Psyllid ID: psy303

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--
Protein Sequence
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHccccEEEEEcccccccccc
Coil and Loop (DISEMBL)
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVingffpdltlke
Flexible Loop (DISEMBL)
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKmlsnskvlvingffpdltlke
Low Complexity Region (SEG)
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE
Disordered region (IsUnstruct)
****ILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDL****
Disordered Region (DISOPRED)
******KDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDL****
Disordered Region (DISEMBL)
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE
Disordered Region (DISPRO)
*KKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	62	2.2.26 [Sep-21-2011]
Q24168	618	Origin recognition comple	yes	N/A	0.709	0.071	0.545	3e-09
Q75PQ8	576	Origin recognition comple	yes	N/A	0.774	0.083	0.469	4e-05
Q13416	577	Origin recognition comple	yes	N/A	0.774	0.083	0.448	0.0001
Q60862	576	Origin recognition comple	yes	N/A	0.774	0.083	0.428	0.0002
Q91628	558	Origin recognition comple	N/A	N/A	0.774	0.086	0.448	0.0003
A6QNM3	577	Origin recognition comple	yes	N/A	0.661	0.071	0.463	0.0004
Q38899	363	Origin recognition comple	yes	N/A	0.677	0.115	0.404	0.0004
Q09142	535	Origin recognition comple	yes	N/A	0.709	0.082	0.431	0.0009

>sp|Q24168|ORC2_DROME Origin recognition complex subunit 2 OS=Drosophila melanogaster GN=Orc2 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK++++  FH+++L    VLV+NGFFP LT+K+
Sbjct: 349 EGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKD 392

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
Drosophila melanogaster (taxid: 7227)

>sp|Q75PQ8|ORC2_RAT Origin recognition complex subunit 2 OS=Rattus norvegicus GN=Orc2 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 13  IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           I+QL +  FNI+L+G GSK  ++ +F   ML +S  +VINGFFP +++K
Sbjct: 300 ILQLRL-GFNIVLYGLGSKRDLLEKFRTTMLQDSIHVVINGFFPGISVK 347

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Rattus norvegicus (taxid: 10116)

>sp|Q13416|ORC2_HUMAN Origin recognition complex subunit 2 OS=Homo sapiens GN=ORC2 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 13  IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           ++QL +  FNI+L+G GSK  ++  F   ML +S  +VINGFFP +++K
Sbjct: 302 MLQLHL-GFNIVLYGLGSKRDLLERFRTTMLQDSIHVVINGFFPGISVK 349

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Homo sapiens (taxid: 9606)

>sp|Q60862|ORC2_MOUSE Origin recognition complex subunit 2 OS=Mus musculus GN=Orc2 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 13  IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           ++QL +  FNI+L+G GSK  ++ +F   ML +S  +VING+FP +++K
Sbjct: 301 MLQLHL-GFNIVLYGLGSKRDLLEKFRTTMLQDSIHVVINGYFPGVSVK 348

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Mus musculus (taxid: 10090)

>sp|Q91628|ORC2_XENLA Origin recognition complex subunit 2 OS=Xenopus laevis GN=orc2 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 13  IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           ++QL +  FNI+L G GSK  +I +F   +L +S  +VIN FFP +T K
Sbjct: 283 MLQLHL-GFNIILFGLGSKQSLIEKFRTSLLQDSLHIVINEFFPSITAK 330

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Xenopus laevis (taxid: 8355)

>sp|A6QNM3|ORC2_BOVIN Origin recognition complex subunit 2 OS=Bos taurus GN=ORC2 PE=2 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 21  FNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           FNI+L+G GSK  ++  F   ML +   +VINGFFP +++K
Sbjct: 310 FNIVLYGLGSKRDLLERFRTTMLQDCIHIVINGFFPGISVK 350

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Bos taurus (taxid: 9913)

>sp|Q38899|ORC2_ARATH Origin recognition complex subunit 2 OS=Arabidopsis thaliana GN=ORC2 PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 29/42 (69%)

Query: 21  FNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           F +L++GFGSK  ++ +F    L++  V+VING+ P + LK+
Sbjct: 83  FGLLMYGFGSKKALVEDFASASLTDYSVVVINGYLPSVNLKQ 124

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Arabidopsis thaliana (taxid: 3702)

>sp|Q09142|ORC2_SCHPO Origin recognition complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc2 PE=1 SV=1

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 18  IENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
           + NFN+L +GFGSK   ++ F +K L    + V+ G+FP L LK
Sbjct: 255 VNNFNLLFYGFGSKEHFLSSFVEKKLPCFPIFVVKGYFPQLQLK 298

Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. ORC binds to multiple sites within the ars1 origin of DNA replication in an ATP-independent manner.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	62
170040479	664	origin recognition complex subunit 2 [Cu	0.709	0.066	0.613	1e-08
195399556	622	GJ14342 [Drosophila virilis] gi|19414194	0.709	0.070	0.613	2e-08
195449583	638	GK22682 [Drosophila willistoni] gi|19416	0.709	0.068	0.590	2e-08
195113743	604	GI21981 [Drosophila mojavensis] gi|19391	0.709	0.072	0.590	6e-08
194746029	620	GF16229 [Drosophila ananassae] gi|190628	0.709	0.070	0.590	7e-08
195054014	571	GH22255 [Drosophila grimshawi] gi|193895	0.709	0.077	0.590	9e-08
24646727	618	origin recognition complex subunit 2 [Dr	0.709	0.071	0.545	1e-07
1136134	618	DmORC2 [Drosophila melanogaster]	0.709	0.071	0.545	1e-07
195571027	618	GD18940 [Drosophila simulans] gi|1941994	0.709	0.071	0.545	3e-07
195329118	618	GM24145 [Drosophila sechellia] gi|194120	0.709	0.071	0.545	3e-07

>gi|170040479|ref|XP_001848025.1| origin recognition complex subunit 2 [Culex quinquefasciatus] gi|167864109|gb|EDS27492.1| origin recognition complex subunit 2 [Culex quinquefasciatus]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK  ++  FH+K+L+N  VLVINGFFP LT+K+
Sbjct: 392 EGFNILLYGLGSKRNLLQTFHRKVLANQPVLVINGFFPTLTIKD 435

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399556|ref|XP_002058385.1| GJ14342 [Drosophila virilis] gi|194141945|gb|EDW58353.1| GJ14342 [Drosophila virilis]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+++LS   VLVINGFFP LTLK+
Sbjct: 353 EGFNILLYGLGSKRQLLQSFHREILSQQTVLVINGFFPSLTLKD 396

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195449583|ref|XP_002072135.1| GK22682 [Drosophila willistoni] gi|194168220|gb|EDW83121.1| GK22682 [Drosophila willistoni]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 36/44 (81%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNIL++G GSK +++  FH+++L+N  VLVINGFFP LTLK+
Sbjct: 369 EGFNILVYGLGSKRQLLQSFHREVLANQTVLVINGFFPSLTLKD 412

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195113743|ref|XP_002001427.1| GI21981 [Drosophila mojavensis] gi|193918021|gb|EDW16888.1| GI21981 [Drosophila mojavensis]

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+++L+   VLVINGFFP LTLK+
Sbjct: 335 EGFNILLYGLGSKRQLLQSFHREILAQQTVLVINGFFPSLTLKD 378

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194746029|ref|XP_001955487.1| GF16229 [Drosophila ananassae] gi|190628524|gb|EDV44048.1| GF16229 [Drosophila ananassae]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+++LS   VLV+NGFFP LTLK+
Sbjct: 351 EGFNILLYGLGSKRQLLQSFHQEVLSQQTVLVVNGFFPSLTLKD 394

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195054014|ref|XP_001993921.1| GH22255 [Drosophila grimshawi] gi|193895791|gb|EDV94657.1| GH22255 [Drosophila grimshawi]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 33/44 (75%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+ +L    VLVINGFFP LTLK+
Sbjct: 301 EGFNILLYGLGSKRQLLQSFHRDILGQQTVLVINGFFPSLTLKD 344

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24646727|ref|NP_731873.1| origin recognition complex subunit 2 [Drosophila melanogaster] gi|13124798|sp|Q24168.2|ORC2_DROME RecName: Full=Origin recognition complex subunit 2; Short=DmORC2 gi|7299828|gb|AAF55006.1| origin recognition complex subunit 2 [Drosophila melanogaster] gi|9802142|gb|AAF99606.1| ORC2 [Drosophila melanogaster] gi|15291253|gb|AAK92895.1| GH13824p [Drosophila melanogaster] gi|220945250|gb|ACL85168.1| Orc2-PA [synthetic construct] gi|220954984|gb|ACL90035.1| Orc2-PA [synthetic construct]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK++++  FH+++L    VLV+NGFFP LT+K+
Sbjct: 349 EGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKD 392

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|1136134|gb|AAC46955.1| DmORC2 [Drosophila melanogaster]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 35/44 (79%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK++++  FH+++L    VLV+NGFFP LT+K+
Sbjct: 349 EGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKD 392

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195571027|ref|XP_002103505.1| GD18940 [Drosophila simulans] gi|194199432|gb|EDX13008.1| GD18940 [Drosophila simulans]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 34/44 (77%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+++L    VLV+NGFFP LT+K+
Sbjct: 349 EGFNILLYGLGSKRQLLQSFHREVLQKQTVLVVNGFFPSLTIKD 392

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195329118|ref|XP_002031258.1| GM24145 [Drosophila sechellia] gi|194120201|gb|EDW42244.1| GM24145 [Drosophila sechellia]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 34/44 (77%)

Query: 19  ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
           E FNILL+G GSK +++  FH+++L    VLV+NGFFP LT+K+
Sbjct: 349 EGFNILLYGLGSKRQLLQSFHREVLQKQTVLVVNGFFPSLTIKD 392

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	62
FB|FBgn0015270	618	Orc2 "Origin recognition compl	0.709	0.071	0.545	8.4e-09
ZFIN|ZDB-GENE-061013-682	553	zgc:153041 "zgc:153041" [Danio	0.870	0.097	0.454	3.8e-07
UNIPROTKB|F1NDM4	569	ORC2 "Uncharacterized protein"	0.774	0.084	0.428	6e-06
RGD|1311844	576	Orc2 "origin recognition compl	0.774	0.083	0.469	9.9e-06
UNIPROTKB|Q13416	577	ORC2 "Origin recognition compl	0.774	0.083	0.448	2.7e-05
UNIPROTKB|Q9XFD6	379	OsORC2 "Origin recognition com	0.983	0.160	0.306	3.9e-05
MGI|MGI:1328306	576	Orc2 "origin recognition compl	0.774	0.083	0.428	5.6e-05
UNIPROTKB|A6QNM3	577	ORC2 "Origin recognition compl	0.774	0.083	0.428	7.2e-05
UNIPROTKB|F1N230	577	ORC2 "Origin recognition compl	0.774	0.083	0.428	7.2e-05
UNIPROTKB|E2RSR0	577	ORC2 "Uncharacterized protein"	0.774	0.083	0.428	7.2e-05

FB|FBgn0015270 Orc2 "Origin recognition complex subunit 2" [Drosophila melanogaster (taxid:7227)]

 Score = 142 (55.0 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 24/44 (54%), Positives = 35/44 (79%)

Query:    19 ENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
             E FNILL+G GSK++++  FH+++L    VLV+NGFFP LT+K+
Sbjct:   349 EGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKD 392

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS;NAS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006261 "DNA-dependent DNA replication" evidence=ISS;NAS

GO:0000792 "heterochromatin" evidence=IDA

GO:0005723 "alpha-heterochromatin" evidence=IDA

GO:0006260 "DNA replication" evidence=ISS;IMP;TAS

GO:0006270 "DNA replication initiation" evidence=IMP;IDA

GO:0003677 "DNA binding" evidence=NAS

GO:0006342 "chromatin silencing" evidence=NAS

GO:0007307 "eggshell chorion gene amplification" evidence=IMP;TAS

GO:0007052 "mitotic spindle organization" evidence=IMP

GO:0007076 "mitotic chromosome condensation" evidence=IMP

GO:0030261 "chromosome condensation" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0003682 "chromatin binding" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-061013-682 zgc:153041 "zgc:153041" [Danio rerio (taxid:7955)]

 Score = 126 (49.4 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 25/55 (45%), Positives = 38/55 (69%)

Query:     7 KDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             K+ +  ++QL +  FNILL+G GSK  ++ +F   MLS+   +V+NGFFP +TLK
Sbjct:   273 KNFRQWMLQLRM-GFNILLYGLGSKQLLLEKFRSSMLSDYDHVVVNGFFPSITLK 326

GO:0005634 "nucleus" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0000808 "origin recognition complex" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1NDM4 ORC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 115 (45.5 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 21/49 (42%), Positives = 35/49 (71%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK+ ++ +F   ML +   LV+NG+FP +T+K
Sbjct:   294 MLQLHL-GFNIVLYGLGSKHDLLEKFRTSMLQDCVHLVVNGYFPSITVK 341

GO:0006260 "DNA replication" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

RGD|1311844 Orc2 "origin recognition complex, subunit 2" [Rattus norvegicus (taxid:10116)]

 Score = 113 (44.8 bits), Expect = 9.9e-06, P = 9.9e-06
 Identities = 23/49 (46%), Positives = 35/49 (71%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             I+QL +  FNI+L+G GSK  ++ +F   ML +S  +VINGFFP +++K
Sbjct:   300 ILQLRL-GFNIVLYGLGSKRDLLEKFRTTMLQDSIHVVINGFFPGISVK 347

GO:0000785 "chromatin" evidence=ISO

GO:0000792 "heterochromatin" evidence=IEA;ISO

GO:0000808 "origin recognition complex" evidence=IEA;ISO

GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA;ISO

GO:0003688 "DNA replication origin binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA;ISO

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|Q13416 ORC2 "Origin recognition complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 22/49 (44%), Positives = 34/49 (69%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK  ++  F   ML +S  +VINGFFP +++K
Sbjct:   302 MLQLHL-GFNIVLYGLGSKRDLLERFRTTMLQDSIHVVINGFFPGISVK 349

GO:0000792 "heterochromatin" evidence=IEA

GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005664 "nuclear origin of replication recognition complex" evidence=IDA

GO:0000808 "origin recognition complex" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0005634 "nucleus" evidence=TAS

GO:0006270 "DNA replication initiation" evidence=TAS

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000216 "M/G1 transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006260 "DNA replication" evidence=TAS

UNIPROTKB|Q9XFD6 OsORC2 "Origin recognition complex subunit 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 105 (42.0 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 19/62 (30%), Positives = 38/62 (61%)

Query:     1 MKKTILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTL 60
             + ++  +  +N + +L    F +L++GFGSK  ++ +F    LS+  V+V+NG+ P + L
Sbjct:    81 LTRSYKEQYRNWLFELRC-GFGLLMYGFGSKKMLLEDFASTTLSDFTVIVVNGYLPSINL 139

Query:    61 KE 62
             K+
Sbjct:   140 KQ 141

GO:0003688 "DNA replication origin binding" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0005656 "pre-replicative complex" evidence=ISS

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

GO:0006267 "pre-replicative complex assembly" evidence=ISS

GO:0006270 "DNA replication initiation" evidence=ISS

GO:0030466 "chromatin silencing at silent mating-type cassette" evidence=ISS

MGI|MGI:1328306 Orc2 "origin recognition complex, subunit 2" [Mus musculus (taxid:10090)]

 Score = 106 (42.4 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 21/49 (42%), Positives = 35/49 (71%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK  ++ +F   ML +S  +VING+FP +++K
Sbjct:   301 MLQLHL-GFNIVLYGLGSKRDLLEKFRTTMLQDSIHVVINGYFPGVSVK 348

GO:0000785 "chromatin" evidence=IDA

GO:0000792 "heterochromatin" evidence=IDA

GO:0000808 "origin recognition complex" evidence=ISO

GO:0000939 "condensed chromosome inner kinetochore" evidence=IDA

GO:0003688 "DNA replication origin binding" evidence=IDA

GO:0005634 "nucleus" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISO;IDA

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|A6QNM3 ORC2 "Origin recognition complex subunit 2" [Bos taurus (taxid:9913)]

 Score = 105 (42.0 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 21/49 (42%), Positives = 33/49 (67%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK  ++  F   ML +   +VINGFFP +++K
Sbjct:   303 MLQLHL-GFNIVLYGLGSKRDLLERFRTTMLQDCIHIVINGFFPGISVK 350

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|F1N230 ORC2 "Origin recognition complex subunit 2" [Bos taurus (taxid:9913)]

 Score = 105 (42.0 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 21/49 (42%), Positives = 33/49 (67%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK  ++  F   ML +   +VINGFFP +++K
Sbjct:   303 MLQLHL-GFNIVLYGLGSKRDLLERFRTTMLQDCIHIVINGFFPGISVK 350

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA

GO:0000792 "heterochromatin" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|E2RSR0 ORC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 105 (42.0 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 21/49 (42%), Positives = 34/49 (69%)

Query:    13 IIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLK 61
             ++QL +  FNI+L+G GSK  ++  F   +L +S  +VINGFFP +++K
Sbjct:   302 MLQLRL-GFNIVLYGLGSKRDLLERFRTTVLQDSIHVVINGFFPGISVK 349

GO:0006260 "DNA replication" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000808 "origin recognition complex" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q24168	ORC2_DROME	No assigned EC number	0.5454	0.7096	0.0711	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	62
pfam04084	318	pfam04084, ORC2, Origin recognition complex subuni	7e-11
COG5575	535	COG5575, ORC2, Origin recognition complex, subunit	1e-05

>gnl|CDD|217882 pfam04084, ORC2, Origin recognition complex subunit 2

 Score = 54.6 bits (132), Expect = 7e-11
 Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 19 ENFNILLHGFGSKYKVINEFHKKMLS-NSKVLVINGFFPDLTLKE 62
          + FN+L +G GSK  ++ +F K+ LS    V+V+NGFFP L +K+
Sbjct: 53 QGFNLLFYGLGSKRNLLEDFAKEYLSDKGPVVVVNGFFPSLNIKD 97

All DNA replication initiation is driven by a single conserved eukaryotic initiator complex termed he origin recognition complex (ORC). The ORC is a six protein complex. The function of ORC is reviewed in. Length = 318

>gnl|CDD|227862 COG5575, ORC2, Origin recognition complex, subunit 2 [DNA replication, recombination, and repair]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 18  IENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE 62
             +FN+L +G+GSK   + +F    L    +  +NG+ P ++ +E
Sbjct: 254 ARSFNLLFYGYGSKTAFLRKFFPSALPCFPIFYLNGYCPIMSRRE 298

Length = 535

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	62
PF04084	326	ORC2: Origin recognition complex subunit 2 ; Inter	99.95
KOG2928|consensus	518		99.89
COG5575	535	ORC2 Origin recognition complex, subunit 2 [DNA re	99.81
PF14453	57	ThiS-like: ThiS-like ubiquitin	85.79

>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []

Probab=99.95  E-value=2.6e-28  Score=176.85  Aligned_cols=59  Identities=36%  Similarity=0.700  Sum_probs=56.6

Q ss_pred             hhhhhhhHHHHHHHHhCcceEEEeecchHHHHHHHHHHhhcC---CcEEEEeccCCCCcccC
Q psy303            4 TILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSN---SKVLVINGFFPDLTLKE   62 (62)
Q Consensus         4 ~~~~~~f~qW~~eL~~gFnlllYG~GSKr~lL~~Fa~~~l~~---~~~lvVnGy~p~~tikd   62 (62)
                      ..+++.||||++||.+||||||||+||||+||++||++++.+   +++||||||+|++|+||
T Consensus        38 ~~~~~~F~qW~~eL~~GFnlL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~   99 (326)
T PF04084_consen   38 ELHRKLFPQWMFELSQGFNLLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKD   99 (326)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHH
Confidence            567889999999999999999999999999999999999999   89999999999999985

ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus

>KOG2928|consensus

Probab=99.89  E-value=1.4e-23  Score=160.72  Aligned_cols=58  Identities=38%  Similarity=0.579  Sum_probs=55.6

Q ss_pred             hhhhhhHHHHHHHHhCcceEEEeecchHHHHHHHHHHhhcCCcEEEEeccCCCCcccC
Q psy303            5 ILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE   62 (62)
Q Consensus         5 ~~~~~f~qW~~eL~~gFnlllYG~GSKr~lL~~Fa~~~l~~~~~lvVnGy~p~~tikd   62 (62)
                      .++..|+||+++|.+||||||||+||||.||++|+..++.+.+++|||||+|++++|+
T Consensus       234 ~~~~~f~Kw~~~L~~gFNiLfYG~GSKr~lLe~F~~~~L~~~~~~ving~~p~ln~K~  291 (518)
T KOG2928|consen  234 DYKKMFPKWMFELARGFNILFYGVGSKRALLEEFAPEALYDYTVLVINGYFPSLNVKD  291 (518)
T ss_pred             HHHHhhHHHHHHHhccccEEEEecCcHHHHHHHHHHHhcccceEEEEeccCccchHHH
Confidence            4678899999999999999999999999999999999999999999999999999885

>COG5575 ORC2 Origin recognition complex, subunit 2 [DNA replication, recombination, and repair]

Probab=99.81  E-value=1.1e-20  Score=144.07  Aligned_cols=58  Identities=22%  Similarity=0.391  Sum_probs=55.5

Q ss_pred             hhhhhhHHHHHHHHhCcceEEEeecchHHHHHHHHHHhhcCCcEEEEeccCCCCcccC
Q psy303            5 ILKDIQNGIIQLEIENFNILLHGFGSKYKVINEFHKKMLSNSKVLVINGFFPDLTLKE   62 (62)
Q Consensus         5 ~~~~~f~qW~~eL~~gFnlllYG~GSKr~lL~~Fa~~~l~~~~~lvVnGy~p~~tikd   62 (62)
                      ++++.||||+|||.+||||||||+|||+.+|++|+..++...||+++|||+|.++.||
T Consensus       241 ~q~k~F~q~~feL~~~FnLLFYG~GSK~~fL~~f~~~~LP~~P~~~lnGY~p~~~~r~  298 (535)
T COG5575         241 LQCKNFHQELFELARSFNLLFYGYGSKTAFLRKFFPSALPCFPIFYLNGYCPIMSRRE  298 (535)
T ss_pred             eeccccHHHHHHHhhhceEEEEecCchHHHHHHHhHHhcCCcceeeecccCccccHHH
Confidence            5788999999999999999999999999999999999999999999999999999875

>PF14453 ThiS-like: ThiS-like ubiquitin

Probab=85.79  E-value=0.96  Score=26.20  Aligned_cols=23  Identities=22%  Similarity=0.523  Sum_probs=18.4

Q ss_pred             HHHHHHHhhcCCcEEEEeccCCC
Q psy303           35 INEFHKKMLSNSKVLVINGFFPD   57 (62)
Q Consensus        35 L~~Fa~~~l~~~~~lvVnGy~p~   57 (62)
                      |.++++..-.+..++|+|||...
T Consensus        18 l~~lr~~~k~~~DI~I~NGF~~~   40 (57)
T PF14453_consen   18 LFELRKESKPDADIVILNGFPTK   40 (57)
T ss_pred             HHHHHHhhCCCCCEEEEcCcccC
Confidence            56777777778889999999753

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00