Psyllid ID: psy3031

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Secondary Structure (PSIPRED)
ccccccccccccEEEccccccccccccEEEcccccccccEEEcccEEEEEEEcccccEEEEEEcccccccccccccccccEEEEEEEcccccEEEcccccccccEEEEEcccccEEcEEEEccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccEEEccccEEEccccccHHHcccccEEEEcccccccEEEcccEEEEEEEcccccEEEEEEccccccccccccccHHEEEEEEEccccccEEEEcccccccEEEEEEEEEEcccccEEEEcccccccEEEEccc
Coil and Loop (DISEMBL)
msfrvvrsskfrhvygtalkrefcydnirvsksswdstfcavnPKFLAIIVESAgggafivlplnksswdstfcavnPKFLAIIVESAgggafivlplnkyhpalavewsltfdtsngvmfplydpdtnlvylcgk
Flexible Loop (DISEMBL)
msfrvvrsskfrhvygtalkrefcyDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Low Complexity Region (SEG)
MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Disordered region (IsUnstruct)
********SKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLC**
Disordered Region (DISOPRED)
***RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Disordered Region (DISEMBL)
********SKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Disordered Region (DISPRO)
***RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKYHPALAVEWSLTFDTSNGVMFPLYDPDTNLVYLCGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
Q9WUM3	484	Coronin-1B OS=Mus musculu	yes	N/A	0.492	0.138	0.720	1e-24
O89046	484	Coronin-1B OS=Rattus norv	yes	N/A	0.492	0.138	0.720	1e-24
Q9XS70	486	Coronin-1B OS=Oryctolagus	yes	N/A	0.492	0.137	0.705	4e-24
Q5NVK4	489	Coronin-1B OS=Pongo abeli	yes	N/A	0.492	0.137	0.705	4e-24
Q9BR76	489	Coronin-1B OS=Homo sapien	yes	N/A	0.492	0.137	0.705	4e-24
Q9WUM4	474	Coronin-1C OS=Mus musculu	no	N/A	0.470	0.135	0.687	1e-23
Q9ULV4	474	Coronin-1C OS=Homo sapien	no	N/A	0.470	0.135	0.687	1e-23
Q6QEF8	472	Coronin-6 OS=Homo sapiens	no	N/A	0.470	0.135	0.731	2e-23
Q920J3	472	Coronin-6 OS=Rattus norve	no	N/A	0.470	0.135	0.731	3e-23
Q920M5	471	Coronin-6 OS=Mus musculus	no	N/A	0.470	0.135	0.731	3e-23

>sp|Q9WUM3|COR1B_MOUSE Coronin-1B OS=Mus musculus GN=Coro1b PE=1 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/68 (72%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
          MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct: 1  MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query: 60 IVLPLNKS 67
          +VLPLNK+
Sbjct: 61 MVLPLNKT 68

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.
Mus musculus (taxid: 10090)

>sp|O89046|COR1B_RAT Coronin-1B OS=Rattus norvegicus GN=Coro1b PE=1 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/68 (72%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
          MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct: 1  MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query: 60 IVLPLNKS 67
          +VLPLNK+
Sbjct: 61 MVLPLNKT 68

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Rattus norvegicus (taxid: 10116)

>sp|Q9XS70|COR1B_RABIT Coronin-1B OS=Oryctolagus cuniculus GN=CORO1B PE=1 SV=1

 Score =  109 bits (273), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
          MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct: 1  MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query: 60 IVLPLNKS 67
          +VLPL+K+
Sbjct: 61 LVLPLSKT 68

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q5NVK4|COR1B_PONAB Coronin-1B OS=Pongo abelii GN=CORO1B PE=2 SV=2

 Score =  109 bits (273), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
          MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct: 1  MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query: 60 IVLPLNKS 67
          +VLPL+K+
Sbjct: 61 LVLPLSKT 68

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Pongo abelii (taxid: 9601)

>sp|Q9BR76|COR1B_HUMAN Coronin-1B OS=Homo sapiens GN=CORO1B PE=1 SV=1

 Score =  109 bits (273), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 61/68 (89%), Gaps = 1/68 (1%)

Query: 1  MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
          MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct: 1  MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query: 60 IVLPLNKS 67
          +VLPL+K+
Sbjct: 61 LVLPLSKT 68

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q9WUM4|COR1C_MOUSE Coronin-1C OS=Mus musculus GN=Coro1c PE=1 SV=2

 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query: 4  RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
          RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AII+E++GGGAF+VLP
Sbjct: 3  RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62

Query: 64 LNKS 67
          L+K+
Sbjct: 63 LHKT 66

May be involved in cytokinesis, motility, and signal transduction.

Mus musculus (taxid: 10090)

>sp|Q9ULV4|COR1C_HUMAN Coronin-1C OS=Homo sapiens GN=CORO1C PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query: 4  RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
          RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AII+E++GGGAF+VLP
Sbjct: 3  RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62

Query: 64 LNKS 67
          L+K+
Sbjct: 63 LHKT 66

May be involved in cytokinesis, motility, and signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q6QEF8|CORO6_HUMAN Coronin-6 OS=Homo sapiens GN=CORO6 PE=2 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/67 (73%), Positives = 57/67 (85%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS RVVR SKFRHV+G A K +  Y++IRVSK +WDS+FCAVNPKFLAIIVE+ GGGAFI
Sbjct: 1  MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFI 60

Query: 61 VLPLNKS 67
          VLPL K+
Sbjct: 61 VLPLAKT 67

Homo sapiens (taxid: 9606)

>sp|Q920J3|CORO6_RAT Coronin-6 OS=Rattus norvegicus GN=Coro6 PE=2 SV=2

 Score =  107 bits (266), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS RVVR SKFRHV+G A K +  Y++IRVSK +WDS FCAVNPKFLAIIVE+ GGGAFI
Sbjct: 1  MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 61 VLPLNKS 67
          VLPL K+
Sbjct: 61 VLPLAKT 67

Rattus norvegicus (taxid: 10116)

>sp|Q920M5|CORO6_MOUSE Coronin-6 OS=Mus musculus GN=Coro6 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS RVVR SKFRHV+G A K +  Y++IRVSK +WDS FCAVNPKFLAIIVE+ GGGAFI
Sbjct: 1  MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 61 VLPLNKS 67
          VLPL K+
Sbjct: 61 VLPLAKT 67

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
350424644	494	PREDICTED: coronin-1C-like [Bombus impat	0.455	0.125	0.969	1e-30
312371787	609	hypothetical protein AND_21650 [Anophele	0.455	0.101	0.954	5e-30
307212067	492	Coronin-6 [Harpegnathos saltator]	0.455	0.126	0.954	5e-30
157118302	574	coronin [Aedes aegypti] gi|108883283|gb|	0.485	0.114	0.954	7e-30
157118304	567	coronin [Aedes aegypti] gi|108883284|gb|	0.485	0.116	0.954	7e-30
322795836	544	hypothetical protein SINV_14713 [Solenop	0.455	0.113	0.939	1e-29
189238186	488	PREDICTED: similar to GA21791-PA [Tribol	0.455	0.127	0.939	1e-29
156549506	494	PREDICTED: coronin-6-like isoform 1 [Nas	0.485	0.133	0.969	2e-29
340726722	494	PREDICTED: coronin-1C-like [Bombus terre	0.455	0.125	0.969	2e-29
383851504	493	PREDICTED: coronin-6-like [Megachile rot	0.485	0.133	0.969	2e-29

>gi|350424644|ref|XP_003493864.1| PREDICTED: coronin-1C-like [Bombus impatiens]

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/66 (96%), Positives = 64/66 (96%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYGTALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGTALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371787|gb|EFR19886.1| hypothetical protein AND_21650 [Anopheles darlingi]

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/66 (95%), Positives = 63/66 (95%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYG ALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212067|gb|EFN87950.1| Coronin-6 [Harpegnathos saltator]

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/66 (95%), Positives = 63/66 (95%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYGT LKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGTPLKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118302|ref|XP_001653160.1| coronin [Aedes aegypti] gi|108883283|gb|EAT47508.1| AAEL001360-PA [Aedes aegypti]

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/66 (95%), Positives = 63/66 (95%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYG ALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118304|ref|XP_001653161.1| coronin [Aedes aegypti] gi|108883284|gb|EAT47509.1| AAEL001360-PB [Aedes aegypti]

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/66 (95%), Positives = 63/66 (95%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYG ALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795836|gb|EFZ18515.1| hypothetical protein SINV_14713 [Solenopsis invicta]

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/66 (93%), Positives = 63/66 (95%)

Query: 1   MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
           MSFRVVR+SKFRHVYGT LKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 50  MSFRVVRTSKFRHVYGTPLKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 109

Query: 61  VLPLNK 66
           VLP NK
Sbjct: 110 VLPHNK 115

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238186|ref|XP_966734.2| PREDICTED: similar to GA21791-PA [Tribolium castaneum] gi|270008836|gb|EFA05284.1| hypothetical protein TcasGA2_TC015441 [Tribolium castaneum]

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/66 (93%), Positives = 63/66 (95%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYG ALKRE CYDNIRVSKSSWD+TFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDATFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156549506|ref|XP_001604802.1| PREDICTED: coronin-6-like isoform 1 [Nasonia vitripennis] gi|345487367|ref|XP_003425682.1| PREDICTED: coronin-6-like isoform 2 [Nasonia vitripennis]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/66 (96%), Positives = 64/66 (96%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYGTALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGTALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726722|ref|XP_003401702.1| PREDICTED: coronin-1C-like [Bombus terrestris]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/66 (96%), Positives = 64/66 (96%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYGTALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGTALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851504|ref|XP_003701272.1| PREDICTED: coronin-6-like [Megachile rotundata]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/66 (96%), Positives = 64/66 (96%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MSFRVVRSSKFRHVYGTALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct: 1  MSFRVVRSSKFRHVYGTALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query: 61 VLPLNK 66
          VLP NK
Sbjct: 61 VLPHNK 66

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
FB|FBgn0033109	528	coro "coro" [Drosophila melano	0.485	0.125	0.954	1.2e-38
ZFIN|ZDB-GENE-030114-6	474	coro1ca "coronin, actin bindin	0.470	0.135	0.703	8.2e-31
UNIPROTKB|F1MK51	330	CORO1B "Coronin" [Bos taurus (	0.470	0.193	0.687	1.3e-30
UNIPROTKB|Q5ZI60	474	CORO1C "Coronin" [Gallus gallu	0.470	0.135	0.687	1.4e-30
UNIPROTKB|F1NXA5	475	CORO1C "Coronin" [Gallus gallu	0.470	0.134	0.687	1.4e-30
MGI|MGI:1345963	484	Coro1b "coronin, actin binding	0.492	0.138	0.720	2.5e-30
RGD|2382	484	Coro1b "coronin, actin-binding	0.492	0.138	0.720	2.5e-30
UNIPROTKB|G3V940	484	Coro1b "Coronin" [Rattus norve	0.492	0.138	0.720	2.5e-30
UNIPROTKB|A2VDN8	474	CORO1C "Coronin" [Bos taurus (	0.470	0.135	0.687	2.7e-30
UNIPROTKB|F1Q1F6	474	CORO1C "Coronin" [Canis lupus	0.470	0.135	0.687	2.7e-30

FB|FBgn0033109 coro "coro" [Drosophila melanogaster (taxid:7227)]

 Score = 320 (117.7 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 63/66 (95%), Positives = 63/66 (95%)

Query:     1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
             MSFRVVRSSKFRHVYG ALKRE CYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI
Sbjct:     1 MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60

Query:    61 VLPLNK 66
             VLP NK
Sbjct:    61 VLPHNK 66

GO:0003779 "actin binding" evidence=ISS

GO:0015629 "actin cytoskeleton" evidence=IBA;NAS

GO:0007527 "adult somatic muscle development" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

GO:0051015 "actin filament binding" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

ZFIN|ZDB-GENE-030114-6 coro1ca "coronin, actin binding protein, 1Ca" [Danio rerio (taxid:7955)]

 Score = 253 (94.1 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
 Identities = 45/64 (70%), Positives = 58/64 (90%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS FCAVNPKF+A+IVE++GGGAF+VLP
Sbjct:     4 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSAFCAVNPKFVALIVEASGGGAFMVLP 63

Query:    64 LNKS 67
             L+K+
Sbjct:    64 LHKT 67

GO:0051015 "actin filament binding" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0015629 "actin cytoskeleton" evidence=IBA

UNIPROTKB|F1MK51 CORO1B "Coronin" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
 Identities = 44/64 (68%), Positives = 58/64 (90%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             +VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF+VLP
Sbjct:     4 KVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLP 63

Query:    64 LNKS 67
             L+K+
Sbjct:    64 LSKT 67

GO:0051015 "actin filament binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5ZI60 CORO1C "Coronin" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AIIV+++GGGAF+VLP
Sbjct:     3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIVDASGGGAFLVLP 62

Query:    64 LNKS 67
             L+K+
Sbjct:    63 LHKT 66

GO:0015629 "actin cytoskeleton" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0051015 "actin filament binding" evidence=IBA

UNIPROTKB|F1NXA5 CORO1C "Coronin" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AIIV+++GGGAF+VLP
Sbjct:     4 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIVDASGGGAFLVLP 63

Query:    64 LNKS 67
             L+K+
Sbjct:    64 LHKT 67

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

MGI|MGI:1345963 Coro1b "coronin, actin binding protein 1B" [Mus musculus (taxid:10090)]

 Score = 264 (98.0 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
 Identities = 49/68 (72%), Positives = 61/68 (89%)

Query:     1 MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
             MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct:     1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query:    60 IVLPLNKS 67
             +VLPLNK+
Sbjct:    61 MVLPLNKT 68

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0051015 "actin filament binding" evidence=IBA

RGD|2382 Coro1b "coronin, actin-binding protein, 1B" [Rattus norvegicus (taxid:10116)]

 Score = 264 (98.0 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
 Identities = 49/68 (72%), Positives = 61/68 (89%)

Query:     1 MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
             MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct:     1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query:    60 IVLPLNKS 67
             +VLPLNK+
Sbjct:    61 MVLPLNKT 68

GO:0005737 "cytoplasm" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0051015 "actin filament binding" evidence=IBA

UNIPROTKB|G3V940 Coro1b "Coronin" [Rattus norvegicus (taxid:10116)]

 Score = 264 (98.0 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
 Identities = 49/68 (72%), Positives = 61/68 (89%)

Query:     1 MSFR-VVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAF 59
             MSFR VVR SKFRHV+G  +K + CY++IRVS+ +WDSTFCAVNPKFLA+IVE++GGGAF
Sbjct:     1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60

Query:    60 IVLPLNKS 67
             +VLPLNK+
Sbjct:    61 MVLPLNKT 68

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

UNIPROTKB|A2VDN8 CORO1C "Coronin" [Bos taurus (taxid:9913)]

 Score = 253 (94.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AII+E++GGGAF+VLP
Sbjct:     3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62

Query:    64 LNKS 67
             L+K+
Sbjct:    63 LHKT 66

GO:0051015 "actin filament binding" evidence=ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS

GO:0015629 "actin cytoskeleton" evidence=ISS

UNIPROTKB|F1Q1F6 CORO1C "Coronin" [Canis lupus familiaris (taxid:9615)]

 Score = 253 (94.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query:     4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
             RVVR SKFRHV+G A+K + CYD+IRVS+ +WDS+FCAVNP+F+AII+E++GGGAF+VLP
Sbjct:     3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62

Query:    64 LNKS 67
             L+K+
Sbjct:    63 LHKT 66

GO:0051015 "actin filament binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9WUM3	COR1B_MOUSE	No assigned EC number	0.7205	0.4926	0.1384	yes	N/A
Q21624	CORO_CAEEL	No assigned EC number	0.5396	0.4558	0.1021	yes	N/A
O89046	COR1B_RAT	No assigned EC number	0.7205	0.4926	0.1384	yes	N/A
Q5NVK4	COR1B_PONAB	No assigned EC number	0.7058	0.4926	0.1370	yes	N/A
Q9BR76	COR1B_HUMAN	No assigned EC number	0.7058	0.4926	0.1370	yes	N/A
Q9XS70	COR1B_RABIT	No assigned EC number	0.7058	0.4926	0.1378	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
pfam08953	65	pfam08953, DUF1899, Domain of unknown function (DU	3e-38
pfam08954	136	pfam08954, DUF1900, Domain of unknown function (DU	3e-09

>gnl|CDD|149883 pfam08953, DUF1899, Domain of unknown function (DUF1899)

 Score =  123 bits (311), Expect = 3e-38
 Identities = 45/64 (70%), Positives = 56/64 (87%)

Query: 4  RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLP 63
          R VRSSKFRHV+G   K+E CY++IR+SK++WDS FCAVNPKFLA+I E++GGGAF VLP
Sbjct: 1  RFVRSSKFRHVFGQPAKKEQCYEDIRISKNAWDSNFCAVNPKFLAVIWEASGGGAFAVLP 60

Query: 64 LNKS 67
          LNK+
Sbjct: 61 LNKT 64

This set of domains is found in various eukaryotic proteins. Function is unknown. Length = 65

>gnl|CDD|220080 pfam08954, DUF1900, Domain of unknown function (DUF1900)

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 110 SLTFDTSNGVMFPLYDPDTNLVYLCGK 136
           +   DTS+GV+ P YD DT L+YL GK
Sbjct: 4   TEELDTSSGVLIPFYDEDTGLLYLAGK 30

This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
KOG0303|consensus	472		100.0
PF08953	65	DUF1899: Domain of unknown function (DUF1899); Int	99.97
KOG0303|consensus	472		99.9
KOG1445|consensus	1012		99.86
PTZ00421	493	coronin; Provisional	99.76
KOG1445|consensus	1012		99.69
PF08953	65	DUF1899: Domain of unknown function (DUF1899); Int	99.62
PTZ00420	568	coronin; Provisional	99.6
PTZ00421	493	coronin; Provisional	98.72
PTZ00420	568	coronin; Provisional	98.49
PRK03629	429	tolB translocation protein TolB; Provisional	82.48

>KOG0303|consensus

Probab=100.00  E-value=1e-37  Score=262.90  Aligned_cols=88  Identities=56%  Similarity=1.012  Sum_probs=86.0

Q ss_pred             CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031           1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------   68 (136)
Q Consensus         1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------   68 (136)
                      |++|+||+|||||||||+.|+|+||+|||++..+||++|||+|+||+||.|.++|||+|.|||+.++|            
T Consensus         1 m~~~~vR~SKfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GH   80 (472)
T KOG0303|consen    1 MSRHVVRSSKFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGH   80 (472)
T ss_pred             CcchhhhhhhhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCc
Confidence            88899999999999999999999999999999999999999999999999999999999999999999            


Q ss_pred             ----ccCccccCCCceEEEEEeec
Q psy3031          69 ----WDSTFCAVNPKFLAIIVESA   88 (136)
Q Consensus        69 ----~D~~f~p~n~~~lAv~~e~~   88 (136)
                          .|..|||||++.||+++||+
T Consensus        81 t~~vLDi~w~PfnD~vIASgSeD~  104 (472)
T KOG0303|consen   81 TAPVLDIDWCPFNDCVIASGSEDT  104 (472)
T ss_pred             cccccccccCccCCceeecCCCCc
Confidence                59999999999999999988

>PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins

Probab=99.97  E-value=4.4e-31  Score=174.13  Aligned_cols=65  Identities=71%  Similarity=1.137  Sum_probs=40.3

Q ss_pred             CcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc
Q psy3031           4 RVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS   68 (136)
Q Consensus         4 r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g   68 (136)
                      ||||+||||||||+++|||.||+|||+++++||+|+||||+||+|++|+++|||+++|||++++|
T Consensus         1 r~vR~SKfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~~G   65 (65)
T PF08953_consen    1 RFVRSSKFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNKTG   65 (65)
T ss_dssp             ------TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT--E
T ss_pred             CcccccccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCCCC
Confidence            68999999999999999999999999999999999999999999999998899999999999986

The function is unknown. ; PDB: 2B4E_A 2AQ5_A.

>KOG0303|consensus

Probab=99.90  E-value=6.5e-25  Score=185.55  Aligned_cols=90  Identities=38%  Similarity=0.742  Sum_probs=85.1

Q ss_pred             CCcEEEEeeecC-CCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc--------------cceeee
Q psy3031          43 NPKFLAIIVESA-GGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY--------------HPALAV  107 (136)
Q Consensus        43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~--------------~~vld~  107 (136)
                      .+||+||..|.. ...||..|+++++.||++||++||+|||+++|++|||+|+||||+++              +||||+
T Consensus         8 ~SKfRHVFgq~~K~e~CYddIrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi   87 (472)
T KOG0303|consen    8 SSKFRHVFGQPVKNDQCYDDIRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDI   87 (472)
T ss_pred             hhhhHHHhccccchhhhhcceeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCcccccccc
Confidence            589999999976 45799999999999999999999999999999999999999999886              799999


Q ss_pred             ecccccc-----------------CCCcceeeccCCCCceee
Q psy3031         108 EWSLTFD-----------------TSNGVMFPLYDPDTNLVY  132 (136)
Q Consensus       108 ~~~p~~d-----------------~~~g~~~~~~d~d~~l~~  132 (136)
                      +||||+|                 |++||.++++.|.+.|.|
T Consensus        88 ~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~g  129 (472)
T KOG0303|consen   88 DWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYG  129 (472)
T ss_pred             ccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEee
Confidence            9999998                 899999999999999876

>KOG1445|consensus

Probab=99.86  E-value=3.9e-22  Score=176.68  Aligned_cols=86  Identities=28%  Similarity=0.351  Sum_probs=82.4

Q ss_pred             CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031           1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------   68 (136)
Q Consensus         1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------   68 (136)
                      |+|| |++|||||...+++|||.|+.+|++++.+.++|.|++++.|+|++|+. -||.++|+|++..|            
T Consensus         1 MawR-F~aSKfknt~p~vPk~E~~i~di~vG~~~~~~n~I~aS~~flAFn~e~-~G~~lgvlPl~~~Gr~~r~i~~l~~H   78 (1012)
T KOG1445|consen    1 MAWR-FAASKFKNTTPKVPKKEETIFDIPVGNLSCTNNGIHASADFLAFNIEG-EGGKLGVLPLTAKGRRTRDIGILAAH   78 (1012)
T ss_pred             Cccc-cchhhcccCCCCCCchhhheeecccccccccCCCcccccceEEEeecC-CCceEEEEeccccCccccccceeecc
Confidence            9999 999999999999999999999999999999999999999999999996 57899999999988            


Q ss_pred             ----ccCccccCCCceEEEEEeec
Q psy3031          69 ----WDSTFCAVNPKFLAIIVESA   88 (136)
Q Consensus        69 ----~D~~f~p~n~~~lAv~~e~~   88 (136)
                          +|..|+||.+.+||+++.|.
T Consensus        79 ~d~VtDl~FspF~D~LLAT~S~D~  102 (1012)
T KOG1445|consen   79 GDQVTDLGFSPFADELLATCSRDE  102 (1012)
T ss_pred             cceeeccCccccchhhhhcccCCC
Confidence                69999999999999999876

>PTZ00421 coronin; Provisional

Probab=99.76  E-value=2.2e-18  Score=150.08  Aligned_cols=101  Identities=23%  Similarity=0.320  Sum_probs=83.8

Q ss_pred             ccCCceeecccCcccccccccccccCccC-CCceeeCCcEEEEeeecCCCceEEEecCCCCc----------------cc
Q psy3031           8 SSKFRHVYGTALKREFCYDNIRVSKSSWD-STFCAVNPKFLAIIVESAGGGAFIVLPLNKSS----------------WD   70 (136)
Q Consensus         8 ~SKfRHv~g~~~kke~~~~~ir~s~~~~d-~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g----------------~D   70 (136)
                      +||||||||+++|||.||+|||+++.+|| +++|++|.+|+|++|+..||  .+|+++++.|                +|
T Consensus         3 ~sk~rh~~g~~~k~~~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg--~~v~~~~~~G~~~~~~~~l~GH~~~V~~   80 (493)
T PTZ00421          3 VSRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGS--TAVLKHTDYGKLASNPPILLGQEGPIID   80 (493)
T ss_pred             cccccccccccCCcccceeccccccccCCCCCcEeECCceEEEEEecCCc--eEEeeccccccCCCCCceEeCCCCCEEE
Confidence            69999999999999999999999999999 89999999999999997554  4788887655                57


Q ss_pred             CccccCCCceEEEEEeecCCceEEEEeCC-----------------Cccceeeeeccccc
Q psy3031          71 STFCAVNPKFLAIIVESAGGGAFIVLPLN-----------------KYHPALAVEWSLTF  113 (136)
Q Consensus        71 ~~f~p~n~~~lAv~~e~~gGG~f~V~pl~-----------------~~~~vld~~~~p~~  113 (136)
                      ..|+|+|+++||++++++   .+-|--+.                 ....|..++|+|..
T Consensus        81 v~fsP~d~~~LaSgS~Dg---tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~  137 (493)
T PTZ00421         81 VAFNPFDPQKLFTASEDG---TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA  137 (493)
T ss_pred             EEEcCCCCCEEEEEeCCC---EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC
Confidence            889999999999998765   33333221                 12678999999864

>KOG1445|consensus

Probab=99.69  E-value=6.3e-17  Score=143.86  Aligned_cols=82  Identities=29%  Similarity=0.399  Sum_probs=70.2

Q ss_pred             cccccCCceeecccCcccccccccccc---cCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc-------------
Q psy3031           5 VVRSSKFRHVYGTALKREFCYDNIRVS---KSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS-------------   68 (136)
Q Consensus         5 ~vr~SKfRHv~g~~~kke~~~~~ir~s---~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g-------------   68 (136)
                      +-+.|||||+.|++.+|+.+|+|+|--   ...+++.||+ |.+++|||+.. .||.++|+.+++.|             
T Consensus       550 ~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfca-n~~rvAVPL~g-~gG~iai~el~~PGrLPDgv~p~l~Ng  627 (1012)
T KOG1445|consen  550 VGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCA-NNKRVAVPLAG-SGGVIAIYELNEPGRLPDGVMPGLFNG  627 (1012)
T ss_pred             eccchheeeccCccccchhhhhhhhcccccCCCccCceee-ccceEEEEecC-CCceEEEEEcCCCCCCCcccccccccC
Confidence            446799999999999999999998733   3444555555 99999999885 58899999999999             


Q ss_pred             ---ccCccccCCCceEEEEEeec
Q psy3031          69 ---WDSTFCAVNPKFLAIIVESA   88 (136)
Q Consensus        69 ---~D~~f~p~n~~~lAv~~e~~   88 (136)
                         +|+.|.||++..||++.|++
T Consensus       628 t~vtDl~WdPFD~~rLAVa~ddg  650 (1012)
T KOG1445|consen  628 TLVTDLHWDPFDDERLAVATDDG  650 (1012)
T ss_pred             ceeeecccCCCChHHeeecccCc
Confidence               69999999999999999986

>PF08953 DUF1899: Domain of unknown function (DUF1899); InterPro: IPR015048 This set of proteins are found in various eukaryotic proteins

Probab=99.62  E-value=7.1e-17  Score=106.47  Aligned_cols=59  Identities=47%  Similarity=0.750  Sum_probs=37.6

Q ss_pred             CCcEEEEeeecC-CCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc
Q psy3031          43 NPKFLAIIVESA-GGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY  101 (136)
Q Consensus        43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~  101 (136)
                      .+||+++..+.. ...+|..|+++.+.||.++|++|++|||+.||++|||+|+||||+++
T Consensus         5 ~SKfRhv~g~~~kke~~y~~i~vs~~~~d~n~i~~N~kfiA~~~~~~GGG~~~Vlpl~~~   64 (65)
T PF08953_consen    5 SSKFRHVFGKPAKKEECYDNIRVSTSSWDSNFIAANPKFIAVPWESGGGGAFAVLPLNKT   64 (65)
T ss_dssp             --TTTT-EEEE--GGGSEES--B-----SS-CEEE-SSEEEEEB--SSS--EEEEETT--
T ss_pred             ccccccccCccCCccccCcCEEEeCccccCCeEEEcCCEEEEEeccCCccEEEEEeCCCC
Confidence            589999999977 44799999999999999999999999999999999999999999986

The function is unknown. ; PDB: 2B4E_A 2AQ5_A.

>PTZ00420 coronin; Provisional

Probab=99.60  E-value=1.7e-15  Score=134.27  Aligned_cols=104  Identities=21%  Similarity=0.288  Sum_probs=85.8

Q ss_pred             CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031           1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------   68 (136)
Q Consensus         1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------   68 (136)
                      |+ |+   |||||+||++.+  .||+|||+++..|++++|++|++|+|++|+..|||.++++++.+.+            
T Consensus         1 m~-~~---~~~~~~~~~~~~--~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~   74 (568)
T PTZ00420          1 MY-NV---PLIKNLYPDPSN--NLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHT   74 (568)
T ss_pred             CC-cc---chhhhcCCchhh--CeeccEEccccccCceeEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCC
Confidence            67 63   999999999887  6799999999999999999999999999998889999999987543            


Q ss_pred             ---ccCccccCCCceEEEEEeecCCceEEEEeCC------------------Cccceeeeeccccc
Q psy3031          69 ---WDSTFCAVNPKFLAIIVESAGGGAFIVLPLN------------------KYHPALAVEWSLTF  113 (136)
Q Consensus        69 ---~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~------------------~~~~vld~~~~p~~  113 (136)
                         +|..|+|+++++||++++++   .+-|--+.                  ....|..++|+|..
T Consensus        75 ~~V~~lafsP~~~~lLASgS~Dg---tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g  137 (568)
T PTZ00420         75 SSILDLQFNPCFSEILASGSEDL---TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMN  137 (568)
T ss_pred             CCEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCC
Confidence               57899999999999998765   33333221                  12578899999854

>PTZ00421 coronin; Provisional

Probab=98.72  E-value=1.7e-08  Score=88.41  Aligned_cols=70  Identities=23%  Similarity=0.316  Sum_probs=61.1

Q ss_pred             CCcEEEEeeecC-CCceEEEecCCCCccc-CccccCCCceEEEEEeecCCceEEEEeCCCc--------------cceee
Q psy3031          43 NPKFLAIIVESA-GGGAFIVLPLNKSSWD-STFCAVNPKFLAIIVESAGGGAFIVLPLNKY--------------HPALA  106 (136)
Q Consensus        43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D-~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~--------------~~vld  106 (136)
                      .+||+|+..+.. ...+|..|+++..+|| .+++++|++|+|+.|+..||+  +|+|+++.              ++|++
T Consensus         3 ~sk~rh~~g~~~k~~~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~--~v~~~~~~G~~~~~~~~l~GH~~~V~~   80 (493)
T PTZ00421          3 VSRFRHTQGVPARPDRHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGST--AVLKHTDYGKLASNPPILLGQEGPIID   80 (493)
T ss_pred             cccccccccccCCcccceeccccccccCCCCCcEeECCceEEEEEecCCce--EEeeccccccCCCCCceEeCCCCCEEE
Confidence            489999999977 4479999999999999 899999999999999987765  78888653              68999


Q ss_pred             eecccccc
Q psy3031         107 VEWSLTFD  114 (136)
Q Consensus       107 ~~~~p~~d  114 (136)
                      ++|+||++
T Consensus        81 v~fsP~d~   88 (493)
T PTZ00421         81 VAFNPFDP   88 (493)
T ss_pred             EEEcCCCC
Confidence            99999865

>PTZ00420 coronin; Provisional

Probab=98.49  E-value=1.2e-07  Score=84.59  Aligned_cols=70  Identities=21%  Similarity=0.289  Sum_probs=63.1

Q ss_pred             CcEEEEeeecCCCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc-------------cceeeeecc
Q psy3031          44 PKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY-------------HPALAVEWS  110 (136)
Q Consensus        44 ~kfiAv~~~~~gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~-------------~~vld~~~~  110 (136)
                      ++|++++.+. -..+|..|+++...+|++++++|++|+|+.|+..|||++.|+++.+.             ++|++++|+
T Consensus         5 ~~~~~~~~~~-~~~~y~diri~~~~~~s~~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafs   83 (568)
T PTZ00420          5 PLIKNLYPDP-SNNLFDDLRICSRVIDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFN   83 (568)
T ss_pred             chhhhcCCch-hhCeeccEEccccccCceeEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEc
Confidence            7899999885 35689999999999999999999999999999999999999998642             689999999


Q ss_pred             cccc
Q psy3031         111 LTFD  114 (136)
Q Consensus       111 p~~d  114 (136)
                      |+++
T Consensus        84 P~~~   87 (568)
T PTZ00420         84 PCFS   87 (568)
T ss_pred             CCCC
Confidence            9864

>PRK03629 tolB translocation protein TolB; Provisional

Probab=82.48  E-value=7.3  Score=33.30  Aligned_cols=43  Identities=9%  Similarity=0.136  Sum_probs=30.9

Q ss_pred             cCccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031          70 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF  113 (136)
Q Consensus        70 D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~  113 (136)
                      ++.|.| |.++|+..+++.+.+.+.++.++..         +.+.+.+|+|++
T Consensus       378 ~p~~Sp-DG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~~p~Wsp~~  429 (429)
T PRK03629        378 TPSIAP-NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL  429 (429)
T ss_pred             CceECC-CCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcCCcccCCCC
Confidence            356664 7778888888777666777776432         567888999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		2e-22
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		1e-05
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		2e-22
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		1e-05

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 58/67 (86%)
Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS +VVRSSKFRHV+G   K + CY+++RVS+++WDS FCAVNPKF+A+I E++GGGAF+
Sbjct: 1  MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALIXEASGGGAFL 60
Query: 61 VLPLNKS 67
          VLPL K+
Sbjct: 61 VLPLGKT 67

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 113 FDTSNGVMFPLYDPDTNLVYLCGK 136
            DTS+GV+ P +DPDTN+VYLCGK
Sbjct: 264 LDTSSGVLLPFFDPDTNIVYLCGK 287

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 58/67 (86%)
Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS +VVRSSKFRHV+G   K + CY+++RVS+++WDS FCAVNPKF+A+I E++GGGAF+
Sbjct: 1  MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFL 60
Query: 61 VLPLNKS 67
          VLPL K+
Sbjct: 61 VLPLGKT 67

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 113 FDTSNGVMFPLYDPDTNLVYLCGK 136
            DTS+GV+ P +DPDTN+VYLCGK
Sbjct: 264 LDTSSGVLLPFFDPDTNIVYLCGK 287

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	1e-31

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402

 Score =  115 bits (289), Expect = 1e-31
 Identities = 43/68 (63%), Positives = 58/68 (85%)

Query: 1  MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
          MS +VVRSSKFRHV+G   K + CY+++RVS+++WDS FCAVNPKF+A+I E++GGGAF+
Sbjct: 1  MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFL 60

Query: 61 VLPLNKSS 68
          VLPL K+ 
Sbjct: 61 VLPLGKTG 68

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.72
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	97.95

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.72  E-value=1.4e-17  Score=133.19  Aligned_cols=110  Identities=47%  Similarity=0.838  Sum_probs=88.2

Q ss_pred             CCCCcccccCCceeecccCcccccccccccccCccCCCceeeCCcEEEEeeecCCCceEEEecCCCCc------------
Q psy3031           1 MSFRVVRSSKFRHVYGTALKREFCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSS------------   68 (136)
Q Consensus         1 M~~r~vr~SKfRHv~g~~~kke~~~~~ir~s~~~~d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g------------   68 (136)
                      |++|++|+|||||+||++.|+|.+|++++++...|+.++|++|+++.++.+..+++|.+.|.++.+.+            
T Consensus         1 ~~~~~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h   80 (402)
T 2aq5_A            1 MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH   80 (402)
T ss_dssp             -------CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC
T ss_pred             CCCcccCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecC
Confidence            88889999999999999999999999999999999999999999999999887778999999986653            


Q ss_pred             ----ccCccccCCCceEEEEEeecCCceEEEEeCCC-----------------ccceeeeeccccc
Q psy3031          69 ----WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNK-----------------YHPALAVEWSLTF  113 (136)
Q Consensus        69 ----~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~-----------------~~~vld~~~~p~~  113 (136)
                          ++..|+|++.++||+++++   |.+.|.-+..                 ..+|..++|+|..
T Consensus        81 ~~~V~~~~~~p~~~~~l~s~s~d---g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  143 (402)
T 2aq5_A           81 TAPVLDIAWCPHNDNVIASGSED---CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA  143 (402)
T ss_dssp             SSCEEEEEECTTCTTEEEEEETT---SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB
T ss_pred             CCCEEEEEeCCCCCCEEEEEeCC---CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC
Confidence                4678899899999999876   3555554422                 2678999999875

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=97.95  E-value=3.8e-06  Score=66.67  Aligned_cols=72  Identities=43%  Similarity=0.856  Sum_probs=62.0

Q ss_pred             CCcEEEEeeecC-CCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCCc--------------cceeee
Q psy3031          43 NPKFLAIIVESA-GGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY--------------HPALAV  107 (136)
Q Consensus        43 n~kfiAv~~~~~-gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~--------------~~vld~  107 (136)
                      ++||+++..+.. ...++..++++...||.+++++|++++++.+..+++|.+.|.++++.              ++|.++
T Consensus         8 ~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~   87 (402)
T 2aq5_A            8 SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDI   87 (402)
T ss_dssp             CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEE
T ss_pred             CCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEE
Confidence            577888887765 34689999999999999999999999999999899999999998542              689999


Q ss_pred             ecccccc
Q psy3031         108 EWSLTFD  114 (136)
Q Consensus       108 ~~~p~~d  114 (136)
                      +|+|+++
T Consensus        88 ~~~p~~~   94 (402)
T 2aq5_A           88 AWCPHND   94 (402)
T ss_dssp             EECTTCT
T ss_pred             EeCCCCC
Confidence            9999654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	87.29
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	85.24

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.29  E-value=1.2  Score=30.42  Aligned_cols=44  Identities=9%  Similarity=0.108  Sum_probs=31.8

Q ss_pred             ccCccccCCCceEEEEEeecCCceEEEEeCCCc---------cceeeeeccccc
Q psy3031          69 WDSTFCAVNPKFLAIIVESAGGGAFIVLPLNKY---------HPALAVEWSLTF  113 (136)
Q Consensus        69 ~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~~---------~~vld~~~~p~~  113 (136)
                      .+..|+| |.+.||..++..++..+.+++++-.         +.+.+.+|+|.+
T Consensus       217 ~~p~~SP-DG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~~  269 (269)
T d2hqsa1         217 ETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL  269 (269)
T ss_dssp             EEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred             cceEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCCCC
Confidence            4457777 6788888888777777777777532         456778888853

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=85.24  E-value=0.79  Score=32.05  Aligned_cols=75  Identities=13%  Similarity=0.026  Sum_probs=45.5

Q ss_pred             CCCceeeCCcEEEEeeecCCCceEEEecCCCCcccCccccCCCceEEEEEeecCCceEEEEeCCC---------ccceee
Q psy3031          36 DSTFCAVNPKFLAIIVESAGGGAFIVLPLNKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPLNK---------YHPALA  106 (136)
Q Consensus        36 d~n~iaan~kfiAv~~~~~gGG~~~Vlpls~~g~D~~f~p~n~~~lAv~~e~~gGG~f~V~pl~~---------~~~vld  106 (136)
                      |++.+|.-++=-.+.|+. .+|...-++....-.+..|+| |.++|++++++. |..+.|..++.         .+.|..
T Consensus        14 dG~~~a~~~~g~v~v~d~-~~~~~~~~~~~~~v~~~~~sp-Dg~~l~~~~~~~-g~~v~v~d~~~~~~~~~~~~~~~v~~   90 (360)
T d1k32a3          14 DGDLIAFVSRGQAFIQDV-SGTYVLKVPEPLRIRYVRRGG-DTKVAFIHGTRE-GDFLGIYDYRTGKAEKFEENLGNVFA   90 (360)
T ss_dssp             GGGCEEEEETTEEEEECT-TSSBEEECSCCSCEEEEEECS-SSEEEEEEEETT-EEEEEEEETTTCCEEECCCCCCSEEE
T ss_pred             CCCEEEEEECCeEEEEEC-CCCcEEEccCCCCEEEEEECC-CCCEEEEEEcCC-CCEEEEEECCCCcEEEeeCCCceEEe
Confidence            555555433333345554 345544344444446788888 788999887753 34556666543         267889


Q ss_pred             eeccccc
Q psy3031         107 VEWSLTF  113 (136)
Q Consensus       107 ~~~~p~~  113 (136)
                      ++|+|.-
T Consensus        91 ~~~spdg   97 (360)
T d1k32a3          91 MGVDRNG   97 (360)
T ss_dssp             EEECTTS
T ss_pred             eeecccc
Confidence            9999854