+ ..+
T Consensus 92 s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~ 171 (394)
T PTZ00422 92 SGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHK 171 (394)
T ss_pred chhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCC
Confidence 0015689999999999732111 100000 000111111123322 211
Q ss_pred --CEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCch
Q psy2930 133 --GSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAP 210 (293)
Q Consensus 133 --~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~ 210 (293)
.+.|+++||..+... .........+.+||+++|+.+.+ ..+++||+.|||++..+.. ++.
T Consensus 172 ~~~v~fifiDT~~l~~~-~~~~~~~~~~w~~L~~~L~~a~k-----------~a~WkIVvGHhPIySsG~h--g~~---- 233 (394)
T PTZ00422 172 DMSVAFIFIDTWILSSS-FPYKKVSERAWQDLKATLEYAPK-----------IADYIIVVGDKPIYSSGSS--KGD---- 233 (394)
T ss_pred CCEEEEEEEECchhccc-CCccccCHHHHHHHHHHHHhhcc-----------CCCeEEEEecCceeecCCC--CCC----
Confidence 279999999877642 22223356788999999975433 4579999999999876531 110
Q ss_pred hhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-------------CCCCc
Q psy2930 211 DIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-------------KNNPS 277 (293)
Q Consensus 211 ~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-------------~~~p~ 277 (293)
..+ ...+..+|++++++++++||.|..+... .+++.++++++.+-.. ...+|
T Consensus 234 ------------~~L-~~~L~PLL~ky~VdlYisGHDH~lq~i~--~~gt~yIvSGaGs~~~~~~~~~~~~s~F~~~~~G 298 (394)
T PTZ00422 234 ------------SYL-SYYLLPLLKDAQVDLYISGYDRNMEVLT--DEGTAHINCGSGGNSGRKSIMKNSKSLFYSEDIG 298 (394)
T ss_pred ------------HHH-HHHHHHHHHHcCcCEEEEccccceEEec--CCCceEEEeCccccccCCCCCCCCCcceecCCCC
Confidence 011 1257899999999999999999998763 3478888888754211 13578
Q ss_pred eEEEEEecCCceee
Q psy2930 278 FLMGYVVENSSGVN 291 (293)
Q Consensus 278 f~~~~~~~~~~~~~ 291 (293)
|..++++.+.+.+.
T Consensus 299 F~~~~l~~~~l~~~ 312 (394)
T PTZ00422 299 FCIHELNAEGMVTK 312 (394)
T ss_pred EEEEEEecCEEEEE
Confidence 99999999988765
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=152.52 Aligned_cols=187 Identities=19% Similarity=0.184 Sum_probs=112.2
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceE
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTEL 94 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (293)
|+++||+|.+.. . +.. ..+++.+||+||++||+++.+.. ..+.. ++.+. ..++|+
T Consensus 1 i~~~sD~H~~~~-------~------~~~---~~~~~~~~D~vv~~GDl~~~~~~---~~~~~-~~~l~-----~~~~p~ 55 (188)
T cd07392 1 ILAISDIHGDVE-------K------LEA---IILKAEEADAVIVAGDITNFGGK---EAAVE-INLLL-----AIGVPV 55 (188)
T ss_pred CEEEEecCCCHH-------H------HHH---HHhhccCCCEEEECCCccCcCCH---HHHHH-HHHHH-----hcCCCE
Confidence 589999998321 1 111 33456799999999999997652 12222 12222 356899
Q ss_pred EEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCC
Q psy2930 95 HVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE 174 (293)
Q Consensus 95 ~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ 174 (293)
++++||||... ....+...........+.++++.|+++++.... .........+++++|+ +.+...
T Consensus 56 ~~v~GNHD~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~l~~~-~~l~~~----- 121 (188)
T cd07392 56 LAVPGNCDTPE-------ILGLLTSAGLNLHGKVVEVGGYTFVGIGGSNPT-PFNTPIELSEEEIVSD-GRLNNL----- 121 (188)
T ss_pred EEEcCCCCCHH-------HHHhhhcCcEecCCCEEEECCEEEEEeCCCCCC-CCCCccccCHHHHHHh-hhhhcc-----
Confidence 99999999731 011111111111235677899999999764311 1112234456788887 333321
Q ss_pred CCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee
Q psy2930 175 CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY 254 (293)
Q Consensus 175 ~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~ 254 (293)
+..+.|+++|+||.......... ....+...+.+++++++++++||||+|......
T Consensus 122 --------~~~~~ilv~H~pp~~~~~d~~~~----------------~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~ 177 (188)
T cd07392 122 --------LAKNLILVTHAPPYGTAVDRVSG----------------GFHVGSKAIRKFIEERQPLLCICGHIHESRGVD 177 (188)
T ss_pred --------CCCCeEEEECCCCcCCcccccCC----------------CCccCCHHHHHHHHHhCCcEEEEecccccccee
Confidence 56789999999996531110000 001234578889999999999999999996432
Q ss_pred ccCCCeeEEec
Q psy2930 255 HAYGKVHEYTV 265 (293)
Q Consensus 255 ~~~~~~~~~~~ 265 (293)
..++..++++
T Consensus 178 -~~~~~~~~n~ 187 (188)
T cd07392 178 -KIGNTLVVNP 187 (188)
T ss_pred -eeCCeEEecC
Confidence 2345655554
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-19 Score=148.41 Aligned_cols=200 Identities=13% Similarity=0.137 Sum_probs=122.6
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
..+||+++||+|- +. ...+++.+.+++.++|+||++||+++.+. ..+++..+.+.+. ..
T Consensus 3 ~~~kIl~iSDiHg-----n~---------~~le~l~~~~~~~~~D~vv~~GDl~~~g~--~~~~~~~~l~~l~-----~l 61 (224)
T cd07388 3 TVRYVLATSNPKG-----DL---------EALEKLVGLAPETGADAIVLIGNLLPKAA--KSEDYAAFFRILG-----EA 61 (224)
T ss_pred ceeEEEEEEecCC-----CH---------HHHHHHHHHHhhcCCCEEEECCCCCCCCC--CHHHHHHHHHHHH-----hc
Confidence 4689999999996 10 12233444555679999999999999763 1333444444443 24
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHHHhC------C---CCcceEEe-CCEEEEEEeceeccCCCCCCCchhHHHH-
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSRAFN------S---SMVKLLSI-KGSYFVLINSMALEGDGCFLCKPAQDRI- 159 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~-~~~~~i~lds~~~~~~~~~~~~~~~~~l- 159 (293)
+.|+++|+||||... ...+++.++ . .-.....+ ++++|+++++.... ..+.+++++
T Consensus 62 ~~pv~~V~GNhD~~v--------~~~l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~-----~~e~sE~e~~ 128 (224)
T cd07388 62 HLPTFYVPGPQDAPL--------WEYLREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIAD-----EGEPEEHEAL 128 (224)
T ss_pred CCceEEEcCCCChHH--------HHHHHHHhcccccCccceecCCCeEEecCCeEEEEecCCcCC-----CCCcCHHHHh
Confidence 579999999999621 122333332 1 01134455 55899999654321 122344432
Q ss_pred ---HHHHH----HhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHH
Q psy2930 160 ---SLISA----KLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDM 232 (293)
Q Consensus 160 ---~~l~~----~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 232 (293)
.|+.+ .+... ...+.|+++|+||+..... ......+.+
T Consensus 129 ~~~~~~~~~~l~~~~~~-------------~~~~~VLv~H~PP~g~g~~----------------------h~GS~alr~ 173 (224)
T cd07388 129 RYPAWVAEYRLKALWEL-------------KDYRKVFLFHTPPYHKGLN----------------------EQGSHEVAH 173 (224)
T ss_pred hhhhhHHHHHHHHHHhC-------------CCCCeEEEECCCCCCCCCC----------------------ccCHHHHHH
Confidence 44332 33221 3568899999999765321 223457889
Q ss_pred HHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCC
Q psy2930 233 LLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287 (293)
Q Consensus 233 ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~ 287 (293)
++++++|++++|||+|.... ..|++..++.++++. ..|.++++.+..
T Consensus 174 ~I~~~~P~l~i~GHih~~~~---~~g~t~vvNpg~~~~-----g~~a~i~~~~~~ 220 (224)
T cd07388 174 LIKTHNPLVVLVGGKGQKHE---LLGASWVVVPGDLSE-----GRYALLDLRARK 220 (224)
T ss_pred HHHHhCCCEEEEcCCceeEE---EeCCEEEECCCcccC-----CcEEEEEecCcc
Confidence 99999999999999993332 245666666655432 257888887543
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-20 Score=152.33 Aligned_cols=175 Identities=17% Similarity=0.102 Sum_probs=106.0
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+|||+++||+|++......+. ........+.+.++++..+||+||++||+++...... +.+ ..++.+.+.+. ..+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~-~~~-~~~~~~~~~l~-~~~ 76 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEG--CEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND-NST-SALDKAVSPMI-DRK 76 (199)
T ss_pred ceEEEEEeeecccCCCCCCCc--chhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch-HHH-HHHHHHHHHHH-HcC
Confidence 589999999999876432110 0112234456777778889999999999999665321 112 22333333332 357
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhccc
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~ 171 (293)
+|+++++|||| ..+.....|++||++.+.....
T Consensus 77 ~p~~~~~GNHD-----------------------------------------------~~g~l~~~ql~wL~~~l~~~~~ 109 (199)
T cd07383 77 IPWAATFGNHD-----------------------------------------------GYDWIRPSQIEWFKETSAALKK 109 (199)
T ss_pred CCEEEECccCC-----------------------------------------------CCCCCCHHHHHHHHHHHHHHhh
Confidence 89999999999 1122457889999999887531
Q ss_pred CCCCCccccCCCCCCCEEeeccCCCcCCCCCC--CCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCC
Q psy2930 172 DRECPKSMKLGSYSQPIILQHFPLYRESDEEC--SGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHN 249 (293)
Q Consensus 172 ~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~ 249 (293)
..+...+.++++|+|+........ ....... .+.. .....+...+..+++..+++++|+||+|.
T Consensus 110 --------~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~-~d~~-----~~~~~~~~~~~~~~~~~~v~~v~~GH~H~ 175 (199)
T cd07383 110 --------KYGKPIPSLAFFHIPLPEYREVWEGKGKVPGIN-NEKV-----CCPKINSGLFKALLERGDVKGVFCGHDHG 175 (199)
T ss_pred --------ccCCCCcceEEEecChHHHHhhhcccCCCCccC-Cccc-----CCCcCCcHHHHHHHHcCCeEEEEeCCCCC
Confidence 001457899999999865322110 0000000 0000 00112233556666777899999999999
Q ss_pred Cce
Q psy2930 250 GCH 252 (293)
Q Consensus 250 ~~~ 252 (293)
+..
T Consensus 176 ~~~ 178 (199)
T cd07383 176 NDF 178 (199)
T ss_pred cce
Confidence 754
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-19 Score=158.10 Aligned_cols=130 Identities=15% Similarity=0.048 Sum_probs=90.7
Q ss_pred cceEE-eCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCC
Q psy2930 126 VKLLS-IKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECS 204 (293)
Q Consensus 126 ~~~~~-~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~ 204 (293)
||.|. .++++||+|||+...+ ...+.+.++|++||+++|+.. ++.++||++|||++......
T Consensus 293 YYSFd~~ggvrfIvLDSt~~~G--~~~G~L~eeQL~WLeqeLa~a-------------~~k~VVVf~HHPp~s~g~~~-- 355 (496)
T TIGR03767 293 YYTFDIAGGVRGISMDTTNRAG--GDEGSLGQTQFKWIKDTLRAS-------------SDTLFVLFSHHTSWSMVNEL-- 355 (496)
T ss_pred eEEEEeECCEEEEEEeCCCcCC--CcCCccCHHHHHHHHHHHhcC-------------CCCCEEEEECCCCccccccc--
Confidence 78888 8999999999986433 234567899999999999864 56789999999997643211
Q ss_pred CCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEecCCCCCceeecc-------CCCeeEEeccceeccCCCCC
Q psy2930 205 GPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVIDGHTHNGCHKYHA-------YGKVHEYTVPSFSWRNKNNP 276 (293)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~GH~H~~~~~~~~-------~~~~~~~~~~s~~~~~~~~p 276 (293)
++... .+....+.+.+.++|+++ ++.++|+||+|......+. ..++.+|+++|.. .-+.
T Consensus 356 -~Dp~~---------pg~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlv--dfPq- 422 (496)
T TIGR03767 356 -TDPVD---------PGEKRHLGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHI--DFPQ- 422 (496)
T ss_pred -ccccc---------ccccccCHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccc--cCCC-
Confidence 11000 001133445788899998 7999999999999854321 1278888887743 2222
Q ss_pred ceEEEEEec
Q psy2930 277 SFLMGYVVE 285 (293)
Q Consensus 277 ~f~~~~~~~ 285 (293)
-|++++|..
T Consensus 423 ~~Ri~Ei~~ 431 (496)
T TIGR03767 423 QGRIIELAD 431 (496)
T ss_pred CceEEEEEe
Confidence 488888874
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-18 Score=152.82 Aligned_cols=188 Identities=21% Similarity=0.284 Sum_probs=117.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||++|||+|++..... ...+..++.+.++..+||+||++|||++.+. +.++....+.+. .. ....
T Consensus 1 ~~i~~isD~H~~~~~~~--------~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~---~~~~~~~~~~l~-~~--~~~~ 66 (301)
T COG1409 1 MRIAHISDLHLGALGVD--------SEELLEALLAAIEQLKPDLLVVTGDLTNDGE---PEEYRRLKELLA-RL--ELPA 66 (301)
T ss_pred CeEEEEecCcccccccc--------hHHHHHHHHHHHhcCCCCEEEEccCcCCCCC---HHHHHHHHHHHh-hc--cCCC
Confidence 68999999999751111 1124455667777889999999999999864 344444333333 11 3577
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEE--e-CCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhc
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLS--I-KGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~ 169 (293)
|++++|||||.... ....|...+.....+... . ++++++++|+.... ...+.....|++|+++.|+..
T Consensus 67 ~~~~vpGNHD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~G~~~~~q~~~l~~~l~~~ 137 (301)
T COG1409 67 PVIVVPGNHDARVV------NGEAFSDQFFNRYAVLVGACSSGGWRVIGLDSSVPG---VPLGRLGAEQLDWLEEALAAA 137 (301)
T ss_pred ceEeeCCCCcCCch------HHHHhhhhhcccCcceEeeccCCceEEEEecCCCCC---CCCCEECHHHHHHHHHHHHhC
Confidence 89999999998531 123344444333111111 2 67899999998754 233457889999999999875
Q ss_pred ccCCCCCccccCCCC-CCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcC--ccEEEecC
Q psy2930 170 RKDRECPKSMKLGSY-SQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLN--PRLVIDGH 246 (293)
Q Consensus 170 ~~~~~~~~~~~~~~~-~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~--~~lvl~GH 246 (293)
.. .. ...|+++|+|+...... .+ .....+......++...+ ++++|+||
T Consensus 138 ~~-----------~~~~~~v~~~hh~~~~~~~~----~~-------------~~~l~~~~~~~~~~~~~~~~v~~vl~GH 189 (301)
T COG1409 138 PE-----------RAKDTVVVLHHHPLPSPGTG----VD-------------RVALRDAGELLDVLIAHGNDVRLVLSGH 189 (301)
T ss_pred cc-----------ccCceEEEecCCCCCCCCCc----cc-------------eeeeecchhHHHHHHhcCCceEEEEeCc
Confidence 31 10 13355566665432211 00 012233345566777777 99999999
Q ss_pred CCCCc
Q psy2930 247 THNGC 251 (293)
Q Consensus 247 ~H~~~ 251 (293)
.|...
T Consensus 190 ~H~~~ 194 (301)
T COG1409 190 IHLAA 194 (301)
T ss_pred ccccc
Confidence 99993
|
|
| >KOG1432|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-18 Score=148.20 Aligned_cols=260 Identities=13% Similarity=0.027 Sum_probs=152.0
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHH-----H-HhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHH
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDK-----L-RREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRR 81 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~ 81 (293)
..+++|||+++||+|++......+.+. . +.+....+.+.++++.++||+|+++||++.+-. ..+......++
T Consensus 49 ~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~--t~Da~~sl~kA 126 (379)
T KOG1432|consen 49 REDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS--TQDAATSLMKA 126 (379)
T ss_pred cCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc--cHhHHHHHHHH
Confidence 677889999999999998743332221 1 234556778888999999999999999999632 34556666777
Q ss_pred HHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC--------------------CcceEEeC---------
Q psy2930 82 FYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS--------------------MVKLLSIK--------- 132 (293)
Q Consensus 82 ~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~--------- 132 (293)
+.... +.+||+.++.||||-.-. .. +..+.++.... .++...+.
T Consensus 127 vaP~I--~~~IPwA~~lGNHDdes~--lt---r~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~ 199 (379)
T KOG1432|consen 127 VAPAI--DRKIPWAAVLGNHDDESD--LT---RLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELEN 199 (379)
T ss_pred hhhHh--hcCCCeEEEecccccccc--cC---HHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccCCCccccc
Confidence 77777 689999999999997421 11 22222222211 01111111
Q ss_pred --CEEEEEEeceeccCCC---CCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCC-CCC
Q psy2930 133 --GSYFVLINSMALEGDG---CFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEEC-SGP 206 (293)
Q Consensus 133 --~~~~i~lds~~~~~~~---~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~ 206 (293)
-..+++||+..++... ..+..+...|.+|++..-..-+. ....+ ...|-+++.|+|+........ .++
T Consensus 200 ~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~-----~~~~~-~P~p~La~~HIP~~E~~~~~~~tp~ 273 (379)
T KOG1432|consen 200 KSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKE-----PNSKY-NPQPGLAFFHIPLPEFLELESKTPL 273 (379)
T ss_pred CceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhc-----ccCcc-CCCCceEEEEcccHHHhhccCCCcc
Confidence 2567777777666443 23345677899999876533110 00111 222789999999954332110 000
Q ss_pred CCchhhhhccccccc--ccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceec-cCC--C-CCceEE
Q psy2930 207 DSAPDIEKRKKFRQR--WECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSW-RNK--N-NPSFLM 280 (293)
Q Consensus 207 ~~~~~~~~~~~~~~~--~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~-~~~--~-~p~f~~ 280 (293)
. ..++|+ ....+...+..+.++.+++.||+||.|.+......-+.+...-.+.+.+ ..| + .++-+|
T Consensus 274 ~--------g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv 345 (379)
T KOG1432|consen 274 I--------GVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARV 345 (379)
T ss_pred c--------ceeeccccccccccHHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEE
Confidence 0 012222 1223344666666688999999999999976542221222222222222 112 2 457788
Q ss_pred EEEecCCcee
Q psy2930 281 GYVVENSSGV 290 (293)
Q Consensus 281 ~~~~~~~~~~ 290 (293)
++++...-.|
T Consensus 346 ~e~d~~~~~I 355 (379)
T KOG1432|consen 346 FELDLNKDRI 355 (379)
T ss_pred EEcccccccc
Confidence 8888654333
|
|
| >KOG1378|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-18 Score=150.45 Aligned_cols=195 Identities=17% Similarity=0.232 Sum_probs=130.8
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHH-HhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAV-ALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 86 (293)
.++.+.++++++|+=...... . ..... ...++|+||+.|||.......+ ..|.++.+.++.+
T Consensus 143 ~~~~~~~~~i~GDlG~~~~~~-s--------------~~~~~~~~~k~d~vlhiGDlsYa~~~~n-~~wD~f~r~vEp~- 205 (452)
T KOG1378|consen 143 GQDSPTRAAIFGDMGCTEPYT-S--------------TLRNQEENLKPDAVLHIGDLSYAMGYSN-WQWDEFGRQVEPI- 205 (452)
T ss_pred CccCceeEEEEcccccccccc-c--------------hHhHHhcccCCcEEEEecchhhcCCCCc-cchHHHHhhhhhh-
Confidence 355779999999994422221 1 11111 1237999999999998644222 3455544444444
Q ss_pred cCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC---------CcceEEeCCEEEEEEeceeccCCCCCCCchhHH
Q psy2930 87 STPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS---------MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQD 157 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~ 157 (293)
...+|+.++.||||+.+.... .+..|...|..+ .+|.+..++++||+|+|-.+.+ ......
T Consensus 206 --As~vPymv~~GNHE~d~~~~~---~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~-----~~~~~~ 275 (452)
T KOG1378|consen 206 --ASYVPYMVCSGNHEIDWPPQP---CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYN-----FLKGTA 275 (452)
T ss_pred --hccCceEEecccccccCCCcc---cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEecccccc-----ccccch
Confidence 368899999999999764221 122233333322 3789999999999998877651 135578
Q ss_pred HHHHHHHHhhhcccCCCCCccccCCC-CCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhh
Q psy2930 158 RISLISAKLKCCRKDRECPKSMKLGS-YSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDY 236 (293)
Q Consensus 158 ~l~~l~~~l~~~~~~~~~~~~~~~~~-~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 236 (293)
|.+||++.|+.... + ..++|++.|.|++...... -++|+.....+..+++++-+
T Consensus 276 QY~WL~~dL~~v~r-----------~~tPWlIv~~HrP~Y~S~~~~--------------~~reG~~~~~~~~LE~l~~~ 330 (452)
T KOG1378|consen 276 QYQWLERDLASVDR-----------KKTPWLIVQGHRPMYCSSNDA--------------HYREGEFESMREGLEPLFVK 330 (452)
T ss_pred HHHHHHHHHHHhcc-----------cCCCeEEEEecccceecCCch--------------hhccCcchhhHHHHHHHHHH
Confidence 99999999998643 2 4678999999998776521 11222222233578999999
Q ss_pred cCccEEEecCCCCCceee
Q psy2930 237 LNPRLVIDGHTHNGCHKY 254 (293)
Q Consensus 237 ~~~~lvl~GH~H~~~~~~ 254 (293)
++|+++|.||.|++.+..
T Consensus 331 ~~VDvvf~GHvH~YER~~ 348 (452)
T KOG1378|consen 331 YKVDVVFWGHVHRYERFC 348 (452)
T ss_pred hceeEEEeccceehhccc
Confidence 999999999999998743
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.5e-17 Score=130.83 Aligned_cols=215 Identities=17% Similarity=0.178 Sum_probs=133.4
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccC--CCCccCChhhHHHHHHHHHhhhcC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLL--DEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~--~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
.+||++.+||+|.... ....+..+....++|+++++|||+ +.+... ...+.. .++.+.
T Consensus 2 ~~mkil~vtDlHg~~~--------------~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~---~~~~~~-~~e~l~-- 61 (226)
T COG2129 2 KKMKILAVTDLHGSED--------------SLKKLLNAAADIRADLLVIAGDLTYFHFGPKE---VAEELN-KLEALK-- 61 (226)
T ss_pred CcceEEEEeccccchH--------------HHHHHHHHHhhccCCEEEEecceehhhcCchH---HHHhhh-HHHHHH--
Confidence 4799999999999322 122344455567999999999999 655421 111110 133333
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC-CcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHH-HHHHHh
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRIS-LISAKL 166 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~-~l~~~l 166 (293)
..++|++++|||-|-. .......+ .+.. ...+..++++.|+++.... ..+...+.+..++++. .+++.+
T Consensus 62 ~~~~~v~avpGNcD~~-------~v~~~l~~-~~~~v~~~v~~i~~~~~~G~Ggsn-~tp~nt~~e~~E~~I~s~l~~~v 132 (226)
T COG2129 62 ELGIPVLAVPGNCDPP-------EVIDVLKN-AGVNVHGRVVEIGGYGFVGFGGSN-PTPFNTPREFSEDEIYSKLKSLV 132 (226)
T ss_pred hcCCeEEEEcCCCChH-------HHHHHHHh-cccccccceEEecCcEEEEecccC-CCCCCCccccCHHHHHHHHHHHH
Confidence 3689999999998862 11222222 3332 2488999999999974333 2222233444444443 333333
Q ss_pred hhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecC
Q psy2930 167 KCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGH 246 (293)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH 246 (293)
+... +...|+++|.||+.+..+. + + +|.++.....++++++++|.+++|||
T Consensus 133 ~~~~-------------~~~~Il~~HaPP~gt~~d~--~--------~------g~~hvGS~~vr~~ieefqP~l~i~GH 183 (226)
T COG2129 133 KKAD-------------NPVNILLTHAPPYGTLLDT--P--------S------GYVHVGSKAVRKLIEEFQPLLGLHGH 183 (226)
T ss_pred hccc-------------CcceEEEecCCCCCccccC--C--------C------CccccchHHHHHHHHHhCCceEEEee
Confidence 3321 1112999999998876531 1 0 14567777899999999999999999
Q ss_pred CCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCce
Q psy2930 247 THNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSG 289 (293)
Q Consensus 247 ~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~ 289 (293)
+|+.+-. ...|++-.++-++++ ...|+++++..+-+.
T Consensus 184 IHEs~G~-d~iG~TivVNPG~~~-----~g~yA~i~l~~~~Vk 220 (226)
T COG2129 184 IHESRGI-DKIGNTIVVNPGPLG-----EGRYALIELEKEVVK 220 (226)
T ss_pred ecccccc-cccCCeEEECCCCcc-----CceEEEEEecCcEEE
Confidence 9986543 344455555544422 357999999887443
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=132.48 Aligned_cols=142 Identities=22% Similarity=0.305 Sum_probs=93.3
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceE
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTEL 94 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (293)
|+++||+|++........... .....+.+.+++.+||+|+++||+++.+.. .++....+.+.++. ...+|+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~----~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~---~~~~~~~~~~~~l~--~~~~~~ 71 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALL----SLLDRLLAEIKALDPDLVVITGDLTQRGLP---EEFEEAREFLDALP--APLEPV 71 (144)
T ss_pred CeEeCccCCCCCcchhHHHHH----HHHHHHHHHHhccCCCEEEECCCCCCCCCH---HHHHHHHHHHHHcc--ccCCcE
Confidence 689999999876443211110 113345666677899999999999997652 34444333333332 122599
Q ss_pred EEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCC
Q psy2930 95 HVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE 174 (293)
Q Consensus 95 ~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ 174 (293)
++++||||.
T Consensus 72 ~~v~GNHD~----------------------------------------------------------------------- 80 (144)
T cd07400 72 LVVPGNHDV----------------------------------------------------------------------- 80 (144)
T ss_pred EEeCCCCeE-----------------------------------------------------------------------
Confidence 999999996
Q ss_pred CCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee
Q psy2930 175 CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY 254 (293)
Q Consensus 175 ~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~ 254 (293)
|+++|+|+........ . ...+...+.+++++++++++++||+|......
T Consensus 81 -------------iv~~Hhp~~~~~~~~~---~---------------~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 81 -------------IVVLHHPLVPPPGSGR---E---------------RLLDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred -------------EEEecCCCCCCCcccc---c---------------cCCCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 6899999976543210 0 01145578889999999999999999998653
Q ss_pred c--cCCCeeEEeccc
Q psy2930 255 H--AYGKVHEYTVPS 267 (293)
Q Consensus 255 ~--~~~~~~~~~~~s 267 (293)
. ..+++..++++|
T Consensus 130 ~~~~~~~~~~~~aGs 144 (144)
T cd07400 130 ISNAGGGLVVIGAGT 144 (144)
T ss_pred ccCCCCCEEEEecCC
Confidence 1 123566666553
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=138.80 Aligned_cols=90 Identities=22% Similarity=0.439 Sum_probs=70.6
Q ss_pred EEEecCCcCCCCCC-chh--HHH---HhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 16 IFIADTHLLGPFRG-HWF--DKL---RREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 16 ~~iSD~H~~~~~~~-~~~--~~~---~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
+.++|+|+-..... .+. .++ ..+.++.+.+..++...+||.|+++|||++++ +.++++|...+++|.+++...
T Consensus 1 l~vADPQi~d~~~~~~~~~~~rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~-w~~D~ef~~~~~RF~~if~~~ 79 (193)
T cd08164 1 LALGDPQIEGDHKIENYGFKGRLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQ-WIDDEEFAKRADRYRRRFFGR 79 (193)
T ss_pred CcccCccccCCCCCCCCcccceehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCC-cccHHHHHHHHHHHHHHhcCC
Confidence 36889999765521 121 233 36788999999999999999999999999874 678899999999999987322
Q ss_pred -----------------CCceEEEecCCCCCCCC
Q psy2930 90 -----------------DGTELHVVPGNHDMGFH 106 (293)
Q Consensus 90 -----------------~~~~~~~v~GNHD~~~~ 106 (293)
.+++++.|+||||+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~~ 113 (193)
T cd08164 80 NDWQVGNISLAARTFEDGKTPLINIAGNHDVGYG 113 (193)
T ss_pred cccccccccccccccccCCceEEEECCcccCCCC
Confidence 14899999999999764
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-19 Score=143.96 Aligned_cols=192 Identities=20% Similarity=0.252 Sum_probs=97.3
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++||+|++..... . ..+.+.......++|+||++||+++.+.... ............. ..++
T Consensus 1 ~ri~~isD~H~~~~~~~---------~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~--~~~~~~~~~~~~~--~~~~ 66 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDS---------D-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSE--EWRAQFWFFIRLL--NPKI 66 (200)
T ss_dssp EEEEEEEBBTTTHHHHC---------H-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHH--HHHHHHHHHHHHH--HTTT
T ss_pred CeEEEEcCCCCCCcchh---------H-HHHHHHHHhccCCCCEEEeeccccccccccc--cchhhhccchhhh--hccc
Confidence 79999999999543221 1 2234555566789999999999999876322 1111110111222 3678
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCC---CcceEE-eCCEEEEEEeceeccCCCC----CCCchhHHHHHHHHH
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS---MVKLLS-IKGSYFVLINSMALEGDGC----FLCKPAQDRISLISA 164 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~i~lds~~~~~~~~----~~~~~~~~~l~~l~~ 164 (293)
|+++++||||..... ............. ...... .+................. ........+..|+..
T Consensus 67 ~~~~~~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (200)
T PF00149_consen 67 PVYFILGNHDYYSGN----SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLL 142 (200)
T ss_dssp TEEEEE-TTSSHHHH----HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHH
T ss_pred cccccccccccceec----cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccc
Confidence 999999999985310 0001111111110 011110 0111111111111010000 011122333334333
Q ss_pred HhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEe
Q psy2930 165 KLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVID 244 (293)
Q Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~ 244 (293)
.+... ...++|+++|+|+.......... .........+..+++..+++++|+
T Consensus 143 ~~~~~-------------~~~~~iv~~H~p~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~v~~~~~ 194 (200)
T PF00149_consen 143 LLEAK-------------NDDPVIVFTHHPPYSSSSDSSSY---------------GNESKGREALEELLKKYNVDLVLS 194 (200)
T ss_dssp HHHEE-------------EESEEEEEESSSSSTTSSSTHHH---------------SSEEEHHHHHHHHHHHTTCSEEEE
T ss_pred ccccc-------------cccceeEEEecCCCCcccccccc---------------chhhccHHHHHHHHhhCCCCEEEe
Confidence 33322 46789999999997654321000 001122456788999999999999
Q ss_pred cCCCCC
Q psy2930 245 GHTHNG 250 (293)
Q Consensus 245 GH~H~~ 250 (293)
||+|.+
T Consensus 195 GH~H~~ 200 (200)
T PF00149_consen 195 GHTHRY 200 (200)
T ss_dssp ESSSSE
T ss_pred CceecC
Confidence 999974
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=139.44 Aligned_cols=89 Identities=19% Similarity=0.354 Sum_probs=59.5
Q ss_pred EEEEEecCCcCCCCCCchh-HHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 14 KAIFIADTHLLGPFRGHWF-DKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
||+++||+|++........ .+........+.+.+.+.+.+||+|+++||+++.... ....+....+.+.++. ..++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 77 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP-SPEALELLIEALRRLK--EAGI 77 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC-CHHHHHHHHHHHHHHH--HCCC
Confidence 6999999999875432110 1122223345556666677899999999999996542 3344555555555543 2478
Q ss_pred eEEEecCCCCCCC
Q psy2930 93 ELHVVPGNHDMGF 105 (293)
Q Consensus 93 ~~~~v~GNHD~~~ 105 (293)
|+++++||||...
T Consensus 78 ~v~~~~GNHD~~~ 90 (223)
T cd00840 78 PVFIIAGNHDSPS 90 (223)
T ss_pred CEEEecCCCCCcc
Confidence 9999999999864
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.7e-18 Score=134.99 Aligned_cols=163 Identities=13% Similarity=0.027 Sum_probs=93.7
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceE
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTEL 94 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (293)
|+++||+|++......++ .+.+...++|+|+++||+++.+.. ..+.. +.... ..+.|+
T Consensus 1 ~~~iSDlH~~~~~~~~~~-------------~~~~~~~~~d~li~~GDi~~~~~~---~~~~~----~~~~~--~~~~~v 58 (166)
T cd07404 1 IQYLSDLHLEFEDNLADL-------------LNFPIAPDADILVLAGDIGYLTDA---PRFAP----LLLAL--KGFEPV 58 (166)
T ss_pred CceEccccccCccccccc-------------cccCCCCCCCEEEECCCCCCCcch---HHHHH----HHHhh--cCCccE
Confidence 578999999654322211 022345699999999999996542 11111 22222 356799
Q ss_pred EEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCC
Q psy2930 95 HVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRE 174 (293)
Q Consensus 95 ~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ 174 (293)
++++||||.+ ++|++. +....+.....+.++|..+.
T Consensus 59 ~~v~GNHD~~-----------------------------~~~~G~------~~w~~~~~~~~~~~~~~~~d--------- 94 (166)
T cd07404 59 IYVPGNHEFY-----------------------------VRIIGT------TLWSDISLFGEAAARMRMND--------- 94 (166)
T ss_pred EEeCCCcceE-----------------------------EEEEee------ecccccCccchHHHHhCCCC---------
Confidence 9999999984 444443 11112211222333322222
Q ss_pred CCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee
Q psy2930 175 CPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY 254 (293)
Q Consensus 175 ~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~ 254 (293)
-.+++||++||||....... ++.....+ ....+.+.+++++.+++++++||+|......
T Consensus 95 --------~~~~~vv~~HhpP~~~~~~~---~~~~~~~~----------~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~ 153 (166)
T cd07404 95 --------FRGKTVVVTHHAPSPLSLAP---QYGDSLVN----------AAFAVDLDDLILADPIDLWIHGHTHFNFDYR 153 (166)
T ss_pred --------CCCCEEEEeCCCCCccccCc---cccCCCcc----------hhhhhccHhHHhhcCCCEEEECCccccceEE
Confidence 23689999999997654321 11110000 0011235567777899999999999997653
Q ss_pred ccCCCeeEEecc
Q psy2930 255 HAYGKVHEYTVP 266 (293)
Q Consensus 255 ~~~~~~~~~~~~ 266 (293)
.+++..++.|
T Consensus 154 --~~g~~~~~np 163 (166)
T cd07404 154 --IGGTRVLSNQ 163 (166)
T ss_pred --ECCEEEEecC
Confidence 3477777654
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-16 Score=139.19 Aligned_cols=146 Identities=12% Similarity=0.005 Sum_probs=88.4
Q ss_pred cceEE-eCCE--EEEEEeceeccCC----CCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcC
Q psy2930 126 VKLLS-IKGS--YFVLINSMALEGD----GCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRE 198 (293)
Q Consensus 126 ~~~~~-~~~~--~~i~lds~~~~~~----~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~ 198 (293)
+|.+. .+++ ++|+||+..+.+. +...+.+.++||+||++.|+.+. ...+.+|++|||+...
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~------------a~~p~VVV~hHpPi~t 361 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ------------ADGQLMIIAAHIPIAV 361 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc------------CCCceEEEEeCCCccc
Confidence 56777 4656 9999999987654 44566788999999999999763 2456666655555432
Q ss_pred -CCCCCCCCCCchh--hhhcccccccccccCHHHHHHHHhhc-CccEEEecCCCCCceeec--c-----CCCeeEEeccc
Q psy2930 199 -SDEECSGPDSAPD--IEKRKKFRQRWECISKESTDMLLDYL-NPRLVIDGHTHNGCHKYH--A-----YGKVHEYTVPS 267 (293)
Q Consensus 199 -~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~GH~H~~~~~~~--~-----~~~~~~~~~~s 267 (293)
... .++.+.. ......++ +..+...+.++|.++ ++.++||||.|......+ + ..+..++.+.|
T Consensus 362 ~gi~---~md~w~~~~~~~~~~L~---n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v~a~~~p~~~~pe~gFWeveTaS 435 (492)
T TIGR03768 362 SPIG---SEMEWWLGAADANPDLQ---NAVSLTGLVTTLQKYPNLLMWIAGHRHLNTVKAFPSPDPARPEYGFWQVETAS 435 (492)
T ss_pred CCcc---chhhhcccccccccccc---ccccHHHHHHHHhcCCCeEEEEcCCcccccccccCCCCCCCCcCceEEEeehh
Confidence 211 1111110 00000011 122223678899988 688999999998876532 2 23677777765
Q ss_pred eeccCCCCCceEEEEEec-CCceeee
Q psy2930 268 FSWRNKNNPSFLMGYVVE-NSSGVNL 292 (293)
Q Consensus 268 ~~~~~~~~p~f~~~~~~~-~~~~~~~ 292 (293)
.. .- +.-|++++|.. ...+|+|
T Consensus 436 l~--Df-PQq~R~~Ei~~n~d~tvsi 458 (492)
T TIGR03768 436 LR--DF-PQQFRTFEIYLNSDDTVSI 458 (492)
T ss_pred hc--cc-hhhceEEEEEeCCCCeEEE
Confidence 43 21 12588888873 4455544
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=141.54 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=53.5
Q ss_pred CCCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh
Q psy2930 7 PESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 7 ~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 86 (293)
++..+++||+++||+|++...... ..+.+.+.+++.+||+|+++||+++.+.... +....+.+.++.
T Consensus 44 ~~~~~~~rI~~lSDlH~~~~~~~~----------~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~---~~~~~~~L~~L~ 110 (271)
T PRK11340 44 KDNAAPFKILFLADLHYSRFVPLS----------LISDAIALGIEQKPDLILLGGDYVLFDMPLN---FSAFSDVLSPLA 110 (271)
T ss_pred CCCCCCcEEEEEcccCCCCcCCHH----------HHHHHHHHHHhcCCCEEEEccCcCCCCcccc---HHHHHHHHHHHh
Confidence 344567999999999995432111 1223455667789999999999998433222 223333333332
Q ss_pred cCCCCceEEEecCCCCCCC
Q psy2930 87 STPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~ 105 (293)
...|+++|+||||++.
T Consensus 111 ---~~~pv~~V~GNHD~~~ 126 (271)
T PRK11340 111 ---ECAPTFACFGNHDRPV 126 (271)
T ss_pred ---hcCCEEEecCCCCccc
Confidence 2368999999999853
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.7e-16 Score=136.90 Aligned_cols=89 Identities=28% Similarity=0.487 Sum_probs=57.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHH-HHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRR-FYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 91 (293)
|||+|+||+|+|....+.++... -..+.+.+.+.+.+.+||+||++||+++........... .... +.+.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~--~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~-~~~~~l~~~L~-~~g 76 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNY--QLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMN-FVREKIFDLLK-EAG 76 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHH--HHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHH-HHHHHHHHHHH-HCC
Confidence 79999999999865433332211 113444556666778999999999999975433322222 2222 233332 358
Q ss_pred ceEEEecCCCCCCC
Q psy2930 92 TELHVVPGNHDMGF 105 (293)
Q Consensus 92 ~~~~~v~GNHD~~~ 105 (293)
+|+++++||||...
T Consensus 77 i~v~~I~GNHD~~~ 90 (340)
T PHA02546 77 ITLHVLVGNHDMYY 90 (340)
T ss_pred CeEEEEccCCCccc
Confidence 99999999999854
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=133.09 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=52.2
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+|||+++||+|++...... ..+.+.+.+++.+||+|+++||+++.+.... ....+.+.+ + ..+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~----------~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~----~~~~~~l~~-l--~~~ 63 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRE----------RLERLVEKINALKPDLVVLTGDLVDGSVDVL----ELLLELLKK-L--KAP 63 (223)
T ss_pred CCEEEEEeecCCCccCCHH----------HHHHHHHHHhccCCCEEEEcCcccCCcchhh----HHHHHHHhc-c--CCC
Confidence 4899999999996553211 1233555666789999999999999765321 122222332 2 246
Q ss_pred ceEEEecCCCCCCC
Q psy2930 92 TELHVVPGNHDMGF 105 (293)
Q Consensus 92 ~~~~~v~GNHD~~~ 105 (293)
.|+++++||||...
T Consensus 64 ~~v~~v~GNHD~~~ 77 (223)
T cd07385 64 LGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEECCCccccc
Confidence 79999999999864
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=126.01 Aligned_cols=155 Identities=21% Similarity=0.267 Sum_probs=94.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++||+|++.. .+ +++.+.+ .+||+|+++||+++. .+.++.+++ +
T Consensus 1 Mki~~~sD~H~~~~-------------~~-~~~~~~~--~~~d~vi~~GDi~~~---------~~~~~~~~~-------~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLD-------------AL-EAVLEYI--NEPDFVIILGDIFDP---------EEVLELLRD-------I 48 (156)
T ss_dssp EEEEEEE--TTTHH-------------HH-HHHHHHH--TTESEEEEES-SCSH---------HHHHHHHHH-------H
T ss_pred CEEEEEeCCCCChh-------------HH-HHHHHHh--cCCCEEEECCCchhH---------HHHHHHHhc-------C
Confidence 89999999999221 11 2233333 469999999999981 233344433 2
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccC
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD 172 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~ 172 (293)
|+++|.||||... |.+..... . +.......
T Consensus 49 ~~~~v~GNHD~~~-----------~~~~~~~~--~----------------------------------~~~~~~~~--- 78 (156)
T PF12850_consen 49 PVYVVRGNHDNWA-----------FPNENDEE--Y----------------------------------LLDALRLT--- 78 (156)
T ss_dssp EEEEE--CCHSTH-----------HHSEECTC--S----------------------------------SHSEEEEE---
T ss_pred CEEEEeCCccccc-----------chhhhhcc--c----------------------------------cccceeee---
Confidence 8999999999631 22111111 0 00111100
Q ss_pred CCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 173 RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 173 ~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
.....|+++|.+++.... ......+++...+++++++||+|.+..
T Consensus 79 ----------~~~~~i~~~H~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~GH~H~~~~ 123 (156)
T PF12850_consen 79 ----------IDGFKILLSHGHPYDVQW-------------------------DPAELREILSRENVDLVLHGHTHRPQV 123 (156)
T ss_dssp ----------ETTEEEEEESSTSSSSTT-------------------------THHHHHHHHHHTTSSEEEESSSSSEEE
T ss_pred ----------ecCCeEEEECCCCccccc-------------------------ChhhhhhhhcccCCCEEEcCCcccceE
Confidence 345788999987754221 123455777788999999999999987
Q ss_pred eeccCCCeeEEeccceeccCC-CCCceEEEEEecC
Q psy2930 253 KYHAYGKVHEYTVPSFSWRNK-NNPSFLMGYVVEN 286 (293)
Q Consensus 253 ~~~~~~~~~~~~~~s~~~~~~-~~p~f~~~~~~~~ 286 (293)
.. .+++..++.+|++.... ..++|.+++++.+
T Consensus 124 ~~--~~~~~~~~~Gs~~~~~~~~~~~~~i~~~~~~ 156 (156)
T PF12850_consen 124 FK--IGGIHVINPGSIGGPRHGDQSGYAILDIEDK 156 (156)
T ss_dssp EE--ETTEEEEEE-GSSS-SSSSSEEEEEEEETTT
T ss_pred EE--ECCEEEEECCcCCCCCCCCCCEEEEEEEecC
Confidence 54 34899999999887664 4789999999764
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >KOG2679|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-16 Score=128.05 Aligned_cols=241 Identities=15% Similarity=0.159 Sum_probs=140.4
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCC-Ccc-CChhhHHHHHHHHHhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDE-GQY-VGGEDFDNYVRRFYSL 85 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~-~~~-~~~~~~~~~~~~~~~~ 85 (293)
++++.++|++|.|+= . .+.|.... .......+.+++..|+||-+||.+.. |.. ..+..+.+.++.+-..
T Consensus 39 ~~dgslsflvvGDwG--r--~g~~nqs~-----va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 39 KSDGSLSFLVVGDWG--R--RGSFNQSQ-----VALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTA 109 (336)
T ss_pred CCCCceEEEEEcccc--c--CCchhHHH-----HHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccC
Confidence 677889999999993 2 22332110 11112334467899999999997764 332 2334454443333221
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCch-hHHHHHHHhCCCCcce-----E--EeCCEEEEEEeceeccCCCCCC------
Q psy2930 86 FSTPDGTELHVVPGNHDMGFHYRLHPY-LNDRFSRAFNSSMVKL-----L--SIKGSYFVLINSMALEGDGCFL------ 151 (293)
Q Consensus 86 ~~~~~~~~~~~v~GNHD~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~--~~~~~~~i~lds~~~~~~~~~~------ 151 (293)
- ....|+|.|.||||+.-..+.+.. ........+-....++ . ..-+..+.++++..++......
T Consensus 110 p--SLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~P 187 (336)
T KOG2679|consen 110 P--SLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLP 187 (336)
T ss_pred c--ccccchhhhccCccccCchhhhhhHHHHhhccceecccHHhhcceeeeeeccccccchhhheecccccccccccCCh
Confidence 1 234599999999998432111111 0111111111111111 1 1223455555555554332111
Q ss_pred -CchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHH
Q psy2930 152 -CKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKEST 230 (293)
Q Consensus 152 -~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 230 (293)
......++.||+..|+++ .++++||+.|||+...+. .+++. .|. ..+
T Consensus 188 R~~~~~~~l~~le~~L~~S-------------~a~wkiVvGHh~i~S~~~--HG~T~----------------eL~-~~L 235 (336)
T KOG2679|consen 188 RVKYLRALLSWLEVALKAS-------------RAKWKIVVGHHPIKSAGH--HGPTK----------------ELE-KQL 235 (336)
T ss_pred HHHHHHHHHHHHHHHHHHh-------------hcceEEEecccceehhhc--cCChH----------------HHH-HHH
Confidence 123467888999999987 678999999999965442 22221 121 257
Q ss_pred HHHHhhcCccEEEecCCCCCceeeccCCCeeEEecccee--ccCC---------------CCCceEEEEEecCCceee
Q psy2930 231 DMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFS--WRNK---------------NNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 231 ~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~--~~~~---------------~~p~f~~~~~~~~~~~~~ 291 (293)
..||++.+++++++||+|.-+....+..++-.++.++.+ |+-+ ...||..+++......|.
T Consensus 236 lPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~is~~e~~vv 313 (336)
T KOG2679|consen 236 LPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEISHSEARVV 313 (336)
T ss_pred HHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEEecceeEEE
Confidence 899999999999999999988765545577777776654 4331 123777777776665553
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.7e-15 Score=124.98 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=113.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH--hcCCCEEEEcCccCCCCcc--CChhhHHHHHHHHHhhhcC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA--LHQPEHIFVLGDLLDEGQY--VGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pd~vi~~GDl~~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (293)
||++++||+|++..... ..+++.+.++ ..+||.|+++||+++.... ..........+.+.++.
T Consensus 1 M~i~~iSDlHl~~~~~~-----------~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~-- 67 (241)
T PRK05340 1 MPTLFISDLHLSPERPA-----------ITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALS-- 67 (241)
T ss_pred CcEEEEeecCCCCCChh-----------HHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHH--
Confidence 78999999999754321 1122333332 3589999999999985321 11122333344445444
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC---CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHH
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS---SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAK 165 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~ 165 (293)
..++|+++++||||.... ..|.+..+. +....+.++|.++++. +|+...... ...+++.+.
T Consensus 68 ~~g~~v~~v~GNHD~~~~--------~~~~~~~g~~~l~~~~~~~~~g~~i~l~-----HGd~~~~~d---~~y~~~r~~ 131 (241)
T PRK05340 68 DSGVPCYFMHGNRDFLLG--------KRFAKAAGMTLLPDPSVIDLYGQRVLLL-----HGDTLCTDD---KAYQRFRRK 131 (241)
T ss_pred HcCCeEEEEeCCCchhhh--------HHHHHhCCCEEeCCcEEEEECCEEEEEE-----CCcccccCC---HHHHHHHHH
Confidence 456899999999997431 233333331 1245677888888887 455432222 222222222
Q ss_pred hhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEec
Q psy2930 166 LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDG 245 (293)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~G 245 (293)
++. ...+.+.|.++......-....... +..+...-...+.....+.+.+++++++++++++|
T Consensus 132 ~r~----------------~~~~~~~~~~p~~~~~~ia~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G 194 (241)
T PRK05340 132 VRN----------------PWLQWLFLALPLSIRLRIAAKMRAK-SKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHG 194 (241)
T ss_pred HhC----------------HHHHHHHHhCCHHHHHHHHHHHHHH-HHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEEC
Confidence 211 1111222222211100000000000 00000000000122234567788889999999999
Q ss_pred CCCCCceeeccCC--CeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 246 HTHNGCHKYHAYG--KVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 246 H~H~~~~~~~~~~--~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
|+|.+.......+ +...++.|+ |.. ...++.+++++.++
T Consensus 195 H~H~~~~~~~~~~~~~~~~~~lgd--w~~----~~~~~~~~~~~~~~ 235 (241)
T PRK05340 195 HTHRPAIHQLQAGGQPATRIVLGD--WHE----QGSVLKVDADGVEL 235 (241)
T ss_pred cccCcceeeccCCCcceEEEEeCC--CCC----CCeEEEEECCceEE
Confidence 9999865432222 235677776 422 24445666666543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-14 Score=115.18 Aligned_cols=211 Identities=18% Similarity=0.245 Sum_probs=114.6
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHH---------------
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFD--------------- 76 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~--------------- 76 (293)
+-+|+.+||+|- +-.+.+.+...+...+||+|+++|||+...- ..++|.
T Consensus 5 ~~kilA~s~~~g--------------~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a--~~~e~~~a~~~~r~p~k~~i~ 68 (255)
T PF14582_consen 5 VRKILAISNFRG--------------DFELLERLVEVIPEKGPDAVVFVGDLLKAEA--RSDEYERAQEEQREPDKSEIN 68 (255)
T ss_dssp --EEEEEE--TT---------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCH--HHHHHHHHHHTT----THHHH
T ss_pred chhheeecCcch--------------HHHHHHHHHhhccccCCCEEEEeccccccch--hhhHHHHHhhhccCcchhhhh
Confidence 458999999987 1124455677777789999999999987432 122333
Q ss_pred -------HHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC----CC-----cceEEeCC-EEEEEE
Q psy2930 77 -------NYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS----SM-----VKLLSIKG-SYFVLI 139 (293)
Q Consensus 77 -------~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~-~~~i~l 139 (293)
+.++.|-..++ ..++|+++||||||... ...|+..+.. +. ...+.++| +.+++.
T Consensus 69 ~e~~~~~e~~~~ff~~L~-~~~~p~~~vPG~~Dap~--------~~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~ 139 (255)
T PF14582_consen 69 EEECYDSEALDKFFRILG-ELGVPVFVVPGNMDAPE--------RFFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGM 139 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH-CC-SEEEEE--TTS-SH--------HHHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE
T ss_pred hhhhhhHHHHHHHHHHHH-hcCCcEEEecCCCCchH--------HHHHHHHhccceeccceeeeeeeecccCCcEEEEec
Confidence 22344444444 57999999999999852 2334444442 21 13355554 888888
Q ss_pred eceeccCCCCCCC---chhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCC-CcCCCCCCCCCCCchhhhhc
Q psy2930 140 NSMALEGDGCFLC---KPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPL-YRESDEECSGPDSAPDIEKR 215 (293)
Q Consensus 140 ds~~~~~~~~~~~---~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~~~~~~~~~~ 215 (293)
.+..........- -+.. ..++..+.++.. +..+.|++.|-|| ...+.
T Consensus 140 GGeI~~~~~~~~~~LrYP~w-eaey~lk~l~el-------------k~~r~IlLfhtpPd~~kg~--------------- 190 (255)
T PF14582_consen 140 GGEITDDQREEEFKLRYPAW-EAEYSLKFLREL-------------KDYRKILLFHTPPDLHKGL--------------- 190 (255)
T ss_dssp -SEEESSS-BCSSS-EEEHH-HHHHHHGGGGGC-------------TSSEEEEEESS-BTBCTCT---------------
T ss_pred CccccCCCccccccccchHH-HHHHHHHHHHhc-------------ccccEEEEEecCCccCCCc---------------
Confidence 6665443321100 0111 222223444433 4557899999999 21110
Q ss_pred ccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCce
Q psy2930 216 KKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSG 289 (293)
Q Consensus 216 ~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~ 289 (293)
.....+....+++.+++.+|+|||.|.....- ..|.+-+++-+|++. .+|.++++..+.+.
T Consensus 191 -------~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e-~lG~TlVVNPGsL~~-----G~yAvI~l~~~~v~ 251 (255)
T PF14582_consen 191 -------IHVGSAAVRDLIKTYNPDIVLCGHIHESHGKE-SLGKTLVVNPGSLAE-----GDYAVIDLEQDKVE 251 (255)
T ss_dssp -------BTTSBHHHHHHHHHH--SEEEE-SSS-EE--E-EETTEEEEE--BGGG-----TEEEEEETTTTEEE
T ss_pred -------ccccHHHHHHHHHhcCCcEEEecccccchhhH-HhCCEEEecCccccc-----CceeEEEecccccc
Confidence 12334578999999999999999999987321 234677777778774 37999988776554
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-15 Score=114.57 Aligned_cols=203 Identities=14% Similarity=0.131 Sum_probs=109.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHH--HHHHHHHHHHHhc-CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREW--QMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
|||..+||+|+..... +.+..+...| +-......+.... .-|.|++.|||.....-. +..+.|+-+- .-
T Consensus 1 M~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~------ea~~Dl~~i~-~L 72 (230)
T COG1768 1 MRIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLE------EAEEDLRFIG-DL 72 (230)
T ss_pred CceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheech------hhhhhhhhhh-cC
Confidence 6899999999975443 1122221111 1111122333334 448999999999865411 1122222222 12
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCC---cceEEeCCEEEEEEeceeccCCCC-CCCchhH----HHHHH
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSM---VKLLSIKGSYFVLINSMALEGDGC-FLCKPAQ----DRISL 161 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~lds~~~~~~~~-~~~~~~~----~~l~~ 161 (293)
+|+ .+++.||||++++ +..+..+.+.+.. +..+...++.+++.-.=....... .+.+.++ +.+..
T Consensus 73 PG~-K~m~rGNHDYWw~------s~skl~n~lp~~l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~R 145 (230)
T COG1768 73 PGT-KYMIRGNHDYWWS------SISKLNNALPPILFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGR 145 (230)
T ss_pred CCc-EEEEecCCccccc------hHHHHHhhcCchHhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHH
Confidence 454 5899999999874 2455666666541 234556665555541111000111 1122222 23334
Q ss_pred HHHHhhh-cccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCcc
Q psy2930 162 ISAKLKC-CRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR 240 (293)
Q Consensus 162 l~~~l~~-~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~ 240 (293)
|+..+.+ .++ .....|||+|+|++...... .-+.++|++..+.
T Consensus 146 Lrlsa~a~l~k-----------~~~~fivM~HYPP~s~~~t~-------------------------~~~sevlee~rv~ 189 (230)
T COG1768 146 LRLSADAALPK-----------GVSKFIVMTHYPPFSDDGTP-------------------------GPFSEVLEEGRVS 189 (230)
T ss_pred HHHHHHHhccc-----------CcCeEEEEEecCCCCCCCCC-------------------------cchHHHHhhccee
Confidence 4432221 111 45678999999998765421 1357888899999
Q ss_pred EEEecCCCCCceee---ccCCCeeEEecc
Q psy2930 241 LVIDGHTHNGCHKY---HAYGKVHEYTVP 266 (293)
Q Consensus 241 lvl~GH~H~~~~~~---~~~~~~~~~~~~ 266 (293)
.++.||.|.....- ...+|+..+.+.
T Consensus 190 ~~lyGHlHgv~~p~~~~s~v~Gi~y~Lva 218 (230)
T COG1768 190 KCLYGHLHGVPRPNIGFSNVRGIEYMLVA 218 (230)
T ss_pred eEEeeeccCCCCCCCCcccccCceEEEEe
Confidence 99999999986421 112366555553
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.3e-14 Score=126.62 Aligned_cols=92 Identities=16% Similarity=0.231 Sum_probs=60.7
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhh-----
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL----- 85 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~----- 85 (293)
..|||+|+||+|+|....... +....+...+.+.+.+.+.++|+||++|||++...++ .+......+.+++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~--r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps-~~~~~~~~~~lr~~~~g~~ 78 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPV--RGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPS-RKSLYQVLRSLRLYCLGDK 78 (405)
T ss_pred CceEEEEEcCCCCCCccCCch--hhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCC-HHHHHHHHHHHHHhhccCC
Confidence 569999999999985433211 1111233445566666778999999999999976653 34444444555431
Q ss_pred ------hcC--------------------CCCceEEEecCCCCCCC
Q psy2930 86 ------FST--------------------PDGTELHVVPGNHDMGF 105 (293)
Q Consensus 86 ------~~~--------------------~~~~~~~~v~GNHD~~~ 105 (293)
+.. ..++||++|.||||...
T Consensus 79 p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 79 PCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred ccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 100 14799999999999853
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >KOG3770|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=131.87 Aligned_cols=242 Identities=16% Similarity=0.191 Sum_probs=149.0
Q ss_pred CCCCceEEEEEecCCcCCCCCC---------------------------chhHH-HH-hHHHHHHHHHHHHHh-cC-CCE
Q psy2930 8 ESINNIKAIFIADTHLLGPFRG---------------------------HWFDK-LR-REWQMYKTFQTAVAL-HQ-PEH 56 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~---------------------------~~~~~-~~-~~~~~~~~~~~~~~~-~~-pd~ 56 (293)
+++..+||+|++|+|....... .|-+- .+ ..+.+.++..+.+++ .+ +|+
T Consensus 134 ~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~iD~ 213 (577)
T KOG3770|consen 134 KNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDIDY 213 (577)
T ss_pred CCCCceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCCCE
Confidence 4446699999999999754310 11110 11 134455555555544 44 899
Q ss_pred EEEcCccCCCCccCC-h----hhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCC-----CCCch---------hHHHH
Q psy2930 57 IFVLGDLLDEGQYVG-G----EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHY-----RLHPY---------LNDRF 117 (293)
Q Consensus 57 vi~~GDl~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~-----~~~~~---------~~~~~ 117 (293)
|+.+||++..-.+.. . .......+.+.+.+ +++|||...||||..... ..... ....|
T Consensus 214 I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~F---pdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W 290 (577)
T KOG3770|consen 214 IIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYF---PDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAW 290 (577)
T ss_pred EEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhC---CCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhh
Confidence 999999998654322 2 22444455555555 689999999999985321 01111 01122
Q ss_pred HHHhCCC---------CcceEEeCCEEEEEEeceeccCCCCCC---CchhHHHHHHHHHHhhhcccCCCCCccccCCCCC
Q psy2930 118 SRAFNSS---------MVKLLSIKGSYFVLINSMALEGDGCFL---CKPAQDRISLISAKLKCCRKDRECPKSMKLGSYS 185 (293)
Q Consensus 118 ~~~~~~~---------~~~~~~~~~~~~i~lds~~~~~~~~~~---~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 185 (293)
..+.... .|-....+|.++|.||+.......... ......+|+|+..+|..+++ ++.
T Consensus 291 ~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~-----------~Ge 359 (577)
T KOG3770|consen 291 STWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES-----------AGE 359 (577)
T ss_pred hccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh-----------cCC
Confidence 2222221 133445699999999998876554321 12234569999999999876 788
Q ss_pred CCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcC--ccEEEecCCCCCceeeccCC-----
Q psy2930 186 QPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLN--PRLVIDGHTHNGCHKYHAYG----- 258 (293)
Q Consensus 186 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~--~~lvl~GH~H~~~~~~~~~~----- 258 (293)
.+-++.|+|+.. ..|.. +| . .-..+++.++. +...|.||+|.....+..+.
T Consensus 360 kVhil~HIPpG~---~~c~~---------------~w---s-~~f~~iv~r~~~tI~gqf~GH~h~d~f~v~yde~~~~p 417 (577)
T KOG3770|consen 360 KVHILGHIPPGD---GVCLE---------------GW---S-INFYRIVNRFRSTIAGQFYGHTHIDEFRVFYDEETGHP 417 (577)
T ss_pred EEEEEEeeCCCC---cchhh---------------hh---h-HHHHHHHHHHHHhhhhhccccCcceeEEEEeccccCCc
Confidence 999999999943 22221 11 1 12455666663 66789999999986542221
Q ss_pred CeeEEeccceeccCCCCCceEEEEEec
Q psy2930 259 KVHEYTVPSFSWRNKNNPSFLMGYVVE 285 (293)
Q Consensus 259 ~~~~~~~~s~~~~~~~~p~f~~~~~~~ 285 (293)
..--++.||+......+|+|.+..+++
T Consensus 418 ~~v~~i~~svtty~~~~p~yr~y~~~~ 444 (577)
T KOG3770|consen 418 IAVAYIGPSVTTYYNKNPGYRIYAVDS 444 (577)
T ss_pred eeeeeccccceehhccCCCceecccCc
Confidence 112255677777777789999988874
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.2e-14 Score=117.53 Aligned_cols=103 Identities=18% Similarity=0.271 Sum_probs=58.9
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh--cCCCEEEEcCccCCCCcc--CChhhHHHHHHHHHhhhcCCCC
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL--HQPEHIFVLGDLLDEGQY--VGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pd~vi~~GDl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+++||+|++..... ..+.+.+.+.+ .+||.|+++||+++.... ..........+.+..+. ..+
T Consensus 2 ~~iSDlHl~~~~~~-----------~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~--~~~ 68 (231)
T TIGR01854 2 LFISDLHLSPERPD-----------ITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVS--DQG 68 (231)
T ss_pred eEEEecCCCCCChh-----------HHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHH--HCC
Confidence 78999999754321 11122233322 289999999999985321 11122223333344433 346
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCC---CCcceEEeCCEEEEEE
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS---SMVKLLSIKGSYFVLI 139 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~l 139 (293)
+|+++++||||.... ..+.+..+- .....+.+++.+++++
T Consensus 69 ~~v~~v~GNHD~~~~--------~~~~~~~gi~~l~~~~~~~~~g~~ill~ 111 (231)
T TIGR01854 69 VPCYFMHGNRDFLIG--------KRFAREAGMTLLPDPSVIDLYGQKVLLM 111 (231)
T ss_pred CeEEEEcCCCchhhh--------HHHHHHCCCEEECCCEEEEECCEEEEEE
Confidence 899999999997421 223222221 1235567788888887
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=113.45 Aligned_cols=58 Identities=21% Similarity=0.217 Sum_probs=44.9
Q ss_pred HHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-CCCCceEEEEEecCCceeee
Q psy2930 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-KNNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 232 ~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-~~~p~f~~~~~~~~~~~~~~ 292 (293)
++++..+++++++||+|...... .+++..++.+|++... .+.++|.++++++ +.++++
T Consensus 96 ~~~~~~~~d~vi~GHtH~~~~~~--~~~~~~inpGs~~~~~~~~~~~~~i~~~~~-~~~~~~ 154 (155)
T cd00841 96 YLAKEGGADVVLYGHTHIPVIEK--IGGVLLLNPGSLSLPRGGGPPTYAILEIDD-KGEVEI 154 (155)
T ss_pred hhhhhcCCCEEEECcccCCccEE--ECCEEEEeCCCccCcCCCCCCeEEEEEecC-CCcEEE
Confidence 34455579999999999998653 3478889999988654 3567999999998 777764
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=114.37 Aligned_cols=56 Identities=21% Similarity=0.180 Sum_probs=41.4
Q ss_pred HHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCC-CCCceEEEEEecCCce
Q psy2930 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK-NNPSFLMGYVVENSSG 289 (293)
Q Consensus 232 ~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~-~~p~f~~~~~~~~~~~ 289 (293)
.+....+++++++||+|...... .+++..++.+|++.... ..|+|.++++.++..+
T Consensus 100 ~~~~~~~~d~vi~GHtH~~~~~~--~~~~~~iNpGs~~~~~~~~~~~~~il~~~~~~~~ 156 (158)
T TIGR00040 100 YLAKELGVDVLIFGHTHIPVAEE--LRGILLINPGSLTGPRNGNTPSYAILDVDKDKVT 156 (158)
T ss_pred HHHhccCCCEEEECCCCCCccEE--ECCEEEEECCccccccCCCCCeEEEEEecCCeEE
Confidence 33344578999999999997643 24788999998775443 3689999999877554
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=114.54 Aligned_cols=65 Identities=26% Similarity=0.305 Sum_probs=44.2
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
+||+++||+|.... . ...+.+++.+||+|+++||+++.. ....+.+.+ ...
T Consensus 1 ~rIa~isDiHg~~~------~----------~~~~~l~~~~pD~Vl~~GDi~~~~--------~~~~~~l~~-----l~~ 51 (238)
T cd07397 1 LRIAIVGDVHGQWD------L----------EDIKALHLLQPDLVLFVGDFGNES--------VQLVRAISS-----LPL 51 (238)
T ss_pred CEEEEEecCCCCch------H----------HHHHHHhccCCCEEEECCCCCcCh--------HHHHHHHHh-----CCC
Confidence 58999999996211 0 012345668999999999998632 122333333 246
Q ss_pred eEEEecCCCCCCCC
Q psy2930 93 ELHVVPGNHDMGFH 106 (293)
Q Consensus 93 ~~~~v~GNHD~~~~ 106 (293)
|+++++||||.++.
T Consensus 52 p~~~V~GNHD~~~~ 65 (238)
T cd07397 52 PKAVILGNHDAWYD 65 (238)
T ss_pred CeEEEcCCCccccc
Confidence 89999999999764
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-13 Score=110.71 Aligned_cols=59 Identities=19% Similarity=0.045 Sum_probs=43.6
Q ss_pred HHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC----C-CCCceEEEEEecCCceeee
Q psy2930 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN----K-NNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 232 ~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~----~-~~p~f~~~~~~~~~~~~~~ 292 (293)
++.++.+++++++||+|.+.... .+++..++.+|++... + +.|+|.+++++.++..+.+
T Consensus 100 ~~~~~~~~dvii~GHTH~p~~~~--~~g~~viNPGSv~~~~~~~~~~~~~syail~~~~~~~~~~~ 163 (178)
T cd07394 100 ALQRQLDVDILISGHTHKFEAFE--HEGKFFINPGSATGAFSPLDPNVIPSFVLMDIQGSKVVTYV 163 (178)
T ss_pred HHHHhcCCCEEEECCCCcceEEE--ECCEEEEECCCCCCCCCCCCCCCCCeEEEEEecCCeEEEEE
Confidence 34444578999999999987643 3479999999987432 1 3579999999888765543
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-13 Score=122.36 Aligned_cols=87 Identities=25% Similarity=0.336 Sum_probs=56.4
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+|+||+|+|....+.. +...-..+.+.+.+.+.+.+||+||++|||++.+.... .....+.++...+. ..++
T Consensus 1 mkilh~SDlHlG~~~~~~~--~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~--~a~~~~~~~l~~L~-~~~~ 75 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKS--RAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPS--YARELYNRFVVNLQ-QTGC 75 (407)
T ss_pred CEEEEEcccCCCCcccCcc--cHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcH--HHHHHHHHHHHHHH-hcCC
Confidence 7999999999986432211 11111234456677777899999999999999765321 11222333333232 3468
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
|+++|+||||..
T Consensus 76 ~v~~I~GNHD~~ 87 (407)
T PRK10966 76 QLVVLAGNHDSV 87 (407)
T ss_pred cEEEEcCCCCCh
Confidence 999999999974
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=106.66 Aligned_cols=64 Identities=22% Similarity=0.245 Sum_probs=40.0
Q ss_pred CCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee---ccCCCee
Q psy2930 185 SQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY---HAYGKVH 261 (293)
Q Consensus 185 ~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~---~~~~~~~ 261 (293)
.+.|+++|.|++...... .. ........+.+++++.+++++++||+|.+.... ...+++.
T Consensus 68 ~~~ilv~H~~p~~~~~~~----~~-------------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~t~ 130 (135)
T cd07379 68 DTDILVTHGPPYGHLDLV----SS-------------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVLDTDGETL 130 (135)
T ss_pred CCEEEEECCCCCcCcccc----cc-------------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEecccCCCEE
Confidence 367899999985432110 00 011223456778888899999999999997432 1344666
Q ss_pred EEec
Q psy2930 262 EYTV 265 (293)
Q Consensus 262 ~~~~ 265 (293)
++++
T Consensus 131 ~in~ 134 (135)
T cd07379 131 FVNA 134 (135)
T ss_pred EEeC
Confidence 6653
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.6e-13 Score=122.42 Aligned_cols=88 Identities=18% Similarity=0.289 Sum_probs=61.3
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+|+||+|+|...... ..+...-+.....+...+.+.++|+||++||+++.+.+. .+....+.+.|+++. ..++
T Consensus 1 mkilHtSD~HLG~~~~~~-~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps-~~a~~~~~~~l~~l~--~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNL-PSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS-PRALKLFLEALRRLK--DAGI 76 (390)
T ss_pred CeeEEecccccchhhccC-ccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC-HHHHHHHHHHHHHhc--cCCC
Confidence 799999999998422111 111121223444455556668999999999999986643 455666666676665 5789
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
|+++++||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999984
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-12 Score=122.24 Aligned_cols=125 Identities=18% Similarity=0.328 Sum_probs=72.6
Q ss_pred CCCCC------CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH---------hcCCCEEEEcCccCCCC
Q psy2930 3 WPASP------ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA---------LHQPEHIFVLGDLLDEG 67 (293)
Q Consensus 3 w~~~~------~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~pd~vi~~GDl~~~~ 67 (293)
||.++ ...+.++++++||+|+|...... ...+.|.++++ ..+++.||++||+++..
T Consensus 228 ~p~~p~~~~~~~~~~~~~i~~ISDlHlgs~~~~~---------~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~ 298 (504)
T PRK04036 228 RPDVPRTKEPPTKDEKVYAVFISDVHVGSKEFLE---------DAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGI 298 (504)
T ss_pred CCCCCccCCCCcCCCccEEEEEcccCCCCcchhH---------HHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccc
Confidence 56665 33556899999999997754211 11234555565 56899999999999852
Q ss_pred ccC--Ch---------hhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC------CcceEE
Q psy2930 68 QYV--GG---------EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS------MVKLLS 130 (293)
Q Consensus 68 ~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 130 (293)
... .. +++....+.+.++ ..++|++++|||||.......++.....+.+.+... ++..+.
T Consensus 299 ~~~p~~~~~~~~~~~~~~~~~l~~~L~~L---~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~v~~lsNP~~i~ 375 (504)
T PRK04036 299 GIYPGQEEELEIVDIYEQYEAAAEYLKQI---PEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHNVTFVSNPALVN 375 (504)
T ss_pred cCCccchhhccchhhHHHHHHHHHHHHhh---hcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCCeEEecCCeEEE
Confidence 210 00 1122222222222 357899999999998532111121123344444432 245567
Q ss_pred eCCEEEEEE
Q psy2930 131 IKGSYFVLI 139 (293)
Q Consensus 131 ~~~~~~i~l 139 (293)
++|.++++.
T Consensus 376 l~G~~iLl~ 384 (504)
T PRK04036 376 LHGVDVLIY 384 (504)
T ss_pred ECCEEEEEE
Confidence 788888776
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=119.04 Aligned_cols=84 Identities=26% Similarity=0.344 Sum_probs=54.7
Q ss_pred CCCCCCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHH
Q psy2930 4 PASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFY 83 (293)
Q Consensus 4 ~~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~ 83 (293)
|.++...+.++|+++||+|+.... . -..++...+....||+|+++||+++...... .......+.
T Consensus 36 ~~~~~~~~~~~iv~lSDlH~~~~~-----~-------~~~~~~~~i~~~~~DlivltGD~~~~~~~~~---~~~~~~~L~ 100 (284)
T COG1408 36 PKLPASLQGLKIVQLSDLHSLPFR-----E-------EKLALLIAIANELPDLIVLTGDYVDGDRPPG---VAALALFLA 100 (284)
T ss_pred CCCCcccCCeEEEEeehhhhchhh-----H-------HHHHHHHHHHhcCCCEEEEEeeeecCCCCCC---HHHHHHHHH
Confidence 344456678999999999994432 1 1122344455677799999999999622222 333333344
Q ss_pred hhhcCCCCceEEEecCCCCCCC
Q psy2930 84 SLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 84 ~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
++. ...+++++.||||++.
T Consensus 101 ~L~---~~~gv~av~GNHd~~~ 119 (284)
T COG1408 101 KLK---APLGVFAVLGNHDYGV 119 (284)
T ss_pred hhh---ccCCEEEEeccccccc
Confidence 432 4568999999999864
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.7e-13 Score=113.31 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=55.9
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC-
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG- 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 91 (293)
|||+|+||+|+|....+.. +........+.+.+.+.+.+||+|+++||+++...... .....+.+.+.++. ..+
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~-~~~~~~~~~l~~l~--~~~~ 75 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPA-EAQELFNAFFRNLS--DANP 75 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCH-HHHHHHHHHHHHHH--hcCC
Confidence 7999999999987543211 11111234455666667789999999999999765322 22222223333332 234
Q ss_pred ceEEEecCCCCCC
Q psy2930 92 TELHVVPGNHDMG 104 (293)
Q Consensus 92 ~~~~~v~GNHD~~ 104 (293)
+|+++++||||..
T Consensus 76 i~v~~i~GNHD~~ 88 (253)
T TIGR00619 76 IPIVVISGNHDSA 88 (253)
T ss_pred ceEEEEccCCCCh
Confidence 8999999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.7e-14 Score=116.89 Aligned_cols=205 Identities=18% Similarity=0.203 Sum_probs=112.7
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCc--cCChhhHHHHHHHHHhhhcCCCC
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQ--YVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
++|||+|+++.... ..+.|.+.++.. +.|.++++|||++... ...+....+...++..+. ..|
T Consensus 1 lFISDlHL~~~~p~-----------~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a--~~G 67 (237)
T COG2908 1 LFISDLHLGPKRPA-----------LTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA--RKG 67 (237)
T ss_pred CeeeccccCCCCcH-----------HHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH--hcC
Confidence 47999999755431 223455555555 4599999999999643 212334555566677766 689
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCC----CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhh
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS----SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLK 167 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~ 167 (293)
+++|.++||||.- ..++|...++. +.+-.....|-+++++ +|+..... .....|+.....
T Consensus 68 ~~v~~i~GN~Dfl--------l~~~f~~~~g~~~l~~~~~~~~l~g~~~Ll~-----HGD~f~t~---~~~y~~~r~~~~ 131 (237)
T COG2908 68 TRVYYIHGNHDFL--------LGKRFAQEAGGMTLLPDPIVLDLYGKRILLA-----HGDTFCTD---DRAYQWFRYKVH 131 (237)
T ss_pred CeEEEecCchHHH--------HHHHHHhhcCceEEcCcceeeeecCcEEEEE-----eCCcccch---HHHHHHHHHHcc
Confidence 9999999999963 23556666662 2356777888888887 45433221 122223322111
Q ss_pred hcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCC---chhhhhcccccccccccCHHHHHHHHhhcCccEEEe
Q psy2930 168 CCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDS---APDIEKRKKFRQRWECISKESTDMLLDYLNPRLVID 244 (293)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~ 244 (293)
. ..-..++++.|+... ..-...+.. .......+.+ .+.-.......+..++.+++.+++
T Consensus 132 ~---------------~~~~~lflnl~l~~R-~ri~~k~r~~s~~~k~~~~~~~--~i~d~~~~~v~~~~~~~~vd~vI~ 193 (237)
T COG2908 132 W---------------AWLQLLFLNLPLRVR-RRIAYKIRSLSSWAKKKVKKAV--NIMDVNPAAVADEARRHGVDGVIH 193 (237)
T ss_pred c---------------HHHHHHHHHhHHHHH-HHHHHHHHHhhHHhHHhhhhHH--HHHHhhHHHHHHHHHHcCCCEEEe
Confidence 0 001112233332100 000000000 0000000000 012223446677888889999999
Q ss_pred cCCCCCceeeccCCCeeEEecccee
Q psy2930 245 GHTHNGCHKYHAYGKVHEYTVPSFS 269 (293)
Q Consensus 245 GH~H~~~~~~~~~~~~~~~~~~s~~ 269 (293)
||+|+.... ...+...+++|+..
T Consensus 194 GH~Hr~ai~--~i~~~~yi~lGdW~ 216 (237)
T COG2908 194 GHTHRPAIH--NIPGITYINLGDWV 216 (237)
T ss_pred cCcccHhhc--cCCCceEEecCcch
Confidence 999999863 33367888888743
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-12 Score=105.98 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=34.2
Q ss_pred CccEEEecCCCCCceeeccCCCeeEEeccceeccCC-CCCceEEEEE
Q psy2930 238 NPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK-NNPSFLMGYV 283 (293)
Q Consensus 238 ~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~-~~p~f~~~~~ 283 (293)
+.+++++||+|.+.... .++...++.+|++...+ +.++|.++++
T Consensus 118 ~~d~vi~GHtH~p~~~~--~~~~~~iNpGs~~~p~~~~~~s~~il~~ 162 (182)
T PRK09453 118 DGDVLVYGHTHIPVAEK--QGGIILFNPGSVSLPKGGYPASYGILDD 162 (182)
T ss_pred CCCEEEECCCCCCcceE--ECCEEEEECCCccccCCCCCCeEEEEEC
Confidence 57899999999987643 24789999999875443 4578988887
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-12 Score=102.37 Aligned_cols=160 Identities=21% Similarity=0.174 Sum_probs=101.5
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
.|+|+++||+|..... .....+.....++|+||++||.+.... ...+... ..
T Consensus 1 ~m~ilviSDtH~~~~~--------------~~~~~~~~~~~~~d~vih~GD~~~~~~----------~~~l~~~----~~ 52 (172)
T COG0622 1 MMKILVISDTHGPLRA--------------IEKALKIFNLEKVDAVIHAGDSTSPFT----------LDALEGG----LA 52 (172)
T ss_pred CcEEEEEeccCCChhh--------------hhHHHHHhhhcCCCEEEECCCcCCccc----------hHHhhcc----cc
Confidence 4899999999994321 111233444579999999999998543 2223331 14
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhccc
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~ 171 (293)
.++++|.||.|..... ..+++ ...+.+++.+|.+. +|..+.. ....
T Consensus 53 ~~i~~V~GN~D~~~~~-----------~~~p~--~~~~~~~g~ki~l~-----HGh~~~~-~~~~--------------- 98 (172)
T COG0622 53 AKLIAVRGNCDGEVDQ-----------EELPE--ELVLEVGGVKIFLT-----HGHLYFV-KTDL--------------- 98 (172)
T ss_pred cceEEEEccCCCcccc-----------ccCCh--hHeEEECCEEEEEE-----CCCcccc-ccCH---------------
Confidence 5899999999985210 11111 25566666666665 3321110 0001
Q ss_pred CCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCc
Q psy2930 172 DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGC 251 (293)
Q Consensus 172 ~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~ 251 (293)
..+..+-+..+.++++.||+|.+.
T Consensus 99 --------------------------------------------------------~~l~~la~~~~~Dvli~GHTH~p~ 122 (172)
T COG0622 99 --------------------------------------------------------SLLEYLAKELGADVLIFGHTHKPV 122 (172)
T ss_pred --------------------------------------------------------HHHHHHHHhcCCCEEEECCCCccc
Confidence 122333333378999999999998
Q ss_pred eeeccCCCeeEEeccceeccCCCCC-ceEEEEEecCCceee
Q psy2930 252 HKYHAYGKVHEYTVPSFSWRNKNNP-SFLMGYVVENSSGVN 291 (293)
Q Consensus 252 ~~~~~~~~~~~~~~~s~~~~~~~~p-~f~~~~~~~~~~~~~ 291 (293)
... .+++..++-+|+|...++.| +|.++++.+..+.+.
T Consensus 123 ~~~--~~~i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~~ 161 (172)
T COG0622 123 AEK--VGGILLVNPGSVSGPRGGNPASYAILDVDNLEVEVL 161 (172)
T ss_pred EEE--ECCEEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEEE
Confidence 754 34789999999997665555 999999988776654
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=4e-13 Score=112.25 Aligned_cols=106 Identities=25% Similarity=0.310 Sum_probs=60.6
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccC---ChhhHHHHHHHHHhhhcCCCCc
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYV---GGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
+++||+|++........ ....+.......+||.|+++||+++..... ...........+.+.. ..++
T Consensus 1 ~~iSDlHlg~~~~~~~~--------~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 70 (217)
T cd07398 1 LFISDLHLGDGGPAADF--------LLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA--DRGT 70 (217)
T ss_pred CEeeeecCCCCCCCHHH--------HHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH--HCCC
Confidence 47999999876543210 111111111135999999999999853211 1122222223444544 4678
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCC---Ccc-eEEeCCEEEEEE
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS---MVK-LLSIKGSYFVLI 139 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~i~l 139 (293)
+++.++||||.... ..+....+.. ... .+..++.+++++
T Consensus 71 ~v~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 113 (217)
T cd07398 71 RVYYVPGNHDFLLG--------DFFAEELGLILLPDPLVHLELDGKRILLE 113 (217)
T ss_pred eEEEECCCchHHHH--------hHHHHHcCCEEeccceEEEeeCCeEEEEE
Confidence 99999999998531 1122221211 123 678899999997
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-12 Score=96.72 Aligned_cols=48 Identities=21% Similarity=0.240 Sum_probs=35.3
Q ss_pred CHHHHHHHHhhcCccEEEecCCCCCceee---ccCCCeeEEeccceeccCCCCCceEEEEE
Q psy2930 226 SKESTDMLLDYLNPRLVIDGHTHNGCHKY---HAYGKVHEYTVPSFSWRNKNNPSFLMGYV 283 (293)
Q Consensus 226 ~~~~~~~ll~~~~~~lvl~GH~H~~~~~~---~~~~~~~~~~~~s~~~~~~~~p~f~~~~~ 283 (293)
+.+.+.+++.+.+++++|+||+|...... ...+++.++++ .||.++++
T Consensus 79 g~~~l~~~l~~~~~~~vl~GH~H~~~~~~~~~~~~~~t~~~n~----------~~~~~~~~ 129 (129)
T cd07403 79 GFEAFLDFIDRFRPKLFIHGHTHLNYGYQLRIRRVGDTTVINA----------YGYRVLEL 129 (129)
T ss_pred CHHHHHHHHHHHCCcEEEEcCcCCCcCccccccccCCEEEEeC----------CcEEEEeC
Confidence 34567788888899999999999998754 23456777765 47777764
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=97.34 Aligned_cols=69 Identities=29% Similarity=0.320 Sum_probs=45.2
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEE
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELH 95 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (293)
+++||+|++........ ......+.++|+||++||+++.+.......+.. +.... ..+.|++
T Consensus 1 ~~~gD~h~~~~~~~~~~------------~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~----~~~~~--~~~~~~~ 62 (131)
T cd00838 1 AVISDIHGNLEALEAVL------------EAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAA----LALLL--LLGIPVY 62 (131)
T ss_pred CeeecccCCccchHHHH------------HHHHhcccCCCEEEECCcccCCCCCchHHHHHH----HHHhh--cCCCCEE
Confidence 47899999654321100 023445679999999999999876443222221 22333 4688999
Q ss_pred EecCCCC
Q psy2930 96 VVPGNHD 102 (293)
Q Consensus 96 ~v~GNHD 102 (293)
+++||||
T Consensus 63 ~~~GNHD 69 (131)
T cd00838 63 VVPGNHD 69 (131)
T ss_pred EeCCCce
Confidence 9999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.7e-11 Score=102.20 Aligned_cols=115 Identities=21% Similarity=0.296 Sum_probs=61.7
Q ss_pred EEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc-----CCCEEEEcCccCCCCccC--Ch-----hhHHHHHHHHH
Q psy2930 16 IFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-----QPEHIFVLGDLLDEGQYV--GG-----EDFDNYVRRFY 83 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~pd~vi~~GDl~~~~~~~--~~-----~~~~~~~~~~~ 83 (293)
+++||+|++...... ...+.+.++++.. ++|.||++||+++..... .. ....+.++.+.
T Consensus 2 ~~iSDlHl~~~~~~~---------~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (243)
T cd07386 2 VFISDVHVGSKTFLE---------DAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAA 72 (243)
T ss_pred EEecccCCCchhhhH---------HHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHH
Confidence 789999997653211 1223455555554 569999999999963210 00 01111122333
Q ss_pred hhhc-CCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEE
Q psy2930 84 SLFS-TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLI 139 (293)
Q Consensus 84 ~~~~-~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~l 139 (293)
+++. ...+++++++|||||.......++.....+.+.+.. .+.+.+.++|.+|++.
T Consensus 73 ~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~~~~v~~l~Np~~~~~~g~~i~~~ 135 (243)
T cd07386 73 EYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFLPGNVEFVSNPALVKIHGVDVLIY 135 (243)
T ss_pred HHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcCCCceEEeCCCCEEEECCEEEEEE
Confidence 3321 134789999999999853211111112233332211 1235567788887765
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.6e-10 Score=94.65 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=44.9
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
++|+++||+|. ......... .......+.+.+++..|| +++.+||+++..............+.+.. .+
T Consensus 1 l~i~~~sD~hg-~~~~~~~~~----g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~-----~g 70 (252)
T cd00845 1 LTILHTNDLHG-HFEPAGGVG----GAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNA-----LG 70 (252)
T ss_pred CEEEEeccccc-CccccCCcC----CHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHh-----cC
Confidence 58999999994 321100000 011122344455556788 77999999986553221122222333332 23
Q ss_pred ceEEEecCCCCCCCC
Q psy2930 92 TELHVVPGNHDMGFH 106 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~ 106 (293)
..++++||||+...
T Consensus 71 -~d~~~~GNHe~d~g 84 (252)
T cd00845 71 -YDAVTIGNHEFDYG 84 (252)
T ss_pred -CCEEeecccccccc
Confidence 23677899998653
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-09 Score=98.01 Aligned_cols=124 Identities=16% Similarity=0.241 Sum_probs=71.9
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc-----CCCEEEEcCccCCCCc--cCChhh-----H
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-----QPEHIFVLGDLLDEGQ--YVGGED-----F 75 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~pd~vi~~GDl~~~~~--~~~~~~-----~ 75 (293)
..+..++++++||+|.|+..- .. ..+..+.++++-. +..+++++||++++.. .-+..+ .
T Consensus 221 ~~~e~v~v~~isDih~GSk~F---~~------~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di 291 (481)
T COG1311 221 TGDERVYVALISDIHRGSKEF---LE------DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADI 291 (481)
T ss_pred CCCcceEEEEEeeeecccHHH---HH------HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccc
Confidence 555668999999999977632 10 1223455555432 5689999999999522 111111 0
Q ss_pred HHHHHHHHhhhc-CCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEEe
Q psy2930 76 DNYVRRFYSLFS-TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLIN 140 (293)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~ld 140 (293)
.+.++++++.+. ....+.++++|||||.......++.....-+..|.. .+++.+.++|+.++...
T Consensus 292 ~~qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~~~n~~~v~NP~~~~l~G~~vL~~h 363 (481)
T COG1311 292 YEQYEELAEFLDQVPEHIKVFIMPGNHDAVRQALPQPHFPELIKSLFSLNNLLFVSNPALVSLHGVDVLIYH 363 (481)
T ss_pred hHHHHHHHHHHhhCCCCceEEEecCCCCccccccCCCCcchhhcccccccceEecCCCcEEEECCEEEEEec
Confidence 111333444332 156888999999999865443333222222222221 14678888998888763
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.9e-09 Score=89.36 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=44.6
Q ss_pred eEEEEEecCCcCCCCC-CchhHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFR-GHWFDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
++|++++|+|--.+.. +.+.. + ....++.+.+++.+|+ +++.+||+++.+......+-...++.+..+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG-~----~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l----- 70 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGG-A----ARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNAL----- 70 (257)
T ss_pred CeEEEEccceeecccCCCCcCC-H----HHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhc-----
Confidence 5899999999322111 11111 1 1123344445556777 999999999865322111112223333322
Q ss_pred CceEEEecCCCCCCCC
Q psy2930 91 GTELHVVPGNHDMGFH 106 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~ 106 (293)
+. -++++||||+.++
T Consensus 71 ~~-d~~~~GNHefd~g 85 (257)
T cd07406 71 GV-DLACFGNHEFDFG 85 (257)
T ss_pred CC-cEEeecccccccC
Confidence 22 3778999999653
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-09 Score=92.22 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=100.8
Q ss_pred eEEEEEecCCcCCCCCCc---hhHHHHhHHHHHHHHHHHHHhcCCCEEEE-cCccCCCCccCChh------hHHHHHHHH
Q psy2930 13 IKAIFIADTHLLGPFRGH---WFDKLRREWQMYKTFQTAVALHQPEHIFV-LGDLLDEGQYVGGE------DFDNYVRRF 82 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pd~vi~-~GDl~~~~~~~~~~------~~~~~~~~~ 82 (293)
++|++++|+|..-..... ...... .......+.+.+++.+|+.+++ +||+++......-. .-...++.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~g-g~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASG-GLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCcc-CHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHH
Confidence 589999999954221100 000000 1111233455556668888887 99999854311100 001223333
Q ss_pred HhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC-----------------CCcceEEeC-CEEEEEEeceec
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS-----------------SMVKLLSIK-GSYFVLINSMAL 144 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-~~~~i~lds~~~ 144 (293)
..+ +.. ++++||||+.++.. ......+..+. ..+.++..+ |+++-++.-..-
T Consensus 80 n~~-----g~d-~~~lGNHe~d~g~~----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~ 149 (277)
T cd07410 80 NAL-----GYD-AGTLGNHEFNYGLD----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTP 149 (277)
T ss_pred Hhc-----CCC-EEeecccCcccCHH----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCc
Confidence 322 333 77789999865321 11111111111 113466788 877777632211
Q ss_pred cCC---------CCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhc
Q psy2930 145 EGD---------GCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKR 215 (293)
Q Consensus 145 ~~~---------~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~ 215 (293)
... +..+... .+.+++..++|+.. ..+.+|+++|......... .
T Consensus 150 ~~~~~~~~~~~~~~~~~d~-~~~~~~~v~~lr~~-------------~~D~IIvl~H~g~~~~~~~-~------------ 202 (277)
T cd07410 150 QIPNWEKPNLIGGLKFTDP-VETAKKYVPKLRAE-------------GADVVVVLAHGGFERDLEE-S------------ 202 (277)
T ss_pred ccccccCcccCCCcEEcCH-HHHHHHHHHHHHHc-------------CCCEEEEEecCCcCCCccc-c------------
Confidence 111 1111111 12344444455431 3567889999887543210 0
Q ss_pred ccccccccccCHHHHHHHHhh-cCccEEEecCCCCCceeeccCCCeeEEecc
Q psy2930 216 KKFRQRWECISKESTDMLLDY-LNPRLVIDGHTHNGCHKYHAYGKVHEYTVP 266 (293)
Q Consensus 216 ~~~~~~~~~l~~~~~~~ll~~-~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~ 266 (293)
........++.++ .++++||+||+|...... ..++++++.++
T Consensus 203 --------~~~~~~~~~la~~~~~vD~IlgGHsH~~~~~~-~~~~~~v~q~g 245 (277)
T cd07410 203 --------LTGENAAYELAEEVPGIDAILTGHQHRRFPGP-TVNGVPVVQPG 245 (277)
T ss_pred --------cCCccHHHHHHhcCCCCcEEEeCCCccccccC-CcCCEEEEcCC
Confidence 0001123455555 479999999999886531 22355555444
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.6e-11 Score=94.87 Aligned_cols=78 Identities=18% Similarity=0.176 Sum_probs=45.2
Q ss_pred EEEecCCcCCCCCCch-hHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 16 IFIADTHLLGPFRGHW-FDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 16 ~~iSD~H~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
.++||+|+|....... .....+...+.+++.+.+.+. ++|.|+++||+++.+... .+ .+.+.+ .+.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~---~~---~~~l~~-----~~~ 70 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAG---TE---LELLSR-----LNG 70 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChH---HH---HHHHHh-----CCC
Confidence 5799999987632110 000011112334444444443 789999999999976421 11 222322 345
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
|++.|+||||..
T Consensus 71 ~~~~v~GNHD~~ 82 (168)
T cd07390 71 RKHLIKGNHDSS 82 (168)
T ss_pred CeEEEeCCCCch
Confidence 899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-08 Score=86.51 Aligned_cols=174 Identities=17% Similarity=0.134 Sum_probs=89.2
Q ss_pred cCCCEEEEcCccCCCCccCChhhHH-----HHHHHHHhhhcC--CCCceEEEecCCCCCCCCCCCCchhHHHHHHHh-CC
Q psy2930 52 HQPEHIFVLGDLLDEGQYVGGEDFD-----NYVRRFYSLFST--PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAF-NS 123 (293)
Q Consensus 52 ~~pd~vi~~GDl~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~ 123 (293)
.++|+||++||+.........+... .....|.+.+.. ..++|+++|.||||.. ..+.+.. +.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~----------~~l~~l~~gg 96 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEAS----------NYLWELPYGG 96 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCH----------HHHHhhcCCC
Confidence 4799999999997644322111000 012223333221 3567789999999952 1111111 11
Q ss_pred ---C------CcceEEeCCEEEEEEeceeccCC----CCCCCchhHHHHHHHH-------HHhhhcccCCCCCccccCCC
Q psy2930 124 ---S------MVKLLSIKGSYFVLINSMALEGD----GCFLCKPAQDRISLIS-------AKLKCCRKDRECPKSMKLGS 183 (293)
Q Consensus 124 ---~------~~~~~~~~~~~~i~lds~~~~~~----~~~~~~~~~~~l~~l~-------~~l~~~~~~~~~~~~~~~~~ 183 (293)
+ ...++.++|++|.++.+..-... ........+.++..+- ..|... .
T Consensus 97 ~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~-------------~ 163 (262)
T cd00844 97 WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL-------------K 163 (262)
T ss_pred eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc-------------C
Confidence 1 13567789999999854331111 0001112334443321 112111 2
Q ss_pred CCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccc--ccccCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 184 YSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQR--WECISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 184 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
...-|+++|.||....... +..........+.+. -..+......++++..+|+++|+||.|....
T Consensus 164 ~~vDIlLSHdWP~gI~~~~----~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~ 230 (262)
T cd00844 164 QPIDIFLSHDWPRGIYKHG----DKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFA 230 (262)
T ss_pred CCCcEEEeCCCCcchhhcc----chHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccc
Confidence 3467999999996543211 000000000000000 0134556788999999999999999999665
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.9e-09 Score=87.92 Aligned_cols=209 Identities=14% Similarity=0.139 Sum_probs=111.1
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-----------hcCCCEEEEcCccCCCCccCC-----------
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-----------LHQPEHIFVLGDLLDEGQYVG----------- 71 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~pd~vi~~GDl~~~~~~~~----------- 71 (293)
.++++||+|+|+...... + .+.+.+++. ..+...+|++||.++......
T Consensus 1 ~i~~vSgL~ig~~~~~~~--~-------l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~ 71 (257)
T cd07387 1 YIALVSGLGLGGNAESSL--S-------LQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTK 71 (257)
T ss_pred CEEEEcccccCCCccchH--H-------HHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhcccc
Confidence 379999999988743221 1 122344443 235568999999999543211
Q ss_pred ------hhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCC-CCCchhHHHHHHH------hCCCCcceEEeCCEEEEE
Q psy2930 72 ------GEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHY-RLHPYLNDRFSRA------FNSSMVKLLSIKGSYFVL 138 (293)
Q Consensus 72 ------~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~ 138 (293)
.+++.. ++.|..-+ ...+||.++|||||-.... ...+.....|... -.-.+++.+.++|++|++
T Consensus 72 ~~~~~~~~~~~~-ld~~l~~l--~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLg 148 (257)
T cd07387 72 KSSAASVEAVKE-LDNFLSQL--ASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLG 148 (257)
T ss_pred ccchhhHHHHHH-HHHHHHhh--hcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEE
Confidence 111222 22222222 4689999999999985422 2222223334321 111257889999999999
Q ss_pred EeceeccCC-CCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccc
Q psy2930 139 INSMALEGD-GCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKK 217 (293)
Q Consensus 139 lds~~~~~~-~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~ 217 (293)
..+....-- .+. .....++.+++.|+-. |..|.......|.+.. +++
T Consensus 149 tsGqni~Di~ky~---~~~~~l~~me~~L~wr----------------------HlaPTaPDTL~~yP~~-----~~D-- 196 (257)
T cd07387 149 TSGQNVDDILKYS---SLESRLDILERTLKWR----------------------HIAPTAPDTLWCYPFT-----DRD-- 196 (257)
T ss_pred ECCCCHHHHHHhC---CCCCHHHHHHHHHHhc----------------------ccCCCCCCccccccCC-----CCC--
Confidence 744332211 111 1123355555555422 4443222222232210 000
Q ss_pred ccccccccCHHHHHHHHhhcCccEEEecCCCCCceeecc---CCCeeEEeccceeccCCCCCceEEEEEe
Q psy2930 218 FRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHA---YGKVHEYTVPSFSWRNKNNPSFLMGYVV 284 (293)
Q Consensus 218 ~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~---~~~~~~~~~~s~~~~~~~~p~f~~~~~~ 284 (293)
..++ + .-|+++|+||.|........ ...+..+++|+|+- .....++.+.
T Consensus 197 ----pfvi---------~-~~PhVyf~Gnq~~f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~ 248 (257)
T cd07387 197 ----PFIL---------E-ECPHVYFAGNQPKFGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLR 248 (257)
T ss_pred ----ceee---------c-CCCCEEEeCCCcceeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECC
Confidence 1122 1 14999999999998765421 22589999999862 3345555554
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=90.79 Aligned_cols=50 Identities=22% Similarity=0.381 Sum_probs=33.9
Q ss_pred cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCC
Q psy2930 52 HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 52 ~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~ 104 (293)
.+.|.++++||+++.|. ...+....+.++..... ..+.++++++||||..
T Consensus 31 ~~~d~lv~lGD~vdrG~--~~~~vl~~l~~l~~~~~-~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 31 GGSTHLVQLGDIFDRGP--DVIEILWLLYKLEQEAA-KAGGKVHFLLGNHELM 80 (208)
T ss_pred CCCcEEEEECCCcCCCc--CHHHHHHHHHHHHHHHH-hcCCeEEEeeCCCcHH
Confidence 36899999999999886 33344444444432221 2456899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.6e-08 Score=83.89 Aligned_cols=83 Identities=14% Similarity=0.214 Sum_probs=43.3
Q ss_pred eEEEEEecCCcCCCCC-CchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFR-GHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
++|+++||+|...... .... -+. ++ .++.+.+++.++++++.+||++..........-....+.+.. .+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~-g~~---~l-~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~-----~g 70 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGI-GYA---KL-ATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNA-----VG 70 (257)
T ss_pred CEEEEeccCcccccCCCCccc-cHH---HH-HHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHh-----cC
Confidence 5899999999743221 1100 011 12 222333333368999999999985432111111122222322 34
Q ss_pred ceEEEecCCCCCCCC
Q psy2930 92 TELHVVPGNHDMGFH 106 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~ 106 (293)
.. ++++||||+.++
T Consensus 71 ~d-~~~~GNHefd~G 84 (257)
T cd07408 71 YD-AVTPGNHEFDYG 84 (257)
T ss_pred Cc-EEccccccccCC
Confidence 44 467899998653
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.5e-10 Score=91.05 Aligned_cols=84 Identities=24% Similarity=0.420 Sum_probs=53.6
Q ss_pred EEEecCCcCCCCC----CchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 16 IFIADTHLLGPFR----GHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 16 ~~iSD~H~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+++||+|+|.... +..... ...+...+.+.+.+++.+||.|+++||+++.........+.. .. +.... ..+
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~-~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~-~~-~~~~~--~~~ 75 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPR-GQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEE-VA-FLRLL--AKD 75 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCc-ccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHH-HH-HHHhc--cCC
Confidence 5799999986531 111111 112245667778888899999999999998654333222222 11 22222 467
Q ss_pred ceEEEecCCCCCC
Q psy2930 92 TELHVVPGNHDMG 104 (293)
Q Consensus 92 ~~~~~v~GNHD~~ 104 (293)
+++++++||||..
T Consensus 76 ~~v~~i~GNHD~~ 88 (172)
T cd07391 76 VDVILIRGNHDGG 88 (172)
T ss_pred CeEEEEcccCccc
Confidence 8999999999985
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.00 E-value=2.4e-08 Score=92.68 Aligned_cols=246 Identities=10% Similarity=0.097 Sum_probs=112.1
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCcc--------------------
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQY-------------------- 69 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~-------------------- 69 (293)
...+||++.|+-+..... . ..+.+++++.+||++|++||.+.....
T Consensus 103 ~~~~r~a~~SC~~~~~~~----~----------~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~ 168 (453)
T PF09423_consen 103 PDPFRFAFGSCQNYEDGY----F----------PAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHE 168 (453)
T ss_dssp ---EEEEEE----CCC-----------------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS
T ss_pred CCceEEEEECCCCcccCh----H----------HHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccccccc
Confidence 346999999999873322 1 223334444689999999998885321
Q ss_pred -CChhhHHHHH------HHHHhhhcCCCCceEEEecCCCCCCCCCC----CC-----c-------hhHHHHHHHhCCC--
Q psy2930 70 -VGGEDFDNYV------RRFYSLFSTPDGTELHVVPGNHDMGFHYR----LH-----P-------YLNDRFSRAFNSS-- 124 (293)
Q Consensus 70 -~~~~~~~~~~------~~~~~~~~~~~~~~~~~v~GNHD~~~~~~----~~-----~-------~~~~~~~~~~~~~-- 124 (293)
.+.+.++..+ ..+++++ ..+|++++.=.||+..+.. .. . .....|..+.+..
T Consensus 169 ~~~l~~yR~~y~~~~~~p~l~~~~---~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~ 245 (453)
T PF09423_consen 169 AETLDDYRRRYRQYRSDPDLRRLH---ANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNP 245 (453)
T ss_dssp --SHHHHHHHHHHHHT-HHHHHHH---HHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GG
T ss_pred cccHHHHHHHHHHHcCCHHHHHHh---hcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCC
Confidence 1112222222 2233333 4679999999999954321 00 0 1112222222211
Q ss_pred --------CcceEEeCC-EEEEEEeceeccCCC--------------CCCCchhHHHHHHHHHHhhhcccCCCCCccccC
Q psy2930 125 --------MVKLLSIKG-SYFVLINSMALEGDG--------------CFLCKPAQDRISLISAKLKCCRKDRECPKSMKL 181 (293)
Q Consensus 125 --------~~~~~~~~~-~~~i~lds~~~~~~~--------------~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~ 181 (293)
.++.+.+++ +.|++||+..+-... ....-+++.|++||++.|..+
T Consensus 246 ~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s------------ 313 (453)
T PF09423_consen 246 DPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASS------------ 313 (453)
T ss_dssp G-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-------------
T ss_pred CccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcC------------
Confidence 256788999 999999998776531 111236789999999999975
Q ss_pred CCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCcc--EEEecCCCCCceee-ccCC
Q psy2930 182 GSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR--LVIDGHTHNGCHKY-HAYG 258 (293)
Q Consensus 182 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~--lvl~GH~H~~~~~~-~~~~ 258 (293)
....+|+++-.|+............. .....| ++| ...++.+.++|++.+++ ++|+|-.|...... ....
T Consensus 314 -~a~~kvi~s~v~~~~~~~~~~~~~~~----~~~d~W-~g~-~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~ 386 (453)
T PF09423_consen 314 -QATWKVIGSSVPFSPLNFPDAAEGLP----FNMDSW-DGY-PAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDD 386 (453)
T ss_dssp --SSEEEEE-SS--S---SS-SS-S------EETTSG-GGS-HHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESST
T ss_pred -CCcEEEEEeCCceecccccccccccc----cCCCch-hhC-HHHHHHHHHHHHhhCCCCEEEEecCcchheeeeccccc
Confidence 45678888887775433211000000 000011 112 12344556666666664 88999999997644 1111
Q ss_pred ---------CeeEEeccceeccC------------------------CCCCceEEEEEecCCceee
Q psy2930 259 ---------KVHEYTVPSFSWRN------------------------KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 259 ---------~~~~~~~~s~~~~~------------------------~~~p~f~~~~~~~~~~~~~ 291 (293)
.+.++++++++... ...-||.+++++++.++++
T Consensus 387 ~~~~~~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~~~~~~~~~ 452 (453)
T PF09423_consen 387 ADPPDGPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDITPERVTAE 452 (453)
T ss_dssp T---TTS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEEETTEEEEE
T ss_pred ccccCCCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEEccceEEEE
Confidence 36888888765211 0234899999998887764
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.3e-07 Score=76.13 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=43.3
Q ss_pred eEEEEEecCCcCCCCCC-c--------hhHHHHhHHHHHHHHHHHHHhc-CCCEE-EEcCccCCCCccCChhhHHHHHHH
Q psy2930 13 IKAIFIADTHLLGPFRG-H--------WFDKLRREWQMYKTFQTAVALH-QPEHI-FVLGDLLDEGQYVGGEDFDNYVRR 81 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~-~pd~v-i~~GDl~~~~~~~~~~~~~~~~~~ 81 (293)
++|++++|+|.--.... . ...... ......++.+.+++. .+|.+ +.+||+++.............++.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~g-G~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAG-GFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccC-cHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHH
Confidence 47999999998532210 0 000000 111223445555556 89987 469999986542111111222222
Q ss_pred HHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 82 FYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 82 ~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
+.. .++.++.||||+..+
T Consensus 80 l~~-------~g~da~~GNHefd~g 97 (264)
T cd07411 80 LNA-------LGVDAMVGHWEFTYG 97 (264)
T ss_pred HHh-------hCCeEEecccccccC
Confidence 222 233333399998653
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.9e-07 Score=93.52 Aligned_cols=81 Identities=19% Similarity=0.127 Sum_probs=46.1
Q ss_pred CCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEE-cCccCCCCccCChhhHHHHHHHHHhhhc
Q psy2930 9 SINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFV-LGDLLDEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~-~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
+...++|++++|+|..-. . ..+ ...+.+.+++.+|+.|++ +||++..............++.+.. +
T Consensus 657 ~~~~l~Il~~nD~Hg~l~---g-~~r-------~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~-l- 723 (1163)
T PRK09419 657 DNWELTILHTNDFHGHLD---G-AAK-------RVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKE-M- 723 (1163)
T ss_pred CceEEEEEEEeecccCCC---C-HHH-------HHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhC-c-
Confidence 445599999999994221 1 111 123344455668888877 9999985432211111222333332 2
Q ss_pred CCCCceEEEecCCCCCCCC
Q psy2930 88 TPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~ 106 (293)
+. -++++||||+.++
T Consensus 724 ---g~-d~~~~GNHEfd~g 738 (1163)
T PRK09419 724 ---GY-DASTFGNHEFDWG 738 (1163)
T ss_pred ---CC-CEEEecccccccC
Confidence 22 2679999999764
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-08 Score=84.00 Aligned_cols=83 Identities=19% Similarity=0.095 Sum_probs=52.3
Q ss_pred EEEEEecCCcCCCCC----CchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 14 KAIFIADTHLLGPFR----GHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 14 ri~~iSD~H~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
+.+++||+|+|.... +...... +.....+.+.+.+++.+||.|+++||+++..... ..+....+.+++ +
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~-~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~--~~~~~~~~~l~~-~--- 88 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGF-QFREIIERALSIADKYGIEALIINGDLKHEFKKG--LEWRFIREFIEV-T--- 88 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChh-HHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh--HHHHHHHHHHHh-c---
Confidence 689999999986431 1111111 1223555667777788999999999999865421 233332223332 2
Q ss_pred CCceEEEecCCCCCC
Q psy2930 90 DGTELHVVPGNHDMG 104 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~ 104 (293)
..+++.|+||||..
T Consensus 89 -~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 -FRDLILIRGNHDAL 102 (225)
T ss_pred -CCcEEEECCCCCCc
Confidence 35899999999964
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6e-08 Score=81.00 Aligned_cols=64 Identities=19% Similarity=0.294 Sum_probs=39.7
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-hcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-LHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|++++||+|.. ++. + +++.+.+. ..+.|.++++||+++.|... . +.++.+.+ .
T Consensus 16 ri~visDiHg~-------~~~------l-~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--~---~~l~~l~~-------~ 69 (218)
T PRK09968 16 HIWVVGDIHGE-------YQL------L-QSRLHQLSFCPETDLLISVGDNIDRGPES--L---NVLRLLNQ-------P 69 (218)
T ss_pred eEEEEEeccCC-------HHH------H-HHHHHhcCCCCCCCEEEECCCCcCCCcCH--H---HHHHHHhh-------C
Confidence 89999999971 111 1 11222222 24689999999999988632 1 22222221 1
Q ss_pred eEEEecCCCCC
Q psy2930 93 ELHVVPGNHDM 103 (293)
Q Consensus 93 ~~~~v~GNHD~ 103 (293)
.+++|.||||.
T Consensus 70 ~~~~v~GNHE~ 80 (218)
T PRK09968 70 WFISVKGNHEA 80 (218)
T ss_pred CcEEEECchHH
Confidence 46899999996
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-07 Score=78.82 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=39.8
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
.|+.++||+|.... ...++.+.+.. .+.|.++++||+++.|+.+ . +.++.+.+ .
T Consensus 17 ~ri~vigDIHG~~~--------------~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s--~---~vl~~l~~-----~- 71 (218)
T PRK11439 17 RHIWLVGDIHGCFE--------------QLMRKLRHCRFDPWRDLLISVGDLIDRGPQS--L---RCLQLLEE-----H- 71 (218)
T ss_pred CeEEEEEcccCCHH--------------HHHHHHHhcCCCcccCEEEEcCcccCCCcCH--H---HHHHHHHc-----C-
Confidence 48999999999111 11112222222 2578999999999988732 1 22222322 1
Q ss_pred ceEEEecCCCCC
Q psy2930 92 TELHVVPGNHDM 103 (293)
Q Consensus 92 ~~~~~v~GNHD~ 103 (293)
.+++|.||||.
T Consensus 72 -~~~~v~GNHE~ 82 (218)
T PRK11439 72 -WVRAVRGNHEQ 82 (218)
T ss_pred -CceEeeCchHH
Confidence 35789999996
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.1e-06 Score=74.65 Aligned_cols=87 Identities=11% Similarity=0.038 Sum_probs=43.2
Q ss_pred eEEEEEecCCcCCCCCCc--------hhHHHHhHHHHHHHHHHHHHhcCCCE-EEEcCccCCCCccCChhhHHHHHHHHH
Q psy2930 13 IKAIFIADTHLLGPFRGH--------WFDKLRREWQMYKTFQTAVALHQPEH-IFVLGDLLDEGQYVGGEDFDNYVRRFY 83 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~pd~-vi~~GDl~~~~~~~~~~~~~~~~~~~~ 83 (293)
++|++++|+|..-..... ...... ......++.+.+++..++. ++.+||.+......+...-....+.+.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~g-G~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln 79 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYG-GFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMN 79 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccC-CHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHH
Confidence 589999999975321110 000000 0111223444444556774 555999998654322111122222232
Q ss_pred hhhcCCCCceEEEecCCCCCCCC
Q psy2930 84 SLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 84 ~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
. .+.. ++++||||+.++
T Consensus 80 ~-----~g~D-~~~lGNHefd~G 96 (281)
T cd07409 80 L-----LGYD-AMTLGNHEFDDG 96 (281)
T ss_pred h-----cCCC-EEEeccccccCC
Confidence 2 2344 566799999764
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.4e-08 Score=80.44 Aligned_cols=88 Identities=25% Similarity=0.389 Sum_probs=61.0
Q ss_pred eEEEEEecCCcCCCCC----CchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 13 IKAIFIADTHLLGPFR----GHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
-+.+++||+|+|-... +..+..+. ...+.+.+.+.+...+|+.||++||+.+........++.. ..+|.+.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~-~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~-~~~f~~~~~- 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQ-TDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEE-VREFLELLD- 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchh-HHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHH-HHHHHHHhc-
Confidence 4789999999985431 22222222 2345666777888999999999999999866544444444 566666663
Q ss_pred CCCceEEEecCCCCCCC
Q psy2930 89 PDGTELHVVPGNHDMGF 105 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~ 105 (293)
. ..++++.||||-+.
T Consensus 97 -~-~evi~i~GNHD~~i 111 (235)
T COG1407 97 -E-REVIIIRGNHDNGI 111 (235)
T ss_pred -c-CcEEEEeccCCCcc
Confidence 2 25999999999863
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.7e-06 Score=72.23 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=44.1
Q ss_pred CceEEEEEecCCcCCCCC---CchhHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChh--hHHHHHHHHHh
Q psy2930 11 NNIKAIFIADTHLLGPFR---GHWFDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGE--DFDNYVRRFYS 84 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~--~~~~~~~~~~~ 84 (293)
.+++|++++|+|.--... ......+.+-..+.+.+.+..++..++ +++..||.+++.....-. .-....+.+ .
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~m-N 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIF-R 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHH-H
Confidence 458999999999532110 000001111011223333333334565 567799999965432211 122222222 2
Q ss_pred hhcCCCCceEEEecCCCCCCC
Q psy2930 85 LFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~ 105 (293)
.+ +.. ++++||||+.+
T Consensus 83 ~m----gyD-a~tlGNHEFd~ 98 (282)
T cd07407 83 MM----PYD-LLTIGNHELYN 98 (282)
T ss_pred hc----CCc-EEeecccccCc
Confidence 22 211 89999999964
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.4e-06 Score=66.61 Aligned_cols=81 Identities=22% Similarity=0.267 Sum_probs=47.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHH-HHHHHHhcCC-CEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKT-FQTAVALHQP-EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p-d~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
..+-++||+|++....-..- .+..-..+... +..+.+..+| |.|.++||+..+.+. +..+..+.+.+ .
T Consensus 4 ~mmyfisDtHfgh~nvi~~~-pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~------~~~a~~IlerL---n 73 (186)
T COG4186 4 TMMYFISDTHFGHKNVISMR-PFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR------ERAAGLILERL---N 73 (186)
T ss_pred eEEEEecccccCCcceeecC-CCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch------hhHHHHHHHHc---C
Confidence 35788999999977531110 01111112222 3334445556 889999999986542 22344455555 3
Q ss_pred CceEEEecCCCCCC
Q psy2930 91 GTELHVVPGNHDMG 104 (293)
Q Consensus 91 ~~~~~~v~GNHD~~ 104 (293)
|.+ +.|+||||-.
T Consensus 74 Grk-hlv~GNhDk~ 86 (186)
T COG4186 74 GRK-HLVPGNHDKC 86 (186)
T ss_pred CcE-EEeeCCCCCC
Confidence 544 9999999963
|
|
| >KOG2310|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=4e-06 Score=76.13 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=62.2
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh-cC
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF-ST 88 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~-~~ 88 (293)
+..+||++.||.|+|-....... -...+...+.+..+....+.|+|+..|||++...++ .+.+...++-|+.-+ +.
T Consensus 11 entirILVaTD~HlGY~EkD~vr--g~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPS-r~~L~~~i~lLRryClgd 87 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVR--GDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPS-RKTLHRCLELLRRYCLGD 87 (646)
T ss_pred ccceEEEEeecCccccccCCccc--ccchHHHHHHHHHHHHhcCCcEEEecCcccccCCcc-HHHHHHHHHHHHHHccCC
Confidence 46799999999999876543211 011334556677777788999999999999976643 233333344444321 00
Q ss_pred ------------------------------CCCceEEEecCCCCCCC
Q psy2930 89 ------------------------------PDGTELHVVPGNHDMGF 105 (293)
Q Consensus 89 ------------------------------~~~~~~~~v~GNHD~~~ 105 (293)
.-++||+.|-||||-.-
T Consensus 88 kP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpS 134 (646)
T KOG2310|consen 88 KPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPS 134 (646)
T ss_pred CceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCc
Confidence 12899999999999743
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-05 Score=69.99 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=41.8
Q ss_pred eEEEEEecCCcCCCCCCc----hhHHHHhHHHHHHHHHHHHHhcCC-CEEEEcCccCCCCcc-CChhhHHHHHHHHHhhh
Q psy2930 13 IKAIFIADTHLLGPFRGH----WFDKLRREWQMYKTFQTAVALHQP-EHIFVLGDLLDEGQY-VGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p-d~vi~~GDl~~~~~~-~~~~~~~~~~~~~~~~~ 86 (293)
++|++++|+|..-..... ...-+. ++ ..+.+.+++..+ .+++.+||++..... .....-...++.+..
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~a---rl-~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~-- 74 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAA---YL-AAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNA-- 74 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHH---HH-HHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHh--
Confidence 589999999953221110 000011 12 223333444455 489999999974432 110000122233322
Q ss_pred cCCCCceEEEecCCCCCCCC
Q psy2930 87 STPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+.. ++++||||+.++
T Consensus 75 ---~g~D-a~t~GNHefd~G 90 (288)
T cd07412 75 ---MGVD-ASAVGNHEFDEG 90 (288)
T ss_pred ---hCCe-eeeecccccccC
Confidence 2333 578899998753
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.9e-06 Score=71.91 Aligned_cols=84 Identities=20% Similarity=0.100 Sum_probs=41.4
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-----cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-----HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
++|++++|+|..-........-+.+ + .++.+.+++ ...-+++.+||++.+........-...++.+ ..+
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar---~-a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~-n~~- 74 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAA---Q-KTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGM-NLV- 74 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHH---H-HHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHH-Hhh-
Confidence 5799999999854221110000111 1 122222222 2345899999999743321111112222222 322
Q ss_pred CCCCceEEEecCCCCCCCC
Q psy2930 88 TPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~ 106 (293)
+.- ++++||||+.++
T Consensus 75 ---g~D-a~~~GNHEfD~G 89 (285)
T cd07405 75 ---GYD-AMAVGNHEFDNP 89 (285)
T ss_pred ---CCc-EEeecccccccC
Confidence 333 567799999764
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.1e-07 Score=77.38 Aligned_cols=70 Identities=24% Similarity=0.402 Sum_probs=44.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-c-CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-H-QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
||+++|||+|. .. +. + ..+.+.+.. . ..|.|+++||+++.|..+ .+.++.+.+.. ..
T Consensus 1 m~~~~IsDIHG-~~------~~------l-~~ll~~i~~~~~~~d~li~lGD~iDrG~~s-----~~v~~~l~~~~--~~ 59 (235)
T PHA02239 1 MAIYVVPDIHG-EY------QK------L-LTIMDKINNERKPEETIVFLGDYVDRGKRS-----KDVVNYIFDLM--SN 59 (235)
T ss_pred CeEEEEECCCC-CH------HH------H-HHHHHHHhhcCCCCCEEEEecCcCCCCCCh-----HHHHHHHHHHh--hc
Confidence 68999999995 21 11 2 222333332 2 359999999999987632 23344454443 23
Q ss_pred CceEEEecCCCCC
Q psy2930 91 GTELHVVPGNHDM 103 (293)
Q Consensus 91 ~~~~~~v~GNHD~ 103 (293)
+.++++++||||.
T Consensus 60 ~~~~~~l~GNHE~ 72 (235)
T PHA02239 60 DDNVVTLLGNHDD 72 (235)
T ss_pred CCCeEEEECCcHH
Confidence 4578999999996
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.7e-06 Score=71.70 Aligned_cols=84 Identities=11% Similarity=0.143 Sum_probs=41.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChh--------hHHHHHHHHH
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGE--------DFDNYVRRFY 83 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~--------~~~~~~~~~~ 83 (293)
++|++++|+|......+... ++. .+.+.+.+..++ .+..+++.+||++..+...+.. .-.... .++
T Consensus 1 l~IlhtnD~Hg~~~~~gg~a-r~a---~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i-~~m 75 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAP-NFS---ALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADI-LIL 75 (313)
T ss_pred CeEEEecccccCccccCCHH-HHH---HHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHH-HHH
Confidence 57999999998543222211 111 111111111111 2345899999999865422100 001112 222
Q ss_pred hhhcCCCCceEEEecCCCCCCCC
Q psy2930 84 SLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 84 ~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
..+ +.. ++++||||+.++
T Consensus 76 N~~----g~D-a~tlGNHEFD~G 93 (313)
T cd08162 76 NAL----GVQ-AIALGNHEFDLG 93 (313)
T ss_pred hcc----CCc-EEeccccccccC
Confidence 222 222 789999999764
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.7e-07 Score=77.47 Aligned_cols=64 Identities=23% Similarity=0.312 Sum_probs=42.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh----cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL----HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
|++++|||+|..- .++.+.+++ .++|.++++||+++.|+.+ .+.++.+.+
T Consensus 1 M~~~vIGDIHG~~-----------------~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s-----~~vl~~l~~---- 54 (275)
T PRK00166 1 MATYAIGDIQGCY-----------------DELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS-----LEVLRFVKS---- 54 (275)
T ss_pred CcEEEEEccCCCH-----------------HHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH-----HHHHHHHHh----
Confidence 6899999999711 112223332 3689999999999988632 222333333
Q ss_pred CCCceEEEecCCCCC
Q psy2930 89 PDGTELHVVPGNHDM 103 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~ 103 (293)
.+.++++|.||||.
T Consensus 55 -l~~~~~~VlGNHD~ 68 (275)
T PRK00166 55 -LGDSAVTVLGNHDL 68 (275)
T ss_pred -cCCCeEEEecChhH
Confidence 23468999999997
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.6e-05 Score=74.09 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=27.1
Q ss_pred CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 53 ~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
..-+++.+||.+......+...-....+ +...+ +. =++++||||+.++
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~-~~N~~----g~-Da~~lGNHEFd~G 96 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAA-LMNAA----GF-DFFTLGNHEFDAG 96 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHH-HHhcc----CC-CEEEeccccccCC
Confidence 4468889999998544222111111222 22222 22 2889999999764
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.35 E-value=3e-05 Score=73.82 Aligned_cols=89 Identities=16% Similarity=0.123 Sum_probs=43.6
Q ss_pred CCCceEEEEEecCCcCCCCCC--c-hhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHh
Q psy2930 9 SINNIKAIFIADTHLLGPFRG--H-WFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYS 84 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~ 84 (293)
...+++|++++|+|..-.... . -+.++. .+.+...+..++ ...-+++.+||.+.+.....-..-...++.+ .
T Consensus 31 ~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a---~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~m-N 106 (551)
T PRK09558 31 KTYKITILHTNDHHGHFWRNEYGEYGLAAQK---TLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM-N 106 (551)
T ss_pred CceEEEEEEecccCCCccccccCCccHHHHH---HHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHH-h
Confidence 345699999999998543211 0 011111 111111111111 2346789999998854321111111112222 2
Q ss_pred hhcCCCCceEEEecCCCCCCCC
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+ +.. ++++||||+.++
T Consensus 107 ~~----g~D-a~tlGNHEFD~G 123 (551)
T PRK09558 107 LI----GYD-AMAVGNHEFDNP 123 (551)
T ss_pred cC----CCC-EEcccccccCcC
Confidence 22 333 667799999764
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-06 Score=72.66 Aligned_cols=42 Identities=31% Similarity=0.491 Sum_probs=28.6
Q ss_pred CCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCC
Q psy2930 54 PEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDM 103 (293)
Q Consensus 54 pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 103 (293)
.|.++++||+++.|.. . .+.++.+.++. . .-.++++.||||.
T Consensus 38 ~d~lv~lGDlIDrG~~--s---~evl~~l~~l~--~-~~~~~~v~GNHE~ 79 (234)
T cd07423 38 GRRAVFVGDLVDRGPD--S---PEVLRLVMSMV--A-AGAALCVPGNHDN 79 (234)
T ss_pred CCEEEEECCccCCCCC--H---HHHHHHHHHHh--h-CCcEEEEECCcHH
Confidence 6899999999998863 2 22334444432 1 1257899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.4e-05 Score=72.12 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=48.6
Q ss_pred CCCceEEEEEecCCcCCCCCCc--hhHHHHhHHHHHHHHHHHHHhc-CCCEEEEcCccCCCCccCCh-hhHHHHHHHHHh
Q psy2930 9 SINNIKAIFIADTHLLGPFRGH--WFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGG-EDFDNYVRRFYS 84 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~-~~~~~~~~~~~~ 84 (293)
..-+++|++++|+|..-..... .... .-.+....++.+.+++. +..++|.+||++++....+. ..-....+ ++.
T Consensus 23 ~~~~l~ilhtnD~H~~l~~~~~~~~~~~-~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~-~mN 100 (517)
T COG0737 23 ETVKLTILHTNDLHGHLEPYDYDDDGDT-DGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVD-LLN 100 (517)
T ss_pred CceeEEEEEeccccccceeccccccCcc-cccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHH-HHh
Confidence 3456999999999986541100 0000 00112223344444444 55789999999996443221 11122222 223
Q ss_pred hhcCCCCceEEEecCCCCCCCC
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+ +. =+++.|||++.++
T Consensus 101 ~m----~y-Da~tiGNHEFd~g 117 (517)
T COG0737 101 AL----GY-DAMTLGNHEFDYG 117 (517)
T ss_pred hc----CC-cEEeecccccccC
Confidence 23 11 1889999999764
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.3e-05 Score=66.77 Aligned_cols=72 Identities=18% Similarity=0.265 Sum_probs=44.6
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCce
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTE 93 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (293)
||+++.|+ +|.+... .+.+.+.+..++.++|++|..||....+...+ ...++.+.. .++-
T Consensus 1 ~ilfigdi-~g~~G~~----------~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~----~~~~~~L~~-----~G~D 60 (255)
T cd07382 1 KILFIGDI-VGKPGRK----------AVKEHLPKLKKEYKIDFVIANGENAAGGKGIT----PKIAKELLS-----AGVD 60 (255)
T ss_pred CEEEEEeC-CCHHHHH----------HHHHHHHHHHHHCCCCEEEECCccccCCCCCC----HHHHHHHHh-----cCCC
Confidence 58889998 4444221 23344555556679999999999988764333 222333333 3445
Q ss_pred EEEecCCCCCCCC
Q psy2930 94 LHVVPGNHDMGFH 106 (293)
Q Consensus 94 ~~~v~GNHD~~~~ 106 (293)
++..|||++...
T Consensus 61 -~iTlGNH~fD~g 72 (255)
T cd07382 61 -VITMGNHTWDKK 72 (255)
T ss_pred -EEEecccccCcc
Confidence 555599988654
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.6e-05 Score=74.04 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=44.2
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHh--HHHHHHHHHHHHHhc-CCCEEEEcCccCCCCccCChh--------hHHHHHH
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRR--EWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGE--------DFDNYVR 80 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~~--------~~~~~~~ 80 (293)
.++|++++|+|.--.....+.+.... ...-..++.+.+++. ..-+++..||++.+....+-. .....++
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~ 81 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYK 81 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHH
Confidence 48999999999864322111100000 000112233333333 446899999999965422100 0011222
Q ss_pred HHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 81 RFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 81 ~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+. .+ +.- .+++||||+.++
T Consensus 82 ~mN-~l----gyD-a~tlGNHEFd~G 101 (626)
T TIGR01390 82 AMN-LL----KYD-VGNLGNHEFNYG 101 (626)
T ss_pred HHh-hc----Ccc-EEeccccccccc
Confidence 232 22 222 789999999764
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.2e-05 Score=72.98 Aligned_cols=90 Identities=12% Similarity=0.108 Sum_probs=45.4
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHh--HHHHHHHHHHHHHhcCC-CEEEEcCccCCCCccCChh---------hHHHH
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRR--EWQMYKTFQTAVALHQP-EHIFVLGDLLDEGQYVGGE---------DFDNY 78 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p-d~vi~~GDl~~~~~~~~~~---------~~~~~ 78 (293)
-.++|++++|+|..-.....+.+.... ...-...+++.+++..+ -++|..||++.+....+-. .....
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred eEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 368999999999864322111110000 00011223333333333 5799999999964432100 00112
Q ss_pred HHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 79 VRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
++.+.. + +.- .+.+||||+.++
T Consensus 194 i~amN~-L----GyD-A~tLGNHEFDyG 215 (814)
T PRK11907 194 YAALEA-L----GFD-AGTLGNHEFNYG 215 (814)
T ss_pred HHHHhc-c----CCC-EEEechhhcccC
Confidence 333322 2 222 789999999764
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.5e-05 Score=78.00 Aligned_cols=90 Identities=18% Similarity=0.173 Sum_probs=44.7
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHh--HHHHHHHHHHHHHhcCCCEEEE-cCccCCCCccCC---------hhhHHHH
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRR--EWQMYKTFQTAVALHQPEHIFV-LGDLLDEGQYVG---------GEDFDNY 78 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~pd~vi~-~GDl~~~~~~~~---------~~~~~~~ 78 (293)
..++|++++|+|..-.....+.++... ...-...+.+.+++..++.+++ +||++.+..... .......
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred eEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHH
Confidence 359999999999753221100000000 0011223444445556766555 999999653110 0001122
Q ss_pred HHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 79 VRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
++.+.. + +.- ++++||||+.++
T Consensus 120 i~~mN~-l----gyD-a~~lGNHEFd~G 141 (1163)
T PRK09419 120 IKAMNA-L----GYD-AGTLGNHEFNYG 141 (1163)
T ss_pred HHHHhh-c----Ccc-EEeecccccccC
Confidence 332322 2 222 778999999764
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.8e-05 Score=72.38 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=45.9
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHh--HHHHHHHHHHHHHhc-CCCEEEEcCccCCCCccCChhhH--------HHH
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRR--EWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGEDF--------DNY 78 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~~~~--------~~~ 78 (293)
...++|++.+|+|..-.....+.+.... ...-..++.+.+++. ..-+++..||++.+....+-... ...
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 4579999999999854322111110000 001112233333433 34688999999996442110000 112
Q ss_pred HHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 79 VRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
++.+.. + +.- .+++||||+.++
T Consensus 103 i~amN~-l----gyD-a~tlGNHEFd~G 124 (649)
T PRK09420 103 YKAMNT-L----DYD-VGNLGNHEFNYG 124 (649)
T ss_pred HHHHHh-c----CCc-EEeccchhhhcC
Confidence 333332 2 221 889999999764
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.0002 Score=70.10 Aligned_cols=58 Identities=16% Similarity=0.075 Sum_probs=30.9
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHh--HHHHHHHHHHHHHhc-CCCEEEEcCccCCCCc
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRR--EWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQ 68 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~ 68 (293)
-.++|++.+|+|..-.....+.+.... ...-...+++.+++. .--++|..||++.+..
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGsp 98 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTP 98 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCch
Confidence 469999999999864322111110000 000112233333333 3458999999998543
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.2e-06 Score=69.41 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=28.7
Q ss_pred CCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCC
Q psy2930 54 PEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDM 103 (293)
Q Consensus 54 pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 103 (293)
-|.++++||+++.|+.+ . +.++.+.++. . .-.++++.||||.
T Consensus 37 ~d~li~lGDliDRGp~S--~---~vl~~~~~~~--~-~~~~~~l~GNHE~ 78 (245)
T PRK13625 37 QRKLAFVGDLTDRGPHS--L---RMIEIVWELV--E-KKAAYYVPGNHCN 78 (245)
T ss_pred CCEEEEECcccCCCcCh--H---HHHHHHHHHh--h-CCCEEEEeCccHH
Confidence 47999999999988632 1 2233344443 1 2368999999985
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.1e-05 Score=66.87 Aligned_cols=65 Identities=22% Similarity=0.334 Sum_probs=40.0
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
||+++||+|. .. .. + .++.+.+.. .++|.++++||+++.|... .+.++.+. . .
T Consensus 2 ri~~isDiHg-~~------~~------l-~~~l~~~~~~~~~d~~~~~GD~v~~g~~~-----~~~~~~l~-----~--~ 55 (207)
T cd07424 2 RDFVVGDIHG-HY------SL------L-QKALDAVGFDPARDRLISVGDLIDRGPES-----LACLELLL-----E--P 55 (207)
T ss_pred CEEEEECCCC-CH------HH------H-HHHHHHcCCCCCCCEEEEeCCcccCCCCH-----HHHHHHHh-----c--C
Confidence 7999999996 11 11 1 112222222 3689999999999987632 12222222 1 2
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
++++|.||||..
T Consensus 56 ~~~~v~GNhe~~ 67 (207)
T cd07424 56 WFHAVRGNHEQM 67 (207)
T ss_pred CEEEeECCChHH
Confidence 579999999963
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.03 E-value=7.6e-05 Score=63.80 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=45.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++.|+ +|.+.. ..+.+.+.+..++.++|++|..||....|...+ ...++.+.+ .|+
T Consensus 1 m~ilfiGDi-~G~~Gr----------~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~----~~~~~~L~~-----~Gv 60 (266)
T TIGR00282 1 IKFLFIGDV-YGKAGR----------KIVKNNLPQLKSKYQADLVIANGENTTHGKGLT----LKIYEFLKQ-----SGV 60 (266)
T ss_pred CeEEEEEec-CCHHHH----------HHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCC----HHHHHHHHh-----cCC
Confidence 789999999 433321 123344445555678999999999997664333 222333433 466
Q ss_pred eEEEecCCCCCCCC
Q psy2930 93 ELHVVPGNHDMGFH 106 (293)
Q Consensus 93 ~~~~v~GNHD~~~~ 106 (293)
.++.+ |||.+...
T Consensus 61 DviT~-GNH~~Dkg 73 (266)
T TIGR00282 61 NYITM-GNHTWFQK 73 (266)
T ss_pred CEEEc-cchhccCc
Confidence 65555 99998653
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.03 E-value=1e-05 Score=68.98 Aligned_cols=42 Identities=31% Similarity=0.533 Sum_probs=29.5
Q ss_pred CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCC
Q psy2930 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 53 ~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~ 104 (293)
+.|.++++||+++.|+.+ .+.++.+.++ +..+++|.||||..
T Consensus 26 ~~D~Li~lGDlVdRGp~s-----~evl~~l~~l-----~~~v~~VlGNHD~~ 67 (257)
T cd07422 26 AKDRLWLVGDLVNRGPDS-----LETLRFVKSL-----GDSAKTVLGNHDLH 67 (257)
T ss_pred CCCEEEEecCcCCCCcCH-----HHHHHHHHhc-----CCCeEEEcCCchHH
Confidence 579999999999988632 2223333332 23688999999973
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.1e-05 Score=58.82 Aligned_cols=28 Identities=18% Similarity=0.119 Sum_probs=22.9
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
.......+++++.+|+++||||.|.+..
T Consensus 97 ~GS~~i~~l~~~lkPrYhf~gh~~~fye 124 (150)
T cd07380 97 CGSDLIAELAKKLKPRYHFAGLEGVFYE 124 (150)
T ss_pred CCCHHHHHHHHHcCCCeEeecCCCceEe
Confidence 3445778899999999999999997544
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.2e-05 Score=65.80 Aligned_cols=43 Identities=28% Similarity=0.516 Sum_probs=29.8
Q ss_pred CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCC
Q psy2930 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDM 103 (293)
Q Consensus 53 ~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 103 (293)
..|.+|++||+++.|+.+ .+.++.+.++. ..+ .++++.||||.
T Consensus 33 ~~d~lvflGD~IDRGp~S-----~~vl~~l~~l~--~~~-~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLIDRGPEI-----RELLEIVKSMV--DAG-HALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCcccCCCCCH-----HHHHHHHHHhh--cCC-CEEEEEccCcH
Confidence 368999999999988732 22344454443 122 68999999996
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.7e-05 Score=67.99 Aligned_cols=64 Identities=27% Similarity=0.456 Sum_probs=40.8
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh----cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL----HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
|++.+|||+|.- + +++.+.+++ .+.|.++++||+++.|+.+ .+.++.+.++
T Consensus 1 m~~YvIGDIHGc-------~----------daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s-----levL~~l~~l--- 55 (279)
T TIGR00668 1 MATYLIGDLHGC-------Y----------DELQALLERVEFDPGQDTLWLTGDLVARGPGS-----LEVLRYVKSL--- 55 (279)
T ss_pred CcEEEEEcccCC-------H----------HHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH-----HHHHHHHHhc---
Confidence 568899999981 1 122233333 3569999999999988732 1223333332
Q ss_pred CCCceEEEecCCCCC
Q psy2930 89 PDGTELHVVPGNHDM 103 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~ 103 (293)
+..+++|.||||.
T Consensus 56 --~~~~~~VlGNHD~ 68 (279)
T TIGR00668 56 --GDAVRLVLGNHDL 68 (279)
T ss_pred --CCCeEEEEChhHH
Confidence 2246799999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.9e-05 Score=65.97 Aligned_cols=47 Identities=23% Similarity=0.315 Sum_probs=28.9
Q ss_pred CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCC
Q psy2930 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 53 ~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~ 104 (293)
..+.+|++||+++.|.. ..+. ++.+...........+++++||||..
T Consensus 34 ~~~~iVfLGDyVDRGPd--S~eV---ld~L~~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 34 ASALVIFLGDYCDRGPE--TRKV---IDFLISLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred CCcEEEEeCCcCCCCCC--HHHH---HHHHHHhhhcccccceEEEecCChHH
Confidence 35789999999998863 2223 33333322101122578999999963
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.7e-05 Score=64.43 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=32.9
Q ss_pred HHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCC
Q psy2930 49 VALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 49 ~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~ 104 (293)
+...++|.+|++||+++.|... ...++.+.++.. ...+++++.||||..
T Consensus 20 ~~~~~~d~li~lGD~vdrg~~~-----~~~l~~l~~~~~--~~~~~~~l~GNHe~~ 68 (225)
T cd00144 20 IGFPPNDKLIFLGDYVDRGPDS-----VEVIDLLLALKI--LPDNVILLRGNHEDM 68 (225)
T ss_pred hCCCCCCEEEEECCEeCCCCCc-----HHHHHHHHHhcC--CCCcEEEEccCchhh
Confidence 3335789999999999987632 233333443321 145799999999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0015 Score=56.33 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=41.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
.++++++|+|..-. . +.+. .+.......+.++++||+++.|... .+.......+. + ..+-
T Consensus 28 ~~i~vvGDiHG~~~-------~------l~~l-l~~~~~~~~~~~vfLGD~VDrG~~s--~e~l~~l~~lk-~---~~p~ 87 (271)
T smart00156 28 APVTVCGDIHGQFD-------D------LLRL-FDLNGPPPDTNYVFLGDYVDRGPFS--IEVILLLFALK-I---LYPN 87 (271)
T ss_pred CCEEEEEeCcCCHH-------H------HHHH-HHHcCCCCCceEEEeCCccCCCCCh--HHHHHHHHHHH-h---cCCC
Confidence 47899999997111 0 1111 1222234668899999999988632 12222122221 1 1234
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
.++.+.||||..
T Consensus 88 ~v~llrGNHE~~ 99 (271)
T smart00156 88 RVVLLRGNHESR 99 (271)
T ss_pred CEEEEeccccHH
Confidence 689999999983
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG3947|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00065 Score=57.14 Aligned_cols=72 Identities=22% Similarity=0.299 Sum_probs=48.2
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhc
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
......|++.+||+|-...... +-..-|+++.+||.+..|. .++ ...+.+.++
T Consensus 57 ~~~~~~r~VcisdtH~~~~~i~--------------------~~p~gDvlihagdfT~~g~---~~e----v~~fn~~~g 109 (305)
T KOG3947|consen 57 VGPGYARFVCISDTHELTFDIN--------------------DIPDGDVLIHAGDFTNLGL---PEE----VIKFNEWLG 109 (305)
T ss_pred CCCCceEEEEecCcccccCccc--------------------cCCCCceEEeccCCccccC---HHH----HHhhhHHhc
Confidence 5556689999999998433221 1256799999999999775 222 344444443
Q ss_pred CCCCceEEEecCCCCCCCC
Q psy2930 88 TPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~ 106 (293)
.-...-.++|.|||+++++
T Consensus 110 slph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 110 SLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred cCcceeeEEEeeccceeec
Confidence 2223335899999999875
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0063 Score=53.40 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=21.2
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHN 249 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~ 249 (293)
.+.....+.|++.+.++++=||.=.
T Consensus 220 fG~~~~~~Fl~~n~l~~iiR~He~~ 244 (305)
T cd07416 220 YSYRAVCEFLQKNNLLSIIRAHEAQ 244 (305)
T ss_pred cCHHHHHHHHHHcCCeEEEEecccc
Confidence 3566889999999999999999844
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0049 Score=54.31 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=21.8
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.+.+...+.|++.+.++++-||.=..
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~~ 256 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVKD 256 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCcccc
Confidence 35668889999999999999998543
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.011 Score=52.01 Aligned_cols=23 Identities=13% Similarity=0.326 Sum_probs=20.4
Q ss_pred cCHHHHHHHHhhcCccEEEecCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHT 247 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~ 247 (293)
.+.+...+.+++.+.++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 45678899999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00011 Score=61.04 Aligned_cols=116 Identities=15% Similarity=0.198 Sum_probs=57.0
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-hcCCCEEEEcCccCCCCccCC--------hhhHHHHHHHHHhh
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-LHQPEHIFVLGDLLDEGQYVG--------GEDFDNYVRRFYSL 85 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pd~vi~~GDl~~~~~~~~--------~~~~~~~~~~~~~~ 85 (293)
|+++||+|++..... ++ ..+.+...+. ..+|+.+|++|++++...... ..........+.+.
T Consensus 1 Iv~~Sg~~~~~~~~~--~~-------~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSDNLS--LE-------PLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT-HH--HH-------HHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCCHhH--HH-------HHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 689999999644221 11 2222333333 667999999999999533110 01111122223322
Q ss_pred hc-CCCCceEEEecCCCCCCCC-CCCC----chhHHHHHH---HhCCCCcceEEeCCEEEEEE
Q psy2930 86 FS-TPDGTELHVVPGNHDMGFH-YRLH----PYLNDRFSR---AFNSSMVKLLSIKGSYFVLI 139 (293)
Q Consensus 86 ~~-~~~~~~~~~v~GNHD~~~~-~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~i~l 139 (293)
+. ....+++++|||+||.... .-.+ ........+ ..-.+++..+.++|..|++.
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~ 134 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVT 134 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-
T ss_pred HhhcccccEEEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEE
Confidence 22 1257899999999998643 1111 111122222 12223578899999999886
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0064 Score=53.03 Aligned_cols=26 Identities=15% Similarity=0.333 Sum_probs=22.0
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.++....+.+++.+.++++=||.=..
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~~ 247 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVME 247 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCcccc
Confidence 35678899999999999999998553
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0038 Score=54.47 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=22.0
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.+.....+.|++.+.++++-||.=..
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~~ 245 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVVE 245 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCcccc
Confidence 35678899999999999999998553
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.014 Score=50.63 Aligned_cols=26 Identities=8% Similarity=0.064 Sum_probs=21.8
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCC
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHN 249 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~ 249 (293)
..+.....+.|++.+.++++=||.=.
T Consensus 211 ~fg~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 211 LFGQDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred ccCHHHHHHHHHHCCCeEEEEcCccc
Confidence 34567889999999999999999954
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.037 Score=49.76 Aligned_cols=24 Identities=25% Similarity=0.382 Sum_probs=21.0
Q ss_pred ccCHHHHHHHHhhcCccEEEecCC
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHT 247 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~ 247 (293)
..+.+...+.|++.+.++++=||.
T Consensus 270 ~FG~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 270 LWGPDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCC
Confidence 345678899999999999999999
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.021 Score=50.32 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=22.4
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
..++....+.|++.+.++++=||.=..
T Consensus 228 ~FG~~~~~~Fl~~n~l~~IiR~Hq~v~ 254 (320)
T PTZ00480 228 VFSQEIVQVFLKKHELDLICRAHQVVE 254 (320)
T ss_pred ccCHHHHHHHHHhCCCcEEEEcCcccc
Confidence 345678899999999999999998553
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.089 Score=46.43 Aligned_cols=26 Identities=19% Similarity=0.252 Sum_probs=21.7
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCC
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHN 249 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~ 249 (293)
..+++...+.|++.+.++++=||.=.
T Consensus 250 ~FG~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 250 YFGPDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhh
Confidence 34567889999999999999999843
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG2863|consensus | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00043 Score=60.24 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=25.2
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
-|+...+.++|++.+|..+|+.|.|.-..
T Consensus 204 ~LGSp~~~eLL~~LkP~yWfsAHLH~KFa 232 (456)
T KOG2863|consen 204 KLGSPALEELLEDLKPQYWFSAHLHVKFA 232 (456)
T ss_pred CcCChHHHHHHHHhCcchhhhhhHhhHHh
Confidence 45666789999999999999999998765
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0032 Score=53.28 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=102.4
Q ss_pred CEEEEcCccCCCCccCC--h---hhHHHHHHHHHhhhcC-CCCceEEEecCCCCCCCCCCCCc--hhHHHHHHHh----C
Q psy2930 55 EHIFVLGDLLDEGQYVG--G---EDFDNYVRRFYSLFST-PDGTELHVVPGNHDMGFHYRLHP--YLNDRFSRAF----N 122 (293)
Q Consensus 55 d~vi~~GDl~~~~~~~~--~---~~~~~~~~~~~~~~~~-~~~~~~~~v~GNHD~~~~~~~~~--~~~~~~~~~~----~ 122 (293)
=-++.-||+++.+.... + .++...-.++..-.+. .-..|||.-.||||+........ ..+...+.+. .
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 34788899999755211 1 2232222222221110 12579999999999964321110 1111122211 1
Q ss_pred C------C----------CcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCC
Q psy2930 123 S------S----------MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQ 186 (293)
Q Consensus 123 ~------~----------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (293)
+ + ..|++.+++++.+-+.... |.... -...-+-|++..|...-. ...|
T Consensus 208 ~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~--Gd~~~---ga~sslpwlk~dl~~~aa-----------dgrp 271 (392)
T COG5555 208 SDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFI--GDAEP---GANSSLPWLKVDLIYSAA-----------DGRP 271 (392)
T ss_pred cCcccCCCCCcccccccchheeccccceeEEEEeeec--cccCC---CccccCcceeccceeecc-----------CCCc
Confidence 1 1 1356778888777764322 22111 112235577777765432 6789
Q ss_pred CEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEecc
Q psy2930 187 PIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVP 266 (293)
Q Consensus 187 ~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~ 266 (293)
++++.|+---..+.....+ -.-.....+..-...|..-++..+...++-|++...|+||.|..-.....+ -.+
T Consensus 272 v~LfqhyGwdtfsteawdp-AsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~mayrr~------~ld 344 (392)
T COG5555 272 VYLFQHYGWDTFSTEAWDP-ASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAYRRY------DLD 344 (392)
T ss_pred eeehhhhCccceeccccCc-hhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceeeeec------Ccc
Confidence 9999998442111100000 000011111111111223344566777788899999999999986543222 222
Q ss_pred ceeccCCCCCceEEEEEecCCce
Q psy2930 267 SFSWRNKNNPSFLMGYVVENSSG 289 (293)
Q Consensus 267 s~~~~~~~~p~f~~~~~~~~~~~ 289 (293)
.+.....-..||.+..+....+.
T Consensus 345 ~fkpkaa~~Ggfav~rvt~~~mD 367 (392)
T COG5555 345 AFKPKAAVRGGFAVGRVTNPWMD 367 (392)
T ss_pred ccCccchhhcceeEEEecCchhh
Confidence 22222212235666665554443
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.013 Score=53.35 Aligned_cols=162 Identities=9% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCceEEEecCCCCCCCCC----CC-Cc-hhH-----------HHHHHHhCC-----C----CcceEEeCC-EEEEEEece
Q psy2930 90 DGTELHVVPGNHDMGFHY----RL-HP-YLN-----------DRFSRAFNS-----S----MVKLLSIKG-SYFVLINSM 142 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~----~~-~~-~~~-----------~~~~~~~~~-----~----~~~~~~~~~-~~~i~lds~ 142 (293)
.-+|+++.-=.|+..... .. .+ +.. +.|-++++- + -|..+..+. ..|.+||+.
T Consensus 231 A~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR 310 (522)
T COG3540 231 AAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTR 310 (522)
T ss_pred ccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehh
Confidence 578999999999984321 11 11 111 223332221 0 145667776 478889998
Q ss_pred ecc------CCCCC---------CCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCC-C
Q psy2930 143 ALE------GDGCF---------LCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSG-P 206 (293)
Q Consensus 143 ~~~------~~~~~---------~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~-~ 206 (293)
.|- +.... ..-.++.|.+||+++|..+ +..+.||.+-.|+.....+...- .
T Consensus 311 ~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S-------------katWnVia~q~~~~~~~~d~~~a~~ 377 (522)
T COG3540 311 SYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS-------------KATWNVIAQQMPLGLVVFDGSPATE 377 (522)
T ss_pred hhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc-------------chhhhhhhhhcceeEeecCCCcccc
Confidence 886 22211 1235689999999999986 45677777777774322111000 0
Q ss_pred CCchhhhhcccccccccccCHHHHHHHHhhcCcc--EEEecCCCCCcee-eccCC-------CeeEEecccee
Q psy2930 207 DSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR--LVIDGHTHNGCHK-YHAYG-------KVHEYTVPSFS 269 (293)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~--lvl~GH~H~~~~~-~~~~~-------~~~~~~~~s~~ 269 (293)
+.....+. +++ -...++.+..+++..++. ++|+|-.|..... ...++ ...++++.|++
T Consensus 378 ~~~a~~D~----wdG-y~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~Efv~tsi~ 445 (522)
T COG3540 378 GQEANADG----WDG-YPAGRERLLRFIADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWEFVSTSIN 445 (522)
T ss_pred CccccccC----cCC-CcccHHHHHHHHHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceeeEeeccCc
Confidence 00000000 112 245667788888888766 8999999987542 11221 34566666654
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.039 Score=46.66 Aligned_cols=21 Identities=29% Similarity=0.083 Sum_probs=16.3
Q ss_pred HHhhcCccEEEecCCCCCcee
Q psy2930 233 LLDYLNPRLVIDGHTHNGCHK 253 (293)
Q Consensus 233 ll~~~~~~lvl~GH~H~~~~~ 253 (293)
.+...++++|+.||.|..+..
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCe
Confidence 333458999999999998753
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.055 Score=45.31 Aligned_cols=93 Identities=12% Similarity=0.192 Sum_probs=55.5
Q ss_pred HhcCCCEEEEcCccCCCCc-------------------cCChhhHHHHHHHH------HhhhcCCCCceEEEecCCCCCC
Q psy2930 50 ALHQPEHIFVLGDLLDEGQ-------------------YVGGEDFDNYVRRF------YSLFSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 50 ~~~~pd~vi~~GDl~~~~~-------------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~v~GNHD~~ 104 (293)
.+.+||++|++||.+..-. ....+.+...+... ++. ...+|++++.-+||+.
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~---~~~~p~~~iwDDHDi~ 102 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRL---LAQVPTIGIWDDHDIG 102 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHH---hhcCCEEEeccccccc
Confidence 4679999999999887432 12223333332222 222 2578999999999996
Q ss_pred CCCCCC--------------chhHHHHHHHhCCC-----------CcceEEeCCE-EEEEEeceecc
Q psy2930 105 FHYRLH--------------PYLNDRFSRAFNSS-----------MVKLLSIKGS-YFVLINSMALE 145 (293)
Q Consensus 105 ~~~~~~--------------~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~i~lds~~~~ 145 (293)
.+.... ....+.|..+.+.. .++.+.++.. .|++||+..+-
T Consensus 103 ~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 103 DNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred cccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc
Confidence 532211 01123343333322 2456777886 99999998755
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.054 Score=45.18 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=46.4
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
||++++.|+ +|.+... .+.+.+.....+.++|+||+-|-....|.-...+- ++.+.+ .|+
T Consensus 1 mriLfiGDv-vGk~Gr~----------~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~----y~~l~~-----~G~ 60 (266)
T COG1692 1 MRILFIGDV-VGKPGRK----------AVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKI----YKELLE-----AGA 60 (266)
T ss_pred CeEEEEecc-cCcchHH----------HHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHH----HHHHHH-----hCC
Confidence 799999999 5455332 23344555556789999999999998877555222 333333 344
Q ss_pred eEEEecCCCCC
Q psy2930 93 ELHVVPGNHDM 103 (293)
Q Consensus 93 ~~~~v~GNHD~ 103 (293)
. ++.+|||=.
T Consensus 61 d-viT~GNH~w 70 (266)
T COG1692 61 D-VITLGNHTW 70 (266)
T ss_pred C-EEecccccc
Confidence 4 788999943
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.051 Score=46.00 Aligned_cols=20 Identities=25% Similarity=0.076 Sum_probs=15.7
Q ss_pred HhhcCccEEEecCCCCCcee
Q psy2930 234 LDYLNPRLVIDGHTHNGCHK 253 (293)
Q Consensus 234 l~~~~~~lvl~GH~H~~~~~ 253 (293)
+.+.++++|+.||.|..+..
T Consensus 201 l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHcCCCEEEcCCCCcCCce
Confidence 33358999999999988653
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.013 Score=51.40 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=21.8
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.+.....+.|++.+.++++=||.=..
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~~ 238 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLVM 238 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhhc
Confidence 45668899999999999999998553
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.037 Score=47.66 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHH-HHhcCCCEEEEcCccCCCCc---cCChhhHHHHHHHHH
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTA-VALHQPEHIFVLGDLLDEGQ---YVGGEDFDNYVRRFY 83 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pd~vi~~GDl~~~~~---~~~~~~~~~~~~~~~ 83 (293)
.++...+|+++||+|++.+.. ++.++. +...+... -+...|-++|++|+.+...- ......+++.++++.
T Consensus 23 ~~~~~~~~VilSDV~LD~p~t---l~~L~k---vf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La 96 (291)
T PTZ00235 23 KNDKRHNWIIMHDVYLDSPYT---FEVLDK---MLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLS 96 (291)
T ss_pred cCCCceEEEEEEeeccCCHHH---HHHHHH---HHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHH
Confidence 456668999999999965532 222221 22222110 11234999999999988631 112234666677776
Q ss_pred hh-hc----CCCCceEEEecCCCCCCC
Q psy2930 84 SL-FS----TPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 84 ~~-~~----~~~~~~~~~v~GNHD~~~ 105 (293)
.+ +. ......+++|||-+|-+.
T Consensus 97 ~llls~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 97 VMLISKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHHHhChHHHhcCeEEEECCCCCCCc
Confidence 52 31 124678999999999854
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.31 Score=41.48 Aligned_cols=147 Identities=15% Similarity=0.141 Sum_probs=75.0
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhHHHHHH----HhCC-------CCcceEEeCCEEEEEEeceeccCCCCCC------
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLNDRFSR----AFNS-------SMVKLLSIKGSYFVLINSMALEGDGCFL------ 151 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~i~lds~~~~~~~~~~------ 151 (293)
..++.++.+..||-+.++.+......+.+++ ++|. ..+.+++.+|+++-++............
T Consensus 73 ~~G~d~vslANNH~~D~G~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~ 152 (250)
T PF09587_consen 73 DAGFDVVSLANNHIFDYGEEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPY 152 (250)
T ss_pred HcCCCEEEecCCCCccccHHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCccccccccc
Confidence 3577888888899776543211122222221 2221 1246788899888887444322111000
Q ss_pred ----------CchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccc
Q psy2930 152 ----------CKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQR 221 (293)
Q Consensus 152 ----------~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
.......++.+.+.++.+++ ..+.+|+++|--.-.... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~r~-----------~~D~vIv~~HwG~e~~~~----p~--------------- 202 (250)
T PF09587_consen 153 GFSYRPDKAGLNPNRPGIERIKEDIREARK-----------KADVVIVSLHWGIEYENY----PT--------------- 202 (250)
T ss_pred cccccccccccccccchHHHHHHHHHHHhc-----------CCCEEEEEeccCCCCCCC----CC---------------
Confidence 00112234555555555543 567889999964321111 00
Q ss_pred ccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccce
Q psy2930 222 WECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSF 268 (293)
Q Consensus 222 ~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~ 268 (293)
.-.++....++ +.++++|+.+|.|..+..-...++.-.|..+.|
T Consensus 203 --~~q~~~a~~li-daGaDiIiG~HpHv~q~~E~y~~~~I~YSLGNf 246 (250)
T PF09587_consen 203 --PEQRELARALI-DAGADIIIGHHPHVIQPVEIYKGKPIFYSLGNF 246 (250)
T ss_pred --HHHHHHHHHHH-HcCCCEEEeCCCCcccceEEECCEEEEEeCccc
Confidence 00112333333 358999999999999864211223444444443
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG3325|consensus | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.026 Score=43.20 Aligned_cols=59 Identities=20% Similarity=0.125 Sum_probs=41.6
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC----C--CCCceEEEEEecCCce
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN----K--NNPSFLMGYVVENSSG 289 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~----~--~~p~f~~~~~~~~~~~ 289 (293)
.+..+.++..++..++||+|....+-+. |.-.++-+|.+... . ..|+|.+++++.....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye~e--g~ffvnPGSaTGAfn~~~t~~~~PSFvLmDiqg~~~v 162 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYEHE--GKFFVNPGSATGAFNVSDTDIIVPSFVLMDIQGSTVV 162 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEEeC--CcEEeCCCcccCCCcccccCCCCCceEEEEecCCEEE
Confidence 5555666669999999999999876543 34455555544332 1 4799999999987643
|
|
| >KOG4419|consensus | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.21 Score=46.88 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=47.4
Q ss_pred CCCCceEEEEEecCCcCCCCC---CchhHHHHhHHHHHHHHHHHHHhcCCCE-EEEcCccCCCCccCC-hhhHHHHHHHH
Q psy2930 8 ESINNIKAIFIADTHLLGPFR---GHWFDKLRREWQMYKTFQTAVALHQPEH-IFVLGDLLDEGQYVG-GEDFDNYVRRF 82 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pd~-vi~~GDl~~~~~~~~-~~~~~~~~~~~ 82 (293)
......++.+.||+|.....- ..+-..++.-..+...+.+.++...+|. ++-+||+-++..+.+ -+........+
T Consensus 38 ~~~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l 117 (602)
T KOG4419|consen 38 LNWGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFL 117 (602)
T ss_pred cccccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCCchHHHHHH
Confidence 344557899999999875521 1111111111123333333344455655 667999888533221 01111223344
Q ss_pred HhhhcCCCCceEEEecCCCCCCC
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
.+++ +- =+++.|||+++.
T Consensus 118 ~~~~--~y---D~l~lGNHEl~~ 135 (602)
T KOG4419|consen 118 FKMM--PY---DILTLGNHELYQ 135 (602)
T ss_pred HhcC--cc---chhhhcchhhhh
Confidence 5554 11 267899999975
|
|
| >KOG3818|consensus | Back alignment and domain information |
|---|
Probab=92.89 E-value=2 Score=39.09 Aligned_cols=122 Identities=11% Similarity=0.173 Sum_probs=70.4
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCcc-CChhhHHHHHHHHHhhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQY-VGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~-~~~~~~~~~~~~~~~~~ 86 (293)
+..+.-.|+++||+|++.... +. ..+.+.+..+...|-++|+.|-....... .+-.++.+.++.++..+
T Consensus 278 ~~~~d~~fVfLSdV~LD~~~v---m~-------aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l 347 (525)
T KOG3818|consen 278 AENTDTSFVFLSDVFLDDKKV---ME-------ALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQL 347 (525)
T ss_pred HhCcCceEEEEehhccccHHH---HH-------HHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHHHHHHhhc
Confidence 344556899999999943321 11 11223333344688999999999886442 23455666677776664
Q ss_pred cC----CCCceEEEecCCCCCCCCCC-CCchhHHHHHHHhCCC-CcceEEeCCEEEEEE
Q psy2930 87 ST----PDGTELHVVPGNHDMGFHYR-LHPYLNDRFSRAFNSS-MVKLLSIKGSYFVLI 139 (293)
Q Consensus 87 ~~----~~~~~~~~v~GNHD~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~l 139 (293)
.- ..+..+++|||-.|-+.+.- .++.....|-+.+... .+.+|..+-.|+...
T Consensus 348 ~~~~~~~ekT~fIFVPGP~Dp~~~~iLPr~piP~~~~~~i~kv~~~tvfasNPcRIqy~ 406 (525)
T KOG3818|consen 348 TCFRKDYEKTQFIFVPGPNDPWVDNILPRPPIPSLFTKHISKVCKNTVFASNPCRIQYC 406 (525)
T ss_pred cccccccccceEEEecCCCCCCcCccCCCCCchHHHHHHHHhhcCCceeccCCeeeEee
Confidence 21 24578999999999876431 1111223333322221 145666666666654
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=90.97 E-value=6.6 Score=33.34 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHH-
Q psy2930 41 MYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSR- 119 (293)
Q Consensus 41 ~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~- 119 (293)
+.+.+.+..++.++|+||..|.....|.-.+.+. ++.+.+ .|+. .+..|||=.... ...+.+.+
T Consensus 15 v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~----~~~L~~-----~GvD-viT~GNH~wdkk-----ei~~~i~~~ 79 (253)
T PF13277_consen 15 VKEHLPELKEEYGIDFVIANGENAAGGFGITPKI----AEELFK-----AGVD-VITMGNHIWDKK-----EIFDFIDKE 79 (253)
T ss_dssp HHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHH----HHHHHH-----HT-S-EEE--TTTTSST-----THHHHHHH-
T ss_pred HHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHH----HHHHHh-----cCCC-EEecCcccccCc-----HHHHHHhcC
Confidence 4445555556779999999999998887555333 233333 2444 678999954321 11111111
Q ss_pred --H-----hCC----CCcceEEeCCEEEEEEece
Q psy2930 120 --A-----FNS----SMVKLLSIKGSYFVLINSM 142 (293)
Q Consensus 120 --~-----~~~----~~~~~~~~~~~~~i~lds~ 142 (293)
. +++ ..+.++..++.++.++|-+
T Consensus 80 ~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~ 113 (253)
T PF13277_consen 80 PRILRPANYPPGTPGRGYRIFEKNGKKVAVINLM 113 (253)
T ss_dssp SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE
T ss_pred CCcEECCCCCCCCCcCcEEEEEECCEEEEEEECc
Confidence 1 111 1256788899988888543
|
|
| >PHA03008 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.80 E-value=2.8 Score=33.88 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=28.5
Q ss_pred CCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 186 QPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 186 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.-||++|.||+..... .++...+.+-+.+.+|++.+.||.-+.
T Consensus 162 tDILITHgPP~GhLD~----------------------~vGC~~Ll~~I~rVKPKyHVFGh~~~~ 204 (234)
T PHA03008 162 CDILITASPPFAILDD----------------------DLACGDLFSKVIKIKPKFHIFNGLTQF 204 (234)
T ss_pred CCEEEeCCCCcccccc----------------------ccCcHHHHHHHHHhCCcEEEeCCcccc
Confidence 6699999999765421 112223444455778999999995444
|
|
| >KOG2476|consensus | Back alignment and domain information |
|---|
Probab=89.61 E-value=14 Score=34.14 Aligned_cols=190 Identities=11% Similarity=0.054 Sum_probs=92.1
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc-CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
..||+++.|.-. .+. .+.+.+.++-++. ..|++|+.|+++.... ...+|..+..... .-
T Consensus 5 ~~kILv~Gd~~G------r~~-------eli~rI~~v~Kk~GpFd~liCvGnfF~~~~--~~~e~~~ykng~~-----~v 64 (528)
T KOG2476|consen 5 DAKILVCGDVEG------RFD-------ELIKRIQKVNKKSGPFDLLICVGNFFGHDT--QNAEVEKYKNGTK-----KV 64 (528)
T ss_pred CceEEEEcCccc------cHH-------HHHHHHHHHhhcCCCceEEEEecccCCCcc--chhHHHHHhcCCc-----cC
Confidence 368899888733 211 2334445554555 4799999999998622 3344444322222 34
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHH--HHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhh
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDR--FSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKC 168 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~ 168 (293)
.+|+|+.-+|--....+-......+- --.+.+.- ...-...|+.+.-|.+..-... ......+...+.+...+..
T Consensus 65 PiptY~~g~~~~~~~ky~~n~~g~Ei~~Nlt~Lg~~-G~~~l~sGl~IaYLsG~e~~~~--~~~~fs~~dv~~l~~~~~~ 141 (528)
T KOG2476|consen 65 PIPTYFLGDNANETEKYFENSDGKEIAENLTYLGRK-GTYKLASGLTIAYLSGPESSEK--GESKFSQADVDELRHRLDT 141 (528)
T ss_pred ceeEEEecCCCCccceecccCCCcccccceeeeccc-ceEeecCCcEEEEeeccccccc--cccccCHHHHHHHhccccc
Confidence 67889888887421110000000000 00011111 1222334677766633221111 2223455566666655554
Q ss_pred cccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCC
Q psy2930 169 CRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTH 248 (293)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H 248 (293)
++. ....-|+++-.=+...+.. +...+.++ ..-+.....++.....+++.|+|=.-
T Consensus 142 ~~~-----------~~gvDILlTseWP~~v~e~------~ss~~~~~-------~~~gs~lvs~La~~lkPRYHFa~~~~ 197 (528)
T KOG2476|consen 142 QKE-----------FKGVDILLTSEWPADVQER------NSSLPESK-------RLCGSELVSELAAELKPRYHFAGSDG 197 (528)
T ss_pred ccc-----------cCCccEEEecCCcchhhhc------cccCcccc-------CCcchHHHHHHHHhcCcceEeccCCC
Confidence 433 4455677765443322210 00000010 12223466778888899998888663
|
|
| >KOG2732|consensus | Back alignment and domain information |
|---|
Probab=86.36 E-value=26 Score=31.88 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=104.4
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH----------hcCCCEEEEcCccCCCCccC------------
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA----------LHQPEHIFVLGDLLDEGQYV------------ 70 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~pd~vi~~GDl~~~~~~~------------ 70 (293)
-+|+++|=+-++...... .++ +.+.+++. ....+-++++|.++......
T Consensus 176 ~~i~lVSGL~l~~~~~~~--~~l-------~~l~D~l~g~lg~e~~~~~~~i~rliv~Gn~l~~~~~~~~~~~~~~~~~~ 246 (435)
T KOG2732|consen 176 RKIALVSGLDLGGGSKNL--LRL-------ELLVDWLRGQLGNEYEQSASSIGRLIVAGNSLSFSIKILDSQSTSISRLT 246 (435)
T ss_pred CEEEEEeccccCCCcchh--HHH-------HHHHHHHhcccCccccccccccceEEEeccccchhhhccccceeeeeecc
Confidence 379999999887665321 111 11222222 12457799999998842210
Q ss_pred ------ChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCC-CCCCCchhHHHHH-------HHhCCCCcceEEeCCEEE
Q psy2930 71 ------GGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGF-HYRLHPYLNDRFS-------RAFNSSMVKLLSIKGSYF 136 (293)
Q Consensus 71 ------~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 136 (293)
......++...+.++ ...+++=+.||=.|-.. ....++.....|. ..-...++|.+.++++++
T Consensus 247 ~~~~~~~~~~v~~ld~~L~~~---~~s~~VdimPG~~Dp~~~~lPqqPlh~~lfp~s~~~~~~~q~vTNPy~~~ld~~~v 323 (435)
T KOG2732|consen 247 KKDSAASVIPVKELDNFLAQI---PASISVDIMPGVNDPSNFMLPQQPLHRCLFPKSPQSLSTLQLVTNPYEFSLDGARV 323 (435)
T ss_pred ccccccccccHHHHHHHHHhc---cccCCccCCCCCCChhhccCCcCCcchhhhccCccccchhhcccCceEEEEcCEEE
Confidence 111223322233333 46788999999998632 1122222222222 222233579999999999
Q ss_pred EEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcc
Q psy2930 137 VLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRK 216 (293)
Q Consensus 137 i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~ 216 (293)
+.. .|.+.. ++. ...-.+..|+.. ..++-..|+.|.....-.|.+. .+++
T Consensus 324 l~t-----SGqNvs--Dl~--ry~~~~s~ld~l---------------e~tlkw~HvaPTaPDTL~cyPf-----tekD- 373 (435)
T KOG2732|consen 324 LGT-----SGQNVS--DLL--RYSSKKSGLDAL---------------ENTLKWGHVAPTAPDTLWCYPF-----TEKD- 373 (435)
T ss_pred Eec-----CCccHH--HHh--hhcchhhHHHHH---------------hhhheeccccCCCCCccccccc-----ccCC-
Confidence 987 332211 000 000112223222 2455667887754433334331 1221
Q ss_pred cccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCC--CeeEEecccee
Q psy2930 217 KFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYG--KVHEYTVPSFS 269 (293)
Q Consensus 217 ~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~--~~~~~~~~s~~ 269 (293)
..+-. ..+.++++|-.=.........+ .+..+++|.||
T Consensus 374 ------PFv~~---------~~Phvy~~GNqp~f~~r~i~~~g~~~~Lv~VP~Fs 413 (435)
T KOG2732|consen 374 ------PFVMD---------ECPHVYIVGNQPKFGTRLIEGGGKNTLLVCVPKFS 413 (435)
T ss_pred ------Ceeec---------CCCeEEEecCCCcccceeeecCCceEEEEEccccc
Confidence 11111 1589999999877765543333 68999999987
|
|
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=85.83 E-value=0.8 Score=43.54 Aligned_cols=58 Identities=19% Similarity=0.402 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCC
Q psy2930 37 REWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 37 ~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
+...+..++...++++-.|-+=+.|||+|-|+.. + .+.+.++..- -|=+--||||+-|
T Consensus 168 ~a~~fI~al~~lIqrL~VDhLHIvGDIyDRGp~p--d---~ImD~Lm~~h------svDIQWGNHDIlW 225 (640)
T PF06874_consen 168 RADEFIIALSELIQRLAVDHLHIVGDIYDRGPRP--D---KIMDRLMNYH------SVDIQWGNHDILW 225 (640)
T ss_pred cHHHHHHHHHHHHHHHhhhheeecccccCCCCCh--h---HHHHHHhcCC------CccccccchHHHH
Confidence 3456888899999999999999999999988732 2 3344444432 2456679999854
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >KOG0374|consensus | Back alignment and domain information |
|---|
Probab=82.49 E-value=2.3 Score=37.80 Aligned_cols=60 Identities=15% Similarity=0.107 Sum_probs=35.7
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCceeeccCC--CeeEEeccceeccCCCCCceEEEEEecC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYG--KVHEYTVPSFSWRNKNNPSFLMGYVVEN 286 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~--~~~~~~~~s~~~~~~~~p~f~~~~~~~~ 286 (293)
-++....+.+++.+.++++-||.=....+-.-.+ -++.+.+|.-|-...+ ...++.++++
T Consensus 231 fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n--~gavm~Vd~~ 292 (331)
T KOG0374|consen 231 FGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDN--AGAVMRVDKN 292 (331)
T ss_pred ecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCC--ceEEEEECCC
Confidence 3456788899999999999999644433211111 3566666655544322 2455555543
|
|
| >COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.25 E-value=2.7 Score=38.55 Aligned_cols=59 Identities=19% Similarity=0.393 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCC
Q psy2930 36 RREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
++...+.-++...++++-.|.+=+.|||.+.|+... .+.+++...- .+=+--||||+-|
T Consensus 173 ~~a~e~I~ala~~iqrLvVDhLHiVGDIyDRGP~pd-----~Imd~L~~yh------svDiQWGNHDilW 231 (648)
T COG3855 173 DRAKEFIIALAYLIQRLVVDHLHIVGDIYDRGPYPD-----KIMDTLINYH------SVDIQWGNHDILW 231 (648)
T ss_pred chHHHHHHHHHHHHHHHhhhheeeecccccCCCCch-----HHHHHHhhcc------cccccccCcceEE
Confidence 444567788888899999999999999999988432 3344555433 2334569999854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 293 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-08 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-05 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-05 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 1e-04 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 2e-08
Identities = 48/299 (16%), Positives = 88/299 (29%), Gaps = 55/299 (18%)
Query: 4 PASPESINNIKAIFIADTHLLGPF---RGHWFDKLRRE---------WQMYKTFQTAVAL 51
A E N+ + D H P G F+K ++ F V
Sbjct: 31 TAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES 90
Query: 52 HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHP 111
+ + + + GDL + G+ E+ + + GT++ VVPGNHD+ +
Sbjct: 91 KKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKN-----GTQVFVVPGNHDI-NNPWARK 144
Query: 112 YLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDR--ISLISAKLKCC 169
+ D+ S I + + E +L P+ + L +A K
Sbjct: 145 FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTN 204
Query: 170 RKDRECPKSMKLGSY----------------SQPIILQHFPLYRESDEECSGPDSAPDIE 213
+ L + ++ I + H L +D G I
Sbjct: 205 MQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYT----IN 260
Query: 214 KRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHN---GCHKYHAYGKVHEYTVPSFS 269
++ D L + + GH H K ++ + + S
Sbjct: 261 YNQQVI-----------DALTEG-AMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALS 307
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 43/251 (17%)
Query: 18 IADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGEDFD 76
I+DTH + + AL +P+ + V GD+++ G+ +
Sbjct: 6 ISDTHFRSR-GEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVAR 64
Query: 77 NYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYF 136
+ L+++PGNHD + + + ++M + +
Sbjct: 65 QILGSL--------NYPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRL 116
Query: 137 VLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLY 196
+ I+S +L + IS + A+L + + P I H P
Sbjct: 117 LFIDSSRAGTSKGWLT---DETISWLEAQLF---EGGDKPA----------TIFMHHPPL 160
Query: 197 RESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHA 256
+ D E + ++ + + + GH H+
Sbjct: 161 ---PLGNAQMD-PIACENGHRLL-----------ALVERFPSLTRIFCGHNHSLTMT--Q 203
Query: 257 YGKVHEYTVPS 267
Y + T+P
Sbjct: 204 YRQALISTLPG 214
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 4e-05
Identities = 40/273 (14%), Positives = 80/273 (29%), Gaps = 56/273 (20%)
Query: 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-----HQPEHIFVLGDLLDE 66
+ + I+DTHL+G R + + +P+ I GDL D+
Sbjct: 25 DYVLLHISDTHLIGGDRRLY-----GAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK 79
Query: 67 GQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-- 124
G+ + +R F+ G EL V GNHD L S
Sbjct: 80 GEP---AAYRK-LRGLVEPFAAQLGAELVWVMGNHD------DRAELRKFLLDEAPSMAP 129
Query: 125 MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSY 184
+ ++ I G +++++ + ++ ++ +L D
Sbjct: 130 LDRVCMIDGLRIIVLDTSVPGHHHGEIR---ASQLGWLAEELATPAPD------------ 174
Query: 185 SQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVID 244
I+ H P I E + + +L + R ++
Sbjct: 175 -GTILALHHPP----------------IPSVLDMAVTVELRDQAALGRVLRGTDVRAILA 217
Query: 245 GHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPS 277
GH H + + + + + +
Sbjct: 218 GHLHYSTNAT--FVGIPVSVASATCYTQDLTVA 248
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 1e-04
Identities = 38/320 (11%), Positives = 82/320 (25%), Gaps = 73/320 (22%)
Query: 17 FIADTHLLGPFRGHWFDK-----LRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVG 71
IAD G + + R + + + + + LGD++D G
Sbjct: 10 LIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIID-GHNRR 68
Query: 72 GEDFDNYVRRFYSLFSTPDGTELHVVPGNHDM----------GFHYRLHPYLNDRFSRAF 121
+ D + + +H V GNH+ D S
Sbjct: 69 RDASDRALDTVMAELDACSVD-VHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLI 127
Query: 122 NSSM--VKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSM 179
+ + FVL+++ D + + + S ++ ++
Sbjct: 128 GDDIYAYEFSPAPNFRFVLLDAY----DLSVIGREEESEKHTHSWRILTQHNHNLQDLNL 183
Query: 180 KLGSYSQP--------------------------------IILQHFPLYRESDEECSGPD 207
S +I H P++ + +
Sbjct: 184 PPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAW 243
Query: 208 SAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPS 267
+ + +L + + I GH H+G + G T+
Sbjct: 244 NHEAV-----------------LSVLRSHQSVLCFIAGHDHDGGRCTDSSG-AQHITLEG 285
Query: 268 FSWRNKNNPSFLMGYVVENS 287
++ +F Y+ E+
Sbjct: 286 VIETPPHSHAFATAYLYEDR 305
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 293 | |||
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.96 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.96 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.95 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.95 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.93 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.93 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.88 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.87 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.87 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.87 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.83 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.82 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.8 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.74 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.73 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.71 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.7 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.7 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.7 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.7 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.7 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.67 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.67 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.67 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.66 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.62 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.6 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.55 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.52 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 99.1 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 99.1 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.08 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 99.03 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.97 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.94 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.9 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.86 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.84 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.63 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.35 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 98.35 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.31 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.26 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 98.16 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 98.14 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 98.07 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.95 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.91 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.89 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.8 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.76 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.7 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.58 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.5 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 97.48 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.4 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 96.38 |
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-28 Score=211.96 Aligned_cols=234 Identities=15% Similarity=0.178 Sum_probs=158.7
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh--cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL--HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL 85 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~ 85 (293)
.+.++|||+++||+|++......+. ... .....+.+.+.+++ .++|+||++||+++.+.. ..+..+.+.+..+
T Consensus 21 ~~~~~~ri~~iSD~H~~~~~~~~~~-~~~-~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~---~~~~~~~~~l~~l 95 (330)
T 3ib7_A 21 HPRPDYVLLHISDTHLIGGDRRLYG-AVD-ADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP---AAYRKLRGLVEPF 95 (330)
T ss_dssp SCCCSEEEEEECCCCBCSSSCCBTT-TBC-HHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH---HHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCCccCCCCccccc-ccC-HHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHH
Confidence 5567899999999999765432211 001 11223334444555 699999999999997753 3344433333332
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHH
Q psy2930 86 FSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRI 159 (293)
Q Consensus 86 ~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l 159 (293)
.. ..++|+++++||||.. ..|...+.. ..++.+..++++|+++|+.... ...+....+|+
T Consensus 96 ~~-~~~~pv~~v~GNHD~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~---~~~~~~~~~q~ 161 (330)
T 3ib7_A 96 AA-QLGAELVWVMGNHDDR----------AELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPG---HHHGEIRASQL 161 (330)
T ss_dssp HH-HHTCEEEECCCTTSCH----------HHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTT---CCSBCCCHHHH
T ss_pred Hh-hcCCCEEEeCCCCCCH----------HHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCC---CCCCccCHHHH
Confidence 21 1368999999999973 223333321 1357899999999999987632 22344678899
Q ss_pred HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCc
Q psy2930 160 SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNP 239 (293)
Q Consensus 160 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~ 239 (293)
+||++.|+.. +..++|+++|||+....... ...+...+.+.+.++++++++
T Consensus 162 ~wl~~~l~~~-------------~~~~~iv~~Hh~p~~~~~~~----------------~~~~~~~~~~~l~~~l~~~~v 212 (330)
T 3ib7_A 162 GWLAEELATP-------------APDGTILALHHPPIPSVLDM----------------AVTVELRDQAALGRVLRGTDV 212 (330)
T ss_dssp HHHHHHTTSC-------------CTTCEEEECSSCSSCCSSGG----------------GGGGSBSCHHHHHHHHTTSSE
T ss_pred HHHHHHHHhc-------------ccCCeEEEEECCCCCCCccc----------------cccccccCHHHHHHHHhccCc
Confidence 9999999865 34558999999997543210 011223455678899999999
Q ss_pred cEEEecCCCCCceeeccCCCeeEEeccceeccC------------CCCCceEEEEEecCCceee
Q psy2930 240 RLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN------------KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 240 ~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~------------~~~p~f~~~~~~~~~~~~~ 291 (293)
+++|+||+|...... .+++++++.||.+... .+.+||.+++++++++.++
T Consensus 213 ~~v~~GH~H~~~~~~--~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~~~~~ 274 (330)
T 3ib7_A 213 RAILAGHLHYSTNAT--FVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHS 274 (330)
T ss_dssp EEEEECSSSSCEEEE--ETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSCEEEE
T ss_pred eEEEECCCCCcccce--ECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCCeEEE
Confidence 999999999998653 2488999999887421 1357899999999987765
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=209.91 Aligned_cols=242 Identities=15% Similarity=0.154 Sum_probs=156.9
Q ss_pred CCCceEEEEEecCCcCCCCCC--------chhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHH
Q psy2930 9 SINNIKAIFIADTHLLGPFRG--------HWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVR 80 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~ 80 (293)
+.+.|||+++||+|++..... .+... .....+.+.+.+++.+||+||++||+++.+...... ....++
T Consensus 2 ~~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~-~~~~~~ 77 (322)
T 2nxf_A 2 EDPVFTFGLIADVQYADIEDGENYLRTRRRYYRG---SADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDA-SDRALD 77 (322)
T ss_dssp -CCSEEEEEECCCCBCSSCCEECTTSSSEECTTH---HHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTC-HHHHHH
T ss_pred CCCceEEEEEeeccccccCcccccccchHHHHHH---HHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchH-HHHHHH
Confidence 456799999999999874321 11100 111223344445558999999999999976421111 112234
Q ss_pred HHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhC-----------------CCCcceEEe-CCEEEEEEece
Q psy2930 81 RFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFN-----------------SSMVKLLSI-KGSYFVLINSM 142 (293)
Q Consensus 81 ~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-~~~~~i~lds~ 142 (293)
.+.+.+. ..++|+++++||||.+.. ....|.+.+. ...++.+.. ++++||++|+.
T Consensus 78 ~~~~~l~-~~~~p~~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~ 150 (322)
T 2nxf_A 78 TVMAELD-ACSVDVHHVWGNHEFYNF------SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAY 150 (322)
T ss_dssp HHHHHHH-TTCSEEEECCCHHHHHHC------CHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTT
T ss_pred HHHHHHH-hcCCcEEEecCCCCcccC------CHHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCc
Confidence 4444443 346899999999998411 0122332222 112577776 99999999997
Q ss_pred eccCCC---------------------------------------CCCCchhHHHHHHHHHHhhhcccCCCCCccccCCC
Q psy2930 143 ALEGDG---------------------------------------CFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGS 183 (293)
Q Consensus 143 ~~~~~~---------------------------------------~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~ 183 (293)
.+...+ ...+....+|++||++.|+.+.+ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-----------~ 219 (322)
T 2nxf_A 151 DLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-----------K 219 (322)
T ss_dssp SBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-----------H
T ss_pred eecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-----------c
Confidence 652110 00134568899999999987632 2
Q ss_pred CCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEecCCCCCceeeccCCCeeE
Q psy2930 184 YSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVIDGHTHNGCHKYHAYGKVHE 262 (293)
Q Consensus 184 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~GH~H~~~~~~~~~~~~~~ 262 (293)
+.++||++|+|++...... . ....+.+.+.++++++ +++++|+||+|....... .+++++
T Consensus 220 ~~~~iv~~H~p~~~~~~~~-----------~-------~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-~~g~~~ 280 (322)
T 2nxf_A 220 QERVLIFSHLPVHPCAADP-----------I-------CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-SSGAQH 280 (322)
T ss_dssp TCEEEEEESSCCCTTSSCG-----------G-------GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-TTSCEE
T ss_pred CCcEEEEEccCCCCCCCCc-----------c-------ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-cCCceE
Confidence 5678999999997543210 0 0112455778899988 799999999999987641 347899
Q ss_pred EeccceeccCCCCCceEEEEEecCCceee
Q psy2930 263 YTVPSFSWRNKNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 263 ~~~~s~~~~~~~~p~f~~~~~~~~~~~~~ 291 (293)
+++|++.-.....++|.+++++++++.++
T Consensus 281 i~~~~~~~~~~~~~~y~~v~~~~~~~~~~ 309 (322)
T 2nxf_A 281 ITLEGVIETPPHSHAFATAYLYEDRMVMK 309 (322)
T ss_dssp EECCCGGGCCTTSCEEEEEEECSSEEEEE
T ss_pred EEecchhhCCCCCCcEEEEEEECCeEEEE
Confidence 99988754334568999999999988765
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=198.40 Aligned_cols=229 Identities=17% Similarity=0.168 Sum_probs=148.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
|||+++||+|++......+- ... .....+++.+.+++. ++|+||++||+++.+. ..++ +.+.+.+. ..
T Consensus 1 mri~~iSD~H~~~~~~~~~g-~~~-~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~---~~~~----~~~~~~l~-~l 70 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYG-FID-VNAANADVVSQLNALRERPDAVVVSGDIVNCGR---PEEY----QVARQILG-SL 70 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTT-TBC-HHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC---HHHH----HHHHHHHT-TC
T ss_pred CEEEEEecCCcCCCCccccc-ccC-HHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC---HHHH----HHHHHHHH-hc
Confidence 79999999999754321110 000 111223344444444 6899999999999765 2233 33444443 34
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHH-Hh--CC---CCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHH
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSR-AF--NS---SMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISA 164 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~-~~--~~---~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~ 164 (293)
++|+++++||||.... ..+.|.. ++ .. ..++.+..++++|+++|+..... ..+....+|++||++
T Consensus 71 ~~p~~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~---~~~~~~~~~~~wl~~ 141 (274)
T 3d03_A 71 NYPLYLIPGNHDDKAL------FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGT---SKGWLTDETISWLEA 141 (274)
T ss_dssp SSCEEEECCTTSCHHH------HHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTC---SSBCCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHH------HHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCCCC---CCCeeCHHHHHHHHH
Confidence 6899999999998421 1122222 11 11 12567788999999999876432 233466789999999
Q ss_pred HhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEE
Q psy2930 165 KLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVI 243 (293)
Q Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl 243 (293)
.|+.. ++.++|+++|+|++..... ..+ .+...+...+.++++++ +++++|
T Consensus 142 ~l~~~-------------~~~~~iv~~H~p~~~~~~~---~~~-------------~~~~~~~~~l~~~l~~~~~v~~vl 192 (274)
T 3d03_A 142 QLFEG-------------GDKPATIFMHHPPLPLGNA---QMD-------------PIACENGHRLLALVERFPSLTRIF 192 (274)
T ss_dssp HHHHH-------------TTSCEEEEESSCSSCCSCT---TTG-------------GGSBTTTHHHHHHHHHCTTEEEEE
T ss_pred HHHhC-------------CCCCEEEEECCCCcccCCc---ccC-------------cccCcCHHHHHHHHHhCCCceEEE
Confidence 99864 4578999999999754321 010 01223345678899988 899999
Q ss_pred ecCCCCCceeeccCCCeeEEeccceecc------------CCCCCceEEEEEecCCceee
Q psy2930 244 DGHTHNGCHKYHAYGKVHEYTVPSFSWR------------NKNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 244 ~GH~H~~~~~~~~~~~~~~~~~~s~~~~------------~~~~p~f~~~~~~~~~~~~~ 291 (293)
+||+|...... .++++.++.|+.+.+ .+..|||.+++++++++++.
T Consensus 193 ~GH~H~~~~~~--~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~~~~~~~ 250 (274)
T 3d03_A 193 CGHNHSLTMTQ--YRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVSY 250 (274)
T ss_dssp ECSSSSCEEEE--ETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEEE
T ss_pred eCCCCCchhhe--ECCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEeCCcEEEE
Confidence 99999998653 236777777766532 12468999999999877654
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=210.95 Aligned_cols=244 Identities=15% Similarity=0.215 Sum_probs=158.6
Q ss_pred CCCceEEEEEecCCcCCCCC---CchhHHH---------HhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHH
Q psy2930 9 SINNIKAIFIADTHLLGPFR---GHWFDKL---------RREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFD 76 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~ 76 (293)
++++|||+++||+|++.... +...... .......+++.+.+++.+||+||++||+++.+.. ..+.
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~---~~~~ 112 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK---TSHE 112 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH---HHHH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH---HHHH
Confidence 45679999999999975421 1111100 0012344555666667899999999999997752 2344
Q ss_pred HHHHHHHhhhcCCCCceEEEecCCCCCCCCCCC----------CchhHHHHHHHhCCC-------------CcceEEeCC
Q psy2930 77 NYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRL----------HPYLNDRFSRAFNSS-------------MVKLLSIKG 133 (293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~----------~~~~~~~~~~~~~~~-------------~~~~~~~~~ 133 (293)
...+.+..+. ..++|+++++||||....... .......|.+.|+.. .+.....++
T Consensus 113 ~~~~~l~~l~--~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 113 ELAKKLTQVE--KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHH--HTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHH--hCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 4344444432 247899999999998642110 011246677777731 122334789
Q ss_pred EEEEEEeceeccC-----CCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCC
Q psy2930 134 SYFVLINSMALEG-----DGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDS 208 (293)
Q Consensus 134 ~~~i~lds~~~~~-----~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~ 208 (293)
++|++||+..+.. +....+....+|++||++.|+.+.+ .+.++|+++|+|+....... .
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-----------~~~~~Iv~~H~p~~~~~~~~---~-- 254 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-----------NGAKLIPVLHHNLTDHNDVI---Q-- 254 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-----------TTCEEEEECSSBSSCSSCC-------
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-----------cCCeEEEEECCCCccccccc---c--
Confidence 9999999987541 1122344667999999999987643 35678999999997543210 0
Q ss_pred chhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeec--cCC-CeeEEeccceeccCCCCCceEEEEEec
Q psy2930 209 APDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYH--AYG-KVHEYTVPSFSWRNKNNPSFLMGYVVE 285 (293)
Q Consensus 209 ~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~--~~~-~~~~~~~~s~~~~~~~~p~f~~~~~~~ 285 (293)
+.+...+...+.+++++++++++|+||+|....... ..| ++..++.+|++. .+++|.++++.+
T Consensus 255 -----------~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~---~p~~y~il~i~~ 320 (443)
T 2xmo_A 255 -----------KGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV---FPHKYGNITYSA 320 (443)
T ss_dssp -----------CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS---TTCEEEEEEEET
T ss_pred -----------cccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc---CCCCeEEEEEeC
Confidence 011222455778899999999999999999986432 122 367777777653 358999999999
Q ss_pred CC
Q psy2930 286 NS 287 (293)
Q Consensus 286 ~~ 287 (293)
++
T Consensus 321 ~~ 322 (443)
T 2xmo_A 321 KN 322 (443)
T ss_dssp TT
T ss_pred CC
Confidence 87
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-26 Score=197.75 Aligned_cols=239 Identities=18% Similarity=0.195 Sum_probs=151.4
Q ss_pred CCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCc-c-CChhhHHHHHHHHHhhh
Q psy2930 9 SINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQ-Y-VGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~-~-~~~~~~~~~~~~~~~~~ 86 (293)
++++|||+++||+|++.... +... ....+.+++.+.++..+||+||++||++.... . ..+.++ .+.+.+++
T Consensus 3 ~~~~~~~~~isD~h~~~~~~--~~~~--~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~---~~~~~~~~ 75 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAP--FHTA--REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRF---QETFEDVF 75 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTT--SSCH--HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHH---HHHTTTTS
T ss_pred CCCceEEEEEcccCCCCCcc--ccCc--hHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHH---HHHHHHHc
Confidence 35679999999999975422 1100 11235566667677789999999999976422 1 112223 33344433
Q ss_pred cC-CC-CceEEEecCCCCCCCCCCCCchhHHHHHH---HhC-CCCcceEEe------CCEEEEEEeceeccCCC------
Q psy2930 87 ST-PD-GTELHVVPGNHDMGFHYRLHPYLNDRFSR---AFN-SSMVKLLSI------KGSYFVLINSMALEGDG------ 148 (293)
Q Consensus 87 ~~-~~-~~~~~~v~GNHD~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~------~~~~~i~lds~~~~~~~------ 148 (293)
.. .. ++|+++++||||...... ....|.. .+. ...++.+.+ ++++|++||+..+.+..
T Consensus 76 ~~~~l~~~p~~~v~GNHD~~~~~~----~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 151 (313)
T 1ute_A 76 SDPSLRNVPWHVLAGNHDHLGNVS----AQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 151 (313)
T ss_dssp CSGGGTTCCEEECCCHHHHHSCHH----HHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTC
T ss_pred CchhhcCCCEEEECCCCccCCCcc----ccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCcccccc
Confidence 10 13 789999999999853210 0000110 111 122455665 48999999998764321
Q ss_pred ----CCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccc
Q psy2930 149 ----CFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWEC 224 (293)
Q Consensus 149 ----~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (293)
...+....+|++||++.|+.. +..++|+++|+|++..... ... ..
T Consensus 152 ~~~~~~~~~~~~~q~~wL~~~L~~~-------------~~~~~iv~~H~p~~~~~~~---~~~---------------~~ 200 (313)
T 1ute_A 152 QPERPRNLALARTQLAWIKKQLAAA-------------KEDYVLVAGHYPVWSIAEH---GPT---------------HC 200 (313)
T ss_dssp SCCSCSCHHHHHHHHHHHHHHHHHC-------------CCSEEEEECSSCSSCCSSS---CCC---------------HH
T ss_pred ccCCccccchHHHHHHHHHHHHHhC-------------CCCeEEEEECCCCccCCCC---CCc---------------HH
Confidence 112345789999999999875 4568899999999764321 000 00
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCC---------------------CCCceEEEEE
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK---------------------NNPSFLMGYV 283 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~---------------------~~p~f~~~~~ 283 (293)
+ .+.+.+++++++++++|+||+|....... .+++.+++++|.+.... ..+||.++++
T Consensus 201 ~-~~~l~~~l~~~~v~~~l~GH~H~~~~~~~-~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v 278 (313)
T 1ute_A 201 L-VKQLLPLLTTHKVTAYLCGHDHNLQYLQD-ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI 278 (313)
T ss_dssp H-HHHTHHHHHHTTCSEEEECSSSSEEEEEC-TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE
T ss_pred H-HHHHHHHHHHcCCcEEEECChhhhhhccC-CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE
Confidence 0 13567788889999999999998766532 34788888887652110 1269999999
Q ss_pred ecCCceee
Q psy2930 284 VENSSGVN 291 (293)
Q Consensus 284 ~~~~~~~~ 291 (293)
++++++++
T Consensus 279 ~~~~~~~~ 286 (313)
T 1ute_A 279 TPKEMSVT 286 (313)
T ss_dssp CSSCEEEE
T ss_pred EcCEEEEE
Confidence 99887765
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-26 Score=202.30 Aligned_cols=231 Identities=16% Similarity=0.081 Sum_probs=150.6
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCcc-CChhhHHHHHHHHHhhhcCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQY-VGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~-~~~~~~~~~~~~~~~~~~~~ 89 (293)
..+||++++|+|.+.. . .....+++.+.+++.+||+||++||+++.|.. ..+..|.+.++.+.+.....
T Consensus 2 ~~l~f~~igD~g~g~~-----~-----q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~ 71 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTK-----G-----QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGD 71 (342)
T ss_dssp CCEEEEECCSCBSCCH-----H-----HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGT
T ss_pred ceEEEEEEecCCCCCc-----h-----HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhh
Confidence 4699999999997421 1 12344567777788999999999999988652 22344554443333221013
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHH--------------H---------hCCCCcceE----Ee---------C-
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSR--------------A---------FNSSMVKLL----SI---------K- 132 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~--------------~---------~~~~~~~~~----~~---------~- 132 (293)
.++|++.|+||||..... ...-.+.. . ..+..+|.+ .. +
T Consensus 72 ~~~P~~~vlGNHD~~~~~----~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 72 MYMPFFTVLGTRDWTGNY----NAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp TCSEEEECCCHHHHTSCH----HHHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------C
T ss_pred hCCCEEEeCCCCccCCCc----hHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCC
Confidence 689999999999986321 11111111 0 011124433 22 1
Q ss_pred ---CEEEEEEeceeccCCCCC---CCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCC
Q psy2930 133 ---GSYFVLINSMALEGDGCF---LCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGP 206 (293)
Q Consensus 133 ---~~~~i~lds~~~~~~~~~---~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~ 206 (293)
.++|++|||+.+.+.... ......+|++||++.|. ...++||++|+|++..... .
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~---------------~~~~~IV~~HhP~~~~~~~----~ 208 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK---------------IADFIIVVGDQPIYSSGYS----R 208 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH---------------HCSEEEEECSSCSSCSSTT----C
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc---------------cCCcEEEEECCCCCCCCCC----C
Confidence 389999999877643211 01234689999999994 3468999999999875421 0
Q ss_pred CCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCC-------------
Q psy2930 207 DSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK------------- 273 (293)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~------------- 273 (293)
+.. .+ +..+..+|++++++++|+||+|.+..... +++.++++++.+....
T Consensus 209 ~~~--------------~l-~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~ 271 (342)
T 3tgh_A 209 GSS--------------YL-AYYLLPLLKDAEVDLYISGHDNNMEVIED--NDMAHITCGSGSMSQGKSGMKNSKSLFFS 271 (342)
T ss_dssp CCH--------------HH-HHHTHHHHHHTTCCEEEECSSSSEEEEEE--TTEEEEEECCSSCCCCCCSSCCTTEEEEE
T ss_pred CcH--------------HH-HHHHHHHHHHcCCCEEEECCCcceeEEee--CCcEEEEeCccccccccCCCCCCcceeec
Confidence 100 01 24678899999999999999999987642 3688999988763321
Q ss_pred CCCceEEEEEecCCceee
Q psy2930 274 NNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 274 ~~p~f~~~~~~~~~~~~~ 291 (293)
..+||.++++++++++++
T Consensus 272 ~~~Gf~~l~v~~~~l~~~ 289 (342)
T 3tgh_A 272 SDIGFCVHELSNNGIVTK 289 (342)
T ss_dssp CSSEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEEECCEEEEE
Confidence 346999999999887765
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-21 Score=176.40 Aligned_cols=195 Identities=13% Similarity=0.152 Sum_probs=125.8
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCcc--CChhhHHHHHHHHHh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQY--VGGEDFDNYVRRFYS 84 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~--~~~~~~~~~~~~~~~ 84 (293)
.+..++||+++||+|.+. . ....+.++.+. .+||+||++||+++.... .....|..+.+.+..
T Consensus 122 ~~~~~~~f~~~gD~~~~~-----~---------~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~ 187 (426)
T 1xzw_A 122 GPDVPYVFGLIGDIGQTH-----D---------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSER 187 (426)
T ss_dssp CTTCCEEEEEECSCTTBH-----H---------HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEEeCCCCC-----c---------hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHH
Confidence 356789999999999731 1 01223333333 399999999999975331 112345444333443
Q ss_pred hhcCCCCceEEEecCCCCCCCCCCC-CchhHHHHHHHhCCC---------CcceEEeCCEEEEEEeceeccCCCCCCCch
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFHYRL-HPYLNDRFSRAFNSS---------MVKLLSIKGSYFVLINSMALEGDGCFLCKP 154 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 154 (293)
+. ..+|+++++||||....... .......|.+.|.-+ .++.+..++++|++||+.... ..
T Consensus 188 l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~-------~~ 257 (426)
T 1xzw_A 188 SV---AYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGF-------VK 257 (426)
T ss_dssp HH---TTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCC-------ST
T ss_pred HH---hcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccC-------CC
Confidence 33 47899999999999642110 011234566665422 367889999999999985421 13
Q ss_pred hHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHH
Q psy2930 155 AQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLL 234 (293)
Q Consensus 155 ~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll 234 (293)
..+|++||++.|+..... ...++||++|+|++....... .+. ..+ ++.+.+++
T Consensus 258 ~~~Q~~WL~~~L~~~~~~----------~~~w~Iv~~H~P~~~~~~~~~--~~~--------------~~~-r~~l~~ll 310 (426)
T 1xzw_A 258 YSPQYKWFTSELEKVNRS----------ETPWLIVLVHAPLYNSYEAHY--MEG--------------EAM-RAIFEPYF 310 (426)
T ss_dssp TSHHHHHHHHHHHHCCTT----------TCCEEEEECSSCSSCCBSTTT--TTT--------------HHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhhhhc----------CCCEEEEEeccCceeCCCccc--CCC--------------HHH-HHHHHHHH
Confidence 468999999999875310 234589999999976432110 000 011 34677899
Q ss_pred hhcCccEEEecCCCCCcee
Q psy2930 235 DYLNPRLVIDGHTHNGCHK 253 (293)
Q Consensus 235 ~~~~~~lvl~GH~H~~~~~ 253 (293)
.+++++++|+||+|.+...
T Consensus 311 ~~~~VdlvlsGH~H~~~r~ 329 (426)
T 1xzw_A 311 VYYKVDIVFSGHVHSYERS 329 (426)
T ss_dssp HHTTCSEEEECSSSSEEEE
T ss_pred HHhCCCEEEEcChhhheee
Confidence 9999999999999998764
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-20 Score=156.34 Aligned_cols=204 Identities=12% Similarity=0.036 Sum_probs=119.7
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
..+|||+++||+|++.. ..+.+.+.+++.+||+||++||+++.+. ..+.+...++.+.+
T Consensus 3 ~~~mri~~iSD~H~~~~--------------~~~~~~~~~~~~~~D~vi~~GDl~~~~~--~~~~~~~~~~~l~~----- 61 (228)
T 1uf3_A 3 RTVRYILATSNPMGDLE--------------ALEKFVKLAPDTGADAIALIGNLMPKAA--KSRDYAAFFRILSE----- 61 (228)
T ss_dssp CCCCEEEEEECCTTCHH--------------HHHHHHTHHHHHTCSEEEEESCSSCTTC--CHHHHHHHHHHHGG-----
T ss_pred cceEEEEEEeeccCCHH--------------HHHHHHHHHhhcCCCEEEECCCCCCCCC--CHHHHHHHHHHHHh-----
Confidence 34689999999998421 1123444455569999999999999763 23334444444432
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHHHh------CCC---CcceEEeC-CEEEEEEeceeccCCCCC---CCchhH
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAF------NSS---MVKLLSIK-GSYFVLINSMALEGDGCF---LCKPAQ 156 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~-~~~~i~lds~~~~~~~~~---~~~~~~ 156 (293)
.++|+++|+||||.... +.+...+ +.. ....+.++ +++|+++++......... ......
T Consensus 62 ~~~pv~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T 1uf3_A 62 AHLPTAYVPGPQDAPIW--------EYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 133 (228)
T ss_dssp GCSCEEEECCTTSCSHH--------HHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEH
T ss_pred cCCcEEEECCCCCchhH--------HHHHhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchh
Confidence 35799999999998421 1122221 110 12345566 899999876442111000 000001
Q ss_pred HHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhh
Q psy2930 157 DRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDY 236 (293)
Q Consensus 157 ~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 236 (293)
...+++.+.|+.. +..+.|+++|+|++.... ...+...+.+++++
T Consensus 134 ~~~~~~~~~l~~~-------------~~~~~il~~H~p~~~~~~----------------------~~~~~~~~~~~~~~ 178 (228)
T 1uf3_A 134 WVAEYRLKALWEL-------------KDYPKIFLFHTMPYHKGL----------------------NEQGSHEVAHLIKT 178 (228)
T ss_dssp HHHHHHHGGGGGS-------------CSCCEEEEESSCBCBTTT----------------------BTTSBHHHHHHHHH
T ss_pred hhHHHHHHHHHhC-------------CCCCeEEEEccCcccCCc----------------------cccCHHHHHHHHHH
Confidence 1112223333322 345889999999864311 01112356678888
Q ss_pred cCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEec
Q psy2930 237 LNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVE 285 (293)
Q Consensus 237 ~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~ 285 (293)
.+++++++||+| .... ..++...++.+|++ .++|.++++++
T Consensus 179 ~~~~~~~~GH~H-~~~~--~~~~~~~in~Gs~~-----~~~~~i~~~~~ 219 (228)
T 1uf3_A 179 HNPLLVLVAGKG-QKHE--MLGASWVVVPGDLS-----EGEYSLLDLRA 219 (228)
T ss_dssp HCCSEEEECCSS-CEEE--EETTEEEEECCBGG-----GTEEEEEETTT
T ss_pred hCCCEEEEcccc-cCcc--ccCCceEEEecccC-----CCceEEEEecc
Confidence 899999999999 3332 22467777777765 46899998865
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=160.79 Aligned_cols=219 Identities=13% Similarity=0.102 Sum_probs=123.3
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCCh-------------hhH--
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGG-------------EDF-- 75 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~-------------~~~-- 75 (293)
.+|||+++||+|++.. .+ +.+.+.++..+||+||++||+++.+....+ +++
T Consensus 4 ~~mri~~iSDlH~~~~-------~~-------~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~ 69 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFD-------LL-------PKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 69 (260)
T ss_dssp CCCEEEEEECCTTCGG-------GH-------HHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ceEEEEEEeecCCChH-------HH-------HHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhH
Confidence 4699999999999432 11 223444556799999999999997642100 000
Q ss_pred -----HHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC---------Ccce-EEeCCEEEEEEe
Q psy2930 76 -----DNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS---------MVKL-LSIKGSYFVLIN 140 (293)
Q Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~i~ld 140 (293)
...+..+.+.+. ..++|+++|+||||... ...+.+.+... .... +.+++++|++++
T Consensus 70 ~~~~~~~~~~~~l~~l~-~~~~pv~~v~GNHD~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~ 140 (260)
T 2yvt_A 70 NEHYIIETLDKFFREIG-ELGVKTFVVPGKNDAPL--------KIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFG 140 (260)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCSEEEEECCTTSCCH--------HHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHH-hcCCcEEEEcCCCCchh--------hhhHHHHhhhccCCcceEEecCcceEEECCEEEEecC
Confidence 011233333332 34689999999999742 11111121111 1234 778899999997
Q ss_pred ceeccCCCCCCCchh--HHHH--HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcc
Q psy2930 141 SMALEGDGCFLCKPA--QDRI--SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRK 216 (293)
Q Consensus 141 s~~~~~~~~~~~~~~--~~~l--~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~ 216 (293)
+..... ........ ..++ +|| +.++.. +..+.|+++|+|++....... + .
T Consensus 141 ~~~~~~-~~~~~~~~~~~~~~~~~~l-~~l~~~-------------~~~~~Il~~H~pp~~~~~d~~-~-~--------- 194 (260)
T 2yvt_A 141 GLLTEH-EFEEDFVLKYPRWYVEYIL-KFVNEL-------------KPRRLVTIFYTPPIGEFVDRT-P-E--------- 194 (260)
T ss_dssp SEEESS-CCBSSSSCEEEHHHHHHHG-GGGGGS-------------CCCEEEEEESSCCSCSSTTCB-T-T---------
T ss_pred CCcCCC-CcCHHHHhhcchhhHHHHH-HHHHhc-------------CCCCEEEEECCCccccccccC-c-c---------
Confidence 654211 11000000 0111 233 222221 345679999999864311100 0 0
Q ss_pred cccccccccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 217 KFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 217 ~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
.+...+...+.+++++++++++++||+| .... ..++...++.+|++. .+|.+++++++.+++
T Consensus 195 ----~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~--~~~~~~~in~Gs~~~-----g~~~ii~~~~~~~~~ 256 (260)
T 2yvt_A 195 ----DPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHE--LVGNTIVVNPGEFEE-----GRYAFLDLTQHKIKL 256 (260)
T ss_dssp ----BSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEE--EETTEEEEECCBGGG-----TEEEEEETTTTEEEE
T ss_pred ----cccccCcHHHHHHHHHhCCCEEEECCcc-CCcE--EeCCEEEEeCCCCCC-----CceEEEEEcCCEEEe
Confidence 0012233466788888899999999999 4332 224667778777653 289999998765544
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-21 Score=175.32 Aligned_cols=195 Identities=14% Similarity=0.164 Sum_probs=123.1
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCcc--CChhhHHHHHHHHHh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQY--VGGEDFDNYVRRFYS 84 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~--~~~~~~~~~~~~~~~ 84 (293)
.+..++||+++||+|.+.. . .+.+..+.+. .+||+||++||+++.... .....|..+.+.+..
T Consensus 115 ~~~~~~~f~~igD~~~~~~-------~-------~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~ 180 (424)
T 2qfp_A 115 GLDVPYTFGLIGDLGQSFD-------S-------NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER 180 (424)
T ss_dssp CTTCCEEEEEECSCTTBHH-------H-------HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEEeCCCCCC-------h-------HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHH
Confidence 3457899999999998421 0 0122222232 289999999999986431 112334443333333
Q ss_pred hhcCCCCceEEEecCCCCCCCCCCCC-chhHHHHHHHhCCC---------CcceEEeCCEEEEEEeceeccCCCCCCCch
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFHYRLH-PYLNDRFSRAFNSS---------MVKLLSIKGSYFVLINSMALEGDGCFLCKP 154 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 154 (293)
+. ..+|+++++||||........ ......|...|..+ .++.+..++++|++||+....+ .
T Consensus 181 ~~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~-------~ 250 (424)
T 2qfp_A 181 SV---AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYG-------R 250 (424)
T ss_dssp HH---TTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCS-------T
T ss_pred HH---hcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCC-------C
Confidence 33 468999999999986421110 11134555555422 3678999999999999864211 2
Q ss_pred hHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHH
Q psy2930 155 AQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLL 234 (293)
Q Consensus 155 ~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll 234 (293)
..+|++||++.|+..... ...++|+++|+|++....... .+. . .+ +..+.+++
T Consensus 251 ~~~Q~~WL~~~L~~~~~~----------~~~~~Iv~~H~P~~~~~~~~~--~~~-------------~-~~-r~~l~~ll 303 (424)
T 2qfp_A 251 GTPQYTWLKKELRKVKRS----------ETPWLIVLMHSPLYNSYNHHF--MEG-------------E-AM-RTKFEAWF 303 (424)
T ss_dssp TSHHHHHHHHHHHHCCTT----------TCCEEEEECSSCSSCCBSTTT--TTT-------------H-HH-HHHHHHHH
T ss_pred cHHHHHHHHHHHhhhccc----------CCCEEEEEeCcCceecCcccc--ccc-------------H-HH-HHHHHHHH
Confidence 247999999999875310 234689999999976432100 000 0 11 23577899
Q ss_pred hhcCccEEEecCCCCCcee
Q psy2930 235 DYLNPRLVIDGHTHNGCHK 253 (293)
Q Consensus 235 ~~~~~~lvl~GH~H~~~~~ 253 (293)
++++++++|+||+|.+...
T Consensus 304 ~~~~VdlvlsGH~H~y~r~ 322 (424)
T 2qfp_A 304 VKYKVDVVFAGHVHAYERS 322 (424)
T ss_dssp HHTTCSEEEECSSSSEEEE
T ss_pred HHhCCcEEEECChhhhhee
Confidence 9999999999999997654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-19 Score=160.77 Aligned_cols=232 Identities=13% Similarity=0.121 Sum_probs=122.5
Q ss_pred CCCCCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHh
Q psy2930 5 ASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYS 84 (293)
Q Consensus 5 ~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~ 84 (293)
+|+...++|||+++||+|++....+. ..+........+.+.+.+...+||+||++||+++.+... ...+....+.+.+
T Consensus 13 ~~~~~~~~mrilhiSD~Hlg~~~~~~-~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~-~~~~~~~~~~l~~ 90 (386)
T 3av0_A 13 GLVPRGSHMMFVHIADNHLGYRQYNL-DDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPP-VKALRIAMQAFKK 90 (386)
T ss_dssp -----CCCCEEEEECCCCBTCCGGGC-HHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCC-HHHHHHHHHHHHH
T ss_pred ccccCCCCeEEEEEccCCCCccccCc-chhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCC-HHHHHHHHHHHHH
Confidence 35567788999999999997542211 111111112334455555667999999999999976532 3334444444544
Q ss_pred hhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHH---hCCCCcceEEe--CCEEEEEEeceeccCCCCCCCchhHHHH
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRA---FNSSMVKLLSI--KGSYFVLINSMALEGDGCFLCKPAQDRI 159 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~i~lds~~~~~~~~~~~~~~~~~l 159 (293)
+. ..++|+++|+||||......... ....+... +... .+... +++.+++++... ........+++
T Consensus 91 L~--~~~~pv~~v~GNHD~~~~~~~~~-~~~~l~~~v~~l~~~--~v~~~~~~~v~i~gl~~~~-----~~~~~~~~~~l 160 (386)
T 3av0_A 91 LH--ENNIKVYIVAGNHEMPRRLGEES-PLALLKDYVKILDGK--DVINVNGEEIFICGTYYHK-----KSKREEMLDKL 160 (386)
T ss_dssp HH--HTTCEEEECCCGGGSCSSTTSCC-GGGGGTTTCEECSEE--EEEEETTEEEEEEEECCCC-----STTHHHHHHHH
T ss_pred HH--hcCCcEEEEcCCCCCCccccccC-HHHHHHHHeEEcCCC--cEEEeCCCCEEEEeCCCCC-----HHHHHHHHHHH
Confidence 43 24689999999999854221100 01111111 1111 11111 345666664321 01001112333
Q ss_pred HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCc
Q psy2930 160 SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNP 239 (293)
Q Consensus 160 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~ 239 (293)
.++...+. .+.+.|+++|.|+...... . + .+.... +. ++
T Consensus 161 ~~l~~~~~---------------~~~~~Ill~H~~~~~~~~~---~----------------~-~~~~~~----l~--~~ 199 (386)
T 3av0_A 161 KNFESEAK---------------NYKKKILMLHQGINPYIPL---D----------------Y-ELEHFD----LP--KF 199 (386)
T ss_dssp HHHHHHHH---------------TCSSEEEEECCCCTTTSSS---S----------------C-SSCGGG----SC--CC
T ss_pred HHhhhhcc---------------cCCCEEEEECcCccccCCC---C----------------c-ccCHHH----hh--hC
Confidence 33333222 4568899999998432110 0 0 011011 11 38
Q ss_pred cEEEecCCCCCceeeccCCCeeEEeccceeccC-C-------CCCceEEEEEec---CCceee
Q psy2930 240 RLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-K-------NNPSFLMGYVVE---NSSGVN 291 (293)
Q Consensus 240 ~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-~-------~~p~f~~~~~~~---~~~~~~ 291 (293)
+++++||+|.+... ..++...+..+|..... + ..+||.++++.+ +..+++
T Consensus 200 d~v~~GH~H~~~~~--~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~~~~~~~~v~ 260 (386)
T 3av0_A 200 SYYALGHIHKRILE--RFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIE 260 (386)
T ss_dssp SEEEECSCCSCEEE--ECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCSSSCCGGGEE
T ss_pred CeEEccCCCCCccc--cCCCceEEECCcccccCcchhccccCCCCEEEEEEEecCcCCCceEE
Confidence 99999999998532 22356677778775322 1 357999999987 444443
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=156.70 Aligned_cols=241 Identities=14% Similarity=0.045 Sum_probs=125.6
Q ss_pred CCCCceEEEEEecCCcCC----CCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCc-cCCCCccCChhhHHHHHHHH
Q psy2930 8 ESINNIKAIFIADTHLLG----PFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGD-LLDEGQYVGGEDFDNYVRRF 82 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GD-l~~~~~~~~~~~~~~~~~~~ 82 (293)
.+.+.|||+++||+|+|. ...+. .+........+.+.+.+++.+||+||++|| +++.+... .+....+.+.+
T Consensus 14 ~~~~~mrilh~SD~HlG~~~~~~~~~~--~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~-~~~~~~~~~~l 90 (336)
T 2q8u_A 14 INLKELKILHTSDWHLGVTSWTSSRPV--DRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS-VVALHDLLDYL 90 (336)
T ss_dssp TTCCEEEEEEEECCCBTCEECTTTCCE--ECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCC-HHHHHHHHHHH
T ss_pred eecCceEEEEECcccCCCCccccccCc--ChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCC-HHHHHHHHHHH
Confidence 566789999999999983 21111 011111234455666677789999999999 99876532 22233333444
Q ss_pred HhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC-----Ccce-----EEeCCEEEEEEeceeccCCCCCCC
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-----MVKL-----LSIKGSYFVLINSMALEGDGCFLC 152 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~i~lds~~~~~~~~~~~ 152 (293)
.++. .. +|+++++||||... ......+....+.. .... +..+++.|++++............
T Consensus 91 ~~L~--~~-~pv~~i~GNHD~~~-----~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 91 KRMM--RT-APVVVLPGNHDWKG-----LKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HHHH--HH-SCEEECCC-----------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCS
T ss_pred HHHH--hc-CCEEEECCCCCccc-----cccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 4433 12 69999999999853 11122232222311 0111 112456777774322100001112
Q ss_pred chhHHHHHHHHHHhhhcc-cCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHH
Q psy2930 153 KPAQDRISLISAKLKCCR-KDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTD 231 (293)
Q Consensus 153 ~~~~~~l~~l~~~l~~~~-~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 231 (293)
....++++|+.+.+.... . ++.+.|+++|.|+...... .... . +. . ..+..
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~-----------~~~~~Ill~H~~~~~~~~~--~~~~-------~--~~-~-~~v~~---- 214 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALK-----------KEDFAIFMGHFTVEGLAGY--AGIE-------Q--GR-E-IIINR---- 214 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHT-----------CSSEEEEEEESEETTCC-------------------C-C-CEECG----
T ss_pred HHHHHHHHHHHHHHHHhccC-----------CCCCEEEEECccccCCCCC--CCcc-------c--hh-h-cccCH----
Confidence 334567777777665421 1 4567899999998532210 0000 0 00 0 00111
Q ss_pred HHHhhcCccEEEecCCCCCceeeccCCCeeEEecccee---ccC-CCCCceEEEEEecCC-ceee
Q psy2930 232 MLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFS---WRN-KNNPSFLMGYVVENS-SGVN 291 (293)
Q Consensus 232 ~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~---~~~-~~~p~f~~~~~~~~~-~~~~ 291 (293)
. +...+++++++||+|..+.... +...+.++|.. +.. +..+||.++++++++ .+++
T Consensus 215 ~-l~~~~~d~v~~GH~H~~~~~~~---~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~~~~~~v~ 275 (336)
T 2q8u_A 215 A-LIPSVVDYAALGHIHSFREIQK---QPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYE 275 (336)
T ss_dssp G-GSCTTSSEEEEESCSSCEEEEE---TTEEEECCCSSCCSGGGTTCCCEEEEEEEETTSCCEEE
T ss_pred H-HccccCCEEEEccccCceEeCC---CccEEECCCCcCCCccccCCCCEEEEEEEeCCCccEEE
Confidence 1 2234799999999999987531 33556666653 222 236899999999764 4443
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-17 Score=141.40 Aligned_cols=219 Identities=14% Similarity=0.130 Sum_probs=123.9
Q ss_pred CCCCCCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHH
Q psy2930 4 PASPESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFY 83 (293)
Q Consensus 4 ~~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~ 83 (293)
|.+++....|||+++||+|...... +-.++|+||++||+++.+. .+++....+.+.
T Consensus 51 ~~~p~~~~~mri~~iSD~H~~~~~l---------------------~i~~~D~vi~aGDl~~~g~---~~e~~~~~~~L~ 106 (296)
T 3rl5_A 51 YDTPKPAGHTRFVCISDTRSRTDGI---------------------QMPYGDILLHTGDFTELGL---PSEVKKFNDWLG 106 (296)
T ss_dssp TTSCCCTTEEEEEEEBCCTTCCTTC---------------------CCCSCSEEEECSCCSSSCC---HHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEEeeCCCCcchh---------------------ccCCCCEEEECCcccCCCC---HHHHHHHHHHHH
Confidence 4455777889999999999854311 1247999999999999875 334444444444
Q ss_pred hhhcCCCCceEEEecCCCCCCCCCCCCc------hh---------HHHH---HHHhCCC---CcceEEeCCEEEEEEece
Q psy2930 84 SLFSTPDGTELHVVPGNHDMGFHYRLHP------YL---------NDRF---SRAFNSS---MVKLLSIKGSYFVLINSM 142 (293)
Q Consensus 84 ~~~~~~~~~~~~~v~GNHD~~~~~~~~~------~~---------~~~~---~~~~~~~---~~~~~~~~~~~~i~lds~ 142 (293)
++ ...++++|+||||.+.+..... .. .+.+ +..+... ......++|++|++....
T Consensus 107 ~l----~~~~v~~V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~t 182 (296)
T 3rl5_A 107 NL----PYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWT 182 (296)
T ss_dssp TS----CCSEEEECCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCB
T ss_pred hC----CCCeEEEEcCCcccccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCC
Confidence 32 2346899999999965311000 00 0000 0001111 135677899999885433
Q ss_pred eccCCCCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccc
Q psy2930 143 ALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRW 222 (293)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (293)
-..+. +.+ +....+++.+..... +....|+++|.|++...... . .. .
T Consensus 183 P~~~~-~~f---~~~~~~~~~~~~~~i-------------p~~~dILvTH~PP~g~~D~~-------~--~~-------~ 229 (296)
T 3rl5_A 183 PWFNG-WGF---NLPRGQSLLDKWNLI-------------PEGTDILMTHGPPLGFRDWV-------P--KE-------L 229 (296)
T ss_dssp CC--C-CTT---BCCTTHHHHHHHTTS-------------CTTCSEEEESSCBTTSSCEE-------G--GG-------T
T ss_pred CCCCC-cCC---CcchHHHHHHHHhhC-------------CCCCeEEEECCCcccccccc-------c--cc-------c
Confidence 22221 111 111122222222211 56678999999997643210 0 00 0
Q ss_pred cccCHHHHHHHH-hhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEe
Q psy2930 223 ECISKESTDMLL-DYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVV 284 (293)
Q Consensus 223 ~~l~~~~~~~ll-~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~ 284 (293)
..+....+.+.+ ++.+++++++||+|...... ..+++.+++.+|+.....+...=.++++.
T Consensus 230 ~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~-~~g~t~vvNpGs~~~~~~~~n~p~v~dl~ 291 (296)
T 3rl5_A 230 QRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM-TDGYTTYINASTCTVSFQPTNPPIIFDLP 291 (296)
T ss_dssp EECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-ECSSCEEEECBCSCTTSCCCSCCEEEEEE
T ss_pred CcCChHHHHHHHHHhcCCCEEEECCccCCCceE-EECCEEEEECCcCCcCcCCCCCCEEEEec
Confidence 123333455555 68899999999999986532 34578899999988765421112445544
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=143.30 Aligned_cols=233 Identities=14% Similarity=0.099 Sum_probs=121.2
Q ss_pred eEEEEEecCCcCCC----CCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccC-CCCccCChhhHHHHHHHHHhhhc
Q psy2930 13 IKAIFIADTHLLGP----FRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLL-DEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 13 ~ri~~iSD~H~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
|||+|+||+|+|.. ..+.. ....-....+.+.+.+...+||+||++||++ +.+. .....+..+.+.+..+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~--~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~-~~~~~~~~~~~~l~~l~- 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVD--RREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN-PSVVALHDLLDYLKRMM- 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEE--CHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSS-CCHHHHHHHHHHHHHHH-
T ss_pred CeEEEEcccCCCCCccccccCcC--hhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCC-CCHHHHHHHHHHHHHHH-
Confidence 79999999999876 22211 1111223445566666778999999999999 5433 23333444344444443
Q ss_pred CCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC-------CcceEE-eCC--EEEEEEeceeccCCCCCCCchhHH
Q psy2930 88 TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-------MVKLLS-IKG--SYFVLINSMALEGDGCFLCKPAQD 157 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~--~~~i~lds~~~~~~~~~~~~~~~~ 157 (293)
.. +|+++|+||||... ......+...+... ....+. .+| +.++++.- .............
T Consensus 77 -~~-~~v~~i~GNHD~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~---~~~~~~~~~~~~~ 146 (379)
T 3tho_B 77 -RT-APVVVLPGNQDWKG-----LKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPY---PDESEALRKNEGD 146 (379)
T ss_dssp -HH-SCEEECCCTTSCTT-----HHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECC---CCCC----CHHHH
T ss_pred -hC-CCEEEEcCCCcccc-----CccccccccccCCcceeecccceEEEEcCCCCEEEEEECCC---CCHHHHhhhhccc
Confidence 23 79999999999531 11122222212221 011121 123 55555521 1111111123445
Q ss_pred HHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc
Q psy2930 158 RISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL 237 (293)
Q Consensus 158 ~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~ 237 (293)
..+|+.+.++..... ...++.+.|+++|.++..... .+..... +. ..+... ++ ..
T Consensus 147 ~~~~l~~~l~~~~~~-------~~~~~~~~I~l~H~~v~g~~~-~~~se~~---------~~---~~v~~~----~~-~~ 201 (379)
T 3tho_B 147 FRFFLESRLNKLYEE-------ALKKEDFAIFMGHFTVEGLAG-YAGIEQG---------RE---IIINRA----LI-PS 201 (379)
T ss_dssp HHHHHHHHHHHHHHH-------HHTCSSEEEEEEESCBSCCCC-----------------CS---CCBCGG----GS-CT
T ss_pred hHHHHHHHHHHHHHH-------hcCCCCCeEEEEeccccCCcc-CCCCccc---------cc---cccCHH----Hc-Cc
Confidence 667777666521100 000456789999999853221 0000000 00 011111 11 23
Q ss_pred CccEEEecCCCCCceeeccCCCeeEEecccee---ccC-CCCCceEEEEEecCC
Q psy2930 238 NPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFS---WRN-KNNPSFLMGYVVENS 287 (293)
Q Consensus 238 ~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~---~~~-~~~p~f~~~~~~~~~ 287 (293)
+++++++||+|.+.... . +...+..+|.. +.. +..+||.++++.+++
T Consensus 202 ~~dyvalGH~H~~q~~~-~--~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~~~ 252 (379)
T 3tho_B 202 VVDYAALGHIHSFREIQ-K--QPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 252 (379)
T ss_dssp TSSEEEEESCSSCEEEE-E--TTEEEECCCSSCCSGGGSSSCCEEEEEECCSSS
T ss_pred CCCEEEcccccCCeEeC-C--CCcEEecCCCCCCCcccccCCCEEEEEEEcCCC
Confidence 79999999999996542 1 23566666652 222 236899999998765
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=132.86 Aligned_cols=61 Identities=18% Similarity=0.087 Sum_probs=46.5
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-----CCCCceEEEEEecCCceee
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-----KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-----~~~p~f~~~~~~~~~~~~~ 291 (293)
.+.++++..+++++++||+|...... .+++..++.+|++... ...++|.+++++++++++.
T Consensus 108 ~l~~~~~~~~~d~vi~GHtH~~~~~~--~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~~~~~ 173 (192)
T 1z2w_A 108 SLALLQRQFDVDILISGHTHKFEAFE--HENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTY 173 (192)
T ss_dssp HHHHHHHHHSSSEEECCSSCCCEEEE--ETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEE
T ss_pred HHHHHHHhcCCCEEEECCcCcCccEe--ECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCEEEEE
Confidence 45566666789999999999997643 3478899999986522 2468999999998776654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-17 Score=134.85 Aligned_cols=168 Identities=14% Similarity=0.093 Sum_probs=104.0
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
.|||+++||+|++.... .+. +.+.+.++..++|+|+++||+++ .+.++.++++ +
T Consensus 25 ~m~i~~iSD~H~~~~~~-~l~----------~~l~~~~~~~~~D~vi~~GDl~~----------~~~l~~l~~~-----~ 78 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK-ELP----------SNFRELLATDKINYVLCTGNVCS----------QEYVEMLKNI-----T 78 (215)
T ss_dssp CEEEEEECCCCTTTTCS-SCC----------GGGHHHHHCTTCCEEEECSCCCC----------HHHHHHHHHH-----C
T ss_pred CcEEEEEecCCCCCChH-HHH----------HHHHHHHhcCCCCEEEECCCCCC----------HHHHHHHHHc-----C
Confidence 48999999999964321 111 11233344578999999999996 1224444443 3
Q ss_pred ceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhccc
Q psy2930 92 TELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRK 171 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~ 171 (293)
.|+++|+||||...... . . +|+. .+....
T Consensus 79 ~~v~~V~GNHD~~~~~~-~-------------~-----------------------------------~~~~-~lp~~~- 107 (215)
T 2a22_A 79 KNVYIVSGDLDSAIFNP-D-------------P-----------------------------------ESNG-VFPEYV- 107 (215)
T ss_dssp SCEEECCCTTCCSCCBC-C-------------G-----------------------------------GGTB-CCCSEE-
T ss_pred CCEEEecCCCcCccccc-C-------------h-----------------------------------hhHh-hCCceE-
Confidence 58999999999853210 0 0 0000 000000
Q ss_pred CCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCc
Q psy2930 172 DRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGC 251 (293)
Q Consensus 172 ~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~ 251 (293)
....+...|+++|.+++.... +.+.+.++++..+++++++||+|...
T Consensus 108 --------~~~~~~~~i~l~Hg~~~~~~~-------------------------~~~~l~~~~~~~~~d~vl~GHtH~~~ 154 (215)
T 2a22_A 108 --------VVQIGEFKIGLMHGNQVLPWD-------------------------DPGSLEQWQRRLDCDILVTGHTHKLR 154 (215)
T ss_dssp --------EEEETTEEEEEECSTTSSSTT-------------------------CHHHHHHHHHHHTCSEEEECSSCCCE
T ss_pred --------EEecCCeEEEEEcCCccCCCC-------------------------CHHHHHHHHhhcCCCEEEECCcCCCc
Confidence 000234678999966532110 12245566667789999999999987
Q ss_pred eeeccCCCeeEEeccceecc----C-CCCCceEEEEEecCCceee
Q psy2930 252 HKYHAYGKVHEYTVPSFSWR----N-KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 252 ~~~~~~~~~~~~~~~s~~~~----~-~~~p~f~~~~~~~~~~~~~ 291 (293)
... .+++..++.+|++.. . ...++|.+++++++++++.
T Consensus 155 ~~~--~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~~~~i~~~ 197 (215)
T 2a22_A 155 VFE--KNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLY 197 (215)
T ss_dssp EEE--ETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEE
T ss_pred cEe--eCCEEEEECCcccccCCCCCCCCCCcEEEEEEeCCcEEEE
Confidence 643 347889999998642 2 2468999999998876654
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-15 Score=137.91 Aligned_cols=238 Identities=12% Similarity=0.017 Sum_probs=127.0
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhh--
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL-- 85 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~-- 85 (293)
.+.+.|||+|+||+|++....+.... .......+.+.+.+.+.+||+||++|||++.+... .+......+.+++.
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~~~~~~--~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps-~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEKDPVRG--NDSFVSFNEILEIARERDVDMILLGGDIFHDNKPS-RKALYQALRSLRLNCL 148 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTT--THHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCC-HHHHHHHHHHHHHHHB
T ss_pred CCCCCeEEEEEecccCCCcccCcccc--hhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCC-HHHHHHHHHHHHHhcc
Confidence 56778999999999998765332110 11223445566677778999999999999976643 34444445555441
Q ss_pred ---------hc--------------------CCCCceEEEecCCCCCCCCCCCCchhHHHHHH-----HhCCCC------
Q psy2930 86 ---------FS--------------------TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSR-----AFNSSM------ 125 (293)
Q Consensus 86 ---------~~--------------------~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~-----~~~~~~------ 125 (293)
+. ...++||++|+||||....... ......+.. .++...
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~-~s~~~LL~~~g~v~l~g~~~~~d~i~ 227 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YSALDILQVTGLVNYFGRVPENDNIV 227 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--C-CCHHHHHHHTTSCEECCCCSCSSSEE
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccccc-ccHHHHhccCCcEEEeCCcccCCcee
Confidence 11 0248999999999998532111 011222211 122210
Q ss_pred --cceEEeCCEEEEEEeceeccCCCCCCCchhHHHH-HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCC
Q psy2930 126 --VKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRI-SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEE 202 (293)
Q Consensus 126 --~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l-~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~ 202 (293)
+..+..++..+.+ .|.++. ..+.+ ..+.+.......+. ....+...|+++|........
T Consensus 228 ~~pv~l~kg~~~val------yGl~y~----~d~rl~r~~~e~~v~~~~p~------~~~~~~~nIlvlH~~~~~~~~-- 289 (472)
T 4fbk_A 228 VSPILLQKGFTKLAL------YGISNV----RDERLYHSFRENKVKFLRPD------LYRDEWFNLLTVHQNHSAHTP-- 289 (472)
T ss_dssp ECCEEEEETTEEEEE------EECCCC----CHHHHHHHHHTTCEEEEEES------TTGGGEEEEEEEESCSCCSST--
T ss_pred EEEEEEEeCCceEEE------EecCCC----chhhhhhhhhhhhhhhhCcc------cccCCceEEEEecCCccCCCc--
Confidence 0112222222211 232221 11222 12221111111000 000345689999988743321
Q ss_pred CCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee--ccCCCeeEEecccee---cc--CCCC
Q psy2930 203 CSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY--HAYGKVHEYTVPSFS---WR--NKNN 275 (293)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~--~~~~~~~~~~~~s~~---~~--~~~~ 275 (293)
.+. +.. . +...++++|+.||+|...... .+.++...+..+|.. .. ..+.
T Consensus 290 ---~~y----------------ipe----~-ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~ 345 (472)
T 4fbk_A 290 ---TSY----------------LPE----S-FIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAP 345 (472)
T ss_dssp ---TSS----------------CCG----G-GSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSC
T ss_pred ---ccc----------------CCh----h-hhhcCCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCCCC
Confidence 111 111 1 122379999999999998653 233467788888753 22 1247
Q ss_pred CceEEEEEecCCceee
Q psy2930 276 PSFLMGYVVENSSGVN 291 (293)
Q Consensus 276 p~f~~~~~~~~~~~~~ 291 (293)
+||.+++++++.+.++
T Consensus 346 kg~~lveI~~~~v~ve 361 (472)
T 4fbk_A 346 KHCGILNITGKDFHLE 361 (472)
T ss_dssp CEEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCEEEEE
Confidence 8999999998776654
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-15 Score=136.43 Aligned_cols=238 Identities=11% Similarity=0.007 Sum_probs=125.5
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhh--
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL-- 85 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~-- 85 (293)
.+.+.|||+|+||+|++....+.... ...+...+.+.+.+.+.+||+||++|||++.+... .+......+.+++.
T Consensus 9 ~~~~~mrilhiSDlHLg~~~~~~~~~--~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~-~~~~~~~~~~lr~~~~ 85 (417)
T 4fbw_A 9 HNENTIRILISSDPHVGYGEKDPVRG--NDSFVSFNEILEIARERDVDMILLGGDIFHDNKPS-RKALYQALRSLRLNCL 85 (417)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTT--THHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCC-HHHHHHHHHHHHHHHB
T ss_pred CCCCCeEEEEEEcCCCCCcccccccc--hhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCC-HHHHHHHHHHHHHhcc
Confidence 45677999999999998764332111 11223445566777778999999999999976643 33444444555441
Q ss_pred ---------hc--------------------CCCCceEEEecCCCCCCCCCCCCchhHHHHHH-----HhCCCC------
Q psy2930 86 ---------FS--------------------TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSR-----AFNSSM------ 125 (293)
Q Consensus 86 ---------~~--------------------~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~-----~~~~~~------ 125 (293)
+. ...++||++++||||....... ......+.. .++...
T Consensus 86 g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~-~s~~~lL~~~g~v~l~g~~~~~~~i~ 164 (417)
T 4fbw_A 86 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YSALDILQVTGLVNYFGRVPENDNIV 164 (417)
T ss_dssp SSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C-CCHHHHHHHTTSCEECCCCC---CEE
T ss_pred cCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc-ccHHHHhccCCeEEEeCCcccCCcee
Confidence 11 0248999999999998532111 011122211 122210
Q ss_pred --cceEEeCCEEEEEEeceeccCCCCCCCchhHHHH-HHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCC
Q psy2930 126 --VKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRI-SLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEE 202 (293)
Q Consensus 126 --~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l-~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~ 202 (293)
...+..++..+.+ .|.++. ..+.+ ..+.+.......+. ....+...|+++|........
T Consensus 165 ~~pv~l~~g~~~val------yG~~~~----~d~rl~r~~~~~~v~~~~p~------~~~~~~~nIlvlH~~~~~~~~-- 226 (417)
T 4fbw_A 165 VSPILLQKGFTKLAL------YGISNV----RDERLYHSFRENKVKFLRPD------LYRDEWFNLLTVHQNHSAHTP-- 226 (417)
T ss_dssp ECCEEEEETTEEEEE------EEECCC----CHHHHHHHHHTTCEEEEEES------TTTTTSEEEEEEESCSSCSSS--
T ss_pred EEeEEEEecCceEEE------EeccCC----chhhhhhhhhhhhhhhcCcc------cccCCceEEEEecCCccCCCC--
Confidence 0111222221111 222211 11222 12221111111000 001456789999988743321
Q ss_pred CCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee--ccCCCeeEEeccceec-cC----CCC
Q psy2930 203 CSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY--HAYGKVHEYTVPSFSW-RN----KNN 275 (293)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~--~~~~~~~~~~~~s~~~-~~----~~~ 275 (293)
... +.. . +...++++|+.||+|...... ...++...+..+|... +. .+.
T Consensus 227 ---~~y----------------ip~----~-l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~ 282 (417)
T 4fbw_A 227 ---TSY----------------LPE----S-FIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAP 282 (417)
T ss_dssp ---SSS----------------CCG----G-GSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSC
T ss_pred ---ccc----------------Cch----h-HhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCccccCCC
Confidence 111 111 1 222379999999999998653 2344778888888642 22 157
Q ss_pred CceEEEEEecCCceee
Q psy2930 276 PSFLMGYVVENSSGVN 291 (293)
Q Consensus 276 p~f~~~~~~~~~~~~~ 291 (293)
+||.++++.++.+.++
T Consensus 283 kg~~lvei~~~~~~~e 298 (417)
T 4fbw_A 283 KHCGILNITGKDFHLE 298 (417)
T ss_dssp CEEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCEEEEE
Confidence 8999999998776654
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-16 Score=132.74 Aligned_cols=209 Identities=8% Similarity=-0.022 Sum_probs=111.2
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH---hc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA---LH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF 86 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 86 (293)
+|||+++||+|.. ... + +++.+.++ .. ++|.||++||+++.+. ...+. ++.+.++.
T Consensus 1 mm~i~~isD~H~~-------~~~------l-~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~--~~~~~---~~~l~~l~ 61 (252)
T 1nnw_A 1 MVYVAVLANIAGN-------LPA------L-TAALSRIEEMREEGYEIEKYYILGNIVGLFP--YPKEV---IEVIKDLT 61 (252)
T ss_dssp -CEEEEEECCTTC-------HHH------H-HHHHHHHHHHHHTTCCEEEEEEESCSSSSSS--CHHHH---HHHHHHHH
T ss_pred CcEEEEEeecCCC-------HHH------H-HHHHHHHHhhhhccCCCCEEEEeCccCCCCC--CHHHH---HHHHHhhH
Confidence 4899999999961 111 1 12233333 45 7999999999999775 22222 33344332
Q ss_pred cCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCc-ceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHH
Q psy2930 87 STPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMV-KLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAK 165 (293)
Q Consensus 87 ~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~ 165 (293)
. ..++++|+||||....... ...+.... .....++.. . ....+......+++++||++.
T Consensus 62 ~---~~~~~~v~GNhD~~~~~~~---------~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 62 K---KENVKIIRGKYDQIIAMSD---------PHATDPGYIDKLELPGHV---K-----KALKFTWEKLGHEGREYLRDL 121 (252)
T ss_dssp H---HSCEEEECCHHHHHHHHSC---------TTCSSSGGGGGSSCCHHH---H-----HHHHHHHHHHHHHHHHHHHTS
T ss_pred h---hcCeeEEecchHHHhhccc---------cccCCcccccchhhhHHH---H-----HHHHHHHHHCCHHHHHHHHhC
Confidence 1 1479999999997320000 00000000 000000000 0 000000112445677777652
Q ss_pred hhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEe
Q psy2930 166 LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVID 244 (293)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~ 244 (293)
...... ..+...|+++|+++....... .. .....+.+.+++++. +++++++
T Consensus 122 p~~~~~----------~~~~~~i~~~H~~p~~~~~~~--~~----------------~~~~~~~l~~~~~~~~~~~~vi~ 173 (252)
T 1nnw_A 122 PIYLVD----------KIGGNEVFGVYGSPINPFDGE--VL----------------AEQPTSYYEAIMRPVKDYEMLIV 173 (252)
T ss_dssp CSCEEE----------EETTEEEEEESSCSSCTTTCC--CC----------------SSCCHHHHHHHHGGGTTSSEEEE
T ss_pred CceEEE----------eeCCcEEEEEcCCCCCCcccc--cC----------------CCCCHHHHHHHHhcCCCCCEEEE
Confidence 211100 013457899999874221100 00 011234567788888 8999999
Q ss_pred cCCCCCceeeccCCCeeEEeccceeccCC--CCCceEEEEEecCCce
Q psy2930 245 GHTHNGCHKYHAYGKVHEYTVPSFSWRNK--NNPSFLMGYVVENSSG 289 (293)
Q Consensus 245 GH~H~~~~~~~~~~~~~~~~~~s~~~~~~--~~p~f~~~~~~~~~~~ 289 (293)
||+|...... .+++..++++|++.... +.++|.++++++..++
T Consensus 174 GHtH~~~~~~--~~~~~~in~Gs~~~~~~~~~~~~y~il~~~~~~v~ 218 (252)
T 1nnw_A 174 ASPMYPVDAM--TRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPK 218 (252)
T ss_dssp STTCSEEEEE--ETTEEEEEECCSSSCSSSSCCEEEEEEETTTCCEE
T ss_pred CCccccceEe--cCCeEEEECCCccCCCCCCCcceEEEEECCCCeEE
Confidence 9999987653 24788899988775433 3568998887664443
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-15 Score=138.12 Aligned_cols=244 Identities=11% Similarity=0.137 Sum_probs=145.0
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccC------------------C
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYV------------------G 71 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~------------------~ 71 (293)
..++||+++||.+..... ... +.. +.+.+||+||++||.+...... +
T Consensus 114 ~~~~rfa~~sc~~~~~g~----~~~----------~~~-ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~t 178 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGY----YTA----------YKH-MAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIIT 178 (527)
T ss_dssp CCCEEEEEECCCCGGGCC----CHH----------HHH-HTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCS
T ss_pred CCCeEEEEEecCCCCCCc----cHH----------HHH-HHhcCCCEEEecCCcccCCCCCcccccccccccCCcccccC
Confidence 367999999999873221 111 111 2346999999999999643211 1
Q ss_pred hhhHHHHHHH------HHhhhcCCCCceEEEecCCCCCCCCCCCC------ch------hHHHHHHHh---CC-------
Q psy2930 72 GEDFDNYVRR------FYSLFSTPDGTELHVVPGNHDMGFHYRLH------PY------LNDRFSRAF---NS------- 123 (293)
Q Consensus 72 ~~~~~~~~~~------~~~~~~~~~~~~~~~v~GNHD~~~~~~~~------~~------~~~~~~~~~---~~------- 123 (293)
.+.|...++. ++.+. ..+|++++.||||+....... +. ....++.+| +.
T Consensus 179 l~~yr~~y~~~~~dp~lq~~~---a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~ 255 (527)
T 2yeq_A 179 LQDYRNRHAQYRSDANLKAAH---AAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPN 255 (527)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH---HHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCB
T ss_pred HHHHHHHHHHHhCCHHHHHHH---hcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 1223333322 22222 358999999999996432111 00 001233333 21
Q ss_pred ----CCcceEEeCC-EEEEEEeceeccCCCC---------------CCCchhHHHHHHHHHHhhhcccCCCCCccccCCC
Q psy2930 124 ----SMVKLLSIKG-SYFVLINSMALEGDGC---------------FLCKPAQDRISLISAKLKCCRKDRECPKSMKLGS 183 (293)
Q Consensus 124 ----~~~~~~~~~~-~~~i~lds~~~~~~~~---------------~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~ 183 (293)
..|+.+.+++ ++|++||+..+..... .-.-...+|++||++.|+.+ .
T Consensus 256 ~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s-------------~ 322 (527)
T 2yeq_A 256 GPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS-------------T 322 (527)
T ss_dssp TTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC-------------C
T ss_pred CCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC-------------C
Confidence 1367899999 9999999987543210 01124679999999999875 4
Q ss_pred CCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCcc--EEEecCCCCCceee--ccC--
Q psy2930 184 YSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPR--LVIDGHTHNGCHKY--HAY-- 257 (293)
Q Consensus 184 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~--lvl~GH~H~~~~~~--~~~-- 257 (293)
..++||++|+|++...... +.. .. .+ ...| .+| ...++.+.++|.+++++ ++|+||.|...... ...
T Consensus 323 a~W~Iv~s~~p~~~~~~~~-g~~--~~-~~-~D~W-~g~-~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~ 395 (527)
T 2yeq_A 323 AHWNVLAQQIFFAKWNFGT-SAS--PI-YS-MDSW-DGY-PAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEK 395 (527)
T ss_dssp SSEEEEECSSCCSCCCSSC-SSS--CC-EE-TTSG-GGS-HHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTC
T ss_pred CCeEEEEeCCcccccccCC-Ccc--cc-cC-ccch-hcc-HHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccC
Confidence 5688999999997653211 100 00 00 0011 111 22355777888888874 99999999997632 111
Q ss_pred --CC--eeEEeccceeccC-C---------------------CCCceEEEEEecCCceee
Q psy2930 258 --GK--VHEYTVPSFSWRN-K---------------------NNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 258 --~~--~~~~~~~s~~~~~-~---------------------~~p~f~~~~~~~~~~~~~ 291 (293)
.+ ..++++++++... + ...||.+++|+++.+++.
T Consensus 396 p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~ 455 (527)
T 2yeq_A 396 TSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTVTPHQWKAD 455 (527)
T ss_dssp TTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEEEEEEEETTEEEEE
T ss_pred CCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCEEEEEEeccEEEEE
Confidence 11 5788777664321 0 134899999999876654
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.5e-16 Score=125.72 Aligned_cols=170 Identities=12% Similarity=0.010 Sum_probs=99.7
Q ss_pred CCCCCCCCc-eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHH
Q psy2930 4 PASPESINN-IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRF 82 (293)
Q Consensus 4 ~~~~~~~~~-~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~ 82 (293)
|.+|.+.+. |||+++||+|. . .. ..+++.+.++..++|+|+++||+++. +.++.+
T Consensus 16 ~~~~~~~~g~m~i~~iSD~Hg-~------~~-------~l~~~l~~~~~~~~D~ii~~GDl~~~----------~~~~~l 71 (190)
T 1s3l_A 16 TTENLYFQGHMKIGIMSDTHD-H------LP-------NIRKAIEIFNDENVETVIHCGDFVSL----------FVIKEF 71 (190)
T ss_dssp ----------CEEEEECCCTT-C------HH-------HHHHHHHHHHHSCCSEEEECSCCCST----------HHHHHG
T ss_pred cccChhhcCCeEEEEEeeCCC-C------HH-------HHHHHHHHHhhcCCCEEEECCCCCCH----------HHHHHH
Confidence 455666564 99999999994 1 11 11233344556799999999999861 123333
Q ss_pred HhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHH
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLI 162 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l 162 (293)
.+ .+.|+++|+||||... ..+.+.+..... .. +... .
T Consensus 72 ~~-----l~~~~~~V~GNhD~~~---------~~~~~~~~~~~~-----~~--l~~~--------------~-------- 108 (190)
T 1s3l_A 72 EN-----LNANIIATYGNNDGER---------CKLKEWLKDINE-----EN--IIDD--------------F-------- 108 (190)
T ss_dssp GG-----CSSEEEEECCTTCCCH---------HHHHHHHHHHCT-----TC--EEES--------------E--------
T ss_pred Hh-----cCCCEEEEeCCCcchH---------HHHHHHhcccCh-----hh--hccc--------------c--------
Confidence 32 2579999999999752 111111111000 00 0000 0
Q ss_pred HHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccE
Q psy2930 163 SAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRL 241 (293)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~l 241 (293)
..+. .+...|+++|.|+.. +.+.+.+. ++++
T Consensus 109 -~~~~---------------~~~~~ill~Hg~~~~--------------------------------l~~~~~~~~~~d~ 140 (190)
T 1s3l_A 109 -ISVE---------------IDDLKFFITHGHHQS--------------------------------VLEMAIKSGLYDV 140 (190)
T ss_dssp -EEEE---------------ETTEEEEEEESCCHH--------------------------------HHHHHHHHSCCSE
T ss_pred -eEEe---------------eCCcEEEEECCChHH--------------------------------HHHHHHhcCCCCE
Confidence 0011 235679999988621 22334444 8999
Q ss_pred EEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 242 VIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 242 vl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
+++||+|.+.... .+++..++.+|++.+.+..++|.++++.++++++
T Consensus 141 vl~GHtH~~~~~~--~~~~~~iNpGs~~~r~~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 141 VIYGHTHERVFEE--VDDVLVINPGECCGYLTGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp EEEECSSCCEEEE--ETTEEEEECCCSSCTTTSCCEEEEEETTTTEEEE
T ss_pred EEECCCCCcceEE--ECCEEEEECCcccccCCCCCEEEEEEcCCCcEEE
Confidence 9999999998653 3478899999987733356899999998776554
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-15 Score=133.87 Aligned_cols=235 Identities=15% Similarity=0.061 Sum_probs=125.8
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhh-
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLF- 86 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~- 86 (293)
...+.|||+++||+|++......... .......+.+.+.+.+.+||+||++||+++.+.. ..+.+....+.++++.
T Consensus 28 ~~~~~mrilhiSDlHLg~~~~~~~~~--~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~-~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 28 DDENTFKILVATDIHLGFMEKDAVRG--NDTFVTLDEILRLAQENEVDFILLGGDLFHENKP-SRKTLHTCLELLRKYCM 104 (431)
T ss_dssp CGGGEEEEEEECCCCBTTTSSCTTTT--THHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSC-CHHHHHHHHHHHHHHHB
T ss_pred CCCCCEEEEEEeccCCCCcccccchh--hhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCC-CHHHHHHHHHHHHHHhc
Confidence 45567999999999998765432111 1122344556667778899999999999997653 2344445455555431
Q ss_pred ----------c--------------------CCCCceEEEecCCCCCCCCCCCCchhHHHHH-----HHhCCCC-c----
Q psy2930 87 ----------S--------------------TPDGTELHVVPGNHDMGFHYRLHPYLNDRFS-----RAFNSSM-V---- 126 (293)
Q Consensus 87 ----------~--------------------~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~-----~~~~~~~-~---- 126 (293)
. ...++|+++|+||||......... ..+.+. .+|+... .
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~-~~~lL~~~glv~~fg~~~~~e~i~ 183 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALC-ALDILSCAGFVNHFGRSMSVEKID 183 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBC-HHHHHHHHTSEEECCCCCCSSCEE
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccC-HHHHhccCCcEEEECCcCccccee
Confidence 0 024899999999999853211111 122221 1233210 0
Q ss_pred ---ceEEeCC--EEEEEEeceeccCCCCCCCchhHHHHHHHHHH--hhhcccCCCCCccccCCCCCCCEEeeccCCCcCC
Q psy2930 127 ---KLLSIKG--SYFVLINSMALEGDGCFLCKPAQDRISLISAK--LKCCRKDRECPKSMKLGSYSQPIILQHFPLYRES 199 (293)
Q Consensus 127 ---~~~~~~~--~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~--l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~ 199 (293)
..+..++ +.++++ ++ ...+.+..+... ++... + . ...++.+.|+++|......+
T Consensus 184 ~~Pv~l~~g~~~valyGl--------~~----~~~~~l~~~~~~~~v~~~~-p----~--~~~~~~~~Ilv~H~~~~~~g 244 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGL--------GS----IPDERLYRMFVNKKVTMLR-P----K--EDENSWFNLFVIHQNRSKHG 244 (431)
T ss_dssp ECCEEEEETTEEEEEEEE--------CC----CCHHHHHHHHHTTCEEECC-C----S--SCGGGEEEEEEECSCCSCSS
T ss_pred eEEEEEecCCEeEEEEeC--------CC----CCHHHHhhhhccccceeec-c----c--ccCCCceEEEEECCCccCCC
Confidence 0111233 222222 11 112222221111 11000 0 0 00034578999999773221
Q ss_pred CCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceee--ccCCCeeEEeccceecc-C----
Q psy2930 200 DEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKY--HAYGKVHEYTVPSFSWR-N---- 272 (293)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~--~~~~~~~~~~~~s~~~~-~---- 272 (293)
. .+. +.. .+ ...++++|+.||+|...... .+.++...+..+|.... .
T Consensus 245 ~-----~~~----------------ip~----~l-~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E 298 (431)
T 3t1i_A 245 S-----TNF----------------IPE----QF-LDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGE 298 (431)
T ss_dssp S-----SSS----------------CCG----GG-SCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHH
T ss_pred c-----ccc----------------CCH----hH-hhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCccc
Confidence 1 111 111 11 12268999999999998643 12346777888875432 1
Q ss_pred CCCCceEEEEEecCCceee
Q psy2930 273 KNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 273 ~~~p~f~~~~~~~~~~~~~ 291 (293)
...+||.+++++++.+.++
T Consensus 299 ~~~k~~~lvei~~~~~~ve 317 (431)
T 3t1i_A 299 AVKKHVGLLRIKGRKMNMH 317 (431)
T ss_dssp HSCCEEEEEEEETTEEEEE
T ss_pred CCCCEEEEEEEECCEEEEE
Confidence 2467999999998766554
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=135.46 Aligned_cols=192 Identities=15% Similarity=0.093 Sum_probs=109.7
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
+.|||+++||+|.. . .. + +++.+.+. ++|.|+++||+++.+. .. .+.++.+.++-
T Consensus 2 ~~mri~~isDiHg~-~------~~------l-~~~l~~~~--~~d~ii~~GDl~~~g~--~~---~~~~~~l~~~~---- 56 (246)
T 3rqz_A 2 NAMRILIISDVHAN-L------VA------L-EAVLSDAG--RVDDIWSLGDIVGYGP--RP---RECVELVRVLA---- 56 (246)
T ss_dssp CCCCEEEECCCTTC-H------HH------H-HHHHHHHC--SCSEEEECSCCSSSSS--CH---HHHHHHHHHHC----
T ss_pred CCcEEEEEeecCCC-H------HH------H-HHHHHhcc--CCCEEEECCCcCCCCC--CH---HHHHHHHHhcC----
Confidence 46999999999951 1 11 1 22233333 8999999999999776 22 23344444431
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcc
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCR 170 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~ 170 (293)
.+++|+||||......... ..+. ................++++||+......
T Consensus 57 --~~~~v~GNhD~~~~~~~~~---~~~~----------------------~~~~~~~~~~~~~l~~~~~~~L~~lp~~~- 108 (246)
T 3rqz_A 57 --PNISVIGNHDWACIGRLSL---DEFN----------------------PVARFASYWTTMQLQAEHLQYLESLPNRM- 108 (246)
T ss_dssp --SSEECCCHHHHHHTCCCCC---C--C----------------------GGGGCHHHHHHHHCCHHHHHHHHHCCSEE-
T ss_pred --CCEEEeCchHHHHhccCCc---cccC----------------------HHHHHHHHHHHHHcCHHHHHHHHhCCcEE-
Confidence 2599999999742110000 0000 00000000000123356777777532211
Q ss_pred cCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 171 KDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 171 ~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
....++++|.++...... .........+++++.+++++|+||+|.+
T Consensus 109 -------------~~~~i~~~Hg~p~~~~~~---------------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 109 -------------IDGDWTVVHGSPRHPIWE---------------------YIYNARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp -------------EETTEEEESSCSSSTTTC---------------------CCCSHHHHHHHGGGCCSSEEECCSSSSE
T ss_pred -------------EECCEEEEECCcCCcccc---------------------ccCChHHHHHHHhccCCCEEEECCcCcc
Confidence 123789999887432110 1223346678889999999999999998
Q ss_pred ceeec-------------------cCCCeeEEeccceeccCC--CCCceEEEEEecCCce
Q psy2930 251 CHKYH-------------------AYGKVHEYTVPSFSWRNK--NNPSFLMGYVVENSSG 289 (293)
Q Consensus 251 ~~~~~-------------------~~~~~~~~~~~s~~~~~~--~~p~f~~~~~~~~~~~ 289 (293)
..... -..+...++++|+..... +..+|.+++.....++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg~p~A~Y~i~d~~~~~v~ 214 (246)
T 3rqz_A 155 LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVT 214 (246)
T ss_dssp EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSSCCSEEEEEEEGGGTEEE
T ss_pred cEEEecccccccccccccccceeecCCCeEEEECCccCCCCCcCCcceEEEEECCCCEEE
Confidence 75431 012478899999875443 3458999987765444
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=9.2e-16 Score=131.25 Aligned_cols=210 Identities=12% Similarity=0.091 Sum_probs=114.1
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhc
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
..-.++||+++||+|.. +. ..+++.+.++..++|.|+++||+++.|.. . .+.++.++++
T Consensus 7 ~~~~~~~i~~iSDiHg~-------~~-------~l~~vl~~~~~~~~D~ii~~GDlv~~g~~--~---~~~~~~l~~~-- 65 (270)
T 3qfm_A 7 HHMDMTKIALLSDIHGN-------TT-------ALEAVLADARQLGVDEYWLLGDILMPGTG--R---RRILDLLDQL-- 65 (270)
T ss_dssp ----CEEEEEECCCTTC-------HH-------HHHHHHHHHHHTTCCEEEECSCCSSSSSC--S---HHHHHHHHTS--
T ss_pred ccccccEEEEEecCCCC-------HH-------HHHHHHHHHHhcCCCEEEEcCCCCCCCCC--H---HHHHHHHHcc--
Confidence 34467899999999961 11 12334455566789999999999998763 1 2223334332
Q ss_pred CCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhh
Q psy2930 88 TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLK 167 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~ 167 (293)
.|+++|+||||.... ......++.......... .... +....+.+++++||+..-.
T Consensus 66 ----~~~~~v~GNhD~~~~--------~~~~~~~~~~~~~~~~~~-------~~~~-----~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 66 ----PITARVLGNWEDSLW--------HGVRKELDSTRPSQRYLL-------RQCQ-----YVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp ----CEEEECCCHHHHHHH--------HHHTTCSCTTSHHHHHHH-------HHHH-----HHHTTSCHHHHHHHHSCCS
T ss_pred ----CCEEEEcCChHHHHH--------HhhccccCCCcHHHHHHH-------HHHH-----HHHHHcCHHHHHHHHhCCC
Confidence 278999999997420 000000000000000000 0000 0001234566777764321
Q ss_pred hcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCC
Q psy2930 168 CCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHT 247 (293)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~ 247 (293)
.... .-+...|+++|..+...-..... ..-..+.+.++++..+++++|+||+
T Consensus 122 ~~~~----------~~~g~~i~lvHg~p~~~~~~~~~------------------~~~~~~~l~~~~~~~~~d~~i~GHt 173 (270)
T 3qfm_A 122 QIHR----------QFGDLTVGISHHLPDKNWGRELI------------------HTGKQEEFDRLVTHPPCDIAVYGHI 173 (270)
T ss_dssp EEEE----------EETTEEEEEESSBTTBSSSSTTS------------------TTCCHHHHHHTTTTTTCSEEECCSS
T ss_pred ceEE----------EECCcEEEEEECCCCCCCCceec------------------CCCcHHHHHHHhcccCCCEEEECCc
Confidence 1100 01345788999776432110000 0111234566677778999999999
Q ss_pred CCCceeeccCCCeeEEeccceeccCC--------CCCceEEEEEecCC-ceee
Q psy2930 248 HNGCHKYHAYGKVHEYTVPSFSWRNK--------NNPSFLMGYVVENS-SGVN 291 (293)
Q Consensus 248 H~~~~~~~~~~~~~~~~~~s~~~~~~--------~~p~f~~~~~~~~~-~~~~ 291 (293)
|.+..... .++...++.+|++.... +.++|.++++++++ .+|+
T Consensus 174 H~~~~~~~-~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~ 225 (270)
T 3qfm_A 174 HQQLLRYG-TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMD 225 (270)
T ss_dssp CSEEEEEC-TTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEE
T ss_pred CchHheec-cCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEE
Confidence 98876432 24788999999885432 25799999999875 3444
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-14 Score=125.82 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=56.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++||+|++...... ..+...-....+.+.+.+.+.+||+||++||+++.+.. ..+.+....+.+.++. ..++
T Consensus 1 mkilh~sD~Hlg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~-~~~~~~~~~~~l~~l~--~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP-SPGTLKKAIALLQIPK--EHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC-CHHHHHHHHHHHHHHH--TTTC
T ss_pred CEEEEEcccCCCCcccCC-chhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCC-CHHHHHHHHHHHHHHH--HCCC
Confidence 799999999997642111 11111111233445566667899999999999996543 2333444444444443 3578
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
|+++|+||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999985
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-15 Score=117.38 Aligned_cols=61 Identities=15% Similarity=0.035 Sum_probs=46.8
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceecc-CCC-CCceEEEEEecCCceee
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWR-NKN-NPSFLMGYVVENSSGVN 291 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~-~~~-~p~f~~~~~~~~~~~~~ 291 (293)
.+.+++++.+++++++||+|...... .+++..++.+|++.. .+. .++|.+++++++++++.
T Consensus 96 ~l~~~~~~~~~d~vi~GHtH~~~~~~--~~~~~~inpGs~~~~~~~~~~~~y~il~~~~~~~~v~ 158 (176)
T 3ck2_A 96 KLDYWAQEEEAAICLYGHLHVPSAWL--EGKILFLNPGSISQPRGTIRECLYARVEIDDSYFKVD 158 (176)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--ETTEEEEEECCSSSCCTTCCSCCEEEEEECSSEEEEE
T ss_pred HHHHHHHhcCCCEEEECCcCCCCcEE--ECCEEEEECCCCCcCCCCCCCCeEEEEEEcCCEEEEE
Confidence 45677777899999999999997643 247888999887743 333 38999999998776654
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-15 Score=121.69 Aligned_cols=169 Identities=18% Similarity=0.157 Sum_probs=94.6
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh--cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL--HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
.|||+++||+|++....... ..+.....+.+.+.+.+++ .++|+|+++||+++.+. ..... .+.+.++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~--~~~~~---~~~l~~l---- 70 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINL-NPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN--DKNEY---LRIWKAL---- 70 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHH-STTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC--CTTSH---HHHHHHS----
T ss_pred CcEEEEEeccccCCCccccc-cCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCch--hHHHH---HHHHHHC----
Confidence 48999999999975421110 0111001233445555555 48999999999998752 22222 2333332
Q ss_pred CCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhc
Q psy2930 90 DGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCC 169 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~ 169 (293)
+.|+++|+||||... ..+. .. .. .+ . ++.+ ++.
T Consensus 71 -~~~~~~v~GNhD~~~---------~~~~----~~-~~----------~l-----~------------~~~~----l~~- 103 (195)
T 1xm7_A 71 -PGRKILVMGNHDKDK---------ESLK----EY-FD----------EI-----Y------------DFYK----IIE- 103 (195)
T ss_dssp -SSEEEEECCTTCCCH---------HHHT----TT-CS----------EE-----E------------SSEE----EEE-
T ss_pred -CCCEEEEeCCCCCch---------hhhh----hh-hh----------ch-----h------------HHHH----HHh-
Confidence 248999999999742 1111 10 00 00 0 0000 110
Q ss_pred ccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCC
Q psy2930 170 RKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHN 249 (293)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~ 249 (293)
.+...|+++|+|+....... | ..+.+.+.+++++.+++++++||+|.
T Consensus 104 -------------~~~~~i~~~H~~~~~~~~~~-------------------~-~~~~~~l~~~~~~~~~~~vi~GHtH~ 150 (195)
T 1xm7_A 104 -------------HKGKRILLSHYPAKDPITER-------------------Y-PDRQEMVREIYFKENCDLLIHGHVHW 150 (195)
T ss_dssp -------------ETTEEEEEESSCSSCSSCCS-------------------C-HHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred -------------cCCcEEEEEccCCcCCCccc-------------------c-cchHHHHHHHHHHcCCcEEEECCcCC
Confidence 12457999999985432110 0 11124567778888999999999999
Q ss_pred Cceeec--cCC-CeeEEeccceec
Q psy2930 250 GCHKYH--AYG-KVHEYTVPSFSW 270 (293)
Q Consensus 250 ~~~~~~--~~~-~~~~~~~~s~~~ 270 (293)
...... ..+ +++.+++++-.+
T Consensus 151 ~~~~~~~g~~~~g~~~~nvg~~~~ 174 (195)
T 1xm7_A 151 NREGIKCACKDYRIECINANVEWN 174 (195)
T ss_dssp CSCC--CCTTSSSCCEEECBGGGT
T ss_pred CCcccccccccCCcceEEEeEecc
Confidence 976432 112 566788776443
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.1e-14 Score=111.39 Aligned_cols=49 Identities=18% Similarity=0.161 Sum_probs=39.4
Q ss_pred cCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCceeee
Q psy2930 237 LNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 237 ~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~~~ 292 (293)
.+++++++||+|.+.... .+++..++.+|++. ++|.+++++++++++++
T Consensus 127 ~~~d~vi~GHtH~~~~~~--~~~~~~iNpGS~~~-----~sy~il~~~~~~~~~~~ 175 (178)
T 2kkn_A 127 EKPQVILFGHTHEPEDTV--KAGVRFLNPGSLAE-----GSYAVLELDGGEVRFEL 175 (178)
T ss_dssp SCCSEEECCSCSSCCEEE--ETTEEEECCCCTTT-----TEEEEEEEETTEEEEEE
T ss_pred cCCCEEEECccCCCCeEE--eCCEEEEECCCCCC-----CeEEEEEECCCEEEEEE
Confidence 478999999999997643 24788888888653 89999999998877764
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.3e-13 Score=109.20 Aligned_cols=77 Identities=23% Similarity=0.253 Sum_probs=48.6
Q ss_pred CCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCC-hhh--HHHHHHHHHhh
Q psy2930 9 SINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVG-GED--FDNYVRRFYSL 85 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~-~~~--~~~~~~~~~~~ 85 (293)
+.+.||++++||+|... . ..+++.+.++..++|.|+++||+++.+.... ..+ ..+..+.+.+
T Consensus 22 ~~~mmki~~iSD~H~~~-------~-------~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~- 86 (208)
T 1su1_A 22 SNAMMKLMFASDIHGSL-------P-------ATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE- 86 (208)
T ss_dssp ---CCEEEEECCCTTBH-------H-------HHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT-
T ss_pred ccccEEEEEEEcCCCCH-------H-------HHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHh-
Confidence 34458999999999721 1 1233444555578999999999998765211 111 2333444443
Q ss_pred hcCCCCceEEEecCCCCCC
Q psy2930 86 FSTPDGTELHVVPGNHDMG 104 (293)
Q Consensus 86 ~~~~~~~~~~~v~GNHD~~ 104 (293)
.+.|+++|+||||..
T Consensus 87 ----~~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 87 ----VAHKVIAVRGNCDSE 101 (208)
T ss_dssp ----TGGGEEECCCTTCCH
T ss_pred ----cCCceEEEECCCchH
Confidence 236899999999973
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-09 Score=102.03 Aligned_cols=89 Identities=11% Similarity=-0.024 Sum_probs=46.7
Q ss_pred CCCceEEEEEecCCcCCCCCCchhHH-----HHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChhhHHHHHHHH
Q psy2930 9 SINNIKAIFIADTHLLGPFRGHWFDK-----LRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGEDFDNYVRRF 82 (293)
Q Consensus 9 ~~~~~ri~~iSD~H~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~~~~~~~~~~ 82 (293)
....++|+++||+|...... .+... .. .......+.+.+++..|| +++.+||+++.....+........+.+
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~-~~~~~~~~~~~g-g~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~l 103 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPV-ELTLSGEKTPVG-GVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFM 103 (552)
T ss_dssp --CEEEEEEECCCTTCCSCE-EEECSSSEEEEC-CHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccc-cccCcccccccC-CHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHH
Confidence 44569999999999642211 00000 00 001122344455566787 889999999864321111112223333
Q ss_pred HhhhcCCCCceEEEecCCCCCCC
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
.. + +. -++++||||+.+
T Consensus 104 n~-l----g~-d~~~lGNHEfd~ 120 (552)
T 2z1a_A 104 HR-L----RY-RAMALGNHEFDL 120 (552)
T ss_dssp HH-T----TC-CEEECCGGGGTT
T ss_pred Hh-c----CC-CccccccccccC
Confidence 33 2 22 378999999865
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4e-09 Score=98.16 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=44.8
Q ss_pred CCceEEEEEecCCcCCCCCC--ch-hHHHHhHHHHHHHHHHHHHhcCC-CEEEEcCccCCCCccCChhhHHHHHHHHHhh
Q psy2930 10 INNIKAIFIADTHLLGPFRG--HW-FDKLRREWQMYKTFQTAVALHQP-EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL 85 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~p-d~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~ 85 (293)
...++|+++||+|....... .+ +.++. .+.+.+.+.....+| ++++.+||++...............+.+..
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~---~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~- 81 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQK---TLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNL- 81 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHH---HHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHH-
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHH---HHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhc-
Confidence 34699999999998532211 00 11111 122222222112246 799999999875331110111222333333
Q ss_pred hcCCCCceEEEecCCCCCCC
Q psy2930 86 FSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 86 ~~~~~~~~~~~v~GNHD~~~ 105 (293)
+ + +-++++||||+.+
T Consensus 82 l----g-~d~~~~GNHEfd~ 96 (516)
T 1hp1_A 82 V----G-YDAMAIGNHEFDN 96 (516)
T ss_dssp H----T-CCEEECCGGGGSS
T ss_pred c----C-CCEEeeccccccC
Confidence 2 2 2378999999965
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=96.09 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=42.7
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTP 89 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (293)
+.+|++++||+|.. ... + .++.+.+.. .++|.|+++||+++.|... .+.+ +.+.
T Consensus 11 ~~~~i~visDiHg~-------~~~------l-~~~l~~~~~~~~~d~~i~~GD~~~~g~~~--------~~~~-~~l~-- 65 (221)
T 1g5b_A 11 KYRNIWVVGDLHGC-------YTN------L-MNKLDTIGFDNKKDLLISVGDLVDRGAEN--------VECL-ELIT-- 65 (221)
T ss_dssp GCSCEEEECCCTTC-------HHH------H-HHHHHHHTCCTTTCEEEECSCCSSSSSCH--------HHHH-GGGG--
T ss_pred CCceEEEEEcCCCC-------HHH------H-HHHHHHccCCCCCCEEEEeCCccCCCCCh--------HHHH-HHHh--
Confidence 45899999999951 111 1 122222332 3689999999999977521 1122 2221
Q ss_pred CCceEEEecCCCCCC
Q psy2930 90 DGTELHVVPGNHDMG 104 (293)
Q Consensus 90 ~~~~~~~v~GNHD~~ 104 (293)
..++++|+||||..
T Consensus 66 -~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 66 -FPWFRAVRGNHEQM 79 (221)
T ss_dssp -STTEEECCCHHHHH
T ss_pred -cCCEEEEccCcHHH
Confidence 24799999999963
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.2e-09 Score=97.04 Aligned_cols=203 Identities=15% Similarity=0.112 Sum_probs=105.7
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-----------hcCCCEEEEcCccCCCCccCCh------
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-----------LHQPEHIFVLGDLLDEGQYVGG------ 72 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~pd~vi~~GDl~~~~~~~~~------ 72 (293)
.+..+++++||+|+|+..... ... .+.|.+++. ..+...||++||+++...+..+
T Consensus 198 ~~~~~ialVSGL~igs~~~~~-~~~-------~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~ 269 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGES-LLG-------TQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAK 269 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHH-HHH-------HHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC------------
T ss_pred CCCCEEEEECCcccCCCcccc-hHH-------HHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhh
Confidence 455799999999998764210 111 122333332 2478999999999996421110
Q ss_pred -----------hhHHHHHHHHHhhhcCCCCceEEEecCCCCCCCCC-CCCchhHHHHHHH--h----CCCCcceEEeCCE
Q psy2930 73 -----------EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHY-RLHPYLNDRFSRA--F----NSSMVKLLSIKGS 134 (293)
Q Consensus 73 -----------~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~-~~~~~~~~~~~~~--~----~~~~~~~~~~~~~ 134 (293)
+++.. ++.|..-+ ...+||.++|||||-.... ...+.....|... + .-.+++.+.++|+
T Consensus 270 y~~~~~~~~~~~~~~~-ld~~L~~l--~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~ 346 (476)
T 3e0j_A 270 YLTKKTQAASVEAVKM-LDEILLQL--SASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGV 346 (476)
T ss_dssp -CHHHHHHHHHHHHHH-HHHHHHHH--HTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTE
T ss_pred ccccccchhhHHHHHH-HHHHHHhc--ccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCE
Confidence 12222 23332222 3689999999999975321 1111111222221 1 1235789999999
Q ss_pred EEEEEeceeccCC-CCCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhh
Q psy2930 135 YFVLINSMALEGD-GCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIE 213 (293)
Q Consensus 135 ~~i~lds~~~~~~-~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~ 213 (293)
+|++..+....-- .+.. .+..++.++..|+.. |..|.......|.+.. +
T Consensus 347 ~~LgtsGqnidDi~ky~~---~~~~l~~me~~Lkwr----------------------HlAPTaPdTl~~yP~~-----~ 396 (476)
T 3e0j_A 347 RFLGTSGQNVSDIFRYSS---MEDHLEILEWTLRVR----------------------HISPTAPDTLGCYPFY-----K 396 (476)
T ss_dssp EEEECSSHHHHHHHHHSC---CCCHHHHHHHHHHBT----------------------CSCTTSCCC------C-----C
T ss_pred EEEEECCCCHHHHHhcCC---CCCHHHHHHHHHHHh----------------------ccCCCCCCceeeccCC-----C
Confidence 9999633222100 0000 112455555555432 4333221212222210 0
Q ss_pred hcccccccccccCHHHHHHHHhhcCccEEEecCCCCCceeec--cC-CCeeEEecccee
Q psy2930 214 KRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCHKYH--AY-GKVHEYTVPSFS 269 (293)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~--~~-~~~~~~~~~s~~ 269 (293)
++ +.++ +.-|+++|+||.|....... .. ..+..+++|+|+
T Consensus 397 ~D------pfVi----------~~~PhVyf~Gnq~~f~t~~~~~~~~~~vrLv~VP~Fs 439 (476)
T 3e0j_A 397 TD------PFIF----------PECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFS 439 (476)
T ss_dssp SC------TTSC----------SSCCSEEEEEEESSCEEEEEECSSCCEEEEEEEECHH
T ss_pred CC------ceee----------cCCCcEEEeCCCCccceeEEecCCCCeEEEEEcCCcC
Confidence 00 1222 11599999999999987542 22 258999999987
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-08 Score=93.94 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=47.2
Q ss_pred CCceEEEEEecCCcCCCCCCc-hhHH-HH--hHHHHHHHHHHHHHhcCCCEEEE-cCccCCCCccCChhhHHHHHHHHHh
Q psy2930 10 INNIKAIFIADTHLLGPFRGH-WFDK-LR--REWQMYKTFQTAVALHQPEHIFV-LGDLLDEGQYVGGEDFDNYVRRFYS 84 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~~~~~pd~vi~-~GDl~~~~~~~~~~~~~~~~~~~~~ 84 (293)
...++|+++||+|..-..... +... .. -.......+.+.+++..|+.+++ +||+++............ +.+
T Consensus 4 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~----~~~ 79 (509)
T 3ive_A 4 AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKA----IID 79 (509)
T ss_dssp CEEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHH----HHH
T ss_pred ceEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChH----HHH
Confidence 456999999999954322110 0000 00 00112233455556678888877 999998532111011122 223
Q ss_pred hhcCCCCceEEEecCCCCCCCC
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+. ..+.. ++++||||+.++
T Consensus 80 ~ln-~lg~D-~~tlGNHEfd~G 99 (509)
T 3ive_A 80 IMN-TMPFD-AVTIGNHEFDHG 99 (509)
T ss_dssp HHT-TSCCS-EECCCGGGGTTC
T ss_pred HHH-hcCCc-EEeecccccccC
Confidence 332 22333 678999998653
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.2e-08 Score=92.25 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=45.9
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhH-H--HHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCC-h----hhHHHH
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFD-K--LRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVG-G----EDFDNY 78 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~-~----~~~~~~ 78 (293)
.+.+.++|+++||+|....... +.. . ..-......++.+.+++..|+ +++.+||+++...... . ......
T Consensus 15 ~~~~~l~Il~tnD~Hg~~~~~~-~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 15 FQGSNIAFYVVSDVHGYIFPTD-FTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp ---CEEEEEEECCCTTCCSSCC-SSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred cCCCcEEEEEEeccCCCccCcc-cccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 4557899999999996432111 000 0 000001122344445556676 6777999998543110 0 001233
Q ss_pred HHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 79 VRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+.+.. .+.. ++++||||+.++
T Consensus 94 ~~~ln~-----lg~D-~~t~GNHefd~G 115 (527)
T 3qfk_A 94 VDFYNR-----MAFD-FGTLGNHEFNYG 115 (527)
T ss_dssp HHHHHH-----TCCC-EECCCGGGGTTC
T ss_pred HHHHHh-----cCCc-EEeccccccccC
Confidence 333333 2333 678999998653
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=8.8e-08 Score=89.63 Aligned_cols=88 Identities=11% Similarity=0.019 Sum_probs=46.3
Q ss_pred CceEEEEEecCCcCCCCCCchhH-------HHHhHHHHHHHHHHHHHhcCC-CEEEEcCccCCCCccCChhhHHHHHHHH
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFD-------KLRREWQMYKTFQTAVALHQP-EHIFVLGDLLDEGQYVGGEDFDNYVRRF 82 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p-d~vi~~GDl~~~~~~~~~~~~~~~~~~~ 82 (293)
.+++|+++||+|........... ... ...-...+.+.+++..| +++|.+||+++.....+........+.+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~g-G~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMG-GVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBC-CHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccC-CHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45999999999964322110000 000 00112233444555556 6999999999965421111112333333
Q ss_pred HhhhcCCCCceEEEecCCCCCCC
Q psy2930 83 YSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 83 ~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
..+ +.. ++++||||+.+
T Consensus 103 n~l-----g~d-~~~~GNHEfd~ 119 (546)
T 4h2g_A 103 NAL-----RYD-AMALGNHEFDN 119 (546)
T ss_dssp HHH-----TCS-EEECCGGGGTT
T ss_pred Hhc-----CCc-EEeccCccccc
Confidence 332 223 68899999864
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.86 E-value=6.9e-08 Score=90.48 Aligned_cols=54 Identities=13% Similarity=0.080 Sum_probs=29.2
Q ss_pred HHHHHHhc--C--CC-EEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCCCC
Q psy2930 45 FQTAVALH--Q--PE-HIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 45 ~~~~~~~~--~--pd-~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
+.+.+++. + || +++.+||+++..............+.+ ..+ +.++ ++ ||||+.+
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~l-n~l----g~d~-~~-GNHEfd~ 168 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQ-NLV----GVDH-MV-SHWEWTL 168 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHH-HHH----TCCE-EC-CSGGGGG
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHH-Hhh----CCcE-Ee-cchhccc
Confidence 44444444 4 88 899999999854311100012223333 333 3454 47 9999854
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=2.6e-07 Score=86.96 Aligned_cols=88 Identities=10% Similarity=0.057 Sum_probs=45.3
Q ss_pred CceEEEEEecCCcCCCCCC-ch-hH------HHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChhhHHHHHHH
Q psy2930 11 NNIKAIFIADTHLLGPFRG-HW-FD------KLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGEDFDNYVRR 81 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~-~~-~~------~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~~~~~~~~~ 81 (293)
-.++|++++|+|..-.... .+ .. ... ...-..++.+.+++..++ ++|.+||++..........-....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~g-G~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIG-GFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEEC-CHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccC-CHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 3599999999995432211 00 00 000 011122344445555666 88999999986532111111223333
Q ss_pred HHhhhcCCCCceEEEecCCCCCCC
Q psy2930 82 FYSLFSTPDGTELHVVPGNHDMGF 105 (293)
Q Consensus 82 ~~~~~~~~~~~~~~~v~GNHD~~~ 105 (293)
+.. + +.. ++++||||+.+
T Consensus 90 ln~-l----g~D-~~tlGNHEfd~ 107 (579)
T 3ztv_A 90 MNA-G----NFH-YFTLGNHEFDA 107 (579)
T ss_dssp HHH-H----TCS-EEECCSGGGTT
T ss_pred HHh-c----CcC-eeecccccccc
Confidence 333 2 222 68899999864
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=86.42 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=50.3
Q ss_pred CCCCCCCCCCceEEEEEecCCcCCCCCC---chhHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChh--hH
Q psy2930 2 NWPASPESINNIKAIFIADTHLLGPFRG---HWFDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGE--DF 75 (293)
Q Consensus 2 ~w~~~~~~~~~~ri~~iSD~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~--~~ 75 (293)
.-|..+.....++|++++|+|....... .+...+..-..+...+.+..++.+|+ +++.+||++.+....... .-
T Consensus 5 s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g 84 (557)
T 3c9f_A 5 SFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNG 84 (557)
T ss_dssp CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTT
T ss_pred cCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCC
Confidence 3455456667799999999998543211 11000110011323333333346788 479999999753211000 00
Q ss_pred HHHHHHHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 76 DNYVRRFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
....+.+ .. .+.. ++++||||+.++
T Consensus 85 ~~~~~~l-n~----lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 85 LKSTPIF-IK----QDYD-LLTIGNHELYLW 109 (557)
T ss_dssp TTTHHHH-TT----SCCS-EECCCGGGSSSH
T ss_pred HHHHHHH-Hh----cCCC-EEeecchhcccc
Confidence 1112222 22 2333 678899999753
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.35 E-value=5.2e-05 Score=70.57 Aligned_cols=85 Identities=11% Similarity=0.106 Sum_probs=43.3
Q ss_pred ceEEEEEecCCcCCCCCC----ch------hHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccCChhhHHHHHH
Q psy2930 12 NIKAIFIADTHLLGPFRG----HW------FDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYVGGEDFDNYVR 80 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~~~~~~~~~~~ 80 (293)
+++|++++|+|..-.... .. ..-+. ++ .++.+.+++..|+ ++|.+||++......+...-....+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~a---rl-at~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~ 78 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVA---RL-FTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAH 78 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHH---HH-HHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHH---HH-HHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHH
Confidence 379999999996432110 00 00011 11 2233344445555 6777999998644221111122222
Q ss_pred HHHhhhcCCCCceEEEecCCCCCCCC
Q psy2930 81 RFYSLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 81 ~~~~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.+ ..+ +.- ++++||||+.++
T Consensus 79 ~m-N~l----gyD-a~~lGNHEFd~G 98 (530)
T 4h1s_A 79 FM-NAL----RYD-AMALGNHEFDNG 98 (530)
T ss_dssp HH-HHT----TCC-EEECCGGGGTTT
T ss_pred HH-hcc----CCC-EEEEchhhhccC
Confidence 23 333 211 789999999764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=98.35 E-value=3e-06 Score=77.91 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=36.9
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCceee-ccCC-CeeEEeccceeccCCCCCceEEEEEecCCc
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCHKY-HAYG-KVHEYTVPSFSWRNKNNPSFLMGYVVENSS 288 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~-~~~~-~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~ 288 (293)
.+.+...+.+++.++++++.||.+...-+. ...+ -++++.+|.-|...++. -.++.|..+++
T Consensus 384 fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~--~~~~~~~~~~~ 447 (477)
T 1wao_1 384 FGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNK--ASYIHLQGSDL 447 (477)
T ss_dssp ECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCE--EEEEEEETTEE
T ss_pred ECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCcc--EEEEEEECCCC
Confidence 456778899999999999999999875432 1121 23444444434333332 34455544433
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.31 E-value=2.5e-05 Score=68.38 Aligned_cols=57 Identities=9% Similarity=-0.023 Sum_probs=30.5
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHH--hHHHHHHHHHHHHHhcCCC-EEEEcCccCCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLR--REWQMYKTFQTAVALHQPE-HIFVLGDLLDEG 67 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~ 67 (293)
-.++|++++|+|..-.......+... -...-..++.+.+++..++ ++|.+||++.+.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs 66 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGS 66 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCc
Confidence 45899999999974332110000000 0001122344445555565 778999999743
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.3e-05 Score=68.77 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=29.7
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHH--hHHHHHHHHHHHHHhcCCC-EEEEcCccCCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLR--REWQMYKTFQTAVALHQPE-HIFVLGDLLDEG 67 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~ 67 (293)
-.++|++++|+|..-.......+... -...-..++.+.+++..++ ++|.+||++.+.
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs 69 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN 69 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc
Confidence 35899999999975332110000000 0001112334444555555 667899999754
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.6e-06 Score=73.31 Aligned_cols=66 Identities=26% Similarity=0.359 Sum_probs=41.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCC-CEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQP-EHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-d~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
+|++++||+|. .. .. + .++.+.+...++ |.+|++||+++.|... . +.++.+.+
T Consensus 19 ~~i~visDiHg-~~------~~------l-~~~l~~~~~~~~~d~ii~~GD~vd~g~~~--~---~~l~~l~~------- 72 (262)
T 2qjc_A 19 GRVIIVGDIHG-CR------AQ------L-EDLLRAVSFKQGSDTLVAVGDLVNKGPDS--F---GVVRLLKR------- 72 (262)
T ss_dssp SCEEEECCCTT-CH------HH------H-HHHHHHHTCCTTTSEEEECSCCSSSSSCH--H---HHHHHHHH-------
T ss_pred CeEEEEeCCCC-CH------HH------H-HHHHHHHhccCCCCEEEEecCCCCCCCCH--H---HHHHHHHH-------
Confidence 49999999994 11 11 1 223333344455 9999999999977521 1 22332322
Q ss_pred ceEEEecCCCCCC
Q psy2930 92 TELHVVPGNHDMG 104 (293)
Q Consensus 92 ~~~~~v~GNHD~~ 104 (293)
.++++|+||||..
T Consensus 73 ~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 73 LGAYSVLGNHDAK 85 (262)
T ss_dssp HTCEECCCHHHHH
T ss_pred CCCEEEeCcChHH
Confidence 3689999999963
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.1e-06 Score=74.94 Aligned_cols=67 Identities=27% Similarity=0.488 Sum_probs=41.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
||++++||+|.. ... + ..+.+.+.. .++|.++++||+++.|... .+.++.+.++ +
T Consensus 1 M~i~vigDiHG~-------~~~------l-~~ll~~~~~~~~~d~~v~lGD~vdrG~~s-----~~~l~~l~~l-----~ 56 (280)
T 2dfj_A 1 MATYLIGDVHGC-------YDE------L-IALLHKVEFTPGKDTLWLTGDLVARGPGS-----LDVLRYVKSL-----G 56 (280)
T ss_dssp -CEEEECCCCSC-------HHH------H-HHHHHHTTCCTTTCEEEECSCCSSSSSCH-----HHHHHHHHHT-----G
T ss_pred CeEEEEecCCCC-------HHH------H-HHHHHHhCCCCCCCEEEEeCCcCCCCCcc-----HHHHHHHHhC-----C
Confidence 689999999961 111 1 112222232 3679999999999987621 1223333332 2
Q ss_pred ceEEEecCCCCC
Q psy2930 92 TELHVVPGNHDM 103 (293)
Q Consensus 92 ~~~~~v~GNHD~ 103 (293)
.++++|.||||.
T Consensus 57 ~~~~~v~GNHe~ 68 (280)
T 2dfj_A 57 DSVRLVLGNHDL 68 (280)
T ss_dssp GGEEECCCHHHH
T ss_pred CceEEEECCCcH
Confidence 379999999996
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=98.07 E-value=6.3e-05 Score=64.86 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=37.3
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCce--eeccCCCeeEEeccceeccCCCCCceEEEEEecCCc
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCH--KYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSS 288 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~--~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~ 288 (293)
.+.+...+.|++.+.++++=||.=...- ..+...-++++.+|.-|...+|.. .++.+.++.+
T Consensus 231 fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~--a~~~~~~~~~ 294 (315)
T 3h63_A 231 FGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKA--SYIHLQGSDL 294 (315)
T ss_dssp ECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCE--EEEEEETTEE
T ss_pred ECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccE--EEEEEECCCC
Confidence 4566889999999999999999975432 222221345555555554444433 4445554444
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.4e-05 Score=70.13 Aligned_cols=48 Identities=21% Similarity=0.404 Sum_probs=30.4
Q ss_pred CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCceEEEecCCCCC
Q psy2930 53 QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDM 103 (293)
Q Consensus 53 ~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 103 (293)
++|.++++||+++.|.. ..+....+.++..... ..+.+++++.||||.
T Consensus 105 ~~d~~v~lGD~vdrG~~--s~evl~~l~~l~~~~~-~~~~~v~~v~GNHE~ 152 (342)
T 2z72_A 105 GEGHMVMTGDIFDRGHQ--VNEVLWFMYQLDQQAR-DAGGMVHLLMGNHEQ 152 (342)
T ss_dssp TTCEEEECSCCSSSSSC--HHHHHHHHHHHHHHHH-HTTCEEEECCCHHHH
T ss_pred CCCEEEEECCCcCCCCC--HHHHHHHHHHHHHHHh-hCCCeEEEEecCCcH
Confidence 47999999999998763 2233333333321000 124579999999997
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0004 Score=58.83 Aligned_cols=74 Identities=18% Similarity=0.134 Sum_probs=44.7
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDG 91 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (293)
.|||++++|+|.. + + . ..+...+.+..++.++|++++.||....|.... ...++.+..+ +
T Consensus 4 ~m~ilf~GDv~G~-~--G--~------~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~----~~~~~~ln~~-----G 63 (281)
T 1t71_A 4 SIKFIFLGDVYGK-A--G--R------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS----LKHYEFLKEA-----G 63 (281)
T ss_dssp CCEEEEECEEBHH-H--H--H------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC----HHHHHHHHHH-----T
T ss_pred eEEEEEECCcCCh-H--H--H------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-----C
Confidence 5999999999952 1 1 0 112223333333447899999999887665333 2333334332 3
Q ss_pred ceEEEecCCCCCCCC
Q psy2930 92 TELHVVPGNHDMGFH 106 (293)
Q Consensus 92 ~~~~~v~GNHD~~~~ 106 (293)
.- .++.|||++.+.
T Consensus 64 ~D-a~TlGNHefD~g 77 (281)
T 1t71_A 64 VN-YITMGNHTWFQK 77 (281)
T ss_dssp CC-EEECCTTTTCCG
T ss_pred CC-EEEEccCcccCC
Confidence 33 677799999764
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.89 E-value=2.3e-05 Score=67.58 Aligned_cols=72 Identities=14% Similarity=0.226 Sum_probs=43.6
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
++++++||+|. . +. . +. .+.+.+....++.++++||+++.|..+ .+......++... .+-
T Consensus 50 ~~i~viGDIHG-----~-~~-~------L~-~ll~~~~~~~~~~~vflGD~VDRG~~s--~evl~lL~~lk~~----~p~ 109 (309)
T 2ie4_C 50 CPVTVCGDVHG-----Q-FH-D------LM-ELFRIGGKSPDTNYLFMGDYVDRGYYS--VETVTLLVALKVR----YRE 109 (309)
T ss_dssp SSEEEECCCTT-----C-HH-H------HH-HHHHHHCCTTTSCEEECSCCSSSSTTH--HHHHHHHHHHHHH----CTT
T ss_pred CCEEEEecCCC-----C-HH-H------HH-HHHHHcCCCCCCEEEEeCCccCCCCCh--HHHHHHHHHHHhh----CCC
Confidence 67999999997 1 11 1 11 122233334678889999999988632 2222333333222 133
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
.++.+.||||..
T Consensus 110 ~v~~lrGNHE~~ 121 (309)
T 2ie4_C 110 RITILRGNHESR 121 (309)
T ss_dssp TEEECCCTTSST
T ss_pred cEEEEeCCCCHH
Confidence 689999999985
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.80 E-value=4.1e-05 Score=66.60 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=42.7
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
+++.+++|+|. .+ .. + ..+.+.+.....+.++++||+++.|..+ .+......++... .+-
T Consensus 57 ~~i~viGDIHG------~~-~~------L-~~ll~~~g~~~~~~~vflGD~VDRG~~s--~evl~lL~~lk~~----~p~ 116 (330)
T 1fjm_A 57 APLKICGDIHG------QY-YD------L-LRLFEYGGFPPESNYLFLGDYVDRGKQS--LETICLLLAYKIK----YPE 116 (330)
T ss_dssp SSEEEECBCTT------CH-HH------H-HHHHHHHCSTTSSCEEECSCCSSSSSCH--HHHHHHHHHHHHH----STT
T ss_pred CceEEecCCCC------CH-HH------H-HHHHHHhCCCCcceEEeCCCcCCCCCCh--HHHHHHHHHhhhh----cCC
Confidence 57999999997 11 11 1 1122223334568899999999988632 2222222222221 133
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
.++.+.||||..
T Consensus 117 ~v~~lrGNHE~~ 128 (330)
T 1fjm_A 117 NFFLLRGNHECA 128 (330)
T ss_dssp TEEECCCTTSSH
T ss_pred ceEEecCCchHh
Confidence 689999999973
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.76 E-value=7.8e-05 Score=64.77 Aligned_cols=60 Identities=15% Similarity=0.091 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCCCcee-e-ccCCCeeEEeccceeccCCCCCceEEEEEec
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHNGCHK-Y-HAYGKVHEYTVPSFSWRNKNNPSFLMGYVVE 285 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~-~-~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~ 285 (293)
..+.+...+.|++.+.++++=||.=...-+ . +...-++++.+|.-|.+.+| .-.++.+++
T Consensus 234 ~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N--~~a~~~i~~ 295 (335)
T 3icf_A 234 AFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGN--LGGVIHVVP 295 (335)
T ss_dssp EECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCC--EEEEEEECT
T ss_pred eeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCC--ceEEEEEec
Confidence 345678899999999999999999654322 1 22113455555554444433 234455555
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=7.5e-05 Score=63.91 Aligned_cols=71 Identities=14% Similarity=0.256 Sum_probs=42.8
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
.+++++||+|. . +. . + .++.+.......+.++++||+++.|.. ..+.......++... +-
T Consensus 56 ~~i~viGDIHG-----~-~~-~------L-~~ll~~~g~~~~~~~vfLGD~VDrG~~--s~evl~lL~~lk~~~----p~ 115 (299)
T 3e7a_A 56 APLKICGDIHG-----Q-YY-D------L-LRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKY----PE 115 (299)
T ss_dssp SSEEEECBCTT-----C-HH-H------H-HHHHHHHCSTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHS----TT
T ss_pred CCEEEEecCCC-----C-HH-H------H-HHHHHHhCCCCCccEEeCCcccCCCCC--cHHHHHHHHHHHhhC----CC
Confidence 47999999998 1 11 1 1 112222333456789999999998873 223333333332222 33
Q ss_pred eEEEecCCCCC
Q psy2930 93 ELHVVPGNHDM 103 (293)
Q Consensus 93 ~~~~v~GNHD~ 103 (293)
.++.+.||||.
T Consensus 116 ~v~~lrGNHE~ 126 (299)
T 3e7a_A 116 NFFLLRGNHEC 126 (299)
T ss_dssp TEEECCCTTSS
T ss_pred cEEEEecCchh
Confidence 58999999996
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00013 Score=63.85 Aligned_cols=72 Identities=22% Similarity=0.370 Sum_probs=43.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
.++++++|+|.. +.+ +.+ +.+.......+.++++||+++.|.. ..+.......+.... +-
T Consensus 70 ~pi~ViGDIHG~------~~d-------L~~-ll~~~g~~~~~~~vfLGD~VDRG~~--s~Evl~lL~~lk~~~----p~ 129 (357)
T 3ll8_A 70 APVTVCGDIHGQ------FFD-------LMK-LFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKILY----PK 129 (357)
T ss_dssp SSEEEECCCTTC------HHH-------HHH-HHHHHCCTTTCCEEECSCCSSSSTT--HHHHHHHHHHHHHHC----TT
T ss_pred ccceeeccCCCC------HHH-------HHH-HHHhcCCCCCcEEEECCCccCCCcC--hHHHHHHHHHhhhhc----CC
Confidence 479999999981 111 111 2223333466889999999998863 222223333332222 23
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
.++.+.||||..
T Consensus 130 ~v~llrGNHE~~ 141 (357)
T 3ll8_A 130 TLFLLRGNHECR 141 (357)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEEeCchhhh
Confidence 589999999963
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0035 Score=52.14 Aligned_cols=101 Identities=15% Similarity=0.243 Sum_probs=53.9
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++.|+ +|.+. ........+.+++.. |++++-|.-...|...+ ...++.+.++ +.
T Consensus 1 m~ilfiGDi-~g~~G-----------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~----~~~~~~l~~~-----G~ 58 (252)
T 2z06_A 1 MRVLFIGDV-MAEPG-----------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD----RRSYRLLREA-----GV 58 (252)
T ss_dssp CEEEEECCB-CHHHH-----------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC----HHHHHHHHHH-----TC
T ss_pred CEEEEEEec-CCccc-----------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC----HHHHHHHHhC-----CC
Confidence 789999999 32221 112233344444455 88888777665565443 2323333332 44
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHH-------hCC----CCcceEEeCCEEEEEEec
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRA-------FNS----SMVKLLSIKGSYFVLINS 141 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~i~lds 141 (293)
-+ ++.|||++.... ....+.+. +.. ..+.+++.+|.++-+++-
T Consensus 59 D~-~T~GNHefD~~~-----l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l 112 (252)
T 2z06_A 59 DL-VSLGNHAWDHKE-----VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQV 112 (252)
T ss_dssp CE-EECCTTTTSCTT-----HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEE
T ss_pred CE-EEeccEeeECch-----HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEc
Confidence 44 578999987531 11111111 111 124678888888777643
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00021 Score=65.20 Aligned_cols=72 Identities=21% Similarity=0.327 Sum_probs=42.9
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
+++++++|+|. .+. . +.+ +.+.......+.+|++||+++.|.. ..+.......+... .+-
T Consensus 83 ~pI~VIGDIHG------q~~-d------L~~-LL~~~g~p~~d~yVFLGDyVDRGp~--S~Evl~lL~aLk~~----~P~ 142 (521)
T 1aui_A 83 APVTVCGDIHG------QFF-D------LMK-LFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKIL----YPK 142 (521)
T ss_dssp SSEEEECCCTT------CHH-H------HHH-HHHHHCCTTTCCEEECSCCSSSSSC--HHHHHHHHHHHHHH----STT
T ss_pred cceeeccCCCC------CHH-H------HHH-HHHhcCCCCcceEEEcCCcCCCCCC--HHHHHHHHHHHhhh----CCC
Confidence 57999999997 111 1 111 2222222356889999999998873 22333333333222 123
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
.++++.||||..
T Consensus 143 ~v~lLRGNHE~~ 154 (521)
T 1aui_A 143 TLFLLRGNHECR 154 (521)
T ss_dssp TEEECCCTTSSH
T ss_pred eEEEecCCccHH
Confidence 589999999963
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.001 Score=55.55 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=41.1
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++.|+ +|.+. ........+.+++.. |++++.|+-...|..... ..++.+..+ +.
T Consensus 1 m~ilf~GDv-~g~~G-----------~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~----~~~~~l~~~-----G~ 58 (255)
T 1t70_A 1 MRVLFIGDV-FGQPG-----------RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR----DAARGALEA-----GA 58 (255)
T ss_dssp CEEEEECCB-BHHHH-----------HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH----HHHHHHHHH-----TC
T ss_pred CEEEEEecc-CChHH-----------HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH----HHHHHHHhC-----CC
Confidence 789999999 33221 112233344444445 999998887776653332 223334332 33
Q ss_pred eEEEecCCCCCCCC
Q psy2930 93 ELHVVPGNHDMGFH 106 (293)
Q Consensus 93 ~~~~v~GNHD~~~~ 106 (293)
- .++.|||++...
T Consensus 59 D-a~TlGNHefD~~ 71 (255)
T 1t70_A 59 G-CLTLGNHAWHHK 71 (255)
T ss_dssp S-EEECCTTTTSST
T ss_pred C-EEEeccccccCc
Confidence 3 567799998753
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.012 Score=53.15 Aligned_cols=121 Identities=12% Similarity=0.195 Sum_probs=69.7
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCcc--------------CChhh
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQY--------------VGGED 74 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~--------------~~~~~ 74 (293)
.++++|++.|.++....... ++.+ ..+.+.++. .+||++|++|.++|..+. .....
T Consensus 145 ~~~l~ivvAsGPyT~sdnl~--yepL-------~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t 215 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNFS--LELL-------QEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKT 215 (460)
T ss_dssp SSCEEEEEEESCCSCSSCCC--CHHH-------HHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSS
T ss_pred CCCcEEEEEeCCccCCCccC--hHHH-------HHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccC
Confidence 46799999999987655322 1111 234555555 489999999999985431 01334
Q ss_pred HHHHHHHH-Hhhhc-CCCCceEEEecCCCCCCC-C--CCCCchhHHH--H-H-HHhCCCCcceEEeCCEEEEEE
Q psy2930 75 FDNYVRRF-YSLFS-TPDGTELHVVPGNHDMGF-H--YRLHPYLNDR--F-S-RAFNSSMVKLLSIKGSYFVLI 139 (293)
Q Consensus 75 ~~~~~~~~-~~~~~-~~~~~~~~~v~GNHD~~~-~--~~~~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~i~l 139 (293)
+.+.++.. ..+++ ...++.+++|||+||... . +...+...+. + + +..--+++..+.++++.|.+.
T Consensus 216 ~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~~~~~v~PQPpf~~k~l~l~k~nv~~~sNPc~~~in~v~igvs 289 (460)
T 3flo_A 216 LDELFLKLFTPILKTISPHIQTVLIPSTKDAISNHAAYPQASLIRKALQLPKRNFKCMANPSSFQINEIYFGCS 289 (460)
T ss_dssp HHHHHHHHTHHHHTTSCTTSEEEEECCTTBTTCSCCSBSBCCCCTTTTTCCTTTEEECCBSEEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEeCCcccccCCCCCcCCCCCChhhhcCCcccEEEeCCCEEEEECCEEEEEE
Confidence 55555544 22232 146788999999999852 1 1111110110 1 0 111112467888899887664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 293 | ||||
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 4e-07 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-05 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 4e-05 | |
| d1ii7a_ | 333 | d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus | 2e-04 |
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 48.2 bits (113), Expect = 4e-07
Identities = 37/300 (12%), Positives = 74/300 (24%), Gaps = 31/300 (10%)
Query: 16 IFIADTHL--LGPFRGHWFDKLRREWQMYKTFQTAVAL---HQPEHIFVLGDLLDEGQYV 70
IAD + + + R + AV + + + LGD++D
Sbjct: 7 GLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR 66
Query: 71 GGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS------ 124
+ ++H V GNH+ R + S +
Sbjct: 67 RDASDRAL-DTVMAELDA-CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDL 124
Query: 125 ------MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDR----- 173
+ FVL+++ L G I + +D
Sbjct: 125 IGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPV 184
Query: 174 ECPKSMKLGSYSQPIILQHFPLYRESDEECSGPD------SAPDIEKRKKFRQRWECISK 227
+ ++ Q S + +
Sbjct: 185 SVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHE 244
Query: 228 ESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENS 287
+L + + I GH H+G + G T+ ++ +F Y+ E+
Sbjct: 245 AVLSVLRSHQSVLCFIAGHDHDGGRCTDSSG-AQHITLEGVIETPPHSHAFATAYLYEDR 303
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 42.4 bits (98), Expect = 2e-05
Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 43/259 (16%)
Query: 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGG 72
I+DTH + + AL +P+ + V GD+++ G+
Sbjct: 2 LLAHISDTHFRSRGEKL-YGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEY 60
Query: 73 EDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIK 132
+ + L+++PGNHD F +L S
Sbjct: 61 QVARQILGSL--------NYPLYLIPGNHDD----------KALFLEYLQPLCPQLGSDA 102
Query: 133 GSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQH 192
+ ++ A + + L + I H
Sbjct: 103 NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG------DKPATIFMH 156
Query: 193 FPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCH 252
P + + ++ + + + GH H+
Sbjct: 157 HPPLPLGNAQM---------------DPIACENGHRLLALVERFPSLTRIFCGHNHSLTM 201
Query: 253 KYHAYGKVHEYTVPSFSWR 271
Y + T+P +
Sbjct: 202 --TQYRQALISTLPGTVHQ 218
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.7 bits (96), Expect = 4e-05
Identities = 32/261 (12%), Positives = 67/261 (25%), Gaps = 44/261 (16%)
Query: 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYV 70
+ + I+DTHL + + + ++ + + +P+ I GDL D+G+
Sbjct: 4 DYVLLHISDTHL-IGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPA 62
Query: 71 GGEDFDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLS 130
R F+ G EL V GNHD R + +
Sbjct: 63 AYRKL----RGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCM---- 114
Query: 131 IKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIIL 190
+ + + + + I+
Sbjct: 115 ----------------IDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILA 158
Query: 191 QHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNG 250
H P + E + + +L + R ++ GH H
Sbjct: 159 LHHPPIPSVLD----------------MAVTVELRDQAALGRVLRGTDVRAILAGHLHYS 202
Query: 251 CHKYHAYGKVHEYTVPSFSWR 271
+ + + + +
Sbjct: 203 TN--ATFVGIPVSVASATCYT 221
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 40.1 bits (92), Expect = 2e-04
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL---HQPEHIFVLGDLLDEGQY 69
+K +AD HL F K +RE + + F+ A+ + + I + GDL +
Sbjct: 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSR- 55
Query: 70 VGGEDFDNYVRRFYSLFSTPDGTELHVVPGNHD 102
+ + + GNHD
Sbjct: 56 PSPGTLKKAIALLQ--IPKEHSIPVFAIEGNHD 86
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 293 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.98 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.96 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.95 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.92 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.91 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.9 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.89 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.72 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.69 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.66 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.64 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.61 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.53 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.51 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 99.25 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 99.08 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.74 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.54 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.99 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.36 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 96.31 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 95.07 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 95.05 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 94.69 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 91.2 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 89.28 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.98 E-value=9.2e-31 Score=221.21 Aligned_cols=234 Identities=15% Similarity=0.189 Sum_probs=150.9
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh-cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcC
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL-HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFST 88 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (293)
.+.|||+||||+|++....+.+ ........+.+++.++.+. .+||+||++|||++.|.. +++..+.+.+.+...
T Consensus 2 ~~~~~i~~iSD~Hl~~~~~~~~-~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~---~~~~~~~~~l~~~~~- 76 (256)
T d2hy1a1 2 RPDYVLLHISDTHLIGGDRRLY-GAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP---AAYRKLRGLVEPFAA- 76 (256)
T ss_dssp CCSEEEEEECCCCBC-----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCH---HHHHHHHHHHHHHHH-
T ss_pred CCCEEEEEEeeCccCCCCcccc-cCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCh---hHHHHHHHHhhhhhh-
Confidence 4579999999999976543221 1111122343444333332 489999999999998753 333333333332221
Q ss_pred CCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC------CcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHH
Q psy2930 89 PDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS------MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLI 162 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l 162 (293)
..++|+++++||||.. ..+.+.+... .++.+..++++|+++||..... ..+....++++||
T Consensus 77 ~~~~p~~~v~GNHD~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~---~~g~~~~~~~~wl 143 (256)
T d2hy1a1 77 QLGAELVWVMGNHDDR----------AELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGH---HHGEIRASQLGWL 143 (256)
T ss_dssp HHTCEEEECCCTTSCH----------HHHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTC---SSBCCCHHHHHHH
T ss_pred hcCCCEEEEcccccch----------hhhhhhhccccccccccceEEEecccceeeeeeeecCC---cCCcccHHHHHHH
Confidence 2368999999999952 3344444332 2467889999999999866332 2234567899999
Q ss_pred HHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEE
Q psy2930 163 SAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLV 242 (293)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lv 242 (293)
++.|+.. +..++||++|||++....... .. ....+.+.+.+++++++++++
T Consensus 144 ~~~L~~~-------------~~~~~iv~~Hhpp~~~~~~~~----------~~------~~~~~~~~~~~i~~~~~v~~~ 194 (256)
T d2hy1a1 144 AEELATP-------------APDGTILALHHPPIPSVLDMA----------VT------VELRDQAALGRVLRGTDVRAI 194 (256)
T ss_dssp HHHHTSC-------------CTTCEEEECSSCSSCCSSHHH----------HT------TSBCCHHHHHHHHTTSSEEEE
T ss_pred HHHHHhh-------------hccCceeeeecCCcccccccc----------cc------cccccHHHHHHHHhccCceEE
Confidence 9999864 567889999999976432100 00 112345678899999999999
Q ss_pred EecCCCCCceeeccCCCeeEEeccceeccC------C------CCCceEEEEEecCCceeee
Q psy2930 243 IDGHTHNGCHKYHAYGKVHEYTVPSFSWRN------K------NNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 243 l~GH~H~~~~~~~~~~~~~~~~~~s~~~~~------~------~~p~f~~~~~~~~~~~~~~ 292 (293)
||||+|...... .++++++++||.+++. + ..+||.++++++++...+.
T Consensus 195 ~~GH~H~~~~~~--~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~~~~~~ 254 (256)
T d2hy1a1 195 LAGHLHYSTNAT--FVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSV 254 (256)
T ss_dssp EECSSSSCEEEE--ETTEEEEECCCCC-------------------CEEEEEECSSCEEEEE
T ss_pred EccccchhhceE--ECCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEECCCEEEEe
Confidence 999999887643 3589999999987532 1 3579999999999987653
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.96 E-value=2.1e-28 Score=208.41 Aligned_cols=228 Identities=17% Similarity=0.183 Sum_probs=148.1
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHh--cCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVAL--HQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
|+|++|||+|++......+ ........+.++ .+.++. .+||+||++|||++.+. .+++ +.+.+.+. ..
T Consensus 1 M~i~hiSD~Hl~~~~~~~~-~~~~~~~~l~~~-~~~i~~~~~~~D~vv~~GDl~~~~~---~~~y----~~~~~~l~-~l 70 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLY-GFIDVNAANADV-VSQLNALRERPDAVVVSGDIVNCGR---PEEY----QVARQILG-SL 70 (271)
T ss_dssp CEEEEECCCCBCSTTCCBT-TTBCHHHHHHHH-HHHHHTCSSCCSEEEEESCCBSSCC---HHHH----HHHHHHHT-TC
T ss_pred CEEEEEecCcCCCCccccc-cCcCHHHHHHHH-HHHHHhcCCCCCEEEECcccCcCCc---chhH----HHHHHHHh-cc
Confidence 8999999999976543211 111111123333 333443 48999999999999764 3333 34444443 45
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHHHhCC---C---CcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHH
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS---S---MVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISA 164 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~ 164 (293)
++|+++++||||... ...+.+...+.. . ..+.+..++++++++||...... .+.+..+|++||++
T Consensus 71 ~~p~~~i~GNHD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~---~~~l~~~ql~wL~~ 141 (271)
T d3d03a1 71 NYPLYLIPGNHDDKA------LFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTS---KGWLTDETISWLEA 141 (271)
T ss_dssp SSCEEEECCTTSCHH------HHHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCS---SBCCCHHHHHHHHH
T ss_pred CCCEEEEecCccchH------HHHHHhhhhhhccccccCcceEEEecCCeEEEecccccCCCC---cceecHHHHHHHHH
Confidence 789999999999731 111222211111 1 13556667899999998764322 23456799999999
Q ss_pred HhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEE
Q psy2930 165 KLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVI 243 (293)
Q Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl 243 (293)
+|++. ++.++||++|||++..... ..+. +...+.+.+.++|+++ +++++|
T Consensus 142 ~L~~~-------------~~~~~iv~~Hh~p~~~~~~---~~d~-------------~~~~~~~~l~~~l~~~~~v~~vl 192 (271)
T d3d03a1 142 QLFEG-------------GDKPATIFMHHPPLPLGNA---QMDP-------------IACENGHRLLALVERFPSLTRIF 192 (271)
T ss_dssp HHHHH-------------TTSCEEEEESSCSSCCSCT---TTGG-------------GSBTTTHHHHHHHHHCTTEEEEE
T ss_pred HHhhh-------------ccceeEEEeccCccccCcc---cccc-------------ccccchHHHHHHHHhcCCeEEEE
Confidence 99875 5678999999999754431 1111 1233445678899987 699999
Q ss_pred ecCCCCCceeeccCCCeeEEeccceeccCC------------CCCceEEEEEecCCcee
Q psy2930 244 DGHTHNGCHKYHAYGKVHEYTVPSFSWRNK------------NNPSFLMGYVVENSSGV 290 (293)
Q Consensus 244 ~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~------------~~p~f~~~~~~~~~~~~ 290 (293)
|||+|+..... .++++.+++||+|.+.. ..|||.+..+.+.+...
T Consensus 193 ~GH~H~~~~~~--~~g~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 249 (271)
T d3d03a1 193 CGHNHSLTMTQ--YRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVS 249 (271)
T ss_dssp ECSSSSCEEEE--ETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEE
T ss_pred eCCcchhhceE--ECCEEEEEcCCceeecccCCCCCCcccccCCCEEEEEEEeCCCEEE
Confidence 99999987754 35899999999886531 24588887777665433
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.95 E-value=7.5e-28 Score=206.99 Aligned_cols=249 Identities=16% Similarity=0.150 Sum_probs=158.9
Q ss_pred CceEEEEEecCCcCCCCCCc----hhH-HHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhh
Q psy2930 11 NNIKAIFIADTHLLGPFRGH----WFD-KLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSL 85 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~ 85 (293)
+-|||+++||+|++...... ... .........+.+.+.+++.+||+||++||+++.+.... ....+.++.+.+.
T Consensus 2 p~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~-~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 2 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR-DASDRALDTVMAE 80 (320)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT-TCHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcch-hHHHHHHHHHHHH
Confidence 34999999999998543210 000 00111123334445667889999999999998654222 2233345555555
Q ss_pred hcCCCCceEEEecCCCCCCCCC---------C-CCchhHHHHHHHhCCC--CcceEEeCCEEEEEEeceeccCCCC----
Q psy2930 86 FSTPDGTELHVVPGNHDMGFHY---------R-LHPYLNDRFSRAFNSS--MVKLLSIKGSYFVLINSMALEGDGC---- 149 (293)
Q Consensus 86 ~~~~~~~~~~~v~GNHD~~~~~---------~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~lds~~~~~~~~---- 149 (293)
+. ..++|++.++||||..... . ........+...++.. .......++++++.+++........
T Consensus 81 ~~-~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (320)
T d2nxfa1 81 LD-ACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEES 159 (320)
T ss_dssp HH-TTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTS
T ss_pred HH-HcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccc
Confidence 54 4689999999999974210 0 0000000001111111 2356678999999998764321111
Q ss_pred -----------------------------------CCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccC
Q psy2930 150 -----------------------------------FLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFP 194 (293)
Q Consensus 150 -----------------------------------~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P 194 (293)
....+..+|++||++.|+.+.. +..++|+++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-----------~~~~viv~~H~p 228 (320)
T d2nxfa1 160 EKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-----------KQERVLIFSHLP 228 (320)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-----------HTCEEEEEESSC
T ss_pred cccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-----------cCCceEEEECCC
Confidence 1123467899999999987654 567889999999
Q ss_pred CCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhc-CccEEEecCCCCCceeeccCCCeeEEeccceeccCC
Q psy2930 195 LYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYL-NPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK 273 (293)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~-~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~ 273 (293)
+........ ....+.+.+.++|.++ +++++|+||+|........+ +++++++|++.....
T Consensus 229 ~~~~~~~~~------------------~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~~-g~~~i~~~~~~~~~~ 289 (320)
T d2nxfa1 229 VHPCAADPI------------------CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS-GAQHITLEGVIETPP 289 (320)
T ss_dssp CCTTSSCGG------------------GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTT-SCEEEECCCGGGCCT
T ss_pred CccCCCCCc------------------cchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeeccC-CCEEEECCeeecCCC
Confidence 976543210 0123345678888888 59999999999987655444 899999999776666
Q ss_pred CCCceEEEEEecCCceee
Q psy2930 274 NNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 274 ~~p~f~~~~~~~~~~~~~ 291 (293)
..++|.+++|.++++.++
T Consensus 290 ~~~~~~~~~v~~d~~~~~ 307 (320)
T d2nxfa1 290 HSHAFATAYLYEDRMVMK 307 (320)
T ss_dssp TSCEEEEEEECSSEEEEE
T ss_pred CCCCEEEEEEECCEEEEE
Confidence 678999999999987764
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.92 E-value=8e-24 Score=183.06 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=127.1
Q ss_pred CCCCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHH-HHHhcCCCEEEEcCccCCC-C-ccCChhhHHHHHHHHHh
Q psy2930 8 ESINNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQT-AVALHQPEHIFVLGDLLDE-G-QYVGGEDFDNYVRRFYS 84 (293)
Q Consensus 8 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pd~vi~~GDl~~~-~-~~~~~~~~~~~~~~~~~ 84 (293)
.++.++||++++|++.... ..+++.. .+...+||+||++||++.. + ......+|..+.+.+..
T Consensus 3 g~~~p~~F~v~GD~g~~~~--------------~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~ 68 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFD--------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER 68 (312)
T ss_dssp CSSCCEEEEEECSCCSBHH--------------HHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCCc--------------hHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHH
Confidence 4577899999999865211 1112222 2345699999999999852 2 12233456665565655
Q ss_pred hhcCCCCceEEEecCCCCCCCCCC-CCchhHHHHHHHhCCC---------CcceEEeCCEEEEEEeceeccCCCCCCCch
Q psy2930 85 LFSTPDGTELHVVPGNHDMGFHYR-LHPYLNDRFSRAFNSS---------MVKLLSIKGSYFVLINSMALEGDGCFLCKP 154 (293)
Q Consensus 85 ~~~~~~~~~~~~v~GNHD~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 154 (293)
+. ..+|+++++||||+..... ........|...|..+ .+|.+..++++||+||+..... .
T Consensus 69 ~~---~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~-------~ 138 (312)
T d2qfra2 69 SV---AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYG-------R 138 (312)
T ss_dssp HH---TTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCS-------T
T ss_pred Hh---hcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeecccccc-------c
Confidence 54 4689999999999854321 1112234455555432 2688999999999998754221 2
Q ss_pred hHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHH
Q psy2930 155 AQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLL 234 (293)
Q Consensus 155 ~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll 234 (293)
..+|++||++.|+.+... ...++|+++|+|++......+. + ....+..+.+++
T Consensus 139 ~~~Q~~WL~~~L~~~~~~----------~~~w~iv~~H~P~y~~~~~~~~--~---------------~~~~r~~l~~l~ 191 (312)
T d2qfra2 139 GTPQYTWLKKELRKVKRS----------ETPWLIVLMHSPLYNSYNHHFM--E---------------GEAMRTKFEAWF 191 (312)
T ss_dssp TSHHHHHHHHHHHTCCTT----------TCCEEEEECSSCSSCCBSTTTT--T---------------THHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhc----------CCCEEEEEccccccccCCCCcc--c---------------chhHHHHHHHHH
Confidence 347999999999875321 2234789999999865431110 0 001134678899
Q ss_pred hhcCccEEEecCCCCCcee
Q psy2930 235 DYLNPRLVIDGHTHNGCHK 253 (293)
Q Consensus 235 ~~~~~~lvl~GH~H~~~~~ 253 (293)
.+++++++|+||.|.+.+.
T Consensus 192 ~~~~Vdlv~~GH~H~YeRt 210 (312)
T d2qfra2 192 VKYKVDVVFAGHVHAYERS 210 (312)
T ss_dssp HHTTCSEEEECSSSSEEEE
T ss_pred HHcCcEEEEEccCcceEEE
Confidence 9999999999999998763
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=3e-24 Score=184.28 Aligned_cols=239 Identities=16% Similarity=0.122 Sum_probs=148.6
Q ss_pred CCceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCC-Ccc-CChhhHHHHHHHHHhhhc
Q psy2930 10 INNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDE-GQY-VGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 10 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~-~~~-~~~~~~~~~~~~~~~~~~ 87 (293)
.+.+||++++|+|.+.......... ....+.+.+.+++.+||+||++||++.. |.. ..+.+|...++.+.....
T Consensus 2 ~~~~~F~vigD~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~ 77 (302)
T d1utea_ 2 TPILRFVAVGDWGGVPNAPFHTARE----MANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 77 (302)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHH----HHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCCeEEEEEecCCCCCCcccccHHH----HHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhh
Confidence 4679999999998865543221111 1123456777778899999999999853 322 223344443333322211
Q ss_pred CCCCceEEEecCCCCCCCCCCCCchhHHHHHH---H--hCCCCcceEEe------CCEEEEEEeceeccCCC--------
Q psy2930 88 TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSR---A--FNSSMVKLLSI------KGSYFVLINSMALEGDG-------- 148 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~------~~~~~i~lds~~~~~~~-------- 148 (293)
..++|+++++||||..... .....+.. . ++.. ++.+.. +.+.|+++|+.......
T Consensus 78 -~~~~P~~~~~GNHD~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 78 -LRNVPWHVLAGNHDHLGNV----SAQIAYSKISKRWNFPSP-YYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp -GTTCCEEECCCHHHHHSCH----HHHHHGGGTSTTEECCSS-SEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred -hcCCceEEeeccccccccc----ccccchhhccccccCCCc-ccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 4688999999999974321 00011110 0 1111 333332 46899999886543221
Q ss_pred --CCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccC
Q psy2930 149 --CFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECIS 226 (293)
Q Consensus 149 --~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 226 (293)
........+|++||++.|+.+ +..++|+++|||++...... . . .-.
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~~-------------~~~~~iv~~h~~~~~~~~~~--~-~----------------~~~ 199 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAAA-------------KEDYVLVAGHYPVWSIAEHG--P-T----------------HCL 199 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHHC-------------CCSEEEEECSSCSSCCSSSC--C-C----------------HHH
T ss_pred cccccchhHHHHHHHHHHHHHhh-------------ccCceEEEEeccccccCCCC--C-c----------------hhh
Confidence 112235678999999999976 55778999999997654211 0 0 001
Q ss_pred HHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC---------------------CCCCceEEEEEec
Q psy2930 227 KESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN---------------------KNNPSFLMGYVVE 285 (293)
Q Consensus 227 ~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~---------------------~~~p~f~~~~~~~ 285 (293)
...+.+++++++++++||||.|.+...... +++..+++++.+... ....||.+++|++
T Consensus 200 ~~~~~~ll~~~~v~~~~~GH~H~~~r~~~~-~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~~ 278 (302)
T d1utea_ 200 VKQLLPLLTTHKVTAYLCGHDHNLQYLQDE-NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITP 278 (302)
T ss_dssp HHHTHHHHHHTTCSEEEECSSSSEEEEECT-TCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECS
T ss_pred hhhhhHHHHhcCceEEEeCCCcceEEEecC-CccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEEEC
Confidence 236788999999999999999998765433 366777765543210 1245899999999
Q ss_pred CCceee
Q psy2930 286 NSSGVN 291 (293)
Q Consensus 286 ~~~~~~ 291 (293)
+.++++
T Consensus 279 ~~l~~~ 284 (302)
T d1utea_ 279 KEMSVT 284 (302)
T ss_dssp SCEEEE
T ss_pred CEEEEE
Confidence 988775
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=3.1e-22 Score=164.46 Aligned_cols=212 Identities=11% Similarity=0.043 Sum_probs=137.6
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
++.+|+.+||+|. + ....+++.+.+.+.++|+||++||+++.+. ...++....+.+. +.
T Consensus 4 ~~~~i~~~sd~hg-----~---------~eale~~~~~~~~~~~D~vv~~GDl~~~~~--~~~~~~~~~~~L~-----~~ 62 (228)
T d1uf3a_ 4 TVRYILATSNPMG-----D---------LEALEKFVKLAPDTGADAIALIGNLMPKAA--KSRDYAAFFRILS-----EA 62 (228)
T ss_dssp CCCEEEEEECCTT-----C---------HHHHHHHHTHHHHHTCSEEEEESCSSCTTC--CHHHHHHHHHHHG-----GG
T ss_pred cccEEEEEeCCCC-----C---------HHHHHHHHHHHhhcCCCEEEECCCCCCCCc--cchHHHHhhhhhc-----cc
Confidence 4578999999999 1 123455666667789999999999999765 2334444443333 35
Q ss_pred CceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEEeceeccCCCC---CCCchhHHHHHH
Q psy2930 91 GTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLINSMALEGDGC---FLCKPAQDRISL 161 (293)
Q Consensus 91 ~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~lds~~~~~~~~---~~~~~~~~~l~~ 161 (293)
++|+++|+||||.... ......+...... ........+++.++.+++........ ........++.+
T Consensus 63 ~~pv~~i~GNHD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (228)
T d1uf3a_ 63 HLPTAYVPGPQDAPIW----EYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEY 138 (228)
T ss_dssp CSCEEEECCTTSCSHH----HHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHH
T ss_pred cceEEEEecCCCchhh----hhhhhhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHH
Confidence 7899999999997421 1111112211111 11345667888888887665443221 223445677888
Q ss_pred HHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccE
Q psy2930 162 ISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRL 241 (293)
Q Consensus 162 l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~l 241 (293)
+.+.++.. ...+.|+++|+|+...... ..+...+.++++..++++
T Consensus 139 l~~~l~~~-------------~~~~~il~~H~p~~~~~~~----------------------~~~~~~~~~~~~~~~~~l 183 (228)
T d1uf3a_ 139 RLKALWEL-------------KDYPKIFLFHTMPYHKGLN----------------------EQGSHEVAHLIKTHNPLL 183 (228)
T ss_dssp HHGGGGGS-------------CSCCEEEEESSCBCBTTTB----------------------TTSBHHHHHHHHHHCCSE
T ss_pred HHHHHhhc-------------cCCceEEEEeeeccCcccc----------------------ccccHHHHHHHHhcCCcE
Confidence 87776653 5667899999998654321 112235678889999999
Q ss_pred EEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 242 VIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 242 vl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
++|||+|..... .++..+++.+++. ...|.++++.++.+.+
T Consensus 184 vl~GH~H~~~~~---~g~~~~v~pG~~~-----~g~y~~i~~~~~~ie~ 224 (228)
T d1uf3a_ 184 VLVAGKGQKHEM---LGASWVVVPGDLS-----EGEYSLLDLRARKLET 224 (228)
T ss_dssp EEECCSSCEEEE---ETTEEEEECCBGG-----GTEEEEEETTTTEEEE
T ss_pred EEEcccccchhc---cCCEEEEECCccc-----cceEEEEEccCCEEEE
Confidence 999999987543 2456666666553 2468899888877654
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.89 E-value=1.5e-22 Score=169.22 Aligned_cols=225 Identities=13% Similarity=0.116 Sum_probs=132.0
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhh-----------------
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGED----------------- 74 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~----------------- 74 (293)
+.||+++||+|... . ..+.+.+.+...+||+||++|||++.+......+
T Consensus 2 ~~ri~~isD~h~~~----~----------~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (257)
T d2yvta1 2 PRKVLAIKNFKERF----D----------LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHEN 67 (257)
T ss_dssp CCEEEEEECCTTCG----G----------GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred CcEEEEEeCCCCCH----H----------HHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccc
Confidence 47999999999611 1 1234566677789999999999999654221100
Q ss_pred ---HHHHHHHHHhhhcCCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCC------CCcceEEeCCEEEEEEeceecc
Q psy2930 75 ---FDNYVRRFYSLFSTPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNS------SMVKLLSIKGSYFVLINSMALE 145 (293)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~lds~~~~ 145 (293)
-...++.+.+.+. ..++|+++++||||... .......+...... ........+++.++++++....
T Consensus 68 ~n~d~~~~~~~~~~L~-~~~~pv~~i~GNHD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T d2yvta1 68 EHYIIETLDKFFREIG-ELGVKTFVVPGKNDAPL----KIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTE 142 (257)
T ss_dssp HHHHHHHHHHHHHHHH-TTCSEEEEECCTTSCCH----HHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEES
T ss_pred cccchhhHHHHHHHHH-hcCCcEEEEeCCCcchh----hHHHHHhccccccccccccccceeEEecCCeEEEEeccccCC
Confidence 0011222223222 46899999999999742 11111222211111 1123444577888888766544
Q ss_pred CCCCCCC--chhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccccc
Q psy2930 146 GDGCFLC--KPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWE 223 (293)
Q Consensus 146 ~~~~~~~--~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (293)
....... ........++...+... +..+.|+++|+|+......... ....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Il~~H~pp~~~~~~~~~---------------~~~~ 194 (257)
T d2yvta1 143 HEFEEDFVLKYPRWYVEYILKFVNEL-------------KPRRLVTIFYTPPIGEFVDRTP---------------EDPK 194 (257)
T ss_dssp SCCBSSSSCEEEHHHHHHHGGGGGGS-------------CCCEEEEEESSCCSCSSTTCBT---------------TBSC
T ss_pred ccccchhhhhhhhhHHHHHHHHhhhc-------------ccccEEEEEccccccccccccc---------------cchh
Confidence 3322211 11222222333333221 5677899999999654321100 0112
Q ss_pred ccCHHHHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccCCCCCceEEEEEecCCceee
Q psy2930 224 CISKESTDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 224 ~l~~~~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~~ 291 (293)
......+.+++++++++++++||+|..... .++..+++.+|++ ..+|.++++..+.+.+.
T Consensus 195 ~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~---~g~~~~~~pGs~~-----~g~y~~id~~~~~i~~~ 254 (257)
T d2yvta1 195 HHGSAVVNTIIKSLNPEVAIVGHVGKGHEL---VGNTIVVNPGEFE-----EGRYAFLDLTQHKIKLE 254 (257)
T ss_dssp CCSCHHHHHHHHHHCCSEEEECSSCCEEEE---ETTEEEEECCBGG-----GTEEEEEETTTTEEEEE
T ss_pred hhhhHHHHHhhhhcCCcEEEEEeecCCeEe---cCCeEEEECCccc-----cCEEEEEEEeCCEEEEE
Confidence 344567889999999999999999987643 2466777777654 24799999988777664
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.72 E-value=1.7e-17 Score=143.27 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=59.3
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+|+||+|+|...... ..+...-....+.+.+.+.+.++|+||++||+++.+.. +.+......+.+..+. ..++
T Consensus 1 Mkilh~SDlHlG~~~~~~-~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~-~~~~~~~~~~~~~~l~--~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK-PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP-SPGTLKKAIALLQIPK--EHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC-CHHHHHHHHHHHHHHH--TTTC
T ss_pred CEEEEEecCcCCCCCcCc-hhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC-CHHHHHHHHHHHhhHH--hcCC
Confidence 899999999998653221 11111112233444555566799999999999996543 3444555555555554 5789
Q ss_pred eEEEecCCCCCCC
Q psy2930 93 ELHVVPGNHDMGF 105 (293)
Q Consensus 93 ~~~~v~GNHD~~~ 105 (293)
|+++++||||...
T Consensus 77 ~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 77 PVFAIEGNHDRTQ 89 (333)
T ss_dssp CEEEECCTTTCCS
T ss_pred cEEEeCCCCcccc
Confidence 9999999999854
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.69 E-value=4.7e-16 Score=121.44 Aligned_cols=162 Identities=14% Similarity=0.072 Sum_probs=103.4
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++||+|. + . ...+++.+.+++.++|.|+++||++..+. .+.+.+ ...
T Consensus 1 MkI~iiSDiHg-----n--~-------~al~~vl~~~~~~~~D~ii~~GD~~~~~~----------~~~l~~-----~~~ 51 (165)
T d1s3la_ 1 MKIGIMSDTHD-----H--L-------PNIRKAIEIFNDENVETVIHCGDFVSLFV----------IKEFEN-----LNA 51 (165)
T ss_dssp CEEEEECCCTT-----C--H-------HHHHHHHHHHHHSCCSEEEECSCCCSTHH----------HHHGGG-----CSS
T ss_pred CEEEEEEeCCC-----C--H-------HHHHHHHHHHHhcCCCEEEECCCccCHHH----------HHHHhh-----cCc
Confidence 89999999996 1 1 12233455667789999999999996321 233333 456
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHHHHhCCCCcceEEeCCEEEEEEeceeccCCCCCCCchhHHHHHHHHHHhhhcccC
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSSMVKLLSIKGSYFVLINSMALEGDGCFLCKPAQDRISLISAKLKCCRKD 172 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~ 172 (293)
|++.+.||||.... ............ .. ...... +.
T Consensus 52 ~~~~v~GN~D~~~~------~~~~~~~~~~~~--~~--~~~~~~-----------------------------~~----- 87 (165)
T d1s3la_ 52 NIIATYGNNDGERC------KLKEWLKDINEE--NI--IDDFIS-----------------------------VE----- 87 (165)
T ss_dssp EEEEECCTTCCCHH------HHHHHHHHHCTT--CE--EESEEE-----------------------------EE-----
T ss_pred cEEEEcccccccch------hhhHhhhhhccc--cc--CChhhc-----------------------------eE-----
Confidence 89999999997421 011111111111 00 000000 00
Q ss_pred CCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhcccccccccccCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 173 RECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQRWECISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 173 ~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
.+...|+++|.++. ....++++..+++++++||+|.+..
T Consensus 88 ----------~~~~~i~l~Hg~~~-------------------------------~~~~~~~~~~~~d~v~~GHtH~~~~ 126 (165)
T d1s3la_ 88 ----------IDDLKFFITHGHHQ-------------------------------SVLEMAIKSGLYDVVIYGHTHERVF 126 (165)
T ss_dssp ----------ETTEEEEEEESCCH-------------------------------HHHHHHHHHSCCSEEEEECSSCCEE
T ss_pred ----------ECCcEEEEEECCcc-------------------------------cHHHHHhhcCCCCEEEECCcCcceE
Confidence 23456788887641 1345566777899999999999876
Q ss_pred eeccCCCeeEEeccceeccCCCCCceEEEEEecCCcee
Q psy2930 253 KYHAYGKVHEYTVPSFSWRNKNNPSFLMGYVVENSSGV 290 (293)
Q Consensus 253 ~~~~~~~~~~~~~~s~~~~~~~~p~f~~~~~~~~~~~~ 290 (293)
.. .++...++.+|++....+.|+|.+++++.+.++.
T Consensus 127 ~~--~~~~~~iNPGSvg~p~~~~~s~~ild~~~~~~~~ 162 (165)
T d1s3la_ 127 EE--VDDVLVINPGECCGYLTGIPTIGILDTEKKEYRE 162 (165)
T ss_dssp EE--ETTEEEEECCCSSCTTTSCCEEEEEETTTTEEEE
T ss_pred EE--ECCEEEEECCCCCCCCCCCCEEEEEEccCCeEEE
Confidence 43 3589999999998655567899999998876654
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.66 E-value=3.2e-16 Score=124.13 Aligned_cols=62 Identities=18% Similarity=0.089 Sum_probs=48.0
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-C----CCCceEEEEEecCCceeee
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-K----NNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-~----~~p~f~~~~~~~~~~~~~~ 292 (293)
.+.+..+..+++++++||+|.+.... .++...++.+|++... + +.|+|.+++++++++++.+
T Consensus 98 ~l~~~~~~~~~divi~GHTH~p~~~~--~~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~~~v~~~~ 164 (182)
T d1z2wa1 98 SLALLQRQFDVDILISGHTHKFEAFE--HENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYV 164 (182)
T ss_dssp HHHHHHHHHSSSEEECCSSCCCEEEE--ETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEE
T ss_pred HHHHHHhccCCCEEEECCcCcceEEE--ECCEEEEeCCCCCCCCCCCCCCCCCEEEEEEEeCCEEEEEE
Confidence 44566667789999999999997653 3589999999987533 2 4679999999999877653
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.64 E-value=2.2e-15 Score=120.54 Aligned_cols=61 Identities=16% Similarity=0.058 Sum_probs=48.5
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC----C-CCCceEEEEEecCCceee
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN----K-NNPSFLMGYVVENSSGVN 291 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~----~-~~p~f~~~~~~~~~~~~~ 291 (293)
.+.+++...+++++++||+|.+.... .++...++.+|++... + +.|+|.+++++++++++.
T Consensus 110 ~l~~~~~~~~~dvvi~GHTH~~~~~~--~~g~~~iNPGSvg~pr~~~~~~~~~syaild~~~~~v~v~ 175 (193)
T d2a22a1 110 SLEQWQRRLDCDILVTGHTHKLRVFE--KNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLY 175 (193)
T ss_dssp HHHHHHHHHTCSEEEECSSCCCEEEE--ETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEE
T ss_pred HHHHHHhhcCCCEEEEcCccCceEEE--ECCEEEEECCCCCcCcCCCCCCCCCEEEEEEEECCEEEEE
Confidence 45667777789999999999997653 3488999999987432 2 467999999999987764
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.61 E-value=3.7e-15 Score=123.43 Aligned_cols=58 Identities=7% Similarity=-0.003 Sum_probs=41.0
Q ss_pred HHHHhhc-CccEEEecCCCCCceeeccCCCeeEEeccceeccCC--CCCceEEEEEecCCcee
Q psy2930 231 DMLLDYL-NPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRNK--NNPSFLMGYVVENSSGV 290 (293)
Q Consensus 231 ~~ll~~~-~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~~--~~p~f~~~~~~~~~~~~ 290 (293)
...+... +.+++++||+|...... .++...++++|+++... +.++|.+++++...+++
T Consensus 158 ~~~~~~~~~~d~vv~GHtH~~~~~~--~~~~~~in~Gsvg~~~~g~~~~~y~i~d~~~~~~~~ 218 (251)
T d1nnwa_ 158 EAIMRPVKDYEMLIVASPMYPVDAM--TRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPKF 218 (251)
T ss_dssp HHHHGGGTTSSEEEESTTCSEEEEE--ETTEEEEEECCSSSCSSSSCCEEEEEEETTTCCEEE
T ss_pred hhhcccccCceEEEEeccceEEEEE--eeeeeccccccccccCCCCCCCeEEEEEcCCCeEEE
Confidence 3344433 68999999999987654 24788999999987654 35689998876554443
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1.8e-13 Score=108.24 Aligned_cols=74 Identities=22% Similarity=0.262 Sum_probs=49.2
Q ss_pred ceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCCh---hhHHHHHHHHHhhhcC
Q psy2930 12 NIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGG---EDFDNYVRRFYSLFST 88 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~---~~~~~~~~~~~~~~~~ 88 (293)
.|||+++||+|. . +. ..+++.+.+++.++|.||++||+++.+..... ......++.+.
T Consensus 1 mMki~iiSDiHg-----~--~~-------al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~----- 61 (184)
T d1su1a_ 1 MMKLMFASDIHG-----S--LP-------ATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLN----- 61 (184)
T ss_dssp CCEEEEECCCTT-----B--HH-------HHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHH-----
T ss_pred CcEEEEEeecCC-----C--HH-------HHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHH-----
Confidence 489999999995 1 11 22335555667799999999999997653221 11223333333
Q ss_pred CCCceEEEecCCCCCC
Q psy2930 89 PDGTELHVVPGNHDMG 104 (293)
Q Consensus 89 ~~~~~~~~v~GNHD~~ 104 (293)
..+.+++.+.||||..
T Consensus 62 ~~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 62 EVAHKVIAVRGNCDSE 77 (184)
T ss_dssp TTGGGEEECCCTTCCH
T ss_pred hcCCcEEEecCCCCch
Confidence 2456899999999973
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.51 E-value=1.5e-13 Score=107.71 Aligned_cols=62 Identities=15% Similarity=0.061 Sum_probs=48.9
Q ss_pred HHHHHHhhcCccEEEecCCCCCceeeccCCCeeEEeccceeccC-C-CCCceEEEEEecCCceeee
Q psy2930 229 STDMLLDYLNPRLVIDGHTHNGCHKYHAYGKVHEYTVPSFSWRN-K-NNPSFLMGYVVENSSGVNL 292 (293)
Q Consensus 229 ~~~~ll~~~~~~lvl~GH~H~~~~~~~~~~~~~~~~~~s~~~~~-~-~~p~f~~~~~~~~~~~~~~ 292 (293)
.+.+.....+++++++||+|.+.... .+++..++.+|++... + +.++|.++++++++++|+.
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~--~~~~~~iNPGSvg~pr~~~~~~syail~~~~~~~~v~~ 156 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL--EGKILFLNPGSISQPRGTIRECLYARVEIDDSYFKVDF 156 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--ETTEEEEEECCSSSCCTTCCSCCEEEEEECSSEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE--ECCEEEEECCCCCCCCCCCCCCEEEEEEEeCCEEEEEE
Confidence 34556666789999999999998653 3589999999998643 3 4679999999998877653
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.25 E-value=1.6e-11 Score=97.06 Aligned_cols=79 Identities=20% Similarity=0.189 Sum_probs=44.6
Q ss_pred EEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhc--CCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 15 AIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALH--QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 15 i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
+.++||+|+|....-.. ..+.+-..+.+.+.+..++. +.|.|+++||++..... .+++. ++.+.+ +.
T Consensus 4 i~fiSD~Hfgh~~i~~~-r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~--~~~~~----~~l~~L----~g 72 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINL-NPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND--KNEYL----RIWKAL----PG 72 (188)
T ss_dssp EEEEBCCCBTCTTHHHH-STTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC--TTSHH----HHHHHS----SS
T ss_pred EEEEeCcCCCCcchhhc-CCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCC--HHHHH----HHHHHC----CC
Confidence 56799999986542110 00000112334444445442 67999999999874331 12222 233333 23
Q ss_pred eEEEecCCCCCC
Q psy2930 93 ELHVVPGNHDMG 104 (293)
Q Consensus 93 ~~~~v~GNHD~~ 104 (293)
+++.|.||||..
T Consensus 73 ~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 73 RKILVMGNHDKD 84 (188)
T ss_dssp EEEEECCTTCCC
T ss_pred ceEEEecCCCch
Confidence 678999999974
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=2.9e-09 Score=91.59 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=95.5
Q ss_pred ceEEEEEecCCcCCCCC--C-chhHHHHhHHHHHHHHHHHHHhcCCCEE-EEcCccCCCCccCChhhHHHHHHHHHhhhc
Q psy2930 12 NIKAIFIADTHLLGPFR--G-HWFDKLRREWQMYKTFQTAVALHQPEHI-FVLGDLLDEGQYVGGEDFDNYVRRFYSLFS 87 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~pd~v-i~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 87 (293)
+++|++++|+|.--... . .-+.++ ..+.+.+.+..++.+++.+ +.+||++.+........-...++.+.. +
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~---~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~-~- 82 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQ---KTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNL-V- 82 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHH---HHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHH-H-
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHH---HHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHh-c-
Confidence 48999999999532211 1 111111 1233444444455666654 449999975432111112333433433 3
Q ss_pred CCCCceEEEecCCCCCCCCCCCCchhHHHHHHHhCCC-----------------CcceEEeCCEEEEEEeceeccCC---
Q psy2930 88 TPDGTELHVVPGNHDMGFHYRLHPYLNDRFSRAFNSS-----------------MVKLLSIKGSYFVLINSMALEGD--- 147 (293)
Q Consensus 88 ~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~i~lds~~~~~~--- 147 (293)
+.- .+++||||+.++. .....+......+ .+.++..+|+++-++.-..-...
T Consensus 83 ---g~D-a~~~GNHEfd~G~----~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~ 154 (337)
T d1usha2 83 ---GYD-AMAIGNHEFDNPL----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIG 154 (337)
T ss_dssp ---TCC-EEECCGGGGSSCH----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSS
T ss_pred ---CCe-EEEechhhhccch----HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeeccccccccccc
Confidence 222 6778999997642 1222232222221 24567889987755532211111
Q ss_pred --C----CCCCchhHHHHHHHHHHhhhcccCCCCCccccCCCCCCCEEeeccCCCcCCCCCCCCCCCchhhhhccccccc
Q psy2930 148 --G----CFLCKPAQDRISLISAKLKCCRKDRECPKSMKLGSYSQPIILQHFPLYRESDEECSGPDSAPDIEKRKKFRQR 221 (293)
Q Consensus 148 --~----~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
. ..+.... +.++....+|+.++ ..+-+|+++|.+........ .
T Consensus 155 ~~~~~~~~~~~d~~-~~~~~~~~~l~~~~------------~~D~iI~lsH~G~~~d~~~~--~---------------- 203 (337)
T d1usha2 155 NPEYFTDIEFRKPA-DEAKLVIQELQQTE------------KPDIIIAATHMGHYDNGEHG--S---------------- 203 (337)
T ss_dssp SCCCCTTEEECCHH-HHHHHHHHHHHHHT------------CCSEEEEEEESCCCGGGCCT--T----------------
T ss_pred CcccccCcccccHH-HHHHHHHHHHhhcc------------CCCEEEEecccCcccccccc--c----------------
Confidence 1 1111222 22333333444322 34568888999875432210 0
Q ss_pred ccccCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 222 WECISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 222 ~~~l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
..-....+...+...++++++.||+|....
T Consensus 204 -~~~~~~~la~~~~~~~vD~IvgGHsH~~~~ 233 (337)
T d1usha2 204 -NAPGDVEMARALPAGSLAMIVGGHSQDPVC 233 (337)
T ss_dssp -SCCCHHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred -ccchhHHHHHhCcccCceEEecCccCcccc
Confidence 000111233333334799999999998754
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.74 E-value=8.5e-08 Score=81.64 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=50.9
Q ss_pred CCCCCCCCCCceEEEEEecCCcCCCC-C------CchhHHHHhHHHHHHHHHHHHHhcCCC-EEEEcCccCCCCccC---
Q psy2930 2 NWPASPESINNIKAIFIADTHLLGPF-R------GHWFDKLRREWQMYKTFQTAVALHQPE-HIFVLGDLLDEGQYV--- 70 (293)
Q Consensus 2 ~w~~~~~~~~~~ri~~iSD~H~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~pd-~vi~~GDl~~~~~~~--- 70 (293)
.||..+..-+.++|++++|+|.--.. . ..+-+ +. .+...+.+..++..++ +++.+||++++....
T Consensus 1 ~~~~~~l~~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg-~a---~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~ 76 (322)
T d3c9fa2 1 SFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGD-FI---SFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT 76 (322)
T ss_dssp CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHH-HH---HHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS
T ss_pred CCCCCCCCcCEEEEEEEeccccCCCCccccccccCcccc-HH---HHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhc
Confidence 47777777778999999999963221 1 11111 11 1233344444556677 455799999964311
Q ss_pred ChhhHHHHHHHHHhhhcCCCCceE-EEecCCCCCCCC
Q psy2930 71 GGEDFDNYVRRFYSLFSTPDGTEL-HVVPGNHDMGFH 106 (293)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~v~GNHD~~~~ 106 (293)
..+. .. ..+++. .+++ ++++||||+++.
T Consensus 77 ~~~G-~~----~~~~mn---~lgyDa~t~GNHEfd~g 105 (322)
T d3c9fa2 77 SPNG-LK----STPIFI---KQDYDLLTIGNHELYLW 105 (322)
T ss_dssp SSTT-TT----THHHHT---TSCCSEECCCGGGSSSH
T ss_pred ccCC-hH----HHHHHh---ccCCcEEeecceecccc
Confidence 0110 11 122221 1233 888999999653
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.54 E-value=9.5e-07 Score=74.30 Aligned_cols=85 Identities=12% Similarity=0.017 Sum_probs=42.9
Q ss_pred ceEEEEEecCCcCCCCC-------CchhHHHHhHHHHHHHHHHHHHhc-CCCEEEEcCccCCCCccCChhhHHHHHHHHH
Q psy2930 12 NIKAIFIADTHLLGPFR-------GHWFDKLRREWQMYKTFQTAVALH-QPEHIFVLGDLLDEGQYVGGEDFDNYVRRFY 83 (293)
Q Consensus 12 ~~ri~~iSD~H~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~ 83 (293)
+++|++++|+|.--... .....-+. ++. .+.+.+++. ..-+++.+||++..........-...++.+.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~a---r~~-t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n 77 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVA---RRV-ALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 77 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHH---HHH-HHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHH---HHH-HHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHH
Confidence 47899999999643210 00000011 111 223333333 3467889999998543211111122233333
Q ss_pred hhhcCCCCceEEEecCCCCCCCC
Q psy2930 84 SLFSTPDGTELHVVPGNHDMGFH 106 (293)
Q Consensus 84 ~~~~~~~~~~~~~v~GNHD~~~~ 106 (293)
.++ .=.+++||||+.++
T Consensus 78 -~~g-----yDa~~~GNHEfd~G 94 (302)
T d2z1aa2 78 -RLR-----YRAMALGNHEFDLG 94 (302)
T ss_dssp -HTT-----CCEEECCGGGGTTC
T ss_pred -hcc-----cccccccchhhhcC
Confidence 331 12899999999764
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.99 E-value=2.9e-06 Score=67.59 Aligned_cols=64 Identities=20% Similarity=0.329 Sum_probs=40.3
Q ss_pred EEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHH-hcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 14 KAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVA-LHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 14 ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
||++|||+|. . ++. + .++.+.+. ..+.|.++++||+++.|+.+ .+ ..+++. ..
T Consensus 14 rI~vIgDIHG-----~--~~~------L-~~lL~~i~~~~~~d~lv~lGD~vDrGp~s--------~~-vl~~l~---~~ 67 (219)
T d1g5ba_ 14 NIWVVGDLHG-----C--YTN------L-MNKLDTIGFDNKKDLLISVGDLVDRGAEN--------VE-CLELIT---FP 67 (219)
T ss_dssp CEEEECCCTT-----C--HHH------H-HHHHHHHTCCTTTCEEEECSCCSSSSSCH--------HH-HHGGGG---ST
T ss_pred eEEEEEeccc-----C--HHH------H-HHHHHHcCCCCCCCEEEEeCCccccCccH--------HH-HHHHhh---cc
Confidence 8999999996 1 111 1 12222233 23568999999999988732 11 223331 23
Q ss_pred eEEEecCCCCC
Q psy2930 93 ELHVVPGNHDM 103 (293)
Q Consensus 93 ~~~~v~GNHD~ 103 (293)
.+.+|.||||.
T Consensus 68 ~~~~i~GNHE~ 78 (219)
T d1g5ba_ 68 WFRAVRGNHEQ 78 (219)
T ss_dssp TEEECCCHHHH
T ss_pred ccccccCcHHH
Confidence 57999999996
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.36 E-value=0.014 Score=46.75 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=48.5
Q ss_pred CceEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCC
Q psy2930 11 NNIKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPD 90 (293)
Q Consensus 11 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (293)
+.|||+++.|+ +|.+.. ..+.+.+.+..++.++|+||.-|-....|.-.+.+. ++++.+ .
T Consensus 3 ~~MkILfiGDI-vG~~GR----------~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~----~~eL~~-----~ 62 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGR----------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKH----YEFLKE-----A 62 (281)
T ss_dssp CCCEEEEECEE-BHHHHH----------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHH----HHHHHH-----H
T ss_pred ccceEEEEEcc-CCHHHH----------HHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHHH----HHHHHH-----h
Confidence 56999999999 433321 124455666667789999999999998887666433 333433 2
Q ss_pred CceEEEecCCCC
Q psy2930 91 GTELHVVPGNHD 102 (293)
Q Consensus 91 ~~~~~~v~GNHD 102 (293)
|+- .+..|||=
T Consensus 63 GvD-vIT~GNH~ 73 (281)
T d1t71a_ 63 GVN-YITMGNHT 73 (281)
T ss_dssp TCC-EEECCTTT
T ss_pred CCc-EEEcCchh
Confidence 444 67899994
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.022 Score=47.06 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=20.6
Q ss_pred cCHHHHHHHHhhcCccEEEecCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTH 248 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H 248 (293)
.+.....+.+++.+.++++-||.=
T Consensus 231 FG~~~~~~Fl~~n~l~lIIR~He~ 254 (324)
T d1s95a_ 231 FGPDVTKAFLEENNLDYIIRSHEV 254 (324)
T ss_dssp ECHHHHHHHHHHHTCCEEEECCSC
T ss_pred cCHHHHHHHHHHcCCcEEEEcCcc
Confidence 345688999999999999999983
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=95.07 E-value=0.029 Score=45.63 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=22.0
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNG 250 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~ 250 (293)
.+.....+.+++.+.++++-||.=..
T Consensus 222 fg~~~~~~Fl~~n~l~~IIR~He~~~ 247 (294)
T d1jk7a_ 222 FGAEVVAKFLHKHDLDLICRAHQVVE 247 (294)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCT
T ss_pred cCHHHHHHHHHHCCCCEEEEcCcccc
Confidence 35668899999999999999998654
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.05 E-value=0.029 Score=45.57 Aligned_cols=24 Identities=13% Similarity=0.133 Sum_probs=20.4
Q ss_pred cCHHHHHHHHhhcCccEEEecCCC
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTH 248 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H 248 (293)
.+.....+.+++.+.++++-||.=
T Consensus 215 fg~~~~~~Fl~~n~l~~IIR~He~ 238 (288)
T d3c5wc1 215 FGQDISETFNHANGLTLVSRAHQL 238 (288)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSC
T ss_pred cCHHHHHHHHHHCCCcEEEcCCCc
Confidence 446688999999999999999873
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.69 E-value=0.037 Score=47.79 Aligned_cols=28 Identities=14% Similarity=0.059 Sum_probs=23.1
Q ss_pred cCHHHHHHHHhhcCccEEEecCCCCCce
Q psy2930 225 ISKESTDMLLDYLNPRLVIDGHTHNGCH 252 (293)
Q Consensus 225 l~~~~~~~ll~~~~~~lvl~GH~H~~~~ 252 (293)
.+.....+.|++.+.++++-||.=...-
T Consensus 247 FG~~a~~~FL~~n~L~~IIR~HE~~~~G 274 (473)
T d1auia_ 247 YSYPAVCEFLQHNNLLSILRAHEAQDAG 274 (473)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTS
T ss_pred EChHHHHHHHHHcCCcEEEEcCcchhhh
Confidence 4556889999999999999999866543
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=91.20 E-value=2.5 Score=32.67 Aligned_cols=101 Identities=14% Similarity=0.228 Sum_probs=56.3
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++.|+ +|.+.. +.+.+.+.+ ++ .+.|+||.-|.....|.-.+++. ++.|.+ .|+
T Consensus 1 MkiLfiGDI-vG~~Gr----------~~v~~~Lp~-Lk-~~~DfVIaNgENaa~G~Git~k~----~~~L~~-----~GV 58 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGL----------RAVGLHLPD-IR-DRYDLVIANGENAARGKGLDRRS----YRLLRE-----AGV 58 (252)
T ss_dssp CEEEEECCB-CHHHHH----------HHHHHHHHH-HG-GGCSEEEEECTTTTTTSSCCHHH----HHHHHH-----HTC
T ss_pred CeEEEEecc-CCHHHH----------HHHHHHhHH-HH-hhCCEEEEeeeccCCCcCCCHHH----HHHHHH-----hCC
Confidence 799999999 422211 112233333 33 35799999999998887666433 333433 244
Q ss_pred eEEEecCCCCCCCCCCCCchhHHHHH--HHhCCC---------CcceEEeCCEEEEEEec
Q psy2930 93 ELHVVPGNHDMGFHYRLHPYLNDRFS--RAFNSS---------MVKLLSIKGSYFVLINS 141 (293)
Q Consensus 93 ~~~~v~GNHD~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~i~lds 141 (293)
- .+..|||=.... + ..+..+ ....+. .+.++..++.++.++|-
T Consensus 59 D-vIT~GNH~wdkk-e----i~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl 112 (252)
T d2z06a1 59 D-LVSLGNHAWDHK-E----VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQV 112 (252)
T ss_dssp C-EEECCTTTTSCT-T----HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEE
T ss_pred C-EEEcCcccccch-h----hhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEe
Confidence 4 678999943321 1 111111 111111 24677888988888753
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=89.28 E-value=0.39 Score=37.60 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=41.5
Q ss_pred eEEEEEecCCcCCCCCCchhHHHHhHHHHHHHHHHHHHhcCCCEEEEcCccCCCCccCChhhHHHHHHHHHhhhcCCCCc
Q psy2930 13 IKAIFIADTHLLGPFRGHWFDKLRREWQMYKTFQTAVALHQPEHIFVLGDLLDEGQYVGGEDFDNYVRRFYSLFSTPDGT 92 (293)
Q Consensus 13 ~ri~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vi~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (293)
|||+++.|+ +|.+.. ..+.+.+.+ ++ .+.|+||.-|.....|.-.+.+. ++.+.+ .|+
T Consensus 1 MkILfiGDI-vG~~Gr----------~~v~~~Lp~-lk-~~~DfVIaNgENaa~G~Git~~~----~~~l~~-----~Gv 58 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGR----------RVLQNHLPT-IR-PQFDFVIVNMENSAGGFGMHRDA----ARGALE-----AGA 58 (255)
T ss_dssp CEEEEECCB-BHHHHH----------HHHHHHHHH-HG-GGCSEEEEECTBTTTTSSCCHHH----HHHHHH-----HTC
T ss_pred CeEEEEecC-CCHHHH----------HHHHHHhHH-HH-hhCCEEEECCccCCCCcCCCHHH----HHHHHH-----cCC
Confidence 799999999 433211 112223333 33 35799999999999887666433 333433 234
Q ss_pred eEEEecCCCCC
Q psy2930 93 ELHVVPGNHDM 103 (293)
Q Consensus 93 ~~~~v~GNHD~ 103 (293)
- .+..|||=.
T Consensus 59 D-viT~GNH~w 68 (255)
T d1t70a_ 59 G-CLTLGNHAW 68 (255)
T ss_dssp S-EEECCTTTT
T ss_pred c-EEEcCchhh
Confidence 4 678999943
|