Psyllid ID: psy3043

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-

MGSKHFVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYPGSISRPPPHHNNEYRQCFIASHQMGEKRHNTSHLGSGPAQEHQKVSRRNIFNRKTSTNILSMVGIEDGTSRMASKRVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRKETYKKERRSPGKQEGVGSNPAKAWNFILIYLRIQPHNNRASRVRWYRTPTALTLPSGCLPLKSLLLLFTRRPSLA

ccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcEEHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHEEEEEEEEEcccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccccccccccHHEEEEEEEEcccccccccEEEEEcccccccccccccHHHHHHHHccccccc

ccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHEEEEccccccHHccccccHHHHHHHHHHHHHHHHccHHHHEHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccHHHHHHEEHcccccccccccccccccHHHHHHHHHHHHHccccccHHHHEEEcccccccccccccccccccccEEEEccHHHHHHHHHHHHHHHHcccEEEEEEEEHccccccccccccccEcccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccHHHHHHHHccccccc

mgskhfvqllpldqsqqYISFLLIVSGLLLRWLtslhpysgqgkppmfgdyeAQRHWMEITRhlpvstwyqnttdndllywgldyppltayHSLLCGYVaeyfvpdgvklftshghesyqhKYFMRLCVLVSDVLIYIPALLCFfsrtensssqrvSQTFVLSVALIypglilidhghfqFNCISLGLFIWAchhlhlnnpvCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAilpscvsvfrkpnvvkfqQSLIVVSLGFFLFSFHVHEKSILLVStpvilylprdpfpcvWFLFISTFSMFdlyikdnlvlpslTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIAlgvapppryQHLFSLFIATYSFeqslsklsphFLISFVILgsgsqpffarvplgypgsisrppphhnneyrQCFIAshqmgekrhntshlgsgpaqehqkvsrrnifnrktstNILSMVGiedgtsrmaskrvttgltvppffyfkgeEVVSTVFQFLSTVLTMPLHIVIYLVLQdvvddsdgcggndvvdgcggKFTVLIVSDKFEGKGILQRHRKETykkerrspgkqegvgsnpaKAWNFILIYLRiqphnnrasrvrwyrtptaltlpsgclplkSLLLLFTRRPSLA

MGSKHFVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYPGSISRPPPHHNNEYRQCFIASHQMGEKRHNtshlgsgpaqehqkvsrrnifnrktstnilsmvgiedgtsrmaskrvttgLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIvsdkfegkgilqrhrketykkerrspgkqegvgsnpaKAWNFILIYLRIQPHNNRASRVRWYRTPTAltlpsgclplksllllftrrpsla

MGSKHFVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYPGSISRPPPHHNNEYRQCFIASHQMGEKRHNTSHLGSGPAQEHQKVSRRNIFNRKTSTNILSMVGIEDGTSRMASKRVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQdvvddsdgcggndvvdgcggKFTVLIVSDKFEGKGILQRHRKETYKKERRSPGKQEGVGSNPAKAWNFILIYLRIQPHNNRASRVRWYRTPTALTlpsgclplksllllFTRRPSLA

*****FVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRT******RVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYP***************QCFI**************************************NILSMVGIED*****ASKRVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGIL**************************KAWNFILIYLRIQPHNNRASRVRWYRTPTALTLPSGCLPLKSLLLLFT******

*************QSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVP*************************************************************************************TVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGI***************************KAWNFILIYLRIQPHNNRASRVRWYRTPTALTLPSGCLPLKSLLLLFTRRP***

MGSKHFVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRT*********QTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYPGSISRPPPHHNNEYRQCFIASHQM**********************RRNIFNRKTSTNILSMVGIEDGTSRMASKRVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRH********************NPAKAWNFILIYLRIQPHNNRASRVRWYRTPTALTLPSGCLPLKSLLLLFTRRPSLA

*****FVQLLPLDQSQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIRLLLTLGSSVLITFILVWLPFLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVILGSGSQPFFARVPLGYPGSISRPPPHHNNEYRQCFIASHQ*************************N**NRKTSTNILSMVGIED***********TGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRKETYKKERR********GSNPAKAWNFILIYLRIQPHNNRASRVRWYRTPTALTLPSGCLPLKSLLLLFTRR****

iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		731	2.2.26 [Sep-21-2011]
Q9Y672		507	Dolichyl pyrophosphate Ma	yes	N/A	0.606	0.873	0.452	1e-107
Q5NVS8		507	Dolichyl pyrophosphate Ma	yes	N/A	0.606	0.873	0.45	1e-106
Q3TAE8		507	Dolichyl pyrophosphate Ma	yes	N/A	0.596	0.859	0.450	1e-104
Q3T1L5		507	Dolichyl pyrophosphate Ma	yes	N/A	0.596	0.859	0.446	1e-103
Q802T2		507	Dolichyl pyrophosphate Ma	yes	N/A	0.593	0.856	0.445	5e-98
Q9VKX7		475	Probable dolichyl pyropho	yes	N/A	0.592	0.911	0.434	5e-95
Q54QG6		518	Probable dolichyl pyropho	yes	N/A	0.538	0.760	0.480	1e-93
Q09226		503	Probable dolichyl pyropho	yes	N/A	0.564	0.821	0.419	1e-83
Q9FF17		533	Probable dolichyl pyropho	yes	N/A	0.597	0.819	0.415	5e-82
O43053		506	Probable dolichyl pyropho	yes	N/A	0.595	0.859	0.405	3e-77

>sp\|Q9Y672\|ALG6_HUMAN Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Homo sapiens GN=ALG6 PE=1 SV=1	Back alignment and function desciption

 Score =  390 bits (1001), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/480 (45%), Positives = 298/480 (62%), Gaps = 37/480 (7%)

Query: 15  SQQYISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTT 74
            + Y+  ++++ GL +RW  SL+ YSG GKPPMFGDYEAQRHW EIT +LPV  WY N++
Sbjct: 2   EKWYLMTVVVLIGLTVRWTVSLNSYSGAGKPPMFGDYEAQRHWQEITFNLPVKQWYFNSS 61

Query: 75  DNDLLYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDV 134
           DN+L YWGLDYPPLTAYHSLLC YVA++  PD + L TS G+ES  HK FMR  VL++D+
Sbjct: 62  DNNLQYWGLDYPPLTAYHSLLCAYVAKFINPDWIALHTSRGYESQAHKLFMRTTVLIADL 121

Query: 135 LIYIPALLCF-FSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWAC 193
           LIYIPA++ +     E S+ ++++    +   L+YPGLILID+GHFQ+N +SLG  +W  
Sbjct: 122 LIYIPAVVLYCCCLKEISTKKKIANALCI---LLYPGLILIDYGHFQYNSVSLGFALWGV 178

Query: 194 HHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHT----TDIRLLLTLGSSV 249
             +  +  +  ++ F L++NYKQMELYHALPFF + LG  +          LL+ L   V
Sbjct: 179 LGISCDCDLLGSLAFCLAINYKQMELYHALPFFCFLLGKCFKKGLKGKGFVLLVKLACIV 238

Query: 250 LITFILVWLPFLSV-SQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMA 308
           + +F+L WLPF +   Q   V+ RLFP+ RGLFEDKVAN WCS NV  K    +      
Sbjct: 239 VASFVLCWLPFFTEREQTLQVLRRLFPVDRGLFEDKVANIWCSFNVFLKIKDILPRHIQL 298

Query: 309 LMCLCTTLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILY 368
           +M  C T L++LP+C+ +  +P+   F+ +L+  +L FFLFSF VHEKSILLVS PV L 
Sbjct: 299 IMSFCFTFLSLLPACIKLILQPSSKGFKFTLVSCALSFFLFSFQVHEKSILLVSLPVCLV 358

Query: 369 LPRDPFPCVWFLFISTFSMFDLYIKDNLVLPS-LTLMALYYTIIHDFA------------ 415
           L   PF   WFL +STFSM  L +KD L++PS +T MA +   +  F+            
Sbjct: 359 LSEIPFMSTWFLLVSTFSMLPLLLKDELLMPSVVTTMAFFIACVTSFSIFEKTSEEELQL 418

Query: 416 -------RK--------SRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYS 460
                  RK        SR++ Y+FL S++  VLL  + + + PP +   LFS+ +   S
Sbjct: 419 KSFSISVRKYLPCFTFLSRIIQYLFLISVITMVLLTLMTVTLDPPQKLPDLFSVLVCFVS 478

Adds the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 6EC: 7

>sp\|Q5NVS8\|ALG6_PONAB Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Pongo abelii GN=ALG6 PE=2 SV=1	Back alignment and function description

>sp\|Q3TAE8\|ALG6_MOUSE Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Mus musculus GN=Alg6 PE=2 SV=1	Back alignment and function description

>sp\|Q3T1L5\|ALG6_RAT Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Rattus norvegicus GN=Alg6 PE=2 SV=1	Back alignment and function description

>sp\|Q802T2\|ALG6_CHICK Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Gallus gallus GN=ALG6 PE=2 SV=1	Back alignment and function description

>sp\|Q9VKX7\|ALG6_DROME Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Drosophila melanogaster GN=CG5091 PE=2 SV=2	Back alignment and function description

>sp\|Q54QG6\|ALG6_DICDI Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Dictyostelium discoideum GN=alg6 PE=3 SV=1	Back alignment and function description

>sp\|Q09226\|ALG6_CAEEL Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Caenorhabditis elegans GN=C08B11.8 PE=3 SV=1	Back alignment and function description

>sp\|Q9FF17\|ALG6_ARATH Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Arabidopsis thaliana GN=At5g38460 PE=2 SV=1	Back alignment and function description

>sp\|O43053\|ALG6_SCHPO Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg6 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		731
390332462		526	PREDICTED: dolichyl pyrophosphate Man9Gl	0.603	0.838	0.483	1e-117
332025561		533	Putative dolichyl pyrophosphate Man9GlcN	0.608	0.834	0.470	1e-113
307204868		532	Dolichyl pyrophosphate Man9GlcNAc2 alpha	0.612	0.842	0.463	1e-110
156388210		488	predicted protein [Nematostella vectensi	0.601	0.901	0.492	1e-109
322799796		882	hypothetical protein SINV_11992 [Solenop	0.515	0.427	0.532	1e-109
410921960		504	PREDICTED: dolichyl pyrophosphate Man9Gl	0.593	0.861	0.475	1e-107
38026892		507	dolichyl pyrophosphate Man9GlcNAc2 alpha	0.606	0.873	0.452	1e-106
350586145		507	PREDICTED: dolichyl pyrophosphate Man9Gl	0.607	0.875	0.444	1e-106
410215338		507	asparagine-linked glycosylation 6, alpha	0.606	0.873	0.452	1e-105
21263380		507	RecName: Full=Dolichyl pyrophosphate Man	0.606	0.873	0.452	1e-105

>gi\|390332462\|ref\|XP_796240.3\| PREDICTED: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like [Strongylocentrotus purpuratus]	Back alignment and taxonomy information

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/459 (48%), Positives = 296/459 (64%), Gaps = 18/459 (3%)

Query: 19  ISFLLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDL 78
           ++FL++V+ + +RW  SL+PYSG GKPPMFGDYEAQRHWME+T HLPV  WY NT+ NDL
Sbjct: 7   LTFLIVVAAVSIRWCVSLNPYSGAGKPPMFGDYEAQRHWMEMTYHLPVEEWYHNTSANDL 66

Query: 79  LYWGLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYI 138
            YWGLDYPPLTAYHS LCGYVA+   PD V L  S GHES  HK FMR  VLV+D+L+YI
Sbjct: 67  QYWGLDYPPLTAYHSWLCGYVADKVNPDWVALQRSRGHESEGHKLFMRYTVLVADLLVYI 126

Query: 139 PALLCFFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHL 198
           PA++ FF  T    S      F  +V L+YPGL+LID+GHFQ+NCISLG  +WA   +  
Sbjct: 127 PAVIAFFFWTVKDRSNIQLLAFA-AVTLLYPGLVLIDYGHFQYNCISLGFTLWAVVAMAT 185

Query: 199 NNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTD-IRL--LLTLGSSVLITFIL 255
           N+ +  ++ F L++NYKQMELYHA+PFF Y LG    + D IRL  L  +G  V+ TF L
Sbjct: 186 NHELLGSLAFVLALNYKQMELYHAVPFFCYLLGRCLWSKDEIRLWKLAKIGVFVIATFAL 245

Query: 256 VWLPFL-SVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCT 314
            WLPFL  +  +  V++R+FP  RGLFEDKV+N WCS NV+ K    ++   +  + L +
Sbjct: 246 CWLPFLHDIKHILQVIHRIFPFARGLFEDKVSNIWCSLNVIIKLKNLLSQPLLIRLSLAS 305

Query: 315 TLLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPF 374
           TL+ + PS V++   P++ K + +L+  SL FFLFS+ VHEKSIL+ + PV L L   P 
Sbjct: 306 TLICLAPSAVNLLLNPSIQKLKYALVNSSLVFFLFSYQVHEKSILIAALPVCLLLHEQPV 365

Query: 375 PCVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYT-------------IIHDFARKSRLV 421
            C WFL IS FSM  L IKD L+L ++ LM L+YT                   + + + 
Sbjct: 366 LCTWFLLISVFSMLPLLIKDRLILATVPLMVLFYTGSKVSQSSWVTPPTSDQRGQSASIR 425

Query: 422 YYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYS 460
            + F  S+LG + L   +L + PP R+  L+ + ++ YS
Sbjct: 426 NFAFWCSILGVIALTACSLVIQPPQRFPDLWPVLVSIYS 464

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi\|332025561\|gb\|EGI65724.1\| Putative dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|307204868\|gb\|EFN83426.1\| Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Harpegnathos saltator]	Back alignment and taxonomy information

>gi\|156388210\|ref\|XP_001634594.1\| predicted protein [Nematostella vectensis] gi\|156221679\|gb\|EDO42531.1\| predicted protein [Nematostella vectensis]	Back alignment and taxonomy information

>gi\|322799796\|gb\|EFZ20993.1\| hypothetical protein SINV_11992 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|410921960\|ref\|XP_003974451.1\| PREDICTED: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like [Takifugu rubripes]	Back alignment and taxonomy information

>gi\|38026892\|ref\|NP_037471.2\| dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase precursor [Homo sapiens]	Back alignment and taxonomy information

>gi\|350586145\|ref\|XP_003127995.3\| PREDICTED: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Sus scrofa]	Back alignment and taxonomy information

>gi|410215338|gb|JAA04888.1| asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog [Pan troglodytes] gi|410246924|gb|JAA11429.1| asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog [Pan troglodytes] gi|410302448|gb|JAA29824.1| asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog [Pan troglodytes] gi|410328919|gb|JAA33406.1| asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog [Pan troglodytes]

Back alignment and taxonomy information

>gi|21263380|sp|Q9Y672.1|ALG6_HUMAN RecName: Full=Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase; AltName: Full=Asparagine-linked glycosylation protein 6 homolog; AltName: Full=Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase; AltName: Full=Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase gi|5281124|gb|AAD41466.1|AF102851_1 dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase [Homo sapiens] gi|12654821|gb|AAH01253.1| Asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) [Homo sapiens] gi|119626976|gb|EAX06571.1| asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3-glucosyltransferase), isoform CRA_a [Homo sapiens] gi|193785669|dbj|BAG51104.1| unnamed protein product [Homo sapiens]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		731
MGI\|MGI:2444031		507	Alg6 "asparagine-linked glycos	0.521	0.751	0.511	1.3e-105
UNIPROTKB\|Q9Y672		507	ALG6 "Dolichyl pyrophosphate M	0.540	0.779	0.493	3.2e-104
UNIPROTKB\|A2A2G4		509	ALG6 "Dolichyl pyrophosphate M	0.540	0.776	0.491	2.3e-103
UNIPROTKB\|F1S811		507	ALG6 "Uncharacterized protein"	0.540	0.779	0.488	1.3e-102
UNIPROTKB\|Q802T2		507	ALG6 "Dolichyl pyrophosphate M	0.534	0.771	0.493	1.6e-102
RGD\|1308815		507	Alg6 "ALG6, alpha-1,3-glucosyl	0.519	0.749	0.507	2e-102
UNIPROTKB\|Q3T1L5		507	Alg6 "Dolichyl pyrophosphate M	0.519	0.749	0.507	2e-102
ZFIN\|ZDB-GENE-040808-45		507	alg6 "asparagine-linked glycos	0.529	0.763	0.51	3.3e-102
UNIPROTKB\|F6QF86		507	ALG6 "Uncharacterized protein"	0.541	0.781	0.485	4.2e-102
UNIPROTKB\|F1NED3		507	ALG6 "Dolichyl pyrophosphate M	0.534	0.771	0.491	6.9e-102

MGI\|MGI:2444031 Alg6 "asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

 Score = 1028 (366.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
 Identities = 200/391 (51%), Positives = 266/391 (68%)

Query:    22 LLIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYW 81
             ++++ GL +RW  SL  YSG GKPPMFGDYEAQRHW EIT +LPV  WY N++DN+LLYW
Sbjct:     9 VVVLLGLTVRWTVSLSSYSGAGKPPMFGDYEAQRHWQEITLNLPVKQWYFNSSDNNLLYW 68

Query:    82 GLDYPPLTAYHSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPAL 141
             GLDYPPLTAYHSLLC YVA++  PD V L TS G+ES  HK FMR  VL +D+LIY+PA+
Sbjct:    69 GLDYPPLTAYHSLLCAYVAKFINPDWVALHTSRGYESQAHKLFMRATVLAADLLIYVPAV 128

Query:   142 LCF-FSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNN 200
             L + +S  E S  ++++    +   L+YPGLILID+GHFQ+N +SLG  +W    +  + 
Sbjct:   129 LLYCYSLKEISPKRKIASALCI---LLYPGLILIDYGHFQYNSVSLGFALWGVLGVSWDW 185

Query:   201 PVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHT----TDIRLLLTLGSSVLITFILV 256
              +  ++ F L++NYKQMELYH+LPFF + LG  +        + L + +  +VL +F+L 
Sbjct:   186 DLLGSLAFCLALNYKQMELYHSLPFFCFLLGKCFKKGLKGKGLALFIRIACTVLASFLLC 245

Query:   257 WLPFLSVSQLG-HVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTT 315
             WLPFL+  +    V+ RLFP+ RGLFEDKVAN WCS NV  K    +       +  C T
Sbjct:   246 WLPFLTEREHALQVVRRLFPVDRGLFEDKVANIWCSVNVFLKIKDTLPRHIQIAISFCFT 305

Query:   316 LLAILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFP 375
             LL++LP+C+ +  +P+   F+ +L+  +L FFLFSF VHEKSILLVS PV L L   PF 
Sbjct:   306 LLSLLPACIKLTVRPSCKGFRFTLVSCALSFFLFSFQVHEKSILLVSLPVCLVLTEIPFM 365

Query:   376 CVWFLFISTFSMFDLYIKDNLVLPSL-TLMA 405
               WFL +STFSM  L +KD L+LPS+ T+MA
Sbjct:   366 STWFLLVSTFSMLPLLLKDELLLPSVVTVMA 396

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0046527 "glucosyltransferase activity" evidence=ISO

UNIPROTKB\|Q9Y672 ALG6 "Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|A2A2G4 ALG6 "Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1S811 ALG6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q802T2 ALG6 "Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

RGD\|1308815 Alg6 "ALG6, alpha-1,3-glucosyltransferase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3T1L5 Alg6 "Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040808-45 alg6 "asparagine-linked glycosylation 6 homolog (S. cerevisiae, alpha-1,3-glucosyltransferase)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F6QF86 ALG6 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NED3 ALG6 "Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5NVS8	ALG6_PONAB	2, ., 4, ., 1, ., 2, 6, 7	0.45	0.6060	0.8737	yes	N/A
Q9Y672	ALG6_HUMAN	2, ., 4, ., 1, ., 2, 6, 7	0.4520	0.6060	0.8737	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		731
pfam03155		463	pfam03155, Alg6_Alg8, ALG6, ALG8 glycosyltransfera	1e-133
pfam01722		72	pfam01722, BolA, BolA-like protein	3e-06
COG0271		90	COG0271, BolA, Stress-induced morphogen (activity	5e-05

>gnl\|CDD\|217394 pfam03155, Alg6_Alg8, ALG6, ALG8 glycosyltransferase family	Back alignment and domain information

 Score =  400 bits (1031), Expect = e-133
 Identities = 199/457 (43%), Positives = 272/457 (59%), Gaps = 26/457 (5%)

Query: 25  VSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLD 84
           +S L L+ L SL PYSG G PPM+GD+EAQRHW+EIT +LP+S WY N+T N    WGLD
Sbjct: 1   ISLLFLKLLISLIPYSGSGSPPMYGDFEAQRHWLEITHNLPISQWYYNSTSN----WGLD 56

Query: 85  YPPLTAYHSLLCGYVAEYFV-PDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLC 143
           YPPLTAYHS L G +A++F+ P+ + L TS G+ES   K FMRL V++SD+L Y+PAL  
Sbjct: 57  YPPLTAYHSYLLGQIAKFFIDPEWLALVTSRGYESLATKLFMRLTVIISDLLFYLPALRF 116

Query: 144 FFSRTENSSSQRVSQTFVLSVALIYPGLILIDHGHFQFNCISLGLFIWACHHLHLNNPVC 203
           +    +  S +   +  + S+ L+YPGL+LIDHGHFQ+N + LGL +++   L  N  + 
Sbjct: 117 YCKSLKRMSPKD--KFILASLILLYPGLLLIDHGHFQYNGVLLGLLLYSIAALLKNRYLL 174

Query: 204 TAILFSLSVNYKQMELYHALPFFFYYLGHVYHTTDIR----LLLTLGSSVLITFILVWLP 259
            A LF L++N+KQMELYHA PFF Y L    +  + R     +L L   V+ TF +++LP
Sbjct: 175 AAFLFVLALNFKQMELYHAPPFFVYLLRRCLNKKNFRNSFARILKLALVVVGTFAIIFLP 234

Query: 260 FLSVSQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMAL-MCLCTTLLA 318
           FL + QL  V+ RLFP  RGLFEDKVANFWC  N V K    +   Q+   +    TL+ 
Sbjct: 235 FLYLKQLPQVLSRLFPFARGLFEDKVANFWCLYNFVDKIKEVVPLPQIQPYISFILTLIG 294

Query: 319 ILPSCVSVFRKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYL---PRDPFP 375
            LP+ V +F +P    F  +L +  L FFLFSFHVHEK+ILLV  P  L L    RD   
Sbjct: 295 SLPALVKLFLRPTKKGFLLALTLCGLSFFLFSFHVHEKAILLVLLPASLLLSEDRRDLSL 354

Query: 376 CVWFLFISTFSMFDLYIKDNLVLPSLTLMALYYTIIHDFARKS----------RLVYYIF 425
            + FL +  FS+F L  KDNL+L  + L   ++ I   F   S           +   ++
Sbjct: 355 FILFLNVGYFSLFPLLFKDNLLLIKVVLTLAWFIIYVGFTSISSPYLKRIFLFNISQILY 414

Query: 426 LGSLLGCVLLMC-IALGVAPPPRYQHLFSLFIATYSF 461
           +  L+  V+ +  + L V PP +Y  L+ L  + YS 
Sbjct: 415 IIGLIPIVIYLHFLDLFVPPPQKYPDLWLLLNSVYSC 451

N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one. In the human alg6 gene, a C->T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147. Length = 463

>gnl\|CDD\|216662 pfam01722, BolA, BolA-like protein	Back alignment and domain information

>gnl\|CDD\|223349 COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		731
KOG2575\|consensus		510		100.0
PF03155		469	Alg6_Alg8: ALG6, ALG8 glycosyltransferase family;	100.0
KOG2576\|consensus		500		100.0
COG0271		90	BolA Stress-induced morphogen (activity unknown) [	99.83
PRK11628		105	transcriptional regulator BolA; Provisional	99.82
KOG2313\|consensus		100		99.82
PF01722		76	BolA: BolA-like protein; InterPro: IPR002634 This	99.78
KOG3348\|consensus		85		99.64
COG5007		80	Predicted transcriptional regulator, BolA superfam	99.28
PF09594		241	DUF2029: Protein of unknown function (DUF2029); In	98.65
TIGR03459		470	crt_membr carotene biosynthesis associated membran	98.6
COG5542		420	Predicted integral membrane protein [Function unkn	97.74
COG5650		536	Predicted integral membrane protein [Function unkn	97.6
PF05208		368	ALG3: ALG3 protein; InterPro: IPR007873 The format	97.55
PF13231		159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	97.12
PLN02841		440	GPI mannosyltransferase	96.73
PF06728		382	PIG-U: GPI transamidase subunit PIG-U; InterPro: I	96.39
PRK13279		552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	96.38
KOG2762\|consensus		429		96.11
COG1807		535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	95.91
PF10131		616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	95.63
PF05007		259	Mannosyl_trans: Mannosyltransferase (PIG-M); Inter	95.45
PF02366		245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	95.32
PRK13375		409	pimE mannosyltransferase; Provisional	93.01
PF09852		449	DUF2079: Predicted membrane protein (DUF2079); Int	92.68
KOG3893\|consensus		405		92.09
PF04188		443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	92.04
PHA01514		485	O-antigen conversion protein C	90.62
TIGR03663		439	conserved hypothetical protein TIGR03663. Members	85.4
TIGR03766		483	conserved hypothetical integral membrane protein.	83.2

>KOG2575\|consensus	Back alignment and domain information

Probab=100.00  E-value=5.6e-147  Score=1166.91  Aligned_cols=466  Identities=45%  Similarity=0.774  Sum_probs=433.8

Q ss_pred             cccchhHHHH-HHHHHHHHHHHhccCCCCCCCCCCCCcchHHhhHHHHHhccCCcccccccccccccccccCCCCchHHH
Q psy3043          13 DQSQQYISFL-LIVSGLLLRWLTSLHPYSGQGKPPMFGDYEAQRHWMEITRHLPVSTWYQNTTDNDLLYWGLDYPPLTAY   91 (731)
Q Consensus        13 ~~~~~~~~~~-ii~~~~llR~~vsl~~ySG~~~pPm~gDfEaqRhWmeIT~~LPlseWY~n~ts~DL~yWgLDYPPLtAY   91 (731)
                      ..|++|.... ++++++++|+++|++||||+|+|||||||||||||||||.|||++|||+|+|+||||||||||||+|||
T Consensus        25 ~~~~~~~~~~~i~~~~l~~r~~Isl~pYSG~~~PPmyGDyEAQRHWmEIT~nLPv~qWY~n~t~NDLqYWGLDYPPLTAY  104 (510)
T KOG2575|consen   25 SKMEKWLLSSPILLVLLCVRSAISLNPYSGAGSPPMYGDYEAQRHWMEITVNLPVSQWYFNGTHNDLQYWGLDYPPLTAY  104 (510)
T ss_pred             CccchhhhHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHHhhcCcHHHHhhcCCCCccceecCCCCcHHHH
Confidence            3577888887 888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhCCCceEeccCCCCCCccceeeehhHHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHhccce
Q psy3043          92 HSLLCGYVAEYFVPDGVKLFTSHGHESYQHKYFMRLCVLVSDVLIYIPALLCFFSRTENSSSQRVSQTFVLSVALIYPGL  171 (731)
Q Consensus        92 ~s~llG~iA~~~~p~~v~L~~srg~es~~~klFMR~TVIvsDlli~~pAvl~~~~~~~~~~~~~~~~~~~~~liLlnPgL  171 (731)
                      |||++|.|++++||+||++++||||||.++|+|||.|||++|+++|+||+++|++++.|..+ +.++.+.++++++||++
T Consensus       105 hSyl~G~i~~f~NP~wvaL~tSRGfES~~hKlfMR~TViisd~liy~Pa~ify~~~~~r~~~-~~~~~a~~~~iLl~P~L  183 (510)
T KOG2575|consen  105 HSYLLGIIGNFINPEWVALHTSRGFESIAHKLFMRSTVIISDLLIYLPALIFYFKWLHRTRS-KKSKIAYAALILLYPSL  183 (510)
T ss_pred             HHHHHHHHHhhcChhHhhhhccCCcccHHHHHHHHHHHHHHhHHHHhhHHHHHHHHhhhccC-cccHHHHHHHHHhCCce
Confidence            99999999999999999999999999999999999999999999999999999999853321 22345678899999999


Q ss_pred             EEEeceeecchhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHhhhhcc---hhHHHHHHHHHH
Q psy3043         172 ILIDHGHFQFNCISLGLFIWACHHLHLNNPVCTAILFSLSVNYKQMELYHALPFFFYYLGHVYHT---TDIRLLLTLGSS  248 (731)
Q Consensus       172 ILIDHgHFQYNgvmLGLlLlSI~~L~~~r~llaAv~FslaLnfKqM~LY~APafF~YLL~~c~~~---~~i~rllkLg~v  248 (731)
                      ++||||||||||+|||++++|++.+.++.+++|+++|++|+|+|||+|||||+||+||||+|.++   .++.|++++|++
T Consensus       184 ~LID~GHFQYNsisLGl~~~ai~~ll~~~~~~as~~F~LAlnyKQMeLY~A~pfF~fLLg~c~k~k~~~~f~ri~~ia~~  263 (510)
T KOG2575|consen  184 LLIDHGHFQYNSISLGLTLYAIAALLKNFYVLASVLFVLALNYKQMELYHALPFFAFLLGSCLKPKLFNSFARIIKIALA  263 (510)
T ss_pred             EEEecCcceechhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999983   258999999999


Q ss_pred             HHHHHHHHHHHHhhh-hhHHHHHHHHcccccccchhhhhhhhhhhhHHHHHHhhcchhhHHHHHHHHHHHHHhhhhhhhc
Q psy3043         249 VLITFILVWLPFLSV-SQLGHVMYRLFPIYRGLFEDKVANFWCSANVVYKFTIYMTNDQMALMCLCTTLLAILPSCVSVF  327 (731)
Q Consensus       249 Vl~tfal~flPFl~~-~ql~Qvi~RLFPf~RGLfedyvANfWc~~n~~~K~~~~~~~~~l~~~slilTLla~lPs~v~L~  327 (731)
                      |+.||+++|+||+.+ ++..|+++|+|||+||+||||||||||+.|++.|+|++++.+++..+++++|+++.+|+|+.++
T Consensus       264 Vv~TF~iiw~P~~~~~~~~~qvl~RlFPf~RGlfEDKVANfWCt~n~~~K~k~~ft~q~~~~iSl~~Tli~~LPs~v~l~  343 (510)
T KOG2575|consen  264 VVGTFVIIWLPFLLSGDTALQVLHRLFPFARGLFEDKVANFWCTFNVFLKIKELFTQQQLQVISLAATLIGSLPSMVVLF  343 (510)
T ss_pred             HHHHHHHHHHHHHhccchHHHHHHHhCchhcchhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhHHHHHHh
Confidence            999999999999987 5999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCchhhHHHHHHHHhhhhhhcccccchhhhhhhhhhhhhccCCCCCcchhhhhhhhhccccccccCCCchhHHHHHHHH
Q psy3043         328 RKPNVVKFQQSLIVVSLGFFLFSFHVHEKSILLVSTPVILYLPRDPFPCVWFLFISTFSMFDLYIKDNLVLPSLTLMALY  407 (731)
Q Consensus       328 ~~Ps~~~Fl~al~~~slsFFLFSfqVHEKsILLpllPlsLL~~~~~~~~~~f~~vs~fSl~PLL~kd~L~l~yvvL~ll~  407 (731)
                      ++|+++.|.+++++||+||||||||||||+||+|++|+++|+.+.|.+..|++++++|||||||.|||+.++|++++++|
T Consensus       344 L~P~~~~f~~~L~~~slsFFLFSFQVHEKtILl~~LPa~lLls~~~~~~~~~~nva~FSm~PLL~kD~L~l~y~vl~~~f  423 (510)
T KOG2575|consen  344 LRPTNKGFLYGLTATSLSFFLFSFQVHEKTILLPALPALLLLSEYPSLVIWFLNVALFSMFPLLKKDGLLLPYVVLSFLF  423 (510)
T ss_pred             hcccccchhhhhHhhhhhhhheeeeechhhhHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHh--hc------ccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHhccccccccCCCceEEeheec
Q psy3043         408 YTIIH--DF------ARKSRLVYYIFLGSLLGCVLLMCIALGVAPPPRYQHLFSLFIATYSFEQSLSKLSPHFLISFVIL  479 (731)
Q Consensus       408 ~~l~~--~~------~~~~~~~~~~~~~sl~~~~~l~i~~~~v~PP~ryPdL~~lL~s~~s~~~~~~~~~~~F~~f~ly~  479 (731)
                      ++++.  .+      +.++.-++..+.++.+.|+.+.+++++++||+||||||+++|++.||+        ||.+|++ |
T Consensus       424 ~~ig~f~~~~k~~~~~~~~~pi~~~f~i~~i~~i~v~vl~l~i~pPqkyPdL~~ll~~~~s~~--------~F~~F~l-y  494 (510)
T KOG2575|consen  424 NWIGNFVVFYKTSLPRFKNYPIKYSFIIGTIIMISVVVLDLTIPPPQKYPDLWVLLNCFLSCV--------HFIYFLL-Y  494 (510)
T ss_pred             HHhcceEEEecccchhhccCchhhhhHHHHHHHHHHHhheeecCCcccCccHHHHHHHHHHHH--------HHHHHHH-H
Confidence            99753  11      111222567777888888888899999999999999999999999999        9999999 5


Q ss_pred             cCCCCceee
Q psy3043         480 GSGSQPFFA  488 (731)
Q Consensus       480 ~~~~~~~~~  488 (731)
                      +++.+.+.+
T Consensus       495 ~n~~~~~~s  503 (510)
T KOG2575|consen  495 TNYAIFTKS  503 (510)
T ss_pred             Hhhhheeec
Confidence            565554443

>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues	Back alignment and domain information

>KOG2576\|consensus	Back alignment and domain information

>COG0271 BolA Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	Back alignment and domain information

>PRK11628 transcriptional regulator BolA; Provisional	Back alignment and domain information

>KOG2313\|consensus	Back alignment and domain information

>PF01722 BolA: BolA-like protein; InterPro: IPR002634 This family consist of the morpho-protein BolA from Escherichia coli and its various homologs	Back alignment and domain information

>KOG3348\|consensus	Back alignment and domain information

>COG5007 Predicted transcriptional regulator, BolA superfamily [Transcription]	Back alignment and domain information

>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes	Back alignment and domain information

>TIGR03459 crt_membr carotene biosynthesis associated membrane protein	Back alignment and domain information

>COG5542 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>COG5650 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate	Back alignment and domain information

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

>PLN02841 GPI mannosyltransferase	Back alignment and domain information

>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase	Back alignment and domain information

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional	Back alignment and domain information

>KOG2762\|consensus	Back alignment and domain information

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein	Back alignment and domain information

>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif	Back alignment and domain information

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK13375 pimE mannosyltransferase; Provisional	Back alignment and domain information

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64	Back alignment and domain information

>KOG3893\|consensus	Back alignment and domain information

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface	Back alignment and domain information

>PHA01514 O-antigen conversion protein C	Back alignment and domain information

>TIGR03663 conserved hypothetical protein TIGR03663	Back alignment and domain information

>TIGR03766 conserved hypothetical integral membrane protein	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		731
2kdn_A		108	Putative uncharacterized protein PFE0790C; solutio	2e-08
3o2e_A		105	BOLA-like protein; ssgcid, iodide, SAD, seattle st	2e-08
1v9j_A		113	BOLA-like protein riken cDNA 1110025L05; stationar	7e-08
3tr3_A		82	BOLA; cellular processes, stress-induced, unknown	3e-07
1v60_A		123	BOLA1, riken cDNA 1810037G04; stationary phase mor	3e-07
2dhm_A		107	Protein BOLA; stationary-phase, stress-induced, mo	1e-06
1xs3_A		80	Hypothetical protein XC975; BOLA-like, structural	6e-06
1ny8_A		97	Protein YRBA; structure, autoassign, autostructure	7e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2kz0_A		76	BOLA family protein; BOLA protein family, human mo	2e-04

>2kdn_A Putative uncharacterized protein PFE0790C; solution structure, ssgcid, seattle structural genomics center for infectious disease; NMR {Plasmodium falciparum} Length = 108	Back alignment and structure

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 9/41 (21%)

Query: 615 DVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHR 655
           ++VD S GCG           F  +IVS+ FE K +L RHR
Sbjct: 43  ELVDKSCGCGT---------SFDAVIVSNNFEDKKLLDRHR 74

PyMOL of 2kdn

>3o2e_A BOLA-like protein; ssgcid, iodide, SAD, seattle structural genom center for infectious disease, BOL like protein, unknown FU; 1.95A {Babesia bovis} Length = 105	Back alignment and structure

>1v9j_A BOLA-like protein riken cDNA 1110025L05; stationary phase morphogene, stress-induced morphogene, structural genomics; NMR {Mus musculus} SCOP: d.52.6.1 Length = 113	Back alignment and structure

>3tr3_A BOLA; cellular processes, stress-induced, unknown function; 2.46A {Coxiella burnetii} Length = 82	Back alignment and structure

>1v60_A BOLA1, riken cDNA 1810037G04; stationary phase morphogene, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 123	Back alignment and structure

>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str} Length = 107	Back alignment and structure

>1xs3_A Hypothetical protein XC975; BOLA-like, structural genomics, AN integrated structural and functional genomic project, unknown function; NMR {Synthetic} Length = 80	Back alignment and structure

>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1 Length = 97	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2kz0_A BOLA family protein; BOLA protein family, human monocytotropic ehrlichiosis, STRE response, structural genomics; NMR {Ehrlichia chaffeensis} Length = 76	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		731
1v60_A		123	BOLA1, riken cDNA 1810037G04; stationary phase mor	99.87
2dhm_A		107	Protein BOLA; stationary-phase, stress-induced, mo	99.85
2kdn_A		108	Putative uncharacterized protein PFE0790C; solutio	99.75
3o2e_A		105	BOLA-like protein; ssgcid, iodide, SAD, seattle st	99.75
1v9j_A		113	BOLA-like protein riken cDNA 1110025L05; stationar	99.73
3tr3_A		82	BOLA; cellular processes, stress-induced, unknown	99.68
2kz0_A		76	BOLA family protein; BOLA protein family, human mo	99.67
1xs3_A		80	Hypothetical protein XC975; BOLA-like, structural	99.67
1ny8_A		97	Protein YRBA; structure, autoassign, autostructure	99.65

>1v60_A BOLA1, riken cDNA 1810037G04; stationary phase morphogene, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}	Back alignment and structure

Probab=99.87  E-value=3.7e-22  Score=185.57  Aligned_cols=108  Identities=27%  Similarity=0.382  Sum_probs=88.2

Q ss_pred             ccccccccc-ccccCCCCCccccCChhHHHHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEE
Q psy3043         562 DGTSRMASK-RVTTGLTVPPFFYFKGEEVVSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLI  640 (731)
Q Consensus       562 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~I  640 (731)
                      .|.+||+.+ .+-++-.-+    ....+++++|+++|+++| +|.+|       +|+|||+.|+||.   |||+||+|+|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~I~~~L~~~l-~p~~l-------~V~DeS~~H~~~~---G~gsHf~v~I   67 (123)
T 1v60_A            3 SGSSGMATRSCVSRGSAGS----AAAGPVEAAIRAKLEQAL-SPEVL-------ELRNESGGHAVPA---GSETHFRVAV   67 (123)
T ss_dssp             SSSCCCCCCCCCCCSCCCC----SSSCHHHHHHHHHHHHHT-CCSEE-------EEEECCCSSSCCT---TCCSEEEEEE
T ss_pred             CcchhhhhhhhhhhhccCC----CCCCcHHHHHHHHHHhhC-CCeEE-------EEEECcccccCCC---CCCCeEEEEE
Confidence            466777665 232322211    234668899999999996 99998       9999999999874   7899999999


Q ss_pred             ECcCCCCCCHHHHHHH--HHhHHHhcCCCceeeeeccchhhhhhhe
Q psy3043         641 VSDKFEGKGILQRHRK--ETYKKERRSPGKQEGVGSNPAKAWNFIL  684 (731)
Q Consensus       641 VS~~F~G~s~v~RHR~--~aL~~ei~~~i~~~~~~~~~~~~w~~~~  684 (731)
                      ||++|+||++|+|||+  ++|+|+|+++||++++.+.|.+||++..
T Consensus        68 VS~~F~Gks~v~RHRlVy~aL~~ei~~~IHALsi~t~TP~Ew~~~~  113 (123)
T 1v60_A           68 VSSRFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKTPAQWRENP  113 (123)
T ss_dssp             ECGGGTTCCHHHHHHHHHHHTHHHHTTTCSEEEEEEECTTTTTTCC
T ss_pred             EehhhCCCCHHHHHHHHHHHHHHHHcCCcceeEeEecCHHHHHhcc
Confidence            9999999999999999  9999999999999999776667797643

PyMOL of 1v60

>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str}	Back alignment and structure

>2kdn_A Putative uncharacterized protein PFE0790C; solution structure, ssgcid, seattle structural genomics center for infectious disease; NMR {Plasmodium falciparum}	Back alignment and structure

>3o2e_A BOLA-like protein; ssgcid, iodide, SAD, seattle structural genom center for infectious disease, BOL like protein, unknown FU; 1.95A {Babesia bovis}	Back alignment and structure

>1v9j_A BOLA-like protein riken cDNA 1110025L05; stationary phase morphogene, stress-induced morphogene, structural genomics; NMR {Mus musculus} SCOP: d.52.6.1	Back alignment and structure

>3tr3_A BOLA; cellular processes, stress-induced, unknown function; 2.46A {Coxiella burnetii}	Back alignment and structure

>2kz0_A BOLA family protein; BOLA protein family, human monocytotropic ehrlichiosis, STRE response, structural genomics; NMR {Ehrlichia chaffeensis}	Back alignment and structure

>1xs3_A Hypothetical protein XC975; BOLA-like, structural genomics, AN integrated structural and functional genomic project, unknown function; NMR {Synthetic}	Back alignment and structure

>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		731
d1ny8a_		97	d.52.6.1 (A:) Hypothetical protein YrbA {Escherich	1e-06
d1v9ja_		113	d.52.6.1 (A:) BolA-like protein {Mouse (Mus muscul	6e-05

>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli [TaxId: 562]} Length = 97	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: BolA-like
family: BolA-like
domain: Hypothetical protein YrbA
species: Escherichia coli [TaxId: 562]

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 629 VDGCGGKFTVLIVSDKFEGKGILQRHR 655
           V G G  F V+ V + F+G   +++ +
Sbjct: 26  VSGDGSHFQVIAVGELFDGMSRVKKQQ 52

PyMOL of d1ny8a_

>d1v9ja_ d.52.6.1 (A:) BolA-like protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 113	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		731
d1v9ja_		113	BolA-like protein {Mouse (Mus musculus) [TaxId: 10	99.67
d1ny8a_		97	Hypothetical protein YrbA {Escherichia coli [TaxId	99.38

>d1v9ja_ d.52.6.1 (A:) BolA-like protein {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: BolA-like
family: BolA-like
domain: BolA-like protein
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=2.3e-17  Score=149.24  Aligned_cols=77  Identities=31%  Similarity=0.394  Sum_probs=69.1

Q ss_pred             HHHHHHHHhhhhcCCceeeccccceEEEeCCCCCCCCCCCCCCCceEEEEEECcCCCCCCHHHHHHH--HHhHHHhcCCC
Q psy3043         590 VSTVFQFLSTVLTMPLHIVIYLVLQDVVDDSDGCGGNDVVDGCGGKFTVLIVSDKFEGKGILQRHRK--ETYKKERRSPG  667 (731)
Q Consensus       590 ~~~I~~kL~~al~~P~~L~~~~~~leV~DeS~~Hag~~~~~G~gsHF~V~IVS~~F~G~s~v~RHR~--~aL~~ei~~~i  667 (731)
                      +++|+++|+++| +|.+|       +|+|||++        |+|+||+|+|||+.|+|+++|+|||+  ++|+|+|+ ++
T Consensus        32 ~e~I~~kL~~~~-~~~~l-------eV~D~S~~--------h~G~Hf~i~IvS~~F~g~s~v~rHr~Vy~~L~~ei~-~i   94 (113)
T d1v9ja_          32 ADYLREKLRQDL-EAEHV-------EVEDTTLN--------RCATSFRVLVVSAKFEGKPLLQRHRLVNECLAEELP-HI   94 (113)
T ss_dssp             HHHHHHHHHHHH-TCSEE-------EEEECCSS--------SSCCCEEEEEECSHHHHSCHHHHHHHHHHHTTTTGG-GC
T ss_pred             HHHHHHHHHhhC-CCcEE-------EEEecCCC--------CCCceEEEEEEeccccCCchhHHHHhHHHHHHHHHh-cc
Confidence            568999999997 99998       99999986        45789999999999999999999999  99999996 59


Q ss_pred             ceeeeeccchhhhhhh
Q psy3043         668 KQEGVGSNPAKAWNFI  683 (731)
Q Consensus       668 ~~~~~~~~~~~~w~~~  683 (731)
                      |+.++.+.+.+||++-
T Consensus        95 HAlsi~t~Tp~Ew~~~  110 (113)
T d1v9ja_          95 HAFEQKTLTPEQWTRQ  110 (113)
T ss_dssp             SSEEEEEECHHHHHHS
T ss_pred             eeeEEEeCCHHHHHHh
Confidence            9999987777779874

PyMOL of d1v9ja_

>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure