Psyllid ID: psy3407
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | 2.2.26 [Sep-21-2011] | |||||||
| P18173 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.291 | 0.348 | 0.408 | 2e-37 | |
| P18172 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.291 | 0.348 | 0.394 | 6e-36 | |
| Q47944 | 531 | L-sorbose 1-dehydrogenase | yes | N/A | 0.265 | 0.374 | 0.365 | 5e-32 | |
| Q9WWW2 | 552 | Alcohol dehydrogenase [ac | yes | N/A | 0.345 | 0.469 | 0.346 | 1e-31 | |
| Q1QXE1 | 560 | Choline dehydrogenase OS= | no | N/A | 0.349 | 0.467 | 0.363 | 2e-31 | |
| Q6D6D9 | 559 | Choline dehydrogenase OS= | yes | N/A | 0.351 | 0.470 | 0.336 | 2e-30 | |
| C6DKY4 | 559 | Choline dehydrogenase OS= | yes | N/A | 0.348 | 0.466 | 0.345 | 2e-30 | |
| A8GBX9 | 555 | Choline dehydrogenase OS= | no | N/A | 0.349 | 0.472 | 0.336 | 3e-30 | |
| Q6UPE0 | 599 | Choline dehydrogenase, mi | yes | N/A | 0.335 | 0.419 | 0.349 | 5e-30 | |
| A4XPI5 | 565 | Choline dehydrogenase OS= | yes | N/A | 0.348 | 0.461 | 0.335 | 1e-29 |
| >sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 129/223 (57%), Gaps = 5/223 (2%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSP-R 59
M+Y RGN DY+DW GNPGW + +LP+F KSED D+ +H GG L V
Sbjct: 156 MMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFP 215
Query: 60 LSPDETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRE 119
+P + I++ AG+EL +++D+N GF T R G+R S+++AFL PA+ R
Sbjct: 216 YNPPLSYAILK-AGEELGF-SVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRN 273
Query: 120 NLIILKNTEVIKILIDSKLK-AYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLMLSG 178
NL IL NT KILI K GVE + G + +EV+LSAGAV SP +L+LSG
Sbjct: 274 NLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLLSG 333
Query: 179 IGIQKHLKEKNITVIKDLP-VGENLQDHVCFPGVLFSSNKDPA 220
+G + L++ N+ + +LP VG+NL +HV + F + D A
Sbjct: 334 VGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDADTA 376
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Essential for cuticular modification during development. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 1EC: .EC: 9EC: 9EC: .EC: 1EC: 0 |
| >sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura pseudoobscura GN=Gld PE=3 SV=4 | Back alignment and function description |
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| >sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3 SV=1 | Back alignment and function description |
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| >sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|A8GBX9|BETA_SERP5 Choline dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh PE=1 SV=1 | Back alignment and function description |
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| >sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | ||||||
| 328709186 | 603 | PREDICTED: glucose dehydrogenase [accept | 0.367 | 0.456 | 0.441 | 1e-58 | |
| 328715546 | 623 | PREDICTED: glucose dehydrogenase [accept | 0.472 | 0.568 | 0.363 | 4e-58 | |
| 340730088 | 591 | PREDICTED: glucose dehydrogenase [accept | 0.415 | 0.526 | 0.412 | 3e-51 | |
| 340730155 | 615 | PREDICTED: glucose dehydrogenase [accept | 0.332 | 0.404 | 0.457 | 7e-51 | |
| 350425616 | 605 | PREDICTED: glucose dehydrogenase [accept | 0.359 | 0.444 | 0.434 | 1e-50 | |
| 340730208 | 494 | PREDICTED: glucose dehydrogenase [accept | 0.345 | 0.524 | 0.439 | 1e-50 | |
| 350425598 | 611 | PREDICTED: glucose dehydrogenase [accept | 0.359 | 0.440 | 0.434 | 2e-50 | |
| 350425602 | 605 | PREDICTED: glucose dehydrogenase [accept | 0.332 | 0.411 | 0.453 | 2e-50 | |
| 383860466 | 628 | PREDICTED: glucose dehydrogenase [accept | 0.345 | 0.412 | 0.438 | 6e-50 | |
| 383860460 | 622 | PREDICTED: glucose dehydrogenase [accept | 0.392 | 0.472 | 0.419 | 8e-50 |
| >gi|328709186|ref|XP_001946945.2| PREDICTED: glucose dehydrogenase [acceptor]-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 178/283 (62%), Gaps = 8/283 (2%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPRL 60
ML RG D+++WE++G GWGF +LPYF+KSE+F D +R DA H G LTVSP +
Sbjct: 132 MLQIRGTKYDFDEWEKSGCTGWGFDSVLPYFIKSENFTDTTRYDAKIHGNCGPLTVSPFV 191
Query: 61 SPDETVKIIEAAGKELKIGTMYDINR-DQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRE 119
SPD ++ I A + + + D+N+ ++ +G+ D+TTR GLRCST KAFL P R
Sbjct: 192 SPDPAIQTISQAADLMGLTNVKDLNKIERSVGYAMSDSTTRDGLRCSTLKAFLMPNSGRP 251
Query: 120 NLIILKNTEVIKILIDSKLKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLMLSGI 179
NL + K V +ILI++K A GVE++ G+ VN T EVILSAG V SPQLLM+SGI
Sbjct: 252 NLFVAKYIRVTRILIENK-SAVGVEFVTKSGEFKTVNCTLEVILSAGVVMSPQLLMISGI 310
Query: 180 GIQKHLKEKNITVIKDLPVGENLQDHVCFPGVLFSSNKDPAI-----TLHYLRYLKVAAL 234
G HLKE ++ V+ DLPVG+N QDHV + G++ S K+ I LR +
Sbjct: 311 GPADHLKEMDVNVVADLPVGKNYQDHVAYFGLVLSDRKNRPIEDIVAESQKLRKETFDLI 370
Query: 235 -KGISTVEVAKVVGFINTKRNSLYPNVELLSIRIPMNSKERNN 276
KGIST+ + ++ F+++KR S P++E++ IR N+ ++ N
Sbjct: 371 PKGISTMGLTGLLSFVDSKRASGNPDIEIMKIRYSCNTTQQMN 413
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|328715546|ref|XP_001943515.2| PREDICTED: glucose dehydrogenase [acceptor]-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|340730088|ref|XP_003403320.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|340730155|ref|XP_003403352.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350425616|ref|XP_003494177.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340730208|ref|XP_003403377.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350425598|ref|XP_003494172.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|350425602|ref|XP_003494173.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|383860466|ref|XP_003705710.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|383860460|ref|XP_003705707.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Megachile rotundata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | ||||||
| FB|FBgn0030598 | 626 | CG9503 [Drosophila melanogaste | 0.391 | 0.468 | 0.392 | 4e-46 | |
| FB|FBgn0030591 | 865 | CG9517 [Drosophila melanogaste | 0.340 | 0.294 | 0.414 | 1.7e-41 | |
| FB|FBgn0030590 | 703 | CG9518 [Drosophila melanogaste | 0.389 | 0.415 | 0.378 | 3.5e-41 | |
| FB|FBgn0030592 | 726 | CG9514 [Drosophila melanogaste | 0.479 | 0.494 | 0.344 | 1e-40 | |
| FB|FBgn0039415 | 616 | CG6142 [Drosophila melanogaste | 0.348 | 0.423 | 0.386 | 1.8e-39 | |
| TIGR_CMR|SPO_2359 | 535 | SPO_2359 "oxidoreductase, GMC | 0.336 | 0.471 | 0.395 | 1.7e-36 | |
| UNIPROTKB|Q488U4 | 534 | CPS_0670 "Oxidoreductase, GMC | 0.347 | 0.486 | 0.361 | 2.6e-35 | |
| TIGR_CMR|CPS_0670 | 534 | CPS_0670 "oxidoreductase, GMC | 0.347 | 0.486 | 0.361 | 2.6e-35 | |
| FB|FBgn0001112 | 625 | Gld "Glucose dehydrogenase" [D | 0.291 | 0.348 | 0.408 | 3.8e-35 | |
| FB|FBgn0030587 | 616 | CG9522 [Drosophila melanogaste | 0.351 | 0.426 | 0.364 | 1.1e-33 |
| FB|FBgn0030598 CG9503 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 4.0e-46, P = 4.0e-46
Identities = 122/311 (39%), Positives = 177/311 (56%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTV--SP 58
MLY RG+ DY++WE GNP W ++ L YF KSED + + +H TGGYLTV +P
Sbjct: 151 MLYLRGSKHDYDNWEAMGNPSWSYRDALYYFKKSEDNTNQYLANTPYHATGGYLTVGEAP 210
Query: 59 RLSPDETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFR 118
+P +EA G E+ D+N ++ GF TTR G RCSTSKAFL PA+ R
Sbjct: 211 YHTP-LAASFVEA-GVEMGYENR-DLNGEKMTGFMIAQGTTRRGSRCSTSKAFLRPARLR 267
Query: 119 ENLIILKNTEVIKILIDSKLK-AYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLMLS 177
NL I N+ V +I+ID K A+GVE++ Q K+ HV +T+EV+LS G+V SPQLLMLS
Sbjct: 268 PNLHISMNSHVTRIMIDPVTKLAFGVEFVKDQ-KLYHVRATKEVVLSGGSVNSPQLLMLS 326
Query: 178 GIGIQKHLKEKNITVIKDLPVGENLQDHVCFPGVLFSSNKDPAIT---LHYLRYLKVAAL 234
G+G +K L + I +IK+L VGENLQDH+ G+ F N+ +I H + + +
Sbjct: 327 GVGPRKELAKHRIPLIKELSVGENLQDHIGLGGLTFLVNQPVSIVENRFHTMSTVLQYVV 386
Query: 235 KGISTVEV---AKVVGFINTK--RNSL-YPNVELLSIRIPMNSKERNNGKSVMG--SLFG 286
G + + + + ++NTK +SL +P++E + NS + + G F
Sbjct: 387 FGQGPLTILGGVEGLAYVNTKYANSSLDWPDIEFHFVSGSTNSDGGSQLRKAHGLTDAFY 446
Query: 287 QEVLVDDNDKD 297
+ V N++D
Sbjct: 447 RAVFEPINNRD 457
|
|
| FB|FBgn0030591 CG9517 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030590 CG9518 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030592 CG9514 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0039415 CG6142 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SPO_2359 SPO_2359 "oxidoreductase, GMC family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q488U4 CPS_0670 "Oxidoreductase, GMC family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CPS_0670 CPS_0670 "oxidoreductase, GMC family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
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| FB|FBgn0001112 Gld "Glucose dehydrogenase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030587 CG9522 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 749 | |||
| PRK02106 | 560 | PRK02106, PRK02106, choline dehydrogenase; Validat | 5e-57 | |
| COG2303 | 542 | COG2303, BetA, Choline dehydrogenase and related f | 1e-51 | |
| TIGR01810 | 532 | TIGR01810, betA, choline dehydrogenase | 1e-42 | |
| TIGR03970 | 487 | TIGR03970, Rv0697, dehydrogenase, Rv0697 family | 8e-31 | |
| pfam00732 | 218 | pfam00732, GMC_oxred_N, GMC oxidoreductase | 2e-29 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 9e-12 | |
| cd13309 | 103 | cd13309, PH_SKIP, SifA and kinesin-interacting pro | 8e-10 |
| >gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 5e-57
Identities = 105/281 (37%), Positives = 140/281 (49%), Gaps = 40/281 (14%)
Query: 1 MLYQRGNDRDYNDW-ERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVS-- 57
M+Y RGN DY++W E G GW + LPYF K+E + + G L+V+
Sbjct: 97 MVYIRGNAMDYDNWAELPGLEGWSYADCLPYFKKAETRDG---GEDDYRGGDGPLSVTRG 153
Query: 58 -PRLSPDETVKIIEA---AGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLE 113
P +P + +A AG + D+N Q GFGP D T G R S ++A+L+
Sbjct: 154 KPGTNP-----LFQAFVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTNGRRWSAARAYLD 208
Query: 114 PAKFRENLIILKNTEVIKILIDSKLKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQL 173
PA R NL I+ + +IL + K +A GVEY G + REVILSAGA+ SPQL
Sbjct: 209 PALKRPNLTIVTHALTDRILFEGK-RAVGVEYERG-GGRETARARREVILSAGAINSPQL 266
Query: 174 LMLSGIGIQKHLKEKNITVIKDLP-VGENLQDH--VCF------PGVLFSSNK---DPAI 221
L LSGIG +HLKE I V+ DLP VGENLQDH V P L+ + K P I
Sbjct: 267 LQLSGIGPAEHLKELGIPVVHDLPGVGENLQDHLEVYIQYECKQPVSLYPALKWWNKPKI 326
Query: 222 TLHYLRYLKVAALKGIST---VEVAKVVGFINTKRNSLYPN 259
+L + G+ E GFI ++ +PN
Sbjct: 327 GAEWL-FTG----TGLGASNHFEAG---GFIRSRAGVDWPN 359
|
Length = 560 |
| >gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family | Back alignment and domain information |
|---|
| >gnl|CDD|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
| >gnl|CDD|241463 cd13309, PH_SKIP, SifA and kinesin-interacting protein Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| PRK02106 | 560 | choline dehydrogenase; Validated | 100.0 | |
| TIGR01810 | 532 | betA choline dehydrogenase. This enzyme is a membe | 100.0 | |
| KOG1238|consensus | 623 | 100.0 | ||
| COG2303 | 542 | BetA Choline dehydrogenase and related flavoprotei | 100.0 | |
| PLN02785 | 587 | Protein HOTHEAD | 100.0 | |
| PF00732 | 296 | GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 | 100.0 | |
| TIGR02462 | 544 | pyranose_ox pyranose oxidase. Pyranose oxidase (al | 100.0 | |
| PF05199 | 144 | GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078 | 99.67 | |
| PRK12835 | 584 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.9 | |
| PRK12837 | 513 | 3-ketosteroid-delta-1-dehydrogenase; Provisional | 96.46 | |
| PRK07843 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.12 | |
| PRK07121 | 492 | hypothetical protein; Validated | 95.94 | |
| PRK12844 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 95.87 | |
| PRK08274 | 466 | tricarballylate dehydrogenase; Validated | 95.53 | |
| PRK05675 | 570 | sdhA succinate dehydrogenase flavoprotein subunit; | 95.44 | |
| PF00890 | 417 | FAD_binding_2: FAD binding domain of the Pfam fami | 95.41 | |
| PRK06263 | 543 | sdhA succinate dehydrogenase flavoprotein subunit; | 95.22 | |
| TIGR01811 | 603 | sdhA_Bsu succinate dehydrogenase or fumarate reduc | 95.08 | |
| PRK08958 | 588 | sdhA succinate dehydrogenase flavoprotein subunit; | 94.95 | |
| PRK12845 | 564 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 94.8 | |
| PRK12839 | 572 | hypothetical protein; Provisional | 94.79 | |
| PRK06134 | 581 | putative FAD-binding dehydrogenase; Reviewed | 94.71 | |
| PRK07573 | 640 | sdhA succinate dehydrogenase flavoprotein subunit; | 94.69 | |
| PRK06452 | 566 | sdhA succinate dehydrogenase flavoprotein subunit; | 94.67 | |
| TIGR01813 | 439 | flavo_cyto_c flavocytochrome c. This model describ | 94.61 | |
| PRK06175 | 433 | L-aspartate oxidase; Provisional | 94.28 | |
| PRK12843 | 578 | putative FAD-binding dehydrogenase; Reviewed | 94.05 | |
| PRK09078 | 598 | sdhA succinate dehydrogenase flavoprotein subunit; | 94.04 | |
| TIGR01816 | 565 | sdhA_forward succinate dehydrogenase, flavoprotein | 93.87 | |
| PRK09231 | 582 | fumarate reductase flavoprotein subunit; Validated | 93.69 | |
| PTZ00139 | 617 | Succinate dehydrogenase [ubiquinone] flavoprotein | 93.58 | |
| PRK08275 | 554 | putative oxidoreductase; Provisional | 93.2 | |
| COG0029 | 518 | NadB Aspartate oxidase [Coenzyme metabolism] | 93.08 | |
| PLN02815 | 594 | L-aspartate oxidase | 93.08 | |
| PLN00128 | 635 | Succinate dehydrogenase [ubiquinone] flavoprotein | 92.99 | |
| PF15410 | 119 | PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN | 92.92 | |
| TIGR01176 | 580 | fum_red_Fp fumarate reductase, flavoprotein subuni | 92.81 | |
| TIGR01812 | 566 | sdhA_frdA_Gneg succinate dehydrogenase or fumarate | 92.79 | |
| PF01266 | 358 | DAO: FAD dependent oxidoreductase; InterPro: IPR00 | 92.78 | |
| PRK08071 | 510 | L-aspartate oxidase; Provisional | 92.75 | |
| PRK05945 | 575 | sdhA succinate dehydrogenase flavoprotein subunit; | 92.74 | |
| PRK12842 | 574 | putative succinate dehydrogenase; Reviewed | 92.69 | |
| PRK08641 | 589 | sdhA succinate dehydrogenase flavoprotein subunit; | 92.67 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 92.66 | |
| PRK09077 | 536 | L-aspartate oxidase; Provisional | 92.65 | |
| PRK07395 | 553 | L-aspartate oxidase; Provisional | 92.53 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 92.52 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 92.24 | |
| PRK08626 | 657 | fumarate reductase flavoprotein subunit; Provision | 92.1 | |
| PRK06481 | 506 | fumarate reductase flavoprotein subunit; Validated | 92.01 | |
| TIGR00551 | 488 | nadB L-aspartate oxidase. L-aspartate oxidase is t | 91.95 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 91.8 | |
| PRK07057 | 591 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.67 | |
| PRK07512 | 513 | L-aspartate oxidase; Provisional | 91.3 | |
| KOG2404|consensus | 477 | 91.18 | ||
| PRK08205 | 583 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.12 | |
| PRK07803 | 626 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.09 | |
| PTZ00306 | 1167 | NADH-dependent fumarate reductase; Provisional | 91.06 | |
| PRK13977 | 576 | myosin-cross-reactive antigen; Provisional | 91.05 | |
| PRK12834 | 549 | putative FAD-binding dehydrogenase; Reviewed | 90.61 | |
| PRK06854 | 608 | adenylylsulfate reductase subunit alpha; Validated | 90.16 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 89.95 | |
| PRK06069 | 577 | sdhA succinate dehydrogenase flavoprotein subunit; | 89.9 | |
| TIGR03377 | 516 | glycerol3P_GlpA glycerol-3-phosphate dehydrogenase | 89.79 | |
| cd01230 | 117 | PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 | 89.3 | |
| PF13738 | 203 | Pyr_redox_3: Pyridine nucleotide-disulphide oxidor | 88.64 | |
| PLN02464 | 627 | glycerol-3-phosphate dehydrogenase | 88.62 | |
| TIGR02485 | 432 | CobZ_N-term precorrin 3B synthase CobZ. CobZ is es | 88.06 | |
| TIGR02061 | 614 | aprA adenosine phosphosulphate reductase, alpha su | 88.01 | |
| PRK07804 | 541 | L-aspartate oxidase; Provisional | 87.39 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 87.37 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 87.17 | |
| PRK11101 | 546 | glpA sn-glycerol-3-phosphate dehydrogenase subunit | 87.05 | |
| PRK05257 | 494 | malate:quinone oxidoreductase; Validated | 86.65 | |
| COG0579 | 429 | Predicted dehydrogenase [General function predicti | 85.56 | |
| cd01263 | 122 | PH_anillin Anillin Pleckstrin homology (PH) domain | 85.51 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 84.97 | |
| COG0578 | 532 | GlpA Glycerol-3-phosphate dehydrogenase [Energy pr | 84.92 | |
| TIGR03378 | 419 | glycerol3P_GlpB glycerol-3-phosphate dehydrogenase | 84.78 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 83.98 | |
| PF06039 | 488 | Mqo: Malate:quinone oxidoreductase (Mqo); InterPro | 83.66 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 83.53 | |
| COG1053 | 562 | SdhA Succinate dehydrogenase/fumarate reductase, f | 83.17 | |
| PF12831 | 428 | FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 | 81.73 | |
| PRK05329 | 422 | anaerobic glycerol-3-phosphate dehydrogenase subun | 81.38 |
| >PRK02106 choline dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-61 Score=544.65 Aligned_cols=382 Identities=28% Similarity=0.438 Sum_probs=298.7
Q ss_pred CEEEcCChhhhHHHHHc-CCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCCcccCCC-CCCChHHHHHHHHHHHcCC
Q psy3407 1 MLYQRGNDRDYNDWERA-GNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPR-LSPDETVKIIEAAGKELKI 78 (749)
Q Consensus 1 Miy~RGsp~DFD~Wa~l-G~~GWSYddLePYY~KaE~~~~gvsg~~~~hG~~GPl~V~~P-~~~~p~~~~f~~A~~eLG~ 78 (749)
|+|.|+++.|||.|+++ |++||+|++|+|||+|+|++ .. +..++||..||++++.+ .+.++..+.|.++++++|+
T Consensus 97 ~~~~R~~~~Dfd~w~~~~g~~~Ws~~~l~py~~k~E~~-~~--~~~~~~g~~gp~~~~~~~~~~~~~~~~~~~a~~~lG~ 173 (560)
T PRK02106 97 MVYIRGNAMDYDNWAELPGLEGWSYADCLPYFKKAETR-DG--GEDDYRGGDGPLSVTRGKPGTNPLFQAFVEAGVQAGY 173 (560)
T ss_pred eEEecCCHHHHHHHHhhcCCCCCCHHHHHHHHHHhhcc-CC--CCccccCCCCCEEEeCCCCCCCHHHHHHHHHHHHcCC
Confidence 78999999999999987 88999999999999999998 52 23456888999998876 5678999999999999999
Q ss_pred CCCCCCCCCCCccccccccccCCCcccchhhhhhhhhccCCCeEEEcccEEEEEEeCCCCcEEEEEEEecCCeEEEEEec
Q psy3407 79 GTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRENLIILKNTEVIKILIDSKLKAYGVEYINSQGKICHVNST 158 (749)
Q Consensus 79 ~~~~D~N~g~~~G~~~c~~~c~~GaR~Saa~ayL~pa~~r~NLtIlT~a~V~RIl~d~ggrAtGV~y~d~~G~~~~V~Ar 158 (749)
+...+.|++...|++.|..+|+.|+|+++..+||+++.+++|++|++++.|+||+++ +++|+||+|.+.+++ .++.++
T Consensus 174 ~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~a~~~~nl~i~~~a~V~rI~~~-~~~a~GV~~~~~~~~-~~~~~a 251 (560)
T PRK02106 174 PRTDDLNGYQQEGFGPMDRTVTNGRRWSAARAYLDPALKRPNLTIVTHALTDRILFE-GKRAVGVEYERGGGR-ETARAR 251 (560)
T ss_pred CcCCCCCCCCCceeEEEeeecCCCEEEChHHHhhccccCCCCcEEEcCCEEEEEEEe-CCeEEEEEEEeCCcE-EEEEee
Confidence 999899988888998888899999999999999999888999999999999999998 679999999984444 444455
Q ss_pred cEEEEccCCCCChHHHhhcCCCccccccccCcceeecCC-CCCCcccccccceEEEEeCCCCccccch---H--HHH-H-
Q psy3407 159 REVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVIKDLP-VGENLQDHVCFPGVLFSSNKDPAITLHY---L--RYL-K- 230 (749)
Q Consensus 159 KeVILAAGAIeTPrLLL~SGIGpas~L~~~GIpvVaDLP-VGRNLqDHp~v~~v~~~~~e~~~~~~~~---~--~l~-~- 230 (749)
|+||||||||+||+|||+|||||+++|+++||++++|+| ||||||||+.+. +.+.++++....... . ... .
T Consensus 252 k~VILaaGai~TP~LLl~SGIG~~~~L~~~gI~~~~dlP~VG~NL~dH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (560)
T PRK02106 252 REVILSAGAINSPQLLQLSGIGPAEHLKELGIPVVHDLPGVGENLQDHLEVY-IQYECKQPVSLYPALKWWNKPKIGAEW 330 (560)
T ss_pred eeEEEccCCCCCHHHHhhcCCCChHHHHhcCCceEeeCCCCCcChhhCccce-EEEEeCCCcccccccchhhhhHHHHHH
Confidence 999999999999999999999999999999999999999 999999999987 788877654321100 0 011 1
Q ss_pred HhhccC-ccccccceEEEEEecCCCCCCCceeeeeccccCCccccccccccccceeeeeeeccCCCCeEEecCCCCCCCc
Q psy3407 231 VAALKG-ISTVEVAKVVGFINTKRNSLYPNVELLSIRIPMNSKERNNGKSVMGSLFGQEVLVDDNDKDVIASPTNLTAKV 309 (749)
Q Consensus 231 ~~~r~G-~ts~~~~e~~~f~~s~~~~~~Pdiq~~f~p~~~g~d~~~~~~~~~g~~i~i~l~lP~srGrVtL~skDp~G~P 309 (749)
...+.| ++ ....+..+|.+.......|++++.+.+..+....... ....++.+...+++|.++|+|+|+++||++.|
T Consensus 331 ~~~~~g~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~srG~V~L~s~d~~~~P 408 (560)
T PRK02106 331 LFTGTGLGA-SNHFEAGGFIRSRAGVDWPNIQYHFLPVAIRYDGSNA-VKGHGFQAHVGPMRSPSRGSVKLKSADPRAHP 408 (560)
T ss_pred HhcCCCCcc-ccccceeeEEecCCCCCCCCeEEEEeeccccccCCCC-CCCCeEEEEEEecCCcceEEEEEeCCCCccCc
Confidence 233455 43 2233445666654323457777665543322111111 11123444556789999999999999999999
Q ss_pred eEEEeecCCCCCcccHHHHHHHHHHHHHHHHHHHHh-cCCCCcccccCCCC---CCcc--------cCCCCCCccccccC
Q psy3407 310 QTIFESFTKMSETNININKKQFMSNMDKVFETIKTK-FEPFAEGEIPIESR---SSYW--------NNNSDGTSKEACEM 377 (749)
Q Consensus 310 vI~i~Y~s~~~~p~~~~D~a~L~egir~arrIL~AA-ga~~~~~eis~~s~---~~~~--------~~~~~Gt~mGTcRM 377 (749)
.++++|+.+ | +|+++++++++.++++++++ +.++.+.++.+... .+.| .... |.+|||||
T Consensus 409 ~i~~~y~~~---~---~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~--H~~GTcrM 480 (560)
T PRK02106 409 SILFNYMST---E---QDWREFRDAIRLTREIMAQPALDPYRGREISPGADVQTDEEIDAFVREHAETAY--HPSCTCKM 480 (560)
T ss_pred eEccccCCC---H---HHHHHHHHHHHHHHHHHcChhhhhccccccCCCcccCCHHHHHHHHHhccCcCc--ccCCCeec
Confidence 999999999 7 99999999999999999874 33333333322110 0001 1223 49999999
Q ss_pred CCCCCCCCCCCCCccCCCCCccCCCCcc
Q psy3407 378 GKLGSSTPIKKHSVITSNNNSLNLENIL 405 (749)
Q Consensus 378 G~D~~~~p~PktSVVD~~grsHD~~NL~ 405 (749)
|+| | +||||++||+|+++|||
T Consensus 481 G~d------~-~sVVD~~~rV~Gv~nLr 501 (560)
T PRK02106 481 GTD------P-MAVVDPEGRVHGVEGLR 501 (560)
T ss_pred CCC------C-CeeECCCCEEeccCCeE
Confidence 997 7 89999999999999998
|
|
| >TIGR01810 betA choline dehydrogenase | Back alignment and domain information |
|---|
| >KOG1238|consensus | Back alignment and domain information |
|---|
| >COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02785 Protein HOTHEAD | Back alignment and domain information |
|---|
| >PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >TIGR02462 pyranose_ox pyranose oxidase | Back alignment and domain information |
|---|
| >PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK07121 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK08274 tricarballylate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PF00890 FAD_binding_2: FAD binding domain of the Pfam family | Back alignment and domain information |
|---|
| >PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup | Back alignment and domain information |
|---|
| >PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12839 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06134 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01813 flavo_cyto_c flavocytochrome c | Back alignment and domain information |
|---|
| >PRK06175 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK12843 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E | Back alignment and domain information |
|---|
| >PRK09231 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >PRK08275 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >COG0029 NadB Aspartate oxidase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PLN02815 L-aspartate oxidase | Back alignment and domain information |
|---|
| >PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit | Back alignment and domain information |
|---|
| >PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A | Back alignment and domain information |
|---|
| >TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit | Back alignment and domain information |
|---|
| >TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup | Back alignment and domain information |
|---|
| >PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 | Back alignment and domain information |
|---|
| >PRK08071 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK12842 putative succinate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK09077 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK07395 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK08626 fumarate reductase flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >PRK06481 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >TIGR00551 nadB L-aspartate oxidase | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK07512 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >KOG2404|consensus | Back alignment and domain information |
|---|
| >PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PTZ00306 NADH-dependent fumarate reductase; Provisional | Back alignment and domain information |
|---|
| >PRK13977 myosin-cross-reactive antigen; Provisional | Back alignment and domain information |
|---|
| >PRK12834 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK06854 adenylylsulfate reductase subunit alpha; Validated | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit | Back alignment and domain information |
|---|
| >cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A | Back alignment and domain information |
|---|
| >PLN02464 glycerol-3-phosphate dehydrogenase | Back alignment and domain information |
|---|
| >TIGR02485 CobZ_N-term precorrin 3B synthase CobZ | Back alignment and domain information |
|---|
| >TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit | Back alignment and domain information |
|---|
| >PRK07804 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional | Back alignment and domain information |
|---|
| >PRK05257 malate:quinone oxidoreductase; Validated | Back alignment and domain information |
|---|
| >COG0579 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A | Back alignment and domain information |
|---|
| >PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 749 | ||||
| 3fim_B | 566 | Crystal Structure Of Aryl-Alcohol-Oxidase From Pleu | 6e-18 | ||
| 2jbv_A | 546 | Crystal Structure Of Choline Oxidase Reveals Insigh | 2e-17 | ||
| 3nne_A | 546 | Crystal Structure Of Choline Oxidase S101a Mutant L | 3e-17 | ||
| 3ljp_A | 546 | Crystal Structure Of Choline Oxidase V464a Mutant L | 3e-17 | ||
| 3t37_A | 526 | Crystal Structure Of Pyridoxine 4-Oxidase From Meso | 1e-16 | ||
| 1cf3_A | 583 | Glucose Oxidase From Apergillus Niger Length = 583 | 2e-15 | ||
| 3q9t_A | 577 | Crystal Structure Analysis Of Formate Oxidase Lengt | 1e-11 | ||
| 1gpe_A | 587 | Glucose Oxidase From Penicillium Amagasakiense Leng | 9e-11 | ||
| 3red_A | 521 | 3.0 A Structure Of The Prunus Mume Hydroxynitrile L | 6e-08 | ||
| 3gdn_A | 521 | Almond Hydroxynitrile Lyase In Complex With Benzald | 6e-08 | ||
| 1ju2_A | 536 | Crystal Structure Of The Hydroxynitrile Lyase From | 6e-08 |
| >pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus Eryingii Length = 566 | Back alignment and structure |
|
| >pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism Length = 546 | Back alignment and structure |
| >pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant Length = 546 | Back alignment and structure |
| >pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant Length = 546 | Back alignment and structure |
| >pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti Length = 526 | Back alignment and structure |
| >pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger Length = 583 | Back alignment and structure |
| >pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase Length = 577 | Back alignment and structure |
| >pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense Length = 587 | Back alignment and structure |
| >pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 Length = 521 | Back alignment and structure |
| >pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde Length = 521 | Back alignment and structure |
| >pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond Length = 536 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Length = 583 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 5e-85
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 20/276 (7%)
Query: 1 MLYQRGNDRDYNDWERA-GNPGWGFKHILPYFLKSEDFQDIS--------RQDAAFHNTG 51
+ R + + WE GN GW + ++ Y L++E + + +A+ H
Sbjct: 109 GTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVN 168
Query: 52 GYLTVSPRLSPDETVKIIEA---AGKELKIGTMYDINRDQYIGFGPFD-TTTRYGLRCST 107
G + PR + D+ I++A A ++ + T D G F T +R
Sbjct: 169 GTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDA 228
Query: 108 SKAFLEPAKFRENLIILKNTEVIKILID---SKLKAYGVEYINSQGKICHVNSTREVILS 164
++ +L P R NL +L V K+L+ + +A GVE+ +G +V + EV+L+
Sbjct: 229 AREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLA 288
Query: 165 AGAVGSPQLLMLSGIGIQKHLKEKNITVIKDLPVGENLQDHVCFPGVLFSSNKDPAITLH 224
AG+ SP +L SGIG++ L+ I + DLPVG NLQD V A
Sbjct: 289 AGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQTTA-TVRSRITSAGAGQGQ 347
Query: 225 YLRYLKVAALKGISTVEVAKVVGFINTKRNSLYPNV 260
+ G K +NTK
Sbjct: 348 AAWFATFNETFG---DYSEKAHELLNTKLEQWAEEA 380
|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Length = 587 | Back alignment and structure |
|---|
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Length = 566 | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Length = 577 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Length = 526 | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Length = 536 | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Length = 546 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112 | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 Length = 122 | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123 | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168 | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109 | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Length = 106 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| 3fim_B | 566 | ARYL-alcohol oxidase; AAO, lignin degradation, oxi | 100.0 | |
| 3qvp_A | 583 | Glucose oxidase; oxidoreductase; HET: NAG BMA MAN | 100.0 | |
| 3q9t_A | 577 | Choline dehydrogenase and related flavoproteins; g | 100.0 | |
| 1gpe_A | 587 | Protein (glucose oxidase); oxidoreductase(flavopro | 100.0 | |
| 2jbv_A | 546 | Choline oxidase; alcohol oxidation, flavoenyzme ox | 100.0 | |
| 3t37_A | 526 | Probable dehydrogenase; BET alpha beta fold, ADP b | 100.0 | |
| 1kdg_A | 546 | CDH, cellobiose dehydrogenase; GMC oxidoreductase, | 100.0 | |
| 1ju2_A | 536 | HydroxynitrIle lyase; flavin, GMC oxidoreductase, | 100.0 | |
| 1n4w_A | 504 | CHOD, cholesterol oxidase; flavoenzyme, steroid me | 100.0 | |
| 1coy_A | 507 | Cholesterol oxidase; oxidoreductase(oxygen recepto | 100.0 | |
| 3pl8_A | 623 | Pyranose 2-oxidase; substrate complex, H167A mutan | 100.0 | |
| 4at0_A | 510 | 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore | 96.93 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 95.69 | |
| 1y0p_A | 571 | Fumarate reductase flavoprotein subunit; flavocyto | 94.84 | |
| 1qo8_A | 566 | Flavocytochrome C3 fumarate reductase; oxidoreduct | 94.81 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 94.74 | |
| 1d4d_A | 572 | Flavocytochrome C fumarate reductase; oxidoreducta | 94.73 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 94.34 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 93.77 | |
| 2wdq_A | 588 | Succinate dehydrogenase flavoprotein subunit; succ | 93.73 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 93.51 | |
| 2h88_A | 621 | Succinate dehydrogenase flavoprotein subunit; comp | 93.41 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 93.41 | |
| 2bs2_A | 660 | Quinol-fumarate reductase flavoprotein subunit A; | 93.3 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 93.3 | |
| 1chu_A | 540 | Protein (L-aspartate oxidase); flavoenzyme, NAD bi | 93.02 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 92.8 | |
| 3da1_A | 561 | Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 | 92.66 | |
| 1kf6_A | 602 | Fumarate reductase flavoprotein; respiration, fuma | 92.63 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 92.16 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 92.05 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 91.95 | |
| 4dgk_A | 501 | Phytoene dehydrogenase; the FAD/NAD(P)-binding ros | 91.9 | |
| 2rgh_A | 571 | Alpha-glycerophosphate oxidase; flavoprotein oxida | 91.9 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 91.7 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 91.65 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 91.58 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 91.4 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 91.3 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 91.25 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 90.64 | |
| 3pp2_A | 124 | RHO GTPase-activating protein 27; PH domain, GTPas | 90.59 | |
| 3dme_A | 369 | Conserved exported protein; structural genomics, P | 90.13 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 89.99 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 89.79 | |
| 3e1t_A | 512 | Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro | 89.43 | |
| 3gyx_A | 662 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 89.24 | |
| 1jnr_A | 643 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 88.81 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 88.68 | |
| 3ka7_A | 425 | Oxidoreductase; structural genomics, PSI-2, protei | 88.58 | |
| 3dje_A | 438 | Fructosyl amine: oxygen oxidoreductase; fructosyl- | 88.48 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 88.29 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 87.86 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 87.73 | |
| 3cgv_A | 397 | Geranylgeranyl reductase related protein; NP_39399 | 87.39 | |
| 1rp0_A | 284 | ARA6, thiazole biosynthetic enzyme; protein ligand | 87.3 | |
| 3atr_A | 453 | Conserved archaeal protein; saturating double bond | 87.29 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 86.64 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 86.43 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 86.07 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 85.75 | |
| 3f8d_A | 323 | Thioredoxin reductase (TRXB-3); redox protein, nuc | 84.89 | |
| 1y56_B | 382 | Sarcosine oxidase; dehydrogenase, protein-protein | 84.78 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 84.46 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 84.16 | |
| 1v5m_A | 136 | SH2 and PH domain-containing adapter protein APS; | 83.55 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 83.5 | |
| 2i0z_A | 447 | NAD(FAD)-utilizing dehydrogenases; structural geno | 82.86 | |
| 3itj_A | 338 | Thioredoxin reductase 1; disulfide B flavoprotein, | 82.71 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 82.5 | |
| 3axb_A | 448 | Putative oxidoreductase; dinucleotide-binding fold | 82.41 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 81.61 | |
| 3cty_A | 319 | Thioredoxin reductase; FAD, oxidoreductase, flavin | 81.55 | |
| 3r9u_A | 315 | Thioredoxin reductase; structural genomics, center | 81.18 | |
| 2gag_B | 405 | Heterotetrameric sarcosine oxidase beta-subunit; f | 80.9 | |
| 3ab1_A | 360 | Ferredoxin--NADP reductase; oxidoreductase, electr | 80.89 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 80.88 | |
| 2gmh_A | 584 | Electron transfer flavoprotein-ubiquinone oxidored | 80.45 | |
| 1fl2_A | 310 | Alkyl hydroperoxide reductase subunit F; reactive | 80.41 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 80.4 |
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-65 Score=583.57 Aligned_cols=389 Identities=20% Similarity=0.267 Sum_probs=318.0
Q ss_pred CEEEcCChhhhHHHHHc-CCCCCCccchHHHHHHhhcCCCCCCC--------CCCCCCCCCCcccCCCCCCChHHHHHHH
Q psy3407 1 MLYQRGNDRDYNDWERA-GNPGWGFKHILPYFLKSEDFQDISRQ--------DAAFHNTGGYLTVSPRLSPDETVKIIEA 71 (749)
Q Consensus 1 Miy~RGsp~DFD~Wa~l-G~~GWSYddLePYY~KaE~~~~gvsg--------~~~~hG~~GPl~V~~P~~~~p~~~~f~~ 71 (749)
|+|+||++.|||.|+++ |++||+|++|+|||+|+|++ ..+.. ++.+||.+||++++++.+..++.+.|.+
T Consensus 93 m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~-~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~~~~~~~~~~ 171 (566)
T 3fim_B 93 MVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMV-VPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRVLA 171 (566)
T ss_dssp CBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEE-CCCTTCCCCTTTSCGGGSCBSSSEEEBSCSSCCTHHHHHHH
T ss_pred eEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhcc-CCccccccccccCCccccCCCCCeeeecCCCCCHHHHHHHH
Confidence 89999999999999998 99999999999999999998 54421 2468999999999999888999999999
Q ss_pred HHHHc--CCCCCCCCCCCCCccccccccccCCCcccchhhhhhhhhccCCCeEEEcccEEEEEEeC---CC-CcEEEEEE
Q psy3407 72 AGKEL--KIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRENLIILKNTEVIKILID---SK-LKAYGVEY 145 (749)
Q Consensus 72 A~~eL--G~~~~~D~N~g~~~G~~~c~~~c~~GaR~Saa~ayL~pa~~r~NLtIlT~a~V~RIl~d---~g-grAtGV~y 145 (749)
+++++ |++...|+|++...|++.|+.+|++|.|+|++.+||.|+++|+||+|++++.|+||+++ ++ +||+||+|
T Consensus 172 a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~ 251 (566)
T 3fim_B 172 TTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEY 251 (566)
T ss_dssp HHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEE
T ss_pred HHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEE
Confidence 99999 99999999999999999999999999999999999999989999999999999999998 34 79999999
Q ss_pred EecCC-eEEEEEeccEEEEccCCCCChHHHhhcCCCccccccccCcceeecCC-CCCCcccccccceEEEEeCCCCccc-
Q psy3407 146 INSQG-KICHVNSTREVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVIKDLP-VGENLQDHVCFPGVLFSSNKDPAIT- 222 (749)
Q Consensus 146 ~d~~G-~~~~V~ArKeVILAAGAIeTPrLLL~SGIGpas~L~~~GIpvVaDLP-VGRNLqDHp~v~~v~~~~~e~~~~~- 222 (749)
.+.+| +.++++|+||||||||||+||||||+|||||+++|+++||+|++|+| ||+|||||+.+. +.|..+.+....
T Consensus 252 ~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~-~~~~~~~~~~~~~ 330 (566)
T 3fim_B 252 AEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLP-AAFFVNSNQTFDN 330 (566)
T ss_dssp ESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEEC-CEEEESCSCSSGG
T ss_pred EECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccce-EEEEeCCCcccch
Confidence 87556 88899999999999999999999999999999999999999999999 999999999887 778776554321
Q ss_pred --cchHHH----HH-HhhccC-ccccccceEEEEEecCC-------------CCCCCceeeeeccccCCccccccccccc
Q psy3407 223 --LHYLRY----LK-VAALKG-ISTVEVAKVVGFINTKR-------------NSLYPNVELLSIRIPMNSKERNNGKSVM 281 (749)
Q Consensus 223 --~~~~~l----~~-~~~r~G-~ts~~~~e~~~f~~s~~-------------~~~~Pdiq~~f~p~~~g~d~~~~~~~~~ 281 (749)
...... .. ...++| ++ ....+..+|+++.. ....|++|+++.+..... .........
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~G~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~-~~~~~~~~~ 408 (566)
T 3fim_B 331 IFRDSSEFNVDLDQWTNTRTGPLT-ALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFHP-AIPRPDTGS 408 (566)
T ss_dssp GGTCHHHHHHHHHHHHHHSCSGGG-CCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESSCCCT-TSCCCSSCC
T ss_pred hhcChHHHHHHHHHHHhcCCCCcc-cChhhheeeeccccchhhhhhhccccccCCCCCEEEEecccchhh-cccCCCCCC
Confidence 011111 12 556888 76 45567788987642 135788988776543322 111111223
Q ss_pred cceeeeeeeccCCCCeEEecCCCCCCCceEEEeecCCCCCcccHHHHHHHHHHHHHHHHHHHH-hcCCCCcccccCC-C-
Q psy3407 282 GSLFGQEVLVDDNDKDVIASPTNLTAKVQTIFESFTKMSETNININKKQFMSNMDKVFETIKT-KFEPFAEGEIPIE-S- 358 (749)
Q Consensus 282 g~~i~i~l~lP~srGrVtL~skDp~G~PvI~i~Y~s~~~~p~~~~D~a~L~egir~arrIL~A-Aga~~~~~eis~~-s- 358 (749)
.+.+...+++|.|||+|+|+++||++.|.|+++|+.+ | .|++.++++++.+++|+++ +++.+...+..+. .
T Consensus 409 ~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~---~---~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~P~~~~ 482 (566)
T 3fim_B 409 FMSVTNALISPVARGDIKLATSNPFDKPLINPQYLST---E---FDIFTMIQAVKSNLRFLSGQAWADFVIRPFDPRLRD 482 (566)
T ss_dssp EEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCS---H---HHHHHHHHHHHHHHHHHTSGGGTTTEEEESSGGGSC
T ss_pred EEEEEEeecCCccceEEEecCCCCCCCceeccccCCC---c---cHHHHHHHHHHHHHHHHhCcccCCccccccCCCccc
Confidence 4566667899999999999999999999999999999 8 9999999999999999987 5666555444332 1
Q ss_pred --CCCccc----CCC--CCCccccccCCCCCCCCCCCCC-CccCCCCCccCCCCcc
Q psy3407 359 --RSSYWN----NNS--DGTSKEACEMGKLGSSTPIKKH-SVITSNNNSLNLENIL 405 (749)
Q Consensus 359 --~~~~~~----~~~--~Gt~mGTcRMG~D~~~~p~Pkt-SVVD~~grsHD~~NL~ 405 (749)
..+.|. .+. ..|.+||||||.+ ++. +|||+++|.|+++||+
T Consensus 483 ~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~------~~~~~VVD~~lrV~Gv~~Lr 532 (566)
T 3fim_B 483 PTDDAAIESYIRDNANTIFHPVGTASMSPR------GASWGVVDPDLKVKGVDGLR 532 (566)
T ss_dssp TTCHHHHHHHHHHHCEECSCCBCTTCBCCT------TCSSCSBCTTCBBTTCBSEE
T ss_pred ccchHHHHHHHhhcccccccccCccccCCc------ccCCccCCCCCeEccCCCcE
Confidence 011111 111 1249999999998 576 9999999999999997
|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... | Back alignment and structure |
|---|
| >4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* | Back alignment and structure |
|---|
| >1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} | Back alignment and structure |
|---|
| >2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} | Back alignment and structure |
|---|
| >3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} | Back alignment and structure |
|---|
| >3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} | Back alignment and structure |
|---|
| >1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 | Back alignment and structure |
|---|
| >3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* | Back alignment and structure |
|---|
| >1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 | Back alignment and structure |
|---|
| >3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} | Back alignment and structure |
|---|
| >2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* | Back alignment and structure |
|---|
| >3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* | Back alignment and structure |
|---|
| >1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 749 | ||||
| d1gpea1 | 391 | c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic | 4e-33 | |
| d1cf3a1 | 385 | c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper | 9e-31 | |
| d1ju2a1 | 351 | c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { | 1e-25 | |
| d3coxa1 | 370 | c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of | 1e-19 | |
| d2f5va1 | 379 | c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W | 3e-19 | |
| d1n4wa1 | 367 | c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of | 1e-18 | |
| d1kdga1 | 360 | c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain | 1e-17 | |
| d1u5ea1 | 209 | b.55.1.1 (A:14-222) Src-associated adaptor protein | 6e-06 | |
| d1plsa_ | 113 | b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta | 1e-05 | |
| d1v5ma_ | 136 | b.55.1.1 (A:) SH2 and PH domain-containing adapter | 0.001 | |
| d1wg7a_ | 150 | b.55.1.1 (A:) Dedicator of cytokinesis protein 9, | 0.002 | |
| d1upqa_ | 107 | b.55.1.1 (A:) Phosphoinositol 3-phosphate binding | 0.002 | |
| d2i5fa1 | 104 | b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie | 0.004 | |
| d1fgya_ | 127 | b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1 | 0.004 |
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Score = 130 bits (326), Expect = 4e-33
Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDIS--------RQDAAFHNTGG 52
+ + + + G GW + ++ Y K+E + + +A H T G
Sbjct: 114 SWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNG 173
Query: 53 YLTVSPRLSPDETVKIIEAAGKELKIG----TMYDINRDQYIGFGPFDTTTRYGLRCSTS 108
+ R + I++A + + + +R +
Sbjct: 174 TVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAA 233
Query: 109 KAFLEPAKFRENLIILKNTEVIKILIDSK---LKAYGVEYINSQGKICHVNSTREVILSA 165
+A+L P R NL IL V K+L +A GV + ++ V + EV+L+A
Sbjct: 234 RAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAA 293
Query: 166 GAVGSPQLLMLSGIGIQKHLKEKNITVIKDLP--VGENLQDHV 206
G+ SP +L SGIG++ L + N+T + DLP + + +
Sbjct: 294 GSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSREL 336
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107 | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 | Back information, alignment and structure |
|---|
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1ju2a1 | 351 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 99.97 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 99.86 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 99.83 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 99.45 | |
| d1kdga2 | 181 | Flavoprotein domain of flavocytochrome cellobiose | 99.19 | |
| d1ju2a2 | 170 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 99.0 | |
| d2f5va2 | 198 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 98.92 | |
| d1cf3a2 | 196 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 98.89 | |
| d1gpea2 | 196 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 98.83 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 97.26 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 97.02 | |
| d1kf6a2 | 311 | Fumarate reductase {Escherichia coli [TaxId: 562]} | 96.69 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 96.4 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 96.23 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.13 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 94.82 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.1 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 93.85 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 93.67 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 93.46 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 93.32 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 93.2 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 92.53 | |
| d1chua2 | 305 | L-aspartate oxidase {Escherichia coli [TaxId: 562] | 92.19 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 91.84 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 91.75 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 91.43 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 91.21 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 91.16 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.73 | |
| d1neka2 | 330 | Succinate dehydogenase {Escherichia coli [TaxId: 5 | 89.64 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.61 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 89.18 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 89.16 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 88.94 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 88.47 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 88.17 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.1 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 87.11 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 86.78 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 86.74 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 86.53 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 86.0 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 85.84 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 85.35 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 85.15 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 84.08 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 83.83 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 83.68 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 82.66 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 81.6 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 81.55 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 81.54 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 80.45 |
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=1.3e-40 Score=357.34 Aligned_cols=208 Identities=25% Similarity=0.371 Sum_probs=182.5
Q ss_pred CEEEcCChhhhHHHHHc-CCCCCCccchHHHHHHhhcCCCCCCC---------CCCCCCCCCCcccCCCC---CCChHHH
Q psy3407 1 MLYQRGNDRDYNDWERA-GNPGWGFKHILPYFLKSEDFQDISRQ---------DAAFHNTGGYLTVSPRL---SPDETVK 67 (749)
Q Consensus 1 Miy~RGsp~DFD~Wa~l-G~~GWSYddLePYY~KaE~~~~gvsg---------~~~~hG~~GPl~V~~P~---~~~p~~~ 67 (749)
|+|+|+++.|||.|++. |+++|+|++++|||+|+|++ .++.. +...||..||+.+.++. ...++.+
T Consensus 113 ~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~p~~~ 191 (391)
T d1gpea1 113 DSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAA-RTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMK 191 (391)
T ss_dssp CEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEE-CCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCBCTHHH
T ss_pred eEEeeccccccccccccCCCCccccchhHHHHHHhhhc-cCCcchhcccccCccccccCCCCcccccccccccccCHHHH
Confidence 79999999999999876 88999999999999999998 65432 24578888998876543 5678999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCccccccccc-cCCCcccchhhhhhhhhccCCCeEEEcccEEEEEEeCC---CCcEEEE
Q psy3407 68 IIEAAGKELKIGTMYDINRDQYIGFGPFDTT-TRYGLRCSTSKAFLEPAKFRENLIILKNTEVIKILIDS---KLKAYGV 143 (749)
Q Consensus 68 ~f~~A~~eLG~~~~~D~N~g~~~G~~~c~~~-c~~GaR~Saa~ayL~pa~~r~NLtIlT~a~V~RIl~d~---ggrAtGV 143 (749)
.|.++++++|++...+++.+.+.+++.+..+ +..+.|.+++.+++.|++.|+|++|+|++.|+||+|++ +.||+||
T Consensus 192 ~~~~a~~~~G~~~~~~~~~g~~~~~~~~~~~~~~~~~r~s~a~~~~~p~~~r~nl~i~t~a~V~rIl~~~~~~g~ra~GV 271 (391)
T d1gpea1 192 ALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGV 271 (391)
T ss_dssp HHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHhcCCceeeccccCcccccccccceeeccccccchhhhccCccccchhhhhhccceeeEEeeeCCCCCceEEee
Confidence 9999999999999888888877666554433 45677888889999999999999999999999999972 3489999
Q ss_pred EEEecCCeEEEEEeccEEEEccCCCCChHHHhhcCCCccccccccCcceeecCC--CCCCcccccccc
Q psy3407 144 EYINSQGKICHVNSTREVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVIKDLP--VGENLQDHVCFP 209 (749)
Q Consensus 144 ~y~d~~G~~~~V~ArKeVILAAGAIeTPrLLL~SGIGpas~L~~~GIpvVaDLP--VGRNLqDHp~v~ 209 (749)
+|.+.+|.+++++|+||||||||||+||+|||+|||||+++|+++||++++|+| ||+|||||+...
T Consensus 272 ~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~v~dlP~Gvg~nl~dh~~~~ 339 (391)
T d1gpea1 272 NFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSRELGGV 339 (391)
T ss_dssp EEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCTCBSCGGGTCS
T ss_pred EEecCCCeEEEEEeCCEEEEecchhcchHHHHhcCCCcHHHHHHCCCCEEEECCcccccccccCccce
Confidence 998878888999999999999999999999999999999999999999999998 999999999764
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
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| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
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| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
| >d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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