Psyllid ID: psy3431

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------55
Protein Sequence
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGGPTVEEVD
Secondary Structure (PSIPRED)
ccEEEEEccccccEEEEEEccEEEEEEccccccccccEEEEccccccccHHHHHHHcccccccHHHHHHHcccccccHHHHHHccccccEEEccccccEEEEEEccEEEEEccccccHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHHHccccEEEEccHHHHHHHHHcccccccccEEEEEEEccccccccccEEcccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccEEEcccccEEEccccccccccEEEEEEcccccccEEEEEEEcccccccccccccccEEEccccccccccccEEEEEEEcccccEEEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccEEEEEEEEccEEEEcccccccccEEccEEEccccEEEcHHHHccccccHHHEEccHHHccccccccHHHHHHHHHcccEEEEEccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHccccccccccEEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHHcccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcc
Coil and Loop (DISEMBL)
mpaigidlgttYSCVAVFQQGKVEIIandqgnrttpsyvaftdteRLIGDaaknqvamnprntvfdakrligrkfddpkiqqdmkhwpftvvndrskpkiqvefkgerktfapeEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLdknlkgerNVLIFDlgggtfdvsilsidegalfevrstagdthlggedfdNRLVSHLAEEFKRKcrsasdvgdhhgDAHFVVQSLLQNffcgkslnlsinpdeAVAYGAAVQAAILsgdqssaiQDVLLVdvtplslgieTAGGVMTKLIerntripckqtqtfttyadnqpavtIQVFEgeramtkdnnllgtfdltgippaprgvpkidvtfdldangilnvtakdtssgksqnitikndkgrlsKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKwldnntladKEEYQDKLQQLQKSCMplmskmhggaggasagdmprggptveevd
Flexible Loop (DISEMBL)
mpaigidlgttYSCVAVFQQGKVEiiandqgnrttPSYVAFTDTERLIGDaaknqvamnprntvfdakrlIGRKfddpkiqqdmkhwpftvvndrskpkiqvefkgerktfapeeisSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQtqtfttyadnqpAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNvtakdtssgksqnitikndkgrlskeeIDRMINdaerykdedekqkERISARNNLEAYVFNVKQALDDAGNklteseksrcreeCDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAggasagdmprggptveevd
Low Complexity Region (SEG)
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEavaygaavqaaILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGGPTVEEVD
Disordered region (IsUnstruct)
***IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND************************MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVT****************************************************LEAYVFNVKQA*******************CDATLKWLDN**************************************************
Disordered Region (DISOPRED)
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR**************VVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY**********ISARNNLEAYVFNVKQA***************CREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMP****************************
Disordered Region (DISEMBL)
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAK********NITIKNDKGRLSKEEIDRMINDAER***********ISARNNLEAYVFNVKQALDDAGNK***********ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH**********************
Disordered Region (DISPRO)
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSxxxxxxxxxxxxxxxxxxxxxxxxxxxxNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLxxxxxxxxxxxxxxxxxxxxxCMPLMSKMHGGAGGASAGDMPRGGPTVEEVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	549	2.2.26 [Sep-21-2011]
Q24789	665	Heat shock cognate 70 kDa	N/A	N/A	0.996	0.822	0.553	0.0
Q07437	652	Heat shock 70 kDa protein	N/A	N/A	0.983	0.828	0.538	0.0
P18694	645	Heat shock 70 kDa protein	N/A	N/A	0.954	0.812	0.540	0.0
P17804	653	Heat shock 70 kDa protein	N/A	N/A	0.952	0.800	0.557	0.0
P05456	680	Heat shock 70 kDa protein	N/A	N/A	0.954	0.770	0.547	0.0
P09189	651	Heat shock cognate 70 kDa	N/A	N/A	0.998	0.841	0.548	0.0
Q54BE0	630	Heat shock cognate 70 kDa	yes	N/A	0.961	0.838	0.549	0.0
P22954	653	Probable mediator of RNA	yes	N/A	0.990	0.833	0.527	1e-180
P11145	661	Heat shock 70 kDa protein	N/A	N/A	0.954	0.792	0.544	1e-179
P11143	645	Heat shock 70 kDa protein	N/A	N/A	0.996	0.848	0.532	1e-174

>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/661 (55%), Positives = 447/661 (67%), Gaps = 114/661 (17%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTT+SCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 6   PAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 65

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q D+KHW F V+N   KPKI+VE++GE K F+ EEISSMVL
Sbjct: 66  NTVFDAKRLIGRRFDDRAVQDDIKHWAFKVINAGGKPKIEVEYRGETKCFSAEEISSMVL 125

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            KMKETAEAYLG  V D VI+VPAYFND+QRQATKDAG I+GLNV+RI+NEPTAAA+AYG
Sbjct: 126 LKMKETAEAYLGKKVSDTVISVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 185

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK ++ ERNVLIFDLGGGTFDVSILSI++G +FEV+STAGDTHLGGEDFD+RLV+H  E
Sbjct: 186 LDKKVERERNVLIFDLGGGTFDVSILSIEDG-IFEVKSTAGDTHLGGEDFDSRLVNHFVE 244

Query: 242 EFKRK-------------------CRSASDVGDHHGDAHFVVQSLLQ--NFF-------- 272
           EFKRK                   C  A         A+  + SLL+  +F+        
Sbjct: 245 EFKRKHKGKDLTTNKRAVRRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARF 304

Query: 273 ---CGKSLNLSINPDEAVAYGA-----AVQAAILSG------------------------ 300
              C      +++P E     A     AV   +L G                        
Sbjct: 305 EELCSDLFRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKS 364

Query: 301 --------------------DQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
                               D+S A+QD+LL+DV PLSLG+ETAGGVMT LI+RNT IP 
Sbjct: 365 INPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPT 424

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           KQTQTFTTY+DNQP V IQV+EGERAM +DNNLLG F+L+GIPP PRGVP+I+VTFD+DA
Sbjct: 425 KQTQTFTTYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDA 484

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           NGILNV+A D S+GK   ITI  DKGRLSKEEI+RM+NDAE++K EDEKQ++R++A+N L
Sbjct: 485 NGILNVSAVDKSTGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGL 544

Query: 461 EAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 518
           E+Y F++K  ++D     K+ ES++ R  E+C+ T+KWLD N  A+KEEY+ + ++L+  
Sbjct: 545 ESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESV 604

Query: 519 CMPLMSKMHGGA----------------------------GGASAGDMPRG--GPTVEEV 548
           C P+++KM+  A                             G  +GD   G  GPT+EEV
Sbjct: 605 CNPIIAKMYQEAGGVGGIPGGIPGGGMPGGTPGGGIPAGMAGGMSGDPSSGGRGPTIEEV 664

Query: 549 D 549
           D
Sbjct: 665 D 665

Echinococcus granulosus (taxid: 6210)

>sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/654 (53%), Positives = 427/654 (65%), Gaps = 114/654 (17%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N
Sbjct: 6   AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHN 65

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMVL 121
           TVFDAKRLIGRKF+D  +Q DMKHWPF V      KP I V+++GE KTF PE+ISSMVL
Sbjct: 66  TVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVL 125

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            KMKETAEAYLG  V+ AV+TVPAYFND+QRQATKDAG I+GL V+RI+NEPTAAA+AYG
Sbjct: 126 LKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEVLRIINEPTAAAIAYG 185

Query: 182 LDKNLKG-ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           LDK   G ERNVLIFDLGGGTFDV++L+ID G +FEV++T GDTHLGGEDFDNRLV+   
Sbjct: 186 LDKGDDGKERNVLIFDLGGGTFDVTLLTID-GGIFEVKATNGDTHLGGEDFDNRLVTFFT 244

Query: 241 EEFKRK-------------------CRSASDVGDHHGDAHFVVQSLLQNF---------- 271
           EEFKRK                   C  A         A   + +L  N           
Sbjct: 245 EEFKRKNKGKNLASSHRSLRRLRTACERAKRTLSSATQATIEIDALFDNVDFQATINRAR 304

Query: 272 ---FCGKSLNLSINPDEAVAYGA-----AVQAAILSGDQS-------------------- 303
               CG     +I P E V   A     +V   +L G  +                    
Sbjct: 305 FEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNK 364

Query: 304 -----------SAIQDVLL-------------VDVTPLSLGIETAGGVMTKLIERNTRIP 339
                      +A+Q  +L             +DVTPL+LGIETAGGVMT LI+RNT IP
Sbjct: 365 SINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIP 424

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K++Q F+TYADNQP V IQVFEGERAMTKD +LLGTFDL+GIPPAPRGVP+I+VTFDLD
Sbjct: 425 TKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLD 484

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+A++  +GK   ITI NDKGRLSK+EI+RM+NDA +Y+ +D+ Q +R+ A+N 
Sbjct: 485 ANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNG 544

Query: 460 LEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y +++K  L D+    KL +++KS   +E +A L+WL +N  A KEEY+ K ++L+ 
Sbjct: 545 LENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELEN 604

Query: 518 SCMPLMSKMHGG----------------------AGGASAGDMPRGGPTVEEVD 549
            C P+M+KM+                        AGGAS+      GP VEEVD
Sbjct: 605 VCNPIMTKMYQSMGGGAGGMAGMPDMSSMSGARPAGGASS------GPKVEEVD 652

Leishmania amazonensis (taxid: 5659)

>sp|P18694|HSP72_USTMA Heat shock 70 kDa protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMS2 PE=3 SV=2

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/607 (54%), Positives = 422/607 (69%), Gaps = 83/607 (13%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCVAV+Q  +VE+IANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N
Sbjct: 4   AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHN 63

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKFDD ++Q DMKHWPF V +   KP+I++E+KGE+KTF PEEISSMVL 
Sbjct: 64  TVFDAKRLIGRKFDDAEVQSDMKHWPFEVTSVGGKPQIRIEYKGEKKTFTPEEISSMVLL 123

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KM+ETAEAYLG +V+DAV+TVPAYFND+QRQATKDAG I+GLNVMRI+NEPTAAA+AYGL
Sbjct: 124 KMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNVMRIINEPTAAAIAYGL 183

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK  +GE+NVLIFDLGGGTFDVS+L+I+EG +FEV++TAGDTHLGGEDFDNRLV+H  +E
Sbjct: 184 DKKTEGEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRLVNHFVQE 242

Query: 243 FKRK------------------CRSASDVGDHHGDAHFVVQSLLQ--NFF---------- 272
           FKRK                  C  A             + SL +  +F+          
Sbjct: 243 FKRKNKKDLTTNARALRRLRTACERAKRTLSSAAQTTIEIDSLFEGIDFYTSITRARFEE 302

Query: 273 -CGKSLNLSINPDEAVAYGA-----AVQAAILSGDQS----------------------- 303
            CG   + +I P E V   +     +V   +L G  +                       
Sbjct: 303 LCGDLFSHTIEPVEKVLRDSKIDKGSVHEIVLVGGSTRIPKVQKLLTDFFNGRELNKSIN 362

Query: 304 --------SAIQDVLL-------------VDVTPLSLGIETAGGVMTKLIERNTRIPCKQ 342
                   +A+Q  +L             +DV PLS+GIETAGGV T LI+RNT +P K+
Sbjct: 363 PDEAVAYGAAVQAAILSGDTSEKTQDLLLLDVAPLSMGIETAGGVFTPLIKRNTTVPTKK 422

Query: 343 TQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANG 402
           ++ F+TYADNQP V IQVFEGERA TKDNNLLG F+L+GIPPAPRGVP+I+VTFD+DAN 
Sbjct: 423 SEIFSTYADNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDANA 482

Query: 403 ILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEA 462
           ILNV+A +  +GKS+ ITI+NDKGRLS E+I+ M+  AE++ +ED++  ER  A+N LE+
Sbjct: 483 ILNVSAAEKGTGKSEKITIRNDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLES 542

Query: 463 YVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCM 520
           Y++NV+   ++    +KL  ++K    +     ++WLD+NT A  +E +DK +++++   
Sbjct: 543 YIYNVRNTTNEPQLKDKLEAADKEALEKIVKEGIEWLDSNTTASTDELKDKQKEIEEQVN 602

Query: 521 PLMSKMH 527
           P+M+K++
Sbjct: 603 PIMTKIY 609

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/610 (55%), Positives = 414/610 (67%), Gaps = 87/610 (14%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV V+Q  +V+IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N
Sbjct: 6   AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHN 65

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMVL 121
           TVFDAKRLIGRKF+D  +Q DMKHWPF V      KP I V+++GE KTF PEEISSMVL
Sbjct: 66  TVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVL 125

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            KMKETAEAYLG  V+ AV+TVPAYFND+QRQATKDAG IAGL V+RI+NEPT  A+AYG
Sbjct: 126 LKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPT-RAIAYG 184

Query: 182 LDKNLKG-ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           LDK   G ERNVLIFDLGGGTFDVS+L+ID G +FEV++T GDTHLGGEDFDNRLV+   
Sbjct: 185 LDKGDDGKERNVLIFDLGGGTFDVSLLTID-GGIFEVKATNGDTHLGGEDFDNRLVTFFT 243

Query: 241 EEFKRKCRSASDVGDHHG-------------------DAHFVVQSLLQNF---------- 271
           EEFKRK +  +    H                      A   + +L +N           
Sbjct: 244 EEFKRKNKGKNLASSHRALRGLRTACERAKRTLSSATQATIEIDALFENVDFQATITRAR 303

Query: 272 ---FCGKSLNLSINPDEAVAYGA-----AVQAAILSGDQS-------------------- 303
               CG     +I P E V   A     +V   +L G  +                    
Sbjct: 304 FEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNK 363

Query: 304 -----------SAIQDVL-------------LVDVTPLSLGIETAGGVMTKLIERNTRIP 339
                      +A+Q  +             L+DVTPL+LGIETAGGVMT LI+RNT IP
Sbjct: 364 SINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIP 423

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K++Q F+TYADNQP V IQVFEGERAMTKD +LLGTFDL+GIPPAPRGVP+I+VTFDLD
Sbjct: 424 TKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLD 483

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+A++  +GK   ITI NDKGRLSK+EI+RM+NDA +Y+ +D  Q++R+ A+N 
Sbjct: 484 ANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNG 543

Query: 460 LEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y +++K  L D+    KL +S+K+   +E D TL+WL +N  A KEEY+ K ++L+ 
Sbjct: 544 LENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELES 603

Query: 518 SCMPLMSKMH 527
            C P+M+KM+
Sbjct: 604 VCNPIMTKMY 613

Leishmania donovani (taxid: 5661)

>sp|P05456|HSP70_TRYCR Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/610 (54%), Positives = 410/610 (67%), Gaps = 86/610 (14%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPRN
Sbjct: 6   AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPRN 65

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMVL 121
           TVFDAKRLIGRKF DP +Q DMKHWPF V+     KP IQV+F+GE KTF PEE+SSMVL
Sbjct: 66  TVFDAKRLIGRKFSDPVVQSDMKHWPFKVITKGDDKPVIQVQFRGETKTFNPEEVSSMVL 125

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           +KMKE AE+YLG  V+ AV+TVPAYFND+QRQATKDAG IAGL V+RI+NEPTAAA+AYG
Sbjct: 126 SKMKEIAESYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYG 185

Query: 182 LDKNLKG-ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           LDK   G ERNVLIFDLGGGTFDV++L+ID G +FEV++T GDTHLGGEDFDNRLV+H  
Sbjct: 186 LDKVEDGKERNVLIFDLGGGTFDVTLLTID-GGIFEVKATNGDTHLGGEDFDNRLVAHFT 244

Query: 241 EEFKRK-------------------CRSASDVGDHHGDAHFVVQSLLQNF---------- 271
           +EFKRK                   C  A         A   + +L  N           
Sbjct: 245 DEFKRKNKGKDLSTNLRALRRLRTACERAKRTLSSAAQATIEIDALFDNVDFQATITRAR 304

Query: 272 ---FCGKSLNLSINPDEAVAYGA-----AVQAAILSG----------------------- 300
               CG+    ++ P E V   A     AV   +L G                       
Sbjct: 305 FEELCGELFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFRGKELKK 364

Query: 301 ---------------------DQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP 339
                                 +S   + +LL+DVTPL+LGIETAGGVMT LI+RNT IP
Sbjct: 365 SIQPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTSLIKRNTTIP 424

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K++Q F+TYADNQP V IQVFEGERAMTKD +LLGTF+L+GIPP PRGVP+I+VTFDLD
Sbjct: 425 TKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRGVPQIEVTFDLD 484

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+A++  +GK   I + NDKGRLS+ EI+RM+ +A +Y+ ED+ Q  +I A+N 
Sbjct: 485 ANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNG 544

Query: 460 LEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y F++K A++D     K+ E++K       +  L+WL+NN  A KEEY+ + ++L+ 
Sbjct: 545 LENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELEN 604

Query: 518 SCMPLMSKMH 527
            C P+M+ M+
Sbjct: 605 LCTPIMTNMY 614

Trypanosoma cruzi (taxid: 5693)

>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/644 (54%), Positives = 430/644 (66%), Gaps = 96/644 (14%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP 
Sbjct: 8   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPI 67

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDRSKPKIQVEFKGERKTFAPEEISSMV 120
           NTVFDAKRLIGR+F DP +Q D+K WPF V+     KP I V +KGE K FA EEISSMV
Sbjct: 68  NTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMV 127

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMKE AEAYLG ++++AV+TVPAYFND+QRQATKDAG IAGLNVMRI+NEPTAAA+AY
Sbjct: 128 LTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAY 187

Query: 181 GLDKNLK--GERNVLI-------FD---------------------LGGGTFDVSI---- 206
           GLDK     GE+NVLI       FD                     LGG  FD  +    
Sbjct: 188 GLDKKASSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 247

Query: 207 -----------LSIDEGALFEVR-----------STAG-----DTHLGGEDFDNRLVSHL 239
                      +S +  AL  +R           STA      D+   G DF + +    
Sbjct: 248 VQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRAR 307

Query: 240 AEEFK----RKC-----RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNL 279
            EE      RKC     +   D        H VV           Q LLQ+FF GK L  
Sbjct: 308 FEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK 367

Query: 280 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP 339
           SINPDEAVAYGAAVQAAILSG+ +  +QD+LL+DVTPLSLG+ETAGG MT LI RNT IP
Sbjct: 368 SINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGGMTVLIPRNTTIP 427

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K+ Q F+TY+DNQP V IQV+EGERA TKDNNLLG F+L+GIPPAPRGVP+I V FD+D
Sbjct: 428 TKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDID 487

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+A+D ++G+   ITI NDKGRLSKEEI+RM+ +AE+YK EDE+ K+++ A+N 
Sbjct: 488 ANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNA 547

Query: 460 LEAYVFNVKQAL--DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y +N++  +  D   ++L+ ++K R  +  D  +KWLDNN LA+ +E++DK+++L+ 
Sbjct: 548 LENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELES 607

Query: 518 SCMPLMSKMH-GGAGGA-----------SAGDMPRGGPTVEEVD 549
            C P+++KM+ GGAGGA           SAG     GP +EEVD
Sbjct: 608 ICNPIIAKMYQGGAGGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651

Petunia hybrida (taxid: 4102)

>sp|Q54BE0|HS7C3_DICDI Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/615 (54%), Positives = 424/615 (68%), Gaps = 87/615 (14%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           M +IGIDLGTTYSCV V+   +VEIIANDQGNRTTPSYVAF DTERLIGDAAKNQVAMNP
Sbjct: 1   MTSIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRS--KPKIQVEFKGERKTFAPEEISS 118
            NTVFDAKRLIGRKF D  +Q DMKHWPF V+ +++  KP IQV+FKGE KTF+PEEISS
Sbjct: 61  INTVFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISS 120

Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
           MVL+KMKETAE+YLG  V +AVITVPAYFND QRQATKDAG I+ LNV RI+NEP+AAA+
Sbjct: 121 MVLSKMKETAESYLGKPVNNAVITVPAYFNDGQRQATKDAGTISKLNVQRIINEPSAAAI 180

Query: 179 AYGLDK--NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236
           AYGLDK  +  GE  VLIFDLGGGTFDVS+LSID+G +FEV +TAGDTHLGGEDFDNRLV
Sbjct: 181 AYGLDKKGSKSGEIKVLIFDLGGGTFDVSLLSIDDG-VFEVLATAGDTHLGGEDFDNRLV 239

Query: 237 SHLAEEFKRK------------------CRSASDVGDHHGDAHFVVQSLLQ--NFF---- 272
           +H  +EFKRK                  C  A         A   + SL    +F+    
Sbjct: 240 NHFVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEIDSLYDGIDFYTSIT 299

Query: 273 -------CGKSLNLSINP---------------DEAVAYGAA-----VQAAI-------- 297
                  C    N  I P               DE V  G +     VQ  I        
Sbjct: 300 RARFEELCSDLFNNCIEPVEKVLKDCKLDKKSIDEIVLVGGSTRIPKVQQLIQNLFNGKE 359

Query: 298 ----LSGDQS----SAIQDVLL-------------VDVTPLSLGIETAGGVMTKLIERNT 336
               ++ D++    +A+Q  +L             +DV PLSLGIET GGVMT ++ RNT
Sbjct: 360 LNKSINPDEAVAYGAAVQAAILSGDKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNT 419

Query: 337 RIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTF 396
            IPCK+TQTF+T+ DNQ  V IQV+EGER MTKDNNLLG F+LTGIPPAPRG P+I+V+F
Sbjct: 420 IIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSF 479

Query: 397 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISA 456
           D+D+NGILNVTA+D ++ K + ITI NDKGRLS ++I +M+ DAE++K++D++QKERI +
Sbjct: 480 DVDSNGILNVTAEDKTTKKVEKITITNDKGRLSLKDITKMVEDAEKFKEQDQQQKERIES 539

Query: 457 RNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQ 514
           +NNLE Y+F+VK +++D    +KL++S+K+    E ++TLKWL++N  A+K+E+  K+  
Sbjct: 540 KNNLENYIFSVKNSINDQKIISKLSKSDKNIIESETESTLKWLESNQSAEKDEFNQKISD 599

Query: 515 LQKSCMPLMSKMHGG 529
           L+    P++SK + G
Sbjct: 600 LESIVNPILSKFYQG 614

May function in protein folding and assembly, and disassembly of protein complexes.

Dictyostelium discoideum (taxid: 44689)

>sp|P22954|MD37D_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37D PE=1 SV=2

 Score =  632 bits (1630), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 343/650 (52%), Positives = 427/650 (65%), Gaps = 106/650 (16%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP 
Sbjct: 8   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPV 67

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRS-KPKIQVEFKGERKTFAPEEISSMV 120
           NTVFDAKRLIGR+F D  +Q D + WPFT+++  + KP I VE+KGE K FA EEISSMV
Sbjct: 68  NTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMV 127

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KM+E AEA+LG +V++AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AY
Sbjct: 128 LIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAY 187

Query: 181 GLDKNLK--GERNVLIFDLGG------------GTFDVSILSID---------------- 210
           GLDK     GE+NVLIFDLGG            G F+V   + D                
Sbjct: 188 GLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 247

Query: 211 --------------------------EGALFEVRSTAG-----DTHLGGEDFDNRLVSHL 239
                                     E A   + STA      D+  GG DF + +    
Sbjct: 248 VQEFKRKNKQDITGQPRALRRLRTACERAKRTLSSTAQTTIEIDSLYGGADFYSPITRAR 307

Query: 240 AEEFK----RKC-----RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNL 279
            EE      RKC     +   D        H +V           Q LLQ+FF GK L  
Sbjct: 308 FEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCK 367

Query: 280 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP 339
           SINPDEAVAYGAAVQAAILSG+ +  +QD+LL+DVTPLSLG+ETAGGVMT LI+RNT IP
Sbjct: 368 SINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIP 427

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K+ Q F+TY+DNQP V IQVFEGERA TKDNNLLG F+L+GIPPAPRGVP+I V FD+D
Sbjct: 428 TKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDID 487

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+A+D ++GK   ITI NDKGRLSKE+I++M+ +AE+YK EDE+ K+++ A+N 
Sbjct: 488 ANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNA 547

Query: 460 LEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y +N++  + D   G KL  ++K +  +  +  ++WLD N L + +E++DK+++L+ 
Sbjct: 548 LENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELES 607

Query: 518 SCMPLMSKMHGG------------------AGGASAGDMPRGGPTVEEVD 549
            C P+++KM+ G                  A  AS G     GP +EEVD
Sbjct: 608 VCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGG----AGPKIEEVD 653

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.

Arabidopsis thaliana (taxid: 3702)

>sp|P11145|HSP74_TRYBB Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2

 Score =  630 bits (1624), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 332/610 (54%), Positives = 404/610 (66%), Gaps = 86/610 (14%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N
Sbjct: 6   AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTN 65

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMVL 121
           TVFDAKRLIGRKF D  +Q DMKHWPF VV     KP IQV+F+GE KTF PEEISSMVL
Sbjct: 66  TVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVL 125

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            KMKE AE+YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V+RI+NEPTAAA+AYG
Sbjct: 126 LKMKEVAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYG 185

Query: 182 LDKNLKG-ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           LDK  +G ERNVLIFDLGGGTFDV++L+ID G +FEV++T GDTHLGGEDFDNRLV+H  
Sbjct: 186 LDKADEGKERNVLIFDLGGGTFDVTLLTID-GGIFEVKATNGDTHLGGEDFDNRLVAHFT 244

Query: 241 EEFKRK-------------------CRSASDVGDHHGDAHFVVQSLLQNF---------- 271
           EEFKRK                   C  A         A   + +L +N           
Sbjct: 245 EEFKRKNKGKDLSSNLRALRRLRTACERAKRTLSSAAQATIEIDALFENIDFQATITRAR 304

Query: 272 ---FCGKSLNLSINPDEAVAYGA-----AVQAAILSG----------------------- 300
               CG     ++ P E V   A     AV   +L G                       
Sbjct: 305 FEELCGDLFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFGGKELNK 364

Query: 301 ---------------------DQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP 339
                                 +S   + +LL+DV PL+LGIETAGGVMT LI+RNT IP
Sbjct: 365 SINPDEAVXYGAAVQAFILTGGKSKQTEGLLLLDVAPLTLGIETAGGVMTALIKRNTTIP 424

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
            K++Q F+TY+DNQP V IQVFEGER MTKD +LLGTFDL+GIPPAPRGVP+I+VTFDLD
Sbjct: 425 TKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLD 484

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGIL+V+A++  +GK   I I NDKGRLSK +I+RM++DA +Y+ ED+     I A+N 
Sbjct: 485 ANGILSVSAEEKGTGKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNG 544

Query: 460 LEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE Y F++K  ++D     KL +++K+      +  L+WL++N  A  EEY  + ++L+ 
Sbjct: 545 LENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEG 604

Query: 518 SCMPLMSKMH 527
            C P++SKM+
Sbjct: 605 VCAPILSKMY 614

Trypanosoma brucei brucei (taxid: 5702)

>sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2

 Score =  611 bits (1575), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 341/640 (53%), Positives = 412/640 (64%), Gaps = 93/640 (14%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV V+Q  +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 7   PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 66

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+F  P +Q  MK WP   +    KP I   +KGE K FA EEISSMVL
Sbjct: 67  NTVFDAKRLIGRRFSSPAVQSSMKLWPSRHLGLGDKPMIVFNYKGEEKQFAAEEISSMVL 126

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            KMKE AEAYLG ++++AV+TVPAYFND+QRQATKDAG IAGLNVMRI+NEPTAAA+AYG
Sbjct: 127 IKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 186

Query: 182 LDKNL--KGERNVLIFD----------------------------LGGGTFDVSI----- 206
           LDK     GE+NVLIFD                            LGG  FD  +     
Sbjct: 187 LDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFV 246

Query: 207 ----------LSIDEGALFEVR-----------STAG-----DTHLGGEDFDNRLVSHLA 240
                     +S +  AL  +R           STA      D+   G DF  R      
Sbjct: 247 QEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFTPRSSRARF 306

Query: 241 EEFK----RKC---------------RSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSI 281
           EE      RKC                S  DV    G         LQ+FF GK L  SI
Sbjct: 307 EELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLQDFFNGKELCKSI 366

Query: 282 NPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCK 341
           NPDEAVAYGAAVQAAILSG+ +    D+LL+DVTPLSLG+ETAGGVMT LI RNT IP K
Sbjct: 367 NPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTK 425

Query: 342 QTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 401
           + Q F+TY+DNQP V IQV+EGERA TKDNNLLG F+L+GIPPAPRGVP+I VTFD+D N
Sbjct: 426 KEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVN 485

Query: 402 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461
            ILNV+A+D ++G+   ITI NDKGRLSKEEI++M+ +AE+YK EDE+ K+++ A+N LE
Sbjct: 486 NILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALE 545

Query: 462 AYVFNVKQAL--DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSC 519
            Y +N++  +  D   +KL   +K +  +  D  + WLD+N LA+ EE++DK+++L+  C
Sbjct: 546 NYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGIC 605

Query: 520 MPLMSKMHGGAGGASAG------DMPRG----GPTVEEVD 549
            P+++KM+ G G           D P G    GP +EEVD
Sbjct: 606 NPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	549
195166142	601	GL27320 [Drosophila persimilis] gi|19410	1.0	0.913	0.700	0.0
195500276	524	GE24569 [Drosophila yakuba] gi|194183405	0.918	0.961	0.708	0.0
402235127	629	Hsp69 [Plutella xylostella]	0.996	0.869	0.657	0.0
297718725	634	heat shock protein 70 [Antheraea pernyi]	1.0	0.865	0.651	0.0
193659582	641	PREDICTED: heat shock protein 70 B2-like	0.994	0.851	0.656	0.0
47232576	634	heat shock protein Hsp70 [Antheraea yama	1.0	0.865	0.651	0.0
195500516	516	GE26203 [Drosophila yakuba] gi|194183508	0.901	0.959	0.684	0.0
300253412	639	heat shock protein 70-p3 [Oxycera pardal	0.998	0.857	0.640	0.0
312376960	631	hypothetical protein AND_11878 [Anophele	1.0	0.870	0.654	0.0
328813889	647	heat shock protein 70 [Microdera dzhunga	0.998	0.846	0.637	0.0

>gi|195166142|ref|XP_002023894.1| GL27320 [Drosophila persimilis] gi|194106054|gb|EDW28097.1| GL27320 [Drosophila persimilis]

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/601 (70%), Positives = 488/601 (81%), Gaps = 52/601 (8%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYV FT++ERLIGDAAKNQVAMNP
Sbjct: 1   MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVGFTESERLIGDAAKNQVAMNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
           +NTVFDAKRLIGR++DDPKI +D+KHWPF VV+D  KPKI VEFKGE K F+PEEISSMV
Sbjct: 61  KNTVFDAKRLIGRRYDDPKIAEDIKHWPFKVVSDGGKPKIGVEFKGEAKRFSPEEISSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKETAEAYLG ++ DAVITVPAYFND+QRQATKDAG IAGLNV+RIVNEPTAAALAY
Sbjct: 121 LVKMKETAEAYLGQTITDAVITVPAYFNDSQRQATKDAGRIAGLNVLRIVNEPTAAALAY 180

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVR+TAGDTHLGGEDFDNRLV+HLA
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRLVTHLA 240

Query: 241 EEFKRK--------------CRSASDVGDH----HGDAHFVVQSLLQ------------- 269
           +EFKRK               R+A++          +A   + +L +             
Sbjct: 241 DEFKRKFKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGHDYYTKMSRARR 300

Query: 270 ---------NFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLG 320
                    +FF GKSLNLSINPDEAVAYGAAVQAAILSGDQS  IQDVLLVDV PLSLG
Sbjct: 301 DCARLSDTCSFFNGKSLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLG 360

Query: 321 IETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLT 380
           IETAGGVMTKLIERN RIP KQT+TF+TYADNQP V+IQVFEGERAMTKDNN LGTF+L+
Sbjct: 361 IETAGGVMTKLIERNCRIPSKQTKTFSTYADNQPGVSIQVFEGERAMTKDNNALGTFELS 420

Query: 381 GIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDA 440
           GIPPAPRGVP+I+VTFDLDANGILNVTAK+ S+GK++NITI+NDKGRLS+ +IDRM+N+A
Sbjct: 421 GIPPAPRGVPQIEVTFDLDANGILNVTAKEMSTGKAKNITIQNDKGRLSQADIDRMVNEA 480

Query: 441 ERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG-NKLTESEKSRCREECDATLKWLDN 499
           ERY DEDEKQ++R+S+RN+LE YVFNVKQA++ AG +KL+E++K+   E+C+ T+KWLD 
Sbjct: 481 ERYSDEDEKQRQRVSSRNSLEGYVFNVKQAVEQAGSDKLSEADKASVLEKCNETIKWLDM 540

Query: 500 NTLADKEEYQDKLQQLQKSCMPLMSKMH-----------GGAGGASAGDMPRGGPTVEEV 548
           NT A+KEE+  K+++L K C P+M+K+H              G  + G     GPTVEEV
Sbjct: 541 NTTAEKEEFDHKMEELTKHCSPIMTKIHQQGAAAGPAAGANCGQQAGGFGGFSGPTVEEV 600

Query: 549 D 549
           D
Sbjct: 601 D 601

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195500276|ref|XP_002097304.1| GE24569 [Drosophila yakuba] gi|194183405|gb|EDW97016.1| GE24569 [Drosophila yakuba]

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/569 (70%), Positives = 457/569 (80%), Gaps = 65/569 (11%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct: 1   MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
           RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct: 61  RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct: 121 LAKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+ LA
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTLLA 240

Query: 241 EEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 300
           E    K                                       AVAYGAAVQAAILSG
Sbjct: 241 ESSSAK--------------------------------------RAVAYGAAVQAAILSG 262

Query: 301 DQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQV 360
           DQS  IQDVLLVDV PLSLGIETAGGVMTKLIERN RIPCKQT+TF+TY+DNQP V+IQV
Sbjct: 263 DQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQV 322

Query: 361 FEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNIT 420
           +EGERAMTKDNN LGTFDL+GIPPAPRGVP+I+VTFD+DANGILNV+AK+ S+GK++NIT
Sbjct: 323 YEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDMDANGILNVSAKEMSTGKAKNIT 382

Query: 421 IKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDA-GNKLT 479
           IKNDKGRLS+ EIDRM+N+AE+Y DEDEKQ++ I++RN LE+YVFNVKQA++ A   KL 
Sbjct: 383 IKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQCITSRNALESYVFNVKQAVEQAPAGKLD 442

Query: 480 ESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH------------ 527
           E++K+   ++C+ T++WLD+NT A+K+E+  KLQ+L + C P+M+KMH            
Sbjct: 443 EADKNFVLDKCNDTIRWLDSNTTAEKDEFDHKLQELTRHCSPIMTKMHQQGAGAGAGGPG 502

Query: 528 -------GGAGGASAGDMPRGGPTVEEVD 549
                  GG GG S       GPTVEEVD
Sbjct: 503 ANCGQQAGGFGGYS-------GPTVEEVD 524

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|402235127|gb|AFQ37587.1| Hsp69 [Plutella xylostella]

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/631 (65%), Positives = 477/631 (75%), Gaps = 84/631 (13%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q G VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVA+NP
Sbjct: 1   MPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVALNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NTVFDAKRLIGRKFDDPKIQ DMKHWPF V++D  KPKIQVEFKGE K FAPEE+SSMV
Sbjct: 61  SNTVFDAKRLIGRKFDDPKIQADMKHWPFKVISDGGKPKIQVEFKGEVKKFAPEEVSSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKM+ETAEAYLG SV+DAVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAALAY
Sbjct: 121 LTKMRETAEAYLGTSVKDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLI-------FD----------------------LGGGTFDVSILS--I 209
           GLDKNLKGERNVLI       FD                      LGG  FD  +++   
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSVLTIDEGALFEVRSTAGDTHLGGEDFDNRLVNHLA 240

Query: 210 DE-------------GALFEVRSTAG----------------DTHLGGEDFDNRLVSHLA 240
           DE              AL  +R+ A                 D    GEDF  R+     
Sbjct: 241 DEFKRKYKKDLRQSPRALRRLRTAAERAKRTLSSSTEATIEVDALYDGEDFYTRVSRARF 300

Query: 241 EEFKRKC---------RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLS 280
           EE              ++  D        H VV           QSLLQN FCGK LNLS
Sbjct: 301 EELNADLFRGTLEPVEKALKDAKLDKSQIHDVVLVGGSTRIPKIQSLLQNLFCGKKLNLS 360

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           INPDEAVAYGAAVQAAILSG   + IQDVLLVDV PLSLGIETAGGVMTK+IERN++IPC
Sbjct: 361 INPDEAVAYGAAVQAAILSGSTDARIQDVLLVDVAPLSLGIETAGGVMTKIIERNSKIPC 420

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           KQ+QTFTTY+DNQPAVTIQV+EGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD+DA
Sbjct: 421 KQSQTFTTYSDNQPAVTIQVYEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDMDA 480

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           NGILNV+AK+ SSG+++NI IKNDKGRLS+ EIDRM+ DAERY+DED+KQ++R++ARN L
Sbjct: 481 NGILNVSAKENSSGRTKNIVIKNDKGRLSQAEIDRMLADAERYRDEDDKQRQRVAARNQL 540

Query: 461 EAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCM 520
           E+YVF+V+QALDDAG+KL++S+K+  R+EC+  LKWLDNNTLA+++EY+ +L+++Q+ C 
Sbjct: 541 ESYVFSVRQALDDAGDKLSDSDKTAARKECEDALKWLDNNTLAEQDEYEHRLKEVQRVCS 600

Query: 521 PLMSKMHG-GAGGASAGDMPRG-GPTVEEVD 549
           P+MSKMHG GA G + G  P+G GPTVEEVD
Sbjct: 601 PIMSKMHGAGAAGMNPG--PQGQGPTVEEVD 629

Source: Plutella xylostella

Species: Plutella xylostella

Genus: Plutella

Family: Plutellidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|297718725|gb|ADI50267.1| heat shock protein 70 [Antheraea pernyi]

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/634 (65%), Positives = 469/634 (73%), Gaps = 85/634 (13%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q G VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP
Sbjct: 1   MPAIGIDLGTTYSCVGVWQHGGVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NTVFDAKRLIGRKFDD KIQQDMKHWPF VVND  KPKIQ+EFKGE K FAPEE+SSMV
Sbjct: 61  SNTVFDAKRLIGRKFDDQKIQQDMKHWPFKVVNDGGKPKIQIEFKGEAKKFAPEEVSSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMK+TAEAYLG +VRDAVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAALAY
Sbjct: 121 LTKMKDTAEAYLGTTVRDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLIFD-----------------------------LGGGTFDVSI----- 206
           GLDKNLKGERNVLIFD                             LGG  FD  +     
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHLA 240

Query: 207 ----------LSIDEGALFEVRSTAG----------------DTHLGGEDFDNRLVSHLA 240
                     L ++  AL  +R+ A                 D    G DF  R+     
Sbjct: 241 EEFKRKYKKDLRMNPRALRRLRTAAERAKRTLSSSTEATIEIDALYEGIDFYTRVSRARF 300

Query: 241 EEFKRKC---------RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLS 280
           EE              ++  D     G  H VV           QSLLQNFFCGK LNLS
Sbjct: 301 EELNADLFRGTLEPVEKALKDAKLDKGQIHDVVLVGGSTRIPKVQSLLQNFFCGKKLNLS 360

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           INPDEAVAYGAAVQAAILSG+  S IQDVLLVDV PLSLGIETAGGVMTK++ERN++IPC
Sbjct: 361 INPDEAVAYGAAVQAAILSGETDSKIQDVLLVDVAPLSLGIETAGGVMTKIVERNSKIPC 420

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           KQ+QTFTTY+DNQPAVTIQV+EGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD+DA
Sbjct: 421 KQSQTFTTYSDNQPAVTIQVYEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDMDA 480

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
            GILNV+AK+ S+G+S+NI IKNDKGRLS+ EIDRM+++AE+YK++DEKQ++R+++RN L
Sbjct: 481 IGILNVSAKENSTGRSKNIVIKNDKGRLSQSEIDRMLSEAEKYKEDDEKQRQRVASRNQL 540

Query: 461 EAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCM 520
           EAYVF+V+QALDDAGNKLT+ +KS  R  CD  L+WLDNNTLA+KEEY  KL+++Q+ C 
Sbjct: 541 EAYVFSVRQALDDAGNKLTDEDKSTARNACDEALRWLDNNTLAEKEEYDHKLKEVQRICS 600

Query: 521 PLMSKMHGGAGGASAGD-----MPRGGPTVEEVD 549
           P+M+KMHGG              P+ GPTVEEVD
Sbjct: 601 PVMTKMHGGGAAGGTPGGAPGYQPKDGPTVEEVD 634

Source: Antheraea pernyi

Species: Antheraea pernyi

Genus: Antheraea

Family: Saturniidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193659582|ref|XP_001949661.1| PREDICTED: heat shock protein 70 B2-like [Acyrthosiphon pisum]

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/637 (65%), Positives = 474/637 (74%), Gaps = 91/637 (14%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP N
Sbjct: 6   AIGIDLGTTYSCVGVWQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPVN 65

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGR+FDD K Q D+KHWPFTV++D  KPKIQVEFKGERK FAPEEISSMVLT
Sbjct: 66  TVFDAKRLIGRRFDDDKTQADIKHWPFTVISDGGKPKIQVEFKGERKVFAPEEISSMVLT 125

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG +V DAVITVPAYFND+QRQATKDAG IAGLNVMRI+NEPTAAALAYGL
Sbjct: 126 KMKEIAEAYLGRNVTDAVITVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGL 185

Query: 183 DKNLKGERNVLIFD-----------------------------LGGGTFDVSILS----- 208
           DKNLKGERNVLIFD                             LGG  FD  ++S     
Sbjct: 186 DKNLKGERNVLIFDLGGGTFDVSILQIDEGSIFEVKSTAGDTHLGGEDFDNRLVSHLADE 245

Query: 209 ----------IDEGALFEVRSTAG----------------DTHLGGEDFDNRLVSHLAEE 242
                      +  AL  +R+ A                 D  + G DF  R+     EE
Sbjct: 246 FKRKTKKDVRANPRALRRLRTAAERAKRTLSSSSEATLEIDALVDGIDFYTRVSRARFEE 305

Query: 243 -----FKRKC----RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLSIN 282
                F+       ++ +D     GD   VV           QSLLQNFFCGK LNLSIN
Sbjct: 306 LCADLFRSTLQPVEKALADAKLDKGDIQDVVLVGGSTRIPKIQSLLQNFFCGKPLNLSIN 365

Query: 283 PDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQ 342
           PDEAVAYGAAVQAAILSGD SSAIQDVLLVDVTPLSLGIETAGGVMTK++ERN+ IPCKQ
Sbjct: 366 PDEAVAYGAAVQAAILSGDTSSAIQDVLLVDVTPLSLGIETAGGVMTKIVERNSTIPCKQ 425

Query: 343 TQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANG 402
           TQTFTTYADNQPAVT+QVFEGERA+TKDNNLLGTF+LTGIPPA RGVPKI+VTFD+DANG
Sbjct: 426 TQTFTTYADNQPAVTVQVFEGERALTKDNNLLGTFNLTGIPPAARGVPKIEVTFDMDANG 485

Query: 403 ILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEA 462
           ILNV+AKD SSG+S+NI IKNDKGRLS+ EIDRM+++AERYK+EDE+QK +I+A+N LE+
Sbjct: 486 ILNVSAKDNSSGRSKNIVIKNDKGRLSQAEIDRMLSEAERYKEEDERQKVKIAAKNQLES 545

Query: 463 YVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 522
           YVF VKQALD+AG+KLTESEK+  ++EC+A ++WLD+N LA+KEEY+ KL+++Q SC  L
Sbjct: 546 YVFGVKQALDEAGDKLTESEKNAVKKECEAVIQWLDSNQLAEKEEYEFKLKEIQNSCSAL 605

Query: 523 MSKMHGGAGGASAGDMPRG----------GPTVEEVD 549
           M K+H GAG   A + P G          GPTVEEVD
Sbjct: 606 MLKIH-GAGQPGATNAPPGANGFPGACPRGPTVEEVD 641

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47232576|dbj|BAD18974.1| heat shock protein Hsp70 [Antheraea yamamai]

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/634 (65%), Positives = 468/634 (73%), Gaps = 85/634 (13%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q G VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP
Sbjct: 1   MPAIGIDLGTTYSCVGVWQHGGVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NTVFDAKRLIGRKFDD KIQQDMKHWPF VVND  KPKIQVEFKGE K FAPEEISSMV
Sbjct: 61  SNTVFDAKRLIGRKFDDQKIQQDMKHWPFKVVNDCGKPKIQVEFKGEAKKFAPEEISSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMK+TAEAYLG +VRDAVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAALAY
Sbjct: 121 LTKMKDTAEAYLGTTVRDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLIFD-----------------------------LGGGTFDVSI----- 206
           GLDKNLKGERNVLIFD                             LGG  FD  +     
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHLA 240

Query: 207 ----------LSIDEGALFEVRSTAG----------------DTHLGGEDFDNRLVSHLA 240
                     L ++  AL  +R+ A                 D    G DF  R+     
Sbjct: 241 EEFNRKYKKDLRMNPRALRRLRTAAERAKRTLSSSTEATIEIDALYEGIDFYTRVSRARF 300

Query: 241 EEFKRKC---------RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLS 280
           EE              ++  D     G  H VV           QSLLQNFFCGK LNLS
Sbjct: 301 EELNADLFRGTLEPVEKALKDAKLDKGQIHDVVLVGGSTRIPKVQSLLQNFFCGKKLNLS 360

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           INPDEAVA  AAVQAAILSG+  S IQDVLLVDV PLSLGIETAGGVMTK++ERN++IPC
Sbjct: 361 INPDEAVALRAAVQAAILSGETDSKIQDVLLVDVAPLSLGIETAGGVMTKIVERNSKIPC 420

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           KQ+QTFTTY+DNQPAVTIQV+EGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD+DA
Sbjct: 421 KQSQTFTTYSDNQPAVTIQVYEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDMDA 480

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           NGILNV+AK+ S+G+S+NI IKNDKGRLS+ EIDRM+++AE+YK+EDEKQ++R+++RN L
Sbjct: 481 NGILNVSAKENSTGRSKNIVIKNDKGRLSQAEIDRMLSEAEKYKEEDEKQRQRVASRNQL 540

Query: 461 EAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCM 520
           EAYVF+V+QALDDAGNKLT+++KS  R  CD  L+WLDNNTLA++EEY  KL+++Q+   
Sbjct: 541 EAYVFSVRQALDDAGNKLTDADKSTARNACDEALRWLDNNTLAEQEEYDHKLKEVQRIRS 600

Query: 521 PLMSKMHGGAGGASAGD-----MPRGGPTVEEVD 549
           P+M+KMHGG              P+ GPTVEEVD
Sbjct: 601 PVMTKMHGGGAAGGTPGGAPGYQPKDGPTVEEVD 634

Source: Antheraea yamamai

Species: Antheraea yamamai

Genus: Antheraea

Family: Saturniidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195500516|ref|XP_002097407.1| GE26203 [Drosophila yakuba] gi|194183508|gb|EDW97119.1| GE26203 [Drosophila yakuba]

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/570 (68%), Positives = 450/570 (78%), Gaps = 75/570 (13%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct: 1   MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
           RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct: 61  RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct: 121 LAKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFE                        
Sbjct: 181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFE------------------------ 216

Query: 241 EEFKRKCRSASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 300
                                  VQSL++  F G++ NLS +PDEAVAYGAAVQAAILSG
Sbjct: 217 -----------------------VQSLVRAVFHGRNFNLSTHPDEAVAYGAAVQAAILSG 253

Query: 301 DQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQV 360
           DQS  IQDVLLVDV PLSLGIETAGGVMTKLIERN RIPCKQT+TF+TY+DNQP V+IQV
Sbjct: 254 DQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQV 313

Query: 361 FEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNIT 420
           +EGERAMTKDNN LGTFDL+GIPPAPRGVP+I+VTFD+DANGILNV+AK+ S+GK++NIT
Sbjct: 314 YEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDMDANGILNVSAKEMSTGKAKNIT 373

Query: 421 IKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDA-GNKLT 479
           IKNDKGRLS+ EIDRM+N+AE+Y DEDEKQ++RI++RN LE+YVFNVKQ+++ A   KL 
Sbjct: 374 IKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQSVEQAPAGKLD 433

Query: 480 ESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH------------ 527
           E++K+   ++C+ T++WLD+NT A+KEE+  K+++L + C P+M+KMH            
Sbjct: 434 EADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQAAGAGAAGGP 493

Query: 528 --------GGAGGASAGDMPRGGPTVEEVD 549
                   GG GG S       GPTVEEVD
Sbjct: 494 GANCGQQAGGFGGYS-------GPTVEEVD 516

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|300253412|gb|ADJ96609.1| heat shock protein 70-p3 [Oxycera pardalina]

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/640 (64%), Positives = 471/640 (73%), Gaps = 92/640 (14%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPA+GIDLGTT+SCV VFQ GKVEIIANDQGNRTTPSYVAFT++ERLIGDAAKNQVAMNP
Sbjct: 1   MPAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNP 60

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
           +NTVFDAKRLIGRK+DDPKIQ+D+++WPFTV +D  KPKI VEFKGE+K FAPEEISSMV
Sbjct: 61  KNTVFDAKRLIGRKYDDPKIQEDLRNWPFTVKSDSGKPKICVEFKGEQKRFAPEEISSMV 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMKETAEAYLG +V DAVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAALAY
Sbjct: 121 LTKMKETAEAYLGETVNDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAY 180

Query: 181 GLDKNLKGERNVLI-------FD----------------------LGGGTFDVSILS--I 209
           GLDKNL GERNVLI       FD                      LGG  FD  ++S   
Sbjct: 181 GLDKNLSGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRLVSHLA 240

Query: 210 DE-------------GALFEVRSTAG----------------DTHLGGEDFDNRLVSHLA 240
           DE              AL  +R+ A                 D    G DF  ++     
Sbjct: 241 DEFKRKFKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGADFYTKVSRARF 300

Query: 241 EEF-------------KRKCRSASDVGDHHGDAHFV--------VQSLLQNFFCGKSLNL 279
           EE              K  C +  D    H D   V        VQSLLQNFF GKSLNL
Sbjct: 301 EELCADLFRSTLQPVEKALCDAKMDKAQIH-DIVLVGGSTRIPKVQSLLQNFFNGKSLNL 359

Query: 280 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP 339
           SINPDEAVAYGAAVQAAILSGD+SS IQDVLLVDV PLSLGIETAGGVMTK++ERN+RIP
Sbjct: 360 SINPDEAVAYGAAVQAAILSGDKSSKIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIP 419

Query: 340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD 399
           CKQ+QTFTTY+DNQPAVTIQVFEGERAMTKDNNLLGTF+LTGIPPAPRGVPKIDVTFDLD
Sbjct: 420 CKQSQTFTTYSDNQPAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIDVTFDLD 479

Query: 400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNN 459
           ANGILNV+AKDTS+G S+NITIKNDKGRLS+ EIDRM+ +AERY +EDEKQ++R++ARN 
Sbjct: 480 ANGILNVSAKDTSTGNSKNITIKNDKGRLSQSEIDRMLAEAERYAEEDEKQRQRVAARNQ 539

Query: 460 LEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSC 519
           LE YVFN+KQ+++DAG+KL+  +K    + C+ T+KWLDNN LA+KEE++ + Q+L + C
Sbjct: 540 LEGYVFNLKQSVEDAGSKLSPEDKDTVLKSCEDTIKWLDNNNLAEKEEFEHRFQELTRKC 599

Query: 520 MPLMSKMHGGAGGASAG----------DMPRGGPTVEEVD 549
            P+M+K+H G+G    G             R GPTVEEVD
Sbjct: 600 SPIMTKLHSGSGAGQQGPSCGQQAGGFGGARSGPTVEEVD 639

Source: Oxycera pardalina

Species: Oxycera pardalina

Genus: Oxycera

Family: Stratiomyidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312376960|gb|EFR23904.1| hypothetical protein AND_11878 [Anopheles darlingi]

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/631 (65%), Positives = 470/631 (74%), Gaps = 82/631 (12%)

Query: 1   MP-AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 59
           MP AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMN
Sbjct: 1   MPSAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMN 60

Query: 60  PRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSM 119
           P NTVFDAKRLIGRKFDDPKIQ DMKHWPFTVVND  KPKI+VEFKGERKTFAPEEISSM
Sbjct: 61  PTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDCGKPKIRVEFKGERKTFAPEEISSM 120

Query: 120 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALA 179
           VLTKMKETAEAYLG SV++AVITVPAYFND+QRQATKDAGAIAGLNVMRI+NEPTAAALA
Sbjct: 121 VLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALA 180

Query: 180 YGLDKNLKGERNVLIFD-----------------------------LGGGTFDVSI---- 206
           YGLDKNLKGERNVLIFD                             LGG  FD  I    
Sbjct: 181 YGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRIVAHF 240

Query: 207 --LSIDEGALFEVRSTAG----------------DTHLGGEDFDNRLVSHLAEE-----F 243
             LS +  AL  +R+                   D  + G D+  ++     EE     F
Sbjct: 241 KDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLF 300

Query: 244 KRKC----RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLSINPDEAVA 288
           +       ++ SD        H +V           QSLLQNFF GKSLNLSINPDEAVA
Sbjct: 301 RSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVA 360

Query: 289 YGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTT 348
           YGAAVQAAILSGD+   IQDVLLVDV PLSLGIETAGGVMTKLIERN+RIPCKQT+ F+T
Sbjct: 361 YGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFST 420

Query: 349 YADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTA 408
           YADNQP V+IQVFEGERAMTKDNNLLG FDL+GIPPAPRGVP+I+VTFDLDANGILNV A
Sbjct: 421 YADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAA 480

Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVK 468
           KD SSGK +NITIKNDKGRLS+ +IDRM+++AE++++EDEKQ+ERI+ARN LEAY FN+K
Sbjct: 481 KDKSSGKEKNITIKNDKGRLSQADIDRMVSEAEKFREEDEKQRERITARNQLEAYCFNLK 540

Query: 469 QALDDAG-NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH 527
           Q+L+  G +KL+++++    + CD TL+W+D NT+ADKEE+  K+Q+L + C P+M+K+H
Sbjct: 541 QSLEGEGSSKLSDADRKTVLDRCDETLRWIDGNTMADKEEFDHKMQELTRVCSPIMTKLH 600

Query: 528 -GGAGGAS--------AGDMPRGGPTVEEVD 549
              AGG S         G   R GPTVEEVD
Sbjct: 601 QQSAGGPSPSSCAQQAGGFGGRTGPTVEEVD 631

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328813889|gb|AEB52075.1| heat shock protein 70 [Microdera dzhungarica punctipennis]

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/643 (63%), Positives = 468/643 (72%), Gaps = 95/643 (14%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTDTERL+GDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVWQHGKVEIIANDQGNRTTPSYVAFTDTERLLGDAAKNQVAMNPA 64

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+FDAKRLIGRKFDDPKIQQD+KHWPF VVND  KPKIQVE+KGE K FAPEEISSMVL
Sbjct: 65  NTIFDAKRLIGRKFDDPKIQQDLKHWPFKVVNDCGKPKIQVEYKGEIKKFAPEEISSMVL 124

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKETAEAYLG +V+DA ITVPAYFND+QRQATKDAG IAGLNVMRI+NEPTAAALAYG
Sbjct: 125 TKMKETAEAYLGTTVKDAAITVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYG 184

Query: 182 LDKNLKGERNVLIFD-----------------------------LGGGTFDVSILS--ID 210
           LDKNLKGERNVLIFD                             LGG  FD  ++S   D
Sbjct: 185 LDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRLVSHLAD 244

Query: 211 E-------------GALFEVRSTAG----------------DTHLGGEDFDNRLVSHLAE 241
           E              AL  +R+ A                 D    G DF  +L     E
Sbjct: 245 EFKRKFKKDLRSNPRALRRLRTAAERAKRTLSSSTEASIEIDALFDGIDFYTKLSRARFE 304

Query: 242 EFKRKC---------RSASDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLSI 281
           E              ++ +D     G  H +V           QSLLQN+F GK+LNLSI
Sbjct: 305 ELNADLFRGTLQPVEKALADAKMDKGMIHDIVLVGGSTRIPKIQSLLQNYFNGKALNLSI 364

Query: 282 NPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCK 341
           NPDEAVAYGAAVQAA+LSG+  S IQDVLLVDVTPLSLGIETAGGVMTK+IERN RIPCK
Sbjct: 365 NPDEAVAYGAAVQAAVLSGETDSKIQDVLLVDVTPLSLGIETAGGVMTKIIERNARIPCK 424

Query: 342 QTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 401
           QTQTFTTY+DNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKI+VTFDLDAN
Sbjct: 425 QTQTFTTYSDNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIEVTFDLDAN 484

Query: 402 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461
           GILNV+AKDTSSG S+NITIKNDKGRLS+ +IDRM+++AE+YK+EDEKQ++RI+ARN LE
Sbjct: 485 GILNVSAKDTSSGNSRNITIKNDKGRLSQRDIDRMVSEAEQYKEEDEKQRQRIAARNQLE 544

Query: 462 AYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMP 521
            Y+F +KQA+ D G+KL+ ++K     ECD+ L+WLD+NTLA+KEEY+D+ +QL + C P
Sbjct: 545 GYIFQLKQAISDCGDKLSSADKETVTRECDSCLQWLDSNTLAEKEEYEDRQKQLTQICSP 604

Query: 522 LMSKMH---------------GGAGGASAGDMPRGGPTVEEVD 549
           +M+K++               G   G   G    GGPT+EEVD
Sbjct: 605 IMAKLYQSGGGSGMPGAGGSCGQQAGGFGGKKYGGGPTIEEVD 647

Source: Microdera dzhungarica punctipennis

Species: Microdera dzhungarica

Genus: Microdera

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	549
FB|FBgn0001230	635	Hsp68 "Heat shock protein 68"	0.448	0.387	0.882	1.5e-221
FB|FBgn0013275	642	Hsp70Aa "Heat-shock-protein-70	0.448	0.383	0.890	4.1e-221
FB|FBgn0013276	642	Hsp70Ab "Heat-shock-protein-70	0.448	0.383	0.890	4.1e-221
FB|FBgn0013277	641	Hsp70Ba "Heat-shock-protein-70	0.448	0.383	0.894	8.5e-221
FB|FBgn0013278	641	Hsp70Bb "Heat-shock-protein-70	0.448	0.383	0.894	8.5e-221
FB|FBgn0013279	641	Hsp70Bc "Heat-shock-protein-70	0.448	0.383	0.894	8.5e-221
UNIPROTKB|Q9GSU4	643	Hsp70Ba "Major heat shock 70 k	0.448	0.382	0.890	3.6e-220
FB|FBgn0051354	641	Hsp70Bbb "Hsp70Bbb" [Drosophil	0.448	0.383	0.890	4.7e-220
UNIPROTKB|Q9GSU7	644	Hsp70Ab "Major heat shock 70 k	0.448	0.381	0.882	7.6e-220
FB|FBgn0001217	633	Hsc70-2 "Heat shock protein co	0.453	0.393	0.839	5.8e-211

FB|FBgn0001230 Hsp68 "Heat shock protein 68" [Drosophila melanogaster (taxid:7227)]

 Score = 1140 (406.4 bits), Expect = 1.5e-221, Sum P(2) = 1.5e-221
 Identities = 217/246 (88%), Positives = 234/246 (95%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             +N+VFDAKRLIGR+FDD KIQ+D+KHWPF V+ND  KPKI VEFKG  K F+PEEISSMV
Sbjct:    61 KNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG +V+DAVITVPAYFND+QRQATKDAGAIAG+NV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+H A
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0009408 "response to heat" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006457 "protein folding" evidence=ISS

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0042594 "response to starvation" evidence=IMP

GO:0031427 "response to methotrexate" evidence=IEP

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0013275 Hsp70Aa "Heat-shock-protein-70Aa" [Drosophila melanogaster (taxid:7227)]

 Score = 1141 (406.7 bits), Expect = 4.1e-221, Sum P(2) = 4.1e-221
 Identities = 219/246 (89%), Positives = 233/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             +EFKRK
Sbjct:   241 DEFKRK 246

GO:0009408 "response to heat" evidence=IMP;NAS

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

FB|FBgn0013276 Hsp70Ab "Heat-shock-protein-70Ab" [Drosophila melanogaster (taxid:7227)]

 Score = 1141 (406.7 bits), Expect = 4.1e-221, Sum P(2) = 4.1e-221
 Identities = 219/246 (89%), Positives = 233/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             +EFKRK
Sbjct:   241 DEFKRK 246

GO:0009408 "response to heat" evidence=ISS;IMP;NAS

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

FB|FBgn0013277 Hsp70Ba "Heat-shock-protein-70Ba" [Drosophila melanogaster (taxid:7227)]

 Score = 1144 (407.8 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
 Identities = 220/246 (89%), Positives = 233/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0009408 "response to heat" evidence=IMP;NAS

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

FB|FBgn0013278 Hsp70Bb "Heat-shock-protein-70Bb" [Drosophila melanogaster (taxid:7227)]

 Score = 1144 (407.8 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
 Identities = 220/246 (89%), Positives = 233/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0009408 "response to heat" evidence=IMP;NAS

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

FB|FBgn0013279 Hsp70Bc "Heat-shock-protein-70Bc" [Drosophila melanogaster (taxid:7227)]

 Score = 1144 (407.8 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
 Identities = 220/246 (89%), Positives = 233/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0009408 "response to heat" evidence=IMP;NAS

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

GO:0031427 "response to methotrexate" evidence=IEP

UNIPROTKB|Q9GSU4 Hsp70Ba "Major heat shock 70 kDa protein Ba" [Drosophila simulans (taxid:7240)]

 Score = 1138 (405.7 bits), Expect = 3.6e-220, Sum P(2) = 3.6e-220
 Identities = 219/246 (89%), Positives = 232/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDCGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             L KMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LAKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0051354 Hsp70Bbb "Hsp70Bbb" [Drosophila melanogaster (taxid:7227)]

 Score = 1137 (405.3 bits), Expect = 4.7e-220, Sum P(2) = 4.7e-220
 Identities = 219/246 (89%), Positives = 232/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q GKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +DMKHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLK ERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKDERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0009408 "response to heat" evidence=ISS;IMP

GO:0035080 "heat shock-mediated polytene chromosome puffing" evidence=IMP

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IEP;IMP

UNIPROTKB|Q9GSU7 Hsp70Ab "Major heat shock 70 kDa protein Ab" [Drosophila simulans (taxid:7240)]

 Score = 1131 (403.2 bits), Expect = 7.6e-220, Sum P(2) = 7.6e-220
 Identities = 217/246 (88%), Positives = 232/246 (94%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             MPAIGIDLGTTYSCV V+Q G+VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP
Sbjct:     1 MPAIGIDLGTTYSCVGVYQHGEVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNP 60

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             RNTVFDAKRLIGRK+DDPKI +D+KHWPF VV+D  KPKI VE+KGE K FAPEEISSMV
Sbjct:    61 RNTVFDAKRLIGRKYDDPKIAEDIKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMV 120

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             L KMKETAEAYLG S+ DAVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAALAY
Sbjct:   121 LVKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAY 180

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVSIL+IDEG+LFEVRSTAGDTHLGGEDFDNRLV+HLA
Sbjct:   181 GLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLA 240

Query:   241 EEFKRK 246
             EEFKRK
Sbjct:   241 EEFKRK 246

GO:0005575 "cellular_component" evidence=ND

GO:0009408 "response to heat" evidence=ISS

FB|FBgn0001217 Hsc70-2 "Heat shock protein cognate 2" [Drosophila melanogaster (taxid:7227)]

 Score = 1102 (393.0 bits), Expect = 5.8e-211, Sum P(2) = 5.8e-211
 Identities = 209/249 (83%), Positives = 232/249 (93%)

Query:     1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
             +PAIGIDLGTTYSCV V+Q  KVEIIANDQGNRTTPSYVAF +TERLIGD AKNQVAMN 
Sbjct:     4 IPAIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNA 63

Query:    61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             +NTVFDAKRLIGRKFDD KIQ+D+K WPF V+N++ KPKI+VEFKGERK FAPEEISSMV
Sbjct:    64 KNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMV 123

Query:   121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
             LTKM+E AE YLG  V+DAV+TVPAYFND+QRQATKDAG+IAGLNV+RI+NEPTAAALAY
Sbjct:   124 LTKMREIAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAY 183

Query:   181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
             GLDKNLKGERNVLIFDLGGGTFDVS+LSIDEG+LFEV++TAGDTHLGGEDFDNRLV+H A
Sbjct:   184 GLDKNLKGERNVLIFDLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFA 243

Query:   241 EEFKRKCRS 249
             EEFKRK +S
Sbjct:   244 EEFKRKHKS 252

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=NAS

GO:0005739 "mitochondrion" evidence=ISS

GO:0051082 "unfolded protein binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q91883	GRP78_XENLA	No assigned EC number	0.5040	0.9599	0.8009	N/A	N/A
Q54BE0	HS7C3_DICDI	No assigned EC number	0.5495	0.9617	0.8380	yes	N/A
P16474	GRP78_YEAST	No assigned EC number	0.5073	0.9635	0.7756	yes	N/A
Q6S4N2	HS71B_PIG	No assigned EC number	0.8333	0.4462	0.3822	yes	N/A
Q75C78	GRP78_ASHGO	No assigned EC number	0.4950	0.9489	0.7729	yes	N/A
Q24789	HSP70_ECHGR	No assigned EC number	0.5537	0.9963	0.8225	N/A	N/A
P07823	GRP78_MESAU	No assigned EC number	0.5105	0.9690	0.8134	N/A	N/A
P82910	HSP70_DROME	No assigned EC number	0.8830	0.4025	0.3442	yes	N/A
P41827	HSP74_ANOAL	No assigned EC number	0.9190	0.4480	0.3843	N/A	N/A
P17804	HSP70_LEIDO	No assigned EC number	0.5573	0.9526	0.8009	N/A	N/A
Q10284	HSP75_SCHPO	No assigned EC number	0.4623	0.9089	0.8140	yes	N/A
P18694	HSP72_USTMA	No assigned EC number	0.5403	0.9544	0.8124	N/A	N/A
Q9BIS2	HSP73_DROME	No assigned EC number	0.8870	0.4043	0.3463	yes	N/A
Q27975	HS71A_BOVIN	No assigned EC number	0.8333	0.4462	0.3822	yes	N/A
P22954	MD37D_ARATH	No assigned EC number	0.5276	0.9908	0.8330	yes	N/A
Q8INI8	HSP72_DROME	No assigned EC number	0.8870	0.4043	0.3463	yes	N/A
Q6FW50	GRP78_CANGA	No assigned EC number	0.5065	0.9617	0.7916	yes	N/A
Q9VG58	HSP74_DROME	No assigned EC number	0.8830	0.4043	0.3463	yes	N/A
P06761	GRP78_RAT	No assigned EC number	0.5088	0.9690	0.8134	yes	N/A
Q9C7X7	HSP7N_ARATH	No assigned EC number	0.5377	0.9617	0.8557	no	N/A
P02825	HSP71_DROME	No assigned EC number	0.8830	0.4025	0.3442	yes	N/A
P09189	HSP7C_PETHY	No assigned EC number	0.5481	0.9981	0.8417	N/A	N/A
P41826	HSP72_ANOAL	No assigned EC number	0.9076	0.4517	0.3875	N/A	N/A
P41825	HSP71_ANOAL	No assigned EC number	0.9076	0.4517	0.3875	N/A	N/A
P20029	GRP78_MOUSE	No assigned EC number	0.5088	0.9690	0.8122	yes	N/A
P11143	HSP70_MAIZE	No assigned EC number	0.5328	0.9963	0.8480	N/A	N/A
Q27965	HS71B_BOVIN	No assigned EC number	0.8333	0.4462	0.3822	yes	N/A
Q07437	HSP70_LEIAM	No assigned EC number	0.5382	0.9836	0.8282	N/A	N/A
Q9BIR7	HSP75_DROME	No assigned EC number	0.8870	0.4043	0.3463	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	549
pfam00012	598	pfam00012, HSP70, Hsp70 protein	0.0
TIGR02350	595	TIGR02350, prok_dnaK, chaperone protein DnaK	0.0
cd10233	376	cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding	0.0
cd10241	374	cd10241, HSPA5-like_NBD, Nucleotide-binding domain	1e-161
PTZ00009	653	PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro	1e-159
PTZ00009	653	PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro	1e-149
PRK00290	627	PRK00290, dnaK, molecular chaperone DnaK; Provisio	1e-132
PRK00290	627	PRK00290, dnaK, molecular chaperone DnaK; Provisio	1e-126
cd10234	376	cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d	1e-124
TIGR01991	599	TIGR01991, HscA, Fe-S protein assembly chaperone H	1e-123
cd10170	369	cd10170, HSP70_NBD, Nucleotide-binding domain of t	1e-119
cd11733	377	cd11733, HSPA9-like_NBD, Nucleotide-binding domain	1e-118
cd11734	373	cd11734, Ssq1_like_NBD, Nucleotide-binding domain	1e-107
COG0443	579	COG0443, DnaK, Molecular chaperone [Posttranslatio	1e-103
PRK13410	668	PRK13410, PRK13410, molecular chaperone DnaK; Prov	6e-97
cd10228	381	cd10228, HSPA4_like_NDB, Nucleotide-binding domain	9e-97
PTZ00400	663	PTZ00400, PTZ00400, DnaK-type molecular chaperone;	1e-95
CHL00094	621	CHL00094, dnaK, heat shock protein 70	2e-95
PRK13411	653	PRK13411, PRK13411, molecular chaperone DnaK; Prov	1e-94
PTZ00400	663	PTZ00400, PTZ00400, DnaK-type molecular chaperone;	5e-89
COG0443	579	COG0443, DnaK, Molecular chaperone [Posttranslatio	2e-88
cd10236	355	cd10236, HscA_like_NBD, Nucleotide-binding domain	3e-87
cd10235	339	cd10235, HscC_like_NBD, Nucleotide-binding domain	3e-86
CHL00094	621	CHL00094, dnaK, heat shock protein 70	3e-85
PLN03184	673	PLN03184, PLN03184, chloroplast Hsp70; Provisional	4e-85
PRK13411	653	PRK13411, PRK13411, molecular chaperone DnaK; Prov	1e-84
PTZ00186	657	PTZ00186, PTZ00186, heat shock 70 kDa precursor pr	5e-84
PRK05183	616	PRK05183, hscA, chaperone protein HscA; Provisiona	8e-81
cd10238	375	cd10238, HSPA14-like_NBD, Nucleotide-binding domai	6e-76
cd10237	417	cd10237, HSPA13-like_NBD, Nucleotide-binding domai	8e-76
PLN03184	673	PLN03184, PLN03184, chloroplast Hsp70; Provisional	5e-75
PRK13410	668	PRK13410, PRK13410, molecular chaperone DnaK; Prov	3e-74
PTZ00186	657	PTZ00186, PTZ00186, heat shock 70 kDa precursor pr	1e-65
cd11739	383	cd11739, HSPH1_NBD, Nucleotide-binding domain of H	5e-60
cd10230	388	cd10230, HYOU1-like_NBD, Nucleotide-binding domain	1e-59
PRK05183	616	PRK05183, hscA, chaperone protein HscA; Provisiona	9e-59
cd10232	386	cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma	1e-56
cd11737	383	cd11737, HSPA4_NBD, Nucleotide-binding domain of H	5e-56
cd11732	377	cd11732, HSP105-110_like_NBD, Nucleotide-binding d	2e-54
cd11738	383	cd11738, HSPA4L_NBD, Nucleotide-binding domain of	4e-52
PRK01433	595	PRK01433, hscA, chaperone protein HscA; Provisiona	3e-46
PRK01433	595	PRK01433, hscA, chaperone protein HscA; Provisiona	1e-44
cd10231	415	cd10231, YegD_like, Escherichia coli YegD, a putat	1e-22
cd10233	376	cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding	2e-14
cd10229	404	cd10229, HSPA12_like_NBD, Nucleotide-binding domai	4e-14
cd10225	320	cd10225, MreB_like, MreB and similar proteins	1e-12
cd10241	374	cd10241, HSPA5-like_NBD, Nucleotide-binding domain	4e-09
cd00012	185	cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-	2e-08
pfam06723	327	pfam06723, MreB_Mbl, MreB/Mbl protein	4e-08
TIGR00904	333	TIGR00904, mreB, cell shape determining protein, M	1e-07
PRK15080	267	PRK15080, PRK15080, ethanolamine utilization prote	1e-07
cd10234	376	cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d	3e-07
PRK11678	450	PRK11678, PRK11678, putative chaperone; Provisiona	5e-07
COG4820	277	COG4820, EutJ, Ethanolamine utilization protein, p	5e-07
PRK13930	335	PRK13930, PRK13930, rod shape-determining protein	2e-06
TIGR02529	239	TIGR02529, EutJ, ethanolamine utilization protein	4e-06
PRK13929	335	PRK13929, PRK13929, rod-share determining protein	5e-06
PRK13928	336	PRK13928, PRK13928, rod shape-determining protein	6e-06
cd11734	373	cd11734, Ssq1_like_NBD, Nucleotide-binding domain	1e-05
cd10170	369	cd10170, HSP70_NBD, Nucleotide-binding domain of t	3e-05
cd10228	381	cd10228, HSPA4_like_NDB, Nucleotide-binding domain	8e-05
cd10235	339	cd10235, HscC_like_NBD, Nucleotide-binding domain	1e-04
COG1077	342	COG1077, MreB, Actin-like ATPase involved in cell	1e-04
cd10237	417	cd10237, HSPA13-like_NBD, Nucleotide-binding domai	2e-04
cd10238	375	cd10238, HSPA14-like_NBD, Nucleotide-binding domai	5e-04
COG0849	418	COG0849, ftsA, Cell division ATPase FtsA [Cell div	0.001

>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein

 Score =  708 bits (1829), Expect = 0.0
 Identities = 302/608 (49%), Positives = 376/608 (61%), Gaps = 94/608 (15%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
            IGIDLGTT SCVAV + G  E+IAND+GNRTTPS VAFT  ERL+G AAK Q   NP+N
Sbjct: 1   VIGIDLGTTNSCVAVMEGGGPEVIANDEGNRTTPSVVAFTPKERLVGQAAKRQAVTNPKN 60

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRS-KPKIQVEFKGERKTFAPEEISSMVL 121
           TVF  KRLIGRKF DP +Q+D+KH P+ VV   +    ++V + GE  TF PE+IS+MVL
Sbjct: 61  TVFSVKRLIGRKFSDPVVQRDIKHVPYKVVKLPNGDAGVEVRYLGE--TFTPEQISAMVL 118

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+KETAEAYLG  V DAVITVPAYFNDAQRQATKDAG IAGLNV+RI+NEPTAAALAYG
Sbjct: 119 QKLKETAEAYLGEPVTDAVITVPAYFNDAQRQATKDAGRIAGLNVLRIINEPTAAALAYG 178

Query: 182 LDKNLKGERNVLIFD----------------------------LGGGTFDVSIL------ 207
           LDK    ERNVL+FD                            LGG  FD  ++      
Sbjct: 179 LDKK-DKERNVLVFDLGGGTFDVSILEIGDGVFEVLATNGDTHLGGEDFDNRLVDHFVEE 237

Query: 208 -----SID---------------EGALFEVRSTAGDTHL-------GGEDFD-------- 232
                 ID               E A  E+ S   + +L        G+D          
Sbjct: 238 FKKKYGIDLSKDPRALQRLREAAEKAKIELSSNQTEINLPFITAMADGKDVSGTLTRAKF 297

Query: 233 NRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKSLNLS 280
             L + L E        A  D      +   V           VQ L++ FF GK  +  
Sbjct: 298 EELCADLFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPAVQELVKEFF-GKEPSKG 356

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           +NPDEAVA GAAVQA +LSG     ++DVLL+DVTPLSLGIET GGVMTKLI RNT IP 
Sbjct: 357 VNPDEAVAIGAAVQAGVLSGTF--DVKDVLLLDVTPLSLGIETLGGVMTKLIPRNTTIPT 414

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           K++Q F+T ADNQ AV IQV++GER M  DN LLG+F+L GIPPAPRGVP+I+VTFD+DA
Sbjct: 415 KKSQIFSTAADNQTAVEIQVYQGEREMAPDNKLLGSFELDGIPPAPRGVPQIEVTFDIDA 474

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           NGIL V+AKD  +GK Q ITI    G LS +EI+RM+ DAE Y  ED+K+KERI A+N  
Sbjct: 475 NGILTVSAKDKGTGKEQKITITASSG-LSDDEIERMVKDAEEYAAEDKKRKERIEAKNEA 533

Query: 461 EAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTL-ADKEEYQDKLQQLQKSC 519
           E YV++++++L + G+KL E++K    ++ +  ++WL       DKEE + K ++LQK  
Sbjct: 534 EEYVYSLEKSLKEEGDKLPEADK----KKVEEAIEWLKEELEGEDKEEIEAKTEELQKVV 589

Query: 520 MPLMSKMH 527
            P+  +M+
Sbjct: 590 QPIGERMY 597

Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region. Length = 598

>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK

 Score =  588 bits (1518), Expect = 0.0
 Identities = 280/609 (45%), Positives = 356/609 (58%), Gaps = 102/609 (16%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPR 61
            IGIDLGTT SCVAV + G+  +I N +G RTTPS VAFT   ERL+G  AK Q   NP 
Sbjct: 2   IIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPE 61

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT++  KR +GR+FD  ++ ++ K  P+ VV D       V  K + K + P+EIS+M+L
Sbjct: 62  NTIYSIKRFMGRRFD--EVTEEAKRVPYKVVGDGG----DVRVKVDGKEYTPQEISAMIL 115

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+K+ AEAYLG  V +AVITVPAYFNDAQRQATKDAG IAGL V+RI+NEPTAAALAYG
Sbjct: 116 QKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYG 175

Query: 182 LDKNLKGERNVLIFD----------------------------LGGGTFDVSI------- 206
           LDK+ K +  +L+FD                            LGG  FD  I       
Sbjct: 176 LDKS-KKDEKILVFDLGGGTFDVSILEIGDGVFEVLSTAGDTHLGGDDFDQRIIDWLADE 234

Query: 207 --------LSIDEGALFEVRSTA-------------------------GDTHLGGE---- 229
                   LS D+ AL  ++  A                         G  HL       
Sbjct: 235 FKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRA 294

Query: 230 DFDNRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKSL 277
            F+  L + L E  K   R A  D G    D   V           VQ L+++FF GK  
Sbjct: 295 KFE-ELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFF-GKEP 352

Query: 278 NLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTR 337
           N S+NPDE VA GAA+Q  +L GD    ++DVLL+DVTPLSLGIET GGVMTKLIERNT 
Sbjct: 353 NKSVNPDEVVAIGAAIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKLIERNTT 408

Query: 338 IPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD 397
           IP K++Q F+T ADNQPAV I V +GER M  DN  LG F+LTGIPPAPRGVP+I+VTFD
Sbjct: 409 IPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFD 468

Query: 398 LDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISAR 457
           +DANGIL+V+AKD  +GK Q+ITI    G LS+EEI+RM+ +AE   +ED+K+KE I AR
Sbjct: 469 IDANGILHVSAKDKGTGKEQSITITASSG-LSEEEIERMVKEAEANAEEDKKRKEEIEAR 527

Query: 458 NNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           NN ++  +  ++ L +AG+KL   EK +  +      + L      D EE + K ++LQ+
Sbjct: 528 NNADSLAYQAEKTLKEAGDKLPAEEKEKIEKAVAELKEALKGE---DVEEIKAKTEELQQ 584

Query: 518 SCMPLMSKM 526
           +   L   M
Sbjct: 585 ALQKLAEAM 593

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved [Protein fate, Protein folding and stabilization]. Length = 595

>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins

 Score =  526 bits (1357), Expect = 0.0
 Identities = 203/244 (83%), Positives = 220/244 (90%), Gaps = 1/244 (0%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP N
Sbjct: 1   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 60

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF VVN   KP I VE+KGE KTF PEEISSMVLT
Sbjct: 61  TVFDAKRLIGRKFSDPVVQSDMKHWPFKVVNGGGKPPIIVEYKGETKTFYPEEISSMVLT 120

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG +V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 121 KMKEIAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 180

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK   GERNVLIFDLGGGTFDVS+L+I++G +FEV++TAGDTHLGGEDFDNRLV+H  +E
Sbjct: 181 DKKGGGERNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVNHFVQE 239

Query: 243 FKRK 246
           FKRK
Sbjct: 240 FKRK 243

This subfamily includes human HSPA1A (70-kDa heat shock protein 1A, also known as HSP72; HSPA1; HSP70I; HSPA1B; HSP70-1; HSP70-1A), HSPA1B (70-kDa heat shock protein 1B, also known as HSPA1A; HSP70-2; HSP70-1B), and HSPA1L (70-kDa heat shock protein 1-like, also known as HSP70T; hum70t; HSP70-1L; HSP70-HOM). The genes for these three HSPA1 proteins map in close proximity on the major histocompatibility complex (MHC) class III region on chromosome 6, 6p21.3. This subfamily also includes human HSPA8 (heat shock 70kDa protein 8, also known as LAP1; HSC54; HSC70; HSC71; HSP71; HSP73; NIP71; HSPA10; the HSPA8 gene maps to 11q24.1), human HSPA2 (70-kDa heat shock protein 2, also known as HSP70-2; HSP70-3, the HSPA2 gene maps to 14q24.1), human HSPA6 (also known as heat shock 70kDa protein 6 (HSP70B') gi 94717614, the HSPA6 gene maps to 1q23.3), human HSPA7 (heat shock 70kDa protein 7 , also known as HSP70B; the HSPA7 gene maps to 1q23.3) and Saccharmoyces cerevisiae Stress-Seventy subfamily B/Ssb1p. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Associations of polymorphisms within the MHC-III HSP70 gene locus with longevity, systemic lupus erythematosus, Meniere's disease, noise-induced hearing loss, high-altitude pulmonary edema, and coronary heart disease, have been found. HSPA2 is involved in cancer cell survival, is required for maturation of male gametophytes, and is linked to male infertility. The induction of HSPA6 is a biomarker of cellular stress. HSPA8 participates in the folding and trafficking of client proteins to different subcellular compartments, and in the signal transduction and apoptosis process; it has been shown to protect cardiomyocytes against oxidative stress partly through an interaction with alpha-enolase. S. cerevisiae Ssb1p, is part of the ribosome-associated complex (RAC), it acts as a chaperone for nascent polypeptides, and is important for translation fidelity; Ssb1p is also a [PSI+] prion-curing factor. Length = 376

>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins

 Score =  463 bits (1193), Expect = e-161
 Identities = 179/245 (73%), Positives = 208/245 (84%), Gaps = 2/245 (0%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
             IGIDLGTTYSCV VF+ G+VEIIANDQGNR TPSYVAFTD ERLIGDAAKNQ   NP 
Sbjct: 2   TVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTDGERLIGDAAKNQATSNPE 61

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+FD KRLIGRKFDD ++Q+D+K  P+ VVN   KP I+V+ KGE+KTF+PEEIS+MVL
Sbjct: 62  NTIFDVKRLIGRKFDDKEVQKDIKLLPYKVVNKDGKPYIEVDVKGEKKTFSPEEISAMVL 121

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG  V+ AV+TVPAYFNDAQRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGKKVKHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYG 181

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK   GE+N+L+FDLGGGTFDVS+L+ID G +FEV +T GDTHLGGEDFD R++ H  +
Sbjct: 182 LDKK-GGEKNILVFDLGGGTFDVSLLTIDNG-VFEVLATNGDTHLGGEDFDQRVMEHFIK 239

Query: 242 EFKRK 246
            FK+K
Sbjct: 240 LFKKK 244

This subfamily includes human HSPA5 (also known as 70-kDa heat shock protein 5, glucose-regulated protein 78/GRP78, and immunoglobulin heavy chain-binding protein/BIP, MIF2; the gene encoding HSPA5 maps to 9q33.3.), Sacchaormyces cerevisiae Kar2p (also known as Grp78p), and related proteins. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. HSPA5 and Kar2p are chaperones of the endoplasmic reticulum (ER). Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Multiple ER DNAJ domain proteins have been identified and may exist in distinct complexes with HSPA5 in various locations in the ER, for example DNAJC3-p58IPK in the lumen. HSPA5-NEFs include SIL1 and an atypical HSP70 family protein HYOU1/ORP150. The ATPase activity of Kar2p is stimulated by the NEFs: Sil1p and Lhs1p. Length = 374

>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional

 Score =  468 bits (1207), Expect = e-159
 Identities = 192/248 (77%), Positives = 215/248 (86%), Gaps = 2/248 (0%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV V++   VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA NP 
Sbjct: 5   PAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPE 64

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMV 120
           NTVFDAKRLIGRKFDD  +Q DMKHWPF V      KP I+V ++GE+KTF PEEISSMV
Sbjct: 65  NTVFDAKRLIGRKFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMV 124

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKE AEAYLG  V+DAV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AY
Sbjct: 125 LQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 184

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDK   GE+NVLIFDLGGGTFDVS+L+I++G +FEV++TAGDTHLGGEDFDNRLV    
Sbjct: 185 GLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCV 243

Query: 241 EEFKRKCR 248
           ++FKRK R
Sbjct: 244 QDFKRKNR 251

Length = 653

>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional

 Score =  443 bits (1140), Expect = e-149
 Identities = 189/306 (61%), Positives = 233/306 (76%), Gaps = 20/306 (6%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           VQSL+++FF GK    SINPDEAVAYGAAVQAAIL+G+QSS +QD+LL+DVTPLSLG+ET
Sbjct: 348 VQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLET 407

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
           AGGVMTKLIERNT IP K++Q FTTYADNQP V IQVFEGERAMTKDNNLLG F L GIP
Sbjct: 408 AGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIP 467

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGILNV+A+D S+GKS  ITI NDKGRLSK +IDRM+N+AE+Y
Sbjct: 468 PAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKY 527

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNT 501
           K EDE  +ER+ A+N LE Y +++K  L D     KL++S+K+   +  D  L+WL+ N 
Sbjct: 528 KAEDEANRERVEAKNGLENYCYSMKNTLQDEKVKGKLSDSDKATIEKAIDEALEWLEKNQ 587

Query: 502 LADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRG------------------GP 543
           LA+KEE++ K ++++  C P+M+KM+  AGG   G MP G                  GP
Sbjct: 588 LAEKEEFEHKQKEVESVCNPIMTKMYQAAGGGMPGGMPGGMPGGMPGGAGPAGAGASSGP 647

Query: 544 TVEEVD 549
           TVEEVD
Sbjct: 648 TVEEVD 653

Length = 653

>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional

 Score =  397 bits (1023), Expect = e-132
 Identities = 147/245 (60%), Positives = 184/245 (75%), Gaps = 9/245 (3%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPR 61
            IGIDLGTT SCVAV + G+ ++I N +G RTTPS VAFT   ERL+G  AK Q   NP 
Sbjct: 4   IIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPE 63

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+F  KRL+GR+  D ++Q+D+K  P+ +V         VE  G  K + P+EIS+M+L
Sbjct: 64  NTIFSIKRLMGRR--DEEVQKDIKLVPYKIVKA-DNGDAWVEIDG--KKYTPQEISAMIL 118

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+K+ AE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V+RI+NEPTAAALAYG
Sbjct: 119 QKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYG 178

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK  KG+  +L++DLGGGTFDVSIL I +G +FEV ST GDTHLGG+DFD R++ +LA+
Sbjct: 179 LDK--KGDEKILVYDLGGGTFDVSILEIGDG-VFEVLSTNGDTHLGGDDFDQRIIDYLAD 235

Query: 242 EFKRK 246
           EFK++
Sbjct: 236 EFKKE 240

Length = 627

>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional

 Score =  381 bits (982), Expect = e-126
 Identities = 151/335 (45%), Positives = 197/335 (58%), Gaps = 27/335 (8%)

Query: 233 NRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKSLNLS 280
             L   L E     C+ A  D G    D   V           VQ L++ FF GK  N  
Sbjct: 299 EELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEPNKG 357

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           +NPDE VA GAA+Q  +L+GD    ++DVLL+DVTPLSLGIET GGVMTKLIERNT IP 
Sbjct: 358 VNPDEVVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPT 413

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
           K++Q F+T ADNQPAVTI V +GER M  DN  LG F+LTGIPPAPRGVP+I+VTFD+DA
Sbjct: 414 KKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDA 473

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           NGI++V+AKD  +GK Q+ITI    G LS EEI+RM+ DAE   +ED+K+KE + ARN  
Sbjct: 474 NGIVHVSAKDKGTGKEQSITITASSG-LSDEEIERMVKDAEANAEEDKKRKELVEARNQA 532

Query: 461 EAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCM 520
           ++ ++  ++ L + G+K+   EK +         + L      DKE  + K ++L ++  
Sbjct: 533 DSLIYQTEKTLKELGDKVPADEKEKIEAAIKELKEALKGE---DKEAIKAKTEELTQASQ 589

Query: 521 PLMSKMHGGAGGASAGDMPRGG------PTVEEVD 549
            L   M+  A  A                  EEV 
Sbjct: 590 KLGEAMYQQAQAAQGAAGAAAKDDDVVDAEFEEVK 624

Length = 627

>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins

 Score =  368 bits (946), Expect = e-124
 Identities = 142/245 (57%), Positives = 177/245 (72%), Gaps = 8/245 (3%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPR 61
            IGIDLGTT SCVAV + G+  +I N +G+RTTPS VAFT   ERL+G  AK Q   NP 
Sbjct: 4   IIGIDLGTTNSCVAVMEGGEPTVIPNAEGSRTTPSVVAFTKKGERLVGQPAKRQAVTNPE 63

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+F  KR +GRKFD+ + ++ + +          K +I        K + P+EIS+M+L
Sbjct: 64  NTIFSIKRFMGRKFDEVEEERKVPYKVVVDEGGNYKVEIDSN----GKDYTPQEISAMIL 119

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+KE AEAYLG  V +AVITVPAYFND+QRQATKDAG IAGL V+RI+NEPTAAALAYG
Sbjct: 120 QKLKEDAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYG 179

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK  KG   +L++DLGGGTFDVSIL I +G +FEV +T GDTHLGG+DFD R++  L E
Sbjct: 180 LDK--KGNEKILVYDLGGGTFDVSILEIGDG-VFEVLATNGDTHLGGDDFDQRIIDWLVE 236

Query: 242 EFKRK 246
           EFK++
Sbjct: 237 EFKKE 241

This subfamily includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, Saccharomyces cerevisiae Stress-seventy subfamily Q protein 1/Ssq1p (also called Ssc2p, Ssh1p, mtHSP70 homolog), and S. cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. Length = 376

>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA

 Score =  373 bits (961), Expect = e-123
 Identities = 203/559 (36%), Positives = 290/559 (51%), Gaps = 94/559 (16%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPR 61
           A+GIDLGTT S VA  + G  E++ + +G    PS V +  D    +G  A    A +P+
Sbjct: 1   AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPK 60

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+   KRL+GR  +D K        P+  V+    P   V  +  + T  P E+S+ +L
Sbjct: 61  NTISSVKRLMGRSIEDIKTF---SILPYRFVDG---PGEMVRLRTVQGTVTPVEVSAEIL 114

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+K+ AE  LG  +  AVITVPAYF+DAQRQATKDA  +AGLNV+R++NEPTAAA+AYG
Sbjct: 115 KKLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYG 174

Query: 182 LDKNLKGERNVLIFDL----------------------------GGGTFDVSI------- 206
           LDK    E    ++DL                            GG  FD ++       
Sbjct: 175 LDKA--SEGIYAVYDLGGGTFDVSILKLTKGVFEVLATGGDSALGGDDFDHALAKWILKQ 232

Query: 207 ----LSIDEG--------------ALFEVRSTAGDTHLGGEDFD--------NRLVSHLA 240
                 ++                AL +  S   D  L G+DF           L+  L 
Sbjct: 233 LGISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTLDGKDFKGKLTRDEFEALIQPLV 292

Query: 241 EEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVA 288
           ++    CR A  D G    +   V           V+  +   F G+     I+PD+ VA
Sbjct: 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGSTRMPLVRRAVAELF-GQEPLTDIDPDQVVA 351

Query: 289 YGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTT 348
            GAA+QA +L+G++     D+LL+DVTPLSLGIET GG++ K+I RNT IP  + Q FTT
Sbjct: 352 LGAAIQADLLAGNRIG--NDLLLLDVTPLSLGIETMGGLVEKIIPRNTPIPVARAQEFTT 409

Query: 349 YADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTA 408
           Y D Q A+ I V +GER + +D   L  F+L GIPP   G  +I VTF +DA+G+L V+A
Sbjct: 410 YKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLTVSA 469

Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDED----EKQKERISARNNLEAYV 464
           ++ S+G  Q+I +K   G LS EEI+RM+ D+ ++ +ED       ++++ A   LEA  
Sbjct: 470 QEQSTGVEQSIQVKPSYG-LSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEA-- 526

Query: 465 FNVKQALDDAGNKLTESEK 483
             ++ AL   G+ L+E E+
Sbjct: 527 --LQAALAADGDLLSEDER 543

The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK [Protein fate, Protein folding and stabilization]. Length = 599

>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family

 Score =  355 bits (913), Expect = e-119
 Identities = 146/245 (59%), Positives = 177/245 (72%), Gaps = 7/245 (2%)

Query: 4   IGIDLGTTYSCVAVFQ-QGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPR 61
           IGIDLGTT S VA     GK EII N +G+RTTPS V F    E L+G+AAK Q   NP 
Sbjct: 1   IGIDLGTTNSAVAYVDNGGKPEIIPNGEGSRTTPSVVYFDGDGEVLVGEAAKRQALDNPE 60

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTV D KRLIGRKFDDP +Q   K     +  DR  P I V  +   K ++PEE+S+++L
Sbjct: 61  NTVGDFKRLIGRKFDDPLVQSAKKV----IGVDRGAPIIPVPVELGGKKYSPEEVSALIL 116

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
            K+KE AEAYLG  V +AVITVPAYFNDAQR+ATK+A  IAGLNV+R++NEPTAAALAYG
Sbjct: 117 KKLKEDAEAYLGEPVTEAVITVPAYFNDAQREATKEAAEIAGLNVVRLINEPTAAALAYG 176

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK  +  R +L+FDLGGGTFDVS++ ++ G  FEV +T GD HLGG+DFDN L  +LAE
Sbjct: 177 LDKKDEKGRTILVFDLGGGTFDVSLVEVEGGV-FEVLATGGDNHLGGDDFDNALADYLAE 235

Query: 242 EFKRK 246
           +FK K
Sbjct: 236 KFKEK 240

HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs. Length = 369

>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins

 Score =  352 bits (906), Expect = e-118
 Identities = 150/246 (60%), Positives = 188/246 (76%), Gaps = 7/246 (2%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNP 60
             IGIDLGTT SCVAV +    ++I N +G RTTPS VAFT D ERL+G  AK Q   NP
Sbjct: 3   AVIGIDLGTTNSCVAVMEGKTPKVIENAEGARTTPSVVAFTKDGERLVGMPAKRQAVTNP 62

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NT++  KRLIGR+FDDP++Q+D+K+ P+ +V   S     VE  G  K ++P +I + V
Sbjct: 63  ENTLYATKRLIGRRFDDPEVQKDIKNVPYKIVK-ASNGDAWVEAHG--KKYSPSQIGAFV 119

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKETAEAYLG  V++AVITVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAALAY
Sbjct: 120 LMKMKETAEAYLGKPVKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAY 179

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDK  K ++ + ++DLGGGTFD+SIL I +G +FEV+ST GDT LGGEDFDN L+ HL 
Sbjct: 180 GLDK--KDDKVIAVYDLGGGTFDISILEIQKG-VFEVKSTNGDTFLGGEDFDNALLRHLV 236

Query: 241 EEFKRK 246
           +EFK++
Sbjct: 237 KEFKKE 242

This subgroup includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, and Saccharomyces cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. HSPA9 is involved in multiple processses including mitochondrial import, antigen processing, control of cellular proliferation and differentiation, and regulation of glucose responses. During glucose deprivation-induced cellular stress, HSPA9 plays an important role in the suppression of apoptosis by inhibiting a conformational change in Bax that allow the release of cytochrome c. DnaK modulates the heat shock response in Escherichia coli. It protects E. coli from protein carbonylation, an irreversible oxidative modification that increases during organism aging and bacterial growth arrest. Under severe thermal stress, it functions as part of a bi-chaperone system: the DnaK system and the ring-forming AAA+ chaperone ClpB (Hsp104) system, to promote cell survival. DnaK has also been shown to cooperate with GroEL and the ribosome-associated Escherichia coli Trigger Factor in the proper folding of cytosolic proteins. S. cerevisiae Ssc1p is the major HSP70 chaperone of the mitochondrial matrix, promoting translocation of proteins from the cytosol, across the inner membrane, to the matrix, and their subsequent folding. Ssc1p interacts with Tim44, a peripheral inner membrane protein associated with the TIM23 protein translocase. It is also a subunit of the endoSceI site-specific endoDNase and is required for full endoSceI activity. Ssc1p plays roles in the import of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Ssc1 also participates in translational regulation of cytochrome c oxidase (COX) biogenesis by interacting with Mss51 and Mss51-containing complexes. Length = 377

>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins

 Score =  325 bits (835), Expect = e-107
 Identities = 142/245 (57%), Positives = 184/245 (75%), Gaps = 5/245 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGIDLGTT SCVAV  +    II N +G RTTPS V+FT T  L+G+AAK Q A++P NT
Sbjct: 5   IGIDLGTTNSCVAVIDKTTPVIIENAEGKRTTPSIVSFTKTGILVGEAAKRQEALHPENT 64

Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
            F  KRLIGR+F D ++Q+ MK   + +V  R      +   G  K ++P +I+S VL K
Sbjct: 65  FFATKRLIGRQFKDVEVQRKMKVPYYKIVEGR-NGDAWIYTNG--KKYSPSQIASFVLKK 121

Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
           +K+TAEAYLG  V +AVITVPAYFND+QRQATKDAG +AGL V+RI+NEPTAAALAYG+D
Sbjct: 122 LKKTAEAYLGKRVDEAVITVPAYFNDSQRQATKDAGTLAGLKVLRIINEPTAAALAYGID 181

Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           K  K  +N+ ++DLGGGTFD+SIL+I++G +FEV++T GDT LGGEDFDN +V ++ +EF
Sbjct: 182 KR-KENKNIAVYDLGGGTFDISILNIEDG-VFEVKATNGDTMLGGEDFDNAIVQYIIKEF 239

Query: 244 KRKCR 248
           KRK +
Sbjct: 240 KRKYK 244

Ssq1p (also called Stress-seventy subfamily Q protein 1, Ssc2p, Ssh1p, mtHSP70 homolog) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). S. cerevisiae Ssq1p is a mitochondrial chaperone that is involved in iron-sulfur (Fe/S) center biogenesis. Ssq1p plays a role in the maturation of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Length = 373

>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score =  322 bits (828), Expect = e-103
 Identities = 143/248 (57%), Positives = 169/248 (68%), Gaps = 27/248 (10%)

Query: 1   MPAIGIDLGTTYSCVAVFQ-QGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 58
             AIGIDLGTT S VAV +  G  ++I N +G R TPS VAF+ + E L+G AAK Q   
Sbjct: 5   KKAIGIDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVD 64

Query: 59  NPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISS 118
           NP NT+F  KR IGR                      +  KI VE  G  K + PEEIS+
Sbjct: 65  NPENTIFSIKRKIGRG--------------------SNGLKISVEVDG--KKYTPEEISA 102

Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
           M+LTK+KE AEAYLG  V DAVITVPAYFNDAQRQATKDA  IAGLNV+R++NEPTAAAL
Sbjct: 103 MILTKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARIAGLNVLRLINEPTAAAL 162

Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
           AYGLDK    E+ VL++DLGGGTFDVS+L I +G +FEV +T GD HLGG+DFDN L+ +
Sbjct: 163 AYGLDK--GKEKTVLVYDLGGGTFDVSLLEIGDG-VFEVLATGGDNHLGGDDFDNALIDY 219

Query: 239 LAEEFKRK 246
           L  EFK K
Sbjct: 220 LVMEFKGK 227

Length = 579

>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional

 Score =  308 bits (790), Expect = 6e-97
 Identities = 136/246 (55%), Positives = 175/246 (71%), Gaps = 11/246 (4%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           +GIDLGTT S VAV + GK  +IAN +G RTTPS V FT D E L+G  A+ Q+ +NP+N
Sbjct: 5   VGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQN 64

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGER--KTFAPEEISSMV 120
           T ++ KR IGR++D+  +  + K  P+T+   R   +  V  K  R  + FAPEE+S+M+
Sbjct: 65  TFYNLKRFIGRRYDE--LDPESKRVPYTI---RRNEQGNVRIKCPRLEREFAPEELSAMI 119

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L K+ + A  YLG  V  AVITVPAYFND+QRQAT+DAG IAGL V RI+NEPTAAALAY
Sbjct: 120 LRKLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAGRIAGLEVERILNEPTAAALAY 179

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLD+     + VL+FDLGGGTFDVS+L +  G +FEV++T+GDT LGG DFD R+V  LA
Sbjct: 180 GLDR--SSSQTVLVFDLGGGTFDVSLLEVGNG-VFEVKATSGDTQLGGNDFDKRIVDWLA 236

Query: 241 EEFKRK 246
           E+F  K
Sbjct: 237 EQFLEK 242

Length = 668

>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins

 Score =  298 bits (766), Expect = 9e-97
 Identities = 126/250 (50%), Positives = 169/250 (67%), Gaps = 6/250 (2%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
             +GID G   S VAV ++G ++++AN+  NR TPS V+F + +RLIG+AAKNQ   N +
Sbjct: 1   SVVGIDFGNLNSVVAVARKGGIDVVANEYSNRETPSLVSFGEKQRLIGEAAKNQAISNFK 60

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRS-KPKIQVEFKGERKTFAPEEISSMV 120
           NTV + KRLIGRKFDDP++Q+++K  PF VV     K  I+V + GE K F+PE++ +M+
Sbjct: 61  NTVRNFKRLIGRKFDDPEVQKELKFLPFKVVELPDGKVGIKVNYLGEEKVFSPEQVLAML 120

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTK+KE AE  L   V D VI+VP+YF DAQR+A  DA  IAGLN +R++NE TA ALAY
Sbjct: 121 LTKLKEIAEKALKGKVTDCVISVPSYFTDAQRRALLDAAQIAGLNCLRLMNETTATALAY 180

Query: 181 GLDKNLKGE----RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236
           G+ K    E    RNV   D+G  +  VSI++ ++G L +V STA D +LGG DFD  L 
Sbjct: 181 GIYKTDLPEEEKPRNVAFVDIGHSSTQVSIVAFNKGKL-KVLSTAFDRNLGGRDFDEALF 239

Query: 237 SHLAEEFKRK 246
            H A+EFK K
Sbjct: 240 EHFAKEFKEK 249

This subgroup includes the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), Saccharomyces cerevisiae Sse1p and Sse2p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 381

>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional

 Score =  304 bits (781), Expect = 1e-95
 Identities = 134/244 (54%), Positives = 183/244 (75%), Gaps = 7/244 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           +GIDLGTT SCVA+ +  + ++I N +G RTTPS VAFT+  +RL+G  AK Q   NP N
Sbjct: 44  VGIDLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPEN 103

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVF  KRLIGR++D+   +++ K  P+ +V   S     +E +G++  ++P +I + VL 
Sbjct: 104 TVFATKRLIGRRYDEDATKKEQKILPYKIVRA-SNGDAWIEAQGKK--YSPSQIGAFVLE 160

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKETAE+YLG  V+ AVITVPAYFND+QRQATKDAG IAGL+V+RI+NEPTAAALA+G+
Sbjct: 161 KMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALAFGM 220

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DKN    + + ++DLGGGTFD+SIL I  G +FEV++T G+T LGGEDFD R++++L  E
Sbjct: 221 DKN--DGKTIAVYDLGGGTFDISILEI-LGGVFEVKATNGNTSLGGEDFDQRILNYLIAE 277

Query: 243 FKRK 246
           FK++
Sbjct: 278 FKKQ 281

Length = 663

>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70

 Score =  303 bits (777), Expect = 2e-95
 Identities = 140/244 (57%), Positives = 175/244 (71%), Gaps = 7/244 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           +GIDLGTT S VAV + GK  +I N +G RTTPS VA+T   + L+G  AK Q  +NP N
Sbjct: 5   VGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPEN 64

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T +  KR IGRKF +  I ++ K   + V  D S   I++E     K F+PEEIS+ VL 
Sbjct: 65  TFYSVKRFIGRKFSE--ISEEAKQVSYKVKTD-SNGNIKIECPALNKDFSPEEISAQVLR 121

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+ E A  YLG +V  AVITVPAYFND+QRQATKDAG IAGL V+RI+NEPTAA+LAYGL
Sbjct: 122 KLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGL 181

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK  K    +L+FDLGGGTFDVSIL + +G +FEV ST+GDTHLGG+DFD ++V+ L +E
Sbjct: 182 DK--KNNETILVFDLGGGTFDVSILEVGDG-VFEVLSTSGDTHLGGDDFDKKIVNWLIKE 238

Query: 243 FKRK 246
           FK+K
Sbjct: 239 FKKK 242

Length = 621

>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional

 Score =  301 bits (773), Expect = 1e-94
 Identities = 138/244 (56%), Positives = 178/244 (72%), Gaps = 8/244 (3%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVAV + GK  +I N +G RTTPS V F  + +RL+G  AK Q   N  N
Sbjct: 5   IGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAEN 64

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TV+  KR IGR++DD   +++    P+T V  R    + V+ +G  + + P+EIS+M+L 
Sbjct: 65  TVYSIKRFIGRRWDD--TEEERSRVPYTCVKGRDD-TVNVQIRG--RNYTPQEISAMILQ 119

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+ AEAYLG  V  AVITVPAYF DAQRQATKDAG IAGL V+RI+NEPTAAALAYGL
Sbjct: 120 KLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAGTIAGLEVLRIINEPTAAALAYGL 179

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK  + E+ +L+FDLGGGTFDVSIL + +G +FEV++TAG+ HLGG+DFDN +V  L E 
Sbjct: 180 DKQDQ-EQLILVFDLGGGTFDVSILQLGDG-VFEVKATAGNNHLGGDDFDNCIVDWLVEN 237

Query: 243 FKRK 246
           F+++
Sbjct: 238 FQQQ 241

Length = 653

>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional

 Score =  287 bits (736), Expect = 5e-89
 Identities = 130/284 (45%), Positives = 188/284 (66%), Gaps = 9/284 (3%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           V   ++  F GK  +  +NPDEAVA GAA+QA +L G+    I+D+LL+DVTPLSLGIET
Sbjct: 383 VSETVKKIF-GKEPSKGVNPDEAVAMGAAIQAGVLKGE----IKDLLLLDVTPLSLGIET 437

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
            GGV T+LI RNT IP K++Q F+T ADNQ  V I+VF+GER M  DN LLG FDL GIP
Sbjct: 438 LGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIP 497

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGI+N++A D S+GK Q ITI++  G LS EEI++M+ +AE Y
Sbjct: 498 PAPRGVPQIEVTFDVDANGIMNISAVDKSTGKKQEITIQSSGG-LSDEEIEKMVKEAEEY 556

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLA 503
           K++DEK+KE + A+N  E  +++V++ L D  +K+++++K   +++       L +    
Sbjct: 557 KEQDEKKKELVDAKNEAETLIYSVEKQLSDLKDKISDADKDELKQKITKLRSTLSSE--- 613

Query: 504 DKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGGPTVEE 547
           D +  +DK +QLQ++   +  + +      +            E
Sbjct: 614 DVDSIKDKTKQLQEASWKISQQAYKQGNSDNQQSEQSTNSEESE 657

Length = 663

>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score =  283 bits (726), Expect = 2e-88
 Identities = 140/263 (53%), Positives = 181/263 (68%), Gaps = 11/263 (4%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           VQ L++ FF GK    SINPDEAVA GAA+QAA+LSG+      DVLL+DV PLSLGIET
Sbjct: 325 VQELVKEFF-GKEPEKSINPDEAVALGAAIQAAVLSGEVP----DVLLLDVIPLSLGIET 379

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
            GGV T +IERNT IP K++Q F+T AD Q AV I VF+GER M  DN  LG F+L GIP
Sbjct: 380 LGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIP 439

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGILNVTAKD  +GK Q+ITIK   G LS EEI+RM+ DAE  
Sbjct: 440 PAPRGVPQIEVTFDIDANGILNVTAKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEAN 498

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLA 503
              D+K +E + ARN  E+ ++++++AL +   K++E EK +  E      + L+     
Sbjct: 499 AALDKKFRELVEARNEAESLIYSLEKALKEIV-KVSEEEKEKIEEAITDLEEALEG---- 553

Query: 504 DKEEYQDKLQQLQKSCMPLMSKM 526
           +KEE + K+++LQ+    L  K 
Sbjct: 554 EKEEIKAKIEELQEVTQKLAEKK 576

Length = 579

>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins

 Score =  273 bits (700), Expect = 3e-87
 Identities = 114/247 (46%), Positives = 154/247 (62%), Gaps = 9/247 (3%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTT S VA    GKV+I+ ++ G    PS V + D    +G  A      +P+N
Sbjct: 2   AIGIDLGTTNSLVASVLSGKVKILPDENGRVLLPSVVHYGDGGISVGHDALKLAISDPKN 61

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+   KRL+G+  +D  I++   + P     +         F  ++ T  P E+S+ +L 
Sbjct: 62  TISSVKRLMGKSIED--IKKSFPYLPILEGKNGGII----LFHTQQGTVTPVEVSAEILK 115

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
            +KE AE  LG  ++ AVITVPAYF+DAQRQATKDA  +AGLNV+R++NEPTAAALAYGL
Sbjct: 116 ALKERAEKSLGGEIKGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAALAYGL 175

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK  K E    ++DLGGGTFDVSIL + +G +FEV +T GD+ LGG+DFD  L   L ++
Sbjct: 176 DK--KKEGIYAVYDLGGGTFDVSILKLHKG-VFEVLATGGDSALGGDDFDQLLAELLLKK 232

Query: 243 FKRKCRS 249
           +  K   
Sbjct: 233 YGLKSLI 239

Escherichia coli HscA (heat shock cognate protein A, also called Hsc66), belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). HscA's partner J-domain protein is HscB; it does not appear to require a NEF, and has been shown to be induced by cold-shock. The HscA-HscB chaperone/co-chaperone pair is involved in [Fe-S] cluster assembly. Length = 355

>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins

 Score =  270 bits (692), Expect = 3e-86
 Identities = 113/253 (44%), Positives = 147/253 (58%), Gaps = 34/253 (13%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPRN 62
           IGIDLGTT S VAV+Q GK  +I N  G   TPS V+  +    L+G AA+ ++  +P  
Sbjct: 1   IGIDLGTTNSLVAVWQDGKARLIPNALGEYLTPSVVSVDEDGEILVGKAARERLITHPDL 60

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T    KR +G                              +++  ++ F  EE+SS+VL 
Sbjct: 61  TAASFKRFMGTD---------------------------KKYRLGKREFRAEELSSLVLR 93

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
            +KE AEAYLG  V +AVI+VPAYFND QR+ATK AG +AGL V R++NEPTAAALAYGL
Sbjct: 94  SLKEDAEAYLGEPVTEAVISVPAYFNDEQRKATKRAGELAGLKVERLINEPTAAALAYGL 153

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
                 E   L+FDLGGGTFDVS+L + +G + EVR++AGD +LGGEDF   L     E 
Sbjct: 154 HDK-DEETKFLVFDLGGGTFDVSVLELFDG-VMEVRASAGDNYLGGEDFTRALA----EA 207

Query: 243 FKRKCRSASDVGD 255
           F +K     +  D
Sbjct: 208 FLKKHGLDFEKLD 220

This subfamily includes Escherichia coli HscC (also called heat shock cognate protein C, Hsc62, or YbeW) and the the putative DnaK-like protein Escherichia coli ECs0689. It belongs to the heat shock protein 70 (Hsp70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, Hsp70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Two genes in the vicinity of the HscC gene code for potential cochaperones: J-domain containing proteins, DjlB/YbeS and DjlC/YbeV. HscC and its co-chaperone partners may play a role in the SOS DNA damage response. HscC does not appear to require a NEF. Length = 339

>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70

 Score =  276 bits (708), Expect = 3e-85
 Identities = 124/258 (48%), Positives = 178/258 (68%), Gaps = 11/258 (4%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           +Q L++    GK  N S+NPDE VA GAAVQA +L+G+    ++D+LL+DVTPLSLG+ET
Sbjct: 344 IQELVKKLL-GKKPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGVET 398

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
            GGVMTK+I RNT IP K+++ F+T  DNQ  V I V +GER + KDN  LGTF L GIP
Sbjct: 399 LGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIP 458

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGIL+VTAKD  +GK Q+ITI+     L K+E++RM+ +AE+ 
Sbjct: 459 PAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEQSITIQG-ASTLPKDEVERMVKEAEKN 517

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLA 503
             ED++++E+I  +N  E+  +  ++ L +  +K++E +K    E+ +  +K L      
Sbjct: 518 AAEDKEKREKIDLKNQAESLCYQAEKQLKELKDKISEEKK----EKIENLIKKLRQALQN 573

Query: 504 DK-EEYQDKLQQLQKSCM 520
           D  E  +  L++LQK+ M
Sbjct: 574 DNYESIKSLLEELQKALM 591

Length = 621

>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional

 Score =  277 bits (710), Expect = 4e-85
 Identities = 130/243 (53%), Positives = 166/243 (68%), Gaps = 7/243 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           +GIDLGTT S VA  + GK  I+ N +G RTTPS VA+T   +RL+G  AK Q  +NP N
Sbjct: 42  VGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPEN 101

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T F  KR IGRK  +  + ++ K   + VV D     ++++     K FA EEIS+ VL 
Sbjct: 102 TFFSVKRFIGRKMSE--VDEESKQVSYRVVRD-ENGNVKLDCPAIGKQFAAEEISAQVLR 158

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+ + A  +L   V  AVITVPAYFND+QR ATKDAG IAGL V+RI+NEPTAA+LAYG 
Sbjct: 159 KLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGF 218

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           +K  K    +L+FDLGGGTFDVS+L + +G +FEV ST+GDTHLGG+DFD R+V  LA  
Sbjct: 219 EK--KSNETILVFDLGGGTFDVSVLEVGDG-VFEVLSTSGDTHLGGDDFDKRIVDWLASN 275

Query: 243 FKR 245
           FK+
Sbjct: 276 FKK 278

Length = 673

>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional

 Score =  275 bits (706), Expect = 1e-84
 Identities = 120/275 (43%), Positives = 182/275 (66%), Gaps = 6/275 (2%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           VQ  +Q FF GK  + S+NPDEAVA GAA+QA +L G+    ++D+LL+DVTPLSLGIET
Sbjct: 343 VQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGE----VKDLLLLDVTPLSLGIET 398

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
            G V TK+IERNT IP  ++Q F+T  D Q +V I V +GERAM KDN  LG F LTGIP
Sbjct: 399 LGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIP 458

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+V+F++D NGIL V+A+D  +G+ Q+I I N  G LS  EI+RM  +AE+Y
Sbjct: 459 PAPRGVPQIEVSFEIDVNGILKVSAQDQGTGREQSIRITN-TGGLSSNEIERMRQEAEKY 517

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLA 503
            +ED ++K+ I  +N  ++ +++ +  L + G  ++E  K R  ++ +     L +  + 
Sbjct: 518 AEEDRRRKQLIELKNQADSLLYSYESTLKENGELISEELKQRAEQKVEQLEAALTDPNI- 576

Query: 504 DKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDM 538
             EE + +L++ Q++ + + ++++   G  +   +
Sbjct: 577 SLEELKQQLEEFQQALLAIGAEVYQQGGSQTTDTV 611

Length = 653

>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional

 Score =  273 bits (700), Expect = 5e-84
 Identities = 136/242 (56%), Positives = 177/242 (73%), Gaps = 5/242 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IG+DLGTTYSCVA     K  ++ N +G RTTPS VAF  +E+L+G AAK Q   NP++T
Sbjct: 30  IGVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGSEKLVGLAAKRQAITNPQST 89

Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
            +  KRLIGR+F+D  IQ+D+K+ P+ +V  R+         G  K ++P +I + VL K
Sbjct: 90  FYAVKRLIGRRFEDEHIQKDIKNVPYKIV--RAGNGDAWVQDGNGKQYSPSQIGAFVLEK 147

Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
           MKETAE +LGH V +AV+T PAYFNDAQRQATKDAG IAGLNV+R+VNEPTAAALAYG+D
Sbjct: 148 MKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMD 207

Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           K    +  + ++DLGGGTFD+S+L I  G +FEV++T GDTHLGGEDFD  L  ++ EEF
Sbjct: 208 KT--KDSLIAVYDLGGGTFDISVLEI-AGGVFEVKATNGDTHLGGEDFDLALSDYILEEF 264

Query: 244 KR 245
           ++
Sbjct: 265 RK 266

Length = 657

>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional

 Score =  264 bits (677), Expect = 8e-81
 Identities = 111/241 (46%), Positives = 157/241 (65%), Gaps = 10/241 (4%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           A+GIDLGTT S VA  + G+ E++ ++QG    PS V + +    +G  A+   A +P+N
Sbjct: 21  AVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLEDGIEVGYEARANAAQDPKN 80

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFT-VVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           T+   KR +GR   D  IQQ   H P+  V ++   P I+    G  K+  P E+S+ +L
Sbjct: 81  TISSVKRFMGRSLAD--IQQRYPHLPYQFVASENGMPLIRTAQ-GL-KS--PVEVSAEIL 134

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
             +++ AE  LG  +  AVITVPAYF+DAQRQATKDA  +AGLNV+R++NEPTAAA+AYG
Sbjct: 135 KALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYG 194

Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LD     E  + ++DLGGGTFD+SIL + +G +FEV +T GD+ LGG+DFD+ L   + E
Sbjct: 195 LDSG--QEGVIAVYDLGGGTFDISILRLSKG-VFEVLATGGDSALGGDDFDHLLADWILE 251

Query: 242 E 242
           +
Sbjct: 252 Q 252

Length = 616

>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins

 Score =  244 bits (625), Expect = 6e-76
 Identities = 101/245 (41%), Positives = 162/245 (66%), Gaps = 2/245 (0%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIG+  G T +C+AV++ G+ +++AND G+R TP+ VAFTDTE ++G AAK     N  N
Sbjct: 2   AIGVHFGNTSACLAVYKDGRADVVANDAGDRVTPAVVAFTDTEVIVGLAAKQGRIRNAAN 61

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+   K+++GR + DP  Q++       ++    +PK ++  + + K  +P+E++ ++  
Sbjct: 62  TIVKNKQILGRSYSDPFKQKEKTESSCKIIEKDGEPKYEIFTEEKTKHVSPKEVAKLIFK 121

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE A++ LG   +D VITVP YF++ Q+ A ++A   AG NV+RI++EP+AAALAYG+
Sbjct: 122 KMKEIAQSALGSDSKDVVITVPVYFSEKQKLALREAAEEAGFNVLRIIHEPSAAALAYGI 181

Query: 183 DKNLK-GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
            ++   G+  VL++ LGG + DV+IL ++ G ++ V +T+ D +LGGE F   L  +LA 
Sbjct: 182 GQDSPTGKSYVLVYRLGGTSTDVTILRVNSG-MYRVLATSTDDNLGGESFTETLSQYLAN 240

Query: 242 EFKRK 246
           EFKRK
Sbjct: 241 EFKRK 245

Human HSPA14 (also known as 70-kDa heat shock protein 14, HSP70L1, HSP70-4; the gene encoding HSPA14 maps to 10p13), is ribosome-associated and belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). HSPA14 interacts with the J-protein MPP11 to form the mammalian ribosome-associated complex (mRAC). HSPA14 participates in a pathway along with Nijmegen breakage syndrome 1 (NBS1, also known as p85 or nibrin), heat shock transcription factor 4b (HSF4b), and HSPA4 (belonging to a different subfamily), that induces tumor migration, invasion, and transformation. HSPA14 is a potent T helper cell (Th1) polarizing adjuvant that contributes to antitumor immune responses. Length = 375

>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins

 Score =  245 bits (627), Expect = 8e-76
 Identities = 113/246 (45%), Positives = 158/246 (64%), Gaps = 5/246 (2%)

Query: 4   IGIDLGTTYSCVAVFQ--QGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           IGIDLGTTYS V V+Q   G+ +II ++ G ++ PS VAFT    L+G  A  Q   NP+
Sbjct: 23  IGIDLGTTYSSVGVYQAGTGETDIIPDENGRKSIPSVVAFTPGTVLVGYKAVEQAEHNPQ 82

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMV 120
           NT++DAKR IG+ F   +++ +   + F V  + R+          E KT  PEEI S +
Sbjct: 83  NTIYDAKRFIGKIFTKEELEFESDRYRFKVKINSRNGAFFFSVLTNETKTVTPEEIGSRL 142

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           + K+++ AE YLG  V  AVI+VPA F++ QR AT  A  +AGL V+R++NEPTAAALAY
Sbjct: 143 ILKLRKMAEKYLGTPVGKAVISVPAEFDEKQRNATVKAANLAGLEVLRVINEPTAAALAY 202

Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GL K  +   NVL+ DLGGGT DVS+L+  +G +F  R+ AG+  LGG+DF+ RL+ +L 
Sbjct: 203 GLHKK-QDVFNVLVVDLGGGTLDVSLLNK-QGGMFLTRAMAGNNRLGGQDFNQRLLQYLY 260

Query: 241 EEFKRK 246
           ++   K
Sbjct: 261 QKIYEK 266

Human HSPA13 (also called 70-kDa heat shock protein 13, STCH, "stress 70 protein chaperone, microsome-associated, 60kD", "stress 70 protein chaperone, microsome-associated, 60kDa"; the gene encoding HSPA13 maps to 21q11.1) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). STCH contains an NBD but lacks an SBD. STCH may function to regulate cell proliferation and survival, and modulate the TRAIL-mediated cell death pathway. The HSPA13 gene is a candidate stomach cancer susceptibility gene; a mutation in the NBD coding region of HSPA13 has been identified in stomach cancer cells. The NBD of HSPA13 interacts with the ubiquitin-like proteins Chap1 and Chap2, implicating HSPA13 in regulating cell cycle and cell death events. HSPA13 is induced by the Ca2+ ionophore A23187. Length = 417

>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional

 Score =  250 bits (640), Expect = 5e-75
 Identities = 118/280 (42%), Positives = 181/280 (64%), Gaps = 11/280 (3%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 323
           VQ L++    GK  N+++NPDE VA GAAVQA +L+G+ S    D++L+DVTPLSLG+ET
Sbjct: 381 VQELVKKL-TGKDPNVTVNPDEVVALGAAVQAGVLAGEVS----DIVLLDVTPLSLGLET 435

Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
            GGVMTK+I RNT +P  +++ F+T AD Q +V I V +GER   +DN  LG+F L GIP
Sbjct: 436 LGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIP 495

Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+V FD+DANGIL+V+A D  +GK Q+ITI      L K+E++RM+ +AE++
Sbjct: 496 PAPRGVPQIEVKFDIDANGILSVSATDKGTGKKQDITITG-ASTLPKDEVERMVQEAEKF 554

Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLA 503
             ED+++++ +  +N  ++ V+  ++ L + G+K+    K    E+ +A LK L +   +
Sbjct: 555 AKEDKEKRDAVDTKNQADSVVYQTEKQLKELGDKVPADVK----EKVEAKLKELKDAIAS 610

Query: 504 DK-EEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGG 542
              ++ +D +  L +  M +   ++   G   AG  P G 
Sbjct: 611 GSTQKMKDAMAALNQEVMQIGQSLYNQPGAGGAGPAPGGE 650

Length = 673

>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional

 Score =  248 bits (635), Expect = 3e-74
 Identities = 110/255 (43%), Positives = 160/255 (62%), Gaps = 10/255 (3%)

Query: 263 VVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIE 322
           +VQ L++     +  N ++NPDE VA GAA+QA IL+G+    ++D+LL+DVTPLSLG+E
Sbjct: 343 MVQQLVRTLI-PREPNQNVNPDEVVAVGAAIQAGILAGE----LKDLLLLDVTPLSLGLE 397

Query: 323 TAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGI 382
           T GGVM KLI RNT IP +++  F+T  +NQ +V I V++GER M  DN  LG F L+GI
Sbjct: 398 TIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGI 457

Query: 383 PPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAER 442
           PPAPRGVP++ V FD+DANGIL V+A D ++G+ Q++TI+     LS++E++RMI +AE 
Sbjct: 458 PPAPRGVPQVQVAFDIDANGILQVSATDRTTGREQSVTIQG-ASTLSEQEVNRMIQEAEA 516

Query: 443 YKDEDEKQKERISARNNLEAYVFNVKQALDDA----GNKLTESEKSRCREECDATLKWLD 498
             DED +++ERI  RN     +   ++ L DA    G    E ++             L+
Sbjct: 517 KADEDRRRRERIEKRNRALTLIAQAERRLRDAALEFGPYFAERQRRAVESAMRDVQDSLE 576

Query: 499 NNTLADKEEYQDKLQ 513
            +   + +     LQ
Sbjct: 577 QDDDRELDLAVADLQ 591

Length = 668

>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional

 Score =  225 bits (574), Expect = 1e-65
 Identities = 121/266 (45%), Positives = 175/266 (65%), Gaps = 7/266 (2%)

Query: 272 FCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKL 331
           F  K     +NPDEAVA GAA    +L GD    ++ ++L+DVTPLSLGIET GGV T++
Sbjct: 376 FFQKDPFRGVNPDEAVALGAATLGGVLRGD----VKGLVLLDVTPLSLGIETLGGVFTRM 431

Query: 332 IERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPK 391
           I +NT IP K++QTF+T ADNQ  V I+VF+GER M  DN ++G FDL GIPPAPRGVP+
Sbjct: 432 IPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQ 491

Query: 392 IDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQK 451
           I+VTFD+DANGI +VTAKD ++GK+QNITI  + G LSKE+I++MI D+E++ + D  ++
Sbjct: 492 IEVTFDIDANGICHVTAKDKATGKTQNITITANGG-LSKEQIEQMIRDSEQHAEADRVKR 550

Query: 452 ERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDK 511
           E +  RNN E  +   ++ L +    ++++EK   +       K ++N  +A K++    
Sbjct: 551 ELVEVRNNAETQLTTAERQLGE-WKYVSDAEKENVKTLVAELRKAMENPNVA-KDDLAAA 608

Query: 512 LQQLQKSCMPLMSKMHGGAGGASAGD 537
             +LQK+ M      +  A  A++G 
Sbjct: 609 TDKLQKAVMECGRTEYQQAAAANSGS 634

Length = 657

>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1

 Score =  203 bits (517), Expect = 5e-60
 Identities = 101/249 (40%), Positives = 151/249 (60%), Gaps = 7/249 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           +G D+G     +AV + G +E +AN+  +R TPS ++F    R IG AAKNQ   +  NT
Sbjct: 3   VGFDVGFQSCYIAVARAGGIETVANEFSDRCTPSVISFGSKNRTIGVAAKNQQITHANNT 62

Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR  GR F+DP +Q++ ++  + +V        ++V + GE   F+ E+I++M+LT
Sbjct: 63  VSNFKRFHGRAFNDPFVQKEKENLSYDLVPLKNGGVGVKVMYMGEEHLFSVEQITAMLLT 122

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+KETAE  L   V D VI+VP++F DA+R++  DA  I GLN +R++N+ TA AL YG+
Sbjct: 123 KLKETAENNLKKPVTDCVISVPSFFTDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGI 182

Query: 183 DK-NLKGE----RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K +L       R V+  D+G   F VS  + ++G L +V  TA D  LGG++FD +LV 
Sbjct: 183 YKQDLPSLDEKPRIVVFVDMGHSAFQVSACAFNKGKL-KVLGTAFDPFLGGKNFDEKLVE 241

Query: 238 HLAEEFKRK 246
           H   EFK K
Sbjct: 242 HFCAEFKTK 250

Human HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3) suppresses the aggregation of denatured proteins caused by heat shock in vitro, and may substitute for HSP70 family proteins to suppress the aggregation of denatured proteins in cells under severe stress. It reduces the protein aggregation and cytotoxicity associated with Polyglutamine (PolyQ) diseases, including Huntington's disease, which are a group of inherited neurodegenerative disorders sharing the characteristic feature of having insoluble protein aggregates in neurons. The expression of HSPH1 is elevated in various malignant tumors, including malignant melanoma, and there is a direct correlation between HSPH1 expression and B-cell non-Hodgkin lymphomas (B-NHLs) aggressiveness and proliferation. HSPH1 belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins

 Score =  202 bits (515), Expect = 1e-59
 Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 15/257 (5%)

Query: 4   IGIDLGTTYSCVAVFQQGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           +GIDLG+ +  VA+ + G   EI+ N++  R TPS VAF   ERL G  A +  A  P+ 
Sbjct: 1   LGIDLGSEWIKVALVKPGVPFEIVLNEESKRKTPSAVAFKGGERLFGSDASSLAARFPQQ 60

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTV-VNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
                K L+G+  DDP +       P    V D S+  +  +     + ++ EE+ +M+L
Sbjct: 61  VYLHLKDLLGKPADDPSVSLYQSRHPLPYLVVDESRGTVAFKISDG-EEYSVEELVAMIL 119

Query: 122 TKMKETAEAYLG-HSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
              K+ AE +     V+D VITVP YF  AQRQA  DA  +AGLNV+ +VN+ TAAAL Y
Sbjct: 120 NYAKKLAEEHAKEAPVKDVVITVPPYFTQAQRQALLDAAELAGLNVLALVNDGTAAALNY 179

Query: 181 GLDKNLKGER--NVLIFDLGGGTFDVSILSID--------EGAL-FEVRSTAGDTHLGGE 229
            LD+  +  +   VL +D+G G+   +++           +     EV     D  LGG 
Sbjct: 180 ALDRRFENNKPQYVLFYDMGAGSTTATVVEFSPVEEKEKSKTVPQIEVLGVGWDRTLGGR 239

Query: 230 DFDNRLVSHLAEEFKRK 246
           +FD RL  HLA+EF+ K
Sbjct: 240 EFDLRLADHLAKEFEEK 256

This subgroup includes human HYOU1 (also known as human hypoxia up-regulated 1, GRP170; HSP12A; ORP150; GRP-170; ORP-150; the human HYOU1 gene maps to11q23.1-q23.3) and Saccharomyces cerevisiae Lhs1p (also known as Cer1p, SsI1). Mammalian HYOU1 functions as a nucleotide exchange factor (NEF) for HSPA5 (alos known as BiP, Grp78 or HspA5) and may also function as a HSPA5-independent chaperone. S. cerevisiae Lhs1p, does not have a detectable endogenous ATPase activity like canonical HSP70s, but functions as a NEF for Kar2p; it's interaction with Kar2p is stimulated by nucleotide-binding. In addition, Lhs1p has a nucleotide-independent holdase activity that prevents heat-induced aggregation of proteins in vitro. This subgroup belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as NEFs, to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 388

>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional

 Score =  205 bits (524), Expect = 9e-59
 Identities = 93/226 (41%), Positives = 144/226 (63%), Gaps = 12/226 (5%)

Query: 263 VVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIE 322
           +V+  +  FF G++   SI+PD+ VA GAA+QA IL+G++  +  D+LL+DV PLSLG+E
Sbjct: 343 LVREAVGEFF-GRTPLTSIDPDKVVAIGAAIQADILAGNKPDS--DMLLLDVIPLSLGLE 399

Query: 323 TAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGI 382
           T GG++ K+I RNT IP  + Q FTT+ D Q A+ I V +GER +  D   L  F+L GI
Sbjct: 400 TMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGI 459

Query: 383 PPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAER 442
           PP   G  +I VTF +DA+G+L+VTA + S+G   +I +K   G L+ +EI RM+ D+  
Sbjct: 460 PPMAAGAARIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDDEIARMLKDSMS 518

Query: 443 YKDEDEKQK----ERISARNNLEAYVFNVKQALDDAGNKLTESEKS 484
           + +ED + +    +++ A   LEA    ++ AL   G+ L+ +E++
Sbjct: 519 HAEEDMQARALAEQKVEAERVLEA----LQAALAADGDLLSAAERA 560

Length = 616

>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins

 Score =  194 bits (494), Expect = 1e-56
 Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 6/250 (2%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
             IGI+ G TYS +A   QGK ++IAN+ G R  PS +++   +   G+ AK Q+  N +
Sbjct: 1   TVIGINFGNTYSSIACINQGKADVIANEDGERQIPSAISYHGEQEYHGNQAKAQLIRNAK 60

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMK--HWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSM 119
           NT+ + + L+G+ F +  +         P  V++     + + E   +       E++  
Sbjct: 61  NTITNFRDLLGKPFSEIDVSAAAAAAPVPVAVIDVGGTVQEKEEPVPKETILTVHEVTVR 120

Query: 120 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALA 179
            L ++KE AE +LG  V  AV++VP +F+D Q +A   A   AGL V++++ EP AA LA
Sbjct: 121 FLRRLKEAAEDFLGKKVAGAVLSVPTWFSDEQTEALVKAAEAAGLPVLQLIPEPAAALLA 180

Query: 180 YGLDKN---LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236
           Y   +       +RNV++ D GG   DVS++++  G L+ + +TA D  LGG+  D+ LV
Sbjct: 181 YDAGEPTEDEALDRNVVVADFGGTRTDVSVIAVRGG-LYTILATAHDPGLGGDTLDDALV 239

Query: 237 SHLAEEFKRK 246
            H A+EF +K
Sbjct: 240 KHFAKEFTKK 249

Saccharomyces cerevisiae Ssz1p (also known as /Pdr13p/YHR064C) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but rather, function as NEFs for their Hsp70 partners, while other family members function as both chaperones and NEFs. Ssz1 does not function as a chaperone; it facilitates the interaction between the HSP70 Ssb protein and its partner J-domain protein Zuo1 (also known as zuotin) on the ribosome. Ssz1 is found in a stable heterodimer (called RAC, ribosome associated complex) with Zuo1. Zuo1 can only stimulate the ATPase activity of Ssb, when it is in complex with Ssz1. Ssz1 binds ATP but neither nucleotide-binding, hydrolysis, or its SBD, is needed for its in vivo function. Length = 386

>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4

 Score =  192 bits (489), Expect = 5e-56
 Identities = 104/249 (41%), Positives = 152/249 (61%), Gaps = 7/249 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           +GIDLG     VAV + G +E IAN+  +R TP+ ++F    R IG AAK+QV  N +NT
Sbjct: 3   VGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACISFGPKNRSIGAAAKSQVISNAKNT 62

Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V   KR  GR F DP +Q +     + +V        I+V +  E + F  E++++M+LT
Sbjct: 63  VQGFKRFHGRAFSDPFVQAEKPSLAYDLVQLPTGSTGIKVMYMEEERNFTTEQVTAMLLT 122

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+KETAE+ L   V D V++VP ++ DA+R++  DA  IAGLN +R++NE TA ALAYG+
Sbjct: 123 KLKETAESALKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGI 182

Query: 183 DKN-----LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K       +  RNV+  D+G   + VS+ + ++G L +V +TA DT LGG  FD  LV+
Sbjct: 183 YKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKL-KVLATAFDTTLGGRKFDEVLVN 241

Query: 238 HLAEEFKRK 246
           +  EEF +K
Sbjct: 242 YFCEEFGKK 250

Human HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1) responds to acidic pH stress, is involved in the radioadaptive response, is required for normal spermatogenesis and is overexpressed in hepatocellular carcinoma. It participates in a pathway along with NBS1 (Nijmegen breakage syndrome 1, also known as p85 or nibrin), heat shock transcription factor 4b (HDF4b), and HSPA14 (belonging to a different HSP70 subfamily) that induces tumor migration, invasion, and transformation. HSPA4 expression in sperm was increased in men with oligozoospermia, especially in those with varicocele. HSPA4 belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins

 Score =  188 bits (478), Expect = 2e-54
 Identities = 92/249 (36%), Positives = 140/249 (56%), Gaps = 7/249 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
            G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +NT
Sbjct: 1   FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 60

Query: 64  VFDAKRLIGRKFDDPKIQQDMKH-WPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR+IG  +  P  +Q+ KH     V  D  K   +V F GE+  F+  ++++M + 
Sbjct: 61  VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 120

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++YG+
Sbjct: 121 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 180

Query: 183 --DKNLKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
                 +GE   R V   D+G  ++  SI++  +G L +V  TA D H GG DFD  +  
Sbjct: 181 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIVAFKKGQL-KVLGTACDKHFGGRDFDLAITE 239

Query: 238 HLAEEFKRK 246
           H A+EFK K
Sbjct: 240 HFADEFKTK 248

This subfamily include the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), HYOU1 (also known as human hypoxia up-regulated 1, GRP170; HSP12A; ORP150; GRP-170; ORP-150; the human HYOU1 gene maps to11q23.1-q23.3), Saccharomyces cerevisiae Sse1p, Sse2p, and Lhs1p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is also regulated by J-domain proteins. Length = 377

>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L

 Score =  182 bits (462), Expect = 4e-52
 Identities = 97/249 (38%), Positives = 151/249 (60%), Gaps = 7/249 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           +GIDLG     +AV + G +E IAN+  +R TP+ ++     R IG+AAK+Q+  N RNT
Sbjct: 3   VGIDLGFLNCYIAVARSGGIETIANEYSDRCTPACISLGSRTRAIGNAAKSQIVTNVRNT 62

Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           +   K+L GR FDDP +Q +    P+ +         ++V +  E + FA E+++ M+L 
Sbjct: 63  IHGFKKLHGRSFDDPIVQTERIRLPYELQKMPNGSVGVKVRYLEEERPFAIEQVTGMLLA 122

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+KET+E  L   V D VI++P++F DA+R++   A  +AGLN +R++NE TA ALAYG+
Sbjct: 123 KLKETSENALKKPVADCVISIPSFFTDAERRSVMAAAQVAGLNCLRLMNETTAVALAYGI 182

Query: 183 DKN-----LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K       +  RNV+  D+G   + VS+ + ++G L +V +T  D +LGG +FD  LV 
Sbjct: 183 YKQDLPALDEKPRNVVFIDMGHSAYQVSVCAFNKGKL-KVLATTFDPYLGGRNFDEALVD 241

Query: 238 HLAEEFKRK 246
           +  +EFK K
Sbjct: 242 YFCDEFKTK 250

Human HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28) is expressed ubiquitously and predominantly in the testis. It is required for normal spermatogenesis and plays a role in osmotolerance. HSPA4L belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional

 Score =  170 bits (433), Expect = 3e-46
 Identities = 92/245 (37%), Positives = 131/245 (53%), Gaps = 24/245 (9%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           A+GID GTT S +A+    KV++I +       P+ + FT     IG+            
Sbjct: 21  AVGIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSNNFTIGN----------NK 70

Query: 63  TVFDAKRLIGRKFDD----PKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISS 118
            +   KRL G+   +    P +   +K +   +  + S+ K+        K     EI++
Sbjct: 71  GLRSIKRLFGKTLKEILNTPALFSLVKDY---LDVNSSELKLNFA----NKQLRIPEIAA 123

Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
            +   +K  AE  L  ++  AVITVPA+FNDA R     A  IAG  V+R++ EPTAAA 
Sbjct: 124 EIFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVMLAAKIAGFEVLRLIAEPTAAAY 183

Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
           AYGL+KN KG    L++DLGGGTFDVSIL+I EG +F+V +T GD  LGG D D  +  +
Sbjct: 184 AYGLNKNQKG--CYLVYDLGGGTFDVSILNIQEG-IFQVIATNGDNMLGGNDIDVVITQY 240

Query: 239 LAEEF 243
           L  +F
Sbjct: 241 LCNKF 245

Length = 595

>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional

 Score =  166 bits (421), Expect = 1e-44
 Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 5/204 (2%)

Query: 281 INPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPC 340
           I+PD+AV +GAA+QA  L     +   + LL+DV PLSLG+E  GG++ K+I RNT IP 
Sbjct: 340 IDPDKAVVWGAALQAENLI----APHTNSLLIDVVPLSLGMELYGGIVEKIIMRNTPIPI 395

Query: 341 KQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 400
              + FTTYADNQ  +   + +GER M  D   L  F+L G+PP   G  + +VTF +DA
Sbjct: 396 SVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDA 455

Query: 401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNL 460
           +GIL+V+A +  S  S  I +K + G + K EID M+ +A +    D   +    A    
Sbjct: 456 DGILSVSAYEKISNTSHAIEVKPNHG-IDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEA 514

Query: 461 EAYVFNVKQALDDAGNKLTESEKS 484
           EA +FN+++A+ +    L+ESE S
Sbjct: 515 EALIFNIERAIAELTTLLSESEIS 538

Length = 595

>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins

 Score =   99 bits (250), Expect = 1e-22
 Identities = 73/254 (28%), Positives = 107/254 (42%), Gaps = 45/254 (17%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTER------LIGDAAKNQVA 57
           +GID GT+ S VAV + G+  ++  + G+ T PS + F   E       L G AA     
Sbjct: 1   LGIDFGTSNSAVAVARDGQPRLVPLEGGSTTLPSALFFPHEESALEREVLFGRAAIAAYL 60

Query: 58  MNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEIS 117
             P        RL+          + +K    + +      + ++   G R TF  E++ 
Sbjct: 61  EGPGEG-----RLM----------RSLK----SFLGSSLFRETRI--FGRRLTF--EDLV 97

Query: 118 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ----RQATKDAGAI---AGLNVMRIV 170
           +  L ++K+ AEA LG  +   VI  P +F         QA     A    AG   +   
Sbjct: 98  ARFLAELKQRAEAALGAEIDRVVIGRPVHFVGDDEAADAQAEARLRAAARAAGFKDVEFQ 157

Query: 171 NEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID-EGALFEVRS-----TAGDT 224
            EP AAAL Y   + L  E  VL+ D+GGGT D S++ +         R       +G  
Sbjct: 158 YEPIAAALDYE--QRLTREELVLVVDIGGGTSDFSLVRLGPSRRGRADRRADILAHSG-V 214

Query: 225 HLGGEDFDNRLVSH 238
            +GG DFD RL  H
Sbjct: 215 RIGGTDFDRRLSLH 228

This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs. Length = 415

>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299
           VQ LLQ+FF GK LN SINPDEAVAYGAAVQAAILS
Sbjct: 341 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 376

This subfamily includes human HSPA1A (70-kDa heat shock protein 1A, also known as HSP72; HSPA1; HSP70I; HSPA1B; HSP70-1; HSP70-1A), HSPA1B (70-kDa heat shock protein 1B, also known as HSPA1A; HSP70-2; HSP70-1B), and HSPA1L (70-kDa heat shock protein 1-like, also known as HSP70T; hum70t; HSP70-1L; HSP70-HOM). The genes for these three HSPA1 proteins map in close proximity on the major histocompatibility complex (MHC) class III region on chromosome 6, 6p21.3. This subfamily also includes human HSPA8 (heat shock 70kDa protein 8, also known as LAP1; HSC54; HSC70; HSC71; HSP71; HSP73; NIP71; HSPA10; the HSPA8 gene maps to 11q24.1), human HSPA2 (70-kDa heat shock protein 2, also known as HSP70-2; HSP70-3, the HSPA2 gene maps to 14q24.1), human HSPA6 (also known as heat shock 70kDa protein 6 (HSP70B') gi 94717614, the HSPA6 gene maps to 1q23.3), human HSPA7 (heat shock 70kDa protein 7 , also known as HSP70B; the HSPA7 gene maps to 1q23.3) and Saccharmoyces cerevisiae Stress-Seventy subfamily B/Ssb1p. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Associations of polymorphisms within the MHC-III HSP70 gene locus with longevity, systemic lupus erythematosus, Meniere's disease, noise-induced hearing loss, high-altitude pulmonary edema, and coronary heart disease, have been found. HSPA2 is involved in cancer cell survival, is required for maturation of male gametophytes, and is linked to male infertility. The induction of HSPA6 is a biomarker of cellular stress. HSPA8 participates in the folding and trafficking of client proteins to different subcellular compartments, and in the signal transduction and apoptosis process; it has been shown to protect cardiomyocytes against oxidative stress partly through an interaction with alpha-enolase. S. cerevisiae Ssb1p, is part of the ribosome-associated complex (RAC), it acts as a chaperone for nascent polypeptides, and is important for translation fidelity; Ssb1p is also a [PSI+] prion-curing factor. Length = 376

>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins

 Score = 73.9 bits (182), Expect = 4e-14
 Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 47/277 (16%)

Query: 4   IGIDLGTTYSCVA-VFQQGKVEII--------ANDQGNRTTPSYVAFTDTERLI--GDAA 52
           +GID GTT+S VA  F       I           +G    P+ + +    +L+  G  A
Sbjct: 3   VGIDFGTTFSGVAYAFLDSSPPDIRVITRWPGGEGRGYCKVPTEILYDPEGKLVAWGYEA 62

Query: 53  KNQVAMNPRNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFA 112
           +            +A+      F+  K+  D         +D+ KP          KT  
Sbjct: 63  E------REYAELEAEDEGWLFFEWFKLLLD-PDALKLQGDDKLKPL------PPGKT-- 107

Query: 113 PEEISSMVLTKMKETAEAYLGHSVRDA---------VITVPAYFNDAQRQATKDAGAIAG 163
             ++ +  L  + E A   L  +  +          V+TVPA ++DA +QA ++A   AG
Sbjct: 108 AVDVIADYLRYLYEHALEELKKTYGNGEFTALDIEWVLTVPAIWSDAAKQAMREAAIKAG 167

Query: 164 LNVMR-------IVNEPTAAALA---YGL-DKNLKGERNVLIFDLGGGTFDVSILSIDEG 212
           L   R       IV EP AAAL      L   NLK     L+ D GGGT D+++  +   
Sbjct: 168 LVSSREGPDRLLIVLEPEAAALYCLKLLLISLNLKPGDGFLVCDAGGGTVDLTVYEVTSV 227

Query: 213 ALFEVR-STAGDTHLGGEDFDNRLVSHLAEEFKRKCR 248
               ++   AG   L G  F +R    L +E   +  
Sbjct: 228 EPLRLKELAAGSGGLCGSTFVDRAFEELLKERLGELF 264

Human HSPA12A (also known as 70-kDa heat shock protein-12A) and HSPA12B (also known as 70-kDa heat shock protein-12B, chromosome 20 open reading frame 60/C20orf60, dJ1009E24.2) belong to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A or HSPA12B. The gene encoding HSPA12A maps to 10q26.12, a cytogenetic region that might represent a common susceptibility locus for both schizophrenia and bipolar affective disorder; reduced expression of HSPA12A has been shown in the prefrontal cortex of subjects with schizophrenia. HSPA12A is also a candidate gene for forelimb-girdle muscular anomaly, an autosomal recessive disorder of Japanese black cattle. HSPA12A is predominantly expressed in neuronal cells. It may also play a role in the atherosclerotic process. The gene encoding HSPA12B maps to 20p13. HSPA12B is predominantly expressed in endothelial cells, is required for angiogenesis, and may interact with known angiogenesis mediators. It may be important for host defense in microglia-mediated immune response. HSPA12B expression is up-regulated in lipopolysaccharide (LPS)-induced inflammatory response in the spinal cord, and mostly located in active microglia; this induced expression may be regulated by activation of MAPK-p38, ERK1/2 and SAPK/JNK signaling pathways. Overexpression of HSPA12B also protects against LPS-induced cardiac dysfunction and involves the preserved activation of the PI3K/Akt signaling pathway. Length = 404

>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins

 Score = 68.6 bits (169), Expect = 1e-12
 Identities = 91/388 (23%), Positives = 145/388 (37%), Gaps = 139/388 (35%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERL--IGDAAKNQVAMNP 60
           IGIDLGT  + V V  +G   I+ N+      PS VA  T T ++  +G+          
Sbjct: 1   IGIDLGTANTLVYVKGKG---IVLNE------PSVVAIDTKTGKILAVGE---------- 41

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
                +AK ++GR                                       P  I   V
Sbjct: 42  -----EAKEMLGR--------------------------------------TPGNI--EV 56

Query: 121 LTKMK-------ETAEAYLGHSVRDA-----------VITVPAYFNDAQRQATKDAGAIA 162
           +  +K       E  EA L + ++             VI VP+   + +R+A  DA   A
Sbjct: 57  IRPLKDGVIADFEATEAMLRYFIKKVKGRSLFFRPRVVICVPSGITEVERRAVIDAALHA 116

Query: 163 GLNVMRIVNEPTAAALAYGLD-KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTA 221
           G   + ++ EP AAA+  GLD    KG    ++ D+GGGT +++++S+  G +   +S  
Sbjct: 117 GAREVYLIEEPLAAAIGAGLDIFEPKG---NMVVDIGGGTTEIAVISL--GGIVVSKS-- 169

Query: 222 GDTHLGGEDFDNRLVSHL------------AEEFKRKCRSASDVGDHHGDAHFVVQSLLQ 269
               +GG+DFD  ++ ++            AEE K +  SA  +     +    V     
Sbjct: 170 --IRVGGDDFDEAIIRYVRRKYNLLIGERTAEEIKIEIGSAYPL---DEEETMEV----- 219

Query: 270 NFFCGKSLNLSIN--PDEAVAYGAAVQAAILSGDQS--SAIQDVLLVDVTPLSL------ 319
               G+ L   +   P         V+ A+         AI+ VL  + TP  L      
Sbjct: 220 ---KGRDL---VTGLPRTVEVTSEEVREALKEPLDEIVEAIKSVL--EKTPPELAADILD 271

Query: 320 -GIETAGGV-----MTKLIERNTRIPCK 341
            GI   GG      + +LI   T +P +
Sbjct: 272 RGIVLTGGGALLRGLDELISEETGLPVR 299

MreB is a bacterial protein which assembles into filaments resembling those of eukaryotic F-actin. It is involved in determining the shape of rod-like bacterial cells, by assembling into large fibrous spirals beneath the cell membrane. MreB has also been implicated in chromosome segregation; specifically MreB is thought to bind to and segregate the replication origin of bacterial chromosomes. Length = 320

>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins

 Score = 58.5 bits (142), Expect = 4e-09
 Identities = 23/33 (69%), Positives = 25/33 (75%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 296
           VQ LL+ FF GK  +  INPDEAVAYGAAVQA 
Sbjct: 342 VQQLLKEFFNGKEPSRGINPDEAVAYGAAVQAG 374

This subfamily includes human HSPA5 (also known as 70-kDa heat shock protein 5, glucose-regulated protein 78/GRP78, and immunoglobulin heavy chain-binding protein/BIP, MIF2; the gene encoding HSPA5 maps to 9q33.3.), Sacchaormyces cerevisiae Kar2p (also known as Grp78p), and related proteins. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. HSPA5 and Kar2p are chaperones of the endoplasmic reticulum (ER). Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Multiple ER DNAJ domain proteins have been identified and may exist in distinct complexes with HSPA5 in various locations in the ER, for example DNAJC3-p58IPK in the lumen. HSPA5-NEFs include SIL1 and an atypical HSP70 family protein HYOU1/ORP150. The ATPase activity of Kar2p is stimulated by the NEFs: Sil1p and Lhs1p. Length = 374

>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 13/126 (10%)

Query: 98  PKIQVEFKGERKTFA-PEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQAT- 155
           P+  V     R       +     L ++ + A   L   +    IT P       R+   
Sbjct: 23  PEEIVPTPVGRPGAVTDLDELEEALRELLKEALRQLKSEIDAVGITEPGGVPKENREVII 82

Query: 156 ---------KDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSI 206
                      A    G   + +VN+  AAALA GL    K E  VL+ DLG GT  ++I
Sbjct: 83  LPNLLLIPLALALEDLGGVPVAVVNDAVAAALAEGLF--GKEEDTVLVVDLGTGTTGIAI 140

Query: 207 LSIDEG 212
           +   +G
Sbjct: 141 VEDGKG 146

This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185

>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein

 Score = 54.9 bits (133), Expect = 4e-08
 Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 61/246 (24%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERLI--GDAAKNQVAMNP 60
           IGIDLGT  + V V  +G   I+ N+      PS VA  T T++++  G+ AK  +   P
Sbjct: 4   IGIDLGTANTLVYVKGKG---IVLNE------PSVVAINTKTKKVLAVGNEAKKMLGRTP 54

Query: 61  RNTVFDAKR-LIGRKFDDPKIQQDM-KHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISS 118
            N V  A R L      D ++ + M K++   V   RS  K +V                
Sbjct: 55  GNIV--AVRPLKDGVIADFEVTEAMLKYFIKKVHGRRSLSKPRV---------------- 96

Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
                                VI VP+   + +R+A K+A   AG   + ++ EP AAA+
Sbjct: 97  ---------------------VICVPSGITEVERRAVKEAAKNAGAREVFLIEEPMAAAI 135

Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
             GL   ++     ++ D+GGGT +V+++S+  G +   +S      + G++ D  ++ +
Sbjct: 136 GAGL--PVEEPTGNMVVDIGGGTTEVAVISL--GGIVTSKS----VRVAGDEMDEAIIKY 187

Query: 239 LAEEFK 244
           + +++ 
Sbjct: 188 IRKKYN 193

This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl. Length = 327

>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 77/273 (28%)

Query: 4   IGIDLGTTYSCVAVFQQGKV----EIIANDQG-NRTTPSYVAFTDTERLIGDAAKNQVAM 58
           IGIDLGT  + V V  +G V     ++A     +  T S +A       +G  AK  +  
Sbjct: 5   IGIDLGTANTLVYVKGRGIVLNEPSVVAIRTDRDAKTKSILA-------VGHEAKEMLGK 57

Query: 59  NPRNTVFDAKR-LIGRKFDDPKIQQDM-KHWPFTVVNDRS--KPKIQVEFKGERKTFAPE 114
            P N V  A R +      D ++ + M K++   V + +S  KP+I              
Sbjct: 58  TPGNIV--AIRPMKDGVIADFEVTEKMIKYFIKQVHSRKSFFKPRI-------------- 101

Query: 115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPT 174
                                    VI VP+     +R+A K++   AG   + ++ EP 
Sbjct: 102 -------------------------VICVPSGITPVERRAVKESALSAGAREVYLIEEPM 136

Query: 175 AAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR 234
           AAA+  GL   ++     ++ D+GGGT +V+++S+  G +   RS      +GG++FD  
Sbjct: 137 AAAIGAGLP--VEEPTGSMVVDIGGGTTEVAVISL--GGIVVSRS----IRVGGDEFDEA 188

Query: 235 LVSHL------------AEEFKRKCRSASDVGD 255
           +++++            AE  K +  SA  + D
Sbjct: 189 IINYIRRTYNLLIGEQTAERIKIEIGSAYPLND 221

MreB (mecillinam resistance) in E. coli (also called envB) and the paralogous pair MreB and Mrl of Bacillus subtilis have all been shown to help determine cell shape. This protein is present in a wide variety of bacteria, including spirochetes, but is missing from the Mycoplasmas and from Gram-positive cocci. Most completed bacterial genomes have a single member of this family. In some species it is an essential gene. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 333

>gnl|CDD|237904 PRK15080, PRK15080, ethanolamine utilization protein EutJ; Provisional

 Score = 52.5 bits (127), Expect = 1e-07
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 51/156 (32%)

Query: 120 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQAT--KDAGAI------AGLNVMRIVN 171
           ++ ++K T E  LG  +  A   +P          T   D  AI      AGL V  +++
Sbjct: 72  IVRRLKATLEEKLGRELTHAATAIPP--------GTSEGDPRAIINVVESAGLEVTHVLD 123

Query: 172 EPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL-------SIDEGALFEVRSTAGDT 224
           EPTAAA   G+D       N  + D+GGGT  +SIL       S DE        T G T
Sbjct: 124 EPTAAAAVLGID-------NGAVVDIGGGTTGISILKDGKVVYSADE-------PTGG-T 168

Query: 225 HLG-------GEDFDNRLVSHLAEEFKRKCRSASDV 253
           H+        G  F+       AE++KR  +   ++
Sbjct: 169 HMSLVLAGAYGISFEE------AEQYKRDPKHHKEI 198

Length = 267

>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins

 Score = 52.3 bits (126), Expect = 3e-07
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 298
           VQ L++  F GK  N  +NPDE VA GAA+Q  +L
Sbjct: 343 VQELVKELF-GKEPNKGVNPDEVVAIGAAIQGGVL 376

This subfamily includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, Saccharomyces cerevisiae Stress-seventy subfamily Q protein 1/Ssq1p (also called Ssc2p, Ssh1p, mtHSP70 homolog), and S. cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. Length = 376

>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional

 Score = 51.8 bits (125), Expect = 5e-07
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 62/245 (25%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTE-------RLIGDAAKNQV 56
           IG D GT    VAV + GK  ++  +  +   PS +     E       R +   A +  
Sbjct: 3   IGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDE 62

Query: 57  -------AMNPR---------NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPK- 99
                  A+             +VF     + +  +DP   +++    + V   +S PK 
Sbjct: 63  RQALLRRAIRYNREEDIDVTAQSVFFGLAALAQYLEDP---EEV----YFV---KS-PKS 111

Query: 100 ---------IQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFN-- 148
                     QV        F  E++   ++  +K+ AEA L  ++  AVI  P  F   
Sbjct: 112 FLGASGLKPQQVAL------F--EDLVCAMMLHIKQQAEAQLQAAITQAVIGRPVNFQGL 163

Query: 149 ---DAQRQAT---KDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 202
              +A RQA    + A   AG   +    EP AA L +  +  L  E+ VL+ D+GGGT 
Sbjct: 164 GGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDF--EATLTEEKRVLVVDIGGGTT 221

Query: 203 DVSIL 207
           D S+L
Sbjct: 222 DCSML 226

Length = 450

>gnl|CDD|227157 COG4820, EutJ, Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 120 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALA 179
           ++ ++K+T E  LG     A   +P        + + +    AGL V+ +++EPTAAA  
Sbjct: 77  IVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADV 136

Query: 180 YGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS-H 238
             LD       +  + D+GGGT  +SI+      ++      G TH+      N  +S  
Sbjct: 137 LQLD-------DGGVVDIGGGTTGISIVK-KGKVIYSADEPTGGTHMTLVLAGNYGISLE 188

Query: 239 LAEEFKRKCRSASDV 253
            AE++KR  +   ++
Sbjct: 189 EAEQYKRGHKKGEEI 203

Length = 277

>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 71/251 (28%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERL--IGDAAKNQVAMNP 60
           IGIDLGT      V+ +GK  I+ N+      PS VA  T T ++  +G+          
Sbjct: 11  IGIDLGTAN--TLVYVKGK-GIVLNE------PSVVAIDTKTGKVLAVGE---------- 51

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
                +AK ++GR   + +  + +K     V+ D                F   E +  +
Sbjct: 52  -----EAKEMLGRTPGNIEAIRPLKD---GVIAD----------------F---EATEAM 84

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L    + A           VI VP+   + +R+A ++A   AG   + ++ EP AAA+  
Sbjct: 85  LRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAAEHAGAREVYLIEEPMAAAIGA 144

Query: 181 GLDKNLKGERNV------LIFDLGGGTFDVSILSIDEGALFE-VRSTAGDTHLGGEDFDN 233
           GL         V      ++ D+GGGT +V+++S+      E +R       + G++ D 
Sbjct: 145 GLP--------VTEPVGNMVVDIGGGTTEVAVISLGGIVYSESIR-------VAGDEMDE 189

Query: 234 RLVSHLAEEFK 244
            +V ++  ++ 
Sbjct: 190 AIVQYVRRKYN 200

Length = 335

>gnl|CDD|213718 TIGR02529, EutJ, ethanolamine utilization protein EutJ family protein

 Score = 48.2 bits (115), Expect = 4e-06
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%)

Query: 117 SSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 176
           +  ++ ++K+T E  LG  +  A   +P    +   +   +    AG+ V+ +++EPTAA
Sbjct: 42  AVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAA 101

Query: 177 ALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236
           A    +        N  + D+GGGT  +SIL      ++      G TH+         +
Sbjct: 102 AAVLQIK-------NGAVVDVGGGTTGISILK-KGKVIYSADEPTGGTHMSLVLAGAYGI 153

Query: 237 S-HLAEEFKRKCRSASDV 253
           S   AEE+KR  +   ++
Sbjct: 154 SFEEAEEYKRGHKDEEEI 171

Length = 239

>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional

 Score = 48.4 bits (115), Expect = 5e-06
 Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 59/245 (24%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTER---LIGDAAKNQVAMNP 60
           IGIDLGT    V    +G   II N+      PS VA     +    IG  AKN +   P
Sbjct: 7   IGIDLGTANILVYSKNKG---IILNE------PSVVAVDTETKAVLAIGTEAKNMIGKTP 57

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
              V        R   D  I                               A  ++++ +
Sbjct: 58  GKIV------AVRPMKDGVI-------------------------------ADYDMTTDL 80

Query: 121 LTKMKETAEAYLGHSVR--DAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
           L ++ + A   +G + R  + V+  P+     +R+A  DA    G   + ++ EP AAA+
Sbjct: 81  LKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISDAVKNCGAKNVHLIEEPVAAAI 140

Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
             G D  +      ++ D+GGGT +V+I+S   G +    S      +GG+  D  +VS 
Sbjct: 141 --GADLPVDEPVANVVVDIGGGTTEVAIISF--GGVVSCHS----IRIGGDQLDEDIVSF 192

Query: 239 LAEEF 243
           + +++
Sbjct: 193 VRKKY 197

Length = 335

>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional

 Score = 48.0 bits (115), Expect = 6e-06
 Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 81/256 (31%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERLI--GDAAK------- 53
           IGIDLGT  + V V+ +GK  I+ N+      PS VA   +T +++  G+ A+       
Sbjct: 6   IGIDLGT--ANVLVYVKGK-GIVLNE------PSVVAIDKNTNKVLAVGEEARRMVGRTP 56

Query: 54  -NQVAMNP-RNTV---FDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGER 108
            N VA+ P R+ V   +D    + + F    I +      F      SKP+I        
Sbjct: 57  GNIVAIRPLRDGVIADYDVTEKMLKYF----INKACGKRFF------SKPRI-------- 98

Query: 109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 168
                                          +I +P      +++A ++A   AG   + 
Sbjct: 99  -------------------------------MICIPTGITSVEKRAVREAAEQAGAKKVY 127

Query: 169 IVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGG 228
           ++ EP AAA+  GLD  +      ++ D+GGGT D+++LS+  G +    S      + G
Sbjct: 128 LIEEPLAAAIGAGLD--ISQPSGNMVVDIGGGTTDIAVLSL--GGIVTSSS----IKVAG 179

Query: 229 EDFDNRLVSHLAEEFK 244
           + FD  ++ ++ +++K
Sbjct: 180 DKFDEAIIRYIRKKYK 195

Length = 336

>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 19/35 (54%), Positives = 27/35 (77%), Gaps = 1/35 (2%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 298
           +Q+++Q  F GK  + S+NPDEAVA GAA+Q +IL
Sbjct: 340 IQNVVQEIF-GKKPSKSVNPDEAVALGAAIQGSIL 373

Ssq1p (also called Stress-seventy subfamily Q protein 1, Ssc2p, Ssh1p, mtHSP70 homolog) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). S. cerevisiae Ssq1p is a mitochondrial chaperone that is involved in iron-sulfur (Fe/S) center biogenesis. Ssq1p plays a role in the maturation of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Length = 373

>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 296
           V+ LL+  F GK    SI+PDEAVA GAA+ AA
Sbjct: 338 VRELLEELF-GKKPLRSIDPDEAVALGAAIYAA 369

HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs. Length = 369

>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins

 Score = 44.8 bits (107), Expect = 8e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299
           V+ L+   F GK L+ ++N DEAVA G A+Q A+LS
Sbjct: 347 VKELIAKVF-GKELSTTLNADEAVARGCALQCAMLS 381

This subgroup includes the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), Saccharomyces cerevisiae Sse1p and Sse2p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 381

>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins

 Score = 43.6 bits (104), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 263 VVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 296
           VV+ L+   F G+   + +NPDE VA GAA+QA 
Sbjct: 307 VVRKLVSRLF-GRFPLVHLNPDEVVALGAAIQAG 339

This subfamily includes Escherichia coli HscC (also called heat shock cognate protein C, Hsc62, or YbeW) and the the putative DnaK-like protein Escherichia coli ECs0689. It belongs to the heat shock protein 70 (Hsp70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, Hsp70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Two genes in the vicinity of the HscC gene code for potential cochaperones: J-domain containing proteins, DjlB/YbeS and DjlC/YbeV. HscC and its co-chaperone partners may play a role in the SOS DNA damage response. HscC does not appear to require a NEF. Length = 339

>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]

 Score = 44.1 bits (105), Expect = 1e-04
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 66/250 (26%)

Query: 4   IGIDLGTTYSCVAVFQQGKV----EIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 59
           IGIDLGT  + V V  +G V     ++A +   +T        + ++++G    N VA+ 
Sbjct: 9   IGIDLGTANTLVYVKGKGIVLNEPSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNIVAIR 68

Query: 60  P-RNTV---FDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEE 115
           P ++ V   F+   L+ + F    I++          N  S PK ++             
Sbjct: 69  PMKDGVIADFEVTELMLKYF----IKK-------VHKNGSSFPKPRI------------- 104

Query: 116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 175
                                   VI VP+   D +R+A K+A   AG   + ++ EP A
Sbjct: 105 ------------------------VICVPSGITDVERRAIKEAAESAGAREVYLIEEPMA 140

Query: 176 AALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT-HLGGEDFDNR 234
           AA   G    +      ++ D+GGGT +V+++S     L  +   +  +  +GG+  D  
Sbjct: 141 AA--IGAGLPIMEPTGSMVVDIGGGTTEVAVIS-----LGGI--VSSSSVRVGGDKMDEA 191

Query: 235 LVSHLAEEFK 244
           ++ ++ +++ 
Sbjct: 192 IIVYVRKKYN 201

Length = 342

>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD---QSSAIQ 307
           ++ ++  FF GK  N S++P+ AV  G A+QA I+ G    Q SAI+
Sbjct: 368 IRQVIGRFF-GKDPNTSVDPELAVVTGVAIQAGIIGGSWPLQVSAIE 413

Human HSPA13 (also called 70-kDa heat shock protein 13, STCH, "stress 70 protein chaperone, microsome-associated, 60kD", "stress 70 protein chaperone, microsome-associated, 60kDa"; the gene encoding HSPA13 maps to 21q11.1) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). STCH contains an NBD but lacks an SBD. STCH may function to regulate cell proliferation and survival, and modulate the TRAIL-mediated cell death pathway. The HSPA13 gene is a candidate stomach cancer susceptibility gene; a mutation in the NBD coding region of HSPA13 has been identified in stomach cancer cells. The NBD of HSPA13 interacts with the ubiquitin-like proteins Chap1 and Chap2, implicating HSPA13 in regulating cell cycle and cell death events. HSPA13 is induced by the Ca2+ ionophore A23187. Length = 417

>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins

 Score = 42.4 bits (100), Expect = 5e-04
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 296
           +Q L+++ F    +  SI+PDE +A GAA QA 
Sbjct: 343 LQQLIKDLFPSVEVLNSISPDEVIAIGAAKQAG 375

Human HSPA14 (also known as 70-kDa heat shock protein 14, HSP70L1, HSP70-4; the gene encoding HSPA14 maps to 10p13), is ribosome-associated and belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). HSPA14 interacts with the J-protein MPP11 to form the mammalian ribosome-associated complex (mRAC). HSPA14 participates in a pathway along with Nijmegen breakage syndrome 1 (NBS1, also known as p85 or nibrin), heat shock transcription factor 4b (HSF4b), and HSPA4 (belonging to a different subfamily), that induces tumor migration, invasion, and transformation. HSPA14 is a potent T helper cell (Th1) polarizing adjuvant that contributes to antitumor immune responses. Length = 375

>gnl|CDD|223918 COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning]

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGAL 214
           AGL V  IV EP A+ALA  L ++ K E  V + D+GGGT D++I     GAL
Sbjct: 177 AGLKVDNIVLEPLASALAV-LTEDEK-ELGVALIDIGGGTTDIAIYK--NGAL 225

Length = 418

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	549
KOG0100|consensus	663		100.0
PTZ00009	653	heat shock 70 kDa protein; Provisional	100.0
KOG0101|consensus	620		100.0
PRK13411	653	molecular chaperone DnaK; Provisional	100.0
PTZ00186	657	heat shock 70 kDa precursor protein; Provisional	100.0
PRK13410	668	molecular chaperone DnaK; Provisional	100.0
PLN03184	673	chloroplast Hsp70; Provisional	100.0
PTZ00400	663	DnaK-type molecular chaperone; Provisional	100.0
PRK00290	627	dnaK molecular chaperone DnaK; Provisional	100.0
CHL00094	621	dnaK heat shock protein 70	100.0
TIGR02350	595	prok_dnaK chaperone protein DnaK. Members of this	100.0
PRK05183	616	hscA chaperone protein HscA; Provisional	100.0
TIGR01991	599	HscA Fe-S protein assembly chaperone HscA. The Hea	100.0
PRK01433	595	hscA chaperone protein HscA; Provisional	100.0
KOG0102|consensus	640		100.0
PF00012	602	HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho	100.0
COG0443	579	DnaK Molecular chaperone [Posttranslational modifi	100.0
KOG0103|consensus	727		100.0
KOG0104|consensus	902		100.0
PRK11678	450	putative chaperone; Provisional	100.0
PRK13928	336	rod shape-determining protein Mbl; Provisional	99.97
PRK13929	335	rod-share determining protein MreBH; Provisional	99.97
TIGR00904	333	mreB cell shape determining protein, MreB/Mrl fami	99.96
PRK13927	334	rod shape-determining protein MreB; Provisional	99.95
PRK13930	335	rod shape-determining protein MreB; Provisional	99.94
PF06723	326	MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba	99.93
COG1077	342	MreB Actin-like ATPase involved in cell morphogene	99.89
TIGR02529	239	EutJ ethanolamine utilization protein EutJ family	99.87
PRK15080	267	ethanolamine utilization protein EutJ; Provisional	99.84
PRK09472	420	ftsA cell division protein FtsA; Reviewed	99.46
TIGR01174	371	ftsA cell division protein FtsA. This bacterial ce	99.26
COG4820	277	EutJ Ethanolamine utilization protein, possible ch	99.24
smart00268	373	ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki	99.14
cd00012	371	ACTIN Actin; An ubiquitous protein involved in the	99.14
PRK13917	344	plasmid segregation protein ParM; Provisional	99.09
COG0849	418	ftsA Cell division ATPase FtsA [Cell division and	99.07
TIGR03739	320	PRTRC_D PRTRC system protein D. A novel genetic sy	98.91
PTZ00280	414	Actin-related protein 3; Provisional	98.78
PF06406	318	StbA: StbA protein; InterPro: IPR009440 This entry	98.63
PF00022	393	Actin: Actin; InterPro: IPR004000 Actin [, ] is a	98.58
PTZ00004	378	actin-2; Provisional	98.53
PTZ00281	376	actin; Provisional	98.48
PTZ00452	375	actin; Provisional	98.47
PTZ00466	380	actin-like protein; Provisional	98.39
KOG0679|consensus	426		98.3
PRK10719	475	eutA reactivating factor for ethanolamine ammonia	98.23
TIGR01175	348	pilM type IV pilus assembly protein PilM. This pro	98.17
PF11104	340	PilM_2: Type IV pilus assembly protein PilM;; PDB:	97.7
COG5277	444	Actin and related proteins [Cytoskeleton]	97.42
TIGR00241	248	CoA_E_activ CoA-substrate-specific enzyme activase	97.31
PF06277	473	EutA: Ethanolamine utilisation protein EutA; Inter	97.13
KOG0797|consensus	618		97.06
TIGR03192	293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	96.75
PF07520	1002	SrfB: Virulence factor SrfB; InterPro: IPR009216 T	96.74
TIGR03286	404	methan_mark_15 putative methanogenesis marker prot	96.67
COG1924	396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	96.47
COG0248	492	GppA Exopolyphosphatase [Nucleotide transport and	96.43
PRK10854	513	exopolyphosphatase; Provisional	96.03
KOG0676|consensus	372		95.92
PRK11031	496	guanosine pentaphosphate phosphohydrolase; Provisi	95.65
PF08841	332	DDR: Diol dehydratase reactivase ATPase-like domai	95.52
TIGR03706	300	exo_poly_only exopolyphosphatase. It appears that	94.87
COG4972	354	PilM Tfp pilus assembly protein, ATPase PilM [Cell	94.09
TIGR02261	262	benz_CoA_red_D benzoyl-CoA reductase, bcr type, su	93.79
COG4819	473	EutA Ethanolamine utilization protein, possible ch	93.45
smart00842	187	FtsA Cell division protein FtsA. FtsA is essential	93.41
COG4457	1014	SrfB Uncharacterized protein conserved in bacteria	92.19
COG1548	330	Predicted transcriptional regulator/sugar kinase [	92.18
PF02541	285	Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I	91.91
KOG0681|consensus	645		89.86
PF03652	135	UPF0081: Uncharacterised protein family (UPF0081);	87.43
PRK09557	301	fructokinase; Reviewed	87.07
PF01968	290	Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr	86.61
smart00732	99	YqgFc Likely ribonuclease with RNase H fold. YqgF	86.55
COG0145	674	HyuA N-methylhydantoinase A/acetone carboxylase, b	83.57
PF14450	120	FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B	81.07
COG5026	466	Hexokinase [Carbohydrate transport and metabolism]	80.21

>KOG0100|consensus

Probab=100.00  E-value=8.1e-125  Score=892.89  Aligned_cols=527  Identities=63%  Similarity=1.018  Sum_probs=510.5

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      +|||||||||+|||+++++|+++||.|++|+|.+||+|+|.+++|++|++|++++..||+|++++.|||+|+.++++.+|
T Consensus        37 tvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq  116 (663)
T KOG0100|consen   37 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQ  116 (663)
T ss_pred             eEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChhhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCeEEeecCCCceEEEEEc-CceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVNDRSKPKIQVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                      .+++.|||++++.++.|.+.|... |+.+.++|+++++|+|.++++.|+.|+|.++.++|+||||||++.||+++++|..
T Consensus       117 ~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGt  196 (663)
T KOG0100|consen  117 KDIKFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGT  196 (663)
T ss_pred             hhhhcCceEEEcCCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccce
Confidence            999999999999999999999987 6689999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +|||+++++|+||+|||++||+++. ..+.++||||+||||||||++.+++| .|+|+++.||.+|||.+||+++++|+.
T Consensus       197 IAgLnV~RIiNePTaAAIAYGLDKk-~gEknilVfDLGGGTFDVSlLtIdnG-VFeVlaTnGDThLGGEDFD~rvm~~fi  274 (663)
T KOG0100|consen  197 IAGLNVVRIINEPTAAAIAYGLDKK-DGEKNILVFDLGGGTFDVSLLTIDNG-VFEVLATNGDTHLGGEDFDQRVMEYFI  274 (663)
T ss_pred             eccceEEEeecCccHHHHHhccccc-CCcceEEEEEcCCceEEEEEEEEcCc-eEEEEecCCCcccCccchHHHHHHHHH
Confidence            9999999999999999999999976 46789999999999999999999999 999999999999999999999999999


Q ss_pred             HHHHhccc--------------cccccCC---------------------------------------------------
Q psy3431         241 EEFKRKCR--------------SASDVGD---------------------------------------------------  255 (549)
Q Consensus       241 ~~~~~~~~--------------~~~e~~K---------------------------------------------------  255 (549)
                      +.|+++++              ++||++|                                                   
T Consensus       275 klykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~  354 (663)
T KOG0100|consen  275 KLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLE  354 (663)
T ss_pred             HHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHh
Confidence            99999887              6788877                                                   


Q ss_pred             ----CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccce
Q psy3431         256 ----HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLG  320 (549)
Q Consensus       256 ----~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~ig  320 (549)
                          .+++|++|           ||++|+++|+|+++.+.+|||||||+|||.+|..||+  .....++++.|++|+++|
T Consensus       355 Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsG--ee~t~divLLDv~pLtlG  432 (663)
T KOG0100|consen  355 DSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSG--EEDTGDIVLLDVNPLTLG  432 (663)
T ss_pred             hcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhccccc--ccCcCcEEEEeeccccce
Confidence                45667766           9999999999999999999999999999999999999  567889999999999999


Q ss_pred             EEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCC
Q psy3431         321 IETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA  400 (549)
Q Consensus       321 i~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~  400 (549)
                      |++.+|.|..|||||+.||.+++..|++..|+|+.+.|.+|+|++++.++|+.||+|.+.||||+|+|.|+|+|+|++|.
T Consensus       433 IETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDa  512 (663)
T KOG0100|consen  433 IETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDA  512 (663)
T ss_pred             eeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc---Cc
Q psy3431         401 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG---NK  477 (549)
Q Consensus       401 ~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~---~~  477 (549)
                      ||+|+|++.++.||++.+++|+|+..+|++|+|++|+.+.++|.++|+..+++.++||.||+|.|.+++.+.+.+   ..
T Consensus       513 ngiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~K  592 (663)
T KOG0100|consen  513 NGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGK  592 (663)
T ss_pred             CceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998765   78


Q ss_pred             cChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3431         478 LTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG  532 (549)
Q Consensus       478 ~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~  532 (549)
                      +++++++.+...+++..+||++|++|+.++|++++++|+.+++||.++++..+|+
T Consensus       593 l~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~  647 (663)
T KOG0100|consen  593 LSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGG  647 (663)
T ss_pred             CChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            9999999999999999999999999999999999999999999999999987764

>PTZ00009 heat shock 70 kDa protein; Provisional

Probab=100.00  E-value=5e-101  Score=835.12  Aligned_cols=548  Identities=70%  Similarity=1.082  Sum_probs=508.1

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      +++||||||||||+||++++|.+++|+|..|+|.+||+|+|.++++++|..|+.++.++|.++++++||+||+.++++.+
T Consensus         4 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~   83 (653)
T PTZ00009          4 GPAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDSVV   83 (653)
T ss_pred             ccEEEEEeCcccEEEEEEeCCceEEEECCCCCccCCcEEEECCCCEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCchhH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.|||.+.. .++.+.+.+.+.++...++|++|++++|++|++.|+.+++.++.++|||||+||++.||+++++||
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa  163 (653)
T PTZ00009         84 QSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAG  163 (653)
T ss_pred             hhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHHHHHHhCCCcceeEEEeCCCCCHHHHHHHHHHH
Confidence            9999999999875 677888888888877899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|++.+....+.++||||+||||||+||+++.++ .++++++.||.++||.+||.+|++|+
T Consensus       164 ~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~-~~~v~a~~gd~~lGG~d~D~~l~~~~  242 (653)
T PTZ00009        164 TIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFC  242 (653)
T ss_pred             HHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeCC-eEEEEEecCCCCCChHHHHHHHHHHH
Confidence            99999999999999999999998765445788999999999999999999988 99999999999999999999999999


Q ss_pred             HHHHHhccc---------------cccccCC-------------------------------------------------
Q psy3431         240 AEEFKRKCR---------------SASDVGD-------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~---------------~~~e~~K-------------------------------------------------  255 (549)
                      .++|+.++.               .+||++|                                                 
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~~~~~i~~~  322 (653)
T PTZ00009        243 VQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEKV  322 (653)
T ss_pred             HHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCCceEEEEECHHHHHHHHHHHHHHHHHHHHHH
Confidence            999976542               5688888                                                 


Q ss_pred             ------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEecccc
Q psy3431         256 ------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLS  318 (549)
Q Consensus       256 ------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~  318 (549)
                            ++.+|+.|           ||++|+++|++..+..++|||+|||+|||++|+++++...++++++.+.|++|++
T Consensus       323 L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~~dv~p~s  402 (653)
T PTZ00009        323 LKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLS  402 (653)
T ss_pred             HHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccceEEEeecccc
Confidence                  22233333           9999999998778889999999999999999999998555778899999999999


Q ss_pred             ceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEe
Q psy3431         319 LGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDL  398 (549)
Q Consensus       319 igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~  398 (549)
                      ||++..++.+.+|||+|++||++++.+|++..++|+.+.|+||||++..+.+|..||+|.|.++|+.++|.++|+|+|++
T Consensus       403 lgi~~~~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~i  482 (653)
T PTZ00009        403 LGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDI  482 (653)
T ss_pred             cCccccCCceEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCCceEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998899999999


Q ss_pred             CCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhc-c-C
Q psy3431         399 DANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDA-G-N  476 (549)
Q Consensus       399 d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~-~-~  476 (549)
                      |.||+|+|++.+..|++...+++.....+|++++++++++.+.++..+|+..+++.+++|+||+|||++|++|++. . .
T Consensus       483 d~~Gil~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L~~~~~~~  562 (653)
T PTZ00009        483 DANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTLQDEKVKG  562 (653)
T ss_pred             CCCCeEEEEEecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhc
Confidence            9999999999999999999998887667799999999999999999999999999999999999999999999753 3 7


Q ss_pred             ccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC------------------
Q psy3431         477 KLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDM------------------  538 (549)
Q Consensus       477 ~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~~~~------------------  538 (549)
                      ++++++++.+.+.++++++||+++++++.++|++|+++|++.++|+..|++.++|++|.+||                  
T Consensus       563 ~~t~ee~~~l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~~~~pi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (653)
T PTZ00009        563 KLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQAAGGGMPGGMPGGMPGGMPGGAGPAGAG  642 (653)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            89999999999999999999998888999999999999999999999999888777664444                  


Q ss_pred             CCCCCCCCCCC
Q psy3431         539 PRGGPTVEEVD  549 (549)
Q Consensus       539 ~~~~~~~~~~~  549 (549)
                      +++||+|||||
T Consensus       643 ~~~~~~~~~~~  653 (653)
T PTZ00009        643 ASSGPTVEEVD  653 (653)
T ss_pred             CCCCCccccCC
Confidence            13599999998

>KOG0101|consensus

Probab=100.00  E-value=5.1e-96  Score=751.99  Aligned_cols=528  Identities=71%  Similarity=1.098  Sum_probs=506.9

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      |.++|||||||++|++++.+|.++++.|++|+|.+||+|+|.++++++|..|..+..++|.++++++||++|+.++++.+
T Consensus         7 ~~aiGIdlGtT~s~v~v~~~~~v~iian~~g~rttPs~vaf~~~e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~~v   86 (620)
T KOG0101|consen    7 SVAIGIDLGTTYSCVGVYQSGKVEIIANDQGNRTTPSVVAFTDTERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDPEV   86 (620)
T ss_pred             cceeeEeccCccceeeeEcCCcceeeeccccCccccceeeecccccchhhhhhhhhhcCCcceeeehhhhcCccccchhh
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +..+++|||.+.. .++.+.+.+.+.++.+.++|+++.++.|.++++.|+.++|..+.++|+|||+||++.||+++.+|+
T Consensus        87 ~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A~  166 (620)
T KOG0101|consen   87 QSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDAA  166 (620)
T ss_pred             HhHhhcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHHH
Confidence            9999999999995 566899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      .+|||+++++|+||+|||++|++.+......+++|+|+||||||+|++.+.+| .+.++++.+|.++||++||+.|++|+
T Consensus       167 ~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~gG-~~~vkat~gd~~lGGedf~~~l~~h~  245 (620)
T KOG0101|consen  167 LIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEGG-IFEVKATAGDTHLGGEDFDNKLVNHF  245 (620)
T ss_pred             HhcCCceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEeccc-hhhhhhhcccccccchhhhHHHHHHH
Confidence            99999999999999999999998887667889999999999999999999999 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      ..+|+++++              .+||++|                                                  
T Consensus       246 ~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~v~~~L  325 (620)
T KOG0101|consen  246 AAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKAL  325 (620)
T ss_pred             HHHHHHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhccccccceeehhhhhhhhhHHHHHHHHHHHHHH
Confidence            999999887              6788888                                                  


Q ss_pred             -----CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccc
Q psy3431         256 -----HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSL  319 (549)
Q Consensus       256 -----~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~i  319 (549)
                           .+.+|++|           +|.+++++|+++.+..++||||+||+|||++||.+++.......++.+.|+.|.++
T Consensus       326 ~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~~pl~~  405 (620)
T KOG0101|consen  326 KDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDVAPLSL  405 (620)
T ss_pred             HhhccCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceeeeecccccc
Confidence                 34445554           99999999999999999999999999999999999997777778999999999999


Q ss_pred             eEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeC
Q psy3431         320 GIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD  399 (549)
Q Consensus       320 gi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d  399 (549)
                      ||+..++.|.++|++|+.+|++++.+|+++.|||+.+.|.||+|++..+++|..+|.|.|.||||+|+|+|.|+++|.+|
T Consensus       406 gve~a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~IevtfdiD  485 (620)
T KOG0101|consen  406 GVETAGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID  485 (620)
T ss_pred             cccccCCcceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcceeEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccC
Q psy3431         400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLT  479 (549)
Q Consensus       400 ~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~  479 (549)
                      .||+|.|++.++.||+...++|++....||+++|++|....+++..+|...+++.+++|.||+|+|.++..+++....++
T Consensus       486 ~ngiL~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~~~~~~~i~  565 (620)
T KOG0101|consen  486 ANGILNVTAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATVEDEKGKIN  565 (620)
T ss_pred             CCcEEEEeeccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhhhhhccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987657899


Q ss_pred             hhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3431         480 ESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGG  529 (549)
Q Consensus       480 ~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~  529 (549)
                      ++++.++.++++++..||+.+..+.+++|++|.++|+..+.||+.+++.+
T Consensus       566 ~~~~~~~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~~~~p~~~~~~~~  615 (620)
T KOG0101|consen  566 EEDKQKILDKCNEVINWLDKNQLAEKEEFEHKQKELELVCNPIISKLYQG  615 (620)
T ss_pred             hhhhhhHHHHHHHHHHHhhhcccccccHHHHHHHHHHhhccHHHHhhhcc
Confidence            99999999999999999999988889999999999999999999998775

>PRK13411 molecular chaperone DnaK; Provisional

Probab=100.00  E-value=3.3e-93  Score=772.95  Aligned_cols=517  Identities=50%  Similarity=0.834  Sum_probs=472.3

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .+||||||||||+||++++|.+.+|+|..|+|.+||+|+|.++ ++++|..|+.++.++|.++++++|||||+.++++. 
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~-   81 (653)
T PRK13411          3 KVIGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDTE-   81 (653)
T ss_pred             cEEEEEeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeCCCCEEEcHHHHHhhhhCcccchHHHHHHhCCCccchh-
Confidence            3899999999999999999999999999999999999999764 89999999999999999999999999999998864 


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                       ...+++||.++. .++...+.  +.+  ..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||
T Consensus        82 -~~~~~~~~~~v~~~~~~~~~~--i~~--~~~~peei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  156 (653)
T PRK13411         82 -EERSRVPYTCVKGRDDTVNVQ--IRG--RNYTPQEISAMILQKLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAG  156 (653)
T ss_pred             -HHhhcCCceEEecCCCceEEE--ECC--EEECHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCcHHHHHHHHHH
Confidence             345788999875 44444443  455  689999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|++.+. ..+.++||||+||||||+||+++.++ .++|+++.||.++||.+||.+|++|+
T Consensus       157 ~~AGl~v~~li~EPtAAAl~y~~~~~-~~~~~vlV~DlGgGT~dvsi~~~~~~-~~~V~at~gd~~LGG~dfD~~l~~~l  234 (653)
T PRK13411        157 TIAGLEVLRIINEPTAAALAYGLDKQ-DQEQLILVFDLGGGTFDVSILQLGDG-VFEVKATAGNNHLGGDDFDNCIVDWL  234 (653)
T ss_pred             HHcCCCeEEEecchHHHHHHhccccc-CCCCEEEEEEcCCCeEEEEEEEEeCC-EEEEEEEecCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999998754 34688999999999999999999988 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|+.+++              .+||++|                                                  
T Consensus       235 ~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i  314 (653)
T PRK13411        235 VENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPM  314 (653)
T ss_pred             HHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence            999976543              5677777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               ++++|+.|           ||+.|+++|++..+..++|||+|||+|||++|+++++    .++++.+.|++
T Consensus       315 ~~~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~----~~~~~~~~dv~  390 (653)
T PRK13411        315 QQALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGG----EVKDLLLLDVT  390 (653)
T ss_pred             HHHHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcC----Cccceeeeecc
Confidence                     11112222           9999999998788889999999999999999999987    36789999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |++||++..++.+.+|||+|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+++.|.++|+|+
T Consensus       391 p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~  470 (653)
T PRK13411        391 PLSLGIETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVS  470 (653)
T ss_pred             cceeeEEecCCceEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG  475 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~  475 (549)
                      |.+|.||+|+|++.+..+|+...+.+.+. .+|++++++++++++.++..+|+.++++.++||+||+|+|.+|+.|.+..
T Consensus       471 f~id~~Gil~v~a~d~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~~~~  549 (653)
T PRK13411        471 FEIDVNGILKVSAQDQGTGREQSIRITNT-GGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLLYSYESTLKENG  549 (653)
T ss_pred             EEECCCCeEEEEEeeccCCceEeeEEecc-ccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999988888765 67999999999999999999999999999999999999999999997644


Q ss_pred             CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3431         476 NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG  532 (549)
Q Consensus       476 ~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~  532 (549)
                      .++++++|+.+.+.++++++||+++ +++.++|++++++|++.+.++..+++++.|+
T Consensus       550 ~~~~~~er~~i~~~l~~~~~wL~~~-~~~~~~~~~~~~el~~~~~~i~~~~y~~~~~  605 (653)
T PRK13411        550 ELISEELKQRAEQKVEQLEAALTDP-NISLEELKQQLEEFQQALLAIGAEVYQQGGS  605 (653)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            7899999999999999999999984 4689999999999999999999998875543

>PTZ00186 heat shock 70 kDa precursor protein; Provisional

Probab=100.00  E-value=8.3e-93  Score=763.58  Aligned_cols=515  Identities=50%  Similarity=0.792  Sum_probs=473.1

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      .+||||||||||+||++++|.+++++|..|.+.+||+|+|.++++++|..|+.++.++|.++++++||+||+.++++.++
T Consensus        28 ~viGIDLGTTnS~vA~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~v~  107 (657)
T PTZ00186         28 DVIGVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGSEKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHIQ  107 (657)
T ss_pred             eEEEEEeCcCeEEEEEEeCCceEEeecCCCCcccceEEEECCCCEEEcHHHHHhhhhCchhHHHHHHHHhccccccHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        82 ~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                      ...+.+||.++. .++...+.  ..+ ...++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||+
T Consensus       108 ~~~~~~p~~vv~~~~~~~~i~--~~~-~~~~speeisa~iL~~Lk~~Ae~~lg~~v~~aVITVPayF~~~qR~at~~Aa~  184 (657)
T PTZ00186        108 KDIKNVPYKIVRAGNGDAWVQ--DGN-GKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGT  184 (657)
T ss_pred             HhhccCcEEEEEcCCCceEEE--eCC-CeEEcHHHHHHHHHHHHHHHHHHHhCCccceEEEEECCCCChHHHHHHHHHHH
Confidence            999999999986 34443332  222 37899999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +|||++++||+||+|||++|++...  .+.++||||+||||||+||+++.++ .++++++.||.++||.+||.+|++|+.
T Consensus       185 ~AGl~v~rlInEPtAAAlayg~~~~--~~~~vlV~DlGGGT~DvSil~~~~g-~~~V~at~Gd~~LGG~DfD~~l~~~~~  261 (657)
T PTZ00186        185 IAGLNVIRVVNEPTAAALAYGMDKT--KDSLIAVYDLGGGTFDISVLEIAGG-VFEVKATNGDTHLGGEDFDLALSDYIL  261 (657)
T ss_pred             HcCCCeEEEEcChHHHHHHHhccCC--CCCEEEEEECCCCeEEEEEEEEeCC-EEEEEEecCCCCCCchhHHHHHHHHHH
Confidence            9999999999999999999998754  5689999999999999999999988 999999999999999999999999999


Q ss_pred             HHHHhccc--------------cccccCC---------------------------------------------------
Q psy3431         241 EEFKRKCR--------------SASDVGD---------------------------------------------------  255 (549)
Q Consensus       241 ~~~~~~~~--------------~~~e~~K---------------------------------------------------  255 (549)
                      ++|+.+++              .+||++|                                                   
T Consensus       262 ~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~  341 (657)
T PTZ00186        262 EEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCK  341 (657)
T ss_pred             HHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHH
Confidence            99987654              5688877                                                   


Q ss_pred             --------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEecc
Q psy3431         256 --------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTP  316 (549)
Q Consensus       256 --------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~  316 (549)
                              ++.+|+.|           |+++|+++|+ ..+..++|||||||+|||++|+++++    .++++.+.|++|
T Consensus       342 ~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~fg-~~~~~~~nPdeaVA~GAAi~a~~l~~----~~~~~~l~Dv~p  416 (657)
T PTZ00186        342 QCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFFQ-KDPFRGVNPDEAVALGAATLGGVLRG----DVKGLVLLDVTP  416 (657)
T ss_pred             HHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHhC-CCccccCCCchHHHHhHHHHHHHhcc----ccCceEEEeecc
Confidence                    12233333           9999999995 56678999999999999999999987    457889999999


Q ss_pred             ccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEE
Q psy3431         317 LSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTF  396 (549)
Q Consensus       317 ~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~  396 (549)
                      ++||+++.+|.+.+|||||++||++++..|++..|||+.+.|+||||++..+.+|..||+|.|.++|+.|+|.++|+|+|
T Consensus       417 ~slgie~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf  496 (657)
T PTZ00186        417 LSLGIETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTF  496 (657)
T ss_pred             ccccceecCCEEEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccC
Q psy3431         397 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGN  476 (549)
Q Consensus       397 ~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~  476 (549)
                      ++|.||+|+|++.+..||++..++|... ..|+++++++++++.+++..+|+..+++.+++|++|++++.++..+.+. .
T Consensus       497 ~iD~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  574 (657)
T PTZ00186        497 DIDANGICHVTAKDKATGKTQNITITAN-GGLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQLTTAERQLGEW-K  574 (657)
T ss_pred             EEcCCCEEEEEEEEccCCcEEEEEeccC-ccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh-c
Confidence            9999999999999999999999999865 5699999999999999999999999999999999999999999999643 4


Q ss_pred             ccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         477 KLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       477 ~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      .+++++++.+.+.+++.++||.. .+.+.+++++++++|++.+.++..+++...
T Consensus       575 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  627 (657)
T PTZ00186        575 YVSDAEKENVKTLVAELRKAMEN-PNVAKDDLAAATDKLQKAVMECGRTEYQQA  627 (657)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            68899999999999999999984 345779999999999999999998876544

>PRK13410 molecular chaperone DnaK; Provisional

Probab=100.00  E-value=4.6e-93  Score=769.27  Aligned_cols=514  Identities=47%  Similarity=0.771  Sum_probs=469.4

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .|||||||||||+||++++|.+.+|+|..|+|.+||+|+|.+ +++++|..|+.++.++|.++++++||+||+++.+  +
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~--~   80 (668)
T PRK13410          3 RIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE--L   80 (668)
T ss_pred             cEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCCCCEEECHHHHHhhHhCccceehHHhhhhCCCchh--h
Confidence            389999999999999999999999999999999999999975 5899999999999999999999999999999865  4


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +.....+||.+.. .++...+.+...+  +.++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||
T Consensus        81 ~~~~~~~~~~v~~~~~g~~~i~~~~~~--~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  158 (668)
T PRK13410         81 DPESKRVPYTIRRNEQGNVRIKCPRLE--REFAPEELSAMILRKLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAG  158 (668)
T ss_pred             HHhhccCCeEEEECCCCcEEEEEecCC--eEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence            5566789999875 4555555544333  789999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|++.+.  .+.++||||+||||||+||+++.++ .++|+++.||.++||.+||.+|++||
T Consensus       159 ~~AGl~v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~Dvsv~~~~~g-~~~V~at~gd~~lGG~dfD~~l~~~l  235 (668)
T PRK13410        159 RIAGLEVERILNEPTAAALAYGLDRS--SSQTVLVFDLGGGTFDVSLLEVGNG-VFEVKATSGDTQLGGNDFDKRIVDWL  235 (668)
T ss_pred             HHcCCCeEEEecchHHHHHHhccccC--CCCEEEEEECCCCeEEEEEEEEcCC-eEEEEEeecCCCCChhHHHHHHHHHH
Confidence            99999999999999999999998754  5789999999999999999999988 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|..+++              .+||++|                                                  
T Consensus       236 ~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~i  315 (668)
T PRK13410        236 AEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRPV  315 (668)
T ss_pred             HHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHHH
Confidence            999876543              4677777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               ++++|+.|           |+++|+++| +..+..++|||||||+|||++|+++++    .++++.+.|++
T Consensus       316 ~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~l~Dv~  390 (668)
T PRK13410        316 KRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLI-PREPNQNVNPDEVVAVGAAIQAGILAG----ELKDLLLLDVT  390 (668)
T ss_pred             HHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHc-CCCcccCCCCchHHHHhHHHHHHhhcc----cccceeEEeec
Confidence                     12233333           999999999 567888999999999999999999987    46789999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |++||+++.+|.+.+|||+|++||++++.+|++..++|+.+.|++|||++..+.+|..||+|.|.++|+.++|.++|+|+
T Consensus       391 p~slgie~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~  470 (668)
T PRK13410        391 PLSLGLETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVA  470 (668)
T ss_pred             cccccceecCCeeEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhc-
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDA-  474 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~-  474 (549)
                      |++|.||+|+|++.+..||++..++|... .+|++++++++++++.++..+|+..+++.++||+||+|+|.+|++|.+. 
T Consensus       471 f~id~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~~~~  549 (668)
T PRK13410        471 FDIDANGILQVSATDRTTGREQSVTIQGA-STLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLIAQAERRLRDAA  549 (668)
T ss_pred             EEECCCcEEEEEEEEcCCCceeeeeeccc-ccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999988888765 6799999999999999999999999999999999999999999999752 


Q ss_pred             --c-CccChhHHHHHHHHHHHHHHHhhcCC-cCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         475 --G-NKLTESEKSRCREECDATLKWLDNNT-LADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       475 --~-~~~~~~e~~~i~~~l~~~~~Wl~~~~-~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                        . .++++++|+.+...++++++||+++. +...+.++++++.|+.+..++..|+.|
T Consensus       550 ~~~~~~~~~~~~~~~~~~l~~~~~wL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  607 (668)
T PRK13410        550 LEFGPYFAERQRRAVESAMRDVQDSLEQDDDRELDLAVADLQEALYGLNREVRAEYKE  607 (668)
T ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence              2 77899999999999999999999764 466777888999999999999999988

>PLN03184 chloroplast Hsp70; Provisional

Probab=100.00  E-value=1.8e-92  Score=767.53  Aligned_cols=518  Identities=47%  Similarity=0.799  Sum_probs=471.8

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      ++||||||||||+||++++|.+++|+|..|+|.+||+|+|.+ +++++|..|+.++.++|.++++++|||||+++.+  +
T Consensus        40 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~  117 (673)
T PLN03184         40 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--V  117 (673)
T ss_pred             CEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcCCCCEEECHHHHHhhhhCchhhhHHHHHhhCCCcch--h
Confidence            489999999999999999999999999999999999999975 4899999999999999999999999999999876  4


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.+||.++. .++...+.+...+  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||
T Consensus       118 ~~~~~~~~~~v~~~~~~~v~~~~~~~~--~~~speei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  195 (673)
T PLN03184        118 DEESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAG  195 (673)
T ss_pred             hhhhhcCCeEEEecCCCcEEEEEecCC--eEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5667789999985 4555555554445  689999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|++...  .+.++||||+||||||+|++++.++ .++++++.||.++||.+||.+|++|+
T Consensus       196 ~~AGl~v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~DvSi~~~~~~-~~eVla~~gd~~LGG~dfD~~L~~~~  272 (673)
T PLN03184        196 RIAGLEVLRIINEPTAASLAYGFEKK--SNETILVFDLGGGTFDVSVLEVGDG-VFEVLSTSGDTHLGGDDFDKRIVDWL  272 (673)
T ss_pred             HHCCCCeEEEeCcHHHHHHHhhcccC--CCCEEEEEECCCCeEEEEEEEecCC-EEEEEEecCCCccCHHHHHHHHHHHH
Confidence            99999999999999999999998754  5678999999999999999999888 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|+.+++              .+||++|                                                  
T Consensus       273 ~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~i  352 (673)
T PLN03184        273 ASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTPV  352 (673)
T ss_pred             HHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHHH
Confidence            999987654              5678777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               ++++|+.|           ||++|+++| +..+..++|||+|||+|||++|+++++    +++++.+.|++
T Consensus       353 ~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~~~dv~  427 (673)
T PLN03184        353 ENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLT-GKDPNVTVNPDEVVALGAAVQAGVLAG----EVSDIVLLDVT  427 (673)
T ss_pred             HHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHh-CCCcccccCcchHHHHHHHHHHHHhcc----CccceEEEecc
Confidence                     11222222           999999999 567788999999999999999999987    56789999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |++||+++.++.+.+|||+|++||++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.++|.++|+|+
T Consensus       428 p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~  507 (673)
T PLN03184        428 PLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVK  507 (673)
T ss_pred             cccceEEecCCeeEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG  475 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~  475 (549)
                      |.+|.||+|+|++.+..++++..+++... .+|++++++++++++.++..+|+..+++.++||+||+|+|.+|++|.+..
T Consensus       508 f~id~~GiL~V~a~~~~t~~~~~~~i~~~-~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l~e~~  586 (673)
T PLN03184        508 FDIDANGILSVSATDKGTGKKQDITITGA-STLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQLKELG  586 (673)
T ss_pred             EEeCCCCeEEEEEEecCCCeEEEEEeccc-ccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999988754 57999999999999999999999999999999999999999999996433


Q ss_pred             CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy3431         476 NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASA  535 (549)
Q Consensus       476 ~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~  535 (549)
                      .++++++++++.+.++++++||+.+   +.+++++++++|++.+.++..+++.++|+|++
T Consensus       587 ~~~~~eer~~l~~~l~~~e~wL~~~---d~~~ik~~~~~l~~~l~~l~~~~~~~~~~~~~  643 (673)
T PLN03184        587 DKVPADVKEKVEAKLKELKDAIASG---STQKMKDAMAALNQEVMQIGQSLYNQPGAGGA  643 (673)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            7899999999999999999999975   67899999999999999999998877655443

>PTZ00400 DnaK-type molecular chaperone; Provisional

Probab=100.00  E-value=1.9e-92  Score=767.14  Aligned_cols=513  Identities=51%  Similarity=0.848  Sum_probs=472.4

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      ++||||||||||+||++++|.+++++|..|+|.+||+|+|.+ +++++|..|+.++.++|.++++++|||||+.++++.+
T Consensus        42 ~viGIDlGTt~s~va~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~  121 (663)
T PTZ00400         42 DIVGIDLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDAT  121 (663)
T ss_pred             cEEEEEECcccEEEEEEeCCeeEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHHH
Confidence            599999999999999999999999999999999999999975 4899999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.+||.++. .++...+.  ..+  ..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||
T Consensus       122 ~~~~~~~p~~~~~~~~~~~~~~--~~~--~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  197 (663)
T PTZ00400        122 KKEQKILPYKIVRASNGDAWIE--AQG--KKYSPSQIGAFVLEKMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAG  197 (663)
T ss_pred             HhhhccCCeEEEecCCCceEEE--ECC--EEECHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence            9999999999886 44544444  445  689999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|+....  .+.++||||+||||||+||+++.++ .++++++.||.++||.+||.+|++||
T Consensus       198 ~~AGl~v~~li~EptAAAlay~~~~~--~~~~vlV~DlGgGT~DvSv~~~~~g-~~~v~a~~gd~~LGG~d~D~~l~~~l  274 (663)
T PTZ00400        198 KIAGLDVLRIINEPTAAALAFGMDKN--DGKTIAVYDLGGGTFDISILEILGG-VFEVKATNGNTSLGGEDFDQRILNYL  274 (663)
T ss_pred             HHcCCceEEEeCchHHHHHHhccccC--CCcEEEEEeCCCCeEEEEEEEecCC-eeEEEecccCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999998754  5789999999999999999999888 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|+++++              .+||++|                                                  
T Consensus       275 ~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i  354 (663)
T PTZ00400        275 IAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPC  354 (663)
T ss_pred             HHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHH
Confidence            999986654              4677777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               ++++|+.|           |+++|+++|+ ..+..++|||++||+|||++|+++++    ..+++.+.|++
T Consensus       355 ~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f~-~~~~~~~npdeaVA~GAAi~aa~l~~----~~~~~~~~dv~  429 (663)
T PTZ00400        355 EKCIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIFG-KEPSKGVNPDEAVAMGAAIQAGVLKG----EIKDLLLLDVT  429 (663)
T ss_pred             HHHHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHhC-CCcccCCCCccceeeccHHHHHhhcC----CccceEEEecc
Confidence                     11222222           9999999994 56788999999999999999999987    46789999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |++||+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.+.|.++|+|+
T Consensus       430 p~slgi~~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~  509 (663)
T PTZ00400        430 PLSLGIETLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVT  509 (663)
T ss_pred             ccceEEEecCCeeEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG  475 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~  475 (549)
                      |.+|.||+|+|++.+..+|+...+++... .+|++++++++++++.++..+|+..+++.++||+||+|+|.+|+.|.+..
T Consensus       510 f~id~~Gil~v~a~~~~~~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~e~~  588 (663)
T PTZ00400        510 FDVDANGIMNISAVDKSTGKKQEITIQSS-GGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLIYSVEKQLSDLK  588 (663)
T ss_pred             EEECCCCCEEEEEEeccCCcEEEEEeecc-ccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999988765 57999999999999999999999999999999999999999999997533


Q ss_pred             CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         476 NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       476 ~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      ..+++++++.+.+.++++++||+++   +.++|++++++|++.+.++..+++...
T Consensus       589 ~~~s~~ere~i~~~l~~~~~WL~~~---d~~~i~~k~~eL~~~l~~l~~k~y~~~  640 (663)
T PTZ00400        589 DKISDADKDELKQKITKLRSTLSSE---DVDSIKDKTKQLQEASWKISQQAYKQG  640 (663)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            7899999999999999999999975   678999999999999999999876543

>PRK00290 dnaK molecular chaperone DnaK; Provisional

Probab=100.00  E-value=4.8e-91  Score=757.36  Aligned_cols=511  Identities=56%  Similarity=0.891  Sum_probs=470.3

Q ss_pred             CC-EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEe-CCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh
Q psy3431           1 MP-AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP   78 (549)
Q Consensus         1 m~-vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~   78 (549)
                      |+ +||||||||||+||++++|.+++++|..|+|.+||+|+|. ++++++|..|+.++.++|.++++++|||||++  ++
T Consensus         1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~   78 (627)
T PRK00290          1 MGKIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DE   78 (627)
T ss_pred             CCcEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeCCCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--ch
Confidence            54 9999999999999999999999999999999999999997 56899999999999999999999999999999  67


Q ss_pred             HHHhhcccCCeEEeec-CCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431          79 KIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~  157 (549)
                      .++...+.+||.++.. ++...+  .++|  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus        79 ~~~~~~~~~p~~~~~~~~~~~~~--~~~~--~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~  154 (627)
T PRK00290         79 EVQKDIKLVPYKIVKADNGDAWV--EIDG--KKYTPQEISAMILQKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKD  154 (627)
T ss_pred             HHHHHhhcCCeEEEEcCCCceEE--EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHH
Confidence            7888889999999863 444444  4455  6899999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHH
Q psy3431         158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS  237 (549)
Q Consensus       158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~  237 (549)
                      ||++|||++++||+||+|||++|++.+.  .+.++||||+||||||+|++++.++ .++++++.||.++||.+||.+|++
T Consensus       155 Aa~~AGl~v~~li~EptAAAl~y~~~~~--~~~~vlV~D~GggT~dvsv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~  231 (627)
T PRK00290        155 AGKIAGLEVLRIINEPTAAALAYGLDKK--GDEKILVYDLGGGTFDVSILEIGDG-VFEVLSTNGDTHLGGDDFDQRIID  231 (627)
T ss_pred             HHHHcCCceEEEecchHHHHHHhhhccC--CCCEEEEEECCCCeEEEEEEEEeCC-eEEEEEecCCCCcChHHHHHHHHH
Confidence            9999999999999999999999998764  5789999999999999999999888 999999999999999999999999


Q ss_pred             HHHHHHHhccc--------------cccccCC------------------------------------------------
Q psy3431         238 HLAEEFKRKCR--------------SASDVGD------------------------------------------------  255 (549)
Q Consensus       238 ~l~~~~~~~~~--------------~~~e~~K------------------------------------------------  255 (549)
                      |+.++|+.+++              .+||++|                                                
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~  311 (627)
T PRK00290        232 YLADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIE  311 (627)
T ss_pred             HHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHH
Confidence            99999987654              4677777                                                


Q ss_pred             -----------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEE
Q psy3431         256 -----------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVD  313 (549)
Q Consensus       256 -----------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d  313 (549)
                                 ++.+|+.|           |++.|+++| +..+..++|||+|||+|||++|+.+++    +++++.+.|
T Consensus       312 ~i~~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f-g~~~~~~~npdeava~GAa~~aa~l~~----~~~~~~~~d  386 (627)
T PRK00290        312 PCKQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEPNKGVNPDEVVAIGAAIQGGVLAG----DVKDVLLLD  386 (627)
T ss_pred             HHHHHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHh-CCCCCcCcCChHHHHHhHHHHHHHhcC----Cccceeeee
Confidence                       11122222           999999999 567888999999999999999999987    567899999


Q ss_pred             eccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEE
Q psy3431         314 VTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKID  393 (549)
Q Consensus       314 ~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~  393 (549)
                      ++|++||++..+|.+.+|||+|+++|++++.+|++..++|+.+.|++|||++..+.+|..||+|.|.++|+.++|.++|+
T Consensus       387 ~~~~slgi~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~  466 (627)
T PRK00290        387 VTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIE  466 (627)
T ss_pred             ccceEEEEEecCCeEEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998999


Q ss_pred             EEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhh
Q psy3431         394 VTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDD  473 (549)
Q Consensus       394 v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~  473 (549)
                      |+|.+|.||+|+|++.+..+|+...+++... .+|++++++++++++.++..+|+..+++.++||+||+|+|.+|++|++
T Consensus       467 v~f~~d~~gil~v~a~~~~~~~~~~~~i~~~-~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l~~  545 (627)
T PRK00290        467 VTFDIDANGIVHVSAKDKGTGKEQSITITAS-SGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLIYQTEKTLKE  545 (627)
T ss_pred             EEEEECCCceEEEEEEEccCCceeEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988765 579999999999999999999999999999999999999999999974


Q ss_pred             ccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3431         474 AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGG  529 (549)
Q Consensus       474 ~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~  529 (549)
                      ...++++++++++.+.++++++||+++   +.++|++++++|+++++++..|+++.
T Consensus       546 ~~~~~~~~e~~~i~~~l~~~~~wL~~~---~~~~i~~k~~~L~~~~~~~~~~~~~~  598 (627)
T PRK00290        546 LGDKVPADEKEKIEAAIKELKEALKGE---DKEAIKAKTEELTQASQKLGEAMYQQ  598 (627)
T ss_pred             HhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            337889999999999999999999976   77899999999999999999998764

>CHL00094 dnaK heat shock protein 70

Probab=100.00  E-value=1.4e-89  Score=743.45  Aligned_cols=511  Identities=51%  Similarity=0.822  Sum_probs=466.8

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .+||||||||||+||++++|.+++++|..|+|.+||+|+|.++ ++++|..|+.+...+|.++++++||+||+.+++  +
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~--~   80 (621)
T CHL00094          3 KVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE--I   80 (621)
T ss_pred             ceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcCCCCEEECHHHHHhHHhCccceehhhHHhcCCChHH--H
Confidence            5999999999999999999999999999999999999999764 799999999999999999999999999999865  5


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.+||.+.. .++...+.+...+  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||
T Consensus        81 ~~~~~~~~~~v~~~~~g~i~~~~~~~~--~~~s~eei~a~iL~~l~~~ae~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa  158 (621)
T CHL00094         81 SEEAKQVSYKVKTDSNGNIKIECPALN--KDFSPEEISAQVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAG  158 (621)
T ss_pred             HhhhhcCCeEEEECCCCCEEEEEecCC--eEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5666779999886 4565555554444  689999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++||+||+|||++|+....  .+.++||||+||||||+||+++.++ .++++++.|+.++||.+||.+|++|+
T Consensus       159 ~~AGl~v~~li~EptAAAlay~~~~~--~~~~vlV~DlGgGT~DvSv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~~  235 (621)
T CHL00094        159 KIAGLEVLRIINEPTAASLAYGLDKK--NNETILVFDLGGGTFDVSILEVGDG-VFEVLSTSGDTHLGGDDFDKKIVNWL  235 (621)
T ss_pred             HHcCCceEEEeccHHHHHHHhccccC--CCCEEEEEEcCCCeEEEEEEEEcCC-EEEEEEEecCCCcChHHHHHHHHHHH
Confidence            99999999999999999999998754  5678999999999999999999888 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|+.+++              .+||++|                                                  
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i  315 (621)
T CHL00094        236 IKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPV  315 (621)
T ss_pred             HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence            999987654              5677777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               ++.+|+.|           |+++|+++|| ..+..++|||+|||+|||++|+.+++    ..+++.+.|++
T Consensus       316 ~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~~~~~pdeava~GAA~~aa~ls~----~~~~~~~~d~~  390 (621)
T CHL00094        316 ENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLLG-KKPNQSVNPDEVVAIGAAVQAGVLAG----EVKDILLLDVT  390 (621)
T ss_pred             HHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHhC-CCcCcCCCchhHHHhhhHHHHHHhcC----Cccceeeeeee
Confidence                     11122222           9999999994 67888999999999999999999987    46788999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |++||++..+|.+.+|||+|+++|++++.+|++..++|+.+.|.+|||++..+.+|..||+|.|.++|+.++|.++|+|+
T Consensus       391 ~~~lgi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~  470 (621)
T CHL00094        391 PLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVT  470 (621)
T ss_pred             ceeeeeeccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999899999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG  475 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~  475 (549)
                      |++|.||+|+|++.+..||+...+++.+. .+|++++++++++++.++..+|+..+++.+++|+||+|+|.+|++|.+..
T Consensus       471 f~id~~Gil~v~~~~~~t~~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l~~~~  549 (621)
T CHL00094        471 FDIDANGILSVTAKDKGTGKEQSITIQGA-STLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLCYQAEKQLKELK  549 (621)
T ss_pred             EEECCCCeEEEEEeeccCCceeeeeeccc-hhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            99999999999999999999988888754 57999999999999999999999999999999999999999999997522


Q ss_pred             CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         476 NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       476 ~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      .++++++|+++.+.++++++||+++   +.+++++++++|++.++++..+++.
T Consensus       550 ~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~kl~~  599 (621)
T CHL00094        550 DKISEEKKEKIENLIKKLRQALQND---NYESIKSLLEELQKALMEIGKEVYS  599 (621)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7889999999999999999999975   5589999999999999999998866

>TIGR02350 prok_dnaK chaperone protein DnaK

Probab=100.00  E-value=1.7e-89  Score=743.25  Aligned_cols=509  Identities=57%  Similarity=0.897  Sum_probs=466.5

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .|||||||||||+||++++|.+++++|..|+|.+||+|+|.++ ++++|..|+.++.++|.++++++||+||+++  +.+
T Consensus         1 ~viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~--~~~   78 (595)
T TIGR02350         1 KIIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPENTIYSIKRFMGRRF--DEV   78 (595)
T ss_pred             CEEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhhhhCchhhhHHHHHHhCCCc--hHH
Confidence            4899999999999999999999999999999999999999866 8999999999999999999999999999998  346


Q ss_pred             HhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                      +...+.+||.+...++...+.+  ++  ..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++||+
T Consensus        79 ~~~~~~~~~~v~~~~~~~~~~v--~~--~~~~peel~a~~L~~l~~~a~~~~~~~v~~~VItVPa~f~~~qR~a~~~Aa~  154 (595)
T TIGR02350        79 TEEAKRVPYKVVGDGGDVRVKV--DG--KEYTPQEISAMILQKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGK  154 (595)
T ss_pred             HHHhhcCCeeEEcCCCceEEEE--CC--EEecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            7778889999655666555554  45  6899999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +|||++++||+||+|||++|++.+. ..+.++||||+||||||+|++++.++ .++++++.|+..+||.+||.+|++|+.
T Consensus       155 ~AGl~v~~li~EptAAAl~y~~~~~-~~~~~vlV~D~Gggt~dvsv~~~~~~-~~~v~~~~gd~~lGG~d~D~~l~~~~~  232 (595)
T TIGR02350       155 IAGLEVLRIINEPTAAALAYGLDKS-KKDEKILVFDLGGGTFDVSILEIGDG-VFEVLSTAGDTHLGGDDFDQRIIDWLA  232 (595)
T ss_pred             HcCCceEEEecchHHHHHHHhhccc-CCCcEEEEEECCCCeEEEEEEEecCC-eEEEEEecCCcccCchhHHHHHHHHHH
Confidence            9999999999999999999998753 35789999999999999999999988 999999999999999999999999999


Q ss_pred             HHHHhccc--------------cccccCC---------------------------------------------------
Q psy3431         241 EEFKRKCR--------------SASDVGD---------------------------------------------------  255 (549)
Q Consensus       241 ~~~~~~~~--------------~~~e~~K---------------------------------------------------  255 (549)
                      ++|+++++              .+||++|                                                   
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~  312 (595)
T TIGR02350       233 DEFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVR  312 (595)
T ss_pred             HHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence            99987654              4677777                                                   


Q ss_pred             --------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEecc
Q psy3431         256 --------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTP  316 (549)
Q Consensus       256 --------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~  316 (549)
                              ++.+|+.|           |++.|+++|+ ..+..++|||+|||+|||++|+.+++    .++++.+.|++|
T Consensus       313 ~~l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~-~~~~~~~~pdeava~GAa~~aa~l~~----~~~~~~~~d~~~  387 (595)
T TIGR02350       313 QALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFG-KEPNKSVNPDEVVAIGAAIQGGVLKG----DVKDVLLLDVTP  387 (595)
T ss_pred             HHHHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhC-CcccCCcCcHHHHHHHHHHHHHHhcC----Ccccceeeeccc
Confidence                    11122222           9999999995 67888999999999999999999987    367889999999


Q ss_pred             ccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEE
Q psy3431         317 LSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTF  396 (549)
Q Consensus       317 ~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~  396 (549)
                      ++||+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||++.|+++|+.+.|.++|+++|
T Consensus       388 ~~igi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f  467 (595)
T TIGR02350       388 LSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTF  467 (595)
T ss_pred             ceeEEEecCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccC
Q psy3431         397 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGN  476 (549)
Q Consensus       397 ~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~  476 (549)
                      .+|.||+|+|++.+..+|+...++++.. .+||+++++++++++.++..+|+..+++.+++|+||+|||.+|++|++...
T Consensus       468 ~~d~~G~l~v~~~~~~~~~~~~~~i~~~-~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l~~~~~  546 (595)
T TIGR02350       468 DIDANGILHVSAKDKGTGKEQSITITAS-SGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLAYQAEKTLKEAGD  546 (595)
T ss_pred             EEcCCCeEEEEEEEccCCceEEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999988765 579999999999999999999999999999999999999999999975347


Q ss_pred             ccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy3431         477 KLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH  527 (549)
Q Consensus       477 ~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~  527 (549)
                      ++++++++++.+.++++++||+++   +..++++++++|++.++++..+++
T Consensus       547 ~~~~~e~~~l~~~l~~~~~wL~~~---d~~~i~~~~~~l~~~~~~~~~~~~  594 (595)
T TIGR02350       547 KLPAEEKEKIEKAVAELKEALKGE---DVEEIKAKTEELQQALQKLAEAMY  594 (595)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999999976   678999999999999999997753

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.

>PRK05183 hscA chaperone protein HscA; Provisional

Probab=100.00  E-value=9.5e-89  Score=733.45  Aligned_cols=511  Identities=40%  Similarity=0.646  Sum_probs=466.4

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      .+||||||||||+||++.+|.+++++|..|++.+||+|+|.++++++|..|+.++.++|.++++++||+||+.+.+  ++
T Consensus        20 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~~   97 (616)
T PRK05183         20 LAVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLEDGIEVGYEARANAAQDPKNTISSVKRFMGRSLAD--IQ   97 (616)
T ss_pred             eEEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcCCCEEEcHHHHHhhHhCchhhHHHHHHHhCCCchh--hh
Confidence            4799999999999999999999999999999999999999988999999999999999999999999999999876  34


Q ss_pred             hhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        82 ~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                      .....+||.+.. .++.+.+.+  .+  ..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||+
T Consensus        98 ~~~~~~~~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~  173 (616)
T PRK05183         98 QRYPHLPYQFVASENGMPLIRT--AQ--GLKSPVEVSAEILKALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAAR  173 (616)
T ss_pred             hhhhcCCeEEEecCCCceEEEe--cC--CeEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence            455678998875 456655554  23  3789999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +|||++++||+||+|||++|++...  .+.++||||+||||||+|++++.++ .++++++.||.++||.+||.+|++|+.
T Consensus       174 ~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGGGT~DvSv~~~~~~-~~evlat~gd~~lGG~d~D~~l~~~~~  250 (616)
T PRK05183        174 LAGLNVLRLLNEPTAAAIAYGLDSG--QEGVIAVYDLGGGTFDISILRLSKG-VFEVLATGGDSALGGDDFDHLLADWIL  250 (616)
T ss_pred             HcCCCeEEEecchHHHHHHhhcccC--CCCEEEEEECCCCeEEEEEEEeeCC-EEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence            9999999999999999999998754  4789999999999999999999888 999999999999999999999999999


Q ss_pred             HHHHhccc----------cccccCC-------------------------------------------------CCCChH
Q psy3431         241 EEFKRKCR----------SASDVGD-------------------------------------------------HHGDAH  261 (549)
Q Consensus       241 ~~~~~~~~----------~~~e~~K-------------------------------------------------~~~~i~  261 (549)
                      ++++....          .+||++|                                                 ++++|+
T Consensus       251 ~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~  330 (616)
T PRK05183        251 EQAGLSPRLDPEDQRLLLDAARAAKEALSDADSVEVSVALWQGEITREQFNALIAPLVKRTLLACRRALRDAGVEADEVK  330 (616)
T ss_pred             HHcCCCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEecCCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence            98875442          5677777                                                 233455


Q ss_pred             HH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccceEEeeCCeeeE
Q psy3431         262 FV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTK  330 (549)
Q Consensus       262 ~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~igi~~~~~~~~~  330 (549)
                      .|           |++.|+++|+ ..+..++|||+|||+|||++|+.+++  .+..+++.+.|++|++||++..+|.+.+
T Consensus       331 ~ViLvGGssriP~v~~~l~~~fg-~~~~~~~npdeaVA~GAAi~a~~l~~--~~~~~~~~l~dv~p~slgi~~~~g~~~~  407 (616)
T PRK05183        331 EVVMVGGSTRVPLVREAVGEFFG-RTPLTSIDPDKVVAIGAAIQADILAG--NKPDSDMLLLDVIPLSLGLETMGGLVEK  407 (616)
T ss_pred             EEEEECCcccChHHHHHHHHHhc-cCcCcCCCchHHHHHHHHHHHHHhcc--ccccCceEEEeeccccccceecCCeEEE
Confidence            55           9999999995 55667899999999999999999987  4456789999999999999999999999


Q ss_pred             EEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCCCccEEEEEEe
Q psy3431         331 LIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKD  410 (549)
Q Consensus       331 li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~~g~l~v~~~~  410 (549)
                      |||+|++||++++..|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus       408 ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~Gil~V~a~~  487 (616)
T PRK05183        408 IIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDADGLLSVTAME  487 (616)
T ss_pred             EEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCCCeEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHH
Q psy3431         411 TSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREEC  490 (549)
Q Consensus       411 ~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l  490 (549)
                      ..+|++..+.+.+. .+|++++++++++++.++..+|+..+++.+++|++|+|+|.+++.+.+....+++++|+.+.+.+
T Consensus       488 ~~~~~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  566 (616)
T PRK05183        488 KSTGVEASIQVKPS-YGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVLEALQAALAADGDLLSAAERAAIDAAM  566 (616)
T ss_pred             cCCCcEEEeccccc-ccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence            99999999988765 46999999999999999999999999999999999999999999996544678999999999999


Q ss_pred             HHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         491 DATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       491 ~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      +++++||+.+   +.+++++++++|++.+.++..+..+
T Consensus       567 ~~~~~~l~~~---d~~~~~~~~~~l~~~~~~~~~~~~~  601 (616)
T PRK05183        567 AALREVAQGD---DADAIEAAIKALDKATQEFAARRMD  601 (616)
T ss_pred             HHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999864   7789999999999999999986554

>TIGR01991 HscA Fe-S protein assembly chaperone HscA

Probab=100.00  E-value=1.9e-88  Score=729.80  Aligned_cols=509  Identities=40%  Similarity=0.637  Sum_probs=462.5

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      +||||||||||+||++++|.+++++|..|++.+||+|+|.++ .+++|..|+.++.++|.++++++|||||+.+.+... 
T Consensus         1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~~-   79 (599)
T TIGR01991         1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIKT-   79 (599)
T ss_pred             CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchhh-
Confidence            589999999999999999999999999999999999999866 899999999999999999999999999999877532 


Q ss_pred             hhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        82 ~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                        .+.+||.+.. .++...+.+  .+  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||+
T Consensus        80 --~~~~~~~~~~~~~~~~~~~~--~~--~~~~p~ei~a~iL~~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~  153 (599)
T TIGR01991        80 --FSILPYRFVDGPGEMVRLRT--VQ--GTVTPVEVSAEILKKLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAAR  153 (599)
T ss_pred             --cccCCEEEEEcCCCceEEEe--CC--CEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence              5678998875 345554444  33  3789999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +|||++++||+||+|||++|++.+.  .+.++||||+||||||+|++++.++ .++++++.||.++||.+||.+|++|+.
T Consensus       154 ~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGgGT~DvSi~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~l~  230 (599)
T TIGR01991       154 LAGLNVLRLLNEPTAAAVAYGLDKA--SEGIYAVYDLGGGTFDVSILKLTKG-VFEVLATGGDSALGGDDFDHALAKWIL  230 (599)
T ss_pred             HcCCCceEEecCHHHHHHHHhhccC--CCCEEEEEEcCCCeEEEEEEEEcCC-eEEEEEEcCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999998764  5788999999999999999999888 999999999999999999999999999


Q ss_pred             HHHHhccc----------cccccCC-----------------------------------------------------CC
Q psy3431         241 EEFKRKCR----------SASDVGD-----------------------------------------------------HH  257 (549)
Q Consensus       241 ~~~~~~~~----------~~~e~~K-----------------------------------------------------~~  257 (549)
                      ++++....          .+||++|                                                     ++
T Consensus       231 ~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~L~~a~~~~  310 (599)
T TIGR01991       231 KQLGISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTLDGKDFKGKLTRDEFEALIQPLVQKTLSICRRALRDAGLSV  310 (599)
T ss_pred             HhhCCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEECCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence            88753311          4566666                                                     33


Q ss_pred             CChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccceEEeeCC
Q psy3431         258 GDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGG  326 (549)
Q Consensus       258 ~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~igi~~~~~  326 (549)
                      .+|+.|           |+++|+++|+ ..+..++|||+|||+|||++|+.+++  .+..+++.+.|++|++||+++.+|
T Consensus       311 ~~id~ViLvGGssriP~V~~~l~~~f~-~~~~~~~npdeaVA~GAai~a~~l~~--~~~~~~~~l~dv~p~slgi~~~~g  387 (599)
T TIGR01991       311 EEIKGVVLVGGSTRMPLVRRAVAELFG-QEPLTDIDPDQVVALGAAIQADLLAG--NRIGNDLLLLDVTPLSLGIETMGG  387 (599)
T ss_pred             hhCCEEEEECCcCCChHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHHHHHHhcc--ccccCceEEEEeeeeeeEEEecCC
Confidence            445554           9999999995 56677899999999999999999997  456678999999999999999999


Q ss_pred             eeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCCCccEEE
Q psy3431         327 VMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNV  406 (549)
Q Consensus       327 ~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~~g~l~v  406 (549)
                      .+.+|||+|++||++++..|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.+.|.++|+|+|++|.||+|+|
T Consensus       388 ~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~V  467 (599)
T TIGR01991       388 LVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLTV  467 (599)
T ss_pred             EEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCCCeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHH
Q psy3431         407 TAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRC  486 (549)
Q Consensus       407 ~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i  486 (549)
                      ++.+..||++..+.+.+. .+|++++++++++++.++..+|+..+++.+++|++|+|+|.++..+.+....+++++|+.+
T Consensus       468 ~a~~~~t~~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  546 (599)
T TIGR01991       468 SAQEQSTGVEQSIQVKPS-YGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEALQAALAADGDLLSEDERAAI  546 (599)
T ss_pred             EEEECCCCcEEEEecccc-cCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHH
Confidence            999999999999888765 5699999999999999999999999999999999999999999999654468899999999


Q ss_pred             HHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         487 REECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       487 ~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      ...++++++||+++   +.++++++.++|++.+.++..+..+
T Consensus       547 ~~~l~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  585 (599)
T TIGR01991       547 DAAMEALQKALQGD---DADAIKAAIEALEEATDNFAARRMD  585 (599)
T ss_pred             HHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999975   6789999999999999999976554

The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.

>PRK01433 hscA chaperone protein HscA; Provisional

Probab=100.00  E-value=3.3e-86  Score=707.08  Aligned_cols=491  Identities=36%  Similarity=0.548  Sum_probs=434.0

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh---
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP---   78 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~---   78 (549)
                      .+||||||||||+||++.+|.+++++|..|++.+||+|+|.++++++|..|          +++++||++|+.+++.   
T Consensus        20 ~viGIDlGTT~S~va~~~~~~~~ii~n~~g~~~tPS~V~f~~~~~~vG~~A----------ti~~~KrliG~~~~~~~~~   89 (595)
T PRK01433         20 IAVGIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSNNFTIGNNK----------GLRSIKRLFGKTLKEILNT   89 (595)
T ss_pred             eEEEEEcCcccEEEEEEeCCeeEEEECCCCCeecCeEEEEcCCCEEECchh----------hHHHHHHHhCCCchhhccc
Confidence            389999999999999999999999999999999999999998889999987          7899999999998752   


Q ss_pred             -HHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431          79 -KIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~  157 (549)
                       .+....+.+    .. .+...+.+.+.+  ..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++
T Consensus        90 ~~~~~~~k~~----~~-~~~~~~~~~~~~--~~~speei~a~iL~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~  162 (595)
T PRK01433         90 PALFSLVKDY----LD-VNSSELKLNFAN--KQLRIPEIAAEIFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVML  162 (595)
T ss_pred             hhhHhhhhhe----ee-cCCCeeEEEECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHH
Confidence             222111111    11 122334455555  7899999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHH
Q psy3431         158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS  237 (549)
Q Consensus       158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~  237 (549)
                      ||++||+++++||+||+|||++|++...  ...++||||+||||||+|++++.++ .++|+++.||.++||.+||.+|++
T Consensus       163 Aa~~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGGGT~DvSi~~~~~~-~~~V~at~gd~~lGG~d~D~~l~~  239 (595)
T PRK01433        163 AAKIAGFEVLRLIAEPTAAAYAYGLNKN--QKGCYLVYDLGGGTFDVSILNIQEG-IFQVIATNGDNMLGGNDIDVVITQ  239 (595)
T ss_pred             HHHHcCCCEEEEecCcHHHHHHHhcccC--CCCEEEEEECCCCcEEEEEEEEeCC-eEEEEEEcCCcccChHHHHHHHHH
Confidence            9999999999999999999999998753  4678999999999999999999988 999999999999999999999999


Q ss_pred             HHHHHHHhccc----cccccCC-------------------------------------------CCCChHHH-------
Q psy3431         238 HLAEEFKRKCR----SASDVGD-------------------------------------------HHGDAHFV-------  263 (549)
Q Consensus       238 ~l~~~~~~~~~----~~~e~~K-------------------------------------------~~~~i~~V-------  263 (549)
                      |++++|.....    ..||++|                                           ...+|+.|       
T Consensus       240 ~~~~~~~~~~~~~~~~~~ekaK~~LS~~~~~~~~~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~~~~Id~ViLvGGss  319 (595)
T PRK01433        240 YLCNKFDLPNSIDTLQLAKKAKETLTYKDSFNNDNISINKQTLEQLILPLVERTINIAQECLEQAGNPNIDGVILVGGAT  319 (595)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHhcCCCcccccceEEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCcEEEEECCcc
Confidence            99998854332    3466665                                           13456665       


Q ss_pred             ----HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccceEEeeCCeeeEEEccCCCCC
Q psy3431         264 ----VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIP  339 (549)
Q Consensus       264 ----i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp  339 (549)
                          |++.|+++| +..+..++|||+|||+|||++|+.+++    ...++.+.|++|++||+++.+|.+.+|||||++||
T Consensus       320 riP~v~~~l~~~f-~~~~~~~~npdeaVA~GAAi~a~~l~~----~~~~~~l~Dv~p~slgi~~~~g~~~~ii~rnt~iP  394 (595)
T PRK01433        320 RIPLIKDELYKAF-KVDILSDIDPDKAVVWGAALQAENLIA----PHTNSLLIDVVPLSLGMELYGGIVEKIIMRNTPIP  394 (595)
T ss_pred             cChhHHHHHHHHh-CCCceecCCchHHHHHHHHHHHHHhhC----CccceEEEEecccceEEEecCCEEEEEEECCCccc
Confidence                999999999 466778999999999999999999986    23578899999999999999999999999999999


Q ss_pred             cccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCCCccEEEEEEecCCCCceeE
Q psy3431         340 CKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNI  419 (549)
Q Consensus       340 ~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i  419 (549)
                      +++++.|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|.+|.||+|+|++.+..||++..+
T Consensus       395 ~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id~~Gil~V~a~~~~t~~~~~~  474 (595)
T PRK01433        395 ISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDADGILSVSAYEKISNTSHAI  474 (595)
T ss_pred             ceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEECCCCcEEEEEEEcCCCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhc
Q psy3431         420 TIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDN  499 (549)
Q Consensus       420 ~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~  499 (549)
                      .|... ..|+++|+++++++.+++..+|...+++.+++|++|++++.+++.+++....+++++|+.+.+.+++.++||+.
T Consensus       475 ~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~l~~  553 (595)
T PRK01433        475 EVKPN-HGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERAIAELTTLLSESEISIINSLLDNIKEAVHA  553 (595)
T ss_pred             EecCC-CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhc
Confidence            99765 46999999999999999999999999999999999999999999997533668899999999999999999985


Q ss_pred             CCcCCHHHHHHHHHHHHHHHHH
Q psy3431         500 NTLADKEEYQDKLQQLQKSCMP  521 (549)
Q Consensus       500 ~~~a~~~~~~~kl~~L~~~~~~  521 (549)
                      +   +...+++++++|+....+
T Consensus       554 ~---~~~~~~~~~~~~~~~~~~  572 (595)
T PRK01433        554 R---DIILINNSIKEFKSKIKK  572 (595)
T ss_pred             C---CHHHHHHHHHHHHHHHHH
Confidence            4   555666666666666666

>KOG0102|consensus

Probab=100.00  E-value=3.5e-88  Score=665.60  Aligned_cols=518  Identities=54%  Similarity=0.860  Sum_probs=485.2

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      +|+|||+||||||+|++.++.+.++.|..|.|.+||+|+|..+ ++++|..|+++...+|.|+++.-||+||+.|.+|.+
T Consensus        28 ~vigidlgttnS~va~meg~~~kiienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatKrligRrf~d~ev  107 (640)
T KOG0102|consen   28 KVIGIDLGTTNSCVAVMEGKKPKIIENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATKRLIGRRFDDPEV  107 (640)
T ss_pred             ceeeEeeeccceeEEEEeCCCceEeecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEehhhhhhhccCHHH
Confidence            4899999999999999999999999999999999999999655 999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +.+++..||+++. .++...+..  .|  ..++|.++.+++|.+++++|+++++..+..+|+||||||++.||+++++|.
T Consensus       108 q~~~k~vpyKiVk~~ngdaw~e~--~G--~~~spsqig~~vl~kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag  183 (640)
T KOG0102|consen  108 QKDIKQVPYKIVKASNGDAWVEA--RG--KQYSPSQIGAFVLMKMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAG  183 (640)
T ss_pred             HHHHHhCCcceEEccCCcEEEEe--CC--eEecHHHHHHHHHHHHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhh
Confidence            9999999999997 566666555  56  899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++||++++++|+||+|||++|+++..  ....++|||+||||||++|+.+.+| .|++.++.||.++||++||..+++|+
T Consensus       184 ~iagl~vlrvineptaaalaygld~k--~~g~iaV~dLgggtfdisilei~~g-vfevksTngdtflggedfd~~~~~~~  260 (640)
T KOG0102|consen  184 QIAGLNVLRVINEPTAAALAYGLDKK--EDGVIAVFDLGGGTFDISILEIEDG-VFEVKSTNGDTHLGGEDFDNALVRFI  260 (640)
T ss_pred             hhccceeeccCCccchhHHhhccccc--CCCceEEEEcCCceeeeeeehhccc-eeEEEeccCccccChhHHHHHHHHHH
Confidence            99999999999999999999999976  3789999999999999999999999 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      ...|+...+              +++|++|                                                  
T Consensus       261 v~~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~  340 (640)
T KOG0102|consen  261 VSEFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIEPC  340 (640)
T ss_pred             HHhhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHH
Confidence            999987655              6777777                                                  


Q ss_pred             ---------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEec
Q psy3431         256 ---------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVT  315 (549)
Q Consensus       256 ---------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~  315 (549)
                               +.+||++|           +++.+++.| ++.+...+||||+||.|||++++.+++    .++++.+.|++
T Consensus       341 ~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f-gk~p~~~vnPdeava~GAaiqggvl~g----eVkdvlLLdVt  415 (640)
T KOG0102|consen  341 KKALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF-GKGPSKGVNPDEAVAGGAAIQGGVLSG----EVKDVLLLDVT  415 (640)
T ss_pred             HHHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh-CCCCCCCcCCcchhccchhhccchhhc----cccceeeeecc
Confidence                     55788888           999999999 678889999999999999999999998    78999999999


Q ss_pred             cccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEE
Q psy3431         316 PLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVT  395 (549)
Q Consensus       316 ~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~  395 (549)
                      |+++|++..+|.|..|||+|+.||++++..|.+..|+|+.++|+++||++....+|..+|+|.+.|+||.|+|.|+|.|+
T Consensus       416 pLsLgietlggvft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVt  495 (640)
T KOG0102|consen  416 PLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVT  495 (640)
T ss_pred             hHHHHHHhhhhhheecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q psy3431         396 FDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG  475 (549)
Q Consensus       396 ~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~  475 (549)
                      |.+|.||+++|+|.++.|||.+++++... ++||++|+++|+.+.+++...|+.++++.+..|..++++|.....+.+..
T Consensus       496 fDIdanGI~~vsA~dk~t~K~qsi~i~~s-ggLs~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~~~  574 (640)
T KOG0102|consen  496 FDIDANGIGTVSAKDKGTGKSQSITIASS-GGLSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLKEFE  574 (640)
T ss_pred             EeecCCceeeeehhhcccCCccceEEeec-CCCCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhhhhh
Confidence            99999999999999999999999999887 55999999999999999999999999999999999999999999887766


Q ss_pred             CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3431         476 NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG  532 (549)
Q Consensus       476 ~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~  532 (549)
                      ..++.++..+|...+..+.+.+..-...+.++++.+...|++...|++.-++..++.
T Consensus       575 ~~~~~~~~~~i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~~lkl~es~~k~~~~  631 (640)
T KOG0102|consen  575 EKIPAEECEKLEEKISDLRELVANKDSGDMEEIKKAMSALQQASLKLFESAYKNMGA  631 (640)
T ss_pred             hhCcHHHHHHHHHHHHHHHHHHhhhccCChhhHHHHHHHHHHhhhHHHHHHHhhhcc
Confidence            777777778999999999988874333355899999999999999999888776544

>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins

Probab=100.00  E-value=1e-84  Score=713.08  Aligned_cols=517  Identities=49%  Similarity=0.846  Sum_probs=470.2

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHHh
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQ   82 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~   82 (549)
                      ||||||||+||+||++++|.+++|.|..|+|++||+|+|.++++++|..|...+.++|+++++++|||||+.++++.++.
T Consensus         1 viGID~Gt~~~~va~~~~~~~~ii~~~~~~~~~ps~v~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~~   80 (602)
T PF00012_consen    1 VIGIDLGTTNSKVAVFKNGKPEIILNEEGKRKTPSVVSFSDNERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQK   80 (602)
T ss_dssp             EEEEEE-SSEEEEEEEETTEEEEE--TTS-SSEESEEEEESSCEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHHH
T ss_pred             CEEEEeccCCEEEEEEEeccccccccccccccccceeeEeeecccCCcchhhhcccccccccccccccccccccccccch
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431          83 DMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI  161 (549)
Q Consensus        83 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~  161 (549)
                      ..+.+||.+.. .++...+.+.+.|+...++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++||+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~~~~Aa~~  160 (602)
T PF00012_consen   81 EKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMAEKYLGEKVTDVVITVPAYFTDEQRQALRDAAEL  160 (602)
T ss_dssp             HHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEE-TT--HHHHHHHHHHHHH
T ss_pred             hhhcccccccccccccccccccccccceeeeeecccccchhhhcccchhhcccccccceeeechhhhhhhhhcccccccc
Confidence            99999999986 48888999998888789999999999999999999999999999999999999999999999999999


Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      |||++++||+||+|||++|++.+.. .++++||||+||||+|+|++++.++ .++++++.++..+||.+||.+|++|+.+
T Consensus       161 agl~~~~li~Ep~Aaa~~y~~~~~~-~~~~vlv~D~Gggt~dvs~~~~~~~-~~~v~~~~~~~~lGG~~~D~~l~~~~~~  238 (602)
T PF00012_consen  161 AGLNVLRLINEPTAAALAYGLERSD-KGKTVLVVDFGGGTFDVSVVEFSNG-QFEVLATAGDNNLGGRDFDEALAEYLLE  238 (602)
T ss_dssp             TT-EEEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEEESSEEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred             cccccceeecccccccccccccccc-cccceeccccccceEeeeehhcccc-cccccccccccccccceecceeeccccc
Confidence            9999999999999999999988763 6899999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431         242 EFKRKCR--------------SASDVGD----------------------------------------------------  255 (549)
Q Consensus       242 ~~~~~~~--------------~~~e~~K----------------------------------------------------  255 (549)
                      +|+.+++              .+||++|                                                    
T Consensus       239 ~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~  318 (602)
T PF00012_consen  239 KFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDDGEDFSITITREEFEELCEPLLERIIEPIEKA  318 (602)
T ss_dssp             HHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETTTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccccccccccccccc
Confidence            9987743              5677777                                                    


Q ss_pred             ------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEecccc
Q psy3431         256 ------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLS  318 (549)
Q Consensus       256 ------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~  318 (549)
                            +.++|+.|           ||+.|++.|+ ..+..++||++|||+|||++|+.+++  .++.+++.+.|++|++
T Consensus       319 l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~-~~~~~~~~p~~aVA~GAa~~a~~~~~--~~~~~~~~~~d~~~~~  395 (602)
T PF00012_consen  319 LKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFG-KKISKSVNPDEAVARGAALYAAILSG--SFRVKDIKIIDVTPFS  395 (602)
T ss_dssp             HHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTT-SEEB-SS-TTTHHHHHHHHHHHHHHT--SCSSTSSCESEBESSE
T ss_pred             cccccccccccceeEEecCcccchhhhhhhhhccc-cccccccccccccccccccchhhhcc--cccccccccccccccc
Confidence                  22333433           9999999996 77888999999999999999999998  6778889999999999


Q ss_pred             ceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEe
Q psy3431         319 LGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDL  398 (549)
Q Consensus       319 igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~  398 (549)
                      |||+..++.+.+++|+|+++|...+..|++..++|+.+.|.+|+|++....+|..||++.|.++++.+.|.++|+++|++
T Consensus       396 ~~i~~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~f~l  475 (602)
T PF00012_consen  396 IGIEVSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVTFEL  475 (602)
T ss_dssp             EEEEETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEEEEE
T ss_pred             ccccccccccccccccccccccccccccchhccccccccceeeeccccccccccccccccccccccccccccceeeEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCcc
Q psy3431         399 DANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKL  478 (549)
Q Consensus       399 d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~  478 (549)
                      |.||+|+|++.+..++....+++..... +++++++++.++++++...|+.++++.+++|+||+++|++|+.+++....+
T Consensus       476 d~~Gil~V~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~~~~~~~  554 (602)
T PF00012_consen  476 DENGILSVEAAEVETGKEEEVTVKKKET-LSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYIYELRDKLEEDKDFV  554 (602)
T ss_dssp             ETTSEEEEEEEETTTTEEEEEEEESSSS-SCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGS
T ss_pred             eeeeehhhhhcccccccccccccccccc-cccccccccccccchhhhhhhhhhhccccHHHHHHHHHHHHHHHHhhhccC
Confidence            9999999999999999888888887754 999999999999999999999999999999999999999999998766666


Q ss_pred             ChhHHHHHHHHHHHHHHHhhcC-CcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         479 TESEKSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       479 ~~~e~~~i~~~l~~~~~Wl~~~-~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      +++++   .+.+++..+||+++ .+++.++|++|+++|++..+||..|+++
T Consensus       555 ~~~~~---~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~~~~~i~~r~~~  602 (602)
T PF00012_consen  555 SEEEK---KKKLKETSDWLEDNGEDADKEEYKEKLEELKKVIEPIKKRYMQ  602 (602)
T ss_dssp             THHHH---HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CHHHH---HHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            66666   78899999999976 4678999999999999999999999864

Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....

>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.6e-81  Score=664.26  Aligned_cols=491  Identities=58%  Similarity=0.865  Sum_probs=456.6

Q ss_pred             CEEEEEcCccceEEEEEECC-eEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQG-KVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g-~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      .+|||||||||||||+++++ .+.++.|..|.|.+||+|+|..+ ++++|..|+.++..+|.++++.+||++|+.-.   
T Consensus         6 ~~iGIDlGTTNS~vA~~~~~~~~~vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~---   82 (579)
T COG0443           6 KAIGIDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN---   82 (579)
T ss_pred             eEEEEEcCCCcEEEEEEeCCCCceEecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC---
Confidence            48999999999999999988 79999999999999999999977 59999999999999999999999999998711   


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                                       ...+.+...|  +.++|+++++++|+++++.|+.+++..+.++|||||+||++.||+++++|+
T Consensus        83 -----------------~~~~~~~~~~--~~~~~eeisa~~L~~lk~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~  143 (579)
T COG0443          83 -----------------GLKISVEVDG--KKYTPEEISAMILTKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAA  143 (579)
T ss_pred             -----------------CCcceeeeCC--eeeCHHHHHHHHHHHHHHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHH
Confidence                             1112344455  789999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ++|||++++|++||+|||++|++...  .+.+|||||+||||||+|++++..| .++++++.||.++||++||.+|.+|+
T Consensus       144 ~iaGl~vlrlinEPtAAAlayg~~~~--~~~~vlV~DlGGGTfDvSll~~~~g-~~ev~at~gd~~LGGddfD~~l~~~~  220 (579)
T COG0443         144 RIAGLNVLRLINEPTAAALAYGLDKG--KEKTVLVYDLGGGTFDVSLLEIGDG-VFEVLATGGDNHLGGDDFDNALIDYL  220 (579)
T ss_pred             HHcCCCeEEEecchHHHHHHhHhccC--CCcEEEEEEcCCCCEEEEEEEEcCC-EEEEeecCCCcccCchhHHHHHHHHH
Confidence            99999999999999999999999976  7899999999999999999999988 99999999999999999999999999


Q ss_pred             HHHHHhccc--------------cccccCC--------------------------------------------------
Q psy3431         240 AEEFKRKCR--------------SASDVGD--------------------------------------------------  255 (549)
Q Consensus       240 ~~~~~~~~~--------------~~~e~~K--------------------------------------------------  255 (549)
                      .++|+.+.+              .+||++|                                                  
T Consensus       221 ~~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al  300 (579)
T COG0443         221 VMEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGDIDLLKELTRAKFEELILDLLERTIEPVEQAL  300 (579)
T ss_pred             HHHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988874              5677777                                                  


Q ss_pred             -----CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccc
Q psy3431         256 -----HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSL  319 (549)
Q Consensus       256 -----~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~i  319 (549)
                           +..+|+.|           |++.++++|+ +.+..++||||+||+|||++|+.+++    ..+++.+.|++|+++
T Consensus       301 ~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~-~~~~~~inpdeava~GAa~qa~~l~~----~~~d~ll~Dv~plsl  375 (579)
T COG0443         301 KDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFG-KEPEKSINPDEAVALGAAIQAAVLSG----EVPDVLLLDVIPLSL  375 (579)
T ss_pred             HHcCCChhhCceEEEccceeccHHHHHHHHHHhC-ccccccCCccHHHHHHHHHHHHhhcC----cccCceEEeeeeecc
Confidence                 33344444           9999999995 88899999999999999999999998    233889999999999


Q ss_pred             eEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeC
Q psy3431         320 GIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLD  399 (549)
Q Consensus       320 gi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d  399 (549)
                      |++..++.+.++|++|+.+|.++...|.+..|+|+.+.+++++|++....+|..+|.|.+.++|+.++|.++|+++|.+|
T Consensus       376 gie~~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD  455 (579)
T COG0443         376 GIETLGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDID  455 (579)
T ss_pred             ccccCcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccC
Q psy3431         400 ANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLT  479 (549)
Q Consensus       400 ~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~  479 (549)
                      .||++.|++.+..+|+...++|....+ |+++++++|.+....+.+.|+..++..+.+|..+++++.++..|.+.. .++
T Consensus       456 ~~gi~~v~a~~~~~~k~~~i~i~~~~~-ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~  533 (579)
T COG0443         456 ANGILNVTAKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALKEIV-KVS  533 (579)
T ss_pred             CCcceEeeeecccCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-cCC
Confidence            999999999999999999999999876 999999999999999999999999999999999999999999998766 788


Q ss_pred             hhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         480 ESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       480 ~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      +++++++.+.+.+++.||+. +   .++++.+.++|+...+++..++++
T Consensus       534 ~~~~~~~~~~~~~~~~~l~~-~---~~~~~~~~~~l~~~~~~~~~~~~~  578 (579)
T COG0443         534 EEEKEKIEEAITDLEEALEG-E---KEEIKAKIEELQEVTQKLAEKKYQ  578 (579)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999998 2   889999999999999999988764

>KOG0103|consensus

Probab=100.00  E-value=1.1e-81  Score=638.02  Aligned_cols=519  Identities=36%  Similarity=0.588  Sum_probs=468.2

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      |+|+|||||..||.+|+.+.+.+++|.|+.|+|.||++|+|.+..|++|.+|..+..+++.|++..+||++|+.|++|.+
T Consensus         1 msvvG~D~Gn~nc~iavAr~~gIe~i~nd~Snr~TPa~vsfg~K~R~~G~aak~~~~~n~kntv~~~KRl~Gr~f~dP~~   80 (727)
T KOG0103|consen    1 MSVVGFDLGNENCYIAVARQGGIEVVANDYSNRETPAIVSFGPKNRFIGVAAKNQQTTNVKNTVSNFKRLIGRKFSDPEV   80 (727)
T ss_pred             CCceeeeccccceeeeeeccCCceeeeeccccccCcceeeeccccceeeeccccceeecccccchhhhhhhccccCChHh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      |...+.+|+.++. .+|...+.+.|.|+.+.++|++|++|+|.+++..|+..+..++.+|||+||+||++.||+++.+||
T Consensus        81 q~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~~l~~~v~DcvIavP~~FTd~qRravldAA  160 (727)
T KOG0103|consen   81 QREIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEKNLKSPVSDCVIAVPSYFTDSQRRAVLDAA  160 (727)
T ss_pred             hhcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHHhcCCCCCCeeEeccccccHHHHHHHHhHH
Confidence            9999999999996 799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCC-----CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLK-----GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR  234 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~-----~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~  234 (549)
                      ++|||++++|++|.+|+|++||+.+..-     .+.+++++|+|++++.+|++.|..| .+.++++.+|.++||++||++
T Consensus       161 ~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~aF~kG-~lkvl~ta~D~~lGgr~fDe~  239 (727)
T KOG0103|consen  161 RIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAAFTKG-KLKVLATAFDRKLGGRDFDEA  239 (727)
T ss_pred             hhcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeeeeccC-cceeeeeecccccccchHHHH
Confidence            9999999999999999999999987532     4688999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHHHHHhccc--------------cccccCC---------------------------------------------
Q psy3431         235 LVSHLAEEFKRKCR--------------SASDVGD---------------------------------------------  255 (549)
Q Consensus       235 l~~~l~~~~~~~~~--------------~~~e~~K---------------------------------------------  255 (549)
                      |.+|++++|+.+++              .+||++|                                             
T Consensus       240 L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~rv~~p  319 (727)
T KOG0103|consen  240 LIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMNDKDVSSKIKREEFEELSAPLLERVEVP  319 (727)
T ss_pred             HHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeecchhhhhccHHHHHHHHHHHHHhhhHH
Confidence            99999999999987              5677777                                             


Q ss_pred             ----------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEe
Q psy3431         256 ----------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDV  314 (549)
Q Consensus       256 ----------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~  314 (549)
                                +.+||+.|           |++.|.++| ++.+.+++|.|||||+|||+++|++|+  .++++++.+.|+
T Consensus       320 ~~~~l~d~~l~~edi~~VEiVGg~sripaike~Is~~F-gke~s~TlN~dEavarG~ALqcAIlSP--~frVRef~v~Di  396 (727)
T KOG0103|consen  320 LLKALADAKLKVEDIHAVEIVGGLSRIPAIKEMISDFF-GKELSRTLNQDEAVARGAALQCAILSP--TFRVREFSVEDI  396 (727)
T ss_pred             HHHHHHHhcCccccceeEEEecCcccchHHHHHHHHHh-CCcccccccHHHHHHHhHHHHHHhcCc--cccceecceecc
Confidence                      44556555           999999999 789999999999999999999999999  899999999999


Q ss_pred             ccccceEEeeC-----CeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecC-cccccCCceeeEEEecCCCCCCCC
Q psy3431         315 TPLSLGIETAG-----GVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGE-RAMTKDNNLLGTFDLTGIPPAPRG  388 (549)
Q Consensus       315 ~~~~igi~~~~-----~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge-~~~~~~~~~ig~~~i~~i~~~~~g  388 (549)
                      .||+|.+.+..     +....+||+|.++|+++..+|...    ..|.+.++++. ..++.....|+++.+.++.+...|
T Consensus       397 ~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~Rk----~~F~lea~yt~~~~lp~~~~kI~~~~i~~v~~~~~g  472 (727)
T KOG0103|consen  397 VPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFNRK----GPFTLEAKYTKVNKLPYPKPKIEKWTITGVTPSEDG  472 (727)
T ss_pred             cceeEEEEeccccccCCCceeeecCCCCCCCceEEEEEec----CceEEEEEeccccccCCCCCceeeEEecccccCccc
Confidence            99999998652     455789999999999999999773    35889887776 456655678999999998876664


Q ss_pred             -CCeEEEEEEeCCCccEEEEEEec----------------------------CCCC----ceeEEEecC-CCCCCHHHHH
Q psy3431         389 -VPKIDVTFDLDANGILNVTAKDT----------------------------SSGK----SQNITIKND-KGRLSKEEID  434 (549)
Q Consensus       389 -~~~i~v~~~~d~~g~l~v~~~~~----------------------------~t~~----~~~i~i~~~-~~~ls~eei~  434 (549)
                       ..+++|...++.+|+++|...-.                            ..++    ...+++... .+.|+..+++
T Consensus       473 e~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~~l~  552 (727)
T KOG0103|consen  473 EFSKVKVKVRLNEHGIDTIESATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITDELE  552 (727)
T ss_pred             cccceeEEEEEcCccceeeecceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeeccccCHHHHH
Confidence             46799999999999999865310                            0011    112233322 2569999999


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhcc-CccChhHHHHHHHHHHHHHHHhhcC-CcCCHHHHHHHH
Q psy3431         435 RMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAG-NKLTESEKSRCREECDATLKWLDNN-TLADKEEYQDKL  512 (549)
Q Consensus       435 ~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~-~~~~~~e~~~i~~~l~~~~~Wl~~~-~~a~~~~~~~kl  512 (549)
                      ..++++.+|..+|+...++.+++|.||+|||.||++|.+.+ ++++++++++|...|+++++|||++ ++.+...|..||
T Consensus       553 ~~~e~E~~M~~qD~~~~Et~D~KNaleeyVY~~R~kl~~~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k~~Y~~kl  632 (727)
T KOG0103|consen  553 LYIEKENKMILQDKLEKETVDAKNALEEYVYDMRDKLSDKYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTKAVYVAKL  632 (727)
T ss_pred             HHHHHHHHhhhhhhhhhhhccHHHHHHHHHHHHHHHhhhhhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHH
Confidence            99999999999999999999999999999999999999888 8899999999999999999999965 689999999999


Q ss_pred             HHHHHHHHHHHHHHhcC
Q psy3431         513 QQLQKSCMPLMSKMHGG  529 (549)
Q Consensus       513 ~~L~~~~~~i~~r~~e~  529 (549)
                      .+|+..++  ..|+.+.
T Consensus       633 ~elk~~g~--~~r~~e~  647 (727)
T KOG0103|consen  633 EELKKLGD--KKRFDEN  647 (727)
T ss_pred             HHHHhhhh--hhhhhhh
Confidence            99999997  5565553

>KOG0104|consensus

Probab=100.00  E-value=3e-69  Score=548.15  Aligned_cols=517  Identities=30%  Similarity=0.476  Sum_probs=447.7

Q ss_pred             CEEEEEcCccceEEEEEECCeE-EEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKV-EIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~-~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      +|++||+||.+++||+.++|.| +|+.|..++|++|++|+|.+++|+||++|..+..++|++++.+++.|+|++..+|.+
T Consensus        23 AvmsVDlGse~~Kv~vVkPGvPmeIvLn~esrRKtp~~vafk~~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~~~~~~v  102 (902)
T KOG0104|consen   23 AVMSVDLGSEWIKVAVVKPGVPMEIVLNKESRRKTPSIVAFKGGERIFGEAAASMATRFPQSTYRQLKDLLGKSLDDPTV  102 (902)
T ss_pred             hheeeecccceeEEEEecCCCCeEEeechhhcccCcceEEecCCceehhhhhhhhhhcCcHHHHHHHHHHhCcccCCcHH
Confidence            6899999999999999999975 999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +.+.+++|+.-.. ++.+..+.+.+++ ...|++|+++||+|.+.+..|+.+...++.++|||||.||++.||+++.+||
T Consensus       103 ~ly~~~~p~~e~v~d~~rstV~F~i~d-~~~ysvEellAMil~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~all~Aa  181 (902)
T KOG0104|consen  103 DLYQKRFPFFELVEDPQRSTVVFKISD-QEEYSVEELLAMILQYAKSLAEEYAKQPIKDMVITVPPFFNQAERRALLQAA  181 (902)
T ss_pred             HHHHhcCCceeecccCccceEEEEeCC-ccccCHHHHHHHHHHHHHHHHHHHHhcchhheEEeCCcccCHHHHHHHHHHH
Confidence            9999999887664 4468888888777 4799999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCC---CCCceEEEEEcCCCceeeeEEEee------CC---cEEEEEEecCCCCCC
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNL---KGERNVLIFDLGGGTFDVSILSID------EG---ALFEVRSTAGDTHLG  227 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~---~~~~~vlv~D~Gggt~dvsv~~~~------~~---~~~~v~~~~~d~~lG  227 (549)
                      ++||++++.||+|.+||||.|++.+..   ..++++||||||+|++.++++.+.      .|   ..+++++.++|..||
T Consensus       182 ~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tLG  261 (902)
T KOG0104|consen  182 QIAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTLG  261 (902)
T ss_pred             HhcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCccc
Confidence            999999999999999999999998642   368999999999999999999984      11   379999999999999


Q ss_pred             cchHHHHHHHHHHHHHHhccc----------------cccccCC------------------------------------
Q psy3431         228 GEDFDNRLVSHLAEEFKRKCR----------------SASDVGD------------------------------------  255 (549)
Q Consensus       228 G~~iD~~l~~~l~~~~~~~~~----------------~~~e~~K------------------------------------  255 (549)
                      |..|..+|.+||.+.|.++++                ++++++|                                    
T Consensus       262 G~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~fEelc~  341 (902)
T KOG0104|consen  262 GLEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREEFEELCA  341 (902)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHHHHHHHH
Confidence            999999999999999998876                6677777                                    


Q ss_pred             -------------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcc
Q psy3431         256 -------------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSA  305 (549)
Q Consensus       256 -------------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~  305 (549)
                                         +.++|+.|           ||+.|.++.+..++.+++|+|||+++||+++||.||.  .|+
T Consensus       342 Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk--sFK  419 (902)
T KOG0104|consen  342 DLEERIVEPINDALKKAQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK--SFK  419 (902)
T ss_pred             HHHHhhhhhHHHHHHhcCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc--ccc
Confidence                               55666666           9999999999899999999999999999999999998  999


Q ss_pred             cceeEEEEeccccceEEeeCC--------eeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEE
Q psy3431         306 IQDVLLVDVTPLSLGIETAGG--------VMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTF  377 (549)
Q Consensus       306 ~~~~~~~d~~~~~igi~~~~~--------~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~  377 (549)
                      ++++.+.|.++|+|-++..+.        ....+|++|.++|..+.++|+.++|+   |.+.+-.|.-.     .-+-++
T Consensus       420 vKpf~V~D~~~yp~~v~f~~~~~i~~~k~~~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~~-----~nl~~v  491 (902)
T KOG0104|consen  420 VKPFNVVDASVYPYLVEFETEPGIHALKSVKRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDLG-----QNLTTV  491 (902)
T ss_pred             ccceeeeecccccEEEEeccCCcccccchhHHHHHhcCCcCCCcceeeccccCCc---cccccchhhhc-----cCccEE
Confidence            999999999999988875432        23458999999999998888877765   55554433210     123477


Q ss_pred             EecCCCCCC----C---CCCeEEEEEEeCCCccEEEEEEec------------------C---C----------------
Q psy3431         378 DLTGIPPAP----R---GVPKIDVTFDLDANGILNVTAKDT------------------S---S----------------  413 (549)
Q Consensus       378 ~i~~i~~~~----~---g~~~i~v~~~~d~~g~l~v~~~~~------------------~---t----------------  413 (549)
                      .+.|+....    .   ....|+++|.+|..|++.|+..+.                  +   |                
T Consensus       492 elsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sgi~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~a  571 (902)
T KOG0104|consen  492 ELSGVKDALKKNSYSDSESKGIKASFSLDLSGIVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEEDA  571 (902)
T ss_pred             EEecchHHHHhcccchhhccCceEEEEEcCcCceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhhh
Confidence            887776322    1   123589999999999999875320                  0   0                


Q ss_pred             -------CC--c------------------------------------eeEEEecCC---CCCCHHHHHHHHHHHHhhhh
Q psy3431         414 -------GK--S------------------------------------QNITIKNDK---GRLSKEEIDRMINDAERYKD  445 (549)
Q Consensus       414 -------~~--~------------------------------------~~i~i~~~~---~~ls~eei~~~~~~~~~~~~  445 (549)
                             ++  +                                    ..+.|....   +.|+...+.....+++.+..
T Consensus       572 e~k~~ep~e~se~~ee~~~d~s~e~k~e~~t~e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~~  651 (902)
T KOG0104|consen  572 EEKGLEPSERSELEEEAEEDASQEDKTEKETSEAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFVQ  651 (902)
T ss_pred             hhhccCccccccccccccccccccccccccchhccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHHH
Confidence                   00  0                                    013343332   35899999999999999999


Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHhhhcc--CccChhHHHHHHHHHHHHHHHhhcC-CcCCHHHHHHHHHHHHHHHHHH
Q psy3431         446 EDEKQKERISARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQKSCMPL  522 (549)
Q Consensus       446 ~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~--~~~~~~e~~~i~~~l~~~~~Wl~~~-~~a~~~~~~~kl~~L~~~~~~i  522 (549)
                      .|+.+.+++++.|.||.|+|++.++|++++  .+.+++|+..|.+.+..+.+||+++ .+..+.+|.+++.+|++++..+
T Consensus       652 ~e~~k~~re~a~N~LE~~l~e~q~~l~d~ey~e~at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~~l~~~~  731 (902)
T KOG0104|consen  652 KEKEKSEREEASNELEAFLFELQDKLDDDEYAEVATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELKKLETSK  731 (902)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCchHhhhcCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999998866  8899999999999999999999976 4689999999999999999999


Q ss_pred             HHHHhcC
Q psy3431         523 MSKMHGG  529 (549)
Q Consensus       523 ~~r~~e~  529 (549)
                      .+|..++
T Consensus       732 ~~R~ee~  738 (902)
T KOG0104|consen  732 NFREEER  738 (902)
T ss_pred             hHHHHHH
Confidence            9998765

>PRK11678 putative chaperone; Provisional

Probab=100.00  E-value=7.7e-44  Score=368.37  Aligned_cols=210  Identities=30%  Similarity=0.428  Sum_probs=183.1

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEe---------------------------------------
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT---------------------------------------   42 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~---------------------------------------   42 (549)
                      +++|||||||||+||++.+|++++++++.|++.+||+|+|.                                       
T Consensus         1 ~~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (450)
T PRK11678          1 MFIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDID   80 (450)
T ss_pred             CeEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhccccccc
Confidence            46899999999999999999999999999999999999994                                       


Q ss_pred             --CCceEEcHhhHHhhhcCCCch--HHHhHHhhCCCCCChHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHH
Q psy3431          43 --DTERLIGDAAKNQVAMNPRNT--VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISS  118 (549)
Q Consensus        43 --~~~~~~G~~A~~~~~~~~~~~--~~~~k~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~  118 (549)
                        ++..++|..|+.+...+|..+  +..+|++||...-.+                             .....++++++
T Consensus        81 ~~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~-----------------------------~~~~~~e~l~a  131 (450)
T PRK11678         81 VTAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP-----------------------------QQVALFEDLVC  131 (450)
T ss_pred             ccccccchhHHHHHhhccCCCCceEEecchhhhccCCCCc-----------------------------cceeCHHHHHH
Confidence              346789999999999999988  779999999752100                             02234899999


Q ss_pred             HHHHHHHHHHHHHhCCCcceEEEEecCCCC-----HHHHHH---HHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCc
Q psy3431         119 MVLTKMKETAEAYLGHSVRDAVITVPAYFN-----DAQRQA---TKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGER  190 (549)
Q Consensus       119 ~~L~~l~~~a~~~~~~~~~~~vitVPa~f~-----~~qr~~---l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~  190 (549)
                      ++|++|++.++.++|.++.++|||||++|+     +.||++   +++||+.|||++++|++||+|||++|+...  ..+.
T Consensus       132 ~iL~~lk~~ae~~~g~~v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~--~~~~  209 (450)
T PRK11678        132 AMMLHIKQQAEAQLQAAITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATL--TEEK  209 (450)
T ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhcccc--CCCC
Confidence            999999999999999999999999999998     778766   799999999999999999999999998653  3678


Q ss_pred             eEEEEEcCCCceeeeEEEeeCC------cEEEEEEecCCCCCCcchHHHHHH-HHHHHHH
Q psy3431         191 NVLIFDLGGGTFDVSILSIDEG------ALFEVRSTAGDTHLGGEDFDNRLV-SHLAEEF  243 (549)
Q Consensus       191 ~vlv~D~Gggt~dvsv~~~~~~------~~~~v~~~~~d~~lGG~~iD~~l~-~~l~~~~  243 (549)
                      .+||||+||||+|+|++++.++      ...+++++.| ..+||.+||.+|+ +++...|
T Consensus       210 ~vlV~D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~f  268 (450)
T PRK11678        210 RVLVVDIGGGTTDCSMLLMGPSWRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLL  268 (450)
T ss_pred             eEEEEEeCCCeEEEEEEEecCcccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHh
Confidence            9999999999999999998643      1468999998 6899999999997 5666555

>PRK13928 rod shape-determining protein Mbl; Provisional

Probab=99.97  E-value=6e-30  Score=259.05  Aligned_cols=240  Identities=25%  Similarity=0.367  Sum_probs=176.2

Q ss_pred             EEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC--c-eEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         4 vGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      +||||||+||+++..  ++..++.       .||+|+|..+  . ..+|.+|+.+..+.|.+....      +++.    
T Consensus         6 ~gIDlGt~~~~i~~~--~~~~v~~-------~psvv~~~~~~~~i~~vG~~A~~~~~~~p~~~~~~------~pi~----   66 (336)
T PRK13928          6 IGIDLGTANVLVYVK--GKGIVLN-------EPSVVAIDKNTNKVLAVGEEARRMVGRTPGNIVAI------RPLR----   66 (336)
T ss_pred             eEEEcccccEEEEEC--CCCEEEc-------cCCEEEEECCCCeEEEecHHHHHhhhcCCCCEEEE------ccCC----
Confidence            899999999999876  4334442       6999999964  2 468999988876666554310      1110    


Q ss_pred             HhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                                              +   -.+...+++..+|+++.+.+..........+|||||++|+..||+++++|++
T Consensus        67 ------------------------~---G~i~d~~~~~~~l~~~~~~~~~~~~~~~p~~vitvP~~~~~~~r~~~~~a~~  119 (336)
T PRK13928         67 ------------------------D---GVIADYDVTEKMLKYFINKACGKRFFSKPRIMICIPTGITSVEKRAVREAAE  119 (336)
T ss_pred             ------------------------C---CeEecHHHHHHHHHHHHHHHhccCCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence                                    0   1233445667777777755443222234479999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      .||++.+.+++||+|||++|+....  .+..++|||+||||||+++++...  .+    ..++..+||.+||+.|++++.
T Consensus       120 ~ag~~~~~li~ep~Aaa~~~g~~~~--~~~~~lVvDiGggttdvsvv~~g~--~~----~~~~~~lGG~did~~i~~~l~  191 (336)
T PRK13928        120 QAGAKKVYLIEEPLAAAIGAGLDIS--QPSGNMVVDIGGGTTDIAVLSLGG--IV----TSSSIKVAGDKFDEAIIRYIR  191 (336)
T ss_pred             HcCCCceEecccHHHHHHHcCCccc--CCCeEEEEEeCCCeEEEEEEEeCC--EE----EeCCcCCHHHHHHHHHHHHHH
Confidence            9999999999999999999988643  467799999999999999998632  22    345689999999999999988


Q ss_pred             HHHHhccc-cccccCC----------------------------------------------------------C-----
Q psy3431         241 EEFKRKCR-SASDVGD----------------------------------------------------------H-----  256 (549)
Q Consensus       241 ~~~~~~~~-~~~e~~K----------------------------------------------------------~-----  256 (549)
                      .+|+.... ..||++|                                                          .     
T Consensus       192 ~~~~~~~~~~~ae~lK~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~i~~~l~~~~~~~~  271 (336)
T PRK13928        192 KKYKLLIGERTAEEIKIKIGTAFPGAREEEMEIRGRDLVTGLPKTITVTSEEIREALKEPVSAIVQAVKSVLERTPPELS  271 (336)
T ss_pred             HHhchhcCHHHHHHHHHHhcccccccCCcEEEEecccccCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence            76643222 1222222                                                          0     


Q ss_pred             CCChH-HH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431         257 HGDAH-FV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL  298 (549)
Q Consensus       257 ~~~i~-~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l  298 (549)
                      .+.++ .|           |+++|++.| +.++....||+++||+|||+++..+
T Consensus       272 ~~~i~~~IvL~GG~s~ipgi~e~l~~~~-~~~v~~~~~P~~ava~Gaa~~~~~~  324 (336)
T PRK13928        272 ADIIDRGIIMTGGGALLHGLDKLLAEET-KVPVYIAEDPISCVALGTGKMLENI  324 (336)
T ss_pred             HhhcCCCEEEECcccchhhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhch
Confidence            11122 22           889999999 5677788899999999999998764

>PRK13929 rod-share determining protein MreBH; Provisional

Probab=99.97  E-value=1.2e-29  Score=255.89  Aligned_cols=187  Identities=29%  Similarity=0.486  Sum_probs=149.4

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-c--eEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-E--RLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~--~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      .+||||||+|+++  +.+++.. +.|      .||+|+|..+ .  ..+|.+|+.+..+.|.++...      +++.   
T Consensus         6 ~~giDlGt~~~~i--~~~~~~~-~~~------~ps~va~~~~~~~~~~vG~~A~~~~~~~p~~~~~~------~pi~---   67 (335)
T PRK13929          6 EIGIDLGTANILV--YSKNKGI-ILN------EPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAV------RPMK---   67 (335)
T ss_pred             eEEEEcccccEEE--EECCCcE-Eec------CCcEEEEECCCCeEEEeCHHHHHhhhcCCCcEEEE------ecCC---
Confidence            5899999999985  5556543 444      4999999855 2  579999999998888775442      1110   


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcc--eEEEEecCCCCHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVR--DAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~--~~vitVPa~f~~~qr~~l~~  157 (549)
                                               .|   .+..-++++.+|+++++.++..++..+.  .+|||||++|+..||+++.+
T Consensus        68 -------------------------~G---~I~d~d~~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~  119 (335)
T PRK13929         68 -------------------------DG---VIADYDMTTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISD  119 (335)
T ss_pred             -------------------------CC---ccCCHHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHH
Confidence                                     01   1223378899999999998888776553  79999999999999999999


Q ss_pred             HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHH
Q psy3431         158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS  237 (549)
Q Consensus       158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~  237 (549)
                      |++.||++.+.+++||+|||++|++...  .+..++|+|+||||+|++++++..  .+    ..++..+||.+||+.|.+
T Consensus       120 a~~~ag~~~~~li~ep~Aaa~~~g~~~~--~~~~~lvvDiG~gtt~v~vi~~~~--~~----~~~~~~~GG~~id~~l~~  191 (335)
T PRK13929        120 AVKNCGAKNVHLIEEPVAAAIGADLPVD--EPVANVVVDIGGGTTEVAIISFGG--VV----SCHSIRIGGDQLDEDIVS  191 (335)
T ss_pred             HHHHcCCCeeEeecCHHHHHHhcCCCcC--CCceEEEEEeCCCeEEEEEEEeCC--EE----EecCcCCHHHHHHHHHHH
Confidence            9999999999999999999999987643  567899999999999999998632  22    334578999999999999


Q ss_pred             HHHHHH
Q psy3431         238 HLAEEF  243 (549)
Q Consensus       238 ~l~~~~  243 (549)
                      ++.+.+
T Consensus       192 ~l~~~~  197 (335)
T PRK13929        192 FVRKKY  197 (335)
T ss_pred             HHHHHh
Confidence            987655

>TIGR00904 mreB cell shape determining protein, MreB/Mrl family

Probab=99.96  E-value=1.3e-27  Score=241.81  Aligned_cols=239  Identities=25%  Similarity=0.365  Sum_probs=166.5

Q ss_pred             EEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-----c--eEEcHhhHHhhhcCCCchHHHhHHhhCCCCC
Q psy3431           4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-----E--RLIGDAAKNQVAMNPRNTVFDAKRLIGRKFD   76 (549)
Q Consensus         4 vGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-----~--~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~   76 (549)
                      +||||||+||+++....|.  ++       ..||+|+|..+     .  ..+|++|+.++.+.|.+..  +++-+.    
T Consensus         5 ~giDlGt~~s~i~~~~~~~--~~-------~~psvv~~~~~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~~pi~----   69 (333)
T TIGR00904         5 IGIDLGTANTLVYVKGRGI--VL-------NEPSVVAIRTDRDAKTKSILAVGHEAKEMLGKTPGNIV--AIRPMK----   69 (333)
T ss_pred             eEEecCcceEEEEECCCCE--EE-------ecCCEEEEecCCCCCCCeEEEEhHHHHHhhhcCCCCEE--EEecCC----
Confidence            8999999999998754332  33       47999999843     3  6799999887666665532  111111    


Q ss_pred             ChHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHH
Q psy3431          77 DPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATK  156 (549)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~  156 (549)
                                                  +|  ..... +.+..+++++........+.....+|+|||++|+..||++++
T Consensus        70 ----------------------------~G--~i~d~-~~~~~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~  118 (333)
T TIGR00904        70 ----------------------------DG--VIADF-EVTEKMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRAVK  118 (333)
T ss_pred             ----------------------------CC--EEEcH-HHHHHHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHHHH
Confidence                                        01  11111 223334444443332211212238999999999999999999


Q ss_pred             HHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHH
Q psy3431         157 DAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV  236 (549)
Q Consensus       157 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~  236 (549)
                      +|++.||++.+.+++||+|||++|+....  .+..++|+|+||||+|++++++.+-      ...++..+||++||+.|.
T Consensus       119 ~~~~~ag~~~~~li~ep~aaa~~~g~~~~--~~~~~lVvDiG~gttdvs~v~~~~~------~~~~~~~lGG~did~~l~  190 (333)
T TIGR00904       119 ESALSAGAREVYLIEEPMAAAIGAGLPVE--EPTGSMVVDIGGGTTEVAVISLGGI------VVSRSIRVGGDEFDEAII  190 (333)
T ss_pred             HHHHHcCCCeEEEecCHHHHHHhcCCccc--CCceEEEEEcCCCeEEEEEEEeCCE------EecCCccchHHHHHHHHH
Confidence            99999999999999999999999987533  5677999999999999999987432      123456899999999999


Q ss_pred             HHHHHHHHhccc-cccccCC-----------------------------------------------------------C
Q psy3431         237 SHLAEEFKRKCR-SASDVGD-----------------------------------------------------------H  256 (549)
Q Consensus       237 ~~l~~~~~~~~~-~~~e~~K-----------------------------------------------------------~  256 (549)
                      +++.+++..... +.||++|                                                           .
T Consensus       191 ~~l~~~~~~~~~~~~ae~lK~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~  270 (333)
T TIGR00904       191 NYIRRTYNLLIGEQTAERIKIEIGSAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVNQIVEAVKRTLEKT  270 (333)
T ss_pred             HHHHHHhcccCCHHHHHHHHHHHhccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            998866532221 1222222                                                           0


Q ss_pred             ----CCChH--HH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHH
Q psy3431         257 ----HGDAH--FV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI  297 (549)
Q Consensus       257 ----~~~i~--~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~  297 (549)
                          ..++.  .|           +++.|++.| +.++....||+++||.||++++..
T Consensus       271 ~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~  327 (333)
T TIGR00904       271 PPELAADIVERGIVLTGGGALLRNLDKLLSKET-GLPVIVADDPLLCVAKGTGKALED  327 (333)
T ss_pred             CchhhhhhccCCEEEECcccchhhHHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence                00111  12           888898888 577888899999999999998754

A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.

>PRK13927 rod shape-determining protein MreB; Provisional

Probab=99.95  E-value=1.3e-26  Score=235.03  Aligned_cols=240  Identities=24%  Similarity=0.378  Sum_probs=167.1

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC---ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      .+||||||++++++..  |...++       .+||+|+|..+   ..++|.+|+.+..+.|.++...             
T Consensus         7 ~igIDlGt~~~~i~~~--~~~~~~-------~~ps~v~~~~~~~~~~~vG~~a~~~~~~~~~~~~~~-------------   64 (334)
T PRK13927          7 DLGIDLGTANTLVYVK--GKGIVL-------NEPSVVAIRTDTKKVLAVGEEAKQMLGRTPGNIVAI-------------   64 (334)
T ss_pred             eeEEEcCcceEEEEEC--CCcEEE-------ecCCEEEEECCCCeEEEecHHHHHHhhcCCCCEEEE-------------
Confidence            5899999999998543  332233       37999999855   2489999998877666553211             


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                             +|.    .          +|  ..... +.+..+|+++......... ....+|+|||++|++.||+++++|+
T Consensus        65 -------~pi----~----------~G--~i~d~-~~~~~ll~~~~~~~~~~~~-~~~~~vi~vP~~~~~~~r~~~~~a~  119 (334)
T PRK13927         65 -------RPM----K----------DG--VIADF-DVTEKMLKYFIKKVHKNFR-PSPRVVICVPSGITEVERRAVRESA  119 (334)
T ss_pred             -------ecC----C----------CC--eecCH-HHHHHHHHHHHHHHhhccC-CCCcEEEEeCCCCCHHHHHHHHHHH
Confidence                   011    0          01  11111 2334444444443322221 1237999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      +.||++.+.+++||+|||++|+....  .+..++|||+||||||++++++...      ...++..+||.+||+.|.+++
T Consensus       120 ~~ag~~~~~li~ep~aaa~~~g~~~~--~~~~~lvvDiGggttdvs~v~~~~~------~~~~~~~lGG~~id~~l~~~l  191 (334)
T PRK13927        120 LGAGAREVYLIEEPMAAAIGAGLPVT--EPTGSMVVDIGGGTTEVAVISLGGI------VYSKSVRVGGDKFDEAIINYV  191 (334)
T ss_pred             HHcCCCeeccCCChHHHHHHcCCccc--CCCeEEEEEeCCCeEEEEEEecCCe------EeeCCcCChHHHHHHHHHHHH
Confidence            99999999999999999999987543  4567899999999999999986432      133456899999999999999


Q ss_pred             HHHHHhccc-cccccCC----------------------------------------------------------CC---
Q psy3431         240 AEEFKRKCR-SASDVGD----------------------------------------------------------HH---  257 (549)
Q Consensus       240 ~~~~~~~~~-~~~e~~K----------------------------------------------------------~~---  257 (549)
                      .+++..... ..+|++|                                                          ..   
T Consensus       192 ~~~~~~~~~~~~ae~iK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~  271 (334)
T PRK13927        192 RRNYNLLIGERTAERIKIEIGSAYPGDEVLEMEVRGRDLVTGLPKTITISSNEIREALQEPLSAIVEAVKVALEQTPPEL  271 (334)
T ss_pred             HHHhCcCcCHHHHHHHHHHhhccCCCCCCceEEEeCcccCCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCchh
Confidence            866532221 1122221                                                          10   


Q ss_pred             -CCh-H-HH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431         258 -GDA-H-FV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL  298 (549)
Q Consensus       258 -~~i-~-~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l  298 (549)
                       .++ + .|           ++++|++.| +.++....||+++||+|||+++..+
T Consensus       272 ~~~~~~~~IvL~GG~s~ipgl~~~l~~~~-~~~v~~~~~P~~ava~Ga~~~~~~~  325 (334)
T PRK13927        272 AADIVDRGIVLTGGGALLRGLDKLLSEET-GLPVHVAEDPLTCVARGTGKALENI  325 (334)
T ss_pred             hhhhhcCCEEEECchhhhhHHHHHHHHHH-CCCcEecCCHHHHHHHHHHHHHhhH
Confidence             011 1 12           888899988 5678888999999999999998653

>PRK13930 rod shape-determining protein MreB; Provisional

Probab=99.94  E-value=8.2e-26  Score=229.45  Aligned_cols=188  Identities=28%  Similarity=0.456  Sum_probs=139.8

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC---ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      -+||||||++++++++..+ + ++       .+||+|++...   ..++|.+|+....+.|.+..  ++           
T Consensus        10 ~vgiDlGt~~t~i~~~~~~-~-~~-------~~ps~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~-----------   67 (335)
T PRK13930         10 DIGIDLGTANTLVYVKGKG-I-VL-------NEPSVVAIDTKTGKVLAVGEEAKEMLGRTPGNIE--AI-----------   67 (335)
T ss_pred             ceEEEcCCCcEEEEECCCC-E-EE-------ecCCEEEEECCCCeEEEEcHHHHHhhhcCCCCeE--Ee-----------
Confidence            3899999999999987333 2 32       25999999752   46899999887665554421  00           


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                             +|+    .          +|   .+..-+.+..+|+++.+.+..........+|+|+|++|+..+|+++.+|+
T Consensus        68 -------~pi----~----------~G---~i~d~~~~e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~~~  123 (335)
T PRK13930         68 -------RPL----K----------DG---VIADFEATEAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAA  123 (335)
T ss_pred             -------ecC----C----------CC---eEcCHHHHHHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence                   011    0          11   11122456777777776555444445678999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      +.+|++.+.+++||+|||++|+....  .....+|||+||||||++++....  .+    ..+...+||.+||+.|.+++
T Consensus       124 e~~g~~~~~lv~ep~AAa~a~g~~~~--~~~~~lVvDiG~gttdvs~v~~g~--~~----~~~~~~lGG~~id~~l~~~l  195 (335)
T PRK13930        124 EHAGAREVYLIEEPMAAAIGAGLPVT--EPVGNMVVDIGGGTTEVAVISLGG--IV----YSESIRVAGDEMDEAIVQYV  195 (335)
T ss_pred             HHcCCCeEEecccHHHHHHhcCCCcC--CCCceEEEEeCCCeEEEEEEEeCC--EE----eecCcCchhHHHHHHHHHHH
Confidence            99999999999999999999987543  345679999999999999997532  22    24558999999999999998


Q ss_pred             HHHHH
Q psy3431         240 AEEFK  244 (549)
Q Consensus       240 ~~~~~  244 (549)
                      .+++.
T Consensus       196 ~~~~~  200 (335)
T PRK13930        196 RRKYN  200 (335)
T ss_pred             HHHhC
Confidence            87653

>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes

Probab=99.93  E-value=5.1e-25  Score=217.02  Aligned_cols=238  Identities=27%  Similarity=0.407  Sum_probs=161.4

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC---ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      -+||||||+|+.|+.-..|.   +.      ..||+|++...   -..+|.+|+.+..+.|.+...              
T Consensus         3 ~igIDLGT~~t~i~~~~~Gi---v~------~epSvVA~~~~~~~i~avG~~A~~m~gktp~~i~~--------------   59 (326)
T PF06723_consen    3 DIGIDLGTSNTRIYVKGKGI---VL------NEPSVVAYDKDTGKILAVGDEAKAMLGKTPDNIEV--------------   59 (326)
T ss_dssp             EEEEEE-SSEEEEEETTTEE---EE------EEES-EEEETTT--EEEESHHHHTTTTS-GTTEEE--------------
T ss_pred             ceEEecCcccEEEEECCCCE---EE------ecCcEEEEECCCCeEEEEhHHHHHHhhcCCCccEE--------------
Confidence            58999999999995433332   22      34999999975   345899998877766655211              


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                            .+|..              +   -.+.--++...+|+++.+.+.......-..++|+||+.-++.+|+++.+|+
T Consensus        60 ------~~Pl~--------------~---GvI~D~~~~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~  116 (326)
T PF06723_consen   60 ------VRPLK--------------D---GVIADYEAAEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAA  116 (326)
T ss_dssp             ------E-SEE--------------T---TEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHH
T ss_pred             ------Ecccc--------------C---CcccCHHHHHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence                  01110              1   233345677788888887776543335567999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l  239 (549)
                      ..||.+.+.||+||.|||+..++.-  ..+...||+|+||||||++++..  |..+   .+.. ...||.+||++|.+|+
T Consensus       117 ~~aGa~~V~li~ep~AaAiGaGl~i--~~~~g~miVDIG~GtTdiavisl--ggiv---~s~s-i~~gG~~~DeaI~~~i  188 (326)
T PF06723_consen  117 RQAGARKVYLIEEPIAAAIGAGLDI--FEPRGSMIVDIGGGTTDIAVISL--GGIV---ASRS-IRIGGDDIDEAIIRYI  188 (326)
T ss_dssp             HHTT-SEEEEEEHHHHHHHHTT--T--TSSS-EEEEEE-SS-EEEEEEET--TEEE---EEEE-ES-SHHHHHHHHHHHH
T ss_pred             HHcCCCEEEEecchHHHHhcCCCCC--CCCCceEEEEECCCeEEEEEEEC--CCEE---EEEE-EEecCcchhHHHHHHH
Confidence            9999999999999999999988774  36788999999999999999974  4122   2222 5789999999999999


Q ss_pred             HHHHHhccc-cccccCC----------------------------------------------------------CCCC-
Q psy3431         240 AEEFKRKCR-SASDVGD----------------------------------------------------------HHGD-  259 (549)
Q Consensus       240 ~~~~~~~~~-~~~e~~K----------------------------------------------------------~~~~-  259 (549)
                      .++|+-..+ ..||++|                                                          ++.+ 
T Consensus       189 r~~y~l~Ig~~tAE~iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~i~~~Le~~pPel  268 (326)
T PF06723_consen  189 REKYNLLIGERTAEKIKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVEAIKEVLEKTPPEL  268 (326)
T ss_dssp             HHHHSEE--HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHH
T ss_pred             HHhhCcccCHHHHHHHHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            999965555 5566665                                                          1111 


Q ss_pred             hHHH----------------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHH
Q psy3431         260 AHFV----------------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA  295 (549)
Q Consensus       260 i~~V----------------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a  295 (549)
                      ..+|                +.++|++.+ +.++....||..+||.||....
T Consensus       269 ~~DI~~~GI~LtGGga~l~Gl~~~i~~~~-~~pV~va~~P~~~va~G~~~~l  319 (326)
T PF06723_consen  269 AADILENGIVLTGGGALLRGLDEYISEET-GVPVRVADDPLTAVARGAGKLL  319 (326)
T ss_dssp             HHHHHHH-EEEESGGGGSBTHHHHHHHHH-SS-EEE-SSTTTHHHHHHHHTT
T ss_pred             HHHHHHCCEEEEChhhhhccHHHHHHHHH-CCCEEEcCCHHHHHHHHHHHHH
Confidence            1111                788888888 6788899999999999998654

In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.

>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]

Probab=99.89  E-value=3.5e-22  Score=188.98  Aligned_cols=199  Identities=28%  Similarity=0.421  Sum_probs=148.5

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC--C---ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCC
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD--T---ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDD   77 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~--~---~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~   77 (549)
                      .+|||+||.|+.|..-  |+- +++      .-||+|++..  +   -..+|.+|+.+..+.|.+...-      |+.  
T Consensus         8 diGIDLGTanTlV~~k--~kg-IVl------~ePSVVAi~~~~~~~~v~aVG~eAK~MlGrTP~ni~ai------RPm--   70 (342)
T COG1077           8 DIGIDLGTANTLVYVK--GKG-IVL------NEPSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNIVAI------RPM--   70 (342)
T ss_pred             cceeeecccceEEEEc--Cce-EEe------cCceEEEEeecCCCceEEEehHHHHHHhccCCCCceEE------eec--
Confidence            6899999999999754  332 344      3499999987  3   3358999988877777663210      000  


Q ss_pred             hHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhC-CCcceEEEEecCCCCHHHHHHHH
Q psy3431          78 PKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLG-HSVRDAVITVPAYFNDAQRQATK  156 (549)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~-~~~~~~vitVPa~f~~~qr~~l~  156 (549)
                                                .+   -.+.--++...+|+|+.+......+ .....++++||..-++.+|+|++
T Consensus        71 --------------------------kd---GVIAd~~~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~  121 (342)
T COG1077          71 --------------------------KD---GVIADFEVTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIK  121 (342)
T ss_pred             --------------------------CC---cEeecHHHHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHH
Confidence                                      01   2344456677778888777664333 34557999999999999999999


Q ss_pred             HHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHH
Q psy3431         157 DAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV  236 (549)
Q Consensus       157 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~  236 (549)
                      +|++.||.+.+.+++||.|||+..++.-  ..+..-||||+||||+|++++.+.+     +..... ..+||+.||+.+.
T Consensus       122 ea~~~aGa~~V~lieEp~aAAIGaglpi--~ep~G~mvvDIGgGTTevaVISlgg-----iv~~~S-irv~GD~~De~Ii  193 (342)
T COG1077         122 EAAESAGAREVYLIEEPMAAAIGAGLPI--MEPTGSMVVDIGGGTTEVAVISLGG-----IVSSSS-VRVGGDKMDEAII  193 (342)
T ss_pred             HHHHhccCceEEEeccHHHHHhcCCCcc--cCCCCCEEEEeCCCceeEEEEEecC-----EEEEee-EEEecchhhHHHH
Confidence            9999999999999999999998876653  3566779999999999999998632     222222 6799999999999


Q ss_pred             HHHHHHHHhccc-cccccCC
Q psy3431         237 SHLAEEFKRKCR-SASDVGD  255 (549)
Q Consensus       237 ~~l~~~~~~~~~-~~~e~~K  255 (549)
                      +|+.++|+--.+ ..+|++|
T Consensus       194 ~yvr~~~nl~IGe~taE~iK  213 (342)
T COG1077         194 VYVRKKYNLLIGERTAEKIK  213 (342)
T ss_pred             HHHHHHhCeeecHHHHHHHH
Confidence            999999876655 4455544

>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein

Probab=99.87  E-value=2.9e-22  Score=191.67  Aligned_cols=165  Identities=22%  Similarity=0.311  Sum_probs=133.4

Q ss_pred             eeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCC
Q psy3431         110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGE  189 (549)
Q Consensus       110 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~  189 (549)
                      .+.--+.++++|+++++.++.+++.++.++|+|||++|++.||+++.+|++.||++++.+++||.|||++|+..      
T Consensus        35 ~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~~~~------  108 (239)
T TIGR02529        35 IVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVLQIK------  108 (239)
T ss_pred             eEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHhcCC------
Confidence            44456788999999999999999999999999999999999999999999999999999999999999998643      


Q ss_pred             ceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccccccccCC----CC--------
Q psy3431         190 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGD----HH--------  257 (549)
Q Consensus       190 ~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~~~~e~~K----~~--------  257 (549)
                       ..+|+|+||||+|+++++  .| .  +.. ..+..+||++||+.|.+++.-.+     .+||++|    +.        
T Consensus       109 -~~~vvDiGggtt~i~i~~--~G-~--i~~-~~~~~~GG~~it~~Ia~~~~i~~-----~~AE~~K~~~~~~~~~~~~i~  176 (239)
T TIGR02529       109 -NGAVVDVGGGTTGISILK--KG-K--VIY-SADEPTGGTHMSLVLAGAYGISF-----EEAEEYKRGHKDEEEIFPVVK  176 (239)
T ss_pred             -CcEEEEeCCCcEEEEEEE--CC-e--EEE-EEeeecchHHHHHHHHHHhCCCH-----HHHHHHHHhcCCHHHHHHHHH
Confidence             259999999999999975  34 2  222 33578999999999887654222     4555555    11        


Q ss_pred             ----------------CChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHH
Q psy3431         258 ----------------GDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAV  293 (549)
Q Consensus       258 ----------------~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~  293 (549)
                                      ..++.|           +++.+++.| +.++..+.||++++|+|||+
T Consensus       177 ~~~~~i~~~i~~~l~~~~~~~v~LtGG~a~ipgl~e~l~~~l-g~~v~~~~~P~~~va~Gaa~  238 (239)
T TIGR02529       177 PVYQKMASIVKRHIEGQGVKDLYLVGGACSFSGFADVFEKQL-GLNVIKPQHPLYVTPLGIAM  238 (239)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECchhcchhHHHHHHHHh-CCCcccCCCCCeehhheeec
Confidence                            111122           889999999 67788899999999999986

>PRK15080 ethanolamine utilization protein EutJ; Provisional

Probab=99.84  E-value=6.8e-20  Score=178.47  Aligned_cols=163  Identities=26%  Similarity=0.390  Sum_probs=131.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431         114 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL  193 (549)
Q Consensus       114 ~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl  193 (549)
                      -+.....|+++++.++.+++.++..++++||++|+..+|+++.+|++.||+++..+++||.|++.+|...       ..+
T Consensus        66 i~~a~~~i~~~~~~ae~~~g~~i~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~-------~~~  138 (267)
T PRK15080         66 FIGAVTIVRRLKATLEEKLGRELTHAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGID-------NGA  138 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcCeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCC-------CcE
Confidence            5667778999999999998988999999999999999999999999999999999999999999887543       158


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccccccccCC----CC------------
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGD----HH------------  257 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~~~~e~~K----~~------------  257 (549)
                      ++|+||||||++++.  ++ .+  ..+ .+..+||.+||+.|.+++.-.+     .+||++|    +.            
T Consensus       139 vvDIGggtt~i~v~~--~g-~~--~~~-~~~~~GG~~it~~Ia~~l~i~~-----~eAE~lK~~~~~~~~~~~ii~~~~~  207 (267)
T PRK15080        139 VVDIGGGTTGISILK--DG-KV--VYS-ADEPTGGTHMSLVLAGAYGISF-----EEAEQYKRDPKHHKEIFPVVKPVVE  207 (267)
T ss_pred             EEEeCCCcEEEEEEE--CC-eE--EEE-ecccCchHHHHHHHHHHhCCCH-----HHHHHHHhccCCHHHHHHHHHHHHH
Confidence            999999999999975  34 22  222 4679999999999998864322     4455555    11            


Q ss_pred             ------------CChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHH
Q psy3431         258 ------------GDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA  295 (549)
Q Consensus       258 ------------~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a  295 (549)
                                  ..++.|           +++.+++.| +.++..+.||+.++|+|||+++
T Consensus       208 ~i~~~i~~~l~~~~~~~IvLtGG~s~lpgl~e~l~~~l-g~~v~~~~~P~~~~a~Gaa~~~  267 (267)
T PRK15080        208 KMASIVARHIEGQDVEDIYLVGGTCCLPGFEEVFEKQT-GLPVHKPQHPLFVTPLGIALSC  267 (267)
T ss_pred             HHHHHHHHHHhcCCCCEEEEECCcccchhHHHHHHHHh-CCCcccCCCchHHHHHHHHhhC
Confidence                        122222           889999999 6778889999999999999875

>PRK09472 ftsA cell division protein FtsA; Reviewed

Probab=99.46  E-value=4.9e-12  Score=131.67  Aligned_cols=90  Identities=21%  Similarity=0.315  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcc
Q psy3431         150 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE  229 (549)
Q Consensus       150 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~  229 (549)
                      .++. +.+|++.|||++..++.||.|+|.++....  ..+..++++|+||||||+++++  +| .+.   ......+||.
T Consensus       167 ~~~~-~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~--e~~~gv~vvDiGggtTdisv~~--~G-~l~---~~~~i~~GG~  237 (420)
T PRK09472        167 MAKN-IVKAVERCGLKVDQLIFAGLASSYAVLTED--ERELGVCVVDIGGGTMDIAVYT--GG-ALR---HTKVIPYAGN  237 (420)
T ss_pred             HHHH-HHHHHHHcCCeEeeEEehhhHHHHHhcChh--hhhcCeEEEEeCCCceEEEEEE--CC-EEE---EEeeeechHH
Confidence            3444 457999999999999999999999886542  2467799999999999999996  34 221   1222679999


Q ss_pred             hHHHHHHHHH------HHHHHhccc
Q psy3431         230 DFDNRLVSHL------AEEFKRKCR  248 (549)
Q Consensus       230 ~iD~~l~~~l------~~~~~~~~~  248 (549)
                      +|++.|...|      +++++.+++
T Consensus       238 ~it~dIa~~l~i~~~~AE~lK~~~g  262 (420)
T PRK09472        238 VVTSDIAYAFGTPPSDAEAIKVRHG  262 (420)
T ss_pred             HHHHHHHHHhCcCHHHHHHHHHhcc
Confidence            9999998877      455554433

>TIGR01174 ftsA cell division protein FtsA

Probab=99.26  E-value=1.6e-10  Score=118.89  Aligned_cols=83  Identities=24%  Similarity=0.328  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCc
Q psy3431         149 DAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGG  228 (549)
Q Consensus       149 ~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG  228 (549)
                      ....+.+.+|++.||+++..++.||.|+|++|....  ..+..++|+|+||||+|++++.-  + ....   .....+||
T Consensus       157 ~~~v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~--~~~~~~~vvDiG~gtt~i~i~~~--g-~~~~---~~~i~~GG  228 (371)
T TIGR01174       157 STILRNLVKCVERCGLEVDNIVLSGLASAIAVLTED--EKELGVCLIDIGGGTTDIAVYTG--G-SIRY---TKVIPIGG  228 (371)
T ss_pred             HHHHHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcc--hhcCCEEEEEeCCCcEEEEEEEC--C-EEEE---EeeecchH
Confidence            445678889999999999999999999999885432  24567999999999999999863  4 2221   23367999


Q ss_pred             chHHHHHHHHH
Q psy3431         229 EDFDNRLVSHL  239 (549)
Q Consensus       229 ~~iD~~l~~~l  239 (549)
                      ++||+.|.+.+
T Consensus       229 ~~it~~i~~~l  239 (371)
T TIGR01174       229 NHITKDIAKAL  239 (371)
T ss_pred             HHHHHHHHHHh
Confidence            99999998765

This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.

>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]

Probab=99.24  E-value=3.4e-12  Score=112.46  Aligned_cols=108  Identities=30%  Similarity=0.450  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEc
Q psy3431         118 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL  197 (549)
Q Consensus       118 ~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~  197 (549)
                      -.+.+++++.+++.+|.+..+..=++|+.--+...+...+..+.||+.++.+++||||||.-.+++..       .|+|+
T Consensus        75 veiVrrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~dg-------~VVDi  147 (277)
T COG4820          75 VEIVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLDDG-------GVVDI  147 (277)
T ss_pred             HHHHHHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccCCC-------cEEEe
Confidence            34678899999999999999999999999877788888899999999999999999999965555433       79999


Q ss_pred             CCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHH
Q psy3431         198 GGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH  238 (549)
Q Consensus       198 Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~  238 (549)
                      ||||+-+|+++-  |   .|. +..|...||.++...|+-+
T Consensus       148 GGGTTGIsi~kk--G---kVi-y~ADEpTGGtHmtLvlAG~  182 (277)
T COG4820         148 GGGTTGISIVKK--G---KVI-YSADEPTGGTHMTLVLAGN  182 (277)
T ss_pred             CCCcceeEEEEc--C---cEE-EeccCCCCceeEEEEEecc
Confidence            999999999974  3   222 2345778888887666544

>smart00268 ACTIN Actin

Probab=99.14  E-value=1.1e-09  Score=112.90  Aligned_cols=177  Identities=18%  Similarity=0.220  Sum_probs=121.5

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC---------ceEEcHhhHHhhhcCCCchHHHhHHhhC
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT---------ERLIGDAAKNQVAMNPRNTVFDAKRLIG   72 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---------~~~~G~~A~~~~~~~~~~~~~~~k~llg   72 (549)
                      ++|.||+||.++++++..+..|.+        .+||+|+...+         ..++|.+|.....    ..         
T Consensus         2 ~~iviD~Gs~~~k~G~~~~~~P~~--------~~ps~v~~~~~~~~~~~~~~~~~~G~~a~~~~~----~~---------   60 (373)
T smart00268        2 PAIVIDNGSGTIKAGFAGEDEPQV--------VFPSIVGRPKDGKGMVGDAKDTFVGDEAQEKRG----GL---------   60 (373)
T ss_pred             CeEEEECCCCcEEEeeCCCCCCcE--------EccceeeEecccccccCCCcceEecchhhhcCC----Cc---------
Confidence            479999999999999886655533        35888776533         2356776632110    00         


Q ss_pred             CCCCChHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhC--CCcceEEEEecCCCCHH
Q psy3431          73 RKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLG--HSVRDAVITVPAYFNDA  150 (549)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~--~~~~~~vitVPa~f~~~  150 (549)
                                 .-.+|+.              +   ..+.--+.+..+++++...   .++  ..-..+++|+|...+..
T Consensus        61 -----------~~~~P~~--------------~---G~i~d~~~~e~i~~~~~~~---~l~~~~~~~~vll~~p~~~~~~  109 (373)
T smart00268       61 -----------ELKYPIE--------------H---GIVENWDDMEKIWDYTFFN---ELRVEPEEHPVLLTEPPMNPKS  109 (373)
T ss_pred             -----------eecCCCc--------------C---CEEeCHHHHHHHHHHHHhh---hcCCCCccCeeEEecCCCCCHH
Confidence                       0011211              1   1222345556667766653   222  23457899999999999


Q ss_pred             HHHHHHHHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcc
Q psy3431         151 QRQATKDAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE  229 (549)
Q Consensus       151 qr~~l~~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~  229 (549)
                      +|+.+.+.+- ..|++.+.++++|.+|+++++       ..+-+|+|+|+++++++.+.  +| .. +.....-..+||.
T Consensus       110 ~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~v~pv~--~G-~~-~~~~~~~~~~GG~  178 (373)
T smart00268      110 NREKILEIMFETFNFPALYIAIQAVLSLYASG-------RTTGLVIDSGDGVTHVVPVV--DG-YV-LPHAIKRIDIAGR  178 (373)
T ss_pred             HHHHHHHHhhccCCCCeEEEeccHHHHHHhCC-------CCEEEEEecCCCcceEEEEE--CC-EE-chhhheeccCcHH
Confidence            9999988875 679999999999999998875       45789999999999999886  34 21 2222223689999


Q ss_pred             hHHHHHHHHHHH
Q psy3431         230 DFDNRLVSHLAE  241 (549)
Q Consensus       230 ~iD~~l~~~l~~  241 (549)
                      ++|+.|.++|..
T Consensus       179 ~l~~~l~~~l~~  190 (373)
T smart00268      179 DLTDYLKELLSE  190 (373)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998876

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily

>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton

Probab=99.14  E-value=8.6e-10  Score=113.67  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHH-HHHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431         115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL  193 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl  193 (549)
                      +.+..+++++....-. .......+++++|..++..+|+.+.+. .+..|++.+.++++|.+|+++++.       .+-+
T Consensus        75 ~~~e~~~~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~l  146 (371)
T cd00012          75 DDMEKIWDHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGR-------TTGL  146 (371)
T ss_pred             HHHHHHHHHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCC-------CeEE
Confidence            3445566665543211 122356789999999998888888775 566899999999999999988864       5789


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                      |+|+|+++++++.+.-  | .. +........+||.++|+.|.+++..+.
T Consensus       147 VVDiG~~~t~i~pv~~--G-~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~  192 (371)
T cd00012         147 VVDSGDGVTHVVPVYD--G-YV-LPHAIKRLDLAGRDLTRYLKELLRERG  192 (371)
T ss_pred             EEECCCCeeEEEEEEC--C-EE-chhhheeccccHHHHHHHHHHHHHhcC
Confidence            9999999999988752  3 22 222223368999999999999886543

Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.

>PRK13917 plasmid segregation protein ParM; Provisional

Probab=99.09  E-value=2.4e-09  Score=108.31  Aligned_cols=156  Identities=15%  Similarity=0.140  Sum_probs=101.7

Q ss_pred             EEEEecCCCCHHH-HHHHHHHHHHc------------CCceeEeecchhHHHHhhhcccC------CCCCceEEEEEcCC
Q psy3431         139 AVITVPAYFNDAQ-RQATKDAGAIA------------GLNVMRIVNEPTAAALAYGLDKN------LKGERNVLIFDLGG  199 (549)
Q Consensus       139 ~vitVPa~f~~~q-r~~l~~Aa~~A------------Gl~~~~li~Ep~Aaal~y~~~~~------~~~~~~vlv~D~Gg  199 (549)
                      ++...|..+-..+ +..+++.....            -+..+.+++||.+|.+.+.....      ......++|+|+|+
T Consensus       115 l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~ilvIDIG~  194 (344)
T PRK13917        115 VATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVSVIDFGS  194 (344)
T ss_pred             EEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEEEEEcCC
Confidence            3458898774444 35666554321            12457889999999887766432      12456789999999


Q ss_pred             CceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHH-Hhccc-----ccccc-------------------C
Q psy3431         200 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF-KRKCR-----SASDV-------------------G  254 (549)
Q Consensus       200 gt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~-~~~~~-----~~~e~-------------------~  254 (549)
                      ||+|++++.  ++ .+. ...++....|..++.+.+.+++..+. .....     +..+.                   +
T Consensus       195 ~TtD~~v~~--~~-~~~-~~~s~s~~~G~~~~~~~I~~~i~~~~~~~~~~~~~ie~~l~~g~i~~~~~~~id~~~~~~~~  270 (344)
T PRK13917        195 GTTDLDTIQ--NL-KRV-EEESFVIPKGTIDVYKRIASHISKKEEGASITPYMLEKGLEYGACKLNQKTVIDFKDEFYKE  270 (344)
T ss_pred             CcEEEEEEe--Cc-EEc-ccccccccchHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHcCcEEeCCCceEehHHHHHHH
Confidence            999999986  33 332 23334477899999999999885332 11110     00000                   0


Q ss_pred             C----------------CCCChHHH---------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcC
Q psy3431         255 D----------------HHGDAHFV---------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG  300 (549)
Q Consensus       255 K----------------~~~~i~~V---------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~  300 (549)
                      .                ...+++.|         +++.|++.|+.  +....||..|-|+|...+|..+.+
T Consensus       271 ~~~~~~~i~~~i~~~~~~~~~~d~IiL~GGGA~ll~~~lk~~f~~--~~~~~~p~~ANa~G~~~~g~~~~~  339 (344)
T PRK13917        271 QDSVIDEVMSGFEIAVGNINSFDRVIVTGGGANIFFDSLSHWYSD--VEKADESQFANVRGYYKYGELLKN  339 (344)
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCEEEEECCcHHHHHHHHHHHcCC--eEEcCChHHHHHHHHHHHHHHHhc
Confidence            0                23344443         88999999964  355689999999999999987664

>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]

Probab=99.07  E-value=3.1e-09  Score=108.14  Aligned_cols=212  Identities=25%  Similarity=0.354  Sum_probs=122.1

Q ss_pred             EEEEEcCccceEEEEE--ECC-eEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVF--QQG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~--~~g-~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      ++|+|+||+..++.+.  .++ ...++.-    ...||- ... ++.+.--++..+..   +.++....+..|...++-.
T Consensus         8 iv~LDIGTskV~~lVge~~~~g~i~iig~----g~~~Sr-Gik-~G~I~di~~~~~sI---~~av~~AE~mag~~i~~v~   78 (418)
T COG0849           8 IVGLDIGTSKVKALVGELRPDGRLNIIGV----GSHPSR-GIK-KGVIVDLDAAAQSI---KKAVEAAERMAGCEIKSVI   78 (418)
T ss_pred             EEEEEccCcEEEEEEEEEcCCCeEEEEee----ecccCc-ccc-cceEEcHHHHHHHH---HHHHHHHHHhcCCCcceEE
Confidence            7999999999987764  444 4665532    122221 111 12333333322222   2445556666666643211


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCC------------
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYF------------  147 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f------------  147 (549)
                      +.-     +-... ........+.+.++ +.++.+++-     ++.+.|......+-..++=..|-.|            
T Consensus        79 vs~-----sG~~i-~s~~~~g~v~i~~~-~eIt~~DI~-----rvl~~A~~~~~~~~~~ilh~~p~~y~vD~~~~I~dP~  146 (418)
T COG0849          79 VSL-----SGNHI-KSQNVNGEVSISEE-KEITQEDIE-----RVLEAAKAVAIPPEREILHVIPQEYIVDGQEGIKDPL  146 (418)
T ss_pred             EEe-----cccee-EEEeeEEEEEcCCC-CccCHHHHH-----HHHHHHHhhccCCCceEEEEeeeEEEECCccccCCcc
Confidence            100     00000 00112223333443 566666665     3334443333222233333333333            


Q ss_pred             ----------------CHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeC
Q psy3431         148 ----------------NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDE  211 (549)
Q Consensus       148 ----------------~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~  211 (549)
                                      +..--+.+.+|.+.+|+++..++.+|-|+|.+.....  ..+-.++++|+||||||+++++-  
T Consensus       147 gm~G~rL~v~vhvit~~~~~~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~d--EkelGv~lIDiG~GTTdIai~~~--  222 (418)
T COG0849         147 GMSGVRLEVEVHVITGPKNILENLEKCVERAGLKVDNIVLEPLASALAVLTED--EKELGVALIDIGGGTTDIAIYKN--  222 (418)
T ss_pred             ccccceEEEEEEEEEcchHHHHHHHHHHHHhCCCeeeEEEehhhhhhhccCcc--cHhcCeEEEEeCCCcEEEEEEEC--
Confidence                            2234567888999999999999999999998776553  36788999999999999999963  


Q ss_pred             CcEEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         212 GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       212 ~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                      |   .+..+ +-..+||.+++..|..-|.-.+
T Consensus       223 G---~l~~~-~~ipvgG~~vT~DIa~~l~t~~  250 (418)
T COG0849         223 G---ALRYT-GVIPVGGDHVTKDIAKGLKTPF  250 (418)
T ss_pred             C---EEEEE-eeEeeCccHHHHHHHHHhCCCH
Confidence            4   22233 3378999999999998876444

>TIGR03739 PRTRC_D PRTRC system protein D

Probab=98.91  E-value=9.9e-09  Score=103.20  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=82.5

Q ss_pred             CcceEEEEecCCCCHHHHHHHHHHHHHc---------CCceeEeecchhHHHHhhhcccC--CCCCceEEEEEcCCCcee
Q psy3431         135 SVRDAVITVPAYFNDAQRQATKDAGAIA---------GLNVMRIVNEPTAAALAYGLDKN--LKGERNVLIFDLGGGTFD  203 (549)
Q Consensus       135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~A---------Gl~~~~li~Ep~Aaal~y~~~~~--~~~~~~vlv~D~Gggt~d  203 (549)
                      .+..+|+..|..+...+|..+++.....         -+..+.+++||.+|.+.+.....  ......++|+|+|++|+|
T Consensus       101 ~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~~~~~~~~~~lVIDIG~~TtD  180 (320)
T TIGR03739       101 EIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHGKLLTGKEQSLIIDPGYFTFD  180 (320)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCCCcccCcCcEEEEecCCCeee
Confidence            4567999999999888999998876532         34568899999999888765432  125677899999999999


Q ss_pred             eeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhc
Q psy3431         204 VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRK  246 (549)
Q Consensus       204 vsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~  246 (549)
                      +.++.  ++ .+ +...++....|-.++-+.+.+.+.+++...
T Consensus       181 ~~~~~--~~-~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~g~~  219 (320)
T TIGR03739       181 WLVAR--GM-RL-VQKRSGSVNGGMSDIYRLLAAEISKDIGTP  219 (320)
T ss_pred             eehcc--CC-EE-cccccCCchhHHHHHHHHHHHHHHhhcCCC
Confidence            98774  33 33 344555577899999999998888777654

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.

>PTZ00280 Actin-related protein 3; Provisional

Probab=98.78  E-value=3.9e-07  Score=95.12  Aligned_cols=123  Identities=17%  Similarity=0.084  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHc-CCceeEeecchhHHHHhhhcccCC---CCCc
Q psy3431         115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIA-GLNVMRIVNEPTAAALAYGLDKNL---KGER  190 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~A-Gl~~~~li~Ep~Aaal~y~~~~~~---~~~~  190 (549)
                      +.+..+++++....- .....-..+++|.|..++..+|+.+.+.+-.. +++.+.+..+|.++++++......   ....
T Consensus        82 d~~e~l~~~~~~~~L-~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g~~  160 (414)
T PTZ00280         82 DLMEKFWEQCIFKYL-RCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGGTL  160 (414)
T ss_pred             HHHHHHHHHHHHHhh-ccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCCce
Confidence            445556666543210 11222346899999999999999988877654 889999999999999876332111   0234


Q ss_pred             eEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         191 NVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       191 ~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                      +-||+|+|.++++++.+.-  | ..-..+. .-..+||.++++.|.++|.++
T Consensus       161 tglVVDiG~~~T~i~PV~~--G-~~l~~~~-~~~~~GG~~lt~~L~~lL~~~  208 (414)
T PTZ00280        161 TGTVIDSGDGVTHVIPVVD--G-YVIGSSI-KHIPLAGRDITNFIQQMLRER  208 (414)
T ss_pred             eEEEEECCCCceEEEEEEC--C-EEcccce-EEecCcHHHHHHHHHHHHHHc
Confidence            5699999999999987752  4 2211121 225799999999999988653

>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []

Probab=98.63  E-value=4.7e-08  Score=98.06  Aligned_cols=73  Identities=23%  Similarity=0.450  Sum_probs=50.8

Q ss_pred             CceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         164 LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       164 l~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      +..+.+++||.||.+.+...  ..+...+||+|+||+|+|++++.-  + .-.+....++..+|-..+-..+.+.|..
T Consensus       140 I~~V~V~PQ~~~A~~~~~~~--~~~~~~~lVVDIGG~T~Dv~~v~~--~-~~~~~~~~~~~~~Gvs~~~~~I~~~l~~  212 (318)
T PF06406_consen  140 IKDVEVFPQSVGAVFDALMD--LDEDESVLVVDIGGRTTDVAVVRG--G-LPDISKCSGTPEIGVSDLYDAIAQALRS  212 (318)
T ss_dssp             EEEEEEEESSHHHHHHHHHT--S-TTSEEEEEEE-SS-EEEEEEEG--G-G--EEEEEEETTSSTHHHHHHHHHHTT-
T ss_pred             EeeEEEEcccHHHHHHHHHh--hcccCcEEEEEcCCCeEEeeeecC--C-ccccchhccCCchhHHHHHHHHHHHHHH
Confidence            35688999999999887655  334578999999999999999862  2 2223344555688988888888777665

They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.

>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton

Probab=98.58  E-value=8.9e-07  Score=92.10  Aligned_cols=180  Identities=18%  Similarity=0.229  Sum_probs=112.6

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-----ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCC
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-----ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFD   76 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~   76 (549)
                      .+|-||+|+.++++++..+..|..        .+||++.....     ..++|..+...   .+...+            
T Consensus         5 ~~vViD~Gs~~~k~G~age~~P~~--------v~ps~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~------------   61 (393)
T PF00022_consen    5 KPVVIDNGSSTIKAGFAGEDLPRV--------VIPSVVGRPRDKNSSNDYYVGDEALSP---RSNLEL------------   61 (393)
T ss_dssp             SEEEEEECSSEEEEEETTSSS-SE--------EEESEEEEESSSSSSSSCEETHHHHHT---GTGEEE------------
T ss_pred             CEEEEECCCceEEEEECCCCCCCC--------cCCCccccccccccceeEEeecccccc---hhheee------------
Confidence            578999999999999976655532        35888776544     34677763221   000000            


Q ss_pred             ChHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHH
Q psy3431          77 DPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATK  156 (549)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~  156 (549)
                               ..|+              ..|   .+.--+.+..+++++.... -........++++.|..++..+|+.+.
T Consensus        62 ---------~~p~--------------~~g---~i~~~~~~e~i~~~~~~~~-l~~~~~~~~vll~~~~~~~~~~r~~l~  114 (393)
T PF00022_consen   62 ---------RSPI--------------ENG---VIVDWDALEEIWDYIFSNL-LKVDPSDHPVLLTEPPFNPRSQREKLA  114 (393)
T ss_dssp             ---------EESE--------------ETT---EESSHHHHHHHHHHHHHTT-T-SSGGGSEEEEEESTT--HHHHHHHH
T ss_pred             ---------eeec--------------ccc---ccccccccccccccccccc-cccccccceeeeeccccCCchhhhhhh
Confidence                     0011              011   2222344555666665432 112234557999999999999999877


Q ss_pred             HHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         157 DAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       157 ~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      +.+- ..|++.+.++++|.+|+++++..       +-+|+|+|.+.+.++.+.  +| .. +........+||.+++..|
T Consensus       115 e~lfE~~~~~~v~~~~~~~~a~~~~g~~-------tglVVD~G~~~t~v~pV~--dG-~~-~~~~~~~~~~GG~~lt~~l  183 (393)
T PF00022_consen  115 EILFEKFGVPSVYFIPSPLLALYASGRT-------TGLVVDIGYSSTSVVPVV--DG-YV-LPHSIKRSPIGGDDLTEYL  183 (393)
T ss_dssp             HHHHHTS--SEEEEEEHHHHHHHHTTBS-------SEEEEEESSS-EEEEEEE--TT-EE--GGGBEEES-SHHHHHHHH
T ss_pred             hhhhcccccceeeeeecccccccccccc-------cccccccceeeeeeeeee--ec-cc-cccccccccccHHHHHHHH
Confidence            7665 66999999999999999888654       459999999999888774  34 21 1122223679999999999


Q ss_pred             HHHHHHH
Q psy3431         236 VSHLAEE  242 (549)
Q Consensus       236 ~~~l~~~  242 (549)
                      .+.|.++
T Consensus       184 ~~lL~~~  190 (393)
T PF00022_consen  184 KELLKER  190 (393)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhh
Confidence            9988874

These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....

>PTZ00004 actin-2; Provisional

Probab=98.53  E-value=3e-06  Score=87.37  Aligned_cols=114  Identities=14%  Similarity=0.156  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHHh--CCCcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCce
Q psy3431         115 EISSMVLTKMKETAEAYL--GHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERN  191 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~--~~~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~  191 (549)
                      +....++.++..   ..+  ......+++|-|..++..+|+.+.+.+ +..+++.+.++++|.+++++++.       .+
T Consensus        81 d~~e~i~~~~~~---~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~-------~t  150 (378)
T PTZ00004         81 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGR-------TT  150 (378)
T ss_pred             HHHHHHHHHHHH---hhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCC-------ce
Confidence            444556666432   122  223456789999999999998876665 45799999999999999877643       45


Q ss_pred             EEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         192 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       192 vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                      -+|+|+|.+.++++.+.  +| .. +.......++||.++++.|.+.|..+
T Consensus       151 glVVDiG~~~t~v~pV~--dG-~~-l~~~~~~~~~GG~~lt~~L~~lL~~~  197 (378)
T PTZ00004        151 GIVLDSGDGVSHTVPIY--EG-YS-LPHAIHRLDVAGRDLTEYMMKILHER  197 (378)
T ss_pred             EEEEECCCCcEEEEEEE--CC-EE-eecceeeecccHHHHHHHHHHHHHhc
Confidence            69999999999998774  23 22 22222236799999999999987543

>PTZ00281 actin; Provisional

Probab=98.48  E-value=3.6e-06  Score=86.66  Aligned_cols=114  Identities=13%  Similarity=0.138  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEE
Q psy3431         116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLI  194 (549)
Q Consensus       116 v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv  194 (549)
                      .+..+++++.... -.....-..+++|-|..++..+|+.+.+.+ +..+++.+.+...|.+++++++.       .+-+|
T Consensus        82 ~~e~l~~~~f~~~-l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~-------~tglV  153 (376)
T PTZ00281         82 DMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIV  153 (376)
T ss_pred             HHHHHHHHHHHhh-ccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCC-------ceEEE
Confidence            3445555554311 012233457889999999999999988754 55788899999999999877653       46699


Q ss_pred             EEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         195 FDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       195 ~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      +|+|.+.+.++-+.-  |  +.+........+||.++++.|.+.|..
T Consensus       154 VDiG~~~t~v~PV~d--G--~~~~~~~~~~~~GG~~lt~~L~~lL~~  196 (376)
T PTZ00281        154 MDSGDGVSHTVPIYE--G--YALPHAILRLDLAGRDLTDYMMKILTE  196 (376)
T ss_pred             EECCCceEEEEEEEe--c--ccchhheeeccCcHHHHHHHHHHHHHh
Confidence            999999999875542  3  122222223679999999999987754

>PTZ00452 actin; Provisional

Probab=98.47  E-value=5.5e-06  Score=85.11  Aligned_cols=114  Identities=15%  Similarity=0.097  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEE
Q psy3431         116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLI  194 (549)
Q Consensus       116 v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv  194 (549)
                      .+..+++|+....- .....-..+++|-|...+..+|+.+.+.+- ..+++.+.+.+.|.+++++++.       .+-+|
T Consensus        81 ~~e~iw~~~f~~~l-~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~-------~tglV  152 (375)
T PTZ00452         81 DIEIIWHHAFYNEL-CMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGK-------TIGLV  152 (375)
T ss_pred             HHHHHHHHHHHhhc-CCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCC-------ceeee
Confidence            34456665532211 123344678999999999999999877664 4688888999999999877643       45699


Q ss_pred             EEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         195 FDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       195 ~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      +|+|.+.+.++-+.  +| .. +.....-..+||.++++.|.+.|.+
T Consensus       153 VDiG~~~t~v~PV~--dG-~~-l~~~~~r~~~gG~~lt~~L~~lL~~  195 (375)
T PTZ00452        153 VDSGEGVTHCVPVF--EG-HQ-IPQAITKINLAGRLCTDYLTQILQE  195 (375)
T ss_pred             ecCCCCcceEEEEE--CC-EE-eccceEEeeccchHHHHHHHHHHHh
Confidence            99999999988765  24 22 2222222579999999999887754

>PTZ00466 actin-like protein; Provisional

Probab=98.39  E-value=1.2e-05  Score=82.78  Aligned_cols=114  Identities=13%  Similarity=0.153  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431         115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL  193 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl  193 (549)
                      +.+..+++++.+..  .....-..+++|-|+.++..+|+.+.+.+ +..+++.+.+.++|.+++++++.       .+-+
T Consensus        87 d~~e~iw~~~f~~l--~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~-------~tgl  157 (380)
T PTZ00466         87 NDMENIWIHVYNSM--KINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGK-------TNGT  157 (380)
T ss_pred             HHHHHHHHHHHhhc--ccCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCC-------ceEE
Confidence            34445555554221  12223456889999999999999986655 45688889999999999877653       4679


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      |+|+|.+.+.++-+.  +| .. +........+||.++++-|.+.|.+
T Consensus       158 VVD~G~~~t~v~PV~--~G-~~-~~~~~~~~~~GG~~lt~~L~~lL~~  201 (380)
T PTZ00466        158 VLDCGDGVCHCVSIY--EG-YS-ITNTITRTDVAGRDITTYLGYLLRK  201 (380)
T ss_pred             EEeCCCCceEEEEEE--CC-EE-eecceeEecCchhHHHHHHHHHHHh
Confidence            999999999987664  24 22 2222223589999999999887753

>KOG0679|consensus

Probab=98.30  E-value=2.7e-05  Score=76.22  Aligned_cols=116  Identities=16%  Similarity=0.233  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431         115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL  193 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl  193 (549)
                      ++..++++|..+.-- ..+..-.-++||-|++=+.+.|+.+.+.+ +...++...|..+|+++|++-|       ..+-|
T Consensus        86 D~~~~~w~~~~~~~L-k~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~G-------rstal  157 (426)
T KOG0679|consen   86 DLFEMQWRYAYKNQL-KVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANG-------RSTAL  157 (426)
T ss_pred             HHHHHHHHHHHhhhh-hcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcC-------CCceE
Confidence            455666666653211 12333456899999988889998877655 5567788899999999987654       35679


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                      |+|+|+++|.++-+.  +| .+--.+... ..+||+.++..+.+.|..+
T Consensus       158 VvDiGa~~~svsPV~--DG-~Vlqk~vvk-s~laGdFl~~~~~q~l~~~  202 (426)
T KOG0679|consen  158 VVDIGATHTSVSPVH--DG-YVLQKGVVK-SPLAGDFLNDQCRQLLEPK  202 (426)
T ss_pred             EEEecCCCceeeeee--cc-eEeeeeeEe-cccchHHHHHHHHHHHhhc
Confidence            999999999998775  23 332233333 7899999999999888765

>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional

Probab=98.23  E-value=6.6e-06  Score=83.98  Aligned_cols=87  Identities=23%  Similarity=0.323  Sum_probs=58.1

Q ss_pred             cceEEEEecCCCCHHHHHHHHHHHH--------HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         136 VRDAVITVPAYFNDAQRQATKDAGA--------IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       136 ~~~~vitVPa~f~~~qr~~l~~Aa~--------~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      ..-.+||.+...-.+.++.+..+..        .||++...++. |-|++.+....   +.+..++++|+||||++++++
T Consensus        88 ~~ahIITg~~~~~~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse---Eke~gVa~IDIGgGTT~iaVf  163 (475)
T PRK10719         88 SGAVIITGETARKENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE---ERNTRVLNIDIGGGTANYALF  163 (475)
T ss_pred             ccEEEEEechhHHHHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh---hccCceEEEEeCCCceEEEEE
Confidence            3346888877655554444444222        26666666666 88888766532   467889999999999999999


Q ss_pred             EeeCCcEEEEEEecCCCCCCcchHH
Q psy3431         208 SIDEGALFEVRSTAGDTHLGGEDFD  232 (549)
Q Consensus       208 ~~~~~~~~~v~~~~~d~~lGG~~iD  232 (549)
                      .-  |   .+..+.. ..+||+.+.
T Consensus       164 ~~--G---~l~~T~~-l~vGG~~IT  182 (475)
T PRK10719        164 DA--G---KVIDTAC-LNVGGRLIE  182 (475)
T ss_pred             EC--C---EEEEEEE-EecccceEE
Confidence            73  4   2333333 778998875

>TIGR01175 pilM type IV pilus assembly protein PilM

Probab=98.17  E-value=2.5e-05  Score=79.85  Aligned_cols=85  Identities=16%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             CHHHHHHHHHHHHHcCCceeEeecchhHHHHhhh-----cccCCCCCc-eEEEEEcCCCceeeeEEEeeCCcEEEEEEec
Q psy3431         148 NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG-----LDKNLKGER-NVLIFDLGGGTFDVSILSIDEGALFEVRSTA  221 (549)
Q Consensus       148 ~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~-----~~~~~~~~~-~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~  221 (549)
                      .....+.+.++++.||++...+-.+|.|.+-.+.     +... .... .++++|+|+++++++++.-  | .+..   .
T Consensus       141 ~~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~~~-~~~~~~~~lvdiG~~~t~l~i~~~--g-~~~~---~  213 (348)
T TIGR01175       141 RKEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLASR-TYRLTDAALVDIGATSSTLNLLHP--G-RMLF---T  213 (348)
T ss_pred             cHHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCccc-cccCceEEEEEECCCcEEEEEEEC--C-eEEE---E
Confidence            3456788899999999999999999998876553     1111 2233 4999999999999999962  3 2211   1


Q ss_pred             CCCCCCcchHHHHHHHHH
Q psy3431         222 GDTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       222 ~d~~lGG~~iD~~l~~~l  239 (549)
                      ....+||.+|++.+.+.+
T Consensus       214 r~i~~G~~~i~~~i~~~~  231 (348)
T TIGR01175       214 REVPFGTRQLTSELSRAY  231 (348)
T ss_pred             EEeechHHHHHHHHHHHc
Confidence            226699999998886543

This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.

>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A

Probab=97.70  E-value=0.00021  Score=72.72  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcc-cCC---CCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCC
Q psy3431         149 DAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD-KNL---KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT  224 (549)
Q Consensus       149 ~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~-~~~---~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~  224 (549)
                      ...-....++++.|||++..+=-+|.|.+-.|... ...   .....++++|+|+.++.++++.  +| .+...   ...
T Consensus       135 k~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~--~g-~~~f~---R~i  208 (340)
T PF11104_consen  135 KEIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQ--NG-KPIFS---RSI  208 (340)
T ss_dssp             HHHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEE--TT-EEEEE---EEE
T ss_pred             HHHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEE--CC-EEEEE---EEE
Confidence            45567788999999999977755666655444332 111   1346799999999999999986  34 22211   125


Q ss_pred             CCCcchHHHHHHHHH
Q psy3431         225 HLGGEDFDNRLVSHL  239 (549)
Q Consensus       225 ~lGG~~iD~~l~~~l  239 (549)
                      .+||.++++.+.+.+
T Consensus       209 ~~G~~~l~~~i~~~~  223 (340)
T PF11104_consen  209 PIGGNDLTEAIAREL  223 (340)
T ss_dssp             S-SHHHHHHHHHHHT
T ss_pred             eeCHHHHHHHHHHhc
Confidence            799999999999886

>COG5277 Actin and related proteins [Cytoskeleton]

Probab=97.42  E-value=0.0026  Score=66.20  Aligned_cols=100  Identities=16%  Similarity=0.239  Sum_probs=71.5

Q ss_pred             CcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCc
Q psy3431         135 SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGA  213 (549)
Q Consensus       135 ~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~  213 (549)
                      .-..+++|-|..+...+|..+.+.+ +...++.+.+..++.+++++.+..     ..+.+|+|+|.+.|+++-+--  | 
T Consensus       105 ~~~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~-----~~~g~ViD~G~~~t~v~PV~D--G-  176 (444)
T COG5277         105 EEHPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSS-----DETGLVIDSGDSVTHVIPVVD--G-  176 (444)
T ss_pred             cCCceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCC-----CCceEEEEcCCCceeeEeeec--c-
Confidence            3457899999999999998766654 455666667777777666555432     257899999999999986642  2 


Q ss_pred             EEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         214 LFEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       214 ~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                       +.+.....-..+||++++..|.+.|....
T Consensus       177 -~~l~~a~~ri~~gG~~it~~l~~lL~~~~  205 (444)
T COG5277         177 -IVLPKAVKRIDIGGRDITDYLKKLLREKY  205 (444)
T ss_pred             -ccccccceeeecCcHHHHHHHHHHHhhcc
Confidence             22223333378999999999988887644

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative

Probab=97.31  E-value=0.0018  Score=62.67  Aligned_cols=66  Identities=17%  Similarity=0.180  Sum_probs=42.3

Q ss_pred             EeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         168 RIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       168 ~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      ..++|.+|-+.......+    ..=.|+|+||..+-+..++  +| .+.-.........|+-.|.+.+.+.|-
T Consensus        73 ~~~~ei~~~~~g~~~~~~----~~~~vidiGgqd~k~i~~~--~g-~~~~~~~n~~ca~Gtg~f~e~~a~~l~  138 (248)
T TIGR00241        73 KIVTEISCHGKGANYLAP----EARGVIDIGGQDSKVIKID--DG-KVDDFTMNDKCAAGTGRFLEVTARRLG  138 (248)
T ss_pred             CceEEhhHHHHHHHHHCC----CCCEEEEecCCeeEEEEEC--CC-cEeeeeecCcccccccHHHHHHHHHcC
Confidence            367888887654433322    2225999999988888776  55 333223344466788888888876654

This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.

>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon

Probab=97.13  E-value=0.0042  Score=63.87  Aligned_cols=88  Identities=25%  Similarity=0.306  Sum_probs=54.2

Q ss_pred             eEEEEecCCCCHHHHHHHHHHHHHcCCceeEee---cchhHHHHhhhccc-CCCCCceEEEEEcCCCceeeeEEEeeCCc
Q psy3431         138 DAVITVPAYFNDAQRQATKDAGAIAGLNVMRIV---NEPTAAALAYGLDK-NLKGERNVLIFDLGGGTFDVSILSIDEGA  213 (549)
Q Consensus       138 ~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li---~Ep~Aaal~y~~~~-~~~~~~~vlv~D~Gggt~dvsv~~~~~~~  213 (549)
                      -+.||==+.-.+++|..+..-+..||==++.--   -|..=|+-..|-.. ..+....|+=+|+||||+.+++++-  | 
T Consensus        87 AVIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~~~~V~NiDIGGGTtN~avf~~--G-  163 (473)
T PF06277_consen   87 AVIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEHHTVVANIDIGGGTTNIAVFDN--G-  163 (473)
T ss_pred             cEEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhhCCeEEEEEeCCCceeEEEEEC--C-
Confidence            356666666777888888888888872111100   12222221111111 1124677888999999999999973  4 


Q ss_pred             EEEEEEecCCCCCCcchH
Q psy3431         214 LFEVRSTAGDTHLGGEDF  231 (549)
Q Consensus       214 ~~~v~~~~~d~~lGG~~i  231 (549)
                        ++..+.. -++||+.|
T Consensus       164 --~v~~T~c-l~IGGRLi  178 (473)
T PF06277_consen  164 --EVIDTAC-LDIGGRLI  178 (473)
T ss_pred             --EEEEEEE-EeeccEEE
Confidence              5566665 78999876

The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.

>KOG0797|consensus

Probab=97.06  E-value=0.0075  Score=61.54  Aligned_cols=148  Identities=18%  Similarity=0.233  Sum_probs=100.7

Q ss_pred             eeeCHHHHHHHHHHHHHHHHHHHhCCCc-----ceEEEEecCCCCHHHHH-HHHHHHHHcCCceeEeecchhHHHHhhhc
Q psy3431         109 KTFAPEEISSMVLTKMKETAEAYLGHSV-----RDAVITVPAYFNDAQRQ-ATKDAGAIAGLNVMRIVNEPTAAALAYGL  182 (549)
Q Consensus       109 ~~~~~~~v~~~~L~~l~~~a~~~~~~~~-----~~~vitVPa~f~~~qr~-~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~  182 (549)
                      ...|..++++.+-+-+.-...+.++-+.     -.+|+.||-.|.....+ .+.-.....||+...++-|+.||.+..|+
T Consensus       195 ~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESlaatfGaGl  274 (618)
T KOG0797|consen  195 PYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESLAATFGAGL  274 (618)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhhHHHhcCCc
Confidence            5667788877766555555555565443     36899999999876654 44555667899999999999999876665


Q ss_pred             ccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc-cccccCCCCCChH
Q psy3431         183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR-SASDVGDHHGDAH  261 (549)
Q Consensus       183 ~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~-~~~e~~K~~~~i~  261 (549)
                      .       .-.|||+|+-++.++.|+-  |  +....+.--...||.||++.|+-++..   ..+. ..|.-   ...++
T Consensus       275 s-------s~CVVdiGAQkTsIaCVEd--G--vs~~ntri~L~YGGdDitr~f~~ll~r---s~FPy~d~~v---~~~~d  337 (618)
T KOG0797|consen  275 S-------SACVVDIGAQKTSIACVED--G--VSLPNTRIILPYGGDDITRCFLWLLRR---SGFPYQDCDV---LAPID  337 (618)
T ss_pred             c-------ceeEEEccCcceeEEEeec--C--ccccCceEEeccCCchHHHHHHHHHHh---cCCCcccccc---ccccc
Confidence            4       3489999999999888863  3  111122222568999999999876654   2222 33321   22455


Q ss_pred             HHHHHHHHhhhC
Q psy3431         262 FVVQSLLQNFFC  273 (549)
Q Consensus       262 ~Vi~~~l~~~f~  273 (549)
                      -.+-+.|++-|.
T Consensus       338 ~lLl~~LKe~Fc  349 (618)
T KOG0797|consen  338 WLLLNQLKEKFC  349 (618)
T ss_pred             HHHHHHHHHHhc
Confidence            557777888774

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit

Probab=96.75  E-value=0.11  Score=50.70  Aligned_cols=33  Identities=24%  Similarity=0.226  Sum_probs=26.5

Q ss_pred             HHHHHHhhhCCCCCC-CCCChhhHHHccHHHHHHH
Q psy3431         264 VQSLLQNFFCGKSLN-LSINPDEAVAYGAAVQAAI  297 (549)
Q Consensus       264 i~~~l~~~f~~~~~~-~~~~~~eava~Gaa~~a~~  297 (549)
                      +.+.+++.+ +.++. .+.+|..+-|+|||++|..
T Consensus       255 l~~al~~~L-g~~v~~~p~~p~~~GAlGAAL~A~~  288 (293)
T TIGR03192       255 VVKRIERIL-GIKAVDTKIDSQIAGALGAALFGYT  288 (293)
T ss_pred             HHHHHHHHh-CCCceeCCCCccHHHHHHHHHHHHH
Confidence            778888888 44554 5778999999999999964

Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.

>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function

Probab=96.74  E-value=0.017  Score=64.59  Aligned_cols=197  Identities=19%  Similarity=0.313  Sum_probs=114.4

Q ss_pred             EEcHhhHHhhhc----CCCchHHHhHHhh--------CCCCCChHHHhh----cccCCeE-EeecCCCceEEE-EEcC--
Q psy3431          47 LIGDAAKNQVAM----NPRNTVFDAKRLI--------GRKFDDPKIQQD----MKHWPFT-VVNDRSKPKIQV-EFKG--  106 (549)
Q Consensus        47 ~~G~~A~~~~~~----~~~~~~~~~k~ll--------g~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~v-~~~~--  106 (549)
                      -+|.+|...+..    .....+++.||+|        |..|+.......    ....|+. .+++.|.+-+.+ ....  
T Consensus       331 RVG~EA~RLa~~r~GtEg~TGlSSPKRYLWDe~~~~q~WRFn~~~~~~~~eP~ata~p~~~liN~~G~~L~~l~~~~~r~  410 (1002)
T PF07520_consen  331 RVGPEAARLASQRRGTEGSTGLSSPKRYLWDERPYEQGWRFNSAYVKSQNEPLATAAPFTNLINDDGQPLYQLDPEDERL  410 (1002)
T ss_pred             eecHHHHHHHHHhcCCccccCCCCchhhccCCCccCCCcccCCCCCCCccCchhhhHHHHHhhcccCcchhhhcCccccC
Confidence            378888776543    3445567777776        233332221110    0111221 224556554444 1111  


Q ss_pred             --ceeeeCHHHHHHHHHHHHHHHHHHHhCC--------------CcceEEEEecCCCCHHHHHHHHHHHHHc--------
Q psy3431         107 --ERKTFAPEEISSMVLTKMKETAEAYLGH--------------SVRDAVITVPAYFNDAQRQATKDAGAIA--------  162 (549)
Q Consensus       107 --~~~~~~~~~v~~~~L~~l~~~a~~~~~~--------------~~~~~vitVPa~f~~~qr~~l~~Aa~~A--------  162 (549)
                        -.-.||-.-++.++|..+.-+|-.+++.              ....+++|||......+|+.++++++.|        
T Consensus       411 pvf~p~ySRSSLMtfML~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~LvWk~l  490 (1002)
T PF07520_consen  411 PVFSPHYSRSSLMTFMLSEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIGLVWKAL  490 (1002)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence              1235677778888888888777666542              3568999999999999999999998877        


Q ss_pred             CCc---------------------eeEeecchhHHHHhhhcc------------------cCC---------CCCceEEE
Q psy3431         163 GLN---------------------VMRIVNEPTAAALAYGLD------------------KNL---------KGERNVLI  194 (549)
Q Consensus       163 Gl~---------------------~~~li~Ep~Aaal~y~~~------------------~~~---------~~~~~vlv  194 (549)
                      |..                     +..=-+|.||.=+-|.++                  +..         ...-+|.-
T Consensus       491 Gw~~~~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~slriAS  570 (1002)
T PF07520_consen  491 GWHPWDDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGPSLRIAS  570 (1002)
T ss_pred             CCCCCCCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCCceEEEE
Confidence            431                     111235666654444221                  111         12346888


Q ss_pred             EEcCCCceeeeEEEee----CCcEEEEE----EecCCCCCCcchHHHHH-HHHHHHHHH
Q psy3431         195 FDLGGGTFDVSILSID----EGALFEVR----STAGDTHLGGEDFDNRL-VSHLAEEFK  244 (549)
Q Consensus       195 ~D~Gggt~dvsv~~~~----~~~~~~v~----~~~~d~~lGG~~iD~~l-~~~l~~~~~  244 (549)
                      +|+||||||+.|-++.    .|....+.    -..| -.+.|+||=..+ ..++...+.
T Consensus       571 IDIGGGTTDL~It~Y~ld~G~g~nv~I~P~q~FReG-FkvAGDDiLldVI~~~VlPal~  628 (1002)
T PF07520_consen  571 IDIGGGTTDLMITQYRLDDGQGSNVKITPEQLFREG-FKVAGDDILLDVIQRIVLPALQ  628 (1002)
T ss_pred             EecCCCcceeeEEEEEeccCCcceeEECcchhhhhh-cccccHHHHHHHHHHHhHHHHH
Confidence            9999999999998886    33233332    2233 578888875544 444444443

It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15

Probab=96.67  E-value=0.082  Score=53.81  Aligned_cols=32  Identities=22%  Similarity=0.228  Sum_probs=27.2

Q ss_pred             HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHH
Q psy3431         264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA  296 (549)
Q Consensus       264 i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~  296 (549)
                      +.+.+++.+ +.++..+.+|..+-|+|||++|.
T Consensus       371 vv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~  402 (404)
T TIGR03286       371 LVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS  402 (404)
T ss_pred             HHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence            677778888 56788899999999999999884

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]

Probab=96.47  E-value=0.26  Score=49.16  Aligned_cols=33  Identities=24%  Similarity=0.261  Sum_probs=28.5

Q ss_pred             HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHH
Q psy3431         264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI  297 (549)
Q Consensus       264 i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~  297 (549)
                      +.+.+++.+ +.++..+.+|.-+-|+|||++|..
T Consensus       358 v~~ale~~l-g~~V~vP~~~ql~GAiGAAL~a~~  390 (396)
T COG1924         358 VVRALEDLL-GRKVIVPPYAQLMGAIGAALIAKE  390 (396)
T ss_pred             HHHHHHHHh-CCeeecCCccchhhHHHHHHHHhh
Confidence            677778888 678899999999999999999864

>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]

Probab=96.43  E-value=0.17  Score=53.43  Aligned_cols=57  Identities=21%  Similarity=0.313  Sum_probs=41.0

Q ss_pred             HHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431         153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI  209 (549)
Q Consensus       153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~  209 (549)
                      ..+..+-+..|+++--|=-|-+|=-.+.|..+..+.....+|+|+|||+|.+++..-
T Consensus        92 eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~~~lv~DIGGGStEl~~g~~  148 (492)
T COG0248          92 EFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKGDGLVIDIGGGSTELVLGDN  148 (492)
T ss_pred             HHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCCCEEEEEecCCeEEEEEecC
Confidence            457778888899874444455554444465555444788999999999999999973

>PRK10854 exopolyphosphatase; Provisional

Probab=96.03  E-value=0.11  Score=55.78  Aligned_cols=55  Identities=22%  Similarity=0.385  Sum_probs=38.3

Q ss_pred             HHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431         154 ATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSI  209 (549)
Q Consensus       154 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~  209 (549)
                      .+.++-+..|+++ .+|+..+=|.+.| |........+..+|+|+|||++.+++++-
T Consensus       101 fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~  156 (513)
T PRK10854        101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEN  156 (513)
T ss_pred             HHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhcccCCCCCeEEEEeCCCeEEEEEecC
Confidence            3445556679887 6676666565555 55444433457899999999999999863

>KOG0676|consensus

Probab=95.92  E-value=0.058  Score=54.45  Aligned_cols=110  Identities=19%  Similarity=0.263  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEc
Q psy3431         118 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL  197 (549)
Q Consensus       118 ~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~  197 (549)
                      ..+.+|+...-- .......-+++|=|..+....|+.+-+..-.. |++..+.-.- .|.+ |+..+     .+=+|+|+
T Consensus        82 e~iw~~if~~~L-~~~Pee~pvllte~pl~p~~nREk~tqi~FE~-fnvpa~yva~-qavl-ya~g~-----ttG~VvD~  152 (372)
T KOG0676|consen   82 EKIWHHLFYSEL-LVAPEEHPVLLTEPPLNPKANREKLTQIMFET-FNVPALYVAI-QAVL-YASGR-----TTGLVVDS  152 (372)
T ss_pred             HHHHHHHHHHhh-ccCcccCceEeecCCCCchHhHHHHHHHhhhh-cCccHhHHHH-HHHH-HHcCC-----eeEEEEEc
Confidence            555666652111 11123357899999999999999887765443 3443333222 3323 54432     35599999


Q ss_pred             CCCceeee-EEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         198 GGGTFDVS-ILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       198 Gggt~dvs-v~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      |.|-+++. +++   |  +.+........+||+++.+-|...|.+
T Consensus       153 G~gvt~~vPI~e---G--~~lp~ai~~ldl~G~dlt~~l~~~L~~  192 (372)
T KOG0676|consen  153 GDGVTHVVPIYE---G--YALPHAILRLDLAGRDLTDYLLKQLRK  192 (372)
T ss_pred             CCCceeeeeccc---c--cccchhhheecccchhhHHHHHHHHHh
Confidence            99977544 443   2  333333445789999999866666655

>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional

Probab=95.65  E-value=0.26  Score=52.75  Aligned_cols=56  Identities=23%  Similarity=0.413  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431         152 RQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILS  208 (549)
Q Consensus       152 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~  208 (549)
                      ...+.++-+..|+++ .+|+-.+=|-+.| |.....+..+..+|+|+|||++.+++++
T Consensus        94 ~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~  150 (496)
T PRK11031         94 DEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGT  150 (496)
T ss_pred             HHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhccCCCCCEEEEEecCCeeeEEEec
Confidence            344555666779987 6666665555554 5544443345689999999999999886

>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]

Probab=95.52  E-value=0.05  Score=51.76  Aligned_cols=50  Identities=28%  Similarity=0.312  Sum_probs=35.8

Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeC
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDE  211 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~  211 (549)
                      +..|.++..-=-|+.+|.+.......  .+..+.++|+||||+|.+++.-.+
T Consensus       106 ~~lgv~V~igGvEAemAi~GALTTPG--t~~PlaIlDmG~GSTDAsii~~~g  155 (332)
T PF08841_consen  106 EELGVPVEIGGVEAEMAILGALTTPG--TDKPLAILDMGGGSTDASIINRDG  155 (332)
T ss_dssp             HHHTSEEEEECEHHHHHHHHHTTSTT----SSEEEEEE-SSEEEEEEE-TTS
T ss_pred             HHHCCceEEccccHHHHHhcccCCCC--CCCCeEEEecCCCcccHHHhCCCC
Confidence            35577777777899999877655433  456789999999999999998544

This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.

>TIGR03706 exo_poly_only exopolyphosphatase

Probab=94.87  E-value=0.66  Score=46.21  Aligned_cols=76  Identities=22%  Similarity=0.321  Sum_probs=46.9

Q ss_pred             HHHHHHHH-HHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcc
Q psy3431         152 RQATKDAG-AIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE  229 (549)
Q Consensus       152 r~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~  229 (549)
                      +..+.+.. +..|++. ++|+..+=|.+.| +........ ..+++|+|||++.++.+.  ++......    .-++|..
T Consensus        87 ~~~~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~~~~~~-~~~v~DiGGGSte~~~~~--~~~~~~~~----Sl~lG~v  158 (300)
T TIGR03706        87 GPEFLREAEAILGLPI-EVISGEEEARLIYLGVAHTLPIA-DGLVVDIGGGSTELILGK--DFEPGEGV----SLPLGCV  158 (300)
T ss_pred             HHHHHHHHHHHHCCCe-EEeChHHHHHHHHHHHHhCCCCC-CcEEEEecCCeEEEEEec--CCCEeEEE----EEccceE
Confidence            34444444 4579877 6888877777666 333332222 349999999999999875  23122111    2567777


Q ss_pred             hHHHHH
Q psy3431         230 DFDNRL  235 (549)
Q Consensus       230 ~iD~~l  235 (549)
                      .+.+.+
T Consensus       159 rl~e~f  164 (300)
T TIGR03706       159 RLTEQF  164 (300)
T ss_pred             EhHHhh
Confidence            776654

It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.

>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=94.09  E-value=1.6  Score=42.99  Aligned_cols=83  Identities=18%  Similarity=0.210  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHcCCceeEeecchhHHHHhhhc--ccCCC--CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCC
Q psy3431         151 QRQATKDAGAIAGLNVMRIVNEPTAAALAYGL--DKNLK--GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHL  226 (549)
Q Consensus       151 qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~--~~~~~--~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~l  226 (549)
                      .-....+|.+.|||....+==|.-|.--+|..  .+...  ...+++|+|+|+..+.+.++.-...      -...+..+
T Consensus       150 ~v~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~~gk~------ly~r~~~~  223 (354)
T COG4972         150 VVESRIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQDGKI------LYTREVPV  223 (354)
T ss_pred             hhHHHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEECCee------eeEeeccC
Confidence            34566789999999886665566666555541  11111  2334799999999999999873221      22334789


Q ss_pred             CcchHHHHHHHHH
Q psy3431         227 GGEDFDNRLVSHL  239 (549)
Q Consensus       227 GG~~iD~~l~~~l  239 (549)
                      ||+.+.+.+.+.+
T Consensus       224 g~~Qlt~~i~r~~  236 (354)
T COG4972         224 GTDQLTQEIQRAY  236 (354)
T ss_pred             cHHHHHHHHHHHh
Confidence            9999998887654

>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D

Probab=93.79  E-value=3.2  Score=40.06  Aligned_cols=32  Identities=19%  Similarity=0.042  Sum_probs=23.1

Q ss_pred             HHHHHHhhhCCCC----CCCCCChhhHHHccHHHHH
Q psy3431         264 VQSLLQNFFCGKS----LNLSINPDEAVAYGAAVQA  295 (549)
Q Consensus       264 i~~~l~~~f~~~~----~~~~~~~~eava~Gaa~~a  295 (549)
                      +.+.+++.+++..    +..+.+|..+-|+|||++|
T Consensus       227 ~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~  262 (262)
T TIGR02261       227 LLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG  262 (262)
T ss_pred             HHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence            6777777774333    4456688899999999864

This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.

>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]

Probab=93.45  E-value=0.2  Score=48.76  Aligned_cols=37  Identities=38%  Similarity=0.597  Sum_probs=26.9

Q ss_pred             CceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchH
Q psy3431         189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF  231 (549)
Q Consensus       189 ~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~i  231 (549)
                      ...++=+|+||||+..|++..  |   ++..+.. ..+||+-+
T Consensus       144 ~t~v~NlDIGGGTtN~slFD~--G---kv~dTaC-LdiGGRLi  180 (473)
T COG4819         144 LTRVLNLDIGGGTTNYSLFDA--G---KVSDTAC-LDIGGRLI  180 (473)
T ss_pred             ceEEEEEeccCCccceeeecc--c---cccccee-eecCcEEE
Confidence            466788999999999999863  4   3444444 66888765

>smart00842 FtsA Cell division protein FtsA

Probab=93.41  E-value=0.75  Score=42.27  Aligned_cols=30  Identities=40%  Similarity=0.326  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHHHcCCceeEeecchhHHHHh
Q psy3431         150 AQRQATKDAGAIAGLNVMRIVNEPTAAALA  179 (549)
Q Consensus       150 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~  179 (549)
                      ...+.+.++++.|||++..++.+|-|++.+
T Consensus       157 ~~v~n~~~~v~~agl~v~~i~~~~~A~~~a  186 (187)
T smart00842      157 SAIQNLEKCVERAGLEVDGIVLEPLASAEA  186 (187)
T ss_pred             HHHHHHHHHHHHcCCchhhEEehhhhhEec
Confidence            467789999999999999999999998753

FtsA is essential for bacterial cell division, and co-localizes to the septal ring with FtsZ. It has been suggested that the interaction of FtsA-FtsZ has arisen through coevolution in different bacterial strains PUBMED:9352931.

>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]

Probab=92.19  E-value=1.2  Score=47.51  Aligned_cols=53  Identities=13%  Similarity=0.308  Sum_probs=38.2

Q ss_pred             eeCHHHHHHHHHHHHHHHHHHHhCC--------------CcceEEEEecCCCCHHHHHHHHHHHHHc
Q psy3431         110 TFAPEEISSMVLTKMKETAEAYLGH--------------SVRDAVITVPAYFNDAQRQATKDAGAIA  162 (549)
Q Consensus       110 ~~~~~~v~~~~L~~l~~~a~~~~~~--------------~~~~~vitVPa~f~~~qr~~l~~Aa~~A  162 (549)
                      .+|-.-++..+|..+...|-..++.              ....+++|+|+...-.+|+.+++-+..|
T Consensus       423 ~ySRSslmTfML~EilaqAl~qiNsp~tR~kl~~~~aPR~LRsiILTlPsAmPk~EreIfr~r~~eA  489 (1014)
T COG4457         423 CYSRSSLMTFMLSEILAQALSQINSPATRLKLRHKDAPRQLRSIILTLPSAMPKQEREIFRQRMEEA  489 (1014)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCHHHhhhhccCCchHhhhhheeeCCccCCchHHHHHHHHHHHH
Confidence            3455667777777777666555442              2457899999999999988887776665

>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]

Probab=92.18  E-value=1.1  Score=42.35  Aligned_cols=69  Identities=19%  Similarity=0.230  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHhCCCcceEEEEecCCCCHH-HHHHHHHHHHHcCCceeEeecchhHHHHhhhcccC--CCCCceEEEEEcC
Q psy3431         122 TKMKETAEAYLGHSVRDAVITVPAYFNDA-QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKN--LKGERNVLIFDLG  198 (549)
Q Consensus       122 ~~l~~~a~~~~~~~~~~~vitVPa~f~~~-qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~--~~~~~~vlv~D~G  198 (549)
                      .++++..+..++.++  .++++-..|... ..+..++.                |||-+.+..+-  -...+..+++|+|
T Consensus        77 e~Ii~~v~~Af~~pv--~~v~~~G~~~ssEa~~~~~~v----------------AAaNW~Ata~~~~e~~~dsci~VD~G  138 (330)
T COG1548          77 EDIIDTVEKAFNCPV--YVVDVNGNFLSSEALKNPREV----------------AAANWVATARFLAEEIKDSCILVDMG  138 (330)
T ss_pred             HHHHHHHHHhcCCce--EEEeccCcCcChhHhcCHHHH----------------HHhhhHHHHHHHHHhcCCceEEEecC
Confidence            456666777776665  688888888764 22212221                22221111110  0146779999999


Q ss_pred             CCceeeeEEE
Q psy3431         199 GGTFDVSILS  208 (549)
Q Consensus       199 ggt~dvsv~~  208 (549)
                      ..|+|+.-+.
T Consensus       139 STTtDIIPi~  148 (330)
T COG1548         139 STTTDIIPIK  148 (330)
T ss_pred             CcccceEeec
Confidence            9999987665

>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3

Probab=91.91  E-value=0.47  Score=46.84  Aligned_cols=109  Identities=21%  Similarity=0.403  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHhCCCcceE-EEEecCCCCHHHHHH-HHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEE
Q psy3431         117 SSMVLTKMKETAEAYLGHSVRDA-VITVPAYFNDAQRQA-TKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVL  193 (549)
Q Consensus       117 ~~~~L~~l~~~a~~~~~~~~~~~-vitVPa~f~~~qr~~-l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vl  193 (549)
                      +...|+..++.+..+   .+.++ +++.-|.=....+.. +...-+..|+++ .+|+..+=|.+.| +...........+
T Consensus        40 ~~~~L~~f~~~~~~~---~v~~i~~vATsA~R~A~N~~~~~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l~~~~~~l  115 (285)
T PF02541_consen   40 AIDALKRFKEILKDY---GVEKIRAVATSALREAKNSDEFLDRIKKETGIDI-EIISGEEEARLSFLGVLSSLPPDKNGL  115 (285)
T ss_dssp             HHHHHHHHHHHHHHT---TGSEEEEEEEHHHHHSTTHHHHHHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHSTTTSSEE
T ss_pred             HHHHHHHHHHHHHHC---CCCEEEEEhhHHHHhCcCHHHHHHHHHHHhCCce-EEecHHHHHHHHHHHHHhhccccCCEE
Confidence            344555555555543   33333 233222111112223 444445669887 5666665555544 3332223467789


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      ++|+|||++.+++++-  +......+    -++|.-.+.+.+
T Consensus       116 viDIGGGStEl~~~~~--~~~~~~~S----l~lG~vrl~e~~  151 (285)
T PF02541_consen  116 VIDIGGGSTELILFEN--GKVVFSQS----LPLGAVRLTERF  151 (285)
T ss_dssp             EEEEESSEEEEEEEET--TEEEEEEE----ES--HHHHHHHH
T ss_pred             EEEECCCceEEEEEEC--CeeeEeee----eehHHHHHHHHH
Confidence            9999999999998863  31222222    457766665443

6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.

>KOG0681|consensus

Probab=89.86  E-value=3.4  Score=43.31  Aligned_cols=99  Identities=11%  Similarity=0.069  Sum_probs=56.3

Q ss_pred             ceEEEEecCCCCHHHHHHHHHHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEE
Q psy3431         137 RDAVITVPAYFNDAQRQATKDAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF  215 (549)
Q Consensus       137 ~~~vitVPa~f~~~qr~~l~~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~  215 (549)
                      .-+++|=+..=...+|+.|.+..- ..|++.+.+=-+.-   ++|-++........-|++++|..+|.|-.+--  | ..
T Consensus       117 hPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDsl---fS~~hN~~~~~~~~~liis~g~~~T~vipvld--G-~~  190 (645)
T KOG0681|consen  117 HPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDSL---FSFYHNYGKSSNKSGLIISMGHSATHVIPVLD--G-RL  190 (645)
T ss_pred             CCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhhH---HHHhhccCcccCcceEEEecCCCcceeEEEec--C-ch
Confidence            346777777666677888776554 44776543211111   11111111123447899999999988876642  3 22


Q ss_pred             EEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         216 EVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       216 ~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                      .. ....-.++||...-.-|.+.+.-+
T Consensus       191 il-~~~kRiN~GG~qa~dYL~~Lmq~K  216 (645)
T KOG0681|consen  191 IL-KDVKRINWGGYQAGDYLSRLMQLK  216 (645)
T ss_pred             hh-hcceeeccCcchHHHHHHHHHhcc
Confidence            22 222337899998766555555544

>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination

Probab=87.43  E-value=0.57  Score=40.49  Aligned_cols=22  Identities=32%  Similarity=0.371  Sum_probs=19.1

Q ss_pred             CCEEEEEcCccceEEEEEECCe
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGK   22 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~   22 (549)
                      |.++|||+|+..+.+|+..+..
T Consensus         1 mriL~lD~G~kriGiAvsd~~~   22 (135)
T PF03652_consen    1 MRILGLDYGTKRIGIAVSDPLG   22 (135)
T ss_dssp             -EEEEEEECSSEEEEEEEETTT
T ss_pred             CeEEEEEeCCCeEEEEEecCCC
Confidence            8899999999999999987754

The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.

>PRK09557 fructokinase; Reviewed

Probab=87.07  E-value=5  Score=39.84  Aligned_cols=38  Identities=21%  Similarity=0.404  Sum_probs=25.7

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCC
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGG  200 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Ggg  200 (549)
                      .|++ +.+.|+..|+|++-.........++++++.+|.|
T Consensus        96 ~~~p-v~~~NDa~aaA~aE~~~g~~~~~~~~~~l~igtG  133 (301)
T PRK09557         96 LNRE-VRLANDANCLAVSEAVDGAAAGKQTVFAVIIGTG  133 (301)
T ss_pred             HCCC-EEEccchhHHHHHHHHhcccCCCCcEEEEEEccc
Confidence            3775 5799999999987644322234567777778744

>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3

Probab=86.61  E-value=0.43  Score=47.22  Aligned_cols=42  Identities=29%  Similarity=0.567  Sum_probs=25.8

Q ss_pred             ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431         165 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS  208 (549)
Q Consensus       165 ~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~  208 (549)
                      ++..+.+-|.|.+.....  .....++++++|+||.|||++++.
T Consensus        54 Pv~ti~SGPaas~~ga~~--~~~g~~~~i~vDmGGTTtDi~~i~   95 (290)
T PF01968_consen   54 PVETILSGPAASVIGAAA--RLTGLENAIVVDMGGTTTDIALIK   95 (290)
T ss_dssp             GGCTB--SSHHHHHHHHH----HT-SSEEEEEE-SS-EEEEEEE
T ss_pred             HHHHhhcCHHHhHhhhhh--hcCCCCCEEEEeCCCCEEEEEEEE
Confidence            445566777776654444  222456899999999999999986

5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.

>smart00732 YqgFc Likely ribonuclease with RNase H fold

Probab=86.55  E-value=0.63  Score=37.55  Aligned_cols=19  Identities=32%  Similarity=0.375  Sum_probs=17.4

Q ss_pred             CCEEEEEcCccceEEEEEE
Q psy3431           1 MPAIGIDLGTTYSCVAVFQ   19 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~   19 (549)
                      |.++|||+|.|++.+|+..
T Consensus         1 ~~ilgiD~Ggt~i~~a~~d   19 (99)
T smart00732        1 KRVLGLDPGRKGIGVAVVD   19 (99)
T ss_pred             CcEEEEccCCCeEEEEEEC
Confidence            7799999999999999874

YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.

>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=83.57  E-value=1.4  Score=48.57  Aligned_cols=42  Identities=31%  Similarity=0.564  Sum_probs=28.6

Q ss_pred             eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431         166 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS  208 (549)
Q Consensus       166 ~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~  208 (549)
                      +..+.+=|.|-.+..........+ +++++||||.|+|++++.
T Consensus       255 v~tI~SGPAagvvGAa~ltg~~~g-~~i~~DmGGTStDva~i~  296 (674)
T COG0145         255 VETILSGPAAGVVGAAYLTGLKAG-NAIVFDMGGTSTDVALII  296 (674)
T ss_pred             eeeEeeccHHHHHHHHHhcccccC-CEEEEEcCCcceeeeeee
Confidence            345666777665554433121223 699999999999999987

>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T

Probab=81.07  E-value=2.3  Score=35.82  Aligned_cols=52  Identities=13%  Similarity=0.263  Sum_probs=31.0

Q ss_pred             EEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCC--cchHH--HHHHHHHHHHH
Q psy3431         192 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG--GEDFD--NRLVSHLAEEF  243 (549)
Q Consensus       192 vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lG--G~~iD--~~l~~~l~~~~  243 (549)
                      ++++|+|++++.+.+++......++++..+.-+.-|  |..|.  +.+..-|..-+
T Consensus         1 i~~iDiGs~~~~~~i~~~~~~~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~~a~   56 (120)
T PF14450_consen    1 IVVIDIGSSKTKVAIAEDGSDGYIRVLGVGEVPSKGIKGGHITDIEDISKAIKIAI   56 (120)
T ss_dssp             EEEEEE-SSSEEEEEEETTEEEEEEEES----------HHHHH--HHHHHHHT--H
T ss_pred             CEEEEcCCCcEEEEEEEeCCCCcEEEEEEecccccccCCCEEEEHHHHHHHHHHHH
Confidence            578999999999999998443366666543222222  77777  77776666555

>COG5026 Hexokinase [Carbohydrate transport and metabolism]

Probab=80.21  E-value=13  Score=38.11  Aligned_cols=18  Identities=33%  Similarity=0.429  Sum_probs=15.9

Q ss_pred             CEEEEEcCccceEEEEEE
Q psy3431           2 PAIGIDLGTTYSCVAVFQ   19 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~   19 (549)
                      .++.||||.||.++++..
T Consensus        76 ~~LaiD~GGTnlRvc~V~   93 (466)
T COG5026          76 SVLAIDLGGTNLRVCLVV   93 (466)
T ss_pred             CEEEEecCCceEEEEEEE
Confidence            589999999999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	549
3jxu_A	409	Crystal Structure Of The Human 70kda Heat Shock Pro		1e-121
3jxu_A	409	Crystal Structure Of The Human 70kda Heat Shock Pro		4e-04
2e8a_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		1e-121
2e8a_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		3e-04
2e88_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		1e-121
2e88_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		3e-04
3a8y_A	392	Crystal Structure Of The Complex Between The Bag5 B		1e-121
3a8y_A	392	Crystal Structure Of The Complex Between The Bag5 B		3e-04
3d2f_B	382	Crystal Structure Of A Complex Of Sse1p And Hsp70 L		1e-121
1hjo_A	380	Atpase Domain Of Human Heat Shock 70kda Protein 1 L		1e-121
1s3x_A	382	The Crystal Structure Of The Human Hsp70 Atpase Dom		1e-121
3c7n_B	554	Structure Of The Hsp110:hsc70 Nucleotide Exchange C		1e-121
3c7n_B	554	Structure Of The Hsp110:hsc70 Nucleotide Exchange C		2e-83
3i33_A	404	Crystal Structure Of The Human 70kda Heat Shock Pro		1e-121
2qw9_B	394	Crystal Structure Of Bovine Hsc70 (1-394aa)in The A		1e-121
2qw9_B	394	Crystal Structure Of Bovine Hsc70 (1-394aa)in The A		1e-07
3cqx_A	386	Chaperone Complex Length = 386		1e-121
1hpm_A	386	How Potassium Affects The Activity Of The Molecular		1e-121
1hpm_A	386	How Potassium Affects The Activity Of The Molecular		4e-05
1hx1_A	400	Crystal Structure Of A Bag Domain In Complex With T		1e-120
3fzf_A	381	Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP		1e-120
1yuw_A	554	Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214		1e-120
1yuw_A	554	Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214		2e-83
1ngb_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1ngb_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1bup_A	386	T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot		1e-120
1bup_A	386	T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot		4e-05
1kaz_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71e		1e-120
2v7z_A	543	Crystal Structure Of The 70-Kda Heat Shock Cognate		1e-120
2v7z_A	543	Crystal Structure Of The 70-Kda Heat Shock Cognate		4e-80
1atr_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		1e-120
1atr_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		4e-05
1ngd_A	386	Structural Basis Of The 70-kilodalton Heat Shock Co		1e-120
1ngd_A	386	Structural Basis Of The 70-kilodalton Heat Shock Co		4e-05
1ngf_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1ngf_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1ngh_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1ngh_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1nga_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1nga_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1kay_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71a		1e-120
1ngg_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1ngg_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1ngc_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1ngc_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1nge_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		1e-120
1nge_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-05
1kax_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71m		1e-120
1ats_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		1e-120
1ats_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		4e-05
2bup_A	381	T13g Mutant Of The Atpase Fragment Of Bovine Hsc70		1e-120
1ba0_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		1e-120
1ba0_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		4e-05
1qqo_A	378	E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		1e-120
2qwn_A	394	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-119
2qwn_A	394	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-07
3gdq_A	408	Crystal Structure Of The Human 70kda Heat Shock Pro		1e-119
1ba1_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		1e-119
1ba1_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		4e-05
1qqm_A	378	D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		1e-119
1qqn_A	378	D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		1e-119
3d2e_B	382	Crystal Structure Of A Complex Of Sse1p And Hsp70,		1e-119
3fe1_A	403	Crystal Structure Of The Human 70kda Heat Shock Pro		1e-116
4fsv_A	387	Crystal Structure Of A Heat Shock 70kda Protein 2 (		1e-116
4fsv_A	387	Crystal Structure Of A Heat Shock 70kda Protein 2 (		7e-04
3kvg_A	400	Crystal Structure Of The N-Terminal Domain Of Hsp70		1e-107
3iuc_A	408	Crystal Structure Of The Human 70kda Heat Shock Pro		1e-102
3ldl_A	384	Crystal Structure Of Human Grp78 (70kda Heat Shock		1e-102
3qfp_A	390	Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D		3e-99
3qfu_A	394	Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE		3e-99
3gl1_A	387	Crystal Structure Of Atpase Domain Of Ssb1 Chaperon		4e-97
2kho_A	605	Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP		2e-75
2kho_A	605	Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP		1e-54
1dkg_D	383	Crystal Structure Of The Nucleotide Exchange Factor		7e-75
4b9q_A	605	Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L		3e-72
4b9q_A	605	Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L		3e-51
1ckr_A	159	High Resolution Solution Structure Of The Heat Shoc		4e-68
2v7y_A	509	Crystal Structure Of The Molecular Chaperone Dnak F		1e-65
2v7y_A	509	Crystal Structure Of The Molecular Chaperone Dnak F		4e-51
3dob_A	152	Peptide-Binding Domain Of Heat Shock 70 Kda Protein		5e-60
3h0x_A	152	Crystal Structure Of Peptide-Binding Domain Of Kar2		9e-55
2op6_A	152	Peptide-Binding Domain Of Heat Shock 70 Kda Protein		4e-50
3dpo_A	219	Crystal Structure Of The Substrate Binding Domain O		2e-49
1dkx_A	219	The Substrate Binding Domain Of Dnak In Complex Wit		3e-49
1dky_A	219	The Substrate Binding Domain Of Dnak In Complex Wit		4e-49
1bpr_A	191	Nmr Structure Of The Substrate Binding Domain Of Dn		4e-48
3n8e_A	182	Substrate Binding Domain Of The Human Heat Shock 70		5e-47
3dqg_A	151	Peptide-Binding Domain Of Heat Shock 70 Kda Protein		6e-46
3d2f_A	675	Crystal Structure Of A Complex Of Sse1p And Hsp70 L		3e-41
3c7n_A	668	Structure Of The Hsp110:hsc70 Nucleotide Exchange C		4e-41
2qxl_A	658	Crystal Structure Analysis Of Sse1, A Yeast Hsp110		4e-41
3d2e_A	675	Crystal Structure Of A Complex Of Sse1p And Hsp70,		6e-40
1q5l_A	135	Nmr Structure Of The Substrate Binding Domain Of Dn		1e-37
1dg4_A	115	Nmr Structure Of The Substrate Binding Domain Of Dn		8e-37
1u00_A	227	Hsca Substrate Binding Domain Complexed With The Is		3e-30
4gni_A	409	Structure Of The Ssz1 Atpase Bound To Atp And Magne		1e-26
1xqs_C	191	Crystal Structure Of The Hspbp1 Core Domain Complex		9e-26
3lof_A	113	C-Terminal Domain Of Human Heat Shock 70kda Protein		4e-13
2lmg_A	75	Solution Structure Of The C-Terminal Domain (537-61		8e-12
2p32_A	120	Crystal Structure Of The C-Terminal 10 Kda Subdomai		7e-09
1jcf_A	344	Mreb From Thermotoga Maritima, Trigonal Length = 34		2e-08
1ud0_A	113	Crystal Structure Of The C-Terminal 10-Kda Subdomai		9e-08
1jce_A	344	Mreb From Thermotoga Maritima Length = 344		7e-07

>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409

Iteration: 1
 Score =  432 bits (1112), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 28  AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 87
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 88  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 147
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 148 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 207
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 208 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 266
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 267 FKRKHK 272

>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           VQ LLQ+FF G+ LN SINPDE           IL GD+S
Sbjct: 368 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKS 407

>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391

Iteration: 1
 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 9   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 68
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 69  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 128
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 129 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 188
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 189 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 247
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 248 FKRKHK 253

>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
           VQ LLQ+FF G+ LN SINPDE           IL GD+S  +
Sbjct: 349 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391

>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391

Iteration: 1
 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 9   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 68
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 69  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 128
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 129 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 188
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 189 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 247
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 248 FKRKHK 253

>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
           VQ LLQ+FF G+ LN SINPDE           IL GD+S  +
Sbjct: 349 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391

>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392

Iteration: 1
 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 10  AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 69
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 70  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 129
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 130 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 190 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 248
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 249 FKRKHK 254

>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
           VQ LLQ+FF G+ LN SINPDE           IL GD+S  +
Sbjct: 350 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 392

>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382

Iteration: 1
 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 66  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 245 FKRKHK 250

>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380

Iteration: 1
 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 63
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 64  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 123
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 124 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 183
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 184 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 242
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 243 FKRKHK 248

>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382

Iteration: 1
 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSC+ VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6   AIGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q DMKHWPF V+ND  KPK+QV +KGE K F PEEISSMVLT
Sbjct: 66  TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 245 FKRKHK 250

>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554

Iteration: 1
 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554

Iteration: 1
 Score =  306 bits (784), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/209 (68%), Positives = 175/209 (83%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
           +Q LLQ+FF GK LN SINPDE           ILSGD+S  +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
           AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGILNV+A D S+GK   ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALD 472
           K EDEKQ++++S++N+LE+Y FN+K  ++
Sbjct: 526 KAEDEKQRDKVSSKNSLESYAFNMKATVE 554

>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404

Iteration: 1
 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/256 (81%), Positives = 228/256 (89%), Gaps = 5/256 (1%)
Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 23  MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 82
Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NT+FDAKRLIGRKF+D  +Q DMKHWPF VV++  KPK+QVE+KGE KTF PEEISSMV
Sbjct: 83  TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMV 142
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMKE AEAYLG  V  AVITVPAYFND+QRQATKDAG I GLNV+RI+NEPTAAA+AY
Sbjct: 143 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY 202
Query: 181 GLDKN--LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
           GLDK     GE+NVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+VSH
Sbjct: 203 GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSH 261
Query: 239 LAEEFKRKCRSASDVG 254
           LAEEFKRK +   D+G
Sbjct: 262 LAEEFKRKHK--KDIG 275

>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394

Iteration: 1
 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|3CQX|A Chain A, Chaperone Complex Length = 386

Iteration: 1
 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 10  PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 69
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 70  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 129
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 130 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 189
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 190 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 248
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 249 EFKRKHK 255

>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386

Iteration: 1
 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400

Iteration: 1
 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 24  PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 83
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 84  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 143
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 144 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 203
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 204 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 262
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 263 EFKRKHK 269

>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381

Iteration: 1
 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554

Iteration: 1
 Score =  429 bits (1104), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 222/247 (89%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I  G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554

Iteration: 1
 Score =  306 bits (784), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/209 (68%), Positives = 175/209 (83%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
           +Q LLQ+FF GK LN SINPDE           ILSGD+S  +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
           AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGILNV+A D S+GK   ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALD 472
           K EDEKQ++++S++N+LE+Y FN+K  ++
Sbjct: 526 KAEDEKQRDKVSSKNSLESYAFNMKATVE 554

>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  429 bits (1104), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N+PTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386

Iteration: 1
 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLG+TYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381

Iteration: 1
 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDA+RLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543

Iteration: 1
 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 198/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQA KDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK ++ ERNVLIFDLGGGTFDVSIL+ ++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVRAERNVLIFDLGGGTFDVSILTTEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543

Iteration: 1
 Score =  295 bits (756), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 140/198 (70%), Positives = 167/198 (84%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
           +Q LLQ+FF GK LN SINPDE           ILSGD+S  +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
           AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
           PAPRGVP+I+VTFD+DANGILNV+A D S+GK   ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLE 461
           K EDEKQ++++S++N+LE
Sbjct: 526 KAEDEKQRDKVSSKNSLE 543

>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGG FDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGVFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTF+VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFNVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIF+LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFNLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GI+LGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N PTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381

Iteration: 1
 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDA RLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GI LGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFSVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIF LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFSLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381

Iteration: 1
 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDA RLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGG FDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGEFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381

Iteration: 1
 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLG TYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386

Iteration: 1
 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFKVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 2   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N PTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 241 EFKRKHK 247

>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394

Iteration: 1
 Score =  427 bits (1097), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+ I+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLV 312
           +Q LLQ+FF GK LN SINPDE           ILSGD+S  +QD+LL+
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394

>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408

Iteration: 1
 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 30  AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQN 89
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF+DP +Q DMK WPF V+N+  KPK+ V +KGE K F PEEISSMVLT
Sbjct: 90  TVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISSMVLT 149
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+KETAEA+LGH V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 150 KLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 209
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           DK  +GER+VLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLVSH  EE
Sbjct: 210 DKGGQGERHVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVSHFVEE 268
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 269 FKRKHK 274

>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386

Iteration: 1
 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYS V VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
           EFKRK +
Sbjct: 244 EFKRKHK 250

>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
           +Q LLQ+FF GK LN SINPDE           ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385

>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 198/244 (81%), Positives = 220/244 (90%), Gaps = 1/244 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 2   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND   PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIF LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 182 LDKAVGAERNVLIFSLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKR 245
           EFKR
Sbjct: 241 EFKR 244

>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  424 bits (1090), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 198/244 (81%), Positives = 219/244 (89%), Gaps = 1/244 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 2   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR FDD  +Q DMKHWPF VVND   PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62  NTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK +  ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFSVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKR 245
           EFKR
Sbjct: 241 EFKR 244

>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382

Iteration: 1
 Score =  424 bits (1090), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/246 (81%), Positives = 221/246 (89%), Gaps = 1/246 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6   AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF DP +Q D KHWPF V+ND  KPK+QV +KGE K F PEEISS VLT
Sbjct: 66  TVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSXVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K KE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
           FKRK +
Sbjct: 245 FKRKHK 250

>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403

Iteration: 1
 Score =  417 bits (1071), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/244 (79%), Positives = 221/244 (90%), Gaps = 1/244 (0%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           A+GIDLGTTYSCV VFQQG+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP N
Sbjct: 26  AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHN 85
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGRKF D  +Q DMKHWPF VV++  KPK++V ++GE KTF PEEISSMVL+
Sbjct: 86  TVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLS 145
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKETAEAYLG  V+ AVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAA+AYGL
Sbjct: 146 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 205
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           D+   GERNVLIFDLGGGTFDVS+LSID G +FEV++TAGDTHLGGEDFDNRLV+H  EE
Sbjct: 206 DRRGAGERNVLIFDLGGGTFDVSVLSIDAG-VFEVKATAGDTHLGGEDFDNRLVNHFMEE 264
Query: 243 FKRK 246
           F+RK
Sbjct: 265 FRRK 268

>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387

Iteration: 1
 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/255 (79%), Positives = 222/255 (87%), Gaps = 5/255 (1%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA NP 
Sbjct: 6   PAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAXNPT 65
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NT+FDAKRLIGRKF+D  +Q D KHWPF VV++  KPK+QVE+KGE KTF PEEISS VL
Sbjct: 66  NTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSXVL 125
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TK KE AEAYLG  V  AVITVPAYFND+QRQATKDAG I GLNV+RI+NEPTAAA+AYG
Sbjct: 126 TKXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 185
Query: 182 LDKN--LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL 239
           LDK     GE+NVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR VSHL
Sbjct: 186 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRXVSHL 244
Query: 240 AEEFKRKCRSASDVG 254
           AEEFKRK +   D+G
Sbjct: 245 AEEFKRKHK--KDIG 257

>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQ 302
           +Q LLQ+FF GK LN SINPDE           IL GD+
Sbjct: 349 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDK 387

>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400

Iteration: 1
 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/248 (74%), Positives = 212/248 (85%), Gaps = 2/248 (0%)
Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PAIGIDLGTTYSCV V++   V+I+ NDQGNRTTPSYVAFT+TERLIGDAAKNQVA NP 
Sbjct: 20  PAIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNPE 79
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMV 120
           NTVFDAKRLIGRKFDD  +Q DM HWPF VV   + KP I V + GE+K F  EEIS+MV
Sbjct: 80  NTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMV 139
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           L KMKE +EAYLG  +++AV+TVPAYFND+QRQATKDAGAIAGLNVMRI+NEPTAAA+AY
Sbjct: 140 LQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 199
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDK   GERNVLIFDLGGGTFDVS+L+I++G +FEV++TAGDTHLGGEDFDNRLV    
Sbjct: 200 GLDKKGTGERNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCV 258
Query: 241 EEFKRKCR 248
           ++FKRK R
Sbjct: 259 QDFKRKNR 266

>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408

Iteration: 1
 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/247 (72%), Positives = 209/247 (84%), Gaps = 4/247 (1%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPR 61
            +GIDLGTTYSCV VF+ G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+  NP 
Sbjct: 28  VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE 87
Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKG-ERKTFAPEEISSMV 120
           NTVFDAKRLIGR ++DP +QQD+K  PF VV  ++KP IQV+  G + KTFAPEEIS+MV
Sbjct: 88  NTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMV 147
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMKETAEAYLG  V  AV+TVPAYFNDAQRQATKDAG IAGLNVMRI+NEPTAAA+AY
Sbjct: 148 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAY 207
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
           GLDK  +GE+N+L+FDLGGGTFDVS+L+ID G +FEV +T GDTHLGGEDFD R++ H  
Sbjct: 208 GLDKR-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFI 265
Query: 241 EEFKRKC 247
           + +K+K 
Sbjct: 266 KLYKKKT 272

>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384

Iteration: 1
 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/246 (72%), Positives = 209/246 (84%), Gaps = 4/246 (1%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           +GIDLGTTYSCV VF+ G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+  NP N
Sbjct: 8   VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 67
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKG-ERKTFAPEEISSMVL 121
           TVFDAKRLIGR ++DP +QQD+K  PF VV  ++KP IQV+  G + KTFAPEEIS+MVL
Sbjct: 68  TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMVL 127
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKETAEAYLG  V  AV+TVPAYFNDAQRQATKDAG IAGLNVMRI+NEPTAAA+AYG
Sbjct: 128 TKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYG 187
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
           LDK  +GE+N+L+FDLGGGTFDVS+L+ID G +FEV +T GDTHLGGEDFD R++ H  +
Sbjct: 188 LDKR-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFIK 245
Query: 242 EFKRKC 247
            +K+K 
Sbjct: 246 LYKKKT 251

>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390

Iteration: 1
 Score =  359 bits (921), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 170/243 (69%), Positives = 203/243 (83%), Gaps = 2/243 (0%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGIDLGTTYSCVAV + GK EI+AN+QGNR TPSYVAFTD ERLIGDAAKNQVA NP+NT
Sbjct: 17  IGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNT 76
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
           +FD KRLIG K++D  +Q+D+KH PF VVN   KP ++V  KGE+K F PEEIS M+L K
Sbjct: 77  IFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGK 136
Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
           MK+ AE YLG  V  AV+TVPAYFNDAQRQATKDAG IAGLNV+RIVNEPTAAA+AYGLD
Sbjct: 137 MKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLD 196
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           K+ K E  ++++DLGGGTFDVS+LSI+ G +FEV++T+GDTHLGGEDFD ++V  L + F
Sbjct: 197 KSDK-EHQIIVYDLGGGTFDVSLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAF 254
Query: 244 KRK 246
           K+K
Sbjct: 255 KKK 257

>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387

Iteration: 1
 Score =  352 bits (902), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 170/246 (69%), Positives = 202/246 (82%), Gaps = 3/246 (1%)
Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
           AIGIDLGTTYSCVA ++   VEIIAN+QGNR TPS+VAFT  ERLIGDAAKNQ A+NPRN
Sbjct: 12  AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRN 70
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           TVFDAKRLIGR+FDD  +Q+DMK WPF V++    P I+V++  E KTF+P+EIS+MVLT
Sbjct: 71  TVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLT 130
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMKE AEA +G  V  AVITVPAYFNDAQRQATKDAGAI+GLNV+RI+NEPTAAA+AYGL
Sbjct: 131 KMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 190
Query: 183 DK-NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
                + ER+VLIFDLGGGTFDVS+L I  G ++ V+ST+G+THLGG+DFD  L+ H   
Sbjct: 191 GAGKSEKERHVLIFDLGGGTFDVSLLHI-AGGVYTVKSTSGNTHLGGQDFDTNLLEHFKA 249
Query: 242 EFKRKC 247
           EFK+K 
Sbjct: 250 EFKKKT 255

>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605

Iteration: 1
 Score =  280 bits (715), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/246 (58%), Positives = 179/246 (72%), Gaps = 8/246 (3%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T D E L+G  AK Q   NP+N
Sbjct: 5   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++         VE KG++   AP +IS+ VL 
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA-ADNGDAWVEVKGQK--MAPPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMK+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
           DK   G R + ++DLGGGTFD+SI+ IDE      FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
            EEFK+
Sbjct: 241 VEEFKK 246

>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605

Iteration: 1
 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/299 (42%), Positives = 173/299 (57%), Gaps = 13/299 (4%)
Query: 229 EDFDNRLVSHLAEEFKRKCRSASDVGDH---HGDAHF-VVQSLLQNFFCGKSLNLSINPD 284
           ED  NR +  L    +    S SD+ D     G     +VQ  +  FF GK     +NPD
Sbjct: 310 EDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPD 368
Query: 285 EXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQ 344
           E           +L+GD    ++DVLL+DVTPLSLGIET GGVMT LI +NT IP K +Q
Sbjct: 369 EAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQ 424
Query: 345 TFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 404
            F+T  DNQ AVTI V +GER    DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL
Sbjct: 425 VFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGIL 484
Query: 405 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYV 464
           +V+AKD +SGK Q ITIK   G L+++EI +M+ DAE   + D K  E +  RN  +  +
Sbjct: 485 HVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLL 543
Query: 465 FNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 523
            + ++ +++AG+KL   +K+       A    L      DK   + K+Q+L +    LM
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLM 599

>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383

Iteration: 1
 Score =  278 bits (710), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 144/246 (58%), Positives = 179/246 (72%), Gaps = 8/246 (3%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T D E L+G  AK Q   NP+N
Sbjct: 5   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++         VE KG++   AP +IS+ VL 
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA-ADNGDAWVEVKGQK--MAPPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMK+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
           DK   G R + ++DLGGGTFD+SI+ IDE      FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
            EEFK+
Sbjct: 241 VEEFKK 246

>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605

Iteration: 1
 Score =  269 bits (687), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 141/246 (57%), Positives = 176/246 (71%), Gaps = 8/246 (3%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T D   L+G  AK Q   NP+N
Sbjct: 5   IGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQN 64
Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++         VE KG++   AP +IS+ VL 
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIXPFKIIA-ADNGDAWVEVKGQKX--APPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K K+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KXKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
           DK   G R + ++DLGGG FD+SI+ IDE      FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
            EEFK+
Sbjct: 241 VEEFKK 246

>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605

Iteration: 1
 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/298 (41%), Positives = 168/298 (56%), Gaps = 13/298 (4%)
Query: 229 EDFDNRLVSHLAEEFKRKCRSASDVGDH---HGDAHF-VVQSLLQNFFCGKSLNLSINPD 284
           ED  NR +  L    +    S SD+ D     G      VQ  +  FF GK     +NPD
Sbjct: 310 EDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFF-GKEPRKDVNPD 368
Query: 285 EXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQ 344
           E           +L+GD    ++DVLL+DVTPLSLGIET GGV T LI +NT IP K +Q
Sbjct: 369 EAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETXGGVXTTLIAKNTTIPTKHSQ 424
Query: 345 TFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 404
            F+T  DNQ AVTI V +GER    DN  LG F+L GI PAPRG P+I+VTFD+DA+GIL
Sbjct: 425 VFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDIDADGIL 484
Query: 405 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYV 464
           +V+AKD +SGK Q ITIK   G L+++EI + + DAE   + D K +E +  RN  +  +
Sbjct: 485 HVSAKDKNSGKEQKITIKASSG-LNEDEIQKXVRDAEANAEADRKCEELVQTRNQGDHLL 543
Query: 465 FNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 522
            + ++ +++AG+KL   +K+       A    L      DK   + K Q+L +    L
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKXQELAQVSQKL 598

>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159

Iteration: 1
 Score =  255 bits (652), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/159 (74%), Positives = 143/159 (89%)
Query: 303 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 362
           S  +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1   SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 363 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 422
           GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK   ITI 
Sbjct: 61  GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 423 NDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461
           NDKGRLSKE+I+RM+ +AE+YK EDEKQ++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159

>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509

Iteration: 1
 Score =  247 bits (630), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/243 (53%), Positives = 168/243 (69%), Gaps = 31/243 (12%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGIDLGTT SCVAV + G+V++I N +GNRTTPS VAF + ERL+G+ AK Q   NP NT
Sbjct: 5   IGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NT 63
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
           +   KR +G  +                         +VE +G  K + P+EIS+++L  
Sbjct: 64  IISIKRHMGTDY-------------------------KVEIEG--KQYTPQEISAIILQY 96
Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
           +K  AE YLG  V  AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGLD
Sbjct: 97  LKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLD 156
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           K  + ++ +L++DLGGGTFDVSIL + +G +FEV++TAGD HLGG+DFD  ++ +L  +F
Sbjct: 157 K--EEDQTILVYDLGGGTFDVSILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVNQF 213
Query: 244 KRK 246
           K++
Sbjct: 214 KQE 216

>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509

Iteration: 1
 Score =  199 bits (506), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/186 (55%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 273 CGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLI 332
            GK  +  +NPDE           +++G+    ++DV+L+DVTPLSLGIET GGV TKLI
Sbjct: 326 LGKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLI 381
Query: 333 ERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKI 392
           ERNT IP  ++Q FTT ADNQ  V I V +GER M  DN  LG F LTGIPPAPRGVP+I
Sbjct: 382 ERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQI 441
Query: 393 DVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKE 452
           +VTFD+DANGI++V AKD  + K Q+ITIK+  G LS+EEI RMI +AE   + D K+KE
Sbjct: 442 EVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKE 500
Query: 453 RISARN 458
               RN
Sbjct: 501 AAELRN 506

>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152

Iteration: 1
 Score =  228 bits (582), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 104/149 (69%), Positives = 134/149 (89%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PLSLGIETAGGVMT LI+RNTRIP K  +TFTTYADNQP V+IQV+EGERAMT+DN+
Sbjct: 4   DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
            LGTF+L+GIPPAPRGVP+I+VTF++DANGILNV+A+D S+GKS  ITI+N+KGRL++ +
Sbjct: 64  RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           IDRM+++A++++ ED +Q+ER+ ARN LE
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARNQLE 152

>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152

Iteration: 1
 Score =  211 bits (537), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 98/149 (65%), Positives = 122/149 (81%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV  L+LGIET GGVMT LI+RNT IP K++Q F+T  DNQP V I+V+EGERAM+KDNN
Sbjct: 4   DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
           LLG F+LTGIPPAPRGVP+I+VTF LDANGIL V+A D  +GKS++ITI NDKGRL++EE
Sbjct: 64  LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           IDRM+ +AE++  ED   K ++ +RN LE
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRNKLE 152

>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152

Iteration: 1
 Score =  195 bits (496), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 90/149 (60%), Positives = 119/149 (79%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PL+LGIET GGVMTKLI RNT IP K++Q F+T AD+Q AV+I ++EGER M  DN+
Sbjct: 4   DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
            LG FD+TGIPPAPRGVP+I+VTF++D NGIL+V+A+D  +G    +TI ND  RLS E+
Sbjct: 64  KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           I+RMINDA+++  +D+ QKE++ +RN LE
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRNELE 152

>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219

Iteration: 1
 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/220 (46%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
           VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER   
Sbjct: 1   VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
            DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G L
Sbjct: 61  ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
           +++EI +M+ DAE   + D K +E +  RN  +  + + ++ +++AG+KL   +K+    
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
              A    L     A  E    +L Q+ +  M +  + H 
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219

>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219

Iteration: 1
 Score =  192 bits (489), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/220 (46%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
           VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER   
Sbjct: 1   VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
            DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G L
Sbjct: 61  ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
           +++EI +M+ DAE   + D K  E +  RN  +  + + ++ +++AG+KL   +K+    
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
              A    L     A  E    +L Q+ +  M +  + H 
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219

>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219

Iteration: 1
 Score =  192 bits (488), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/220 (45%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
           VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AV+I V +GER   
Sbjct: 1   VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
            DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G L
Sbjct: 61  ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
           +++EI +M+ DAE   + D K +E +  RN  +  + + ++ +++AG+KL   +K+    
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
              A    L     A  E    +L Q+ +  M +  + H 
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219

>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191

Iteration: 1
 Score =  189 bits (480), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Query: 306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGER 365
           ++DVLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER
Sbjct: 16  VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER 75
Query: 366 AMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDK 425
               DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   
Sbjct: 76  KRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS 135
Query: 426 GRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKL 478
           G L+++EI +M+ DAE   + D K +E +  RN  +  + + ++ +++AG+KL
Sbjct: 136 G-LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKL 187

>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182

Iteration: 1
 Score =  185 bits (470), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 89/161 (55%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Query: 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDN 371
           +DVTPLSLGIET GGV TKLI RNT IP K++Q F+T AD Q  V I+V +GER M  DN
Sbjct: 23  MDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDN 82
Query: 372 NLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKE 431
            LLG F L GIPPAPRGVP+I+VTFD+DANGI++V+AKD  +G+ Q I I++  G LSK+
Sbjct: 83  KLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGG-LSKD 141
Query: 432 EIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALD 472
           +I+ M+ +AE+Y +ED ++KER+ A N  E  + + +  ++
Sbjct: 142 DIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME 182

>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151

Iteration: 1
 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 111/149 (74%), Gaps = 1/149 (0%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DVTPLSLGIET GG+MTKLI RNT IP K++Q F+T AD Q  V I+VF+GER M   N 
Sbjct: 4   DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
           LLG F L GIPPAPRGVP+++VTFD+DANGI+NV+A+D  +GK Q I I++  G LSK++
Sbjct: 64  LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQ 122
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           I+ MI +AE+   ED K+KE +   N  E
Sbjct: 123 IENMIKEAEKNAAEDAKRKELVEVINQAE 151

>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675

Iteration: 1
 Score =  166 bits (420), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
            G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +NT
Sbjct: 5   FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR+IG  +  P  +Q+ KH+   +V  D  K   +V F GE+  F+  ++++M + 
Sbjct: 65  VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 124
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++YG+
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 184
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K    +GE   R V   D+G  ++  SI++  +G L +V  TA D H GG DFD  +  
Sbjct: 185 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 243
Query: 238 HLAEEFKRKCR 248
           H A+EFK K +
Sbjct: 244 HFADEFKTKYK 254

>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668

Iteration: 1
 Score =  166 bits (419), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
            G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +NT
Sbjct: 7   FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 66
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR+IG  +  P  +Q+ KH+   +V  D  K   +V F GE+  F+  ++++M + 
Sbjct: 67  VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 126
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++YG+
Sbjct: 127 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 186
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K    +GE   R V   D+G  ++  SI++  +G L +V  TA D H GG DFD  +  
Sbjct: 187 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 245
Query: 238 HLAEEFKRKCR 248
           H A+EFK K +
Sbjct: 246 HFADEFKTKYK 256

>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658

Iteration: 1
 Score =  166 bits (419), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
            G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +NT
Sbjct: 4   FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 63
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR+IG  +  P  +Q+ KH+   +V  D  K   +V F GE+  F+  ++++M + 
Sbjct: 64  VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 123
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++YG+
Sbjct: 124 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 183
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K    +GE   R V   D+G  ++  SI++  +G L +V  TA D H GG DFD  +  
Sbjct: 184 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 242
Query: 238 HLAEEFKRKCR 248
           H A+EFK K +
Sbjct: 243 HFADEFKTKYK 253

>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675

Iteration: 1
 Score =  162 bits (409), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 142/251 (56%), Gaps = 7/251 (2%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
            G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +NT
Sbjct: 5   FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           V + KR+IG  +  P  +Q+ KH+   +V  D  K   +V F GE+  F+  ++++  + 
Sbjct: 65  VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAXFID 124
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++YG+
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 184
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
            K    +GE   R V   D+G  ++  SI +  +G L +V  TA D H GG DFD  +  
Sbjct: 185 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQL-KVLGTACDKHFGGRDFDLAITE 243
Query: 238 HLAEEFKRKCR 248
           H A+EFK K +
Sbjct: 244 HFADEFKTKYK 254

>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135

Iteration: 1
 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/116 (64%), Positives = 89/116 (76%)
Query: 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKD 370
           +VDVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER    D
Sbjct: 19  MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 371 NNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
           N  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G
Sbjct: 79  NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134

>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115

Iteration: 1
 Score =  151 bits (382), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 87/114 (76%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER    DN 
Sbjct: 1   DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
            LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G
Sbjct: 61  SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 114

>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227

Iteration: 1
 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 16/205 (7%)
Query: 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDN 371
           +DV PLSLG+ET GG++ K+I RNT IP  + Q FTT+ D Q A++I V +GER + +D 
Sbjct: 1   MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 372 NLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKE 431
             L  F L GIP  P G   I VTF +DA+G+L+VTA + S+G   +I +K   G L+  
Sbjct: 61  RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDS 119
Query: 432 EIDRMINDAERYKDEDEKQK----ERISARNNLEAY-----------VFNVKQALDDAGN 476
           EI  MI D+  Y ++D K +    +++ A   LE+                +Q +DDA  
Sbjct: 120 EIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAA 179
Query: 477 KLTESEKSRCREECDATLKWLDNNT 501
            L+E  +    +  +  +K +D  T
Sbjct: 180 HLSEVAQGDDVDAIEQAIKNVDKQT 204

>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGI  G + S +A     K E+IAN+ G+R  P+ +++ D +   G  AKN +  NP+NT
Sbjct: 16  IGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNT 75
Query: 64  VFDAKRLIGRKFD--DPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           V   + ++G+ F   DP       H      N     K + E   E  T    EI++  L
Sbjct: 76  VAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYL 135
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY- 180
            ++   A  YLG  V  AVIT+P  F + Q+ A   A A A L V+++++EP AA LAY 
Sbjct: 136 RRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYD 195
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
              +    ++ +++ DLGG   DV++L+   G ++ + +T  D    G   D  L+ H +
Sbjct: 196 ARPEATISDKIIVVADLGGSRSDVTVLASRSG-MYTILATVHDYEYHGIALDKVLIDHFS 254
Query: 241 EEFKRKCRSASD 252
           +EF +K   A D
Sbjct: 255 KEFLKKNPGAKD 266

>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191

Iteration: 1
 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 55/68 (80%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
           A GLD+  KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H
Sbjct: 2   AMGLDRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNH 60
Query: 239 LAEEFKRK 246
             EEFKRK
Sbjct: 61  FVEEFKRK 68

>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b. Length = 113

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 452 ERISARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQ 509
           ER+SA+N LE+Y FN K A++D G   K++E++K +  ++C   + WLD NTLA+K+E++
Sbjct: 6   ERVSAKNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFE 65
Query: 510 DKLQQLQKSCMPLMSKMH 527
            K ++L++ C P++S ++
Sbjct: 66  HKRKELEQVCNPIISGLY 83

>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of Human Heat Shock Protein 70 Length = 75

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 455 SARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKL 512
           SA+N LE+Y FN+K A++D G   K++E++K +  ++C   + WLD NTLA+K+E++ K 
Sbjct: 2   SAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKR 61
Query: 513 QQLQKSCMPLMSKM 526
           ++L++ C P++S +
Sbjct: 62  KELEQVCNPIISGL 75

>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From C. Elegans Hsp70 Length = 120

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 460 LEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE+Y FN+KQ ++D    +K++  +K +  ++CD  LKWLD+N  A+KEE++ + + L+ 
Sbjct: 23  LESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEG 82
Query: 518 SCMPLMSKMH 527
              P++SK++
Sbjct: 83  LANPIISKLY 92

>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal Length = 344

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 61/246 (24%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGIDLGT  + V  F +GK  I+ N+      PS +A   T    G+  K          
Sbjct: 6   IGIDLGTANTLV--FLRGK-GIVVNE------PSVIAIDSTT---GEILKVG-------- 45
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEF-----KGERKTFAPEEISS 118
             +AK +IG+     K  + M+     V+ D +   + + +     KG    F P     
Sbjct: 46  -LEAKNMIGKTPATIKAIRPMRDG---VIADYTVALVMLRYFINKAKGGMNLFKPR---- 97
Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
                                VI VP    D +R+A  DAG  AG + + ++ EP AAA+
Sbjct: 98  --------------------VVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAI 137
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
              L  N++     ++ D+GGGT +V+++S+     +E    AGD      + D  +V +
Sbjct: 138 GSNL--NVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGD------EMDEAIVQY 189
Query: 239 LAEEFK 244
           + E ++
Sbjct: 190 VRETYR 195

>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of Hsc70 Length = 113

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 460 LEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
           LE+Y FN K  ++D     K+ + +K +  ++C+  + WLD N  A+KEE++ + ++L+K
Sbjct: 9   LESYAFNXKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEK 68
Query: 518 SCMPLMSKMH 527
            C P+++K++
Sbjct: 69  VCNPIITKLY 78

>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima Length = 344

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 61/246 (24%)
Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
           IGIDLGT  + V  F +GK  I+ N+      PS +A   T    G+  K          
Sbjct: 6   IGIDLGTANTLV--FLRGK-GIVVNE------PSVIAIDSTT---GEILKVG-------- 45
Query: 64  VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEF-----KGERKTFAPEEISS 118
             +AK  IG+    P   + ++     V+ D +   + + +     KG    F P     
Sbjct: 46  -LEAKNXIGKT---PATIKAIRPXRDGVIADYTVALVXLRYFINKAKGGXNLFKPR---- 97
Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
                                VI VP    D +R+A  DAG  AG + + ++ EP AAA+
Sbjct: 98  --------------------VVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPXAAAI 137
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
              L  N++      + D+GGGT +V+++S+     +E    AGD      + D  +V +
Sbjct: 138 GSNL--NVEEPSGNXVVDIGGGTTEVAVISLGSIVTWESIRIAGD------EXDEAIVQY 189
Query: 239 LAEEFK 244
           + E ++
Sbjct: 190 VRETYR 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	549
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	0.0
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	0.0
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	0.0
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	0.0
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	4e-17
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	0.0
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	1e-18
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	0.0
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	1e-137
3dob_A	152	Heat shock 70 kDa protein F44E5.5; structural geno	1e-113
3h0x_A	152	78 kDa glucose-regulated protein homolog; structur	1e-113
2op6_A	152	Heat shock 70 kDa protein D; HSP70/peptide-binding	1e-111
4e81_A	219	Chaperone protein DNAK; chaperone; 1.90A {Escheric	1e-101
3n8e_A	182	Stress-70 protein, mitochondrial; beta-sandwich, h	1e-94
1u00_A	227	HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A	1e-92
3dqg_A	151	Heat shock 70 kDa protein F; structural genomics,	4e-84
1q5l_A	135	Chaperone protein DNAK; HSP70, chaperone, heat sho	4e-72
2p32_A	120	Heat shock 70 kDa protein A; three-helix bundle, c	7e-38
3lof_A	113	Heat shock 70 kDa protein 1; structural genomics,	7e-32
3h1q_A	272	Ethanolamine utilization protein EUTJ; ethanolamin	2e-27
1ud0_A	113	HSC70, 70 kDa heat-shock-like protein; chaperone;	3e-27
2fsj_A	346	Hypothetical protein TA0583; actin homologs, archa	9e-19
2zgy_A	320	Plasmid segregation protein PARM; plasmid partitio	1e-15
4apw_A	329	ALP12; actin-like protein; 19.70A {Clostridium tet	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3js6_A	355	Uncharacterized PARM protein; partition, segregati	1e-07
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	3e-05
2ych_A	377	Competence protein PILM; cell cycle, type IV pilus	1e-04
1jce_A	344	ROD shape-determining protein MREB; MBL, actin, HS	4e-04

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554

 Score =  869 bits (2247), Expect = 0.0
 Identities = 334/550 (60%), Positives = 391/550 (71%), Gaps = 79/550 (14%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 5   PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184

Query: 182 LDKNLKGERNVLI-------FD---------------------LGGGTFDVSI------- 206
           LDK +  ERNVLI       FD                     LGG  FD  +       
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE 244

Query: 207 --------LSIDEGALFEVR----------STAGDTHL------GGEDFDNR-------- 234
                   +S ++ A+  +R          S++    +       G DF           
Sbjct: 245 FKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEE 304

Query: 235 LVSHLAEEFKRKCRSA-SDVGDHHGDAHFVV-----------QSLLQNFFCGKSLNLSIN 282
           L + L          A  D        H +V           Q LLQ+FF GK LN SIN
Sbjct: 305 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 364

Query: 283 PDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQ 342
           PDEAVAYGAAVQAAILSGD+S  +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQ
Sbjct: 365 PDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQ 424

Query: 343 TQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANG 402
           TQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANG
Sbjct: 425 TQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484

Query: 403 ILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEA 462
           ILNV+A D S+GK   ITI NDKGRLSKE+I+RM+ +AE+YK EDEKQ++++S++N+LE+
Sbjct: 485 ILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLES 544

Query: 463 YVFNVKQALD 472
           Y FN+K  ++
Sbjct: 545 YAFNMKATVE 554

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675

 Score =  799 bits (2066), Expect = 0.0
 Identities = 139/643 (21%), Positives = 248/643 (38%), Gaps = 109/643 (16%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
              G+DLG   S +AV +   ++I+ N+  NR+TPS V F    R +G+  KN+   N +
Sbjct: 3   TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIK 62

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMV 120
           NTV + KR+IG  +  P  +Q+ KH+   +V  D  K   +V F GE+  F+  ++++M 
Sbjct: 63  NTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMF 122

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           + K+K+T +     ++ D  I VP ++ + QR    DA  IAGLN +RIVN+ TAA ++Y
Sbjct: 123 IDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSY 182

Query: 181 GLDKNL-----KGERNVLIFD----------------------------LGGGTFDVSI- 206
           G+ K       +  R V   D                             GG  FD++I 
Sbjct: 183 GIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242

Query: 207 --------------LSIDEGALFEVR----------STAGDTHL------GGEDFDNR-- 234
                         +  +  A   +           S   +            D  ++  
Sbjct: 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLS 302

Query: 235 ------LVSHLAEEFKRKCRSA-SDVGDHHGDAHFVV-----------QSLLQNFFCGKS 276
                 LV  L E        A +       +  FV            +  +   F GK 
Sbjct: 303 REELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKP 361

Query: 277 LNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGV----MTKLI 332
           L+ ++N DEA+A GAA   AI S      ++     D+ P S+       V      ++ 
Sbjct: 362 LSTTLNQDEAIAKGAAFICAIHSPTL--RVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVF 419

Query: 333 ERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGI--PPAPRGVP 390
              +  P  +  T     D   A +          T +   +  +++TG+  P     VP
Sbjct: 420 PAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQ--IANWEITGVQLPEGQDSVP 477

Query: 391 KIDVTFDLDANGILNV----------TAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDA 440
            + +    D +G+  +             DT + K  ++TI      L  ++++ +I   
Sbjct: 478 -VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKE 536

Query: 441 ERYKDEDEKQKERISARNNLEAYVFNVKQALDDA-GNKLTESEKSRCREECDATLKWL-D 498
                +D+   E    +N LE Y++ ++  L++      +++EK++ +   +   +WL D
Sbjct: 537 NEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYD 596

Query: 499 NNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRG 541
               + K +Y  K ++L      +  +              + 
Sbjct: 597 EGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQ 639

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605

 Score =  626 bits (1617), Expect = 0.0
 Identities = 258/613 (42%), Positives = 333/613 (54%), Gaps = 103/613 (16%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T   E L+G  AK Q   NP+N
Sbjct: 5   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++         VE KG  +  AP +IS+ VL 
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG--QKMAPPQISAEVLK 121

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMK+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181

Query: 183 DKNLKGERNVLI-------FD-------------------------LGGGTFDVSIL--- 207
           DK   G R + +       FD                         LGG  FD  ++   
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240

Query: 208 --------SID---------------EGALFEVRS-----------TAGDT---HLGGE- 229
                    ID               E A  E+ S           TA  T   H+  + 
Sbjct: 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV 300

Query: 230 ---DFDNRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCG 274
                ++ LV  L        + A  D G    D   V           VQ  +  FF G
Sbjct: 301 TRAKLES-LVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-G 358

Query: 275 KSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIER 334
           K     +NPDEAVA GAAVQ  +L+GD    ++DVLL+DVTPLSLGIET GGVMT LI +
Sbjct: 359 KEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAK 414

Query: 335 NTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDV 394
           NT IP K +Q F+T  DNQ AVTI V +GER    DN  LG F+L GI PAPRG+P+I+V
Sbjct: 415 NTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEV 474

Query: 395 TFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERI 454
           TFD+DA+GIL+V+AKD +SGK Q ITIK   G L+++EI +M+ DAE   + D K  E +
Sbjct: 475 TFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDELV 533

Query: 455 SARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQ 514
             RN  +  + + ++ +++AG+KL   +K+       A    L      DK   + K+Q+
Sbjct: 534 QTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQE 590

Query: 515 LQKSCMPLMSKMH 527
           L +    LM    
Sbjct: 591 LAQVSQKLMEIAQ 603

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404

 Score =  569 bits (1469), Expect = 0.0
 Identities = 206/248 (83%), Positives = 224/248 (90%), Gaps = 3/248 (1%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           MPAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 23  MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 82

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            NT+FDAKRLIGRKF+D  +Q DMKHWPF VV++  KPK+QVE+KGE KTF PEEISSMV
Sbjct: 83  TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMV 142

Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
           LTKMKE AEAYLG  V  AVITVPAYFND+QRQATKDAG I GLNV+RI+NEPTAAA+AY
Sbjct: 143 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY 202

Query: 181 GLDK--NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
           GLDK     GE+NVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+VSH
Sbjct: 203 GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSH 261

Query: 239 LAEEFKRK 246
           LAEEFKRK
Sbjct: 262 LAEEFKRK 269

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404

 Score = 87.2 bits (217), Expect = 1e-18
 Identities = 31/38 (81%), Positives = 33/38 (86%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 301
           +Q LLQ+FF GK LN SINPDEAVAYGAAVQAAIL GD
Sbjct: 367 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509

 Score =  564 bits (1457), Expect = 0.0
 Identities = 237/543 (43%), Positives = 298/543 (54%), Gaps = 121/543 (22%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
            IGIDLGTT SCVAV + G+V++I N +GNRTTPS VAF + ERL+G+ AK Q   NP N
Sbjct: 4   IIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-N 62

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+   KR +G  +                         +VE +G  K + P+EIS+++L 
Sbjct: 63  TIISIKRHMGTDY-------------------------KVEIEG--KQYTPQEISAIILQ 95

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
            +K  AE YLG  V  AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 96  YLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGL 155

Query: 183 DKNLKGERNVLIFD----------------------------LGGGTFDVSIL------- 207
           DK  + ++ +L++D                            LGG  FD  I+       
Sbjct: 156 DK--EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQF 213

Query: 208 ----SID---------------EGALFEVRS-----------TAGDT---HLGGE----D 230
                ID               E A  E+             +A +    HL        
Sbjct: 214 KQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAK 273

Query: 231 FDNRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKSLN 278
           F+  L +HL E      R A  D G    D   V           VQ  ++    GK  +
Sbjct: 274 FE-ELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPH 331

Query: 279 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRI 338
             +NPDE VA GAA+Q  +++G+    ++DV+L+DVTPLSLGIET GGV TKLIERNT I
Sbjct: 332 KGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTI 387

Query: 339 PCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDL 398
           P  ++Q FTT ADNQ  V I V +GER M  DN  LG F LTGIPPAPRGVP+I+VTFD+
Sbjct: 388 PTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDI 447

Query: 399 DANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARN 458
           DANGI++V AKD  + K Q+ITIK+  G LS+EEI RMI +AE   + D K+KE    RN
Sbjct: 448 DANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKEAAELRN 506

Query: 459 NLE 461
             +
Sbjct: 507 EAD 509

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383

 Score =  402 bits (1035), Expect = e-137
 Identities = 143/246 (58%), Positives = 178/246 (72%), Gaps = 8/246 (3%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T   E L+G  AK Q   NP+N
Sbjct: 5   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++   +     VE KG  +  AP +IS+ VL 
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNG-DAWVEVKG--QKMAPPQISAEVLK 121

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMK+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGA---LFEVRSTAGDTHLGGEDFDNRLVSHL 239
           DK   G R + ++DLGGGTFD+SI+ IDE      FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240

Query: 240 AEEFKR 245
            EEFK+
Sbjct: 241 VEEFKK 246

>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152

 Score =  331 bits (851), Expect = e-113
 Identities = 104/149 (69%), Positives = 134/149 (89%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PLSLGIETAGGVMT LI+RNTRIP K  +TFTTYADNQP V+IQV+EGERAMT+DN+
Sbjct: 4   DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
            LGTF+L+GIPPAPRGVP+I+VTF++DANGILNV+A+D S+GKS  ITI+N+KGRL++ +
Sbjct: 64  RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123

Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           IDRM+++A++++ ED +Q+ER+ ARN LE
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARNQLE 152

>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152

 Score =  331 bits (850), Expect = e-113
 Identities = 98/149 (65%), Positives = 122/149 (81%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV  L+LGIET GGVMT LI+RNT IP K++Q F+T  DNQP V I+V+EGERAM+KDNN
Sbjct: 4   DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
           LLG F+LTGIPPAPRGVP+I+VTF LDANGIL V+A D  +GKS++ITI NDKGRL++EE
Sbjct: 64  LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123

Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           IDRM+ +AE++  ED   K ++ +RN LE
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRNKLE 152

>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152

 Score =  327 bits (841), Expect = e-111
 Identities = 90/149 (60%), Positives = 119/149 (79%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PL+LGIET GGVMTKLI RNT IP K++Q F+T AD+Q AV+I ++EGER M  DN+
Sbjct: 4   DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
            LG FD+TGIPPAPRGVP+I+VTF++D NGIL+V+A+D  +G    +TI ND  RLS E+
Sbjct: 64  KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123

Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           I+RMINDA+++  +D+ QKE++ +RN LE
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRNELE 152

>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219

 Score =  303 bits (777), Expect = e-101
 Identities = 103/223 (46%), Positives = 140/223 (62%), Gaps = 4/223 (1%)

Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
           VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AVTI V +GER   
Sbjct: 1   VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60

Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
            DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G L
Sbjct: 61  ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119

Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
           +++EI +M+ DAE   + D K +E +  RN  +  + + ++ +++AG+KL   +K+    
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179

Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAG 531
              A    L      DK   + K+Q+L +    LM        
Sbjct: 180 ALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQQHA 219

>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182

 Score =  285 bits (731), Expect = 1e-94
 Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 5/179 (2%)

Query: 294 QAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQ 353
               L  +          +DVTPLSLGIET GGV TKLI RNT IP K++Q F+T AD Q
Sbjct: 9   SGVDLGTE----NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQ 64

Query: 354 PAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSS 413
             V I+V +GER M  DN LLG F L GIPPAPRGVP+I+VTFD+DANGI++V+AKD  +
Sbjct: 65  TQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGT 124

Query: 414 GKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALD 472
           G+ Q I I++  G LSK++I+ M+ +AE+Y +ED ++KER+ A N  E  + + +  ++
Sbjct: 125 GREQQIVIQSSGG-LSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME 182

>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227

 Score =  281 bits (722), Expect = 1e-92
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 5/225 (2%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PLSLG+ET GG++ K+I RNT IP  + Q FTT+ D Q A++I V +GER + +D  
Sbjct: 2   DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
            L  F L GIP  P G   I VTF +DA+G+L+VTA + S+G   +I +K   G L+  E
Sbjct: 62  SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDSE 120

Query: 433 IDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDA 492
           I  MI D+  Y ++D K +     +      + ++  AL      L+ +E+    +    
Sbjct: 121 IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAH 180

Query: 493 TLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSK-MHGGAGGASAG 536
             +    +   D +  +  ++ + K      ++ M      A  G
Sbjct: 181 LSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKG 222

>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151

 Score =  256 bits (657), Expect = 4e-84
 Identities = 88/149 (59%), Positives = 111/149 (74%), Gaps = 1/149 (0%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DVTPLSLGIET GG+MTKLI RNT IP K++Q F+T AD Q  V I+VF+GER M   N 
Sbjct: 4   DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
           LLG F L GIPPAPRGVP+++VTFD+DANGI+NV+A+D  +GK Q I I++  G LSK++
Sbjct: 64  LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQ 122

Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
           I+ MI +AE+   ED K+KE +   N  E
Sbjct: 123 IENMIKEAEKNAAEDAKRKELVEVINQAE 151

>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135

 Score =  225 bits (575), Expect = 4e-72
 Identities = 75/132 (56%), Positives = 92/132 (69%)

Query: 295 AAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQP 354
           ++          +   +VDVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ 
Sbjct: 3   SSHHHHHHGLVPRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQS 62

Query: 355 AVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSG 414
           AVTI V +GER    DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SG
Sbjct: 63  AVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSG 122

Query: 415 KSQNITIKNDKG 426
           K Q ITIK   G
Sbjct: 123 KEQKITIKASSG 134

>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120

 Score =  134 bits (339), Expect = 7e-38
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 440 AERYKDEDEKQKERISARNNLEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWL 497
           +  +            +   LE+Y FN+KQ ++D    +K++  +K +  ++CD  LKWL
Sbjct: 3   SSHHHHHHSSGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWL 62

Query: 498 DNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRG------GPTVEEVD 549
           D+N  A+KEE++ + + L+    P++SK++  AGGA  G  P G      GPT+EEVD
Sbjct: 63  DSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPPGAAPGGAAGGAGGPTIEEVD 120

>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113

 Score =  118 bits (296), Expect = 7e-32
 Identities = 44/111 (39%), Positives = 71/111 (63%), Gaps = 10/111 (9%)

Query: 449 KQKERISARNNLEAYVFNVKQALDDAGN--KLTESEKSRCREECDATLKWLDNNTLADKE 506
              ER+SA+N LE+Y FN+K A++D G   K++E++K +  ++C   + WLD NTLA+K+
Sbjct: 3   AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKD 62

Query: 507 EYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRG--------GPTVEEVD 549
           E++ K ++L++ C P++S ++ GAGG   G             GPT+EEVD
Sbjct: 63  EFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD 113

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272

 Score =  110 bits (278), Expect = 2e-27
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 19/145 (13%)

Query: 115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPT 174
             +  ++ ++K   E  LG  +  A   +P        +A     A AGL ++ +V+EP 
Sbjct: 71  IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPV 130

Query: 175 AAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR 234
           AAA A G++         ++ D+GGGT  ++++   +           D   GG      
Sbjct: 131 AAARALGINDG-------IVVDIGGGTTGIAVIEKGKIT------ATFDEPTGGTHLSLV 177

Query: 235 LVSHL------AEEFKRKCRSASDV 253
           L          AE  K+      ++
Sbjct: 178 LAGSYKIPFEEAETIKKDFSRHREI 202

>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113

 Score =  105 bits (262), Expect = 3e-27
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 15/112 (13%)

Query: 453 RISARNNLEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQD 510
                + LE+Y FN+K  ++D     K+ + +K +  ++C+  + WLD N  A+KEE++ 
Sbjct: 2   VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEH 61

Query: 511 KLQQLQKSCMPLMSKMHGGAGGASAGDMPRG-------------GPTVEEVD 549
           + ++L+K C P+++K++  AGG   G                  GPT+EEVD
Sbjct: 62  QQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 113

>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346

 Score = 86.8 bits (214), Expect = 9e-19
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 54/259 (20%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           M  +G+D+G   +   +   GK  I          PS  A T+TE          ++ + 
Sbjct: 21  MVVVGLDVGYGDT-KVIGVDGKRIIF---------PSRWAVTETESWGIGGKIPVLSTDG 70

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
             T F    + G+      I+                              A +E   ++
Sbjct: 71  GQTKF----IYGKYASGNNIRVPQG----------------------DGRLASKEAFPLI 104

Query: 121 LTKMKETAEAYLGHSVRDAVIT-VPAYFNDAQRQATKDA------------GAIAGLNVM 167
              + E+     G  V   + +  P    D + +A K+A            G +   N+ 
Sbjct: 105 AAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNIT 164

Query: 168 RIVNEPTAAALAYGL---DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT 224
           R++  P     A  L       +     ++ D+G  T DV  +++ +     V   +   
Sbjct: 165 RLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEP--VVELSFSL 222

Query: 225 HLGGEDFDNRLVSHLAEEF 243
            +G  D  + L   +A+E 
Sbjct: 223 QIGVGDAISALSRKIAKET 241

>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320

 Score = 77.2 bits (189), Expect = 1e-15
 Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 30/243 (12%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           + ID G+T          K++   +D   +   S  +F  +     GD       +N   
Sbjct: 3   VFIDDGSTNI--------KLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQ 54

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
             FD          +   Q            D +   +              E+  +   
Sbjct: 55  YSFDPISPDAVVTTNIAWQYS----------DVNVVAVHHALL--TSGLPVSEVDIVCTL 102

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
            + E    Y   + +     +     + +++ T + G    +  ++++ E   A      
Sbjct: 103 PLTE----YYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQ 158

Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
           +  L    ++LI DLGG T D+S +    G L  +    GD+ LG     + +   L+  
Sbjct: 159 E--LDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLA 213

Query: 243 FKR 245
             +
Sbjct: 214 RTK 216

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 18/130 (13%), Positives = 36/130 (27%), Gaps = 19/130 (14%)

Query: 138 DAVITVPA--YFNDAQRQATKDA------------GAIAGLNVMRIVNEPTAAALAYGLD 183
             V+  P     N   ++  +D                    +  I  +   + + +   
Sbjct: 107 QLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ 166

Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           +N K + NV + D GG     S+       +    S       G +D   R+   L +  
Sbjct: 167 ENFKNK-NVAVIDFGGLNMGFSL--YRNCVV--NPSERFIEEHGVKDLIIRVGDALTDLN 221

Query: 244 KRKCRSASDV 253
                +    
Sbjct: 222 NGNLITNEQA 231

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 3e-08
 Identities = 67/544 (12%), Positives = 138/544 (25%), Gaps = 210/544 (38%)

Query: 16  AVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKF 75
           ++  + +++ I     +  + +   F                      V        +KF
Sbjct: 44  SILSKEEIDHIIM-SKDAVSGTLRLFWTLLS------------KQEEMV--------QKF 82

Query: 76  DDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHS 135
            +  ++ + K +  +         I+ E +       P  ++ M           Y+   
Sbjct: 83  VEEVLRINYK-FLMS--------PIKTEQRQ------PSMMTRM-----------YI--E 114

Query: 136 VRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIF 195
            RD +      +ND Q          A  NV R         L   L   L+  +NVLI 
Sbjct: 115 QRDRL------YNDNQV--------FAKYNVSR---LQPYLKLRQAL-LELRPAKNVLID 156

Query: 196 DLGG-GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK------RKCR 248
            + G G    + +++D                       ++   +  +FK      + C 
Sbjct: 157 GVLGSGK---TWVALD--VC----------------LSYKVQCKM--DFKIFWLNLKNCN 193

Query: 249 SASDVGDHHGDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQD 308
           S   V +            LQ        N +   D +          +      + ++ 
Sbjct: 194 SPETVLEM-----------LQKLLYQIDPNWTSRSDHSSNI------KLRIHSIQAELRR 236

Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIP---------CK-----QTQTFTTYADNQP 354
           +L        L           L+  N +           CK     + +  T +     
Sbjct: 237 LLKSKPYENCL-----------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT 285

Query: 355 AVTIQVFEGERAMTKDN--NLLGTF---DLTGIPP-APRGVPKIDVTFDLDANGILNVTA 408
              I +      +T D   +LL  +       +P       P          + I     
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-------RRLSII----- 333

Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVK 468
                                ++ +       + +K  +  +   I            ++
Sbjct: 334 -----------------AESIRDGLAT----WDNWKHVNCDKLTTI------------IE 360

Query: 469 QALDDAGNKLTESEKSRCREEC-----DA-----TLK--WLDNNTLADKEEYQDKLQQLQ 516
            +L    N L  +E  +  +        A      L   W D      K +    + +L 
Sbjct: 361 SSL----NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD----VIKSDVMVVVNKLH 412

Query: 517 KSCM 520
           K  +
Sbjct: 413 KYSL 416

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 2e-05
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 41/156 (26%)

Query: 397 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERI-- 454
           + D   + ++                  K  LSKEEID +I        +      R+  
Sbjct: 32  NFDCKDVQDMP-----------------KSILSKEEIDHIIM-----SKDAVSGTLRLFW 69

Query: 455 --SARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLD--NNTLADKEEY-- 508
              ++       F V++ L      L    K+  R+    T  +++  +    D + +  
Sbjct: 70  TLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128

Query: 509 -----QDKLQQLQKSCMPLMSK----MHGGAG-GAS 534
                     +L+++ + L       + G  G G +
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT 164

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 86/232 (37%)

Query: 348 TYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVT 407
            Y D      + VFE   A   +      FD   +   P+ +         + + I+   
Sbjct: 17  QYKD-----ILSVFE--DAFVDN------FDCKDVQDMPKSILS-----KEEIDHIIM-- 56

Query: 408 AKDTSSGKSQNITIKNDKGRLSKEEIDRMIND---------AERYKDEDEKQKER----- 453
           +KD  SG  +       K    +E + + + +             K E  +Q        
Sbjct: 57  SKDAVSGTLRLFWTLLSKQ---EEMVQKFVEEVLRINYKFLMSPIKTEQ-RQPSMMTRMY 112

Query: 454 ISARNNL--EAYVF---NV---------KQALDDAGNKLTESE-----------KS---- 484
           I  R+ L  +  VF   NV         +QAL     +L  ++           K+    
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL----LELRPAKNVLIDGVLGSGKTWVAL 168

Query: 485 -RCREECDATLK--------WLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH 527
             C       ++        WL    L +    +  L+ LQK    +     
Sbjct: 169 DVCL---SYKVQCKMDFKIFWL---NLKNCNSPETVLEMLQKLLYQIDPNWT 214

>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 31/267 (11%), Positives = 68/267 (25%), Gaps = 59/267 (22%)

Query: 1   MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
           +  + +D G  +                +      PS +                     
Sbjct: 4   VYVMALDFGNGFV-----------KGKINDEKFVIPSRIG------------------RK 34

Query: 61  RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
            N     K  +  K D  +   +  +    +  +           G+      +      
Sbjct: 35  TNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKT---TNTGKDTASTNDRYDIKS 91

Query: 121 LTKMKETAEAYLGHSVRDA------VITVPAYFNDAQRQATKDAGAIAGLNVM------- 167
              + E +   L   V +          +P+      +QA  +        +        
Sbjct: 92  FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKT 151

Query: 168 ------RIVNEPTAAALAYGLDKNLK----GERNVLIFDLGGGTFDVSILSIDEGALFEV 217
                 +IV +P    L   ++         E    + D G GT  +         +  V
Sbjct: 152 INVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQ----NMKRV 207

Query: 218 RSTAGDTHLGGEDFDNRLVSHLAEEFK 244
              +   + G  DF  R+ SH++++ +
Sbjct: 208 EEESFVINKGTIDFYKRIASHVSKKSE 234

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 44.0 bits (103), Expect = 3e-05
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 432 EIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL-DDAGNKLTESEKSRCREEC 490
           + DR+  + E  +   E+Q++R+   +        ++Q   + A   L E  + +  E+ 
Sbjct: 76  QADRLTQEPESIRKWREEQRKRLQELDAASK---VMEQEWREKAKKDLEEWNQRQ-SEQV 131

Query: 491 DATLKWLDNNTLADKEEYQD 510
           +   K   NN +ADK  YQ 
Sbjct: 132 E---KNKINNRIADKAFYQQ 148

>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 12/100 (12%)

Query: 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTA 221
           AGL  + +  +P A           + +R  L+ D+G  +  + +L         VR   
Sbjct: 163 AGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLL--RGDKPLAVRVLT 220

Query: 222 GDTHLGGEDFDNRLVSHL------AEEFKRKCRSASDVGD 255
               L G+DF   +          AEE KR    A+   +
Sbjct: 221 ----LSGKDFTEAIARSFNLDLLAAEEVKRTYGMATLPTE 256

>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Length = 344

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 59/264 (22%), Positives = 99/264 (37%), Gaps = 97/264 (36%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAF-TDTERL--IGDAAKNQVAMNP 60
           IGIDLGT  + V +  +G   I+ N+      PS +A  + T  +  +G  AKN +   P
Sbjct: 6   IGIDLGTANTLVFLRGKG---IVVNE------PSVIAIDSTTGEILKVGLEAKNMIGKTP 56

Query: 61  RNTV------------FDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGER 108
                           +    ++ R F    I +              KP++        
Sbjct: 57  ATIKAIRPMRDGVIADYTVALVMLRYF----INKAKGGMNL------FKPRV-------- 98

Query: 109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 168
                                          VI VP    D +R+A  DAG  AG + + 
Sbjct: 99  -------------------------------VIGVPIGITDVERRAILDAGLEAGASKVF 127

Query: 169 IVNEPTAAALAYGLDKNLKGERNV------LIFDLGGGTFDVSILSIDEGALFEVRS--T 220
           ++ EP AAA+   L+        V      ++ D+GGGT +V+++S+  G++    S   
Sbjct: 128 LIEEPMAAAIGSNLN--------VEEPSGNMVVDIGGGTTEVAVISL--GSIVTWESIRI 177

Query: 221 AGDTHLGGEDFDNRLVSHLAEEFK 244
           AGD      + D  +V ++ E ++
Sbjct: 178 AGD------EMDEAIVQYVRETYR 195

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	549
4b9q_A	605	Chaperone protein DNAK; HET: ATP; 2.40A {Escherich	100.0
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	100.0
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	100.0
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	100.0
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	100.0
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	100.0
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	100.0
4gni_A	409	Putative heat shock protein; HSP70-type ATPase, AT	100.0
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	100.0
4e81_A	219	Chaperone protein DNAK; chaperone; 1.90A {Escheric	100.0
1u00_A	227	HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A	100.0
3n8e_A	182	Stress-70 protein, mitochondrial; beta-sandwich, h	100.0
3h0x_A	152	78 kDa glucose-regulated protein homolog; structur	100.0
3dob_A	152	Heat shock 70 kDa protein F44E5.5; structural geno	99.98
3dqg_A	151	Heat shock 70 kDa protein F; structural genomics,	99.97
1jce_A	344	ROD shape-determining protein MREB; MBL, actin, HS	99.97
2op6_A	152	Heat shock 70 kDa protein D; HSP70/peptide-binding	99.96
1q5l_A	135	Chaperone protein DNAK; HSP70, chaperone, heat sho	99.91
2fsj_A	346	Hypothetical protein TA0583; actin homologs, archa	99.88
3h1q_A	272	Ethanolamine utilization protein EUTJ; ethanolamin	99.78
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	99.74
2ych_A	377	Competence protein PILM; cell cycle, type IV pilus	99.73
2zgy_A	320	Plasmid segregation protein PARM; plasmid partitio	99.73
3lof_A	113	Heat shock 70 kDa protein 1; structural genomics,	99.69
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	99.69
4ehu_A	276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	99.55
2p32_A	120	Heat shock 70 kDa protein A; three-helix bundle, c	99.53
1ud0_A	113	HSC70, 70 kDa heat-shock-like protein; chaperone;	99.46
4a2a_A	419	Cell division protein FTSA, putative; cell cycle,	99.4
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	99.38
3js6_A	355	Uncharacterized PARM protein; partition, segregati	99.36
4apw_A	329	ALP12; actin-like protein; 19.70A {Clostridium tet	99.19
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	99.04
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	98.83
4fo0_A	593	Actin-related protein 8; chromatin remodeling, nuc	98.59
4am6_A	655	Actin-like protein ARP8; nuclear protein, chromati	98.0
1hux_A	270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	97.54
1t6c_A	315	Exopolyphosphatase; alpha/beta protein, actin-like	97.29
2d0o_A	610	DIOL dehydratase-reactivating factor large subunit	97.29
1nbw_A	607	Glycerol dehydratase reactivase alpha subunit; mol	97.09
3mdq_A	315	Exopolyphosphatase; structural genomics, joint cen	96.4
3cer_A	343	Possible exopolyphosphatase-like protein; NESG, BL	95.09
1u6z_A	513	Exopolyphosphatase; alpha/beta protein, askha (ace	94.71
3bex_A	249	Type III pantothenate kinase; actin-like fold, ATP	93.88
3vov_A	302	Glucokinase, hexokinase; ROK, sugar kinase, transf	93.43
3djc_A	266	Type III pantothenate kinase; structural genomics,	92.75
3vgl_A	321	Glucokinase; ROK family, transferase; HET: BGC ANP	92.21
4db3_A	327	Glcnac kinase, N-acetyl-D-glucosamine kinase; stru	91.22
4htl_A	297	Beta-glucoside kinase; structural genomics, sugar	90.47
2ch5_A	347	NAGK protein; transferase, N-acetylglucosamine, gl	89.96
1iv0_A	98	Hypothetical protein; rnaseh-like, YQGF, structura	89.33
2e2o_A	299	Hexokinase; acetate and sugar kinases, HSP70, acti	89.31
2qm1_A	326	Glucokinase; alpha-beta structure, putative helix-	87.92
3hi0_A	508	Putative exopolyphosphatase; 17739545, structural	87.69
3r8e_A	321	Hypothetical sugar kinase; ribonuclease H-like mot	87.01
3epq_A	302	Putative fructokinase; SCRK, ADP binding, PSI2, MC	86.28
2ap1_A	327	Putative regulator protein; zinc binding protein,	86.18
2aa4_A	289	Mannac kinase, putative N-acetylmannosamine kinase	85.27
2gup_A	292	ROK family protein; sugar kinase, streptococcus pn	84.56
2yhx_A	457	Hexokinase B; transferase(phosphoryl,alcohol accep	83.78
1z05_A	429	Transcriptional regulator, ROK family; structural	82.75
1woq_A	267	Inorganic polyphosphate/ATP-glucomannokinase; tran	82.39
3mcp_A	366	Glucokinase; structural genomics, joint center for	82.32
1vhx_A	150	Putative holliday junction resolvase; structural g	82.13
3o8m_A	485	Hexokinase; rnaseh-like fold, glycolysis, glucose	81.99
2hoe_A	380	N-acetylglucosamine kinase; TM1224, structural gen	81.62
1z6r_A	406	MLC protein; transcriptional repressor, ROK family	80.03

>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D

Probab=100.00  E-value=7.1e-94  Score=777.37  Aligned_cols=513  Identities=52%  Similarity=0.821  Sum_probs=475.3

Q ss_pred             CC-EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh
Q psy3431           1 MP-AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP   78 (549)
Q Consensus         1 m~-vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~   78 (549)
                      |+ +||||||||||+||++.+|.+++++|..|++.+||+|+|.++ ++++|..|+.++.++|.++++++|||||+.++++
T Consensus         1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~   80 (605)
T 4b9q_A            1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE   80 (605)
T ss_dssp             -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred             CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence            54 999999999999999999999999999999999999999854 8999999999999999999999999999999999


Q ss_pred             HHHhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431          79 KIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        79 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~  157 (549)
                      .++...+.+||.+.. .++.+.+.  ..+  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus        81 ~v~~~~~~~p~~~~~~~~g~~~~~--~~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~  156 (605)
T 4b9q_A           81 EVQRDVSIMPFKIIAADNGDAWVE--VKG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD  156 (605)
T ss_dssp             HHHHHHTTCSSEEEECTTSBEEEE--ETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred             HHHHHhhcCCeEEEEcCCCceEEE--ECC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence            999999999999986 45555544  455  7899999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeC----CcEEEEEEecCCCCCCcchHHH
Q psy3431         158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDE----GALFEVRSTAGDTHLGGEDFDN  233 (549)
Q Consensus       158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~----~~~~~v~~~~~d~~lGG~~iD~  233 (549)
                      |++.|||+++++|+||+|||++|++... ..+.++||||+||||||+|++++.+    + .++++++.++.++||.+||.
T Consensus       157 Aa~~AGl~v~~li~EP~AAAlaygl~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~-~~evla~~gd~~lGG~d~D~  234 (605)
T 4b9q_A          157 AGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGAFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDS  234 (605)
T ss_dssp             HHHHTTCEEEEEEEHHHHHHHHHHTTSC-CSSEEEEEEEECSSCEEEEEEEEEESSSCE-EEEEEEEEEETTCSHHHHHH
T ss_pred             HHHHcCCceEEEeCcHHHHHHHhhhhcc-CCCCEEEEEECCCCeEEEEEEEEecCCCCc-eEEEEEecCCCCcChHHHHH
Confidence            9999999999999999999999998764 3578999999999999999999987    6 99999999999999999999


Q ss_pred             HHHHHHHHHHHhccc--------------cccccCC--------------------------------------------
Q psy3431         234 RLVSHLAEEFKRKCR--------------SASDVGD--------------------------------------------  255 (549)
Q Consensus       234 ~l~~~l~~~~~~~~~--------------~~~e~~K--------------------------------------------  255 (549)
                      +|++||.++|+.+++              .+||++|                                            
T Consensus       235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~  314 (605)
T 4b9q_A          235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN  314 (605)
T ss_dssp             HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence            999999999987654              5567666                                            


Q ss_pred             ---------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCccccee
Q psy3431         256 ---------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDV  309 (549)
Q Consensus       256 ---------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~  309 (549)
                                     +..+|+.|           |++.|+++| +..+..+.||++|||+|||++|+.+++    ..+++
T Consensus       315 ~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~----~~~~~  389 (605)
T 4b9q_A          315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTG----DVKDV  389 (605)
T ss_dssp             HTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHT----SSCSE
T ss_pred             HHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcC----CCCce
Confidence                           22233333           999999999 678889999999999999999999998    35789


Q ss_pred             EEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCC
Q psy3431         310 LLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGV  389 (549)
Q Consensus       310 ~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~  389 (549)
                      .+.|++|++||++..+|.|.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++||.|+|.
T Consensus       390 ~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~  469 (605)
T 4b9q_A          390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM  469 (605)
T ss_dssp             EEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred             EEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHH
Q psy3431         390 PKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQ  469 (549)
Q Consensus       390 ~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~  469 (549)
                      ++|+|+|++|.||+|+|++.++.||++.+++|.+. .+||++|+++|+++++++.++|+..+++.++||+||+|+|++++
T Consensus       470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~  548 (605)
T 4b9q_A          470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRK  548 (605)
T ss_dssp             CCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999887 57999999999999999999999999999999999999999999


Q ss_pred             HhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         470 ALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       470 ~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      .|++...++++++++.+...++++++||+.+   +.++|++++++|++.++|+..++++
T Consensus       549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  604 (605)
T 4b9q_A          549 QVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  604 (605)
T ss_dssp             HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred             HHHhhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9986447899999999999999999999976   6899999999999999999999865

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*

Probab=100.00  E-value=9.5e-94  Score=781.33  Aligned_cols=522  Identities=27%  Similarity=0.468  Sum_probs=477.6

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      |++||||||||||+||++.+|.+++|+|+.|++.+||+|+|.+++++||..|+.++.++|.++++++||+||+.++++.+
T Consensus         2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v   81 (675)
T 3d2f_A            2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF   81 (675)
T ss_dssp             CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred             CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+++||.+.. .+|.+.+.+.+.|+...++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus        82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  161 (675)
T 3d2f_A           82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA  161 (675)
T ss_dssp             HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred             HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence            9999999999986 578888888888877899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccC-C----CCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKN-L----KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR  234 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~-~----~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~  234 (549)
                      +.|||++++||+||+|||++|++.+. .    ..+.++||||+||||||+|++++.+| .++++++.|+.++||.+||++
T Consensus       162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g-~~~V~a~~gd~~lGG~d~D~~  240 (675)
T 3d2f_A          162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG-QLKVLGTACDKHFGGRDFDLA  240 (675)
T ss_dssp             HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHH
T ss_pred             HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC-eEEEEEEcCCCCccHHHHHHH
Confidence            99999999999999999999998653 1    35788999999999999999999988 899999999999999999999


Q ss_pred             HHHHHHHHHHhccc--------------cccccCC---------------------------------------------
Q psy3431         235 LVSHLAEEFKRKCR--------------SASDVGD---------------------------------------------  255 (549)
Q Consensus       235 l~~~l~~~~~~~~~--------------~~~e~~K---------------------------------------------  255 (549)
                      |++|+.++|+++++              .+||++|                                             
T Consensus       241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~  320 (675)
T 3d2f_A          241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP  320 (675)
T ss_dssp             HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence            99999999877654              5566666                                             


Q ss_pred             ----------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEe
Q psy3431         256 ----------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDV  314 (549)
Q Consensus       256 ----------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~  314 (549)
                                ++++|+.|           |++.|++.| +..+..+.||++|||+|||++|+.+++  .++++++.+.|+
T Consensus       321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv  397 (675)
T 3d2f_A          321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDI  397 (675)
T ss_dssp             HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEE
T ss_pred             HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEee
Confidence                      22333333           999999999 577888999999999999999999998  567889999999


Q ss_pred             ccccceEEeeCC----eeeEEEccCCCCCcccceeeeeccCCCCcEEEEE-eecCccccc-CCceeeEEEecCCCCCCCC
Q psy3431         315 TPLSLGIETAGG----VMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQV-FEGERAMTK-DNNLLGTFDLTGIPPAPRG  388 (549)
Q Consensus       315 ~~~~igi~~~~~----~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~i-y~ge~~~~~-~~~~ig~~~i~~i~~~~~g  388 (549)
                      +|++||+++.++    .+.+|||+|++||++++.+|++..++    .+.+ |+|++.++. +|..||+|.|+|+||.|+|
T Consensus       398 ~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g  473 (675)
T 3d2f_A          398 HPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQ  473 (675)
T ss_dssp             ECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred             eecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence            999999999877    49999999999999999999886543    4555 679998887 9999999999999999999


Q ss_pred             CC-eEEEEEEeCCCccEEEEEE----------ecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Q psy3431         389 VP-KIDVTFDLDANGILNVTAK----------DTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISAR  457 (549)
Q Consensus       389 ~~-~i~v~~~~d~~g~l~v~~~----------~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~  457 (549)
                      .+ +|+|+|.+|.||+|+|++.          ++.||+...++|++...+||++++++++++++++..+|+.++++.++|
T Consensus       474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~  553 (675)
T 3d2f_A          474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRK  553 (675)
T ss_dssp             SCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            85 9999999999999999995          688999999999987668999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhhcc-CccChhHHHHHHHHHHHHHHHhhcC-CcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         458 NNLEAYVFNVKQALDDAG-NKLTESEKSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       458 N~LE~~iy~~r~~l~~~~-~~~~~~e~~~i~~~l~~~~~Wl~~~-~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      |+||+|+|++|+.|++.. .++++++++++...|+++++|||++ .+++.++|++|+++|+++++||..|++|+.
T Consensus       554 n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~  628 (675)
T 3d2f_A          554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE  628 (675)
T ss_dssp             HHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999997644 7899999999999999999999865 578999999999999999999999988763

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}

Probab=100.00  E-value=1.6e-91  Score=759.03  Aligned_cols=512  Identities=53%  Similarity=0.827  Sum_probs=471.2

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .+||||||||||+||++.+|.+++++|+.|++.+||+|+|.. ++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v   82 (605)
T 2kho_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV   82 (605)
T ss_dssp             -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred             CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence            489999999999999999999999999999999999999964 5899999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.+||.++. .++.+.+.+  .|  ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus        83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~  158 (605)
T 2kho_A           83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG  158 (605)
T ss_dssp             HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred             HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence            9888899999874 566555554  55  689999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee----CCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID----EGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      +.|||+++++++||+|||++|++... ..+..+||||+||||||+|++++.    ++ .++++++.|+.++||.+||++|
T Consensus       159 ~~AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g-~~~v~a~~gd~~lGG~d~D~~l  236 (605)
T 2kho_A          159 RIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRL  236 (605)
T ss_dssp             HTTTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEEEEEEEECTTTSC-EEEEEEEEEESSCSGGGTHHHH
T ss_pred             HHcCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEEEEEEEEecCCCC-eEEEEEECCCCCccHHHHHHHH
Confidence            99999999999999999999998754 257889999999999999999998    67 9999999999999999999999


Q ss_pred             HHHHHHHHHhccc--------------cccccCC----------------------------------------------
Q psy3431         236 VSHLAEEFKRKCR--------------SASDVGD----------------------------------------------  255 (549)
Q Consensus       236 ~~~l~~~~~~~~~--------------~~~e~~K----------------------------------------------  255 (549)
                      ++|+.++|+++++              .+||++|                                              
T Consensus       237 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i  316 (605)
T 2kho_A          237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS  316 (605)
T ss_dssp             HHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGG
T ss_pred             HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHH
Confidence            9999999876543              4455554                                              


Q ss_pred             -------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEE
Q psy3431         256 -------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLL  311 (549)
Q Consensus       256 -------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~  311 (549)
                                   ++.+|+.|           |++.|++.| +..+..+.||++|||+|||++|+.+++    .++++.+
T Consensus       317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~----~~~~~~l  391 (605)
T 2kho_A          317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTG----DVKDVLL  391 (605)
T ss_dssp             TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTT----SCCCCCC
T ss_pred             HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcC----CccCceE
Confidence                         12334443           999999999 567889999999999999999999987    2577889


Q ss_pred             EEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCe
Q psy3431         312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPK  391 (549)
Q Consensus       312 ~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~  391 (549)
                      .|++|++||+++.+|.|.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++
T Consensus       392 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~  471 (605)
T 2kho_A          392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ  471 (605)
T ss_dssp             SBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSC
T ss_pred             EeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431         392 IDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL  471 (549)
Q Consensus       392 i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l  471 (549)
                      |+|+|.+|.||+|+|++.+..||+...++|++. .+||++|+++++++++++..+|+..+++.++||+||+|+|++|+.|
T Consensus       472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l  550 (605)
T 2kho_A          472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV  550 (605)
T ss_dssp             EEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999988 7899999999999999999999999999999999999999999999


Q ss_pred             hhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         472 DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       472 ~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      ++...++++++++.+.+.++++++||+++   +.++|++++++|++.++||..|++.
T Consensus       551 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  604 (605)
T 2kho_A          551 EEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  604 (605)
T ss_dssp             HHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred             HhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            87447899999999999999999999954   8899999999999999999999864

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*

Probab=100.00  E-value=3.3e-87  Score=718.60  Aligned_cols=469  Identities=76%  Similarity=1.171  Sum_probs=437.8

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      .+||||||||||+||++.+|.+++++|+.|++++||+|+|.+++++||..|+.++.++|.++++++|||||+.++++.++
T Consensus         5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~   84 (554)
T 1yuw_A            5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ   84 (554)
T ss_dssp             CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred             CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI  161 (549)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~  161 (549)
                      ..++.+||.++..++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.
T Consensus        85 ~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~  164 (554)
T 1yuw_A           85 SDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTI  164 (554)
T ss_dssp             HHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred             HHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            99999999999778888888988888789999999999999999999999999999999999999999999999999999


Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      ||++++++++||+|||++|++.+....+..+||||+||||||+|++++.++ .++++++.++.++||.+||++|++|+.+
T Consensus       165 AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~  243 (554)
T 1yuw_A          165 AGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA  243 (554)
T ss_dssp             TTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred             cCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCC-cEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999998765345789999999999999999999988 9999999999999999999999999999


Q ss_pred             HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431         242 EFKRKCR--------------SASDVGD----------------------------------------------------  255 (549)
Q Consensus       242 ~~~~~~~--------------~~~e~~K----------------------------------------------------  255 (549)
                      +|+++++              .+||++|                                                    
T Consensus       244 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~  323 (554)
T 1yuw_A          244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRD  323 (554)
T ss_dssp             HHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHH
T ss_pred             HHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8876654              4566665                                                    


Q ss_pred             ---CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccceE
Q psy3431         256 ---HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI  321 (549)
Q Consensus       256 ---~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~igi  321 (549)
                         ++.+|+.|           |++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|++||+
T Consensus       324 a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi  403 (554)
T 1yuw_A          324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGI  403 (554)
T ss_dssp             TTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEE
T ss_pred             cCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEE
Confidence               11233333           9999999997788889999999999999999999988544567888999999999999


Q ss_pred             EeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCCC
Q psy3431         322 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN  401 (549)
Q Consensus       322 ~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~~  401 (549)
                      ++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|.+|.|
T Consensus       404 ~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~  483 (554)
T 1yuw_A          404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDAN  483 (554)
T ss_dssp             EETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTT
T ss_pred             EecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431         402 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL  471 (549)
Q Consensus       402 g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l  471 (549)
                      |+|+|++.++.||+...++|++...+||++|+++++++++++..+|+..+++.++||+||+|+|++|+.|
T Consensus       484 gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l  553 (554)
T 1yuw_A          484 GILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV  553 (554)
T ss_dssp             CCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred             ceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999998877899999999999999999999999999999999999999998765

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}

Probab=100.00  E-value=6.5e-76  Score=626.31  Aligned_cols=423  Identities=57%  Similarity=0.917  Sum_probs=384.5

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      .+||||||||||+||++.+|.+++++|+.|++++||+|+|.+++++||..|+.+...+| ++++++||+||+++.     
T Consensus         3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~-----   76 (509)
T 2v7y_A            3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK-----   76 (509)
T ss_dssp             CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred             CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence            48999999999999999999999999999999999999998778999999999999999 999999999998542     


Q ss_pred             hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI  161 (549)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~  161 (549)
                                          +..+|  ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus        77 --------------------~~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~  134 (509)
T 2v7y_A           77 --------------------VEIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRI  134 (509)
T ss_dssp             --------------------EEETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             --------------------EEECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence                                12244  47899999999999999999999999999999999999999999999999999


Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE  241 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~  241 (549)
                      ||++++++++||+|||++|++...  .+.++||||+||||||++++++.++ .++++++.++.++||.+||+.|++|+.+
T Consensus       135 AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~  211 (509)
T 2v7y_A          135 AGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVN  211 (509)
T ss_dssp             TTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred             cCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEEEEEcCC-eEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence            999999999999999999998764  6789999999999999999999888 9999999999999999999999999999


Q ss_pred             HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431         242 EFKRKCR--------------SASDVGD----------------------------------------------------  255 (549)
Q Consensus       242 ~~~~~~~--------------~~~e~~K----------------------------------------------------  255 (549)
                      +|+++++              .+||++|                                                    
T Consensus       212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~  291 (509)
T 2v7y_A          212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQ  291 (509)
T ss_dssp             HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHH
T ss_pred             HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence            9876543              4556555                                                    


Q ss_pred             -------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccc
Q psy3431         256 -------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPL  317 (549)
Q Consensus       256 -------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~  317 (549)
                             .+.+|+.|           |++.|++.| +..+..+.||++|||+|||++|+.+++.    .+++.+.|++|+
T Consensus       292 ~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~  366 (509)
T 2v7y_A          292 ALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPL  366 (509)
T ss_dssp             HHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSS
T ss_pred             HHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeecc
Confidence                   11122222           999999999 5678889999999999999999999872    567889999999


Q ss_pred             cceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEE
Q psy3431         318 SLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD  397 (549)
Q Consensus       318 ~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~  397 (549)
                      +||+++.+|.+.+|||+|+++|++++..|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|+
T Consensus       367 slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~  446 (509)
T 2v7y_A          367 SLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFD  446 (509)
T ss_dssp             EEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEE
T ss_pred             ccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         398 LDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       398 ~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      +|.||+|+|++.+..||+...++|++. .+||++|+++++++++++..+|+..+++.++||+||
T Consensus       447 id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e  509 (509)
T 2v7y_A          447 IDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD  509 (509)
T ss_dssp             ECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred             EcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence            999999999999999999999999988 779999999999999999999999999999999987

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...

Probab=100.00  E-value=8.2e-54  Score=445.24  Aligned_cols=299  Identities=80%  Similarity=1.196  Sum_probs=275.4

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      |++||||||||||+||++.+|.+++++|+.|++++||+|+|.++++++|..|+.++.++|.++++++||++|+.++++.+
T Consensus        23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~  102 (404)
T 3i33_A           23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV  102 (404)
T ss_dssp             CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred             CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA  160 (549)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~  160 (549)
                      +...+.+||.+...++.+.+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++
T Consensus       103 ~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~  182 (404)
T 3i33_A          103 QSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGT  182 (404)
T ss_dssp             HHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             HHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            99999999999988899999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCC--CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLK--GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH  238 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~--~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~  238 (549)
                      .||++++.+++||+|||++|+......  .+..+||||+||||+|++++++.++ .++++++.++..+||.+||+.|.++
T Consensus       183 ~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~l~~~  261 (404)
T 3i33_A          183 ITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSH  261 (404)
T ss_dssp             HHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred             HcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC-eEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            999999999999999999998876533  6789999999999999999999988 9999999999999999999999999


Q ss_pred             HHHHHHhccc--------------cccccCC-------------------------------------------------
Q psy3431         239 LAEEFKRKCR--------------SASDVGD-------------------------------------------------  255 (549)
Q Consensus       239 l~~~~~~~~~--------------~~~e~~K-------------------------------------------------  255 (549)
                      +.++|+.+++              .+||++|                                                 
T Consensus       262 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~  341 (404)
T 3i33_A          262 LAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKA  341 (404)
T ss_dssp             HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998876543              4566655                                                 


Q ss_pred             ------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcC
Q psy3431         256 ------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG  300 (549)
Q Consensus       256 ------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~  300 (549)
                            ...+|+.|           |++.|++.|++.++..+.||++|||+|||++|+++++
T Consensus       342 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~  403 (404)
T 3i33_A          342 LRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG  403 (404)
T ss_dssp             HHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred             HHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence                  11222222           9999999998888999999999999999999999876

>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}

Probab=100.00  E-value=1.4e-50  Score=421.43  Aligned_cols=297  Identities=29%  Similarity=0.473  Sum_probs=257.4

Q ss_pred             CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      |.+||||||||||+||++.+|.+++++|+.|++++||+|+|.++++++|..|..+..++|.++++++|+++|+.++++.+
T Consensus        13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~   92 (409)
T 4gni_A           13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP   92 (409)
T ss_dssp             CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred             CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence            36999999999999999999999999999999999999999999999999999999999999999999999999887765


Q ss_pred             HhhcccCCeEEeecCCCceEEEEEc----CceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVNDRSKPKIQVEFK----GERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATK  156 (549)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~  156 (549)
                      +..  .+++.+...++.+.+.+...    ++...++|+++++++|++|++.++.+++.++.++|||||++|++.||++++
T Consensus        93 ~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~  170 (409)
T 4gni_A           93 THN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALI  170 (409)
T ss_dssp             GGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred             hhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence            543  33444455667777766654    355799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCceeEeecchhHHHHhhhccc-CCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         157 DAGAIAGLNVMRIVNEPTAAALAYGLDK-NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       157 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~-~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      +|++.|||+++.+++||+|||++|+... ....+..+||||+||||+|++++++.++ .++++++.++..+||.+||+.|
T Consensus       171 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~i  249 (409)
T 4gni_A          171 AAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSG-MYTILATVHDYEYHGIALDKVL  249 (409)
T ss_dssp             HHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEESSSSHHHHHHHH
T ss_pred             HHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCC-eEEEEEecCCCCcCHHHHHHHH
Confidence            9999999999999999999999998875 2346889999999999999999999998 9999999999999999999999


Q ss_pred             HHHHHHHHHhccc----------------cccccCC--------------------------------------------
Q psy3431         236 VSHLAEEFKRKCR----------------SASDVGD--------------------------------------------  255 (549)
Q Consensus       236 ~~~l~~~~~~~~~----------------~~~e~~K--------------------------------------------  255 (549)
                      ++++.++|..+++                .+||++|                                            
T Consensus       250 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~  329 (409)
T 4gni_A          250 IDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNR  329 (409)
T ss_dssp             HHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHH
Confidence            9999999986543                3677777                                            


Q ss_pred             -----------CCCChHHH-----------HHHHHHhhhCCC-CC------CCCCChhhHHHccHHHHHHHHcC
Q psy3431         256 -----------HHGDAHFV-----------VQSLLQNFFCGK-SL------NLSINPDEAVAYGAAVQAAILSG  300 (549)
Q Consensus       256 -----------~~~~i~~V-----------i~~~l~~~f~~~-~~------~~~~~~~eava~Gaa~~a~~l~~  300 (549)
                                 ...+|+.|           |++.|++.|+.. .+      ..++||++|||+|||++|+....
T Consensus       330 ~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~  403 (409)
T 4gni_A          330 LVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE  403 (409)
T ss_dssp             HHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence                       11223333           999999999654 34      67899999999999999998754

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1

Probab=100.00  E-value=1.9e-48  Score=401.99  Aligned_cols=291  Identities=57%  Similarity=0.896  Sum_probs=253.7

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .+||||||||||+||++.+|.+++++|+.|++++||+|+|.+ +++++|..|+.+..++|.++++++|++||+.++++.+
T Consensus         3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~   82 (383)
T 1dkg_D            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV   82 (383)
T ss_dssp             CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred             cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence            489999999999999999999999999999999999999975 5789999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +...+.+||.+.. .++...+.+  +|  ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus        83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~  158 (383)
T 1dkg_D           83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG  158 (383)
T ss_dssp             HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred             HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            9888899999874 455555444  55  589999999999999999999999989999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee----CCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID----EGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      +.||++++.+++||+|||++|+.... ..+..+||||+||||+|++++++.    ++ .++++++.++..+||.+||+.|
T Consensus       159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv~~~~~~~~~~-~~~v~~~~~~~~lGG~~id~~l  236 (383)
T 1dkg_D          159 RIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRL  236 (383)
T ss_dssp             HHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEEEEEEC----C-CCEEEEEEEESSCSHHHHHHHH
T ss_pred             HHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEEEEEEecCCCC-eEEEEEEeCCCCCCHHHHHHHH
Confidence            99999999999999999999987643 357899999999999999999997    56 7889998898999999999999


Q ss_pred             HHHHHHHHHhccc--------------cccccCC----------------------------------------------
Q psy3431         236 VSHLAEEFKRKCR--------------SASDVGD----------------------------------------------  255 (549)
Q Consensus       236 ~~~l~~~~~~~~~--------------~~~e~~K----------------------------------------------  255 (549)
                      .+++.++|..+++              .+||++|                                              
T Consensus       237 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i  316 (383)
T 1dkg_D          237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS  316 (383)
T ss_dssp             HHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence            9999998865432              3444444                                              


Q ss_pred             -------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         256 -------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       256 -------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                                   ...+|+.|           |++.|++.| +.++..+.||++|||+|||++|++|+
T Consensus       317 ~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~  383 (383)
T 1dkg_D          317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT  383 (383)
T ss_dssp             HHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence                         11222222           999999999 56788899999999999999998764

>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A

Probab=100.00  E-value=9.8e-42  Score=318.38  Aligned_cols=215  Identities=47%  Similarity=0.728  Sum_probs=205.7

Q ss_pred             EEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCC
Q psy3431         310 LLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGV  389 (549)
Q Consensus       310 ~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~  389 (549)
                      ++.|++|+||||++.+|.|.+|||||++||++++.+|+|..|||+.+.|+||||++..+.+|..||+|.|.|+||+|+|.
T Consensus         2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~   81 (219)
T 4e81_A            2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM   81 (219)
T ss_dssp             CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred             eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHH
Q psy3431         390 PKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQ  469 (549)
Q Consensus       390 ~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~  469 (549)
                      ++|+|+|.+|.||+|+|++.+..||+...++|.+. .+||++|+++|+++++++..+|++.|++.++||.||+|+|.+|+
T Consensus        82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~  160 (219)
T 4e81_A           82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK  160 (219)
T ss_dssp             SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999886 56999999999999999999999999999999999999999999


Q ss_pred             HhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431         470 ALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG  528 (549)
Q Consensus       470 ~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e  528 (549)
                      .|.+...++++++++.+...+.++++||+++   +.++|++++++|++.+.||..|+++
T Consensus       161 ~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~  216 (219)
T 4e81_A          161 QVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  216 (219)
T ss_dssp             HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred             HHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9987447899999999999999999999986   7899999999999999999999876

>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1

Probab=100.00  E-value=1.1e-38  Score=301.11  Aligned_cols=215  Identities=32%  Similarity=0.524  Sum_probs=204.4

Q ss_pred             EEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCe
Q psy3431         312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPK  391 (549)
Q Consensus       312 ~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~  391 (549)
                      .|++|++|||++.+|.|.+|||+|++||++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.|+|++|+|.++
T Consensus         1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~   80 (227)
T 1u00_A            1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH   80 (227)
T ss_dssp             CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred             CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431         392 IDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL  471 (549)
Q Consensus       392 i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l  471 (549)
                      |+|+|.+|.||+|+|++.+..||+...++|... .+||++++++++++++++..+|+..+++.++||+||+|+|.+|+.|
T Consensus        81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l  159 (227)
T 1u00_A           81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL  159 (227)
T ss_dssp             EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999887 5699999999999999999999999999999999999999999999


Q ss_pred             hhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         472 DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       472 ~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      .+...++++++++.+...|+++++||+.+   +.++|++++++|++++.||..|++.++
T Consensus       160 ~~~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~  215 (227)
T 1u00_A          160 AADAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS  215 (227)
T ss_dssp             HHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            87447899999999999999999999954   689999999999999999999876543

>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}

Probab=100.00  E-value=9e-35  Score=262.05  Aligned_cols=165  Identities=54%  Similarity=0.874  Sum_probs=154.7

Q ss_pred             cceeEEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCC
Q psy3431         306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPA  385 (549)
Q Consensus       306 ~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~  385 (549)
                      ...+.+.|++|++|||++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+
T Consensus        17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~   96 (182)
T 3n8e_A           17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA   96 (182)
T ss_dssp             -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred             CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHH
Q psy3431         386 PRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVF  465 (549)
Q Consensus       386 ~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy  465 (549)
                      |+|.++|+|+|.+|.||+|+|++.+++||++..++|.+. .+||++|+++|+++++++.++|++.+++.++||.||+|+|
T Consensus        97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy  175 (182)
T 3n8e_A           97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH  175 (182)
T ss_dssp             CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988 8899999999999999999999999999999999999999


Q ss_pred             HHHHHh
Q psy3431         466 NVKQAL  471 (549)
Q Consensus       466 ~~r~~l  471 (549)
                      .+|+.|
T Consensus       176 ~~~~~l  181 (182)
T 3n8e_A          176 DTETKM  181 (182)
T ss_dssp             CCSCCC
T ss_pred             HHHHhh
Confidence            998765

>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A

Probab=100.00  E-value=4.1e-32  Score=238.69  Aligned_cols=151  Identities=65%  Similarity=1.038  Sum_probs=146.7

Q ss_pred             EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431         311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP  390 (549)
Q Consensus       311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~  390 (549)
                      +.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus         2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~   81 (152)
T 3h0x_A            2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP   81 (152)
T ss_dssp             -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred             ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      +|+|+|.+|.||+|+|++.+..||+...++|.+....||++|+++|++++++|..+|+..+++.++||+||
T Consensus        82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le  152 (152)
T 3h0x_A           82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE  152 (152)
T ss_dssp             CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred             eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999987889999999999999999999999999999999986

>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}

Probab=99.98  E-value=2.9e-32  Score=239.15  Aligned_cols=151  Identities=69%  Similarity=1.117  Sum_probs=142.4

Q ss_pred             EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431         311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP  390 (549)
Q Consensus       311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~  390 (549)
                      +.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus         2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~   81 (152)
T 3dob_A            2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP   81 (152)
T ss_dssp             --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred             ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      +|+|+|.+|.||+|+|++.++.||+...++|.+....||++|+++|+++++++.++|+..+++.++||+||
T Consensus        82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le  152 (152)
T 3dob_A           82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE  152 (152)
T ss_dssp             CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred             eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999887789999999999999999999999999999999875

>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}

Probab=99.97  E-value=4.8e-32  Score=237.45  Aligned_cols=150  Identities=59%  Similarity=0.935  Sum_probs=144.6

Q ss_pred             EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431         311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP  390 (549)
Q Consensus       311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~  390 (549)
                      +.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus         2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~   81 (151)
T 3dqg_A            2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP   81 (151)
T ss_dssp             --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred             cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      +|+|+|.+|.||+|+|++.++.||++..++|.+. .+||++|+++|+++++++.++|+..+++.++||+||
T Consensus        82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e  151 (151)
T 3dqg_A           82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE  151 (151)
T ss_dssp             CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred             EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999988 899999999999999999999999999999999875

>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A

Probab=99.97  E-value=2.1e-31  Score=270.41  Aligned_cols=242  Identities=28%  Similarity=0.381  Sum_probs=176.7

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC--c-eEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP   78 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~   78 (549)
                      .+|||||||+||++++..++  .++       .+||+|+|..+  . .++|.+|+.+..++|.++...            
T Consensus         4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------   62 (344)
T 1jce_A            4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------   62 (344)
T ss_dssp             CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred             ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence            58999999999999875443  222       37999999875  3 479999998877777664310            


Q ss_pred             HHHhhcccCCeEEeecCCCceEEEEEcCceeee-CHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431          79 KIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTF-APEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~  157 (549)
                              +|+.    +          |....+ .++++++++|++++..  ..++  ...+|||||++|++.||+++++
T Consensus        63 --------~p~~----~----------g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~  116 (344)
T 1jce_A           63 --------RPMR----D----------GVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILD  116 (344)
T ss_dssp             --------CCEE----T----------TEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHH
T ss_pred             --------ecCC----C----------CeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHH
Confidence                    1221    1          100112 3566777777665542  1233  4789999999999999999999


Q ss_pred             HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHH
Q psy3431         158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS  237 (549)
Q Consensus       158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~  237 (549)
                      |++.||++++.+++||+|||++|+....  .+..++|||+||||||+++++...  .+    ..++..+||.+||+.|.+
T Consensus       117 a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lVvDiGggttdvsv~~~~~--~~----~~~~~~lGG~~id~~l~~  188 (344)
T 1jce_A          117 AGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMVVDIGGGTTEVAVISLGS--IV----TWESIRIAGDEMDEAIVQ  188 (344)
T ss_dssp             HHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEEEEECSSCEEEEEEETTE--EE----EEEEESCSHHHHHHHHHH
T ss_pred             HHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEEEEeCCCeEEEEEEEcCC--EE----eeCCCCccChhHHHHHHH
Confidence            9999999999999999999999987643  567899999999999999998632  22    235688999999999999


Q ss_pred             HHHHHHHhccc-cccccCC------------------------------------------------------------C
Q psy3431         238 HLAEEFKRKCR-SASDVGD------------------------------------------------------------H  256 (549)
Q Consensus       238 ~l~~~~~~~~~-~~~e~~K------------------------------------------------------------~  256 (549)
                      ++.++++.... ..||++|                                                            .
T Consensus       189 ~l~~~~~~~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~  268 (344)
T 1jce_A          189 YVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKT  268 (344)
T ss_dssp             HHHHHHCEECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHhCcccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99876542211 1111111                                                            1


Q ss_pred             C----CC-h-HHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         257 H----GD-A-HFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       257 ~----~~-i-~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                      .    .+ + +.|           |++.|++.| +.++..+.||+++||+||+++|+.++
T Consensus       269 ~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~  327 (344)
T 1jce_A          269 PPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN  327 (344)
T ss_dssp             CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred             CchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence            1    01 1 233           899999999 45677788999999999999998654

>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}

Probab=99.96  E-value=1.1e-29  Score=224.79  Aligned_cols=151  Identities=60%  Similarity=0.989  Sum_probs=145.5

Q ss_pred             EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431         311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP  390 (549)
Q Consensus       311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~  390 (549)
                      +.|++|++||+++.+|.|.+|||+|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|+|.+
T Consensus         2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~   81 (152)
T 2op6_A            2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP   81 (152)
T ss_dssp             -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred             ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      +|+|+|.+|.||+|+|++.+..+|+...++|.+....||+++++++++++++|..+|+..+++.++||+||
T Consensus        82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e  152 (152)
T 2op6_A           82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE  152 (152)
T ss_dssp             CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred             eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999886779999999999999999999999999999999875

>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1

Probab=99.91  E-value=8.9e-24  Score=181.66  Aligned_cols=119  Identities=62%  Similarity=0.949  Sum_probs=109.7

Q ss_pred             cceeEEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCC
Q psy3431         306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPA  385 (549)
Q Consensus       306 ~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~  385 (549)
                      .+++.+.|++|++||+++.+|.|.+|||||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.
T Consensus        14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~   93 (135)
T 1q5l_A           14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA   93 (135)
T ss_dssp             -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred             eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeEEEEEEeCCCccEEEEEEecCCCCceeEEEecC
Q psy3431         386 PRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKND  424 (549)
Q Consensus       386 ~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~  424 (549)
                      |+|.++|+|+|++|.||+|+|++.++.||++..++|++.
T Consensus        94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~  132 (135)
T 1q5l_A           94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS  132 (135)
T ss_dssp             CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred             CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence            999999999999999999999999999999999999876

>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*

Probab=99.88  E-value=1.5e-23  Score=211.85  Aligned_cols=133  Identities=20%  Similarity=0.138  Sum_probs=103.1

Q ss_pred             eeCHHHHHHHHHHHHHHHHHHHhCCCcceEE--EEecCCCCHHHHHHHHHHHHHc--------C------CceeEeecch
Q psy3431         110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAV--ITVPAYFNDAQRQATKDAGAIA--------G------LNVMRIVNEP  173 (549)
Q Consensus       110 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~v--itVPa~f~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep  173 (549)
                      .+.++...++++..|+..++...+.+ .++|  |+||++|+..||+++++|+..+        |      ++.+.+++||
T Consensus        94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep  172 (346)
T 2fsj_A           94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG  172 (346)
T ss_dssp             CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred             cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence            34557777788877776652222333 5699  9999999999999999998776        4      3568999999


Q ss_pred             hHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHh
Q psy3431         174 TAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR  245 (549)
Q Consensus       174 ~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~  245 (549)
                      +|||++|....... ...+++|||+||||||++++++.++ . .+.+..++..+||.+|++.|.+++.+++..
T Consensus       173 ~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g-~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~  243 (346)
T 2fsj_A          173 VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDM-E-PVVELSFSLQIGVGDAISALSRKIAKETGF  243 (346)
T ss_dssp             HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTT-E-ECGGGCEEESCCHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCC-E-EEeecCCCcchhHHHHHHHHHHHHHHHhCC
Confidence            99999882221122 3478999999999999999998777 5 556556778999999999999999988765

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}

Probab=99.78  E-value=8.2e-19  Score=171.52  Aligned_cols=168  Identities=24%  Similarity=0.365  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431         114 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL  193 (549)
Q Consensus       114 ~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl  193 (549)
                      .+....+|+++++.++...+.....+++|+|++|+..+|++++++++.+|+++..++.||+|++++|+..       ..+
T Consensus        70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~  142 (272)
T 3h1q_A           70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGI  142 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEE
Confidence            4556788899999999888888899999999999999999999999999999999999999999988753       259


Q ss_pred             EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH------HHHHhccc--------------ccc--
Q psy3431         194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA------EEFKRKCR--------------SAS--  251 (549)
Q Consensus       194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~------~~~~~~~~--------------~~~--  251 (549)
                      |+|+||||++++++.  .+ ...   ......+||.+||+.|.+++.      ++++.++.              ..+  
T Consensus       143 viDiGggst~~~~~~--~g-~~~---~~~~~~~Gg~~~~~~l~~~l~~~~~~ae~~k~~~~~~~~~~~~~~~~~~~i~~~  216 (272)
T 3h1q_A          143 VVDIGGGTTGIAVIE--KG-KIT---ATFDEPTGGTHLSLVLAGSYKIPFEEAETIKKDFSRHREIMRVVRPVIEKMALI  216 (272)
T ss_dssp             EEEECSSCEEEEEEE--TT-EEE---EECCBSCCHHHHHHHHHHHHTCCHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcEEEEEEE--CC-EEE---EEecCCCcHHHHHHHHHHHhCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999986  34 322   335689999999999998873      22222211              000  


Q ss_pred             --ccCCCCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHH
Q psy3431         252 --DVGDHHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA  295 (549)
Q Consensus       252 --e~~K~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a  295 (549)
                        +.++...+++.|           +++.+++.| +.++..+.||++++|+|||++|
T Consensus       217 i~~~l~~~~~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a~Gaal~a  272 (272)
T 3h1q_A          217 VKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTPLGIALFG  272 (272)
T ss_dssp             HHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred             HHHHHHhcCCCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHHHHHHhcC
Confidence              001111124444           899999999 6778889999999999999864

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...

Probab=99.74  E-value=8.5e-18  Score=171.90  Aligned_cols=186  Identities=15%  Similarity=0.177  Sum_probs=119.2

Q ss_pred             CEEEEEcCccceEEEEEECCeEE-EEeCCCCCcccee-EEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVE-IIANDQGNRTTPS-YVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~-ii~~~~g~~~~Ps-~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      ..|+||+||+++++++..++.|. ++++--|....++ .+.+.....++|++|....    ..  ..+            
T Consensus         6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~------------   67 (375)
T 2fxu_A            6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL------------   67 (375)
T ss_dssp             CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE------------
T ss_pred             ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce------------
Confidence            57999999999999987665543 3333222222221 1122223567888886541    00  000            


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCC--cceEEEEecCCCCHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHS--VRDAVITVPAYFNDAQRQATKD  157 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~~~vitVPa~f~~~qr~~l~~  157 (549)
                            .+|+.              .|  .... -+.+..+++++..   +.++..  ...++||+|++++..+|+++.+
T Consensus        68 ------~~Pi~--------------~G--~i~d-~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e  121 (375)
T 2fxu_A           68 ------KYPIE--------------HG--IITN-WDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQ  121 (375)
T ss_dssp             ------ECSEE--------------TT--EECC-HHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHH
T ss_pred             ------ecccc--------------CC--cccC-HHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHH
Confidence                  11211              11  1111 1233444444432   233322  3469999999999999998887


Q ss_pred             HH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHH
Q psy3431         158 AG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV  236 (549)
Q Consensus       158 Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~  236 (549)
                      ++ +.+|++.+.+++||+|||++|+.       .+.+|+|+|+||||++.+.  +| . .+........+||++||+.|.
T Consensus       122 ~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G-~-~~~~~~~~~~~GG~~lt~~l~  190 (375)
T 2fxu_A          122 IMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EG-Y-ALPHAIMRLDLAGRDLTDYLM  190 (375)
T ss_dssp             HHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TT-E-ECGGGCEEESCCHHHHHHHHH
T ss_pred             HHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CC-E-EeccceEEeccCHHHHHHHHH
Confidence            65 77899999999999999999875       3679999999999987764  45 3 233334457899999999999


Q ss_pred             HHHHHH
Q psy3431         237 SHLAEE  242 (549)
Q Consensus       237 ~~l~~~  242 (549)
                      ++|..+
T Consensus       191 ~~l~~~  196 (375)
T 2fxu_A          191 KILTER  196 (375)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998754

>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}

Probab=99.73  E-value=1.1e-18  Score=179.06  Aligned_cols=200  Identities=16%  Similarity=0.189  Sum_probs=133.1

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHHh
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQ   82 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~   82 (549)
                      ++|||+||+++++++.++|.+.+  +..|...+||.+.            +.....++..+...+|+++++.      ..
T Consensus        15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~------~~   74 (377)
T 2ych_A           15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEA------RT   74 (377)
T ss_dssp             CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHH------TC
T ss_pred             eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHc------CC
Confidence            78999999999999887666443  2234445555321            1223346777888888888751      00


Q ss_pred             hcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHH-----------
Q psy3431          83 DMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ-----------  151 (549)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~q-----------  151 (549)
                      ..+..   .+.-.+...+......  ..++++++...    ++..++.+++.++.+++|.+|.  .+.+           
T Consensus        75 ~~~~v---~~~i~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v  143 (377)
T 2ych_A           75 RKRYV---VTALSNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQV  143 (377)
T ss_dssp             CCCEE---EEEECGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEE
T ss_pred             CcceE---EEEecCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEE
Confidence            01111   1111221111111111  35778887653    3446777888899999999983  2222           


Q ss_pred             ---------HHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecC
Q psy3431         152 ---------RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAG  222 (549)
Q Consensus       152 ---------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~  222 (549)
                               .+++++|++.|||++..++.||+|||++|+.......+..++|+|+||||||+++++.  | .+.   ..+
T Consensus       144 ~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g-~~~---~~~  217 (377)
T 2ych_A          144 MVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--D-KPL---AVR  217 (377)
T ss_dssp             EEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--T-EEE---EEE
T ss_pred             EEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--C-EEE---EEE
Confidence                     3889999999999999999999999999875433234677999999999999999973  4 322   234


Q ss_pred             CCCCCcchHHHHHHHHH
Q psy3431         223 DTHLGGEDFDNRLVSHL  239 (549)
Q Consensus       223 d~~lGG~~iD~~l~~~l  239 (549)
                      +..+||.+||+.|.+.+
T Consensus       218 ~~~~GG~~i~~~i~~~~  234 (377)
T 2ych_A          218 VLTLSGKDFTEAIARSF  234 (377)
T ss_dssp             EESCSHHHHHHHHHHHT
T ss_pred             eeechHHHHHHHHHHHh
Confidence            57899999999998743

>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A

Probab=99.73  E-value=2.9e-18  Score=171.58  Aligned_cols=178  Identities=17%  Similarity=0.205  Sum_probs=116.2

Q ss_pred             eeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCC-CCHH--HH--HHHHH--------H----HHHcCCceeEeec
Q psy3431         109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAY-FNDA--QR--QATKD--------A----GAIAGLNVMRIVN  171 (549)
Q Consensus       109 ~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~-f~~~--qr--~~l~~--------A----a~~AGl~~~~li~  171 (549)
                      ..+++..+++.+ ..|+. +  .......++|+++|.. |...  ||  .++.+        +    ++.+++..+.+++
T Consensus        72 ~~~~~~~l~~i~-~aL~~-~--~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~  147 (320)
T 2zgy_A           72 WQYSDVNVVAVH-HALLT-S--GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP  147 (320)
T ss_dssp             GGGSHHHHHHHH-HHHHH-H--SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred             ccchHHHHHHHH-HHHHH-c--CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence            467777777654 44442 1  1111224699999987 6531  21  11211        1    2345567899999


Q ss_pred             chhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH-----------
Q psy3431         172 EPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA-----------  240 (549)
Q Consensus       172 Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~-----------  240 (549)
                      ||.||+++|...  ...+..++|+|+||||+|+++++  ++ .+.+....++..+||.+||+.|.+++.           
T Consensus       148 e~~aa~~~~~~~--~~~~~~~~vvDiGggttd~~v~~--~g-~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i~~~~a  222 (320)
T 2zgy_A          148 ESIPAGYEVLQE--LDELDSLLIIDLGGTTLDISQVM--GK-LSGISKIYGDSSLGVSLVTSAVKDALSLARTKGSSYLA  222 (320)
T ss_dssp             SSHHHHHHHHHH--SCTTCEEEEEEECSSCEEEEEEE--GG-GCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGGGHHHH
T ss_pred             CcHHHHHhhhcc--ccCCCCEEEEEcCCCeEEEEEEe--CC-eeEEeeecCCccccHHHHHHHHHHHHHHcCCCCCHHHH
Confidence            999999988743  23567999999999999999998  34 445666677789999999999999983           


Q ss_pred             HHH-Hhccc--------------------------c----ccccCCCCCChHHH---------HHHHHHhhhCCC--CCC
Q psy3431         241 EEF-KRKCR--------------------------S----ASDVGDHHGDAHFV---------VQSLLQNFFCGK--SLN  278 (549)
Q Consensus       241 ~~~-~~~~~--------------------------~----~~e~~K~~~~i~~V---------i~~~l~~~f~~~--~~~  278 (549)
                      +++ +....                          +    ..+.++...+++.|         +++.|++.|+..  ++.
T Consensus       223 e~~lk~~~~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~~~~~~vvl~GGga~ll~~~l~~~~~~~~~~~~  302 (320)
T 2zgy_A          223 DDIIIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFF  302 (320)
T ss_dssp             HHHHHTTTCHHHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEESTTHHHHHHHHHHTSCCCGGGEE
T ss_pred             HHHHHHhhhhhcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEECChHHHHHHHHHHHhCCCCCcee
Confidence            222 11100                          0    00000011233333         888899988532  467


Q ss_pred             CCCChhhHHHccHHHHH
Q psy3431         279 LSINPDEAVAYGAAVQA  295 (549)
Q Consensus       279 ~~~~~~eava~Gaa~~a  295 (549)
                      ...||++|+|+||++++
T Consensus       303 ~~~~P~~a~A~G~~~~~  319 (320)
T 2zgy_A          303 KTNNSQYDLVNGMYLIG  319 (320)
T ss_dssp             CCSCGGGHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHhc
Confidence            78999999999999875

>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A

Probab=99.69  E-value=1.2e-16  Score=133.45  Aligned_cols=101  Identities=43%  Similarity=0.841  Sum_probs=75.5

Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHhhhc--cCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Q psy3431         449 KQKERISARNNLEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKM  526 (549)
Q Consensus       449 ~~~~~~~a~N~LE~~iy~~r~~l~~~--~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~  526 (549)
                      ++|++.++||+||+|||.++..|.+.  ..++++++++.|...++++.+||+.+.+++.++|+.++++|++.+.||..|+
T Consensus         3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~   82 (113)
T 3lof_A            3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL   82 (113)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999763  2789999999999999999999999888899999999999999999999999


Q ss_pred             hcCCCCCCCCCC-------C-CCCCCCCCCC
Q psy3431         527 HGGAGGASAGDM-------P-RGGPTVEEVD  549 (549)
Q Consensus       527 ~e~~~~~~~~~~-------~-~~~~~~~~~~  549 (549)
                      ++.+|+++.+||       + ..||+|||||
T Consensus        83 y~~~~~~~~~~~~~~~~~~~~~~gp~~eevd  113 (113)
T 3lof_A           83 YQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD  113 (113)
T ss_dssp             HHC----------------------------
T ss_pred             HHhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            986442222222       1 2489999998

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A

Probab=99.69  E-value=6.2e-17  Score=168.13  Aligned_cols=104  Identities=16%  Similarity=0.129  Sum_probs=82.6

Q ss_pred             cceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHh-hhcccCCCCCceEEEEEcCCCceeeeEEEeeCCc
Q psy3431         136 VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALA-YGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGA  213 (549)
Q Consensus       136 ~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~  213 (549)
                      ...++||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |........+.+.+|+|+|+||||++++.  .| 
T Consensus       107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G-  183 (418)
T 1k8k_A          107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EG-  183 (418)
T ss_dssp             GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TT-
T ss_pred             CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CC-
Confidence            457999999999999999999999 88999999999999999987 42111101122679999999999999985  34 


Q ss_pred             EEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         214 LFEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       214 ~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                      . .+.....+..+||++||+.|.++|.+++
T Consensus       184 ~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~  212 (418)
T 1k8k_A          184 Y-VIGSCIKHIPIAGRDITYFIQQLLRDRE  212 (418)
T ss_dssp             E-ECGGGCEEESCSHHHHHHHHHHHHHTTC
T ss_pred             E-EcccceEEEeCcHHHHHHHHHHHHHhcC
Confidence            3 2333335578999999999999988654

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A

Probab=99.55  E-value=5.2e-15  Score=144.72  Aligned_cols=131  Identities=15%  Similarity=0.084  Sum_probs=96.6

Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      .++...+..|+||+|+++++.+..+    ....|+|+|||+++++++. .+| .++.....++...|+.+|++.+.++|.
T Consensus        68 ~a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~~g-~~~~~~~~~~~~~g~G~f~d~~a~~l~  141 (276)
T 4ehu_A           68 MNYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-NNG-RLLNFLMNDKCAAGTGRFLDVMAKIIE  141 (276)
T ss_dssp             GGCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-TTS-CEEEEEEECSCSTTSHHHHHHHHHHHT
T ss_pred             HHhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-ecC-ceEEEEeCCCcCcchhhHHHHHHHHhc
Confidence            4667788999999999988766543    3457899999999999885 455 788888888899999999999998876


Q ss_pred             HHHHhccccccccCC----------------------CCC-------------------------ChHHH----------
Q psy3431         241 EEFKRKCRSASDVGD----------------------HHG-------------------------DAHFV----------  263 (549)
Q Consensus       241 ~~~~~~~~~~~e~~K----------------------~~~-------------------------~i~~V----------  263 (549)
                      -.+..... ....++                      ...                         .++.|          
T Consensus       142 ~~~~~~~~-~~~~a~~~~~i~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~~~~~~vvl~GGva~n~  220 (276)
T 4ehu_A          142 VDVSELGS-ISMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRIGVQRNVVMVGGVARNS  220 (276)
T ss_dssp             CCGGGHHH-HHTTCSSCCCCCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSEEEESGGGGCH
T ss_pred             cChhhhHH-HHhcCCCCCCcCCccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhcccCCeEEEecCccchH
Confidence            44432111 011111                      001                         11111          


Q ss_pred             -HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         264 -VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       264 -i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                       |++.+++.| +.++..+.+|++++|+|||++|....
T Consensus       221 ~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~  256 (276)
T 4ehu_A          221 GIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA  256 (276)
T ss_dssp             HHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence             999999999 67888899999999999999997544

>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}

Probab=99.53  E-value=9.5e-15  Score=122.98  Aligned_cols=100  Identities=39%  Similarity=0.704  Sum_probs=72.4

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHhhh--ccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy3431         450 QKERISARNNLEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH  527 (549)
Q Consensus       450 ~~~~~~a~N~LE~~iy~~r~~l~~--~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~  527 (549)
                      +|++.++||+||+|||.++..|.+  ....+++++++.|...+.++.+||+++.+++.++|+.++++|++++.||..|++
T Consensus        13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y   92 (120)
T 2p32_A           13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY   92 (120)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999976  237899999999999999999999976678999999999999999999999998


Q ss_pred             cCCCCCCCC------CCCCCCCCCCCCC
Q psy3431         528 GGAGGASAG------DMPRGGPTVEEVD  549 (549)
Q Consensus       528 e~~~~~~~~------~~~~~~~~~~~~~  549 (549)
                      ..+|+..++      |++..||+|+|||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~ee~d  120 (120)
T 2p32_A           93 QSAGGAPPGAAPGGAAGGAGGPTIEEVD  120 (120)
T ss_dssp             CC--------------------------
T ss_pred             HhccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            643321111      1223479999998

>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1

Probab=99.46  E-value=5.9e-14  Score=117.17  Aligned_cols=96  Identities=36%  Similarity=0.754  Sum_probs=69.8

Q ss_pred             HHHHhhhHHHHHHHHHHHhhh--ccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         453 RISARNNLEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       453 ~~~a~N~LE~~iy~~r~~l~~--~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      +.++||+||+|||.++..|.+  ....+++++++.|...+.++.+||+++.+++.++|++++++|++++.||..|+++..
T Consensus         2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~   81 (113)
T 1ud0_A            2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA   81 (113)
T ss_dssp             --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred             hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            467899999999999999973  237899999999999999999999865557889999999999999999999998653


Q ss_pred             CCCCCCCC--------------CCCCCCCCCCC
Q psy3431         531 GGASAGDM--------------PRGGPTVEEVD  549 (549)
Q Consensus       531 ~~~~~~~~--------------~~~~~~~~~~~  549 (549)
                      ++ ++++|              +..||+|+|||
T Consensus        82 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ee~d  113 (113)
T 1ud0_A           82 GG-MPGGMPGGFPGGGAPPSGGASSGPTIEEVD  113 (113)
T ss_dssp             CC-CCCC--------------------------
T ss_pred             cC-CCCCCCCCCCCcccCCCCCCCCCCCcccCC
Confidence            32 22221              12478999997

>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*

Probab=99.40  E-value=1e-12  Score=135.36  Aligned_cols=83  Identities=10%  Similarity=0.003  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcc
Q psy3431         150 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE  229 (549)
Q Consensus       150 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~  229 (549)
                      ...+.+.+|++.|||++..++.||.|||++|.....  .+..++++|+||||||+++++  +| .+..   .++..+||.
T Consensus       168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~--~~~gv~vvDiGggttdisi~~--~g-~~~~---~~~i~~GG~  239 (419)
T 4a2a_A          168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE--KDRGVVVVNLGYNFTGLIAYK--NG-VPIK---ISYVPVGMK  239 (419)
T ss_dssp             HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH--HHHCEEEEEECSSSEEEEEEE--TT-EEEE---EEEESCCHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc--ccCCEEEEEECCCcEEEEEEE--CC-EEEE---EEecccHHH
Confidence            456789999999999999999999999998864422  456799999999999999987  45 4332   335789999


Q ss_pred             hHHHHHHHHHH
Q psy3431         230 DFDNRLVSHLA  240 (549)
Q Consensus       230 ~iD~~l~~~l~  240 (549)
                      +||+.|...+.
T Consensus       240 ~it~dIa~~l~  250 (419)
T 4a2a_A          240 HVIKDVSAVLD  250 (419)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHC
Confidence            99999998664

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*

Probab=99.38  E-value=4.8e-14  Score=144.80  Aligned_cols=95  Identities=16%  Similarity=0.210  Sum_probs=35.4

Q ss_pred             ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEE
Q psy3431         137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF  215 (549)
Q Consensus       137 ~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~  215 (549)
                      ..++||+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++.       .+.+|+|+|+|||+++.+.  .| ..
T Consensus       105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~--~G-~~  174 (394)
T 1k8k_B          105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY--EG-FS  174 (394)
T ss_dssp             --------------------------------------------------------CCEEEECSSCEEEECEE--TT-EE
T ss_pred             CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE--CC-EE
Confidence            45899999999999999998865 77899999999999999988875       3569999999999998774  34 22


Q ss_pred             EEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         216 EVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       216 ~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                       +........+||+++|+.|.++|..+
T Consensus       175 -~~~~~~~~~~GG~~lt~~l~~~l~~~  200 (394)
T 1k8k_B          175 -LPHLTRRLDIAGRDITRYLIKLLLLR  200 (394)
T ss_dssp             -CSTTCEEESCCHHHHHHHHHHHHHHT
T ss_pred             -cccceEEeeccHHHHHHHHHHHHHhc
Confidence             21112336899999999999998764

>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}

Probab=99.36  E-value=9.9e-13  Score=132.52  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=78.2

Q ss_pred             ceEEEEecCCCCHHHH-HHHHHHHHHcCC------------ceeEeecchhHHHHhhhcccCCC----CCceEEEEEcCC
Q psy3431         137 RDAVITVPAYFNDAQR-QATKDAGAIAGL------------NVMRIVNEPTAAALAYGLDKNLK----GERNVLIFDLGG  199 (549)
Q Consensus       137 ~~~vitVPa~f~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~----~~~~vlv~D~Gg  199 (549)
                      ..+++.+|..+...+| +++++++..++-            ..+.+++||.||+++++......    .+..++|+|+||
T Consensus       114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg  193 (355)
T 3js6_A          114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS  193 (355)
T ss_dssp             EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred             EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence            4789999999888887 589999886543            57899999999999997654211    478899999999


Q ss_pred             CceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         200 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       200 gt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                      ||+|++++.  ++ .+ +...++...+||..+++.+.+++.+++
T Consensus       194 gTtd~~v~~--~~-~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~  233 (355)
T 3js6_A          194 GTTIIDTYQ--NM-KR-VEEESFVINKGTIDFYKRIASHVSKKS  233 (355)
T ss_dssp             SCEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHHHTC---
T ss_pred             CcEEEEEEc--CC-EE-ccccccCcchHHHHHHHHHHHHHHHhc
Confidence            999999993  44 22 111233467999999999999998874

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}

Probab=99.19  E-value=3.4e-12  Score=127.54  Aligned_cols=156  Identities=12%  Similarity=0.070  Sum_probs=106.4

Q ss_pred             cceEEEEecCCCCH--HHHHHHHHHHHHc--------C------CceeEeecchhHHHHhhhcccCCCCCceEEEEEcCC
Q psy3431         136 VRDAVITVPAYFND--AQRQATKDAGAIA--------G------LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGG  199 (549)
Q Consensus       136 ~~~~vitVPa~f~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gg  199 (549)
                      ...+++++|..+..  .+|+.+++....-        |      +..+.+++||.+|.+.+.   .......++|+|+||
T Consensus       105 ~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~~~~~v~vvDiGg  181 (329)
T 4apw_A          105 KVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENFKNKNVAVIDFGG  181 (329)
T ss_dssp             EEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCCTTCEEEEEEECS
T ss_pred             eEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhhccCCEEEEEeCC
Confidence            35789999976653  4677777766621        1      245788999998886652   123578999999999


Q ss_pred             CceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH-HHHhccc-cccccCCC---------------------
Q psy3431         200 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE-EFKRKCR-SASDVGDH---------------------  256 (549)
Q Consensus       200 gt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~-~~~~~~~-~~~e~~K~---------------------  256 (549)
                      ||+|++++.  ++ .+ +....+...+||..+++.+.+++.. ++....+ ..+|++|.                     
T Consensus       182 gTtd~~v~~--~g-~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~~~~e~i~~~g~~~~g~~~~~~~~~~i~~~  257 (329)
T 4apw_A          182 LNMGFSLYR--NC-VV-NPSERFIEEHGVKDLIIRVGDALTDLNNGNLITNEQAESALNNGYMKKGGEIDTESSTVIKKV  257 (329)
T ss_dssp             SCEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTSBTTTTCSSSCSSCEECTTCCSTTHHHHHH
T ss_pred             CcEEEEEEE--CC-EE-eeccccchhhHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHhcCCcccCCcchhHHHHHHHHH
Confidence            999999998  34 32 2223345779999999999998887 5544333 34444430                     


Q ss_pred             ------------------CCChHHH---------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         257 ------------------HGDAHFV---------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       257 ------------------~~~i~~V---------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                                        ++.++.|         +.+.|++.|+ ..+....||..|+|+|+..++....
T Consensus       258 ~~e~~~~I~~~i~~~~~~~~~~~~IvltGGGA~l~~~~l~~~~~-~~v~v~~~P~~a~a~G~~~~~~~k~  326 (329)
T 4apw_A          258 KEKFLKDAIKLIEKRGFKLDQLDSLIFIGGTTQKLKEQISKTYP-NNSIITNNSQWTTCEGLYKVAVAKY  326 (329)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHST-TCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHccEEEEECChHHHHHHHHHHHcC-CCCEecCCChhhHHHHHHHHHhhhh
Confidence                              1111111         6777777774 3456678999999999998876543

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}

Probab=99.04  E-value=6.9e-10  Score=115.60  Aligned_cols=178  Identities=14%  Similarity=0.168  Sum_probs=118.3

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC----ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCC
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT----ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDD   77 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~   77 (549)
                      ..|+||+||.++++++..++.|.        ..+||+|+....    ..++|++|....   +.+  .            
T Consensus        24 ~~iVID~GS~~~kaG~ag~~~P~--------~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--l------------   78 (498)
T 3qb0_A           24 SAVVIDPGSYTTNIGYSGSDFPQ--------SILPSVYGKYTADEGNKKIFSEQSIGIP---RKD--Y------------   78 (498)
T ss_dssp             SCEEEECCSSEEEEEETTCSSCS--------EEEESEEEEESSCSSCCEECCTTGGGSC---CTT--E------------
T ss_pred             CeEEEECCCcEEEEEECCCCCee--------eecCceeEEeccCCCccEEEecHHHhcC---cCc--e------------
Confidence            46899999999999987655442        246999988543    467787532210   000  0            


Q ss_pred             hHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCC--Ccc-eEEEEecCCCCHHHHHH
Q psy3431          78 PKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGH--SVR-DAVITVPAYFNDAQRQA  154 (549)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~--~~~-~~vitVPa~f~~~qr~~  154 (549)
                            .-.+|+.              .|   .+.-=+.+..+++|+...   .++.  ... .++||.|+......|+.
T Consensus        79 ------~l~~Pi~--------------~G---vI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~  132 (498)
T 3qb0_A           79 ------ELKPIIE--------------NG---LVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKK  132 (498)
T ss_dssp             ------EEEESEE--------------TT---EESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHH
T ss_pred             ------EEeccCc--------------CC---EEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHH
Confidence                  0001110              12   222234445555555432   2332  223 58999999999999999


Q ss_pred             HHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHH
Q psy3431         155 TKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDN  233 (549)
Q Consensus       155 l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~  233 (549)
                      +.+.+ +.+|++.+.++.+|.+|+++++..       +-||+|+|+|+++++.+.  .| .. +.....-..+||+++|+
T Consensus       133 ~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~--~G-~~-l~~ai~rl~vgG~~lt~  201 (498)
T 3qb0_A          133 SLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIV--DG-MT-LSKSTRRNFIAGKFINH  201 (498)
T ss_dssp             HHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEE--TT-EE-CGGGCEEESCSHHHHHH
T ss_pred             HHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEe--CC-EE-ccccceeccccHHHHHH
Confidence            99975 779999999999999999887652       249999999999999985  34 11 11111125799999999


Q ss_pred             HHHHHHHH
Q psy3431         234 RLVSHLAE  241 (549)
Q Consensus       234 ~l~~~l~~  241 (549)
                      .|.++|.+
T Consensus       202 ~L~~lL~~  209 (498)
T 3qb0_A          202 LIKKALEP  209 (498)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHHHHh
Confidence            99999864

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.83  E-value=5.9e-09  Score=107.36  Aligned_cols=103  Identities=17%  Similarity=0.146  Sum_probs=78.7

Q ss_pred             ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcE
Q psy3431         137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGAL  214 (549)
Q Consensus       137 ~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~  214 (549)
                      ..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+...... ...+-||+|+|+|+|+++.+.  .| .
T Consensus       124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G-~  200 (427)
T 3dwl_A          124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EG-Y  200 (427)
T ss_dssp             CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TT-E
T ss_pred             CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CC-E
Confidence            47899999999999999999988 6899999999999999998887542211 145689999999999999984  24 1


Q ss_pred             EEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431         215 FEVRSTAGDTHLGGEDFDNRLVSHLAEEF  243 (549)
Q Consensus       215 ~~v~~~~~d~~lGG~~iD~~l~~~l~~~~  243 (549)
                      . +........+||+++|+.|.++|..+.
T Consensus       201 ~-l~~~~~rl~~gG~~lt~~L~~lL~~~~  228 (427)
T 3dwl_A          201 V-IGSSIKTMPLAGRDVTYFVQSLLRDRN  228 (427)
T ss_dssp             E-CGGGCEEESCCHHHHHHHHHHTTC---
T ss_pred             E-ehhhheeccccHHHHHHHHHHHHHHcC
Confidence            1 111111257999999999999887665

>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}

Probab=98.59  E-value=5.4e-07  Score=97.47  Aligned_cols=118  Identities=17%  Similarity=0.263  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHH-HHHhCCCcc-----eEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccC
Q psy3431         113 PEEISSMVLTKMKETA-EAYLGHSVR-----DAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKN  185 (549)
Q Consensus       113 ~~~v~~~~L~~l~~~a-~~~~~~~~~-----~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~  185 (549)
                      ..+.... +..|++++ ...++-...     .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|..  
T Consensus       170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~--  246 (593)
T 4fo0_A          170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS--  246 (593)
T ss_dssp             HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred             hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence            3444433 33444444 345665443     4999999999999999887765 456999999999999999887653  


Q ss_pred             CCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         186 LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       186 ~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                           +-+|+|+|.+.|.|+-|.  +| .. +....-...+||.++++.|.++|..+
T Consensus       247 -----tglVVDiG~~~T~v~PV~--dG-~~-l~~~~~rl~~GG~~lt~~L~~lL~~~  294 (593)
T 4fo0_A          247 -----STCIVDVGDQKTSVCCVE--DG-VS-HRNTRLCLAYGGSDVSRCFYWLMQRA  294 (593)
T ss_dssp             -----EEEEEEECSSCEEEEEEE--SS-CB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred             -----ceEEEEeCCCceeeeeeE--CC-EE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence                 569999999999988775  23 11 11111125799999999999888754

>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*

Probab=98.00  E-value=1.9e-05  Score=83.36  Aligned_cols=96  Identities=16%  Similarity=0.300  Sum_probs=77.4

Q ss_pred             ceEEEEecCCCCHHHHHHHHHHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEE
Q psy3431         137 RDAVITVPAYFNDAQRQATKDAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF  215 (549)
Q Consensus       137 ~~~vitVPa~f~~~qr~~l~~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~  215 (549)
                      ..+++|.|+.++...|+.|.+.+- ..|++.+.++.+|.+|++++|.      ..+-||+|+|+|+|+++.+.  .| . 
T Consensus       222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~--eG-~-  291 (655)
T 4am6_A          222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD--EG-T-  291 (655)
T ss_dssp             CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE--TT-E-
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe--CC-E-
Confidence            469999999999999999999885 5899999999999999987764      24579999999999999884  34 1 


Q ss_pred             EEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431         216 EVRSTAGDTHLGGEDFDNRLVSHLAEE  242 (549)
Q Consensus       216 ~v~~~~~d~~lGG~~iD~~l~~~l~~~  242 (549)
                      -+.....-..+||++++..|.++|..+
T Consensus       292 vl~~ai~rL~iGG~dLT~yL~kLL~~r  318 (655)
T 4am6_A          292 VLEHSAITLDYGGDDITRLFALFLLQS  318 (655)
T ss_dssp             ECGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred             EEhhheeeecchHHHHHHHHHHHHHHc
Confidence            111111125799999999999998865

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5

Probab=97.54  E-value=0.004  Score=59.69  Aligned_cols=34  Identities=26%  Similarity=0.162  Sum_probs=27.6

Q ss_pred             HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431         264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL  298 (549)
Q Consensus       264 i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l  298 (549)
                      +++.+.+.+ +.++..+.+++.+.|+|||++|...
T Consensus       224 ~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~  257 (270)
T 1hux_A          224 VRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK  257 (270)
T ss_dssp             HHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence            778888888 5667777778889999999999764

>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*

Probab=97.29  E-value=0.0014  Score=64.23  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=49.7

Q ss_pred             HHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHH
Q psy3431         153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFD  232 (549)
Q Consensus       153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD  232 (549)
                      ..+..+-+..|+++-.|=.|.+|...+.+...........+|+|+|||||.+++.+  ++ .+.  . ..+-.+|+..+.
T Consensus       101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~-~~~--~-~~Sl~~G~v~l~  174 (315)
T 1t6c_A          101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GY-KVR--E-VISLPIGIVNLT  174 (315)
T ss_dssp             HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TT-EEE--E-EEEECCCHHHHH
T ss_pred             HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CC-cee--e-EEEEeccHHHHH
Confidence            34455555789987655566666655444443322356799999999999999975  34 321  1 122678888877


Q ss_pred             HHH
Q psy3431         233 NRL  235 (549)
Q Consensus       233 ~~l  235 (549)
                      +.+
T Consensus       175 e~~  177 (315)
T 1t6c_A          175 ETF  177 (315)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            665

>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A

Probab=97.29  E-value=0.00024  Score=72.89  Aligned_cols=83  Identities=19%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CHHHHHHHHHHHHHc-CC--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCC
Q psy3431         148 NDAQRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT  224 (549)
Q Consensus       148 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~  224 (549)
                      ...+-+.+.+|.+.+ |+  .+-.  -||.||+++......  .+..++++||||||||++++.-..-  .....    .
T Consensus       366 ~~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE--~eLGvaiIDmGGGTTd~sVf~~G~l--v~a~~----i  435 (610)
T 2d0o_A          366 DRLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG--TTRPLAILDLGAGSTDASIINPKGD--IIATH----L  435 (610)
T ss_dssp             SCCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECTTCC--EEEEE----E
T ss_pred             CHHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCcE--EEEEE----e
Confidence            344577889999999 99  6666  999999998876543  6778999999999999999964322  22212    4


Q ss_pred             CCCcchHHHHHHHHHH
Q psy3431         225 HLGGEDFDNRLVSHLA  240 (549)
Q Consensus       225 ~lGG~~iD~~l~~~l~  240 (549)
                      ..||.+++..|..-|.
T Consensus       436 p~gG~~VT~DIA~~Lg  451 (610)
T 2d0o_A          436 AGAGDMVTMIIARELG  451 (610)
T ss_dssp             ECSHHHHHHHHHHHHT
T ss_pred             ccchHHHHHHHHHHhC
Confidence            5899999988876554

>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6

Probab=97.09  E-value=0.00033  Score=72.05  Aligned_cols=80  Identities=18%  Similarity=0.103  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHc-CC--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCC
Q psy3431         151 QRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG  227 (549)
Q Consensus       151 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lG  227 (549)
                      +-+.+.+|.+.+ |+  .+-.  -||.||+++......  .+..++++||||||||++++.-..-  .....    ...|
T Consensus       371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE--~elGvaiIDmGgGTTd~sVf~~g~l--v~a~~----ip~g  440 (607)
T 1nbw_A          371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG--CAAPLAILDLGAGSTDAAIVNAEGQ--ITAVH----LAGA  440 (607)
T ss_dssp             CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECSSSC--EEEEE----EECC
T ss_pred             HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCcE--EEEEE----eccc
Confidence            345688888888 99  5545  899999988866533  6778999999999999999974332  22211    4589


Q ss_pred             cchHHHHHHHHHH
Q psy3431         228 GEDFDNRLVSHLA  240 (549)
Q Consensus       228 G~~iD~~l~~~l~  240 (549)
                      |.+++..|..-|.
T Consensus       441 G~~VT~DIA~~Lg  453 (607)
T 1nbw_A          441 GNMVSLLIKTELG  453 (607)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHhC
Confidence            9999988876554

>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}

Probab=96.40  E-value=0.016  Score=56.76  Aligned_cols=76  Identities=18%  Similarity=0.298  Sum_probs=45.4

Q ss_pred             HHHHHHHHHcCCceeEeecchhHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchH
Q psy3431         153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF  231 (549)
Q Consensus       153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~i  231 (549)
                      ..+..+-+..|+++--|=.|-+|.-.+.+...... .....+|+|+|||+|.+++++  ++......+    -++|...+
T Consensus        93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~S----l~lG~vrl  166 (315)
T 3mdq_A           93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILWKQS----FEIGGQRL  166 (315)
T ss_dssp             HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEEEEE----ESCCHHHH
T ss_pred             HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEeeeEE----EechhhHH
Confidence            34555556679987444445555444334433222 246799999999999999986  231222112    56777766


Q ss_pred             HHH
Q psy3431         232 DNR  234 (549)
Q Consensus       232 D~~  234 (549)
                      .+.
T Consensus       167 ~e~  169 (315)
T 3mdq_A          167 IDR  169 (315)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}

Probab=95.09  E-value=0.14  Score=50.52  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=46.6

Q ss_pred             HHHHHHHHHcCCceeEeecchhHHHHhh-hcccCCC---CCceEEEEEcCCCceeeeEEEeeCCcE-EEEEEecCCCCCC
Q psy3431         153 QATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLK---GERNVLIFDLGGGTFDVSILSIDEGAL-FEVRSTAGDTHLG  227 (549)
Q Consensus       153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~---~~~~vlv~D~Gggt~dvsv~~~~~~~~-~~v~~~~~d~~lG  227 (549)
                      ..+..+-+..|+++ .+|+-.+=|.+.| +......   .....+++|+||||++++++.-..+.. -.+.. .....+|
T Consensus       106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~-~~SlplG  183 (343)
T 3cer_A          106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQG-AFSMNIG  183 (343)
T ss_dssp             HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSE-EEEESCC
T ss_pred             HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccce-eEEEehh
Confidence            34555555679886 5666555555444 4333222   235699999999999999975410100 00001 1125688


Q ss_pred             cchHHHHH
Q psy3431         228 GEDFDNRL  235 (549)
Q Consensus       228 G~~iD~~l  235 (549)
                      +..+.+.+
T Consensus       184 ~v~lt~~~  191 (343)
T 3cer_A          184 SVRMTERH  191 (343)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            88777654

>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*

Probab=94.71  E-value=0.11  Score=54.43  Aligned_cols=75  Identities=19%  Similarity=0.279  Sum_probs=45.9

Q ss_pred             HHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHH
Q psy3431         154 ATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFD  232 (549)
Q Consensus       154 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD  232 (549)
                      .+..+-+..|+++ .+|+-.+=|.+.| |...........+|+|+|||+|.+++.+  ++ .+.  ... .-.+|...+.
T Consensus       101 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~-~~~--~~~-Sl~lG~vrlt  173 (513)
T 1u6z_A          101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NF-EPI--LVE-SRRMGCVSFA  173 (513)
T ss_dssp             HHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TT-EEE--EEE-EESCCHHHHH
T ss_pred             HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CC-eee--EEE-EEeccHHHHH
Confidence            3444445568886 5666555554444 4433332223799999999999999874  34 221  111 2578888876


Q ss_pred             HHH
Q psy3431         233 NRL  235 (549)
Q Consensus       233 ~~l  235 (549)
                      +.+
T Consensus       174 e~f  176 (513)
T 1u6z_A          174 QLY  176 (513)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A

Probab=93.88  E-value=0.43  Score=44.74  Aligned_cols=22  Identities=27%  Similarity=0.381  Sum_probs=18.7

Q ss_pred             CCEEEEEcCccceEEEEEECCe
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQGK   22 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g~   22 (549)
                      |+.+.||.|+|++++|++.++.
T Consensus         3 ~M~L~IDIGNT~ik~gl~~~~~   24 (249)
T 3bex_A            3 PMYLLVDVGNTHSVFSITEDGK   24 (249)
T ss_dssp             CEEEEEEECSSEEEEEEESSSS
T ss_pred             ceEEEEEECCCeEEEEEEECCE
Confidence            3689999999999999987554

>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}

Probab=93.43  E-value=0.44  Score=46.08  Aligned_cols=45  Identities=24%  Similarity=0.290  Sum_probs=29.4

Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      ..|++ +.+.|+..|||++-.........++++++-+|.| .-.+++
T Consensus        97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii  141 (302)
T 3vov_A           97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV  141 (302)
T ss_dssp             HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred             hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence            34665 5899999999987644332234567788888877 334444

>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}

Probab=92.75  E-value=0.6  Score=44.15  Aligned_cols=21  Identities=24%  Similarity=0.336  Sum_probs=19.2

Q ss_pred             CEEEEEcCccceEEEEEECCe
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGK   22 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~   22 (549)
                      +.++||+|+|+++++++.++.
T Consensus         3 MlL~IDIGNT~iK~gl~d~~~   23 (266)
T 3djc_A            3 LILCIDVGNSHIYGGVFDGDE   23 (266)
T ss_dssp             CEEEEEECSSEEEEEEEETTE
T ss_pred             eEEEEEECCCeEEEEEEECCE
Confidence            689999999999999998775

>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*

Probab=92.21  E-value=0.81  Score=44.58  Aligned_cols=45  Identities=27%  Similarity=0.316  Sum_probs=30.8

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS  208 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~  208 (549)
                      .|++ +.+.|+..|+|++..........++++++-+|.| .-..++.
T Consensus        96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~  140 (321)
T 3vgl_A           96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII  140 (321)
T ss_dssp             HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred             hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence            4776 6899999999987544322234567888888887 5555553

>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}

Probab=91.22  E-value=1.3  Score=43.22  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=30.3

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|+|++-.........++++++-+|.| +-.+++
T Consensus       120 ~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii  163 (327)
T 4db3_A          120 IGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLI  163 (327)
T ss_dssp             HSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence            4776 6899999999987654433234577888888877 444444

>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}

Probab=90.47  E-value=1.7  Score=41.75  Aligned_cols=44  Identities=25%  Similarity=0.308  Sum_probs=29.1

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|+|++-.........++++++-+|.| +-.+++
T Consensus        97 ~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv  140 (297)
T 4htl_A           97 TGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIF  140 (297)
T ss_dssp             HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred             HCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEE
Confidence            4776 6899999999987544322234566788888876 334444

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*

Probab=89.96  E-value=6.7  Score=38.23  Aligned_cols=82  Identities=5%  Similarity=0.007  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH-h-CC-CcceEEEEecCCCCHHHHHHHHHHHHHc-C--CceeEeecchhHHHHhhhcccCC
Q psy3431         113 PEEISSMVLTKMKETAEAY-L-GH-SVRDAVITVPAYFNDAQRQATKDAGAIA-G--LNVMRIVNEPTAAALAYGLDKNL  186 (549)
Q Consensus       113 ~~~v~~~~L~~l~~~a~~~-~-~~-~~~~~vitVPa~f~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y~~~~~~  186 (549)
                      ++++...+...+.+..+.. . .. ++..+.|++|...+......+.+..+.. |  .-.+.+.|+..|||+++ .  . 
T Consensus        45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~-  120 (347)
T 2ch5_A           45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P-  120 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S-
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C-
Confidence            3444444444444433332 1 12 5778999999999877666666666554 3  13578999999999883 2  1 


Q ss_pred             CCCceEEEEEcCCCc
Q psy3431         187 KGERNVLIFDLGGGT  201 (549)
Q Consensus       187 ~~~~~vlv~D~Gggt  201 (549)
                         ...+++=+|.|.
T Consensus       121 ---~~~v~v~~GTGi  132 (347)
T 2ch5_A          121 ---DGGVVLISGTGS  132 (347)
T ss_dssp             ---SCEEEEEESSSE
T ss_pred             ---CCcEEEEEcCCc
Confidence               334555556654

>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8

Probab=89.33  E-value=0.25  Score=38.93  Aligned_cols=21  Identities=29%  Similarity=0.362  Sum_probs=18.8

Q ss_pred             CCEEEEEcCccceEEEEEECC
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQG   21 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g   21 (549)
                      |.++|||+|+..+.+|+..+.
T Consensus         1 mriLglD~G~kriGvAvsd~~   21 (98)
T 1iv0_A            1 MRVGALDVGEARIGLAVGEEG   21 (98)
T ss_dssp             CCEEEEEESSSEEEEEEECSC
T ss_pred             CcEEEEEeCCCEEEEEEEeCC
Confidence            789999999999999988654

>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*

Probab=89.31  E-value=3.1  Score=39.79  Aligned_cols=58  Identities=12%  Similarity=0.097  Sum_probs=38.1

Q ss_pred             cceEEEEecCCCCHH-HHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCc
Q psy3431         136 VRDAVITVPAYFNDA-QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT  201 (549)
Q Consensus       136 ~~~~vitVPa~f~~~-qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt  201 (549)
                      +..+.|++|.. +.. ....+.+..+..|+ .+.+.|+..|+|++-..      ...++++-+|.|.
T Consensus        60 ~~~igi~~~G~-~~~~~~~~l~~~l~~~~~-pv~v~ND~~aaa~~e~~------~~~~v~l~~GTG~  118 (299)
T 2e2o_A           60 ADVVGMGVAGL-DSKFDWENFTPLASLIAP-KVIIQHDGVIALFAETL------GEPGVVVIAGTGS  118 (299)
T ss_dssp             CSEEEEEETTC-CSHHHHHHHHHHHTTSSS-EEEEEEHHHHHHHHHHT------TSCEEEEEESSSE
T ss_pred             CCEEEEEcCCC-CchhHHHHHHHHHHhCCC-CEEEeCcHHHHHhhccC------CCCeEEEEecCCE
Confidence            56789999998 543 23344444433343 56888999999876432      3457777789884

>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}

Probab=87.92  E-value=2  Score=41.63  Aligned_cols=44  Identities=23%  Similarity=0.353  Sum_probs=29.8

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|+|++..........+.++++-+|.| +-..++
T Consensus       108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv  151 (326)
T 2qm1_A          108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIV  151 (326)
T ss_dssp             HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred             hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence            4665 6899999999987543322223567888888988 455555

>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}

Probab=87.69  E-value=1.4  Score=45.88  Aligned_cols=74  Identities=19%  Similarity=0.295  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcch
Q psy3431         152 RQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGED  230 (549)
Q Consensus       152 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~  230 (549)
                      ...+..+-+..|+++ .+|+-.+=|.+.| |....... ...+|+|+|||+|.+++++  ++ .+  .. ...-++|...
T Consensus       103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~--~~-~~--~~-~~Sl~lG~vr  174 (508)
T 3hi0_A          103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIK--DK-SC--GE-GITLPLGGLR  174 (508)
T ss_dssp             HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEE--TT-EE--CC-CEEESCCHHH
T ss_pred             HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEee--CC-ee--ee-EEEecceEEe
Confidence            334555556679987 5666554444443 44333322 2459999999999999986  33 22  11 1125678777


Q ss_pred             HHH
Q psy3431         231 FDN  233 (549)
Q Consensus       231 iD~  233 (549)
                      +.+
T Consensus       175 l~e  177 (508)
T 3hi0_A          175 LSE  177 (508)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            664

>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}

Probab=87.01  E-value=1.2  Score=43.24  Aligned_cols=43  Identities=21%  Similarity=0.331  Sum_probs=29.3

Q ss_pred             CCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         163 GLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       163 Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      |++ +.+.|+..|+|++-.........++++++-+|.| .-.+++
T Consensus       119 ~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii  161 (321)
T 3r8e_A          119 HIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVM  161 (321)
T ss_dssp             TSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred             CCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence            665 6899999999987544322234567888888887 444544

>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10

Probab=86.18  E-value=3.9  Score=39.67  Aligned_cols=44  Identities=20%  Similarity=0.257  Sum_probs=28.8

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++..........+.++++-+|.| .-.+++
T Consensus       120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv  163 (327)
T 2ap1_A          120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV  163 (327)
T ss_dssp             HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence            4665 6899999999987543222123467888888877 344444

>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10

Probab=85.27  E-value=3.6  Score=39.03  Aligned_cols=43  Identities=16%  Similarity=0.145  Sum_probs=29.7

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++.......... +++++-+|.| .-.+++
T Consensus        96 ~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii  138 (289)
T 2aa4_A           96 TNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVV  138 (289)
T ss_dssp             HCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEE
Confidence            4665 68999999999876443322234 8888999988 455555

>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10

Probab=84.56  E-value=1.9  Score=41.06  Aligned_cols=43  Identities=16%  Similarity=0.183  Sum_probs=28.8

Q ss_pred             HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      ..|++ +.+.|+..|||++... . ....++++++-+|.| .-.+++
T Consensus        93 ~~~~p-v~v~NDa~aaa~~e~~-~-~~~~~~~v~l~~GtG-iG~giv  135 (292)
T 2gup_A           93 SYQLP-VHLENDANCVGLSELL-A-HPELENAACVVIGTG-IGGAMI  135 (292)
T ss_dssp             GGCCC-EEEEEHHHHHHHHHHH-H-CTTCSSEEEEEESSS-EEEEEE
T ss_pred             HcCCC-EEEechHHHHHHHHHH-h-cCCCCeEEEEEECCc-eEEEEE
Confidence            34665 6899999999987644 1 123467788888877 334444

>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A

Probab=83.78  E-value=1.9  Score=44.14  Aligned_cols=56  Identities=11%  Similarity=-0.023  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHcCCc--eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431         150 AQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI  209 (549)
Q Consensus       150 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~  209 (549)
                      .-++.+.++...-|++  ++.++|+..|++++-...    ....++.+=+|-|+=-..+...
T Consensus       164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~----~~~~~iglilGTGvgg~~i~~~  221 (457)
T 2yhx_A          164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT----DAXIKMGIIFGSGVNAAYWCDS  221 (457)
T ss_dssp             SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEECG
T ss_pred             HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc----CCccEEEEEECcEEEEEEEECC
Confidence            4567777887666664  589999999999987663    2456676777888655555554

>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10

Probab=82.75  E-value=5.6  Score=40.25  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=29.3

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++............++++-+|.| .-.+++
T Consensus       208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv  251 (429)
T 1z05_A          208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV  251 (429)
T ss_dssp             HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred             hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence            4766 6899999999987543322224567788888877 445554

>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10

Probab=82.39  E-value=16  Score=34.11  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=28.4

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCC-ceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGE-RNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~-~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++.......... ..++++-+|.| .-.+++
T Consensus       114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv  158 (267)
T 1woq_A          114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI  158 (267)
T ss_dssp             HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence            4666 68999999999885433221222 35677778876 555554

>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}

Probab=82.32  E-value=8.3  Score=38.10  Aligned_cols=44  Identities=27%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             cCCceeEeecchhHHHHhhhccc-------------CCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDK-------------NLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~-------------~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|+|++-....             .....++++++-+|.| +-.+++
T Consensus       108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~giv  164 (366)
T 3mcp_A          108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVV  164 (366)
T ss_dssp             HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEE
Confidence            4776 689999999998754332             2234567888888765 344444

>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8

Probab=82.13  E-value=0.62  Score=39.83  Aligned_cols=20  Identities=35%  Similarity=0.544  Sum_probs=17.8

Q ss_pred             CCEEEEEcCccceEEEEEEC
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQ   20 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~   20 (549)
                      |.++|||+|+..+.+|+..+
T Consensus         3 mriLGiDpG~~riGvAv~d~   22 (150)
T 1vhx_A            3 LRILGLDLGTKTLGVALSDE   22 (150)
T ss_dssp             EEEEEEEECSSEEEEEEECT
T ss_pred             CEEEEEEccCCEEEEEEEEC
Confidence            67999999999999998764

>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*

Probab=81.99  E-value=4.1  Score=41.85  Aligned_cols=59  Identities=10%  Similarity=0.083  Sum_probs=44.0

Q ss_pred             CHHHHHHHHHHHHHcCCc--eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee
Q psy3431         148 NDAQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID  210 (549)
Q Consensus       148 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~  210 (549)
                      ...-.+.+.+|.+.-|++  ++.++|+.+|++++.++..    ...++.+=+|-|+=-+.+....
T Consensus       184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~~~  244 (485)
T 3o8m_A          184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDVVS  244 (485)
T ss_dssp             TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEEGG
T ss_pred             CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEeecc
Confidence            455677899999888886  4789999999999877652    3566666688887766666543

>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10

Probab=81.62  E-value=15  Score=36.28  Aligned_cols=42  Identities=14%  Similarity=0.208  Sum_probs=28.0

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++....... . ..++++-+|.| +-.+++
T Consensus       188 ~~~p-V~v~NDanaaalaE~~~g~~-~-~~~v~l~~GtG-iG~giv  229 (380)
T 2hoe_A          188 YGIE-VWVENDADMGAVGEKWYTKR-D-DSFAWILTGKG-IGAGII  229 (380)
T ss_dssp             HCSE-EEEEEHHHHHHHHHHHHTTC-C-SCEEEEEESSS-CEEEEE
T ss_pred             hCCC-EEEechHHHHHHHHHHhCCC-C-CcEEEEEeCCc-eEEEEE
Confidence            4765 68999999999875433221 2 67788888877 334444

>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A

Probab=80.03  E-value=9.5  Score=38.16  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=29.3

Q ss_pred             cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL  207 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~  207 (549)
                      .|++ +.+.|+..|||++............++++-+|.| .-.+++
T Consensus       186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv  229 (406)
T 1z6r_A          186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI  229 (406)
T ss_dssp             HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred             HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence            4665 6899999999987543322223467788888887 445555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	549
d1bupa1	185	c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas	4e-91
d1dkgd1	183	c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas	4e-83
d1yuwa1	159	b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus	8e-76
d1dkza2	118	b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI	5e-58
d1u00a2	115	b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6	2e-49
d1jcea1	137	c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB	1e-31
d1ud0a_	84	a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId:	2e-25
d1dkza1	97	a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId:	3e-25
d1dkgd2	198	c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP	4e-22
d1dkgd2	198	c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP	2e-10
d1bupa2	193	c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP	4e-21
d1bupa2	193	c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP	5e-11
d1u00a1	112	a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66)	1e-20
d2zgya2	163	c.55.1.1 (A:158-320) Plasmid segregation protein P	8e-12
d2fsja1	161	c.55.1.12 (A:165-325) Hypothetical protein Ta0583	4e-10
d1jcea2	196	c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre	2e-07
d1jcea2	196	c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre	4e-04

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  275 bits (704), Expect = 4e-91
 Identities = 152/183 (83%), Positives = 168/183 (91%)

Query: 2   PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
           PA+GIDLG+TYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 
Sbjct: 2   PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61

Query: 62  NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
           NTVFDAKRLIGR+FDD  +Q DMKHWPF VVND  +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62  NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 121

Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
           TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181

Query: 182 LDK 184
           LDK
Sbjct: 182 LDK 184

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score =  254 bits (650), Expect = 4e-83
 Identities = 107/183 (58%), Positives = 130/183 (71%), Gaps = 4/183 (2%)

Query: 4   IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
           IGIDLGTT SCVA+       ++ N +G+RTTPS +A+T D E L+G  AK Q   NP+N
Sbjct: 3   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 62

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
           T+F  KRLIGR+F D ++Q+D+   PF ++         VE KG  +  AP +IS+ VL 
Sbjct: 63  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG--QKMAPPQISAEVLK 119

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
           KMK+TAE YLG  V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 120 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 179

Query: 183 DKN 185
           DK 
Sbjct: 180 DKG 182

>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  234 bits (599), Expect = 8e-76
 Identities = 119/159 (74%), Positives = 143/159 (89%)

Query: 303 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 362
           S  +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1   SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60

Query: 363 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 422
           GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK   ITI 
Sbjct: 61  GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120

Query: 423 NDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461
           NDKGRLSKE+I+RM+ +AE+YK EDEKQ++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159

>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Escherichia coli [TaxId: 562]

 Score =  187 bits (475), Expect = 5e-58
 Identities = 76/118 (64%), Positives = 91/118 (77%)

Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
           VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T  DNQ AV+I V +GER   
Sbjct: 1   VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60

Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
            DN  LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK   G
Sbjct: 61  ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118

>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: Chaperone protein hscA (Hsc66)
species: Escherichia coli [TaxId: 562]

 Score =  164 bits (415), Expect = 2e-49
 Identities = 55/114 (48%), Positives = 74/114 (64%)

Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
           DV PLSLG+ET GG++ K+I RNT IP  + Q FTT+ D Q A++I V +GER + +D  
Sbjct: 2   DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61

Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
            L  F L GIP  P G   I VTF +DA+G+L+VTA + S+G   +I +K   G
Sbjct: 62  SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115

>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

 Score =  117 bits (293), Expect = 1e-31
 Identities = 37/181 (20%), Positives = 62/181 (34%), Gaps = 45/181 (24%)

Query: 3   AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
            IGIDLGT  + V +  +G V    +     +T   +        +G  AKN +   P  
Sbjct: 2   DIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEI------LKVGLEAKNMIGKTPAT 55

Query: 63  TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
                           +  +D     +                          ++ ++L 
Sbjct: 56  IKAI------------RPMRDGVIADY-------------------------TVALVMLR 78

Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
                A+  +       VI VP    D +R+A  DAG  AG + + ++ EP AAA+  G 
Sbjct: 79  YFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAI--GS 136

Query: 183 D 183
           +
Sbjct: 137 N 137

>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.5 bits (243), Expect = 2e-25
 Identities = 27/83 (32%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 456 ARNNLEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 513
             + LE+Y FN+K  ++D     K+ + +K +  ++C+  + WLD N  A+KEE++ + +
Sbjct: 2   GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61

Query: 514 QLQKSCMPLMSKMHGGAGGASAG 536
           +L+K C P+++K++  AGG   G
Sbjct: 62  ELEKVCNPIITKLYQSAGGMPGG 84

>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: DnaK
species: Escherichia coli [TaxId: 562]

 Score = 97.5 bits (243), Expect = 3e-25
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 428 LSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCR 487
           L+++EI +M+ DAE   + D K +E +  RN  +  + + ++ +++AG+KL   +K+   
Sbjct: 1   LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60

Query: 488 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 523
               A    L      DK   + K+Q+L +    LM
Sbjct: 61  SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score = 91.9 bits (228), Expect = 4e-22
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 3/62 (4%)

Query: 188 GERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 244
           G R + ++DLGGGTFD+SI+ IDE      FEV +T GDTHLGGEDFD+RL+++L EEFK
Sbjct: 1   GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60

Query: 245 RK 246
           + 
Sbjct: 61  KD 62

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score = 58.0 bits (140), Expect = 2e-10
 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 229 EDFDNRLVSHLAEEFKRKCRSA-SDVGDHHGDAHFV-----------VQSLLQNFFCGKS 276
              ++ LV  L        + A  D G    D   V           VQ  +  FF GK 
Sbjct: 118 AKLES-LVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKE 175

Query: 277 LNLSINPDEAVAYGAAVQAAILS 299
               +NPDEAVA GAAVQ  +L+
Sbjct: 176 PRKDVNPDEAVAIGAAVQGGVLT 198

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 89.3 bits (221), Expect = 4e-21
 Identities = 47/59 (79%), Positives = 54/59 (91%), Gaps = 1/59 (1%)

Query: 188 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRK 246
            ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H   EFKRK
Sbjct: 3   AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRK 60

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.6 bits (144), Expect = 5e-11
 Identities = 30/36 (83%), Positives = 32/36 (88%)

Query: 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299
           +Q LLQ+FF GK LN SINPDEAVAYGAAVQAAILS
Sbjct: 158 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 193

>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 112

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: Chaperone protein hscA (Hsc66)
species: Escherichia coli [TaxId: 562]

 Score = 85.0 bits (210), Expect = 1e-20
 Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 8/120 (6%)

Query: 428 LSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCR 487
           L+  EI  MI D+  Y ++D K +     +      + ++  AL      L+ +E+    
Sbjct: 1   LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60

Query: 488 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGGPTVEE 547
           +      +    +   D +  +  ++ + K      ++    +   +       G +V+E
Sbjct: 61  DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQSVRRAL-----KGHSVDE 112

>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

 Score = 61.4 bits (148), Expect = 8e-12
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
           + L    ++LI DLGG T D+S +    G L  +    GD+ LG     + +   L+   
Sbjct: 1   QELDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57

Query: 244 K 244
            
Sbjct: 58  T 58

>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 56.7 bits (136), Expect = 4e-10
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR 248
               ++ D+G  T DV  +++    +  V   +    +G  D  + L   +A+E      
Sbjct: 5   PGYGVVIDVGSRTTDVLTINL--MDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVP 62

Query: 249 SASD 252
               
Sbjct: 63  FDLA 66

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.1 bits (116), Expect = 2e-07
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
               ++ D+GGGT +V+++S+          T     + G++ D  +V +
Sbjct: 6   PSGNMVVDIGGGTTEVAVISLGSIV------TWESIRIAGDEMDEAIVQY 49

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.5 bits (91), Expect = 4e-04
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 8/101 (7%)

Query: 202 FDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRS-ASDVGDHH--- 257
             VS + +  G   ++    G+           +V  +    ++      SD+ +     
Sbjct: 84  TTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFL 143

Query: 258 ---GDAHFVVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 295
              G     + +LLQ    G S+  S  P  AVA GA +  
Sbjct: 144 TGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVL 183

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	549
d1bupa1	185	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	100.0
d1dkgd1	183	Heat shock protein 70kDa, ATPase fragment {Escheri	100.0
d1yuwa1	159	DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}	100.0
d1dkza2	118	DnaK {Escherichia coli [TaxId: 562]}	99.93
d1u00a2	115	Chaperone protein hscA (Hsc66) {Escherichia coli [	99.93
d1jcea1	137	Prokaryotic actin homolog MreB {Thermotoga maritim	99.89
d1bupa2	193	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	99.84
d1dkgd2	198	Heat shock protein 70kDa, ATPase fragment {Escheri	99.8
d1ud0a_	84	DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}	99.61
d1dkza1	97	DnaK {Escherichia coli [TaxId: 562]}	99.25
d1u00a1	112	Chaperone protein hscA (Hsc66) {Escherichia coli [	99.22
d1jcea2	196	Prokaryotic actin homolog MreB {Thermotoga maritim	99.16
d2zgya2	163	Plasmid segregation protein ParM {Escherichia coli	98.72
d2fsja1	161	Hypothetical protein Ta0583 {Archaeon Thermoplasma	98.15
d1e4ft2	191	Cell division protein FtsA {Thermotoga maritima [T	97.36
d1huxa_	259	Hydroxyglutaryl-CoA dehydratase component A {Acida	97.31
d2fxua1	140	Actin {Cow (Bos taurus) [TaxId: 9913]}	96.28
d2fsja2	164	Hypothetical protein Ta0583 {Archaeon Thermoplasma	96.17
d1k8ka1	158	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	95.81
d1e4ft1	193	Cell division protein FtsA {Thermotoga maritima [T	95.77
d2zgya1	157	Plasmid segregation protein ParM {Escherichia coli	92.75
d2ap1a2	117	Putative regulator protein YcfX {Salmonella typhim	92.39
d1zc6a1	114	Probable N-acetylglucosamine kinase CV2896 {Chromo	92.05
d1iv0a_	98	Hypothetical protein, YqgF homologue {Thermus ther	91.08
d1t6ca2	180	Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6	89.3
d1nbwa3	202	ATPase domain of the glycerol dehydratase reactiva	89.06
d2d0oa3	203	Diol dehydratase-reactivating factor large subunit	87.59
d1u6za3	177	Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5	87.13
d1vhxa_	140	Hypothetical protein YrrK (RuvX) {Bacillus subtili	86.41
d2aa4a1	119	N-acetylmannosamine kinase NanK {Escherichia coli	86.02
d2gupa1	114	Hypothetical protein SP2142 {Streptococcus pneumon	84.48
d2ch5a2	117	N-acetylglucosamine kinase, NAGK {Human (Homo sapi	83.37

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.5e-41  Score=306.38  Aligned_cols=183  Identities=83%  Similarity=1.266  Sum_probs=177.0

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ   81 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~   81 (549)
                      +|||||||||||+||++.+|++++++|++|+|.+||+|+|.++++++|..|..++.++|.++++++|||||+.+.++.++
T Consensus         2 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~~~r~~Ps~i~~~~~~~~vG~~a~~~~~~~p~~~i~~~KrllG~~~~~~~~~   81 (185)
T d1bupa1           2 PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ   81 (185)
T ss_dssp             CCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHTTTTTCGGGEECCHHHHTTCCTTCHHHH
T ss_pred             CEEEEEcChhcEEEEEEECCEEEEEECCCCCccceeEEEECCCcEEEeechHHHhhcCcccchhHHHHHhCCCCccHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431          82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI  161 (549)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~  161 (549)
                      ...+.+|+.+..+.+.....+.+.+....++|++|++++|++|++.++.+++.++.++|||||++|++.||++|++||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~el~a~~l~~l~~~a~~~~~~~~~~~VitvPa~f~~~qr~~~~~Aa~~  161 (185)
T d1bupa1          82 SDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTI  161 (185)
T ss_dssp             HHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HHhhcCCceEEcCCCCccEEEEEcCCceEEcHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            99999999999888888888988888899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCceeEeecchhHHHHhhhccc
Q psy3431         162 AGLNVMRIVNEPTAAALAYGLDK  184 (549)
Q Consensus       162 AGl~~~~li~Ep~Aaal~y~~~~  184 (549)
                      |||++++||+||+|||++|++++
T Consensus       162 AGl~~~~li~EP~AAAl~Ygldk  184 (185)
T d1bupa1         162 AGLNVLRIINEPTAAAIAYGLDK  184 (185)
T ss_dssp             TTCEEEEEEEHHHHHHHHTTTTS
T ss_pred             cCCCeEEEEcCHHHHHHHhcccC
Confidence            99999999999999999999875

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=100.00  E-value=3.5e-39  Score=294.23  Aligned_cols=180  Identities=59%  Similarity=0.924  Sum_probs=166.8

Q ss_pred             CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431           2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI   80 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~   80 (549)
                      .|||||||||||+||++.+|.+++++|++|++.+||+++|.++ .+++|..|..+..++|+++++++|||||+.+.++.+
T Consensus         1 ~VvGIDfGTt~s~va~~~~~~~~ii~n~~~~~~~ps~v~~~~~~~~~~G~~A~~~~~~~p~~~i~~~KrllG~~~~~~~~   80 (183)
T d1dkgd1           1 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV   80 (183)
T ss_dssp             CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred             CEEEEEcChhcEEEEEEECCEEEEEEcCCCcccccceeeecCCCCEEccHHHHHhhhcCCccEEeeeHHHcCCCCCcHHH
Confidence            3799999999999999999999999999999999999999865 899999999999999999999999999999999999


Q ss_pred             HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                      +.....+||.+.. +++..  .+...+  +.++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~r~~l~~Aa  156 (183)
T d1dkgd1          81 QRDVSIMPFKIIAADNGDA--WVEVKG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG  156 (183)
T ss_dssp             HHHTTTCSSEEEECSSSBE--EEEETT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred             HhhhhcCCEEEEEcCCCcE--EEEECC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            9999999999986 44444  344455  679999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhhhcccC
Q psy3431         160 AIAGLNVMRIVNEPTAAALAYGLDKN  185 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y~~~~~  185 (549)
                      ++|||++++||+||+|||++|++++.
T Consensus       157 ~~AG~~~~~li~EP~AAAl~Ygl~k~  182 (183)
T d1dkgd1         157 RIAGLEVKRIINEPTAAALAYGLDKG  182 (183)
T ss_dssp             HHTTCEESCCCBHHHHHHHHHTCCC-
T ss_pred             HHcCCCEEEEecCHHHHHHHhcccCC
Confidence            99999999999999999999998754

>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5e-34  Score=248.98  Aligned_cols=157  Identities=75%  Similarity=1.160  Sum_probs=152.7

Q ss_pred             ccceeEEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCC
Q psy3431         305 AIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPP  384 (549)
Q Consensus       305 ~~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~  384 (549)
                      .++++++.|++|+||||++.+|.|.+|||||++||++++..|+|..|+|+.+.|+||||++..+.+|.+||+|.|+|+|+
T Consensus         3 ~v~~~~l~DV~p~slGie~~gg~~~~iI~rnt~iP~~~~~~f~T~~d~Q~~v~i~i~qGe~~~~~~n~~lg~f~l~~ip~   82 (159)
T d1yuwa1           3 NVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPP   82 (159)
T ss_dssp             CTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCC
T ss_pred             ccceEEEEEecCCceEEEEcCCEEEEEEcCCcccceeeeEEEeeccCCCcEEEEEEEcCchhhccCccEEEEEEECCCCc
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431         385 APRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE  461 (549)
Q Consensus       385 ~~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  461 (549)
                      .|+|.++|.|+|.+|.||+|+|+|.+..||+...++|.+....|+++|+++++++++++..+|+..|++.++||.||
T Consensus        83 ~~~G~~~I~Vtf~id~nGil~V~A~d~~Tg~~~~i~I~~~~~~Ls~eEIek~i~eae~~~~eDe~~r~~ieakn~lE  159 (159)
T d1yuwa1          83 APRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE  159 (159)
T ss_dssp             CSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECS
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEEcCCCCeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999887789999999999999999999999999999999886

>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=4.5e-26  Score=187.74  Aligned_cols=115  Identities=64%  Similarity=1.001  Sum_probs=111.6

Q ss_pred             EEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCC
Q psy3431         310 LLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGV  389 (549)
Q Consensus       310 ~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~  389 (549)
                      .+.|++|++|||+..+|.|.+|||||++||+++++.|+|..|+|+.+.|++||||+..+.+|.+||+|.|+++|+.|+|.
T Consensus         2 ~l~DV~p~slGIe~~~g~~~~iI~rnt~iP~~~t~~f~T~~dnQ~~i~i~v~qGe~~~~~~n~~lg~~~i~~ip~~p~G~   81 (118)
T d1dkza2           2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNKSLGQFNLDGINPAPRGM   81 (118)
T ss_dssp             CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTC
T ss_pred             EEEeecCCceeEEEcCCEEEEEEeccccCCCcceEEEEcccCCCceEEEEEeeeeeccccCceEEEEEEEcCCccCCCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEEeCCCccEEEEEEecCCCCceeEEEecC
Q psy3431         390 PKIDVTFDLDANGILNVTAKDTSSGKSQNITIKND  424 (549)
Q Consensus       390 ~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~  424 (549)
                      ++|+|+|++|.||+|+|+|.+..||++..++|...
T Consensus        82 ~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~~~i~~~  116 (118)
T d1dkza2          82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS  116 (118)
T ss_dssp             SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcC
Confidence            99999999999999999999999999999998765

>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: Chaperone protein hscA (Hsc66)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.7e-25  Score=182.38  Aligned_cols=112  Identities=48%  Similarity=0.802  Sum_probs=109.7

Q ss_pred             EeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeE
Q psy3431         313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKI  392 (549)
Q Consensus       313 d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i  392 (549)
                      ||+|+++||+..+|.|.+|||||++||++++..|+|..|+|+.+.|++||||+..+.+|.+||.|.|.++|+.|+|.+.|
T Consensus         2 DV~p~slGIe~~gg~~~~iI~rnt~iP~~~t~~f~T~~d~Q~~v~i~V~qGe~~~~~~N~~lg~~~l~~ip~~p~G~~~I   81 (115)
T d1u00a2           2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHI   81 (115)
T ss_dssp             CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSCE
T ss_pred             CccCcceeEEEcCCEEEEEEcCCCCCCceeeeeEEcCCCCceEEEEEEhhccCcccccceEeeEEEEeCcccCccccccE
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCccEEEEEEecCCCCceeEEEecC
Q psy3431         393 DVTFDLDANGILNVTAKDTSSGKSQNITIKND  424 (549)
Q Consensus       393 ~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~  424 (549)
                      +|+|++|.||+|+|+|.+..||++..++|+..
T Consensus        82 ~Vtf~id~nGiL~V~A~d~~tg~~~~i~i~~~  113 (115)
T d1u00a2          82 RVTFQVDADGLLSVTAMEKSTGVEASIQVKPS  113 (115)
T ss_dssp             EEEEEECTTCCEEEEEEETTTCCEEEEEECCC
T ss_pred             EEEEEccCCceEEEEEEECCCCCEeEEEEeCC
Confidence            99999999999999999999999999999765

>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=1.5e-23  Score=180.70  Aligned_cols=132  Identities=30%  Similarity=0.378  Sum_probs=101.2

Q ss_pred             EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC---ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431           3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT---ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK   79 (549)
Q Consensus         3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~   79 (549)
                      .||||||||||+||+...|.  ++ +      .|+.+++...   ...+|..|..+...+|.+... .|+          
T Consensus         2 ~iGIDlGTtns~va~~~~~~--v~-~------~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~-~k~----------   61 (137)
T d1jcea1           2 DIGIDLGTANTLVFLRGKGI--VV-N------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA-IRP----------   61 (137)
T ss_dssp             EEEEEECSSEEEEEETTTEE--EE-E------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-ECC----------
T ss_pred             eEEEEcChhhEEEEEeCCCE--Ee-e------cCCcceEecCCCeEEEEehHHhhhhhhcccccee-EEe----------
Confidence            69999999999998754432  22 1      2555555432   445777776655544433211 110          


Q ss_pred             HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431          80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG  159 (549)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa  159 (549)
                                              .  ......+.++.++++.+++..++...+..+.++|||||++|++.||+++++||
T Consensus        62 ------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VItVPa~f~~~qR~at~~Aa  115 (137)
T d1jcea1          62 ------------------------M--RDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAG  115 (137)
T ss_dssp             ------------------------E--ETTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred             ------------------------c--cCCccCcHHHHHHHHHHHHHHHHhhcCccccceEEEeecccCHHHHHHHHHHH
Confidence                                    0  11467788999999999999999999999999999999999999999999999


Q ss_pred             HHcCCceeEeecchhHHHHhh
Q psy3431         160 AIAGLNVMRIVNEPTAAALAY  180 (549)
Q Consensus       160 ~~AGl~~~~li~Ep~Aaal~y  180 (549)
                      +.|||++++||+||+|||+..
T Consensus       116 ~~AGl~vv~li~EPtAAAiGa  136 (137)
T d1jcea1         116 LEAGASKVFLIEEPMAAAIGS  136 (137)
T ss_dssp             HHTTCSEEEEEEHHHHHHHHT
T ss_pred             HHcCCCEEEEeCCHHHHHhCC
Confidence            999999999999999999853

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=1.4e-21  Score=178.55  Aligned_cols=111  Identities=71%  Similarity=1.102  Sum_probs=98.0

Q ss_pred             CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc--------------ccccc
Q psy3431         188 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR--------------SASDV  253 (549)
Q Consensus       188 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~--------------~~~e~  253 (549)
                      .+++|||||+||||+|+|++++.++ .++++++.++..+||.+||++|++|+.++|.++++              .+||+
T Consensus         3 ~e~~VlV~D~GggT~Dvsv~~~~~~-~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~   81 (193)
T d1bupa2           3 AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACER   81 (193)
T ss_dssp             SCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEeCCCeEEEEEEEEeCC-EEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence            4688999999999999999999988 99999999999999999999999999999887654              56777


Q ss_pred             CC-------------------------------------------------------CCCChHHH-----------HHHH
Q psy3431         254 GD-------------------------------------------------------HHGDAHFV-----------VQSL  267 (549)
Q Consensus       254 ~K-------------------------------------------------------~~~~i~~V-----------i~~~  267 (549)
                      +|                                                       .+.+|+.|           |++.
T Consensus        82 ~K~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~  161 (193)
T d1bupa2          82 AKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL  161 (193)
T ss_dssp             HHHHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHH
T ss_pred             HhhccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHH
Confidence            77                                                       23344444           9999


Q ss_pred             HHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         268 LQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       268 l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                      |+++|++.++..++||++|||+|||++||.||
T Consensus       162 i~~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         162 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHHHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHHHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            99999888888999999999999999999885

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=99.80  E-value=1.2e-20  Score=172.65  Aligned_cols=110  Identities=52%  Similarity=0.814  Sum_probs=94.1

Q ss_pred             CceEEEEEcCCCceeeeEEEeeC---CcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc--------------ccc
Q psy3431         189 ERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR--------------SAS  251 (549)
Q Consensus       189 ~~~vlv~D~Gggt~dvsv~~~~~---~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~--------------~~~  251 (549)
                      +++|||||+||||+|+|++++..   +..++++++.++..+||++||++|++|+.++|+++++              .+|
T Consensus         2 ~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~~   81 (198)
T d1dkgd2           2 NRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAA   81 (198)
T ss_dssp             EEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHH
T ss_pred             CeEEEEEEcCCCcEEEEEEEEEccCCCcEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHH
Confidence            46899999999999999999973   2268999999999999999999999999999987764              467


Q ss_pred             ccCC-----------------------------------------------------------CCCChHHH---------
Q psy3431         252 DVGD-----------------------------------------------------------HHGDAHFV---------  263 (549)
Q Consensus       252 e~~K-----------------------------------------------------------~~~~i~~V---------  263 (549)
                      |++|                                                           ++.+|+.|         
T Consensus        82 e~~K~~Ls~~~~~~i~~~~~~~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~a~~~~~~Id~v~lvGG~sr~  161 (198)
T d1dkgd2          82 EKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRM  161 (198)
T ss_dssp             HHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGS
T ss_pred             HHHHHHhcCCCeEEEEEeeeecCCCCCceEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHCcEEEEEcCccCC
Confidence            7777                                                           33445554         


Q ss_pred             --HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431         264 --VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS  299 (549)
Q Consensus       264 --i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~  299 (549)
                        |++.|+++|+ .++..++||++|||+|||++||+||
T Consensus       162 p~l~~~i~~~f~-~~~~~~~~p~~aVa~GAa~~aa~lS  198 (198)
T d1dkgd2         162 PMVQKKVAEFFG-KEPRKDVNPDEAVAIGAAVQGGVLT  198 (198)
T ss_dssp             HHHHHHHHHHHS-SCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHHC-CCCCCCCChHHHHHHHHHHHHHhcC
Confidence              9999999994 5788999999999999999999875

>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=3.9e-16  Score=120.09  Aligned_cols=76  Identities=33%  Similarity=0.750  Sum_probs=70.3

Q ss_pred             HhhhHHHHHHHHHHHhhhcc--CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3431         456 ARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAG  531 (549)
Q Consensus       456 a~N~LE~~iy~~r~~l~~~~--~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~  531 (549)
                      ++|+||+|||.+|+.|++..  .++++++++.|.+.|+++++||++|.+++.++|++|+++|++++.||+.|+++..|
T Consensus         2 ~~N~LEsyiy~~r~~l~d~~~~~kl~~~dk~~i~~~l~e~~~WL~~n~~a~~ee~~~k~~eLe~~~~PI~~k~y~~~g   79 (84)
T d1ud0a_           2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAG   79 (84)
T ss_dssp             CHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSC
T ss_pred             chhhHHHHHHHHHHHhcchhhccccCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            58999999999999998654  78999999999999999999999888899999999999999999999999987554

>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: DnaK
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=4.4e-11  Score=94.19  Aligned_cols=95  Identities=27%  Similarity=0.436  Sum_probs=88.4

Q ss_pred             CCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHH
Q psy3431         428 LSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEE  507 (549)
Q Consensus       428 ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~  507 (549)
                      ||++||++|++...++..+|+.+|++.++||.+|+|||.++..|.+....++++++..+...++++..||..+   +.+.
T Consensus         1 LS~~EIerMi~eAe~~a~eD~~~r~~ie~rn~ae~~i~~~e~~l~e~~~~l~~~~k~~i~~~i~~l~~~l~~~---d~~~   77 (97)
T d1dkza1           1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAA   77 (97)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHTSS---CHHH
T ss_pred             CCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHH
Confidence            7899999999999999999999999999999999999999999987667899999999999999999999864   6789


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q psy3431         508 YQDKLQQLQKSCMPLMSK  525 (549)
Q Consensus       508 ~~~kl~~L~~~~~~i~~r  525 (549)
                      ++.++.+|+....++...
T Consensus        78 i~~~~~~L~~~~~~l~e~   95 (97)
T d1dkza1          78 IEAKMQELAQVSQKLMEI   95 (97)
T ss_dssp             HHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999888753

>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: immunoglobulin/albumin-binding domain-like
superfamily: Heat shock protein 70kD (HSP70), C-terminal subdomain
family: Heat shock protein 70kD (HSP70), C-terminal subdomain
domain: Chaperone protein hscA (Hsc66)
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=7.7e-11  Score=95.35  Aligned_cols=100  Identities=15%  Similarity=0.239  Sum_probs=93.9

Q ss_pred             CCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHH
Q psy3431         428 LSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEE  507 (549)
Q Consensus       428 ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~  507 (549)
                      ||++||++|+....++..+|..+|+..++||++|++||.++..|.+....++++++..+...+.++..||.++   +...
T Consensus         1 LS~eEIerMi~eA~~~a~eD~~~R~~ie~~n~ae~~i~~~e~~L~e~~~~L~~~e~~~i~~~i~~l~~~l~~~---d~~~   77 (112)
T d1u00a1           1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGD---DVDA   77 (112)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCCHHHHHHHHHHHHHHHHHHHCC---CHHH
Confidence            7899999999999999999999999999999999999999999987778899999999999999999999865   6899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC
Q psy3431         508 YQDKLQQLQKSCMPLMSKMHGGA  530 (549)
Q Consensus       508 ~~~kl~~L~~~~~~i~~r~~e~~  530 (549)
                      ++..++.|+..+.|+..|.++.+
T Consensus        78 I~~~~~~L~~~~~~~a~~~m~~~  100 (112)
T d1u00a1          78 IEQAIKNVDKQTQDFAARRMDQS  100 (112)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998877653

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=99.16  E-value=6.3e-12  Score=113.72  Aligned_cols=105  Identities=24%  Similarity=0.314  Sum_probs=74.9

Q ss_pred             CCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc--------cccccCC---
Q psy3431         187 KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR--------SASDVGD---  255 (549)
Q Consensus       187 ~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~--------~~~e~~K---  255 (549)
                      +++..+||||+||||||+|+++....      ...+....||.+++..+..++...+.....        ......+   
T Consensus         4 ~~~~gvlV~DiGGGT~Dvsi~~~g~~------~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (196)
T d1jcea2           4 EEPSGNMVVDIGGGTTEVAVISLGSI------VTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSK   77 (196)
T ss_dssp             TSSSCEEEEEECSSCEEEEEEETTEE------EEEEEESCSHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHCBCSCCH
T ss_pred             CCCCceEEEEcCCCcEEEEEEEcCCE------eEEeeecCCCcccccchhhhhhhhhcccccchhHHHHHHHHhhhhhhh
Confidence            46788999999999999999986322      222346789999999999999887754433        0000000   


Q ss_pred             -------------------------------------------------CC-----CC--hHHH-----------HHHHH
Q psy3431         256 -------------------------------------------------HH-----GD--AHFV-----------VQSLL  268 (549)
Q Consensus       256 -------------------------------------------------~~-----~~--i~~V-----------i~~~l  268 (549)
                                                                       ..     .+  ++.|           |++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~IvLvGGsS~ip~v~~~l  157 (196)
T d1jcea2          78 ENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLL  157 (196)
T ss_dssp             HHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHH
T ss_pred             hccccceeeeeeeccCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccceEEeCchhcchhHHHHH
Confidence                                                             00     00  1112           99999


Q ss_pred             HhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431         269 QNFFCGKSLNLSINPDEAVAYGAAVQAAIL  298 (549)
Q Consensus       269 ~~~f~~~~~~~~~~~~eava~Gaa~~a~~l  298 (549)
                      ++.| +.++..+.||++|||+|||+++..+
T Consensus       158 ~~~f-g~~v~~~~~P~~aVA~GAai~~~~~  186 (196)
T d1jcea2         158 QKET-GISVIRSEEPLTAVAKGAGMVLDKV  186 (196)
T ss_dssp             HHHH-SSCEEECSSTTTHHHHHHHHGGGCH
T ss_pred             HHHH-CcCCccCCChHHHHHHHHHHHHHCH
Confidence            9999 5788999999999999999977544

>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=2.1e-09  Score=93.62  Aligned_cols=106  Identities=17%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             CCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc----cccccCC-------
Q psy3431         187 KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR----SASDVGD-------  255 (549)
Q Consensus       187 ~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~----~~~e~~K-------  255 (549)
                      .+.+++||+|+||||||+++++  ++ ...+....++..+||.+|+..+.+++...+.....    ..+...+       
T Consensus         4 ~e~~~ilViDiGggTtDi~v~~--~~-~~~~~~~~~~~~~G~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (163)
T d2zgya2           4 DELDSLLIIDLGGTTLDISQVM--GK-LSGISKIYGDSSLGVSLVTSAVKDALSLARTKGSSYLADDIIIHRKDNNYLKQ   80 (163)
T ss_dssp             CTTCEEEEEEECSSCEEEEEEE--GG-GCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGGGHHHHHHHHHTTTCHHHHHH
T ss_pred             CCCCCEEEEECCCCcEEEEEEc--CC-eEEEEEeeccccccchHHHHHHHHhhHHhhchhhhhhHHHHHHhhcccccccc
Confidence            3567999999999999999986  23 44566667778999999999999887643321111    0000000       


Q ss_pred             -------------------------------CCCChHHH---------HHHHHHhhhCCC--CCCCCCChhhHHHccHHH
Q psy3431         256 -------------------------------HHGDAHFV---------VQSLLQNFFCGK--SLNLSINPDEAVAYGAAV  293 (549)
Q Consensus       256 -------------------------------~~~~i~~V---------i~~~l~~~f~~~--~~~~~~~~~eava~Gaa~  293 (549)
                                                     ...+++.|         +++.|++.|+..  .+....||..|+|+|+.+
T Consensus        81 ~~~~~~~~~~i~~~i~~~~~~i~~~i~~~~~~~~~~~~iil~GGGs~ll~~~lk~~~~~~~~~v~i~~~P~~A~a~G~~~  160 (163)
T d2zgya2          81 RINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL  160 (163)
T ss_dssp             HSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccceEEEECchHHHHHHHHHHHhCCCCCCeEECCCcHhHHHHHHHH
Confidence                                           22233333         889999999533  456788999999999988


Q ss_pred             HH
Q psy3431         294 QA  295 (549)
Q Consensus       294 ~a  295 (549)
                      +|
T Consensus       161 ~g  162 (163)
T d2zgya2         161 IG  162 (163)
T ss_dssp             HH
T ss_pred             hc
Confidence            76

>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.15  E-value=2.9e-07  Score=79.46  Aligned_cols=59  Identities=19%  Similarity=0.104  Sum_probs=44.9

Q ss_pred             CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccc
Q psy3431         188 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCR  248 (549)
Q Consensus       188 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~  248 (549)
                      ++.++||+|+||||+|++++...+. .+ +....+....|+.+++..|.+++..++.....
T Consensus         4 ~~g~~lviDIG~gTtDi~v~~~~~~-~~-~~~~~~~~~~g~~~i~~~i~~~i~~~~~~~~~   62 (161)
T d2fsja1           4 QPGYGVVIDVGSRTTDVLTINLMDM-EP-VVELSFSLQIGVGDAISALSRKIAKETGFVVP   62 (161)
T ss_dssp             CSSEEEEEEECSSCEEEEEEETTTT-EE-CGGGCEEESCCHHHHHHHHHHHHHHHHCCCCC
T ss_pred             CCCcEEEEEcCcCeEEEEEEECCCe-EE-EEEEeccHhHHHHHHHHHHHHHHHHHHHhhhh
Confidence            4678999999999999999986444 33 22233346789999999999999988865443

>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Cell division protein FtsA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.36  E-value=3.9e-05  Score=67.56  Aligned_cols=46  Identities=17%  Similarity=0.185  Sum_probs=35.1

Q ss_pred             CceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431         189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA  240 (549)
Q Consensus       189 ~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~  240 (549)
                      +..++++|+|+|||+++++.  +| .+.....   ..+||.+|++.|...+.
T Consensus         6 ~~Gv~vvDiG~~tt~i~i~~--~G-~l~~~~~---i~~GG~~iT~~Ia~~l~   51 (191)
T d1e4ft2           6 DRGVVVVNLGYNFTGLIAYK--NG-VPIKISY---VPVGMKHVIKDVSAVLD   51 (191)
T ss_dssp             HHCEEEEEECSSCEEEEEEE--TT-EEEEEEE---ESCCHHHHHHHHHHHHT
T ss_pred             hCCEEEEEeCCCcEEEEEEE--CC-eEEEEEE---EeeChHHHHHHHHHHhc
Confidence            45689999999999999976  45 3322221   56999999999998775

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]

Probab=97.31  E-value=0.005  Score=55.79  Aligned_cols=34  Identities=26%  Similarity=0.162  Sum_probs=29.6

Q ss_pred             HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431         264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL  298 (549)
Q Consensus       264 i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l  298 (549)
                      +++.+++.+ +.++..+.+|+++.|+|||++|..-
T Consensus       223 ~~~~l~~~l-~~~i~~~~~~~~agaiGAA~lA~~~  256 (259)
T d1huxa_         223 VRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK  256 (259)
T ss_dssp             HHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-CCCEEcCCCccHHHHHHHHHHHHHH
Confidence            788888888 6778889999999999999999753

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.28  E-value=0.023  Score=46.26  Aligned_cols=64  Identities=11%  Similarity=0.038  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHhCCC--cceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhh
Q psy3431         115 EISSMVLTKMKETAEAYLGHS--VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYG  181 (549)
Q Consensus       115 ~v~~~~L~~l~~~a~~~~~~~--~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~  181 (549)
                      +....++.++..   ..++..  ...+++|-|..-+...|+.+.+.+ +..+++.+.+...|..+++++|
T Consensus        74 d~~e~~~~~~~~---~~l~~~~~~~pvlltE~~~~~~~~r~~~~EilFE~~~vp~~~~~~~~~ls~ys~G  140 (140)
T d2fxua1          74 DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG  140 (140)
T ss_dssp             HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHhhh---hhcccCCCCCcceeeccCCCCHHHHHHHHHHhhccCCCCEEEEEhhHHhHhhcCC
Confidence            445555565543   233332  345899999999999999887765 4568899999999999987664

>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.17  E-value=0.0013  Score=55.85  Aligned_cols=42  Identities=21%  Similarity=0.087  Sum_probs=31.3

Q ss_pred             eEEEEecCCCCHHHHHHHHHHHHHc--------C------CceeEeecchhHHHHh
Q psy3431         138 DAVITVPAYFNDAQRQATKDAGAIA--------G------LNVMRIVNEPTAAALA  179 (549)
Q Consensus       138 ~~vitVPa~f~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~  179 (549)
                      .+|+..|..+...+++++++....-        |      +..+.+++||.+|.++
T Consensus       103 ~lv~GLP~~~~~~~ke~~~~~l~~~~~~~~~~~g~~~~i~I~~v~V~pQg~ga~~~  158 (164)
T d2fsja2         103 VIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALY  158 (164)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHH
T ss_pred             EEEecCCHHHHHHHHHHHHHHhcCCCceEEeeCCeEEEEEEeEEEEecCCHHHHHH
Confidence            4688899998888899998876421        1      2457789999988763

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.81  E-value=0.0094  Score=49.87  Aligned_cols=50  Identities=14%  Similarity=0.029  Sum_probs=41.1

Q ss_pred             CcceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhccc
Q psy3431         135 SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDK  184 (549)
Q Consensus       135 ~~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~  184 (549)
                      ....++||-|...+..+|+.+.+.+ +..+++.+.+...|..++++++...
T Consensus       104 ~~~pvlltEp~~~~~~~Re~~~EilFE~~~vpa~~~~~~~~Lslya~g~~~  154 (158)
T d1k8ka1         104 EDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSR  154 (158)
T ss_dssp             GGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGST
T ss_pred             CCCceeeeecCCCCHHHHHHHHHHHhhhcCCCEEEEEchhhhhheeCCCCC
Confidence            4457899999999999999877655 4568899999999999988876553

>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Cell division protein FtsA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.77  E-value=0.039  Score=47.59  Aligned_cols=33  Identities=3%  Similarity=-0.223  Sum_probs=29.2

Q ss_pred             CHHHHHHHHHHHHHcCCceeEeecchhHHHHhh
Q psy3431         148 NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY  180 (549)
Q Consensus       148 ~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y  180 (549)
                      .....+.+.++.+.+|+++..++.+|.|+|.+.
T Consensus       160 ~~~~i~nl~~~~~~~~l~v~~~~~~~~asa~a~  192 (193)
T d1e4ft1         160 PLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGV  192 (193)
T ss_dssp             EHHHHHHHHHHHHHHSCSCEEEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHcCCcchhEEEhHHhhhhcc
Confidence            466788899999999999999999999999753

>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.11  Score=42.89  Aligned_cols=19  Identities=21%  Similarity=0.036  Sum_probs=16.6

Q ss_pred             CEEEEEcCccceEEEEEEC
Q psy3431           2 PAIGIDLGTTYSCVAVFQQ   20 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~   20 (549)
                      ++||||.|.+++++++..+
T Consensus         1 m~I~iD~Gy~nvK~a~~~~   19 (157)
T d2zgya1           1 MLVFIDDGSTNIKLQWQES   19 (157)
T ss_dssp             CEEEEEECSSEEEEEEECS
T ss_pred             CEEEEecCCCcEEEEEecC
Confidence            4799999999999997654

>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Putative regulator protein YcfX
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.39  E-value=0.71  Score=35.29  Aligned_cols=20  Identities=30%  Similarity=0.453  Sum_probs=16.8

Q ss_pred             CEEEEEcCccceEEEEEECC
Q psy3431           2 PAIGIDLGTTYSCVAVFQQG   21 (549)
Q Consensus         2 ~vvGID~Gtt~s~va~~~~g   21 (549)
                      +.+|||+|.|++.+++....
T Consensus         1 MyiGiDiGgT~i~~~l~d~~   20 (117)
T d2ap1a2           1 MYYGFDIGGTKIALGVFDST   20 (117)
T ss_dssp             EEEEEEECSSEEEEEEEETT
T ss_pred             CEEEEEECcceEEEEEEeCC
Confidence            36999999999999987543

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]

Probab=92.05  E-value=0.78  Score=34.93  Aligned_cols=66  Identities=8%  Similarity=0.050  Sum_probs=41.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHh-C-CCc--ceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHh
Q psy3431         112 APEEISSMVLTKMKETAEAYL-G-HSV--RDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALA  179 (549)
Q Consensus       112 ~~~~v~~~~L~~l~~~a~~~~-~-~~~--~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~  179 (549)
                      .++++...+.+.+.+..+..- . ..+  ..+.+.+|.......+..+....  -.+..+.+.++-.||++.
T Consensus        41 ~~~~~~~~i~~~i~~~~~~ag~~~~~~~~~~~~~g~aG~~~~~~~~~l~~~~--~~~~~v~v~nDa~~A~~g  110 (114)
T d1zc6a1          41 GIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQA--PGFARLSLATDGYTTLLG  110 (114)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEESCCCTTSHHHHHHHTC--CCCSEEEEECHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCChhhhceeEEEEEecCCCcHHHHHHHHHhC--CCCCeEEEECHHHHHHHH
Confidence            456666666666655544321 1 112  23567888888777776665432  234578999999999875

>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Putative Holliday junction resolvase RuvX
domain: Hypothetical protein, YqgF homologue
species: Thermus thermophilus [TaxId: 274]

Probab=91.08  E-value=0.067  Score=40.31  Aligned_cols=21  Identities=29%  Similarity=0.362  Sum_probs=18.8

Q ss_pred             CCEEEEEcCccceEEEEEECC
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQG   21 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g   21 (549)
                      |.++|||||+..+.+|+..+.
T Consensus         1 MriLglD~G~kriGiAisd~~   21 (98)
T d1iv0a_           1 MRVGALDVGEARIGLAVGEEG   21 (98)
T ss_dssp             CCEEEEEESSSEEEEEEECSC
T ss_pred             CcEEEEEcCCCEEEEEEecCC
Confidence            899999999999999987543

>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Aquifex aeolicus [TaxId: 63363]

Probab=89.30  E-value=0.11  Score=43.89  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=27.8

Q ss_pred             CceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       189 ~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      +..++|+|+|||++.+++++  ++......+    -.+|...+.+.+
T Consensus         2 e~~~lviDIGGGStEli~~~--~~~i~~~~S----l~lG~vrl~e~f   42 (180)
T d1t6ca2           2 EGEVCVVDQGGGSTEYVFGK--GYKVREVIS----LPIGIVNLTETF   42 (180)
T ss_dssp             CSEEEEEEEETTEEEEEEEE--TTEEEEEEE----ECCCHHHHHHHH
T ss_pred             CCCEEEEEeCCChHhhEEee--CCceeeEEE----eecceEEeeccc
Confidence            46899999999999999875  341222222    567877665443

>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ATPase domain of dehydratase reactivase alpha subunit
domain: ATPase domain of the glycerol dehydratase reactivase alpha subunit
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.06  E-value=0.3  Score=39.93  Aligned_cols=23  Identities=30%  Similarity=0.573  Sum_probs=19.3

Q ss_pred             ceEEEEEcCCCceeeeEEEeeCC
Q psy3431         190 RNVLIFDLGGGTFDVSILSIDEG  212 (549)
Q Consensus       190 ~~vlv~D~Gggt~dvsv~~~~~~  212 (549)
                      ..+.++|+||||+|++++.-++.
T Consensus         4 ~plaIlDlG~GStDasii~~~g~   26 (202)
T d1nbwa3           4 APLAILDLGAGSTDAAIVNAEGQ   26 (202)
T ss_dssp             SSEEEEEECSSEEEEEEECSSSC
T ss_pred             CceEEEEcCCCccchhhccCCCc
Confidence            45789999999999999986544

>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ATPase domain of dehydratase reactivase alpha subunit
domain: Diol dehydratase-reactivating factor large subunit DdrA
species: Klebsiella oxytoca [TaxId: 571]

Probab=87.59  E-value=0.39  Score=39.14  Aligned_cols=23  Identities=39%  Similarity=0.638  Sum_probs=19.3

Q ss_pred             ceEEEEEcCCCceeeeEEEeeCC
Q psy3431         190 RNVLIFDLGGGTFDVSILSIDEG  212 (549)
Q Consensus       190 ~~vlv~D~Gggt~dvsv~~~~~~  212 (549)
                      ..+.++|+||||+|.|++.-++.
T Consensus         4 ~PlAIlDlGaGStDAsii~~~g~   26 (203)
T d2d0oa3           4 RPLAILDLGAGSTDASIINPKGD   26 (203)
T ss_dssp             SSEEEEEECSSEEEEEEECTTCC
T ss_pred             CceEEEEcCCCcccHHHhCCCCc
Confidence            45789999999999999986543

>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Escherichia coli [TaxId: 562]

Probab=87.13  E-value=0.2  Score=42.09  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=26.8

Q ss_pred             ceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431         190 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL  235 (549)
Q Consensus       190 ~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l  235 (549)
                      .+.||+|+|||++.+++++  ++......+    -.+|...+.+.+
T Consensus         2 gr~Lv~DIGGGStEl~~~~--~~~~~~~~S----l~lG~vrl~e~~   41 (177)
T d1u6za3           2 GRKLVIDIGGGSTELVIGE--NFEPILVES----RRMGCVSFAQLY   41 (177)
T ss_dssp             SCEEEEEECSSCEEEEEEE--TTEEEEEEE----ESCCHHHHHHHH
T ss_pred             CCEEEEEeCCChhheEEEE--CCcEeEEEE----eccceEEeeccc
Confidence            4589999999999999774  441222222    578877665543

>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Putative Holliday junction resolvase RuvX
domain: Hypothetical protein YrrK (RuvX)
species: Bacillus subtilis [TaxId: 1423]

Probab=86.41  E-value=0.15  Score=41.16  Aligned_cols=21  Identities=33%  Similarity=0.463  Sum_probs=18.5

Q ss_pred             CCEEEEEcCccceEEEEEECC
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQG   21 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~g   21 (549)
                      |.++|||||+.++++|+..+.
T Consensus         2 mriLgiD~G~kriGvAisd~~   22 (140)
T d1vhxa_           2 LRILGLDLGTKTLGVALSDEM   22 (140)
T ss_dssp             EEEEEEEECSSEEEEEEECTT
T ss_pred             ceEEEEEeCCCEEEEEEecCC
Confidence            789999999999999987544

>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: N-acetylmannosamine kinase NanK
species: Escherichia coli [TaxId: 562]

Probab=86.02  E-value=0.22  Score=38.64  Aligned_cols=19  Identities=32%  Similarity=0.499  Sum_probs=17.8

Q ss_pred             CCEEEEEcCccceEEEEEE
Q psy3431           1 MPAIGIDLGTTYSCVAVFQ   19 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~   19 (549)
                      |.++|||+|.|++.+++..
T Consensus         1 M~~lgiDiGgT~i~~~l~d   19 (119)
T d2aa4a1           1 MTTLAIDIGGTKLAAALIG   19 (119)
T ss_dssp             CCEEEEEECSSEEEEEEEC
T ss_pred             CeEEEEEeCcCEEEEEEEc
Confidence            8999999999999999874

>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Hypothetical protein SP2142
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.48  E-value=0.25  Score=38.06  Aligned_cols=20  Identities=30%  Similarity=0.267  Sum_probs=18.2

Q ss_pred             CCEEEEEcCccceEEEEEEC
Q psy3431           1 MPAIGIDLGTTYSCVAVFQQ   20 (549)
Q Consensus         1 m~vvGID~Gtt~s~va~~~~   20 (549)
                      |.++|||+|.|++++|+...
T Consensus         1 M~i~~iDiGgT~i~~~l~d~   20 (114)
T d2gupa1           1 MTIATIDIGGTGIKFASLTP   20 (114)
T ss_dssp             CCEEEEEEETTEEEEEEECT
T ss_pred             CeEEEEEeCcccEEEEEEcC
Confidence            89999999999999998853

>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: N-acetylglucosamine kinase, NAGK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.37  E-value=7.5  Score=29.29  Aligned_cols=43  Identities=7%  Similarity=0.005  Sum_probs=33.7

Q ss_pred             CcceEEEEecCCCCHHHHHHHHHHHHHc--CC-ceeEeecchhHHH
Q psy3431         135 SVRDAVITVPAYFNDAQRQATKDAGAIA--GL-NVMRIVNEPTAAA  177 (549)
Q Consensus       135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~A--Gl-~~~~li~Ep~Aaa  177 (549)
                      ++..+++.++..=++..++.+.++.+..  ++ ..+.+.++..||.
T Consensus        67 ~i~~i~~GlAG~~~~~~~~~l~~~l~~~~~~~~~~v~v~nDa~~Al  112 (117)
T d2ch5a2          67 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSI  112 (117)
T ss_dssp             CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHH
T ss_pred             cccEEEEEeeccCcchhHHHHHHHHHHHCCCCCceEEEeccHHHHH
Confidence            5778899999987888899999888765  55 3577788877664