Psyllid ID: psy3073

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
Protein Sequence
MMNYESLMGRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHEEcccccccEEEEccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mmnyeslmgrsdfkesSVRQAFVRKVYSILMVQLAITTAIISLFlfnpdlkmFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGItlgsvtvvfpfkadfilkkdkfrGVMGIIMnistnssvtvvFDAEQILYAVAITSLICLAITIFSfqtsvdftgsvtvvFDAEQILYAVAITSLICLAITIFSFqtsvdftvwGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDtqlmmggqhkyalspEEYIFAALNLYVDIIQIFLSILQIMSTQE
Flexible Loop (DISEMBL)
mmnyeslmgrsdfkessvRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE
Low Complexity Region (SEG)
MMNYESLMGRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE
Disordered region (IsUnstruct)
******************RQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIM****
Disordered Region (DISOPRED)
************FKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMST**
Disordered Region (DISEMBL)
****************SVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE
Disordered Region (DISPRO)
**********SDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMNYESLMGRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	303	2.2.26 [Sep-21-2011]
O88407	316	Protein lifeguard 2 OS=Ra	yes	N/A	0.768	0.737	0.308	1e-29
Q1LZ71	316	Protein lifeguard 2 OS=Bo	no	N/A	0.768	0.737	0.297	7e-29
Q5R4I4	316	Protein lifeguard 2 OS=Po	no	N/A	0.739	0.708	0.308	9e-29
Q9BWQ8	316	Protein lifeguard 2 OS=Ho	yes	N/A	0.739	0.708	0.308	1e-28
Q8K097	317	Protein lifeguard 2 OS=Mu	yes	N/A	0.739	0.706	0.308	1e-28
Q969X1	311	Protein lifeguard 3 OS=Ho	no	N/A	0.745	0.726	0.304	4e-28
Q7Z429	371	Protein lifeguard 1 OS=Ho	no	N/A	0.719	0.587	0.303	4e-28
Q6P6R0	348	Protein lifeguard 1 OS=Ra	no	N/A	0.706	0.614	0.307	3e-26
Q9ESF4	345	Protein lifeguard 1 OS=Mu	no	N/A	0.706	0.620	0.300	8e-26
Q8BJZ3	309	Protein lifeguard 3 OS=Mu	no	N/A	0.768	0.754	0.287	9e-26

>sp|O88407|LFG2_RAT Protein lifeguard 2 OS=Rattus norvegicus GN=Faim2 PE=2 SV=1

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 68/301 (22%)

Query: 3   NYESLMGRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFW 62
            +  L     + +  VRQ F+RKVY+IL+VQL +T A+++LF F   +K +V +N G++W
Sbjct: 83  GHHELFSTFSWDDQKVRQLFIRKVYTILLVQLLVTLAVVALFTFCDVVKDYVQANPGWYW 142

Query: 63  FMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDK 122
               + F   + +AC    RR +P N + L +FT+      G                  
Sbjct: 143 ASYAVFFATYLTLACCSGPRRHFPWNLILLTIFTLSMAYLTG------------------ 184

Query: 123 FRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFD 182
                           ++  ++   +L  + IT+L+CL++TIFSFQT  DFT    V+F 
Sbjct: 185 ---------------MLSSYYNTTSVLLCLGITALVCLSVTIFSFQTKFDFTSCHGVLF- 228

Query: 183 AEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVF 242
              +L      S + LAI +  FQ                 V +L ++  +         
Sbjct: 229 ---VLLMTLFFSGLLLAI-LLPFQ----------------YVPWLHAVYAVL-------- 260

Query: 243 LMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ 302
                GA +F+L+L +DTQL+MG + +++LSPEEYIF ALN+Y+DII IF   LQ+  T 
Sbjct: 261 -----GAGVFTLFLAFDTQLLMGNR-RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTN 314

Query: 303 E 303
            
Sbjct: 315 R 315

Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.
Rattus norvegicus (taxid: 10116)

>sp|Q1LZ71|LFG2_BOVIN Protein lifeguard 2 OS=Bos taurus GN=FAIM2 PE=2 SV=1

 Score =  127 bits (320), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 76/309 (24%)

Query: 3   NYESLMGRSD--------FKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFV 54
           +YES     D        + +  VR+ F+RKVY+IL++QL +T  +++LF F   +K +V
Sbjct: 75  SYESGFPTGDHEFFTTFSWDDQKVRRVFIRKVYTILLIQLLVTLGVVALFTFCDPVKDYV 134

Query: 55  VSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKA 114
            +N G++W    + F   + +AC    RR +P N + L +FT+      G          
Sbjct: 135 QANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTIFTLSMAYLTG---------- 184

Query: 115 DFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFT 174
                                   ++  ++   +L  ++IT+L+CL++T+FSFQT  DFT
Sbjct: 185 -----------------------MLSSYYNTTSVLLCLSITALVCLSVTVFSFQTKFDFT 221

Query: 175 GSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIF 234
               V+F    +L      S + LAI +  FQ                 V +L ++  + 
Sbjct: 222 SCQGVLF----VLLMTLFFSGLILAI-LLPFQ----------------YVPWLHAVYAVL 260

Query: 235 FPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLS 294
                        GA +F+L+L +DTQL+MG + +++LSPEEYIF ALN+Y+DII IF  
Sbjct: 261 -------------GAGVFTLFLAFDTQLLMGSR-RHSLSPEEYIFGALNIYLDIIYIFTF 306

Query: 295 ILQIMSTQE 303
            LQ+  T  
Sbjct: 307 FLQLFGTNR 315

Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.

Bos taurus (taxid: 9913)

>sp|Q5R4I4|LFG2_PONAB Protein lifeguard 2 OS=Pongo abelii GN=FAIM2 PE=2 SV=1

 Score =  127 bits (319), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 68/292 (23%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
            + +  VR+ FVRKVY+IL++QL +T A+++LF F   +K +V +N G++W    + F  
Sbjct: 92  SWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFAT 151

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
            + +AC    RR +P N + L +FT+      G                           
Sbjct: 152 YLTLACCSGPRRHFPWNLILLTVFTLSMAYLTG--------------------------- 184

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                  ++  ++   +L  + IT+L+CL++T+FSFQT  DFT    V+F    +L    
Sbjct: 185 ------MLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF----VLPMTL 234

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
             S + LAI +  FQ    +  W                         L  +    GA +
Sbjct: 235 FFSGLILAI-LLPFQ----YVPW-------------------------LHAVYAALGAGV 264

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           F+L+L  DTQL+MG + +++LSPEEYIF ALN+Y+DII IF   LQ+  T  
Sbjct: 265 FTLFLALDTQLLMGNR-RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNR 315

Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.

Pongo abelii (taxid: 9601)

>sp|Q9BWQ8|LFG2_HUMAN Protein lifeguard 2 OS=Homo sapiens GN=FAIM2 PE=1 SV=1

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 68/292 (23%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
            + +  VR+ FVRKVY+IL++QL +T A+++LF F   +K +V +N G++W    + F  
Sbjct: 92  SWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFAT 151

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
            + +AC    RR +P N + L +FT+      G                           
Sbjct: 152 YLTLACCSGPRRHFPWNLILLTVFTLSMAYLTG--------------------------- 184

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                  ++  ++   +L  + IT+L+CL++T+FSFQT  DFT    V+F    +L    
Sbjct: 185 ------MLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF----VLLMTL 234

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
             S + LAI +  FQ    +  W                         L  +    GA +
Sbjct: 235 FFSGLILAI-LLPFQ----YVPW-------------------------LHAVYAALGAGV 264

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           F+L+L  DTQL+MG + +++LSPEEYIF ALN+Y+DII IF   LQ+  T  
Sbjct: 265 FTLFLALDTQLLMGNR-RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNR 315

Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. May play a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.

Homo sapiens (taxid: 9606)

>sp|Q8K097|LFG2_MOUSE Protein lifeguard 2 OS=Mus musculus GN=Faim2 PE=1 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 68/292 (23%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
            + +  VR+ F+RKVY+IL+VQL +T A+++LF F   +K +V +N G++W    + F  
Sbjct: 93  SWDDQKVRRLFIRKVYTILLVQLLVTLAVVALFTFCDVVKDYVQANPGWYWASYAVFFAT 152

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
            + +AC    RR +P N + L +FT+      G                           
Sbjct: 153 YLTLACCSGPRRHFPWNLILLTIFTLSMAYLTG--------------------------- 185

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                  ++  ++   +L  + IT+L+CL++TIFSFQT  DFT    V+F    +L    
Sbjct: 186 ------MLSSYYNTTSVLLCLVITALVCLSVTIFSFQTKFDFTSCQGVLF----VLLMTL 235

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
             S + LA+ +  FQ                 V +L ++  +              GA +
Sbjct: 236 FFSGLLLAV-LLPFQ----------------YVPWLHAVYAVL-------------GAGV 265

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           F+L+L +DTQL+MG + +++LSPEEYIF ALN+Y+DII IF   LQ+  T  
Sbjct: 266 FTLFLAFDTQLLMGNR-RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNR 316

Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.

Mus musculus (taxid: 10090)

>sp|Q969X1|LFG3_HUMAN Protein lifeguard 3 OS=Homo sapiens GN=TMBIM1 PE=1 SV=2

 Score =  125 bits (314), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 70/296 (23%)

Query: 9   GRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLA 68
           G  ++ +  VR  F+RKVYSI+ VQL IT AII++F F   +  FV  N+  ++    + 
Sbjct: 85  GPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVF 144

Query: 69  FVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMG 128
            V  + +AC Q  RR +P N + L LFT   G   G+++ ++  KA              
Sbjct: 145 VVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKA-------------- 190

Query: 129 IIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILY 188
                              ++ A+ IT+++ +++TIF FQT VDFT              
Sbjct: 191 -------------------VIIAMIITAVVSISVTIFCFQTKVDFT-------------- 217

Query: 189 AVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCA- 247
             + T L C+                   L I  LV  + + +V++F     + ++  A 
Sbjct: 218 --SCTGLFCV-------------------LGIVLLVTGIVTSIVLYFQYVYWLHMLYAAL 256

Query: 248 GAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           GA+ F+L+L YDTQL++G + K+ +SPE+YI  AL +Y DII IF  +LQ+M  + 
Sbjct: 257 GAICFTLFLAYDTQLVLGNR-KHTISPEDYITGALQIYTDIIYIFTFVLQLMGDRN 311

Negatively regulates aortic matrix metalloproteinase-9 (MMP9) production and may play a protective role in vascular remodeling.

Homo sapiens (taxid: 9606)

>sp|Q7Z429|LFG1_HUMAN Protein lifeguard 1 OS=Homo sapiens GN=GRINA PE=2 SV=1

 Score =  125 bits (314), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 72/290 (24%)

Query: 11  SDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFV 70
           +++ + S+RQAF+RKV+ +L +QL++T + +S+F F  ++K FV  N+  ++    + F+
Sbjct: 150 TNWDDKSIRQAFIRKVFLVLTLQLSVTLSTVSVFTFVAEVKGFVRENVWTYYVSYAVFFI 209

Query: 71  LLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGII 130
            L+ ++C  D RR +P N V L + T      +G +       A F              
Sbjct: 210 SLIVLSCCGDFRRKHPWNLVALSVLTASLSYMVGMI-------ASF-------------- 248

Query: 131 MNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAV 190
                       ++ E ++ AV IT+ +C  + IFS QT  DFT                
Sbjct: 249 ------------YNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTS--------------- 281

Query: 191 AITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAV 250
                 C+                 G L ++ +V+F+F+++ IF  ++ L  +    GA+
Sbjct: 282 ------CM-----------------GVLLVSMVVLFIFAILCIFIRNRILEIVYASLGAL 318

Query: 251 LFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS 300
           LF+ +L  DTQL++G + + +LSPEEY+FAALNLY DII IFL IL I+ 
Sbjct: 319 LFTCFLAVDTQLLLGNK-QLSLSPEEYVFAALNLYTDIINIFLYILTIIG 367

Potential apoptotic regulator.

Homo sapiens (taxid: 9606)

>sp|Q6P6R0|LFG1_RAT Protein lifeguard 1 OS=Rattus norvegicus GN=Grina PE=2 SV=1

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 72/286 (25%)

Query: 15  ESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMA 74
           + S+RQAF+RKV+ +L +QL++T + +++F F  ++K FV +N+  ++    + F+ L+ 
Sbjct: 131 DKSIRQAFIRKVFLVLTLQLSVTLSTVAIFTFVGEVKGFVRANVWTYYVSYAIFFISLIV 190

Query: 75  MACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNIS 134
           ++C  D RR +P N V L + TI     +G +       A F                  
Sbjct: 191 LSCCGDFRRKHPWNLVALSILTISLSYMVGMI-------ASF------------------ 225

Query: 135 TNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITS 194
                   ++ E ++ AV IT+ +C  + IFS QT  DFT                    
Sbjct: 226 --------YNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTS------------------- 258

Query: 195 LICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSL 254
             C+                 G L ++ +V+F+F+++ IF  ++ L  +    GA+LF+ 
Sbjct: 259 --CM-----------------GVLLVSVVVLFIFAILCIFIRNRILEIVYASLGALLFTC 299

Query: 255 YLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS 300
           +L  DTQL++G + + +LSPEEY+FAALNLY DII IFL IL I+ 
Sbjct: 300 FLAVDTQLLLGNK-QLSLSPEEYVFAALNLYTDIINIFLYILTIIG 344

Potential apoptotic regulator.

Rattus norvegicus (taxid: 10116)

>sp|Q9ESF4|LFG1_MOUSE Protein lifeguard 1 OS=Mus musculus GN=Grina PE=2 SV=1

 Score =  117 bits (294), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 72/286 (25%)

Query: 15  ESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMA 74
           + ++RQAF+RKV+ +L +QL++T + +++F F  ++K FV  N+  ++    + F+ L+ 
Sbjct: 128 DKNIRQAFIRKVFLVLTLQLSVTLSTVAIFTFVGEVKGFVRENVWTYYVSYAIFFISLIV 187

Query: 75  MACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNIS 134
           ++C  D RR +P N V L + T+     +G +       A F                  
Sbjct: 188 LSCCGDFRRKHPWNLVALSILTVSLSYMVGMI-------ASF------------------ 222

Query: 135 TNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITS 194
                   ++ E ++ AV IT+ +C  + IFS QT  DFT                    
Sbjct: 223 --------YNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTS------------------- 255

Query: 195 LICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSL 254
             C+                 G L ++ +V+F+F+++ IF  ++ L  +    GA+LF+ 
Sbjct: 256 --CM-----------------GVLLVSVVVLFIFAILCIFIRNRILEIVYASLGALLFTC 296

Query: 255 YLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS 300
           +L  DTQL++G + + +LSPEEY+FAALNLY DII IFL IL I+ 
Sbjct: 297 FLAVDTQLLLGNK-QLSLSPEEYVFAALNLYTDIINIFLYILTIIG 341

Potential apoptotic regulator.

Mus musculus (taxid: 10090)

>sp|Q8BJZ3|LFG3_MOUSE Protein lifeguard 3 OS=Mus musculus GN=Tmbim1 PE=1 SV=1

 Score =  117 bits (294), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 73/306 (23%)

Query: 3   NYESLMGRSDFK-----ESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSN 57
           N E   G   F+     +  VR +F++KVY I+ VQL IT AII++F F   +  +V +N
Sbjct: 72  NEEERAGSDSFRPGEWDDRKVRHSFIQKVYCIISVQLLITVAIIAIFTFVEPVGKYVRNN 131

Query: 58  MGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFI 117
           +  ++    +  V  + +AC Q  RR +P + + L +FT+  G   G+++ ++  KA   
Sbjct: 132 VAVYYVSYAVFLVTYLTLACCQGPRRRFPWDIILLTIFTLALGFVTGTISSMYENKA--- 188

Query: 118 LKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSV 177
                                         ++ A+ IT+++ +++TIF FQT VDFT   
Sbjct: 189 ------------------------------VIIAMIITAVVSISVTIFCFQTKVDFT--- 215

Query: 178 TVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPS 237
                        + T L C               V G  L +  +V    S+V+IF   
Sbjct: 216 -------------SCTGLFC---------------VLGIVLMVTGIVT---SIVLIFKYI 244

Query: 238 KTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQ 297
             L  +    GA+ F+L+L YDTQL++G + K+ +SPE+YI  AL +Y DI+ IF  +LQ
Sbjct: 245 YWLHMVYAALGAICFTLFLAYDTQLVLGNR-KHTISPEDYITGALQIYTDIVYIFTFVLQ 303

Query: 298 IMSTQE 303
           ++ +++
Sbjct: 304 LVGSRD 309

Negatively regulates aortic matrix metalloproteinase-9 (MMP9) production and may play a protective role in vascular remodeling.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
158294325	241	AGAP005529-PC [Anopheles gambiae str. PE	0.729	0.917	0.386	1e-49
158294321	320	AGAP005529-PA [Anopheles gambiae str. PE	0.729	0.690	0.393	1e-49
321457436	239	hypothetical protein DAPPUDRAFT_63064 [D	0.755	0.958	0.383	2e-48
312374513	319	hypothetical protein AND_15831 [Anophele	0.729	0.692	0.397	4e-48
157128927	319	nmda receptor glutamate-binding chain [A	0.729	0.692	0.383	4e-48
170060737	310	fas apoptotic inhibitory molecule 2 [Cul	0.729	0.712	0.386	1e-47
156538475	312	PREDICTED: glutamate [NMDA] receptor-ass	0.759	0.737	0.365	8e-47
290560657	315	glutamate [NMDA] receptor-associated pro	0.729	0.701	0.386	6e-46
87248145	321	glutamate receptor Gr2 [Bombyx mori]	0.729	0.688	0.386	6e-46
157103171	248	nmda receptor glutamate-binding chain [A	0.702	0.858	0.395	1e-45

>gi|158294325|ref|XP_556168.3| AGAP005529-PC [Anopheles gambiae str. PEST] gi|157015512|gb|EAL39852.3| AGAP005529-PC [Anopheles gambiae str. PEST]

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 160/292 (54%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           +F + S+R+ F+RKVYSIL VQLAIT   I+LFL++   K++V ++   FW    +  V 
Sbjct: 20  EFNDQSIRRGFIRKVYSILTVQLAITLGFITLFLYHRPTKLWVQNHPEMFWIALGVMVVT 79

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L++MAC  D+RR  P+N++FL LFT+ Q   LG                           
Sbjct: 80  LISMACCGDVRRKAPMNFIFLTLFTLAQAFLLG--------------------------- 112

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                   T  F +++++ AV IT+ +CL +T+F+FQT  D                   
Sbjct: 113 ------VTTANFSSQEVMLAVGITAAVCLGLTLFAFQTKWD------------------- 147

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FTV GG L +A L++ LF L+ IFFP KT+  +   AGA++
Sbjct: 148 -------------------FTVMGGILFVAVLILMLFGLIAIFFPGKTITLVYASAGALI 188

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLM+GG+HKY++SPEEYIFAALNLY+DI+ IFL IL I+    
Sbjct: 189 FSIYLVYDTQLMLGGEHKYSISPEEYIFAALNLYLDIVNIFLYILTIIGASR 240

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158294321|ref|XP_001688676.1| AGAP005529-PA [Anopheles gambiae str. PEST] gi|158294323|ref|XP_001688677.1| AGAP005529-PB [Anopheles gambiae str. PEST] gi|157015510|gb|EDO63682.1| AGAP005529-PA [Anopheles gambiae str. PEST] gi|157015511|gb|EDO63683.1| AGAP005529-PB [Anopheles gambiae str. PEST]

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 162/292 (55%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           +F + S+R+ F+RKVYSIL VQLAIT   I+LFL++   K++V ++   FW    +  V 
Sbjct: 99  EFNDQSIRRGFIRKVYSILTVQLAITLGFITLFLYHRPTKLWVQNHPEMFWIALGVMVVT 158

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L++MAC  D+RR  P+N++FL LFT+ Q   LG VT                        
Sbjct: 159 LISMACCGDVRRKAPMNFIFLTLFTLAQAFLLG-VT------------------------ 193

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                   T  F +++++ AV IT+ +CL +T+F+FQT  D                   
Sbjct: 194 --------TANFSSQEVMLAVGITAAVCLGLTLFAFQTKWD------------------- 226

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FTV GG L +A L++ LF L+ IFFP KT+  +   AGA++
Sbjct: 227 -------------------FTVMGGILFVAVLILMLFGLIAIFFPGKTITLVYASAGALI 267

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLM+GG+HKY++SPEEYIFAALNLY+DI+ IFL IL I+    
Sbjct: 268 FSIYLVYDTQLMLGGEHKYSISPEEYIFAALNLYLDIVNIFLYILTIIGASR 319

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321457436|gb|EFX68523.1| hypothetical protein DAPPUDRAFT_63064 [Daphnia pulex]

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/305 (38%), Positives = 161/305 (52%), Gaps = 76/305 (24%)

Query: 3   NYESLMGRSD----FKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNM 58
           +YES  G  D    F E S+R AFVRKVY+ILMVQLAIT   ISLF++ P++KM+   + 
Sbjct: 6   DYES-GGLGDAAFSFSEKSIRMAFVRKVYAILMVQLAITVGFISLFVYEPNVKMYSREHP 64

Query: 59  GFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFIL 118
             +W   ++ FVLL+ +AC  D RR +PLN + L LFT  +G  LG              
Sbjct: 65  EMWWIAFVMTFVLLIVLACCNDFRRRWPLNIILLGLFTACEGFMLG-------------- 110

Query: 119 KKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVT 178
                              +V+ ++ +E +L A  I + +CLA+TIF+ QT  DFT    
Sbjct: 111 -------------------AVSSLYRSEDVLIAAGICTAVCLALTIFAMQTKWDFTAC-- 149

Query: 179 VVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSK 238
                                               GG L +  +V+F+F +V I  P K
Sbjct: 150 ------------------------------------GGILFVCVIVLFIFGIVAICIPGK 173

Query: 239 TLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQI 298
            +  +    GA+LFS+YL++DTQLM+GG+HKY++SPEEYIFAALNLY+DII IFL IL I
Sbjct: 174 VIHLVYASLGALLFSVYLVFDTQLMLGGKHKYSISPEEYIFAALNLYLDIINIFLYILAI 233

Query: 299 MSTQE 303
           +    
Sbjct: 234 VGGSR 238

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374513|gb|EFR22056.1| hypothetical protein AND_15831 [Anopheles darlingi]

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/292 (39%), Positives = 162/292 (55%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           +F + S+R+ F+RKVYSIL VQL IT   ISLFL++   +++V ++   FW    +  V 
Sbjct: 98  EFNDQSIRRGFIRKVYSILTVQLLITLGFISLFLYHRPTQLWVKNHPEMFWIALGVMIVT 157

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L++MAC  D+RR  P+N++FL LFT+ Q   L +VT                        
Sbjct: 158 LISMACCGDVRRKAPMNFIFLTLFTLAQAFLL-AVT------------------------ 192

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
             S N      F++++++ AV IT+ +CL +T+F+FQT  D                   
Sbjct: 193 --SAN------FNSQEVMLAVGITAAVCLGLTLFAFQTKWD------------------- 225

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FTV GG L +A LV+ LF LV IFFP KT+  +   AGA++
Sbjct: 226 -------------------FTVMGGILFVAVLVLMLFGLVAIFFPGKTITLVYASAGALI 266

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLM+GG HKY++SPEEYIFAALNLY+DI+ IFL IL I+    
Sbjct: 267 FSIYLVYDTQLMLGGSHKYSISPEEYIFAALNLYLDIVNIFLYILTIIGASR 318

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157128927|ref|XP_001661552.1| nmda receptor glutamate-binding chain [Aedes aegypti] gi|108872427|gb|EAT36652.1| AAEL011272-PA, partial [Aedes aegypti]

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 159/292 (54%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           DF + S+R+ F+RKVYSIL VQL IT   I+LF+++   K++V  +   FW    +  V 
Sbjct: 98  DFSDQSIRKGFIRKVYSILTVQLGITLGFIALFMYHKGTKLWVQRHPEMFWIALGVMIVT 157

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L++MAC  ++RR  P+N++FL L+T  Q   LG VT                        
Sbjct: 158 LISMACCGNVRRKAPMNFIFLALYTFAQSFLLG-VT------------------------ 192

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
                   T  F ++++L AV IT+ +CL +T+F+FQ+  D                   
Sbjct: 193 --------TANFSSDEVLLAVGITAAVCLGLTLFAFQSKWD------------------- 225

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FTV GG L +A +++ LF ++ IFFP KT+  +   AGA+L
Sbjct: 226 -------------------FTVMGGVLFVAVIILMLFGIIAIFFPGKTITIVYASAGALL 266

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLMMGG+HKY++SPEEYIFAALNLY+DII IF+ IL I+    
Sbjct: 267 FSIYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFMYILTIIGASR 318

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170060737|ref|XP_001865933.1| fas apoptotic inhibitory molecule 2 [Culex quinquefasciatus] gi|167879114|gb|EDS42497.1| fas apoptotic inhibitory molecule 2 [Culex quinquefasciatus]

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 157/292 (53%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           DF + S+R+ F+RKVYSILMVQL IT   I LF+++   K++V  +   FW    +  V 
Sbjct: 89  DFTDQSIRKGFIRKVYSILMVQLGITLGFICLFMYHEPTKVWVQRHPELFWIAFGVMLVT 148

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           +++MAC   +RR  P+N++FL LFT+                             M  +M
Sbjct: 149 MISMACCDSVRRKSPMNFIFLGLFTL----------------------------AMSFLM 180

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
            ++T       F ++++L AV IT+ +CL +T+F+FQT  D                   
Sbjct: 181 GVTTAR-----FSSQEVLLAVGITAAVCLGLTLFAFQTKWD------------------- 216

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FTV GG L +A LV+ LF L+ IFFP KT+  +    GA+L
Sbjct: 217 -------------------FTVMGGMLFVAALVLMLFGLIAIFFPGKTITLVYASLGALL 257

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS YL+YDTQLMMGG+HKY++SPEEYIFAALNLY+DII IF+ IL I+    
Sbjct: 258 FSFYLVYDTQLMMGGKHKYSISPEEYIFAALNLYLDIINIFMFILTIIGASR 309

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156538475|ref|XP_001606658.1| PREDICTED: glutamate [NMDA] receptor-associated protein 1-like [Nasonia vitripennis]

 Score =  193 bits (490), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 160/304 (52%), Gaps = 74/304 (24%)

Query: 3   NYESLMGRSD---FKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMG 59
           NY    G      F ++++RQAF+RKVYSIL++QL IT  +++LF F+ + K F   N+ 
Sbjct: 79  NYNEEDGEVKGFSFNDTTIRQAFIRKVYSILLLQLLITFGVVALFTFSHNAKEFAAKNVS 138

Query: 60  FFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILK 119
             +    + F LL+AMAC   +RR  P+N++FL +FT+ + + LG               
Sbjct: 139 VMYICMAITFGLLIAMACCTSVRRKAPMNFIFLFIFTLAESVMLG--------------- 183

Query: 120 KDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTV 179
                              V+   D   ++ AV IT+ IC A+T+FSFQT +DFTG+ T 
Sbjct: 184 ------------------FVSSQHDEGSVILAVGITAFICFALTLFSFQTKIDFTGAGTY 225

Query: 180 VFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKT 239
           +F                                      IA L + LF  + IF+  +T
Sbjct: 226 LF--------------------------------------IAALCLMLFGFIAIFWHGRT 247

Query: 240 LVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIM 299
           ++ +  C GA+LFS YL+YDTQLM+GG+HKY+LSPEEYIFAALNLY+DI+ IF+ IL I+
Sbjct: 248 VILVYSCLGALLFSFYLVYDTQLMLGGKHKYSLSPEEYIFAALNLYLDIVNIFIYILSII 307

Query: 300 STQE 303
               
Sbjct: 308 GASR 311

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|290560657|ref|NP_001040129.2| glutamate [NMDA] receptor-associated protein 1 [Bombyx mori] gi|87248143|gb|ABD36124.1| glutamate receptor Gr1 [Bombyx mori]

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 155/292 (53%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           DF E S+R+AF+RKVY+ILM QL +T   I+LFL++   K++V  N   FW   ++  V 
Sbjct: 94  DFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVC 153

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L+AMAC  D+RR  P N++FL +FT  Q   LG                           
Sbjct: 154 LIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLG--------------------------- 186

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
            IS +     V+ A+ +L AV IT+ +CL +T+F+ QT  D                   
Sbjct: 187 -ISAS-----VYQADAVLMAVGITAAVCLGLTLFALQTKWD------------------- 221

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FT+ GG L  AT+V+ +F +V IF   K +  +    GA++
Sbjct: 222 -------------------FTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYASLGALI 262

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLMMGG+HKY++SPEEYIFAALNLY+DII IFL IL I+    
Sbjct: 263 FSIYLVYDTQLMMGGKHKYSISPEEYIFAALNLYLDIINIFLFILTIIGASR 314

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

>gi|87248145|gb|ABD36125.1| glutamate receptor Gr2 [Bombyx mori]

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 155/292 (53%), Gaps = 71/292 (24%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVL 71
           DF E S+R+AF+RKVY+ILM QL +T   I+LFL++   K++V  N   FW   ++  V 
Sbjct: 100 DFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVC 159

Query: 72  LMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIM 131
           L+AMAC  D+RR  P N++FL +FT  Q   LG                           
Sbjct: 160 LIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLG--------------------------- 192

Query: 132 NISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVA 191
            IS +     V+ A+ +L AV IT+ +CL +T+F+ QT  D                   
Sbjct: 193 -ISAS-----VYQADAVLMAVGITAAVCLGLTLFALQTKWD------------------- 227

Query: 192 ITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVL 251
                              FT+ GG L  AT+V+ +F +V IF   K +  +    GA++
Sbjct: 228 -------------------FTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYASLGALI 268

Query: 252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQE 303
           FS+YL+YDTQLMMGG+HKY++SPEEYIFAALNLY+DII IFL IL I+    
Sbjct: 269 FSIYLVYDTQLMMGGKHKYSISPEEYIFAALNLYLDIINIFLFILTIIGASR 320

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157103171|ref|XP_001647853.1| nmda receptor glutamate-binding chain [Aedes aegypti] gi|157128728|ref|XP_001661494.1| nmda receptor glutamate-binding chain [Aedes aegypti] gi|108872491|gb|EAT36716.1| AAEL011221-PA [Aedes aegypti] gi|108884685|gb|EAT48910.1| AAEL000045-PA [Aedes aegypti]

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/288 (39%), Positives = 155/288 (53%), Gaps = 75/288 (26%)

Query: 12  DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSN--MGFFWFMNLLAF 69
            F E S+R+AF+RKVY IL VQLAIT A ISLF+++   +++ + N  +G   F+ +  F
Sbjct: 33  SFSEESIRKAFIRKVYLILTVQLAITMAFISLFMYHAPARIWTMQNPWVGTIAFVTM--F 90

Query: 70  VLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGI 129
            +L+ MAC  ++RR  P N++FL +FT  QG+ LG                         
Sbjct: 91  AVLIIMACCGEMRRKTPHNFIFLAMFTAAQGLMLG------------------------- 125

Query: 130 IMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYA 189
                    V   +D+ ++L AV IT  IC+ +T+FSFQT  D                 
Sbjct: 126 --------IVATAYDSNEVLMAVGITCAICVGLTLFSFQTKWD----------------- 160

Query: 190 VAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGA 249
                                FTV GGFL +  LV+F+F ++V FFP      +    GA
Sbjct: 161 ---------------------FTVMGGFLFVGLLVVFIFGIIVAFFPGSAASSVYSACGA 199

Query: 250 VLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQ 297
           +LFSLYL+YDTQLM+GG HKY++SPEEYIFAALNLY+DII IFL IL+
Sbjct: 200 LLFSLYLIYDTQLMIGGNHKYSISPEEYIFAALNLYLDIINIFLFILR 247

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
FB|FBgn0013305	324	Nmda1 "N-methyl-D-aspartate re	0.435	0.407	0.533	6.1e-52
UNIPROTKB|F1MP63	301	TMBIM1B "Uncharacterized prote	0.412	0.415	0.444	2e-47
ZFIN|ZDB-GENE-040426-1367	337	grina "glutamate receptor, ion	0.462	0.415	0.423	4.7e-44
RGD|628744	316	Faim2 "Fas apoptotic inhibitor	0.462	0.443	0.404	7.5e-42
UNIPROTKB|Q1LZ71	316	FAIM2 "Protein lifeguard 2" [B	0.462	0.443	0.397	4.1e-41
UNIPROTKB|F1SHA9	316	FAIM2 "Uncharacterized protein	0.462	0.443	0.397	5.2e-41
MGI|MGI:1919643	317	Faim2 "Fas apoptotic inhibitor	0.462	0.441	0.397	5.2e-41
UNIPROTKB|B3KR08	270	FAIM2 "Protein lifeguard 2" [H	0.462	0.518	0.390	5.2e-41
UNIPROTKB|Q9BWQ8	316	FAIM2 "Protein lifeguard 2" [H	0.462	0.443	0.390	5.2e-41
UNIPROTKB|Q5R4I4	316	FAIM2 "Protein lifeguard 2" [P	0.462	0.443	0.390	5.2e-41

FB|FBgn0013305 Nmda1 "N-methyl-D-aspartate receptor-associated protein" [Drosophila melanogaster (taxid:7227)]

 Score = 355 (130.0 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
 Identities = 72/135 (53%), Positives = 97/135 (71%)

Query:   167 FQTSVDFTGSVTVV-FDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVM 225
             F  +  F   V+   +  +++L AV IT+ +CLA+TIF+ QT  DFT+ GG L IA +V+
Sbjct:   186 FTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGIL-IACMVV 244

Query:   226 FL-FSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNL 284
             FL F +V IF   K +  +    GA+LFS+YL+YDTQLMMGG+HKY++SPEEYIFAALNL
Sbjct:   245 FLIFGIVAIFVKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNL 304

Query:   285 YVDIIQIFLSILQIM 299
             Y+DII IF+ IL I+
Sbjct:   305 YLDIINIFMYILTII 319

GO:0017146 "N-methyl-D-aspartate selective glutamate receptor complex" evidence=ISS

GO:0004972 "N-methyl-D-aspartate selective glutamate receptor activity" evidence=ISS

UNIPROTKB|F1MP63 TMBIM1B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 300 (110.7 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
 Identities = 56/126 (44%), Positives = 90/126 (71%)

Query:   175 GSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIF 234
             G+V+V +  E++L+A A T+L+ L++++F+ QT  DFT+  G L +   V+ ++ +++IF
Sbjct:   172 GTVSVFYHVEEVLWATAATALVTLSLSLFALQTKWDFTLLNGMLFVLLFVLIIYGIILIF 231

Query:   235 FPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYA-LSPEEYIFAALNLYVDIIQIFL 293
               +  L  L    G V+FSLYL+ D QLM+GG+H ++ L PEEY+FAALN+Y+DII +FL
Sbjct:   232 IRAYWLHLLYAGLGTVIFSLYLVMDVQLMVGGRHHHSDLDPEEYVFAALNIYMDIINLFL 291

Query:   294 SILQIM 299
              ILQ++
Sbjct:   292 FILQLI 297

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1367 grina "glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)" [Danio rerio (taxid:7955)]

 Score = 300 (110.7 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 61/144 (42%), Positives = 95/144 (65%)

Query:   156 SLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWG 215
             +LICL++   +    V   G ++  +D + ++ A+ IT ++C  + IFS QT  DFT   
Sbjct:   193 NLICLSVLTLAMSYMV---GVISSFYDTDIVIMAIGITVVVCFTVIIFSMQTKYDFTSCY 249

Query:   216 GFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             G L +  +V+F+F ++ I F SK +  +    GA+LF+ +L  DTQL++G ++  +LSPE
Sbjct:   250 GVLFVCGIVLFVFGILCIIFYSKIMDLIYSTLGALLFTCFLAVDTQLLLGNKN-LSLSPE 308

Query:   276 EYIFAALNLYVDIIQIFLSILQIM 299
             EYIFA+LNLY+DIIQIFL IL+I+
Sbjct:   309 EYIFASLNLYLDIIQIFLFILRIL 332

GO:0043066 "negative regulation of apoptotic process" evidence=IDA

GO:1901215 "negative regulation of neuron death" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

RGD|628744 Faim2 "Fas apoptotic inhibitory molecule 2" [Rattus norvegicus (taxid:10116)]

 Score = 276 (102.2 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
 Identities = 59/146 (40%), Positives = 93/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +TIF+   +   TG ++  ++   +L  + IT+L+CL++TIFSFQT  DFT   G L 
Sbjct:   170 ILLTIFTLSMAY-LTGMLSSYYNTTSVLLCLGITALVCLSVTIFSFQTKFDFTSCHGVLF 228

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L +DTQL+MG + +++LSPE
Sbjct:   229 VLLMTLFFSGLLLAILLPFQYVPWLHAVYAVLGAGVFTLFLAFDTQLLMGNR-RHSLSPE 287

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   288 EYIFGALNIYLDIIYIFTFFLQLFGT 313

GO:0005886 "plasma membrane" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEP

GO:0016021 "integral to membrane" evidence=IEA

GO:0021549 "cerebellum development" evidence=ISO;ISS

GO:0021680 "cerebellar Purkinje cell layer development" evidence=ISO;ISS

GO:0021681 "cerebellar granular layer development" evidence=ISO;ISS

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISO;ISS

GO:0030054 "cell junction" evidence=IEA

GO:0043523 "regulation of neuron apoptotic process" evidence=ISO;ISS

GO:0045121 "membrane raft" evidence=ISO;ISS

GO:0045211 "postsynaptic membrane" evidence=IEA

UNIPROTKB|Q1LZ71 FAIM2 "Protein lifeguard 2" [Bos taurus (taxid:9913)]

 Score = 278 (102.9 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
 Identities = 58/146 (39%), Positives = 94/146 (64%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +TIF+   +   TG ++  ++   +L  ++IT+L+CL++T+FSFQT  DFT   G L 
Sbjct:   170 ILLTIFTLSMAY-LTGMLSSYYNTTSVLLCLSITALVCLSVTVFSFQTKFDFTSCQGVLF 228

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L +DTQL+MG + +++LSPE
Sbjct:   229 VLLMTLFFSGLILAILLPFQYVPWLHAVYAVLGAGVFTLFLAFDTQLLMGSR-RHSLSPE 287

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   288 EYIFGALNIYLDIIYIFTFFLQLFGT 313

GO:0045121 "membrane raft" evidence=ISS

GO:0043523 "regulation of neuron apoptotic process" evidence=ISS

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS

GO:0021681 "cerebellar granular layer development" evidence=ISS

GO:0021680 "cerebellar Purkinje cell layer development" evidence=ISS

GO:0021549 "cerebellum development" evidence=ISS

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

UNIPROTKB|F1SHA9 FAIM2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 277 (102.6 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 58/146 (39%), Positives = 93/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +TIF+   +   TG ++  ++   +L  + IT+L+CL++T+FSFQT  DFT   G L 
Sbjct:   170 ILLTIFTLSMAY-LTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF 228

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L +DTQL+MG + +++LSPE
Sbjct:   229 VLLMTLFFSGLILAILLPFQYVPWLHAVYAVLGAGVFTLFLAFDTQLLMGSR-RHSLSPE 287

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   288 EYIFGALNIYLDIIYIFTFFLQLFGT 313

GO:0045121 "membrane raft" evidence=IEA

GO:0043523 "regulation of neuron apoptotic process" evidence=IEA

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA

GO:0021681 "cerebellar granular layer development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1919643 Faim2 "Fas apoptotic inhibitory molecule 2" [Mus musculus (taxid:10090)]

 Score = 275 (101.9 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 58/146 (39%), Positives = 93/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +TIF+   +   TG ++  ++   +L  + IT+L+CL++TIFSFQT  DFT   G L 
Sbjct:   171 ILLTIFTLSMAY-LTGMLSSYYNTTSVLLCLVITALVCLSVTIFSFQTKFDFTSCQGVLF 229

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ +  P + + +L       GA +F+L+L +DTQL+MG + +++LSPE
Sbjct:   230 VLLMTLFFSGLLLAVLLPFQYVPWLHAVYAVLGAGVFTLFLAFDTQLLMGNR-RHSLSPE 288

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   289 EYIFGALNIYLDIIYIFTFFLQLFGT 314

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0021549 "cerebellum development" evidence=IMP

GO:0021680 "cerebellar Purkinje cell layer development" evidence=IMP

GO:0021681 "cerebellar granular layer development" evidence=IMP

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0043523 "regulation of neuron apoptotic process" evidence=ISO;IMP

GO:0045121 "membrane raft" evidence=ISO;IDA

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

UNIPROTKB|B3KR08 FAIM2 "Protein lifeguard 2" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 57/146 (39%), Positives = 92/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +T+F+   +   TG ++  ++   +L  + IT+L+CL++T+FSFQT  DFT   G L 
Sbjct:   124 ILLTVFTLSMAY-LTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF 182

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L  DTQL+MG + +++LSPE
Sbjct:   183 VLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNR-RHSLSPE 241

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   242 EYIFGALNIYLDIIYIFTFFLQLFGT 267

GO:0016021 "integral to membrane" evidence=IEA

GO:0021681 "cerebellar granular layer development" evidence=IEA

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA

GO:0043523 "regulation of neuron apoptotic process" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

UNIPROTKB|Q9BWQ8 FAIM2 "Protein lifeguard 2" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 57/146 (39%), Positives = 92/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +T+F+   +   TG ++  ++   +L  + IT+L+CL++T+FSFQT  DFT   G L 
Sbjct:   170 ILLTVFTLSMAY-LTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF 228

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L  DTQL+MG + +++LSPE
Sbjct:   229 VLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNR-RHSLSPE 287

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   288 EYIFGALNIYLDIIYIFTFFLQLFGT 313

GO:0006915 "apoptotic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0043523 "regulation of neuron apoptotic process" evidence=IMP

GO:0045121 "membrane raft" evidence=IDA

GO:0021549 "cerebellum development" evidence=ISS

GO:0021680 "cerebellar Purkinje cell layer development" evidence=ISS

GO:0021681 "cerebellar granular layer development" evidence=ISS

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS

UNIPROTKB|Q5R4I4 FAIM2 "Protein lifeguard 2" [Pongo abelii (taxid:9601)]

 Score = 273 (101.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 57/146 (39%), Positives = 92/146 (63%)

Query:   160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
             + +T+F+   +   TG ++  ++   +L  + IT+L+CL++T+FSFQT  DFT   G L 
Sbjct:   170 ILLTVFTLSMAY-LTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLF 228

Query:   220 IATLVMFLFSLVV-IFFPSKTLVFL---MGCAGAVLFSLYLLYDTQLMMGGQHKYALSPE 275
             +  + +F   L++ I  P + + +L       GA +F+L+L  DTQL+MG + +++LSPE
Sbjct:   229 VLPMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNR-RHSLSPE 287

Query:   276 EYIFAALNLYVDIIQIFLSILQIMST 301
             EYIF ALN+Y+DII IF   LQ+  T
Sbjct:   288 EYIFGALNIYLDIIYIFTFFLQLFGT 313

GO:0021549 "cerebellum development" evidence=ISS

GO:0021680 "cerebellar Purkinje cell layer development" evidence=ISS

GO:0021681 "cerebellar granular layer development" evidence=ISS

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=ISS

GO:0043523 "regulation of neuron apoptotic process" evidence=ISS

GO:0045121 "membrane raft" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8K097	LFG2_MOUSE	No assigned EC number	0.3082	0.7392	0.7066	yes	N/A
Q9BWQ8	LFG2_HUMAN	No assigned EC number	0.3082	0.7392	0.7088	yes	N/A
O88407	LFG2_RAT	No assigned EC number	0.3089	0.7689	0.7373	yes	N/A
P48558	BXI1_YEAST	No assigned EC number	0.2393	0.8184	0.8350	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	303
cd10428	217	cd10428, LFG_like, Proteins similar to and includi	3e-42
cd10429	233	cd10429, GAAP_like, Golgi antiapoptotic protein	2e-41
pfam01027	205	pfam01027, Bax1-I, Inhibitor of apoptosis-promotin	1e-18
cd10432	211	cd10432, BI-1-like_bacterial, Bacterial BAX inhibi	3e-17
cd06181	202	cd06181, BI-1-like, BAX inhibitor (BI)-1/YccA-like	9e-17
COG0670	233	COG0670, COG0670, Integral membrane protein, inter	6e-13
cd10433	205	cd10433, YccA_like, YccA-like proteins	4e-08
cd10431	264	cd10431, GHITM, Growth-hormone inducible transmemb	1e-07
cd10430	213	cd10430, BI-1, BAX inhibitor (BI)-1	3e-07

>gnl|CDD|198410 cd10428, LFG_like, Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis

 Score =  144 bits (366), Expect = 3e-42
 Identities = 71/145 (48%), Positives = 97/145 (66%), Gaps = 4/145 (2%)

Query: 155 TSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVW 214
            +LI L I   +        G++   +D + +L AV IT+++CL +T+F+FQT  DFT  
Sbjct: 76  WNLILLGIFTLAMSY---MLGTIASFYDTKAVLIAVGITAVVCLGLTLFAFQTKYDFTSC 132

Query: 215 GGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSP 274
           GG L + ++V+ +F +V IFF  K L  +    GA+LFSLYL  DTQL+MGG  KY LSP
Sbjct: 133 GGVLFVLSIVLLIFGIVAIFFYVKWLHIVYASLGALLFSLYLAVDTQLLMGG-RKYELSP 191

Query: 275 EEYIFAALNLYVDIIQIFLSILQIM 299
           EEYIFAALN+YVDI+ IFL ILQ++
Sbjct: 192 EEYIFAALNIYVDIVNIFLYILQLI 216

Lifeguard (LFG) inhibits Fas-mediated apoptosis and interacts with the death receptor FasR/CD95/Apo1. LFG has been shown to interact with Bax and is supposed to be integral to cellular membranes such as the ER. A close homolog, PP1201 or RECS1, appears located in the Golgi compartment and also interacts with the Fas receptor CD95/Apo1. PP1201 is expressed in response to shear stress. Length = 217

>gnl|CDD|198411 cd10429, GAAP_like, Golgi antiapoptotic protein

 Score =  143 bits (362), Expect = 2e-41
 Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 80/288 (27%)

Query: 14  KESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLM 73
            E  +R AF+RKVYSIL VQL  TTA+ +LF  +P +K FV S+   F    + + +LL+
Sbjct: 22  AEPEIRMAFLRKVYSILSVQLLATTAVSALFYLSPSIKTFVQSHPWLFLISLIGSLILLI 81

Query: 74  AMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNI 133
           A+      R S+P+N + L LFT+ +  T+G + V F                       
Sbjct: 82  ALYWK---RHSHPVNLILLSLFTLCEAYTVG-LVVSF----------------------- 114

Query: 134 STNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAIT 193
                    +D + +L A+ +T  + + +T ++FQT  DF+                   
Sbjct: 115 ---------YDGKIVLQALILTLGVFVGLTAYTFQTKRDFSS------------------ 147

Query: 194 SLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFP-SKTLVFLMGCAGAVLF 252
                               +G  L I    + L +L+  FFP S T   +    GA+LF
Sbjct: 148 --------------------FGALLFILLWALILLALIFQFFPYSPTFELVYAGLGALLF 187

Query: 253 SLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS 300
           S Y++YDTQL+M       LSP+EYI AA++LY+DII +FLSIL+I++
Sbjct: 188 SGYIVYDTQLIM-----KRLSPDEYILAAISLYLDIINLFLSILRILA 230

GAAP (or transmembrane BAX inhibitor motif containing 4) is a regulator of apoptosis that is related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Human GAAP has been linked to the modulation of intracellular fluxes of Ca(2+), by suppressing influx from the extracellular medium and reducing release from intracellular stores. A viral homolog (vaccinia virus vGAAP) acts similar to its human counterpart in inhibiting apoptosis. Length = 233

>gnl|CDD|216251 pfam01027, Bax1-I, Inhibitor of apoptosis-promoting Bax1

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 75/280 (26%)

Query: 20  QAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQ 79
           + F+RKVY +L + L +T A+  L L  P L   +         + L   + +  +    
Sbjct: 1   RKFLRKVYGLLALGLLLTAAVAYLVLSTPALLQLLFPLFWVGLLLPLALLIFVFLLFSRI 60

Query: 80  DLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSV 139
             ++S       L LFT+++G+TLG +                                +
Sbjct: 61  K-KKSSSAALALLFLFTLLEGLTLGPI--------------------------------L 87

Query: 140 TVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLA 199
            V      IL A   T+ I   +++++  T  D +                         
Sbjct: 88  LVYTAGSIILQAFLGTAAIFGGLSLYALTTKRDLSF------------------------ 123

Query: 200 ITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYD 259
                          GGFL    + + + SLV IF PS  L   +   G ++FS  +LYD
Sbjct: 124 --------------LGGFLFAGLIGLIVASLVNIFLPSSALSLAISAIGVLIFSGLILYD 169

Query: 260 TQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIM 299
           TQ +     +   + + YI AAL+LY+D I +FL +L+I+
Sbjct: 170 TQRIK----EGGETDDYYILAALSLYLDFINLFLYLLRIL 205

Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. Length = 205

>gnl|CDD|198414 cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 175 GSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIF 234
             + +V+    I  A   T+     ++++ + T  D +  G FL +  + + + SLV IF
Sbjct: 84  SPILLVYTGASIAQAFFTTAATFGGLSLYGYTTKKDLSFLGSFLFMGLIGLIIASLVNIF 143

Query: 235 FPSKTLVFLMGCAGAVLFSLYLLYDTQ--LMMGGQHKYALSPEEYIFAALNLYVDIIQIF 292
             S  L F +   G ++FS  + YDTQ    M          ++ I  AL+LY+D I +F
Sbjct: 144 LQSSALQFAISAIGVLIFSGLIAYDTQRIKRMYEAGGGESGYKDAIMGALSLYLDFINLF 203

Query: 293 LSILQIM 299
           L +L++ 
Sbjct: 204 LFLLRLF 210

This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes. Length = 211

>gnl|CDD|198409 cd06181, BI-1-like, BAX inhibitor (BI)-1/YccA-like protein family

 Score = 76.7 bits (189), Expect = 9e-17
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLC 219
           + +  F+        G +   +    +L A+  T+L+   +T+++ Q   DF   GG L 
Sbjct: 66  ILLFGFTGLMGY-VVGPLLFFYGPTILLRALGGTALVFFGLTVYALQARKDFLFLGGPLM 124

Query: 220 IATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIF 279
                + L  L+  FF S  L  +    G VLF  +LLYDTQL++   HK  + PE+YI 
Sbjct: 125 AGLGFLLLSFLLNTFFYSPWLHLVAAAVGLVLFCGFLLYDTQLII---HKAEVGPEDYIN 181

Query: 280 AALNLYVDIIQIFLSILQIM 299
           A ++LY+DII IF+ +L I+
Sbjct: 182 ACISLYLDIINIFIRLLTIL 201

Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. This superfamily also contains the lifeguard(LFG)-like proteins and other subfamilies which appear to be related by common descent and also function as inhibitors of apoptosis. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes. Length = 202

>gnl|CDD|223742 COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]

 Score = 66.6 bits (163), Expect = 6e-13
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%)

Query: 186 ILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMG 245
           I  A  IT+L+  A++++ + T  D +  G FL +A + + + SLV IF  S  L   + 
Sbjct: 117 IAAAFGITALVFGALSLYGYTTKRDLSSLGSFLFMALIGLIIASLVNIFLGSSALHLAIS 176

Query: 246 CAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMST 301
             G ++FS  + YDTQ +     +        I  AL+LY+D I +FLS+L+I+  
Sbjct: 177 VLGVLIFSGLIAYDTQNI----KRMEGGERLAIMGALSLYLDFINLFLSLLRILGI 228

Length = 233

>gnl|CDD|198415 cd10433, YccA_like, YccA-like proteins

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 183 AEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVF 242
            + I+ A+  T+ I   ++ ++  T  DF+  GGFL +  +V+ L ++  IF     L  
Sbjct: 90  GQIIMTALGGTAAIFFGLSAYALTTKKDFSFLGGFLFVGAIVLLLAAVANIFLQIPALSL 149

Query: 243 LMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS 300
            +  A  +  S ++LYDT  ++ G          YI A ++LYV I  +F+S+L ++ 
Sbjct: 150 AISAAFVLFSSGFILYDTSRIIHGGET------NYIMATVSLYVSIYNLFVSLLNLLG 201

A prokaryotic member of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes. Length = 205

>gnl|CDD|198413 cd10431, GHITM, Growth-hormone inducible transmembrane protein

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 14/103 (13%)

Query: 211 FTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCA------GAVLFSLYLLYDTQLMM 264
           F   GG L I   V+F  SL  +F P  T     G        G VLF  +LLYDTQ ++
Sbjct: 161 FLYMGGPLAIGLGVVFASSLGSMFLPPTT-ALGAGLYSVSLYGGLVLFGGFLLYDTQKII 219

Query: 265 GGQH-----KYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ 302
             +       Y +   + I A++++Y+D I IF+ ++ I++  
Sbjct: 220 --KRAETHPLYGVRKYDPINASMSIYMDTINIFIRLVTILAGG 260

GHITM appears to be ubiquitiously expressed in mammalian cells and expression has also been observed in various cancer cell lines. A cytoprotective function has been suggested. It is closely related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect. Length = 264

>gnl|CDD|198412 cd10430, BI-1, BAX inhibitor (BI)-1

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 215 GGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSP 274
           GG L  A  ++ L SL  IF  SK L       G ++F  ++L+DTQ+++    K     
Sbjct: 127 GGLLSSALSILLLVSLANIFGGSKFLFQAELYLGLLVFCGFVLFDTQMII---EKAENGD 183

Query: 275 EEYIFAALNLYVDIIQIFLSILQIMSTQE 303
            +YI+ AL+L+VD + +F  +L I++ +E
Sbjct: 184 RDYIWHALDLFVDFVALFRRLLIILAKKE 212

Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. Length = 213

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	303
cd06181	212	BI-1-like BAX inhibitor (BI)-1 like protein family	100.0
PRK10447	219	HflBKC-binding inner membrane protein; Provisional	100.0
KOG2322|consensus	237		100.0
COG0670	233	Integral membrane protein, interacts with FtsH [Ge	100.0
PF01027	205	Bax1-I: Inhibitor of apoptosis-promoting Bax1; Int	100.0
KOG1629|consensus	235		99.92
KOG1630|consensus	336		99.81
PF12811	274	BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539	99.28
KOG2322|consensus	237		98.07
COG4760	276	Predicted membrane protein [Function unknown]	97.76
PRK10447	219	HflBKC-binding inner membrane protein; Provisional	96.67
cd06181	212	BI-1-like BAX inhibitor (BI)-1 like protein family	96.25
PF01027	205	Bax1-I: Inhibitor of apoptosis-promoting Bax1; Int	95.3

>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family

Probab=100.00  E-value=8.4e-39  Score=287.39  Aligned_cols=212  Identities=41%  Similarity=0.740  Sum_probs=191.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHHHHH
Q psy3073          18 VRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTI   97 (303)
Q Consensus        18 ~r~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~r~~p~n~~~l~~ft~   97 (303)
                      .|++|+||||+++++|+++|++.+......|+.++ ...+++..|+..++.+++.+.+.|.+..+|++|.|++++.+||.
T Consensus         1 ~~~~fl~kVY~~l~~~l~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ll~~ft~   79 (212)
T cd06181           1 IRRGFLRKVYGLLALQLLVTALVAYLGMFSPPLRN-VLSNTPLGWLLLLAFLGLVILLFCCRIKRRSSPANLILLFLFTA   79 (212)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence            37889999999999999999998888877777766 55666777877777888888888778889999999999999999


Q ss_pred             HHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHhhhccccccccccce
Q psy3073          98 VQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSV  177 (303)
Q Consensus        98 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~~~~~q~~~d~~~~~  177 (303)
                      .+|+++++++                                                                      
T Consensus        80 ~~g~~l~~~~----------------------------------------------------------------------   89 (212)
T cd06181          80 LMGVTLGPIL----------------------------------------------------------------------   89 (212)
T ss_pred             HHHHHHHHHH----------------------------------------------------------------------
Confidence            9999999984                                                                      


Q ss_pred             eeccChhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Q psy3073         178 TVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLL  257 (303)
Q Consensus       178 ~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~Dft~lg~~L~~~l~~Liv~~lv~iF~~~~~l~~iis~lgvvlFs~yii  257 (303)
                       ..+++..+.+|+.+|+++|++++++|+++|+|++++|+++++++.++++.+++++|++++..+.+++++|+++|++|++
T Consensus        90 -~~~~~~~i~~A~~~T~~if~~l~l~a~~tk~d~~~~g~~l~~~~~~l~~~~l~~~f~~~~~~~~~~~~~g~~lf~~~l~  168 (212)
T cd06181          90 -SVYTAASVLQAFGITAAVFGGLSLYALTTKRDFSFLGGFLFMGLIVLIVASLVNIFLQSPALQLAISALGVLLFSGYIL  168 (212)
T ss_pred             -HHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHhHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence             2345667899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3073         258 YDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ  302 (303)
Q Consensus       258 yDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg~~  302 (303)
                      ||||++++++ +.+.++|||+.||+++|+|++|+|+++||++|++
T Consensus       169 ~Dtq~i~~~~-~~~~~~~d~i~~al~LylDiinlF~~iL~il~~~  212 (212)
T cd06181         169 YDTQLIIGGY-RLYLSPDDYILAALSLYLDIINLFLSLLRILGSR  212 (212)
T ss_pred             HHHHHHHHhh-hhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999998865 3346899999999999999999999999999875

Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.

>PRK10447 HflBKC-binding inner membrane protein; Provisional

Probab=100.00  E-value=2.6e-38  Score=287.63  Aligned_cols=206  Identities=19%  Similarity=0.257  Sum_probs=171.8

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhccchhHHHHH
Q psy3073          13 FKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFL   92 (303)
Q Consensus        13 ~~~~~~r~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~r~~p~n~~~l   92 (303)
                      -++...+++++||||.+++++++.++++..+....+.       +.+..+...+..+++.+..    ..+|++|.|++++
T Consensus        11 ~~~~~~~~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~-------~~~~~~~~~~~~~gl~~~~----~~~~~~~~~~~ll   79 (219)
T PRK10447         11 RTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML-------PSPGLILTLVGMYGLMFLT----YKTANKPTGILSA   79 (219)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------chhHHHHHHHHHHHHHHHH----HHHHcCCHHHHHH
Confidence            3334458889999999999999999987766542111       1111234445555555543    3468999999999


Q ss_pred             HHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHhhhccccccc
Q psy3073          93 MLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVD  172 (303)
Q Consensus        93 ~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~~~~~q~~~d  172 (303)
                      ..||.++|+++||++.+|                                                              
T Consensus        80 f~fT~~~G~~lg~i~~~y--------------------------------------------------------------   97 (219)
T PRK10447         80 FAFTGFLGYILGPILNTY--------------------------------------------------------------   97 (219)
T ss_pred             HHHHHHHHHHHHHHHHHH--------------------------------------------------------------
Confidence            999999999999995210                                                              


Q ss_pred             cccceeeccChhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Q psy3073         173 FTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLF  252 (303)
Q Consensus       173 ~~~~~~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~Dft~lg~~L~~~l~~Liv~~lv~iF~~~~~l~~iis~lgvvlF  252 (303)
                           ....+|++|.+|+++|+++|++++++|++||||++++|++++.+++++++++++++|++++..+.+++++|+++|
T Consensus        98 -----~~~~~~~iV~~A~~~Ta~iF~~ls~~a~~tk~Dfs~lg~~L~~~l~~li~~~l~~~F~~s~~~~~~~s~~g~llf  172 (219)
T PRK10447         98 -----LSAGMGDVIALALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILIS  172 (219)
T ss_pred             -----HhcCCccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence                 012357899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3073         253 SLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ  302 (303)
Q Consensus       253 s~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg~~  302 (303)
                      ++|++||||+|++|      ++|||+.||++||+|++|+|+++|||+|++
T Consensus       173 sgyilyDTq~Ii~~------g~~dyi~aAl~LYlDiinlFl~lL~il~~~  216 (219)
T PRK10447        173 SGAILFETSNIIHG------GETNYIRATVSLYVSLYNIFVSLLSILGFA  216 (219)
T ss_pred             HHHHHHHHHHHHcC------CchHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            99999999999853      479999999999999999999999999964

>KOG2322|consensus

Probab=100.00  E-value=3e-39  Score=292.92  Aligned_cols=202  Identities=43%  Similarity=0.769  Sum_probs=176.3

Q ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhccchhHH
Q psy3073          10 RSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNY   89 (303)
Q Consensus        10 ~~~~~~~~~r~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~r~~p~n~   89 (303)
                      ...+.|+++|++|+||||+++..|+++|++.++.+...++.++|+.+|+|.+|.+.++.+++.+.+.|+.+.|||+|.|+
T Consensus        35 ~~~~~~~~iR~~FiRKVYsIl~~QLl~T~~~~~~~~~~~~~~~~v~~~~~~~~~~~~vf~vt~l~l~c~~~~r~k~P~N~  114 (237)
T KOG2322|consen   35 PGAFCDQSIRWGFIRKVYSILSIQLLITLAVVAIFTVHEPVQDFVRRNPALYWALIVVFIVTYLSLACCEGLRRKSPVNL  114 (237)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHheeEEEEccHHHHHHHhCcHHHHHHHHHHHHHHHHHHccCcccccCcHHH
Confidence            33788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHhhhcccc
Q psy3073          90 VFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQT  169 (303)
Q Consensus        90 ~~l~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~~~~~q~  169 (303)
                      +++.+||.+++.+.|..+                                 -+||..+||.|++||.+||+++++|+.||
T Consensus       115 ilL~iFT~a~s~~~g~~~---------------------------------a~~~~~~VL~Al~IT~~V~~slt~~t~qt  161 (237)
T KOG2322|consen  115 ILLGIFTLAEAFMTGLVT---------------------------------AFYDAKVVLLALIITTVVVLSLTLFTLQT  161 (237)
T ss_pred             hHHHHHHHHHHHHHHHHH---------------------------------HHHhhHHHHHHHHHHHhheeeEEEEEEee
Confidence            999999999999999873                                 46777777777777777777777777665


Q ss_pred             ccccccceeeccChhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH-HHHHHcChhHHHHHHHHHH
Q psy3073         170 SVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFS-LVVIFFPSKTLVFLMGCAG  248 (303)
Q Consensus       170 ~~d~~~~~~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~Dft~lg~~L~~~l~~Liv~~-lv~iF~~~~~l~~iis~lg  248 (303)
                      |+||                                      +..|+.++..++++++++ +..+|...+.++.+++.+|
T Consensus       162 K~DF--------------------------------------t~~~~~l~~~l~vl~~~g~I~~~f~~~~~~~~vya~lg  203 (237)
T KOG2322|consen  162 KYDF--------------------------------------TSLGGFLFALLIVLLLFGLIFLFFPYGPILVMVYAALG  203 (237)
T ss_pred             ccch--------------------------------------hhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5555                                      555666777777777777 4444557899999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHH
Q psy3073         249 AVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVD  287 (303)
Q Consensus       249 vvlFs~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLD  287 (303)
                      +++|++|++||||++++     +.+|||||.||+++|+|
T Consensus       204 Allf~~yl~~Dtqllm~-----~~SPEEYI~aA~~lYlD  237 (237)
T KOG2322|consen  204 ALLFCGYLVYDTQLLMG-----RISPEEYIFAALNLYLD  237 (237)
T ss_pred             HHHHhHHHHhhhHHHhc-----cCCHHHHHHHHHHhhcC
Confidence            99999999999999986     56899999999999998

>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]

Probab=100.00  E-value=2.5e-35  Score=270.43  Aligned_cols=229  Identities=26%  Similarity=0.414  Sum_probs=188.4

Q ss_pred             CCCccccCCCC-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Q psy3073           1 MMNYESLMGRS-DFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQ   79 (303)
Q Consensus         1 ~~~~~~~~~~~-~~~~~~~r~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~   79 (303)
                      |.+++++..+. ++++++.|++|++|||.+++.++++|++.++...+.+...... .++++.++..+..+...+...  +
T Consensus         1 m~~~~~~~~~~~~~~~~~~~~~f~~~vY~~~~~~L~~t~~~a~~~~~~~~~~~~~-~~~~~~~vl~~a~l~~~~~~~--~   77 (233)
T COG0670           1 MNMFDRSYSRIQAFKSDLGLNTFLRKVYLLLALGLLVTAVGAALAAYLLFNLGLL-SLSPPGFVLIIAGLAGVFFLS--R   77 (233)
T ss_pred             CCcchhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccHHHHHHHHHHHHHHHHH--H
Confidence            44455555544 4555588999999999999999999988766654433322211 445666776776667666653  5


Q ss_pred             hhhccchhHHHHHHHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHH
Q psy3073          80 DLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLIC  159 (303)
Q Consensus        80 ~~~r~~p~n~~~l~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~  159 (303)
                      +.+|+.|.+...+..||..+|++++++..                                 .|                
T Consensus        78 ~~~~s~~~~~~~~~~~t~l~G~tL~~i~~---------------------------------~Y----------------  108 (233)
T COG0670          78 KINKSSPTALILFFVYTALVGLTLSPILL---------------------------------VY----------------  108 (233)
T ss_pred             HhccCcchHHHHHHHHHHHHHHHHHHHHH---------------------------------HH----------------
Confidence            66679999999999999999999999941                                 11                


Q ss_pred             hHHhhhccccccccccceeeccChhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHcChhH
Q psy3073         160 LAITIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKT  239 (303)
Q Consensus       160 ~~~~~~~~q~~~d~~~~~~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~Dft~lg~~L~~~l~~Liv~~lv~iF~~~~~  239 (303)
                                        ....++..+.+|+..|+++|+++++|++++|+|++++|+.++++++++++++++|+|+++|.
T Consensus       109 ------------------~~~~~~~~i~~af~~t~~~F~~ls~~g~~tk~Dls~l~~~l~~aligLiiasvvn~Fl~s~~  170 (233)
T COG0670         109 ------------------AAISGGDAIAAAFGITALVFGALSLYGYTTKRDLSSLGSFLFMALIGLIIASLVNIFLGSSA  170 (233)
T ss_pred             ------------------HhcccccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence                              12223367999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhh---cCC
Q psy3073         240 LVFLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMS---TQE  303 (303)
Q Consensus       240 l~~iis~lgvvlFs~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg---~~~  303 (303)
                      ++.++|.+|+++|+++++||||+|++.    +.+++.++.+|++||+|++|+|+++||++|   +||
T Consensus       171 l~~~IS~lgvlifsgli~yDtq~I~~~----~~~~~~~i~~AlsLYldfiNlF~~LL~i~g~~~~r~  233 (233)
T COG0670         171 LHLAISVLGVLIFSGLIAYDTQNIKRM----EGGERLAIMGALSLYLDFINLFLSLLRILGILSNRR  233 (233)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH----hccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            999999999999999999999999762    456899999999999999999999999998   665

>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []

Probab=100.00  E-value=1.5e-31  Score=237.04  Aligned_cols=202  Identities=41%  Similarity=0.778  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhccchhH--HHHHHHHHH
Q psy3073          20 QAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLN--YVFLMLFTI   97 (303)
Q Consensus        20 ~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~r~~p~n--~~~l~~ft~   97 (303)
                      |+|+||||++++.|+.+|++........|   .+...+++..|.+.++.+++.+...+.++.+|++|.|  +..+..||.
T Consensus         1 ~~fl~kvy~~l~~~l~it~~~~~~~~~~~---~~~~~~~~~~~~~~i~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~t~   77 (205)
T PF01027_consen    1 RQFLRKVYGLLALQLAITALGAFLVLASP---LFLSQHFPLSWVSLIVSLVLLIFLYILFNRRRRFPSNVALILLFIFTL   77 (205)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            46899999999999999966555444444   3444556777777777777775555555455555555  999999999


Q ss_pred             HHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHhhhccccccccccce
Q psy3073          98 VQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTGSV  177 (303)
Q Consensus        98 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~~~~~q~~~d~~~~~  177 (303)
                      .+|..++++.                                                                      
T Consensus        78 ~~g~~~~~i~----------------------------------------------------------------------   87 (205)
T PF01027_consen   78 LEGLLLGPIS----------------------------------------------------------------------   87 (205)
T ss_pred             HHHHHHHHHH----------------------------------------------------------------------
Confidence            9999999883                                                                      


Q ss_pred             eeccChhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Q psy3073         178 TVVFDAEQILYAVAITSLICLAITIFSFQTSVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLVFLMGCAGAVLFSLYLL  257 (303)
Q Consensus       178 ~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~Dft~lg~~L~~~l~~Liv~~lv~iF~~~~~l~~iis~lgvvlFs~yii  257 (303)
                       ..++++++.+|+..|+++|+++++++.++|+|++.+++++..++.++++++++++|++++..+.+++++|+++|+++++
T Consensus        88 -~~~~~~~v~~a~~~T~~if~~l~~~a~~~~~d~~~~~~~l~~~l~~l~i~~l~~~f~~~~~~~~~is~~~~~lf~~~l~  166 (205)
T PF01027_consen   88 -SFYDPSIVLQAFLLTAAIFIALTLYAFFTKRDFTRWGGILFIGLIGLIIFGLVSIFLPSSPLYLLISYIGILLFSLYLV  166 (205)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence             2345888999999999999999999999999999999999999999999999999999989999999999999999999


Q ss_pred             HHHHHHhccccccCCCchHH-HHHHHHHHHHHHHHHHHHHHHh
Q psy3073         258 YDTQLMMGGQHKYALSPEEY-IFAALNLYVDIIQIFLSILQIM  299 (303)
Q Consensus       258 yDtQ~Ii~g~~~~~~~~ddy-I~aAL~LYLDiINLFl~IL~IL  299 (303)
                      ||||++++    ++.++||+ +.+|+++|+|++|+|+++||++
T Consensus       167 ~Dt~~i~~----~~~~~~~~~i~~Al~Ly~d~i~lF~~iL~ll  205 (205)
T PF01027_consen  167 YDTQRIIR----RYFSPDDYAIIAALSLYLDIINLFLRILRLL  205 (205)
T ss_pred             HHHHHHHH----HHccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99999964    22346666 9999999999999999999985

Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].

>KOG1629|consensus

Probab=99.92  E-value=8.7e-24  Score=187.49  Aligned_cols=214  Identities=20%  Similarity=0.305  Sum_probs=173.0

Q ss_pred             CccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q psy3073           3 NYESLMGRSDFKESSVRQAFVRKVYSILMVQLAITTAIISLFLFNPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLR   82 (303)
Q Consensus         3 ~~~~~~~~~~~~~~~~r~~f~rkvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~   82 (303)
                      |||..++. +--+|.+|++ ++|||..++..+..++.+..+     +.++    | ....++.+..+++++.+.|.+.  
T Consensus         9 ~fd~l~n~-~~~sP~vq~H-LkkvY~tl~~~~~asA~GAyl-----hM~~----n-igG~lsalg~l~~miwl~~~py--   74 (235)
T KOG1629|consen    9 SFDALLNF-SHISPAVQNH-LKKVYLTLALALFASAAGAYL-----HMVW----N-IGGLLSALGSLGLMIWLMFTPY--   74 (235)
T ss_pred             hHHHHhcc-ccCCHHHHHH-HHHHHHHHHHHHHHHHhhhHH-----Hhhh----h-ccchHHHHHHHHHHHHHhCCCC--
Confidence            45556653 3445777765 999999999998887765332     2221    1 1123555666677777655322  


Q ss_pred             ccchhHHHHHHHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHH
Q psy3073          83 RSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAI  162 (303)
Q Consensus        83 r~~p~n~~~l~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~  162 (303)
                       ++..++-++.+|+++.|-++||.+..                                                     
T Consensus        75 -~hk~rl~lL~~fa~l~GasvGP~i~~-----------------------------------------------------  100 (235)
T KOG1629|consen   75 -EHKTRLGLLFLFAFLTGASVGPLIKF-----------------------------------------------------  100 (235)
T ss_pred             -ccchhHHHHHHHHHHcCCcccchhhh-----------------------------------------------------
Confidence             23348889999999999999999521                                                     


Q ss_pred             hhhccccccccccceeeccChhHHHHHHHHHHHHHHHHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHHHHcChhHHH
Q psy3073         163 TIFSFQTSVDFTGSVTVVFDAEQILYAVAITSLICLAITIFSFQT-SVDFTVWGGFLCIATLVMFLFSLVVIFFPSKTLV  241 (303)
Q Consensus       163 ~~~~~q~~~d~~~~~~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~t-k~Dft~lg~~L~~~l~~Liv~~lv~iF~~~~~l~  241 (303)
                                     +.-.+|+++.+|+.+|+++|.|+++.|... +|+..++|+.|..++..+...++.+.++++.+..
T Consensus       101 ---------------~ididpsIliTAf~GTav~F~cfSasAmlArrreYLylGg~L~s~~s~l~wl~l~n~~fgS~~v~  165 (235)
T KOG1629|consen  101 ---------------CIDIDPSILITAFVGTAVIFVCFSASAMLARRREYLYLGGLLSSGLSLLLWLSLANSFFGSIWVF  165 (235)
T ss_pred             ---------------eeccChHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence                           456799999999999999999999999775 6889999999999999999999999999988888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3073         242 FLMGCAGAVLFSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMSTQ  302 (303)
Q Consensus       242 ~iis~lgvvlFs~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg~~  302 (303)
                      ..-.++|+++|++|+++|||.|++   +.+.++.||+.||+.+|.|++.+|.++|.|+-.+
T Consensus       166 ~~qLY~Gllvfvg~ivvdTQ~IiE---Kah~GdmDyv~Hsl~lf~dfvsvF~riLiIl~~~  223 (235)
T KOG1629|consen  166 KFQLYVGLLVFVGFIVVDTQEIIE---KAHHGDMDYVQHSLDLFTDFVSVFRRILIILAMN  223 (235)
T ss_pred             HHHHHHHHHHhheeEEeeHHHHHH---HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            889999999999999999999997   5667899999999999999999999999998753

>KOG1630|consensus

Probab=99.81  E-value=3.4e-19  Score=163.57  Aligned_cols=212  Identities=23%  Similarity=0.295  Sum_probs=167.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHH
Q psy3073          16 SSVRQAFVRKVYSILMVQLAITTAIISLFLF-NPDLKMFVVSNMGFFWFMNLLAFVLLMAMACFQDLRRSYPLNYVFLML   94 (303)
Q Consensus        16 ~~~r~~f~rkvy~~l~~~l~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~r~~p~n~~~l~~   94 (303)
                      ..+|.+ +..+|.+++.++.+|++- +.+.+ ++.+.++..+..|...+..+...+..-.++.+-+.+..+..+...+.+
T Consensus       109 qyVrdR-I~sTYay~~gS~~lTA~s-avA~~rs~~lm~l~~rgg~va~~~tla~mi~sG~larsi~Yq~g~gaKhLAW~l  186 (336)
T KOG1630|consen  109 QYVRDR-IHSTYAYLAGSCGLTAAS-AVAISRSPALMNLMMRGGWVAIGVTLAAMIGSGMLARSIEYQPGPGAKHLAWLL  186 (336)
T ss_pred             HHHHHH-HHHHHHHHhccHHHHHHH-HHHHhccHHHHHHHhcCchHHHHHHHHHHHhcchhhhcccCCCCccHHHHHHHH
Confidence            467777 889999999999999864 44444 566677776665544433333333333344333444445578999999


Q ss_pred             HHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHhhhccccccccc
Q psy3073          95 FTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAITIFSFQTSVDFT  174 (303)
Q Consensus        95 ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~~~~~q~~~d~~  174 (303)
                      .....|-+++|+|                                                                   
T Consensus       187 Hc~vlGAV~APlc-------------------------------------------------------------------  199 (336)
T KOG1630|consen  187 HCGVLGAVVAPLC-------------------------------------------------------------------  199 (336)
T ss_pred             HHHHHHHHHhhHH-------------------------------------------------------------------
Confidence            9999999999995                                                                   


Q ss_pred             cceeeccChhHHHHHHHHHHHHHHHHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHHHHcCh-----hHHHHHHHHHH
Q psy3073         175 GSVTVVFDAEQILYAVAITSLICLAITIFSFQTSV-DFTVWGGFLCIATLVMFLFSLVVIFFPS-----KTLVFLMGCAG  248 (303)
Q Consensus       175 ~~~~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk~-Dft~lg~~L~~~l~~Liv~~lv~iF~~~-----~~l~~iis~lg  248 (303)
                           ..+..+...|...|++|+++++..|...+. .|..+|+.|.+++.++++.++.++|++.     ..+..+..+.|
T Consensus       200 -----~lgGPiLtrAa~YTaGIVGgLStvA~cAPSeKFL~MggPLaiGlGvVFvssl~sm~LPPtta~GA~LaSmslYGG  274 (336)
T KOG1630|consen  200 -----FLGGPILTRAAWYTAGIVGGLSTVAACAPSEKFLNMGGPLAIGLGVVFVSSLGSMFLPPTTALGAGLASMSLYGG  274 (336)
T ss_pred             -----hcccHHHHHHHHHHccccchhhhhhhcCcHHHHhhcCCCceeeeeeEehhhhhhhhcCCchhhhhhhHHHHHhcc
Confidence                 235678899999999999999999988875 5889999999999999999999999873     24678889999


Q ss_pred             HHHHHHHHHHHHHHHhccccccC----CCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3073         249 AVLFSLYLLYDTQLMMGGQHKYA----LSPEEYIFAALNLYVDIIQIFLSILQIMST  301 (303)
Q Consensus       249 vvlFs~yiiyDtQ~Ii~g~~~~~----~~~ddyI~aAL~LYLDiINLFl~IL~ILg~  301 (303)
                      +++|++|++||||++.+..++|.    ...-|+|-+++++|+|..|+|+|+..|+|+
T Consensus       275 LiLFS~FLLYDTQr~vk~ae~ypq~s~~~~~dPin~~msiymdvlnifiriv~il~g  331 (336)
T KOG1630|consen  275 LILFSGFLLYDTQRVVKSAEKYPQYSEFPNYDPINACMSIYMDVLNIFIRIVMILGG  331 (336)
T ss_pred             HHHHHHHHHHhHHHHHHHHHhCcchhccCCCCchHHHHHHHHHHHHHHHHHHhhhcC
Confidence            99999999999999986554553    234689999999999999999999999985

>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human

Probab=99.28  E-value=1.2e-09  Score=102.90  Aligned_cols=118  Identities=21%  Similarity=0.237  Sum_probs=97.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHHHHc--------ChhHHHHHHHHHHHHH
Q psy3073         182 DAEQILYAVAITSLICLAITIFSFQTS--VDFTVWGGFLCIATLVMFLFSLVVIFF--------PSKTLVFLMGCAGAVL  251 (303)
Q Consensus       182 ~~~~I~~A~~~Ta~ifi~Lsl~a~~tk--~Dft~lg~~L~~~l~~Liv~~lv~iF~--------~~~~l~~iis~lgvvl  251 (303)
                      -|+++.+|...|.++|++|.+ .++++  |--.++.++...+..+..++.++++.+        .+.++.+.+|.+++++
T Consensus       143 ~pGIv~qAvl~T~~vf~~ml~-lYk~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~l~~~gplgI~~slv~v~i  221 (274)
T PF12811_consen  143 YPGIVFQAVLGTFGVFAVMLA-LYKTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGSLRDGGPLGIGFSLVVVGI  221 (274)
T ss_pred             CCcHHHHHHHHHHHHHHHHHH-HHHhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHH
Confidence            378999999999999998864 55554  333477888888887777777777522        1356789999999999


Q ss_pred             HHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3073         252 FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMST  301 (303)
Q Consensus       252 Fs~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg~  301 (303)
                      =+..++.|.+.+.+|- +++.+++..+.+|++|=..++++|+++||+|+.
T Consensus       222 Aa~sLllDFd~Ie~~v-~~gaPk~~eW~~AfGL~vTLVWLYlEILRLL~~  270 (274)
T PF12811_consen  222 AALSLLLDFDFIEQGV-RQGAPKKMEWYAAFGLLVTLVWLYLEILRLLSK  270 (274)
T ss_pred             HHHHHHhhHHHHHHHH-HcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998775 677778888999999999999999999999984

Some members of BI1 family have been proved to play important roles in cell death [, ].

>KOG2322|consensus

Probab=98.07  E-value=2.1e-06  Score=79.01  Aligned_cols=31  Identities=39%  Similarity=0.720  Sum_probs=28.3

Q ss_pred             eeccChhHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3073         178 TVVFDAEQILYAVAITSLICLAITIFSFQTS  208 (303)
Q Consensus       178 ~~~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk  208 (303)
                      ...+++.+|++|+.+|+++++++++|+.++|
T Consensus       132 ~a~~~~~~VL~Al~IT~~V~~slt~~t~qtK  162 (237)
T KOG2322|consen  132 TAFYDAKVVLLALIITTVVVLSLTLFTLQTK  162 (237)
T ss_pred             HHHHhhHHHHHHHHHHHhheeeEEEEEEeec
Confidence            5678899999999999999999999999885

>COG4760 Predicted membrane protein [Function unknown]

Probab=97.76  E-value=0.0024  Score=58.34  Aligned_cols=118  Identities=19%  Similarity=0.169  Sum_probs=74.1

Q ss_pred             ccChhHHHHHHHHHHHHHHHHHHHHHhcc--ccccchhHHHHHHHHH---HHHHHHHH-HHcC--hh------HHHHHHH
Q psy3073         180 VFDAEQILYAVAITSLICLAITIFSFQTS--VDFTVWGGFLCIATLV---MFLFSLVV-IFFP--SK------TLVFLMG  245 (303)
Q Consensus       180 ~~~~~~I~~A~~~Ta~ifi~Lsl~a~~tk--~Dft~lg~~L~~~l~~---Liv~~lv~-iF~~--~~------~l~~iis  245 (303)
                      ......|.+|...|.++|.+|. ..++|.  |--.+....+..+..+   +++..++. +|.+  .|      ...+++|
T Consensus       139 anaGgligqAvLgT~Gvf~gML-~vYktGaIkvTpkF~r~v~a~~~Gvl~L~Lgn~vla~F~Gg~~pllr~gG~~~IiFS  217 (276)
T COG4760         139 ANAGGLIGQAVLGTFGVFFGML-VVYKTGAIKVTPKFTRMVVAATFGVLVLMLGNFVLAMFVGGGIPLLRSGGPFGIIFS  217 (276)
T ss_pred             ccccceeHHHHHHHHHHHHHHH-HHHhcCceeecchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceEeeHH
Confidence            3345688999999999999995 566663  2223444444444444   33333333 2322  22      2345666


Q ss_pred             HHHHHH--HHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3073         246 CAGAVL--FSLYLLYDTQLMMGGQHKYALSPEEYIFAALNLYVDIIQIFLSILQIMST  301 (303)
Q Consensus       246 ~lgvvl--Fs~yiiyDtQ~Ii~g~~~~~~~~ddyI~aAL~LYLDiINLFl~IL~ILg~  301 (303)
                      ..++.+  |+..+-+|  .+-++- +....++..+..|++|-...+++|+++||+++.
T Consensus       218 LfcigiAAf~fllDFD--aad~~v-r~GAP~kmaWgvAlGL~VTLVWLY~EiLRLLSy  272 (276)
T COG4760         218 LFCIGIAAFSFLLDFD--AADQMV-RAGAPEKMAWGVALGLTVTLVWLYLEILRLLSY  272 (276)
T ss_pred             HHHHHHHHHHHHhhhh--HHHHHH-HcCChhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            555544  55555555  433322 334456778999999999999999999999983

>PRK10447 HflBKC-binding inner membrane protein; Provisional

Probab=96.67  E-value=0.023  Score=52.26  Aligned_cols=36  Identities=17%  Similarity=0.224  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHhHHhhhccccccccccceeecc
Q psy3073         146 EQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVF  181 (303)
Q Consensus       146 ~~vl~a~~it~~~~~~~~~~~~q~~~d~~~~~~~~~  181 (303)
                      ++|+.|+++|++++.++++++.|||+||+.|++..+
T Consensus       104 ~iV~~A~~~Ta~iF~~ls~~a~~tk~Dfs~lg~~L~  139 (219)
T PRK10447        104 DVIALALGGTALVFFCCSAYVLTTRKDMSFLGGMLM  139 (219)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            467899999999999999999999999999986665

>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family

Probab=96.25  E-value=0.29  Score=43.91  Aligned_cols=81  Identities=20%  Similarity=0.255  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhHHHHHHHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhh
Q psy3073          64 MNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVF  143 (303)
Q Consensus        64 ~~~l~~~~~~~l~~~~~~~r~~p~n~~~l~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (303)
                      .++..+.+...-...++.+.+.+.=...-...+...|......                                     
T Consensus        50 ~l~~~~~l~~~~~~~~~~~~~~~ll~~ft~~~g~~l~~~~~~~-------------------------------------   92 (212)
T cd06181          50 FLGLVILLFCCRIKRRSSPANLILLFLFTALMGVTLGPILSVY-------------------------------------   92 (212)
T ss_pred             HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------
Confidence            3333333333233344555566765555566677777777666                                     


Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhccccccccccceeecc
Q psy3073         144 DAEQILYAVAITSLICLAITIFSFQTSVDFTGSVTVVF  181 (303)
Q Consensus       144 ~~~~vl~a~~it~~~~~~~~~~~~q~~~d~~~~~~~~~  181 (303)
                      +.+.++.|.++|.++..++++++.|||.|++.+++..+
T Consensus        93 ~~~~i~~A~~~T~~if~~l~l~a~~tk~d~~~~g~~l~  130 (212)
T cd06181          93 TAASVLQAFGITAAVFGGLSLYALTTKRDFSFLGGFLF  130 (212)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccccHHhHHHHHH
Confidence            12347899999999999999999999999988765443

Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.

>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []

Probab=95.30  E-value=0.2  Score=44.22  Aligned_cols=60  Identities=27%  Similarity=0.386  Sum_probs=49.0

Q ss_pred             cchhHHHHHHHHHHHHHhHhhccccccccchhhhhhhhccccchhhhhccccCCccchhhhHHHHHHHHHHHHHHHhHHh
Q psy3073          84 SYPLNYVFLMLFTIVQGITLGSVTVVFPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAEQILYAVAITSLICLAIT  163 (303)
Q Consensus        84 ~~p~n~~~l~~ft~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~a~~it~~~~~~~~  163 (303)
                      +.+.-...-...+...|......                                     |.+++++|.++|.+++++++
T Consensus        68 ~~~~~~~~t~~~g~~~~~i~~~~-------------------------------------~~~~v~~a~~~T~~if~~l~  110 (205)
T PF01027_consen   68 ALILLFIFTLLEGLLLGPISSFY-------------------------------------DPSIVLQAFLLTAAIFIALT  110 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence            36666666677777777777777                                     25678999999999999999


Q ss_pred             hhccccccccccceeec
Q psy3073         164 IFSFQTSVDFTGSVTVV  180 (303)
Q Consensus       164 ~~~~q~~~d~~~~~~~~  180 (303)
                      +++.|+|.|+++|+...
T Consensus       111 ~~a~~~~~d~~~~~~~l  127 (205)
T PF01027_consen  111 LYAFFTKRDFTRWGGIL  127 (205)
T ss_pred             HHHHHHhhhhcccchHH
Confidence            99999999999886444

Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	303
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 35/278 (12%), Positives = 88/278 (31%), Gaps = 61/278 (21%)

Query: 54  VVSNMGF--FW--FMNLLAFVLLMAMACFQDLRRSYPLNYVFLMLFTIVQGITLGSVTVV 109
           V   M F  FW    N  +   ++ M   Q L      N+      +    + + S+   
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEM--LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ-- 231

Query: 110 FPFKADFILKKDKFRGVMGIIMNISTNSSVTVVFDAE-QILYAVAITSLICLAITIFSFQ 168
                  +  K     ++ +++N+  N+     F+   +IL     T    +   + +  
Sbjct: 232 -AELRRLLKSKPYENCLL-VLLNVQ-NAKAWNAFNLSCKIL---LTTRFKQVTDFLSAAT 285

Query: 169 TSVDFTGSVTVVFDAEQILYAVA------ITSL---IC----LAITIFSFQTSVDFTVWG 215
           T+       ++    +++   +          L   +       ++I +         W 
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345

Query: 216 GF-------------LCIATL----VMFLFSLVVIF-----FPSKTLVFLMGCAGAVLFS 253
            +               +  L       +F  + +F      P+  L         +++ 
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS--------LIWF 397

Query: 254 LYLLYDTQLMMGGQHKYAL---SPEEYIFAALNLYVDI 288
             +  D  +++   HKY+L    P+E   +  ++Y+++
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00