Psyllid ID: psy3385


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER
cHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccHHHHHHccHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHccHHHHHHHHHHHHHHHcccccHccccccHHHcccccHHHHHHHHHHHHHHHHcc
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVaerpvpehtltldederadtpwwkckKWALHILSRIFER
mvlkiveqsseRVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAerpvpehtltldederadtpwwkckKWALHILSRIFER
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER
**********ERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIF**
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPV***********RADTPWWKCKKWALHILSRIFER
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVLKIVEQSSERVMFVLIAFVLIRVQRAFDYDLIITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query99 2.2.26 [Sep-21-2011]
O95373 1038 Importin-7 OS=Homo sapien yes N/A 0.565 0.053 0.535 5e-14
Q9EPL8 1038 Importin-7 OS=Mus musculu yes N/A 0.565 0.053 0.535 6e-14
Q7TMY7 1010 Importin-8 OS=Mus musculu no N/A 0.565 0.055 0.535 8e-14
O15397 1037 Importin-8 OS=Homo sapien no N/A 0.565 0.054 0.535 8e-14
P46970 1048 Nonsense-mediated mRNA de yes N/A 0.525 0.049 0.415 2e-06
O59809 1029 Probable importin c550.11 yes N/A 0.565 0.054 0.339 5e-06
>sp|O95373|IPO7_HUMAN Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1 Back     alignment and function desciption
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 43/56 (76%)

Query: 44  VISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER 99
           +I+++   +W+EI + V  R VP  TL ++ED+R + PWWKCKKWALHIL+R+FER
Sbjct: 219 LINQQNLTEWIEILKTVVNRDVPNETLQVEEDDRPELPWWKCKKWALHILARLFER 274




Functions in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with the importin-beta subunit KPNB1. Acting autonomously, is thought to serve itself as receptor for nuclear localization signals (NLS) and to promote translocation of import substrates through the nuclear pore complex (NPC) by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Mediates autonomously the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In association with KPNB1 mediates the nuclear import of H1 histone and the Ran-binding site of IPO7 is not required but synergizes with that of KPNB1 in importin/substrate complex dissociation. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In vitro, mediates the nuclear import of HIV-1 reverse transcription complex (RTC) integrase. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev.
Homo sapiens (taxid: 9606)
>sp|Q9EPL8|IPO7_MOUSE Importin-7 OS=Mus musculus GN=Ipo7 PE=1 SV=2 Back     alignment and function description
>sp|Q7TMY7|IPO8_MOUSE Importin-8 OS=Mus musculus GN=Ipo8 PE=2 SV=3 Back     alignment and function description
>sp|O15397|IPO8_HUMAN Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2 Back     alignment and function description
>sp|P46970|NMD5_YEAST Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2 Back     alignment and function description
>sp|O59809|IMA3_SCHPO Probable importin c550.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query99
260826444 1346 hypothetical protein BRAFLDRAFT_125867 [ 0.565 0.041 0.642 1e-19
307214125 1062 Importin-7 [Harpegnathos saltator] 0.565 0.052 0.724 7e-18
91078256 1044 PREDICTED: similar to importin-7 [Tribol 0.565 0.053 0.714 1e-17
357622657 967 importin-7 [Danaus plexippus] 0.575 0.058 0.631 4e-17
307186404 1062 Importin-7 [Camponotus floridanus] 0.565 0.052 0.672 4e-17
345496691 603 PREDICTED: importin-7-like, partial [Nas 0.565 0.092 0.689 4e-17
380026689 1057 PREDICTED: importin-7 [Apis florea] 0.565 0.052 0.689 4e-17
110767987 1028 PREDICTED: importin-7-like, partial [Api 0.565 0.054 0.689 4e-17
340708547 1057 PREDICTED: importin-7-like [Bombus terre 0.565 0.052 0.689 5e-17
350412904 1057 PREDICTED: importin-7-like [Bombus impat 0.565 0.052 0.689 5e-17
>gi|260826444|ref|XP_002608175.1| hypothetical protein BRAFLDRAFT_125867 [Branchiostoma floridae] gi|229293526|gb|EEN64185.1| hypothetical protein BRAFLDRAFT_125867 [Branchiostoma floridae] Back     alignment and taxonomy information
 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/56 (64%), Positives = 47/56 (83%)

Query: 44  VISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER 99
           +++R +F QWME  +Q+ ERP+PE TL +DEDER D PWWKCKKWA+HIL+R+FER
Sbjct: 219 LVTRPIFQQWMEALKQIMERPIPEQTLQIDEDERPDLPWWKCKKWAMHILARVFER 274




Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Order:

Class:

Phylum: Chordata

Superkingdom: Eukaryota

>gi|307214125|gb|EFN89289.1| Importin-7 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91078256|ref|XP_970842.1| PREDICTED: similar to importin-7 [Tribolium castaneum] gi|270003922|gb|EFA00370.1| hypothetical protein TcasGA2_TC003212 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357622657|gb|EHJ74083.1| importin-7 [Danaus plexippus] Back     alignment and taxonomy information
>gi|307186404|gb|EFN72038.1| Importin-7 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|345496691|ref|XP_001602555.2| PREDICTED: importin-7-like, partial [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|380026689|ref|XP_003697077.1| PREDICTED: importin-7 [Apis florea] Back     alignment and taxonomy information
>gi|110767987|ref|XP_624116.2| PREDICTED: importin-7-like, partial [Apis mellifera] Back     alignment and taxonomy information
>gi|340708547|ref|XP_003392885.1| PREDICTED: importin-7-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350412904|ref|XP_003489809.1| PREDICTED: importin-7-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query99
ZFIN|ZDB-GENE-030131-458 1039 ipo7 "importin 7" [Danio rerio 0.565 0.053 0.607 1.2e-15
MGI|MGI:2444611 1010 Ipo8 "importin 8" [Mus musculu 0.565 0.055 0.535 5.1e-15
UNIPROTKB|F1SGB6 900 IPO8 "Uncharacterized protein" 0.565 0.062 0.535 9.6e-15
UNIPROTKB|O15397 1037 IPO8 "Importin-8" [Homo sapien 0.565 0.054 0.535 1.1e-14
UNIPROTKB|O42480 1038 ipo7 "RanBP7" [Xenopus laevis 0.565 0.053 0.571 1.4e-14
UNIPROTKB|E2R703 1036 IPO8 "Uncharacterized protein" 0.565 0.054 0.535 1.4e-14
UNIPROTKB|E1B8Q9 1039 IPO8 "Uncharacterized protein" 0.565 0.053 0.535 1.4e-14
UNIPROTKB|F1NPP2 1054 IPO8 "Uncharacterized protein" 0.565 0.053 0.553 1.8e-14
FB|FBgn0026252 1049 msk "moleskin" [Drosophila mel 0.888 0.083 0.45 2.9e-14
UNIPROTKB|F1NBA8 1009 IPO7 "Uncharacterized protein" 0.565 0.055 0.553 3.6e-14
ZFIN|ZDB-GENE-030131-458 ipo7 "importin 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 209 (78.6 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 34/56 (60%), Positives = 45/56 (80%)

Query:    44 VISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER 99
             +I+R+   +WMEI + V +R VP+ TL +DEDER + PWWKCKKWALHIL+R+FER
Sbjct:   219 LINRQNLTEWMEILKTVVDRDVPQETLQVDEDERPELPWWKCKKWALHILARLFER 274




GO:0006886 "intracellular protein transport" evidence=IEA
GO:0005643 "nuclear pore" evidence=IEA
GO:0008565 "protein transporter activity" evidence=IEA
MGI|MGI:2444611 Ipo8 "importin 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SGB6 IPO8 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O15397 IPO8 "Importin-8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O42480 ipo7 "RanBP7" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|E2R703 IPO8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1B8Q9 IPO8 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPP2 IPO8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0026252 msk "moleskin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBA8 IPO7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9EPL8IPO7_MOUSENo assigned EC number0.53570.56560.0539yesN/A
O95373IPO7_HUMANNo assigned EC number0.53570.56560.0539yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query99
COG5656 970 COG5656, SXM1, Importin, protein involved in nucle 2e-08
>gnl|CDD|227943 COG5656, SXM1, Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 20/52 (38%), Positives = 34/52 (65%)

Query: 48  EVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER 99
           E F+ W ++  ++ ++P+P   L+LD + R+ + W KCKKWA + L R F+R
Sbjct: 221 ETFSSWFQLSLRILQKPLPNEVLSLDPEVRSLSKWVKCKKWAAYNLYRSFQR 272


Length = 970

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 99
KOG1991|consensus 1010 99.88
COG5656 970 SXM1 Importin, protein involved in nuclear import 99.74
PF08506 370 Cse1: Cse1; InterPro: IPR013713 The exchange of ma 98.7
>KOG1991|consensus Back     alignment and domain information
Probab=99.88  E-value=1.2e-23  Score=187.14  Aligned_cols=66  Identities=47%  Similarity=0.949  Sum_probs=64.7

Q ss_pred             hheecccCHHhhchhhHHHHHHHHHHHcCCCCCCCCCCCChhhhhcCCceeehHHHHHHHHHHhcC
Q psy3385          34 IITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER   99 (99)
Q Consensus        34 ~~Ty~~LP~~L~~~e~~~~Wm~lf~~II~kpvP~e~l~~DedER~~~pWWK~KKWA~~iL~RLF~R   99 (99)
                      .++|++||..|.++++|.+||++|++|+++|+|.|+++.|+|+|+.+|||||||||+|||||+|+|
T Consensus       208 s~~~~~LP~~L~~~~~f~~W~~l~l~i~~rpvP~E~l~~d~e~R~~~~wwK~KKWa~~~L~Rlf~R  273 (1010)
T KOG1991|consen  208 SLIYYELPLELSAPETFTSWMELFLSILNRPVPVEVLSLDPEDRSSWPWWKCKKWALHILNRLFER  273 (1010)
T ss_pred             HHHHHhCCHHhhCchhHHHHHHHHHHHHcCCCChhcccCChhhcccccchhhHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999999999998



>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query99
1wa5_C 960 Importin alpha RE-exporter; nuclear transport/comp 97.85
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Back     alignment and structure
Probab=97.85  E-value=7.4e-06  Score=69.34  Aligned_cols=61  Identities=11%  Similarity=0.048  Sum_probs=46.0

Q ss_pred             heecccCHHhhchhhHHHHHHHHHHHcCCCCCCCCCCCChhhhhcCCceeehHHHHHHHHHHhcC
Q psy3385          35 ITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER   99 (99)
Q Consensus        35 ~Ty~~LP~~L~~~e~~~~Wm~lf~~II~kpvP~e~l~~DedER~~~pWWK~KKWA~~iL~RLF~R   99 (99)
                      +++.++|..+  .+++..|++.|.++++.+.|..  ..|+++++..+|||+|||++++++++++|
T Consensus       216 l~~~~~~~~~--~~~~~~~~~~~~~~l~~~~p~~--~~d~d~~~~~~~~~vk~~~~~~l~~l~~~  276 (960)
T 1wa5_C          216 FNCQDIPEFF--EDNIQVGMGIFHKYLSYSNPLL--EDPDETEHASVLIKVKSSIQELVQLYTTR  276 (960)
T ss_dssp             HHSSCCCHHH--HHTHHHHHHHHHHHHSCCSCCC--C------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccchHHH--HHHHHHHHHHHHHHHcCCCCcc--cCCcccccccHHHHHHHHHHHHHHHHHHH
Confidence            3457889887  4589999999999999877642  34567788899999999999999998753




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 99
d1wa5c_ 959 a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc 3e-05
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 Score = 38.7 bits (89), Expect = 3e-05
 Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 2/53 (3%)

Query: 47  REVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFER 99
            +     M IF +      P   L   ++    +   K K     ++     R
Sbjct: 226 EDNIQVGMGIFHKYLSYSNPL--LEDPDETEHASVLIKVKSSIQELVQLYTTR 276


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query99
d1wa5c_ 959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 93.7
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.70  E-value=0.02  Score=43.99  Aligned_cols=60  Identities=10%  Similarity=0.006  Sum_probs=42.2

Q ss_pred             heecccCHHhhchhhHHHHHHHHHHHcCCCCCCCCCCCChhhhhcCCceeehHHHHHHHHHHhc
Q psy3385          35 ITEVYTVHWVISREVFAQWMEIFRQVAERPVPEHTLTLDEDERADTPWWKCKKWALHILSRIFE   98 (99)
Q Consensus        35 ~Ty~~LP~~L~~~e~~~~Wm~lf~~II~kpvP~e~l~~DedER~~~pWWK~KKWA~~iL~RLF~   98 (99)
                      .++.++|..+.  +.+..|++.|..+++.+.|...  .+.++.....|.|+|||...++.++.+
T Consensus       216 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~~~  275 (959)
T d1wa5c_         216 FNCQDIPEFFE--DNIQVGMGIFHKYLSYSNPLLE--DPDETEHASVLIKVKSSIQELVQLYTT  275 (959)
T ss_dssp             HHSSCCCHHHH--HTHHHHHHHHHHHHSCCSCCCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhcchHHHH--HHHHHHHHHHHHHHhccccccc--CchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            34566777764  6789999999999999887443  233555666778899999998887754