Psyllid ID: psy3461

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
MIPVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPKEW
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHccEEEEEEEEEcccEEEEccccccHHHHHHccccccccccccccccccHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccHHcccccccHHHHHHHHHHcccEEEEEEEEccccEcccccccccHHHHHcccccEEEEEEccccccccHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mipvkknkdagygyhERQWQLLRRgryvefnliydrgtkfglqtpgarYESILMSlpltakweymhtpeetskeGQLIKILKNPKEW
Flexible Loop (DISEMBL)
mipvkknkdagygyherqwqllrrGRYVEFNLIYDrgtkfglqtpgARYESILMSLPLTAKWEYMHTpeetskegqlikilknpkew
Low Complexity Region (SEG)
MIPVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPKEW
Disordered region (IsUnstruct)
**********GYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMH*********************
Disordered Region (DISOPRED)
MIPVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPKEW
Disordered Region (DISEMBL)
********DAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPKEW
Disordered Region (DISPRO)
*I****NKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPK**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIPVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKNPKEW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
Q9V3D2	390	Coproporphyrinogen-III ox	yes	N/A	0.965	0.215	0.773	8e-34
P36551	454	Coproporphyrinogen-III ox	yes	N/A	0.965	0.185	0.654	2e-29
Q3B7D0	443	Coproporphyrinogen-III ox	yes	N/A	0.965	0.189	0.666	2e-29
P36552	443	Coproporphyrinogen-III ox	yes	N/A	0.965	0.189	0.666	6e-29
P35055	385	Coproporphyrinogen-III ox	yes	N/A	0.954	0.215	0.630	1e-24
P11353	328	Coproporphyrinogen-III ox	yes	N/A	0.965	0.256	0.607	2e-24
Q42840	391	Coproporphyrinogen-III ox	N/A	N/A	0.954	0.212	0.595	6e-24
Q7XPL2	399	Coproporphyrinogen-III ox	no	N/A	0.954	0.208	0.595	1e-23
Q9LR75	386	Coproporphyrinogen-III ox	yes	N/A	0.954	0.215	0.607	2e-23
Q42946	397	Coproporphyrinogen-III ox	N/A	N/A	0.954	0.209	0.619	2e-23

>sp|Q9V3D2|HEM6_DROME Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox PE=1 SV=1

 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 65/84 (77%), Positives = 76/84 (90%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K+K+  YG +ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A+WE
Sbjct: 306 VRKHKNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHARWE 365

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P+  S+EG+L+K+LKNPK+W
Sbjct: 366 YMHEPKSQSEEGKLMKVLKNPKDW 389

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 3EC: .EC: 3EC: .EC: 3

>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3

 Score =  127 bits (320), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/84 (65%), Positives = 71/84 (84%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+ D  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 369 VKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 428

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH+P E SKE +++++L++P++W
Sbjct: 429 YMHSPSENSKEAEILEVLRHPRDW 452

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|Q3B7D0|HEM6_RAT Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus GN=Cpox PE=2 SV=1

 Score =  127 bits (318), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/84 (66%), Positives = 71/84 (84%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+ D  Y   ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 358 VKKHCDDSYTPQDKLWQQLRRGRYVEFNLVYDRGTKFGLFTPGSRIESILMSLPLTARWE 417

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH+P E SKE +++++L++PK+W
Sbjct: 418 YMHSPPENSKEAEILEVLRHPKDW 441

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|P36552|HEM6_MOUSE Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus GN=Cpox PE=1 SV=2

 Score =  125 bits (315), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/84 (66%), Positives = 71/84 (84%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+ D  Y   ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 358 VKKHCDDSYTPRDKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 417

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH+P E SKE +++++L++PK+W
Sbjct: 418 YMHSPPENSKEAEILEVLRHPKDW 441

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|P35055|HEM6_SOYBN Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX PE=2 SV=1

 Score =  112 bits (279), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           ++K KD  +  H++ WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 302 IEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 360

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H PEE S+E +L+    NPKEW
Sbjct: 361 YDHKPEEGSEEWKLLDACINPKEW 384

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|P11353|HEM6_YEAST Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HEM13 PE=1 SV=2

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 63/84 (75%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VK+ KD  Y   E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESILMSLP  A W 
Sbjct: 243 VKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL 302

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H P   S+E +L+++   P+EW
Sbjct: 303 YNHHPAPGSREAKLLEVTTKPREW 326

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|Q42840|HEM6_HORVU Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare GN=CPX PE=2 SV=1

 Score =  109 bits (272), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           +++ KD  +   ++ WQ +RRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 308 IERRKDTPFNEEQKAWQQVRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 366

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H PEE S+E +L+    NPKEW
Sbjct: 367 YDHKPEEGSEEWKLLDACINPKEW 390

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|Q7XPL2|HEM6_ORYSJ Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=CPX PE=2 SV=2

 Score =  108 bits (270), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           +++ KD  +    + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+W+
Sbjct: 314 IERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWQ 372

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y HTPEE ++E +L+    NPKEW
Sbjct: 373 YDHTPEEGTEERKLLDACINPKEW 396

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|Q9LR75|HEM6_ARATH Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis thaliana GN=CPX PE=1 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K KD  +    + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPL+A+WE
Sbjct: 303 VEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLSARWE 361

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H PEE ++E +L+    NPKEW
Sbjct: 362 YDHKPEEGTEEWKLLDACINPKEW 385

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

>sp|Q42946|HEM6_TOBAC Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum GN=CPX PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K KD  +    + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 314 VEKRKDTPFTDKHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 372

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H PEE ++E +L+    NPKEW
Sbjct: 373 YDHKPEEGTEEWKLLDACINPKEW 396

Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
307175814	395	Coproporphyrinogen III oxidase [Camponot	0.988	0.217	0.839	5e-36
307201741	354	Coproporphyrinogen III oxidase [Harpegna	0.965	0.237	0.821	5e-36
332021316	400	Coproporphyrinogen-III oxidase [Acromyrm	0.988	0.215	0.804	4e-35
322786608	392	hypothetical protein SINV_09923 [Solenop	0.988	0.219	0.816	4e-35
357627465	414	coproporphirynogen oxidase [Danaus plexi	0.965	0.202	0.797	4e-34
156555646	388	PREDICTED: coproporphyrinogen-III oxidas	0.988	0.221	0.793	9e-34
383851667	385	PREDICTED: coproporphyrinogen-III oxidas	0.965	0.218	0.797	9e-34
350425918	385	PREDICTED: coproporphyrinogen-III oxidas	0.965	0.218	0.785	2e-33
340726180	385	PREDICTED: coproporphyrinogen-III oxidas	0.965	0.218	0.785	3e-33
125984037	388	GA17449 [Drosophila pseudoobscura pseudo	0.965	0.216	0.797	3e-33

>gi|307175814|gb|EFN65629.1| Coproporphyrinogen III oxidase [Camponotus floridanus]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)

Query: 2   IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
           IP VKK+KD GYGYHERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A
Sbjct: 298 IPLVKKHKDDGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLNA 357

Query: 61  KWEYMHTPEETSKEGQLIKILKNPKEW 87
           KWEYMH P+  SKE QL+++LKNPK+W
Sbjct: 358 KWEYMHKPKAGSKESQLLEVLKNPKDW 384

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201741|gb|EFN81420.1| Coproporphyrinogen III oxidase [Harpegnathos saltator]

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+KD GYGY ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL AKWE
Sbjct: 265 VKKHKDDGYGYRERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLNAKWE 324

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH PE  SKE QL+++L+NP++W
Sbjct: 325 YMHEPEAGSKESQLLEVLRNPRDW 348

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021316|gb|EGI61691.1| Coproporphyrinogen-III oxidase [Acromyrmex echinatior]

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 79/87 (90%), Gaps = 1/87 (1%)

Query: 2   IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
           IP VKK+K+ GYGYHERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A
Sbjct: 303 IPLVKKHKNDGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLNA 362

Query: 61  KWEYMHTPEETSKEGQLIKILKNPKEW 87
           KWEYMH P+  S+E QL+++LKNP++W
Sbjct: 363 KWEYMHEPKTDSRESQLLEVLKNPRDW 389

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786608|gb|EFZ13003.1| hypothetical protein SINV_09923 [Solenopsis invicta]

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)

Query: 2   IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
           IP VKK+K+ GYGYHERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A
Sbjct: 295 IPLVKKHKNDGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLNA 354

Query: 61  KWEYMHTPEETSKEGQLIKILKNPKEW 87
           KWEYMH P+  SKE +L+++LKNPK+W
Sbjct: 355 KWEYMHEPKAGSKESKLLEVLKNPKDW 381

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627465|gb|EHJ77145.1| coproporphirynogen oxidase [Danaus plexippus]

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/84 (79%), Positives = 75/84 (89%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K+ DAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL AKWE
Sbjct: 320 VQKHADAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLHTPGARYESILMSLPLNAKWE 379

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P+  S E +L+K+LK P++W
Sbjct: 380 YMHDPKPNSPEEKLMKVLKEPRDW 403

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555646|ref|XP_001603631.1| PREDICTED: coproporphyrinogen-III oxidase-like [Nasonia vitripennis]

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 78/87 (89%), Gaps = 1/87 (1%)

Query: 2   IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
           IP V+K+K+ GYGY ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPLTA
Sbjct: 297 IPLVEKHKNDGYGYAERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLTA 356

Query: 61  KWEYMHTPEETSKEGQLIKILKNPKEW 87
           +WEYMH P+  S+EG+LI +LKNP+ W
Sbjct: 357 RWEYMHEPKPDSREGKLIDVLKNPRNW 383

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851667|ref|XP_003701353.1| PREDICTED: coproporphyrinogen-III oxidase-like [Megachile rotundata]

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 67/84 (79%), Positives = 76/84 (90%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+ +KD  YGYHERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL+AKW+
Sbjct: 300 VEMHKDDPYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLSAKWQ 359

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P++ SKE +L+ ILKNPK+W
Sbjct: 360 YMHEPKQGSKEAKLLDILKNPKDW 383

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425918|ref|XP_003494273.1| PREDICTED: coproporphyrinogen-III oxidase-like [Bombus impatiens]

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/84 (78%), Positives = 74/84 (88%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V K+KD GYGY ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL+A W+
Sbjct: 300 VDKHKDDGYGYSERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLSANWQ 359

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P+  SKE +L+ +L+NPKEW
Sbjct: 360 YMHEPKPGSKEAELVDVLRNPKEW 383

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726180|ref|XP_003401439.1| PREDICTED: coproporphyrinogen-III oxidase-like [Bombus terrestris]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/84 (78%), Positives = 74/84 (88%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V K+KD GYGY ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL+A W+
Sbjct: 300 VDKHKDDGYGYSERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLSANWQ 359

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P+  SKE +L+ +L+NPKEW
Sbjct: 360 YMHEPKPGSKEAELVDVLRNPKEW 383

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125984037|ref|XP_001355783.1| GA17449 [Drosophila pseudoobscura pseudoobscura] gi|54644100|gb|EAL32842.1| GA17449 [Drosophila pseudoobscura pseudoobscura]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/84 (79%), Positives = 77/84 (91%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K+K+  YG +ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A+WE
Sbjct: 304 VQKHKNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHARWE 363

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH P+ TSKEG+L+K+LKNPK+W
Sbjct: 364 YMHEPKSTSKEGELMKVLKNPKDW 387

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
FB|FBgn0021944	390	Coprox "Coproporphyrinogen oxi	0.988	0.220	0.758	2e-33
UNIPROTKB|F1NR99	357	CPOX "Uncharacterized protein"	0.988	0.240	0.666	5.6e-29
RGD|1311817	443	Cpox "coproporphyrinogen oxida	0.988	0.194	0.655	7.1e-29
MGI|MGI:104841	443	Cpox "coproporphyrinogen oxida	0.988	0.194	0.655	9.1e-29
UNIPROTKB|P36551	454	CPOX "Coproporphyrinogen-III o	0.988	0.189	0.655	1.5e-28
UNIPROTKB|F1PW12	280	CPOX "Uncharacterized protein"	0.988	0.307	0.643	3.9e-28
UNIPROTKB|F1SK95	441	CPOX "Uncharacterized protein"	0.988	0.195	0.643	5e-28
UNIPROTKB|E1BKY9	449	CPOX "Uncharacterized protein"	0.988	0.191	0.632	6.4e-28
ZFIN|ZDB-GENE-030131-9884	449	cpox "coproporphyrinogen oxida	0.965	0.187	0.619	2e-26
UNIPROTKB|G4NCJ7	418	MGG_01061 "Coproporphyrinogen	0.988	0.205	0.586	2.2e-25

FB|FBgn0021944 Coprox "Coproporphyrinogen oxidase" [Drosophila melanogaster (taxid:7227)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 66/87 (75%), Positives = 78/87 (89%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P V+K+K+  YG +ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A
Sbjct:   303 VPLVRKHKNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHA 362

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH P+  S+EG+L+K+LKNPK+W
Sbjct:   363 RWEYMHEPKSQSEEGKLMKVLKNPKDW 389

GO:0004109 "coproporphyrinogen oxidase activity" evidence=ISS;NAS

GO:0006783 "heme biosynthetic process" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1NR99 CPOX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 58/87 (66%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P VKK+    Y   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   269 VPIVKKHCHDSYTPEEKLWQQLRRGRYVEFNLVYDRGTKFGLLTPGSRIESILMSLPLTA 328

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYM+TP E+SKE +++++L+NPK+W
Sbjct:   329 RWEYMNTPSESSKEAEILEVLRNPKDW 355

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

RGD|1311817 Cpox "coproporphyrinogen oxidase" [Rattus norvegicus (taxid:10116)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 57/87 (65%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P VKK+ D  Y   ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   355 VPIVKKHCDDSYTPQDKLWQQLRRGRYVEFNLVYDRGTKFGLFTPGSRIESILMSLPLTA 414

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++PK+W
Sbjct:   415 RWEYMHSPPENSKEAEILEVLRHPKDW 441

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0005758 "mitochondrial intermembrane space" evidence=IDA

GO:0006782 "protoporphyrinogen IX biosynthetic process" evidence=IEA;IDA

GO:0006783 "heme biosynthetic process" evidence=IDA

GO:0010035 "response to inorganic substance" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

GO:0010288 "response to lead ion" evidence=IEP

GO:0017085 "response to insecticide" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=ISO;ISS

GO:0046685 "response to arsenic-containing substance" evidence=IEP

GO:0051597 "response to methylmercury" evidence=IEP

MGI|MGI:104841 Cpox "coproporphyrinogen oxidase" [Mus musculus (taxid:10090)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 57/87 (65%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P VKK+ D  Y   ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   355 VPIVKKHCDDSYTPRDKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTA 414

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++PK+W
Sbjct:   415 RWEYMHSPPENSKEAEILEVLRHPKDW 441

GO:0004109 "coproporphyrinogen oxidase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005758 "mitochondrial intermembrane space" evidence=ISO

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

GO:0006782 "protoporphyrinogen IX biosynthetic process" evidence=ISO

GO:0006783 "heme biosynthetic process" evidence=ISO;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|P36551 CPOX "Coproporphyrinogen-III oxidase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/87 (65%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             IP VKK+ D  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   366 IPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTA 425

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++P++W
Sbjct:   426 RWEYMHSPSENSKEAEILEVLRHPRDW 452

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0010039 "response to iron ion" evidence=IEA

GO:0010288 "response to lead ion" evidence=IEA

GO:0017085 "response to insecticide" evidence=IEA

GO:0046685 "response to arsenic-containing substance" evidence=IEA

GO:0051597 "response to methylmercury" evidence=IEA

GO:0006782 "protoporphyrinogen IX biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0004109 "coproporphyrinogen oxidase activity" evidence=TAS

GO:0005758 "mitochondrial intermembrane space" evidence=TAS

GO:0006778 "porphyrin-containing compound metabolic process" evidence=TAS

GO:0006783 "heme biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|F1PW12 CPOX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 56/87 (64%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             IP VKK+ +  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   192 IPLVKKHHNDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTA 251

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++P++W
Sbjct:   252 RWEYMHSPPENSKEAEILEVLRHPRDW 278

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IEA

UNIPROTKB|F1SK95 CPOX "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 56/87 (64%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             IP VKK+ +  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   353 IPLVKKHCNDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTA 412

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++P++W
Sbjct:   413 RWEYMHSPSENSKEAEILEVLRHPRDW 439

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IEA

UNIPROTKB|E1BKY9 CPOX "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 55/87 (63%), Positives = 73/87 (83%)

Query:     2 IP-VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P VKK+ +  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA
Sbjct:   361 VPLVKKHCNDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTA 420

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
             +WEYMH+P E SKE +++++L++P++W
Sbjct:   421 RWEYMHSPSENSKEAEMLEVLRHPRDW 447

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006783 "heme biosynthetic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-9884 cpox "coproporphyrinogen oxidase" [Danio rerio (taxid:7955)]

 Score = 299 (110.3 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 52/84 (61%), Positives = 68/84 (80%)

Query:     4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
             V K+ +  +   E+ WQ +RRGRYVEFNL+YDRG KFGL TPG+R ESILMSLPLTA+WE
Sbjct:   365 VYKHLNDSFTPEEKDWQQVRRGRYVEFNLVYDRGVKFGLATPGSRIESILMSLPLTARWE 424

Query:    64 YMHTPEETSKEGQLIKILKNPKEW 87
             YMH P + +KE ++++IL+NPK+W
Sbjct:   425 YMHEPTKGTKEAEMLEILRNPKQW 448

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004109 "coproporphyrinogen oxidase activity" evidence=IEA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

GO:0042541 "hemoglobin biosynthetic process" evidence=IMP

UNIPROTKB|G4NCJ7 MGG_01061 "Coproporphyrinogen III oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 51/87 (58%), Positives = 67/87 (77%)

Query:     2 IPV-KKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTA 60
             +P+  + KD  +   E++WQ LRRG+YVEFNL++DRGT FGL +PGAR ESILMSLP TA
Sbjct:   331 VPIINRRKDMPFTPEEKEWQQLRRGKYVEFNLVHDRGTAFGLNSPGARVESILMSLPRTA 390

Query:    61 KWEYMHTPEETSKEGQLIKILKNPKEW 87
              W+YMH P   S+E +L +IL++PKEW
Sbjct:   391 SWQYMHEPAPKSREARLTEILRSPKEW 417

GO:0005575 "cellular_component" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5N3S5	HEM6_SYNP6	1, ., 3, ., 3, ., 3	0.5952	0.9540	0.2426	yes	N/A
A2C524	HEM6_PROM1	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2385	yes	N/A
A9QZK6	HEM6_YERPG	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
A7N128	HEM6_VIBHB	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2721	yes	N/A
Q1CJZ7	HEM6_YERPN	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
B8E3K7	HEM6_SHEB2	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2748	yes	N/A
Q8EKQ2	HEM6_SHEON	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A
B0TLD7	HEM6_SHEHH	1, ., 3, ., 3, ., 3	0.6071	0.9540	0.2730	yes	N/A
Q0HPA0	HEM6_SHESM	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A
Q668I6	HEM6_YERPS	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
A1S1K6	HEM6_SHEAM	1, ., 3, ., 3, ., 3	0.5476	0.9540	0.2730	yes	N/A
A6WHB7	HEM6_SHEB8	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2748	yes	N/A
B4SNL7	HEM6_STRM5	1, ., 3, ., 3, ., 3	0.5833	0.9425	0.2751	yes	N/A
Q87KE3	HEM6_VIBPA	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2721	yes	N/A
P36551	HEM6_HUMAN	1, ., 3, ., 3, ., 3	0.6547	0.9655	0.1850	yes	N/A
B2K962	HEM6_YERPB	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
P36552	HEM6_MOUSE	1, ., 3, ., 3, ., 3	0.6666	0.9655	0.1896	yes	N/A
Q46IN4	HEM6_PROMT	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2385	yes	N/A
Q6LLK0	HEM6_PHOPR	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2757	yes	N/A
Q9V3D2	HEM6_DROME	1, ., 3, ., 3, ., 3	0.7738	0.9655	0.2153	yes	N/A
B2SK75	HEM6_XANOP	1, ., 3, ., 3, ., 3	0.5952	0.9425	0.2742	yes	N/A
A1RDY8	HEM6_SHESW	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A
B8CHB9	HEM6_SHEPW	1, ., 3, ., 3, ., 3	0.5833	0.9540	0.2730	yes	N/A
A8FP82	HEM6_SHESH	1, ., 3, ., 3, ., 3	0.5952	0.9540	0.2712	yes	N/A
Q5GUY0	HEM6_XANOR	1, ., 3, ., 3, ., 3	0.5952	0.9425	0.2742	yes	N/A
A4TMK2	HEM6_YERPP	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
Q2NY70	HEM6_XANOM	1, ., 3, ., 3, ., 3	0.5952	0.9425	0.2742	yes	N/A
A4Y1D3	HEM6_SHEPC	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A
P35055	HEM6_SOYBN	1, ., 3, ., 3, ., 3	0.6309	0.9540	0.2155	yes	N/A
Q8ZCF9	HEM6_YERPE	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
Q12T99	HEM6_SHEDO	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2721	yes	N/A
A8GYI0	HEM6_SHEPA	1, ., 3, ., 3, ., 3	0.5952	0.9540	0.2730	yes	N/A
Q3B7D0	HEM6_RAT	1, ., 3, ., 3, ., 3	0.6666	0.9655	0.1896	yes	N/A
B1JSJ6	HEM6_YERPY	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2686	yes	N/A
Q9LR75	HEM6_ARATH	1, ., 3, ., 3, ., 3	0.6071	0.9540	0.2150	yes	N/A
Q8DL15	HEM6_THEEB	1, ., 3, ., 3, ., 3	0.5833	0.9540	0.2455	yes	N/A
Q6D8U8	HEM6_ERWCT	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2677	yes	N/A
Q8YX58	HEM62_NOSS1	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2391	yes	N/A
Q8PF76	HEM6_XANAC	1, ., 3, ., 3, ., 3	0.5952	0.9425	0.2742	yes	N/A
Q3BMT4	HEM6_XANC5	1, ., 3, ., 3, ., 3	0.5952	0.9425	0.2742	yes	N/A
A3CYL1	HEM6_SHEB5	1, ., 3, ., 3, ., 3	0.5714	0.9540	0.2748	yes	N/A
Q0I0R6	HEM6_SHESR	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A
B2FND0	HEM6_STRMK	1, ., 3, ., 3, ., 3	0.6071	0.9425	0.2751	yes	N/A
P11353	HEM6_YEAST	1, ., 3, ., 3, ., 3	0.6071	0.9655	0.2560	yes	N/A
B1KCX1	HEM6_SHEWM	1, ., 3, ., 3, ., 3	0.6071	0.9540	0.2712	yes	N/A
A0KR67	HEM6_SHESA	1, ., 3, ., 3, ., 3	0.5595	0.9540	0.2748	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.3	LOW CONFIDENCE prediction!
3rd Layer	1.3.3.3	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	87
pfam01218	296	pfam01218, Coprogen_oxidas, Coproporphyrinogen III	4e-50
PLN02873	274	PLN02873, PLN02873, coproporphyrinogen-III oxidase	4e-43
PRK05330	300	PRK05330, PRK05330, coproporphyrinogen III oxidase	3e-41
COG0408	303	COG0408, HemF, Coproporphyrinogen III oxidase [Coe	5e-36

>gnl|CDD|216370 pfam01218, Coprogen_oxidas, Coproporphyrinogen III oxidase

 Score =  158 bits (403), Expect = 4e-50
 Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V++ KD  YG  ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP  A+WE
Sbjct: 213 VERRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGG-RTESILMSLPPLARWE 271

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  S E +L ++   P++W
Sbjct: 272 YDWQPEPGSPEARLYEVFLKPRDW 295

Length = 296

>gnl|CDD|215471 PLN02873, PLN02873, coproporphyrinogen-III oxidase

 Score =  140 bits (354), Expect = 4e-43
 Identities = 52/84 (61%), Positives = 65/84 (77%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V+K KD  +   ++ WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLP TA+WE
Sbjct: 191 VEKRKDDPFTEEQKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPPTARWE 249

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H PEE S+E +L+  L+NP+EW
Sbjct: 250 YDHQPEEGSEEAELLDALRNPREW 273

Length = 274

>gnl|CDD|235413 PRK05330, PRK05330, coproporphyrinogen III oxidase; Provisional

 Score =  136 bits (344), Expect = 3e-41
 Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 2/84 (2%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V++ KD  YG  ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP   +WE
Sbjct: 218 VERRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSLPPLVRWE 276

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y + PE  S E +L   LK P++W
Sbjct: 277 YDYQPEPGSPEARLSDFLK-PRDW 299

Length = 300

>gnl|CDD|223485 COG0408, HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]

 Score =  122 bits (309), Expect = 5e-36
 Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 2/84 (2%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V++ K+  +   ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP   +WE
Sbjct: 221 VERRKNMPWTEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGG-RVESILMSLPPLVRWE 279

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y + PE  S E  L   LK P++W
Sbjct: 280 YDYQPEPGSPEAALSVFLK-PRDW 302

Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	87
PLN02873	274	coproporphyrinogen-III oxidase	100.0
PRK05330	300	coproporphyrinogen III oxidase; Provisional	100.0
PF01218	296	Coprogen_oxidas: Coproporphyrinogen III oxidase; I	100.0
COG0408	303	HemF Coproporphyrinogen III oxidase [Coenzyme meta	100.0
KOG1518|consensus	382		100.0

>PLN02873 coproporphyrinogen-III oxidase

Probab=100.00  E-value=4e-51  Score=318.06  Aligned_cols=84  Identities=62%  Similarity=1.103  Sum_probs=82.7

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      ||+||++++||++||+||++||||||||||||||||+|||+|+| |||||||||||+|+|+|+++|++||+|++|+++|+
T Consensus       190 Iv~rr~~~~~te~er~~Ql~RRGRYvEFNLvyDRGT~FGL~t~g-r~EsILmSLPp~a~W~Y~~~p~~gs~E~~l~~~l~  268 (274)
T PLN02873        190 IVEKRKDDPFTEEQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGG-RIESILVSLPPTARWEYDHQPEEGSEEAELLDALR  268 (274)
T ss_pred             HHHHhCCCCCCHHHHHHHHHhCcceEEEEeeeecCchhhccCCC-CceEEEEcCCCCCcccCCCCCCCCCHHHHHHHHhh
Confidence            59999999999999999999999999999999999999999976 99999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       269 ~prdW  273 (274)
T PLN02873        269 NPREW  273 (274)
T ss_pred             CCCCC
Confidence            99999

>PRK05330 coproporphyrinogen III oxidase; Provisional

Probab=100.00  E-value=9.8e-50  Score=313.08  Aligned_cols=83  Identities=58%  Similarity=0.976  Sum_probs=81.2

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      +|+||++.+||++||+||++||||||||||||||||+|||+|+ ||||||||||||+|+|+|+++|++||+|++| ++|+
T Consensus       217 Iv~rr~~~~~te~er~~Ql~rRGRYvEFNLvyDRGT~FGL~t~-gr~EsILmSLPp~a~W~Y~~~p~~gs~E~~l-~~~~  294 (300)
T PRK05330        217 IVERRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQTG-GRTESILMSLPPLVRWEYDYQPEPGSPEARL-SDFL  294 (300)
T ss_pred             HHHHhCCCCCCHHHHHHHHhhccceEEEEeeeecCcHhhccCC-CcceeEEEcCCCCCcccCCCCCCCCCHHHHH-HHhc
Confidence            5999999999999999999999999999999999999999996 5999999999999999999999999999999 9999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       295 ~prdW  299 (300)
T PRK05330        295 KPRDW  299 (300)
T ss_pred             CCCCC
Confidence            99999

>PF01218 Coprogen_oxidas: Coproporphyrinogen III oxidase; InterPro: IPR001260 Coprogen oxidase (i

Probab=100.00  E-value=1.3e-50  Score=317.49  Aligned_cols=84  Identities=62%  Similarity=1.073  Sum_probs=67.2

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      ||+||++++||++||+||++||||||||||||||||+|||+|+ ||||||||||||+|+|+|+++|++||+|++|+++|+
T Consensus       212 Iv~rr~~~~~t~~er~~Ql~RRGRYvEFNLvyDRGT~FGL~t~-gr~EsILmSLPp~a~W~Y~~~p~~gs~E~~l~~~~~  290 (296)
T PF01218_consen  212 IVERRKDEPYTEEEREWQLYRRGRYVEFNLVYDRGTKFGLQTG-GRIESILMSLPPTARWEYDYQPEPGSPEAELLEVLL  290 (296)
T ss_dssp             HHHHHTTS---HHHHHHHHHHHHHHHHHHHHT-HHHHHHHHTT---HHHHGGGS-SEEE--TT----TTSHHHHHHHTHH
T ss_pred             HHHHhCCCCCCHHHHHHHHHhccceEEEEEEeccCceecccCC-CchhhhhhcCchhcCccCCCCCCCcCHHHHHHHHhc
Confidence            5999999999999999999999999999999999999999998 699999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       291 ~prdW  295 (296)
T PF01218_consen  291 KPRDW  295 (296)
T ss_dssp             HH---
T ss_pred             ccCCC
Confidence            99999

e. coproporphyrin III oxidase or coproporphyrinogenase) catalyses the oxidative decarboxylation of coproporphyrinogen III to proto-porhyrinogen IX in the haem and chlorophyll biosynthetic pathways [, ]. The protein is a homodimer containing two internally bound iron atoms per molecule of native protein []. The enzyme is active in the presence of molecular oxygen that acts as an electron acceptor. The enzyme is widely distributed having been found in a variety of eukaryotic and prokaryotic sources.; GO: 0004109 coproporphyrinogen oxidase activity, 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 3EJO_B 3DWR_B 1VJU_B 2QT8_B 3DWS_A 2AEX_A 1TKL_B 1TK1_A 1TLB_Q 1TXN_A ....

>COG0408 HemF Coproporphyrinogen III oxidase [Coenzyme metabolism]

Probab=100.00  E-value=1e-48  Score=307.41  Aligned_cols=84  Identities=55%  Similarity=0.934  Sum_probs=81.8

Q ss_pred             ccccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHh
Q psy3461           2 IPVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKIL   81 (87)
Q Consensus         2 ~~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l   81 (87)
                      .||+||++++||++||+||+|||||||||||||||||+|||+|+| |+|||||||||+|+|+|+|+|++||+||+|+ ++
T Consensus       219 pIV~~r~~~~~te~er~fQl~RRGRYVEFNLvyDRGT~FGLqTgG-r~ESILmSlPP~vrW~Y~~~P~~gs~ea~L~-~f  296 (303)
T COG0408         219 PIVERRKNMPWTEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGG-RVESILMSLPPLVRWEYDYQPEPGSPEAALS-VF  296 (303)
T ss_pred             HHHHHhcCCCCchhHHHHHHHhccceEEEEEEEeccceEeeccCC-chhhhhhcCCccccccCCCCCCCCCchhhhh-hh
Confidence            469999999999999999999999999999999999999999986 9999999999999999999999999999999 78


Q ss_pred             cCCCCC
Q psy3461          82 KNPKEW   87 (87)
Q Consensus        82 ~~PrdW   87 (87)
                      +.||||
T Consensus       297 l~prdW  302 (303)
T COG0408         297 LKPRDW  302 (303)
T ss_pred             cCcccc
Confidence            899999

>KOG1518|consensus

Probab=100.00  E-value=4.1e-46  Score=297.65  Aligned_cols=84  Identities=65%  Similarity=1.200  Sum_probs=83.7

Q ss_pred             ccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhcC
Q psy3461           4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILKN   83 (87)
Q Consensus         4 v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~~   83 (87)
                      |+||++++||++||+||++||||||||||+|||||+|||+|+|.||||||||||.+|+|+|+|+|.++|+|++||+|+++
T Consensus       298 v~krkdmeft~~ek~wQ~lRRGrYvEFNliYDRGT~FGL~tpgsRiESILmsLPlha~w~y~h~P~~~sre~~ll~V~~~  377 (382)
T KOG1518|consen  298 VEKRKDMEFTEQEKQWQQLRRGRYVEFNLIYDRGTKFGLKTPGSRIESILMSLPLHASWEYMHEPKQGSREAKLLEVTHT  377 (382)
T ss_pred             hhhhcCCCcChhHHHHHHHhccceEEEEEEEecCceeeccCCcchhHhHhhcccchhhhhhhcCCCCcchhhHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q psy3461          84 PKEW   87 (87)
Q Consensus        84 PrdW   87 (87)
                      ||||
T Consensus       378 P~eW  381 (382)
T KOG1518|consen  378 PREW  381 (382)
T ss_pred             Cccc
Confidence            9999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	87
2aex_A	346	The 1.58a Crystal Structure Of Human Coproporphyrin		2e-30
1tkl_A	326	Yeast Oxygen-Dependent Coproporphyrinogen Oxidase L		2e-25
1txn_A	328	Crystal Structure Of Coproporphyrinogen Iii Oxidase		9e-25
3dwr_A	309	Leishmania Major Coproporphyrinogen Iii Oxidase Wit		7e-16
1vju_A	309	Coproporphyrinogen Iii Oxidase From Leishmania Majo		7e-16
3e8j_A	306	Coproporphyrinogen Iii Oxidase From Leishmania Naif		7e-16
3ejo_A	310	Coproporphyrinogen Iii Oxidase From Leishmania Dono		2e-15

>pdb|2AEX|A Chain A, The 1.58a Crystal Structure Of Human Coproporphyrinogen Oxidase Reveals The Structural Basis Of Hereditary Coproporphyria Length = 346

Iteration: 1
 Score =  127 bits (319), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/84 (65%), Positives = 71/84 (84%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+ D  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 261 VKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 320
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH+P E SKE +++++L++P++W
Sbjct: 321 YMHSPSENSKEAEILEVLRHPRDW 344

>pdb|1TKL|A Chain A, Yeast Oxygen-Dependent Coproporphyrinogen Oxidase Length = 326

Iteration: 1
 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 63/84 (75%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VK+ KD  Y   E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESILMSLP  A W 
Sbjct: 241 VKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL 300
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H P   S+E +L+++   P+EW
Sbjct: 301 YNHHPAPGSREAKLLEVTTKPREW 324

>pdb|1TXN|A Chain A, Crystal Structure Of Coproporphyrinogen Iii Oxidase Length = 328

Iteration: 1
 Score =  108 bits (269), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VK+ KD  Y   E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESIL SLP  A W 
Sbjct: 243 VKRRKDXPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILXSLPEHASWL 302
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H P   S+E +L+++   P+EW
Sbjct: 303 YNHHPAPGSREAKLLEVTTKPREW 326

>pdb|3DWR|A Chain A, Leishmania Major Coproporphyrinogen Iii Oxidase With Bound Ligand Length = 309

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESIL+SLP  A+W 
Sbjct: 226 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILISLPPRARWG 284
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     ++W
Sbjct: 285 YNWQPEPGTPEARLTEYFLTKRQW 308

>pdb|1VJU|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Major Length = 309

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESIL+SLP  A+W 
Sbjct: 226 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILISLPPRARWG 284
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     ++W
Sbjct: 285 YNWQPEPGTPEARLTEYFLTKRQW 308

>pdb|3E8J|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Naiffi Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESILMSLP  A+W 
Sbjct: 223 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILMSLPPRARWG 281
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     K+W
Sbjct: 282 YNWHPEPGTPEARLTEYFLTKKQW 305

>pdb|3EJO|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Donovani Length = 310

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESIL+SLP  A+W 
Sbjct: 227 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILISLPPRARWG 285
Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     ++W
Sbjct: 286 YDWQPEPGTPEARLTEYFLMKRQW 309

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	87
2aex_A	346	Coproporphyrinogen III oxidase, mitochondrial; FLA	5e-56
1txn_A	328	Coproporphyrinogen III oxidase; structural genomic	2e-54
1vju_A	309	Coproporphyrinogen III oxidase; structural genomic	2e-52

>2aex_A Coproporphyrinogen III oxidase, mitochondrial; FLAT beta-sheet sandwiched by helices, oxidoreductase; HET: CIT; 1.58A {Homo sapiens} Length = 346

 Score =  174 bits (444), Expect = 5e-56
 Identities = 55/84 (65%), Positives = 71/84 (84%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VKK+ D  +   E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 261 VKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 320

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           YMH+P E SKE +++++L++P++W
Sbjct: 321 YMHSPSENSKEAEILEVLRHPRDW 344

>1txn_A Coproporphyrinogen III oxidase; structural genomics, dimer, novel fold, PSI, protein structu initiative; 1.70A {Saccharomyces cerevisiae} SCOP: d.248.1.1 PDB: 1tkl_A 1tlb_A 1tk1_A Length = 328

 Score =  170 bits (432), Expect = 2e-54
 Identities = 51/84 (60%), Positives = 63/84 (75%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VK+ KD  Y   E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESILMSLP  A W 
Sbjct: 243 VKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL 302

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H P   S+E +L+++   P+EW
Sbjct: 303 YNHHPAPGSREAKLLEVTTKPREW 326

>1vju_A Coproporphyrinogen III oxidase; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.40A {Leishmania major} SCOP: d.248.1.1 PDB: 2qt8_A* 3dwr_A 3dws_A* 3ejo_A 3e8j_A* Length = 309

 Score =  164 bits (417), Expect = 2e-52
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESIL+SLP  A+W 
Sbjct: 226 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILISLPPRARWG 284

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     ++W
Sbjct: 285 YNWQPEPGTPEARLTEYFLTKRQW 308

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
1txn_A	328	Coproporphyrinogen III oxidase; structural genomic	100.0
2aex_A	346	Coproporphyrinogen III oxidase, mitochondrial; FLA	100.0
1vju_A	309	Coproporphyrinogen III oxidase; structural genomic	100.0

>1txn_A Coproporphyrinogen III oxidase; structural genomics, dimer, novel fold, PSI, protein structu initiative; 1.70A {Saccharomyces cerevisiae} SCOP: d.248.1.1 PDB: 1tkl_A 1tlb_A 1tk1_A

Probab=100.00  E-value=1.4e-52  Score=331.22  Aligned_cols=85  Identities=60%  Similarity=1.080  Sum_probs=28.4

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      ||+||++++||++||+||++||||||||||||||||+|||+|+|||||||||||||+|+|+|+|+|++||+|++|+++|+
T Consensus       242 Iv~rr~~~~~te~er~~Ql~RRGRYVEFNLvyDRGT~FGL~tpggr~ESILmSLPp~a~W~Y~~~pe~gS~Ea~l~~~~~  321 (328)
T 1txn_A          242 IVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWLYNHHPAPGSREAKLLEVTT  321 (328)
T ss_dssp             HHHTTTTSCCCHHHHHHHHHHHTHHHHHC---------------------------------------------------
T ss_pred             HHHHhCCCCCCHHHHHHHHhcccceEEEEeeeecCchhhCCCCCCCceeeeecCCCCCccccCCCCCCcCHHHHHHHHhc
Confidence            59999999999999999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       322 ~prdW  326 (328)
T 1txn_A          322 KPREW  326 (328)
T ss_dssp             -----
T ss_pred             CcccC
Confidence            99999

>2aex_A Coproporphyrinogen III oxidase, mitochondrial; FLAT beta-sheet sandwiched by helices, oxidoreductase; HET: CIT; 1.58A {Homo sapiens}

Probab=100.00  E-value=6.3e-52  Score=329.36  Aligned_cols=85  Identities=65%  Similarity=1.195  Sum_probs=83.7

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      ||+||++++||++||+||++||||||||||||||||+|||+|+|||||||||||||+|+|+|+++|++||+|++|+++|+
T Consensus       260 Iv~rr~~~~~te~er~~Ql~RRGRYVEFNLvyDRGT~FGL~Tpggr~ESILmSLPp~a~W~Y~~~pe~gS~Ea~l~~~~~  339 (346)
T 2aex_A          260 LVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEILEVLR  339 (346)
T ss_dssp             HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHCCCCTTGGGSSSCCHHHHHHHCCSCCCCCCCCCCCTTSHHHHHHHHHH
T ss_pred             HHHHhCCCCCCHHHHHHHHhhCCeeeEEEEEeecCccccccCCCCChhhhhhcCCCcCccccCCCCCCCCHHHHHHHHhc
Confidence            59999999999999999999999999999999999999999977899999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       340 ~prdW  344 (346)
T 2aex_A          340 HPRDW  344 (346)
T ss_dssp             SCCCC
T ss_pred             Ccccc
Confidence            99999

>1vju_A Coproporphyrinogen III oxidase; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.40A {Leishmania major} SCOP: d.248.1.1 PDB: 2qt8_A* 3dwr_A 3dws_A* 3ejo_A 3e8j_A*

Probab=100.00  E-value=1.3e-51  Score=323.97  Aligned_cols=84  Identities=45%  Similarity=0.813  Sum_probs=82.3

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      ||+||++++||++||+||++||||||||||||||||+|||+|+ ||||||||||||+|+|+|+++|++||+|++|+++|+
T Consensus       225 Iv~rr~~~~~te~er~~Ql~RRGRYVEFNLvyDRGT~FGL~tg-gr~ESILmSLPp~a~W~Y~~~pe~gS~Ea~L~~~~~  303 (309)
T 1vju_A          225 IVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSG-GRTESILISLPPRARWGYNWQPEPGTPEARLTEYFL  303 (309)
T ss_dssp             HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTT-CCHHHHGGGSCSCCCCCTTCCCCTTSHHHHHHHTHH
T ss_pred             HHHHhCCCCCCHHHHHHHHhhccceEEEEeeeecCchhhccCC-CcceeeeecCCccCeeccCCCCCCCCHHHHHHHHhc
Confidence            5999999999999999999999999999999999999999995 699999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       304 ~prdW  308 (309)
T 1vju_A          304 TKRQW  308 (309)
T ss_dssp             HHCCC
T ss_pred             CCcCC
Confidence            99999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	87
d1vjua_	302	d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Le	1e-37
d1tkla_	325	d.248.1.1 (A:) Coproporphyrinogen III oxidase {Bak	9e-37

>d1vjua_ d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Leishmania major [TaxId: 5664]} Length = 302

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Hypothetical protein Lmaj006828
species: Leishmania major [TaxId: 5664]

 Score =  125 bits (315), Expect = 1e-37
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           V + K+  Y   + ++Q  RRGRY EFNL+ DRGTKFGLQ+ G R ESIL+SLP  A+W 
Sbjct: 219 VNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQS-GGRTESILISLPPRARWG 277

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y   PE  + E +L +     ++W
Sbjct: 278 YNWQPEPGTPEARLTEYFLTKRQW 301

>d1tkla_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Coproporphyrinogen III oxidase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  123 bits (310), Expect = 9e-37
 Identities = 51/84 (60%), Positives = 63/84 (75%)

Query: 4   VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
           VK+ KD  Y   E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESILMSLP  A W 
Sbjct: 240 VKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL 299

Query: 64  YMHTPEETSKEGQLIKILKNPKEW 87
           Y H P   S+E +L+++   P+EW
Sbjct: 300 YNHHPAPGSREAKLLEVTTKPREW 323

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1tkla_	325	Coproporphyrinogen III oxidase {Baker's yeast (Sac	100.0
d1vjua_	302	Hypothetical protein Lmaj006828 {Leishmania major	100.0

>d1tkla_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Coproporphyrinogen III oxidase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7e-50  Score=312.78  Aligned_cols=85  Identities=60%  Similarity=1.080  Sum_probs=83.9

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      +|+||++++||++||+||++||||||||||||||||+|||+|+|+|||||||||||+|+|+|+++|++||+|++|+++|+
T Consensus       239 Iv~kr~~~~~t~~~r~~Ql~rRGRYvEFNLlyDRGT~FGL~t~G~r~esILmSlPp~a~W~y~~~~~~~s~e~~l~~~l~  318 (325)
T d1tkla_         239 IVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWLYNHHPAPGSREAKLLEVTT  318 (325)
T ss_dssp             HHHTTTTSCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHSTTCCHHHHGGGSCSEEECCTTCCCCTTSHHHHHHHHHH
T ss_pred             HHHHhccccccHHHHHHHHHhCCceEEEEEEeecCceeeeecCCCCceeEEecCCCCCeeeccCCCCCCCHHHHHHHHHh
Confidence            59999999999999999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       319 ~p~~W  323 (325)
T d1tkla_         319 KPREW  323 (325)
T ss_dssp             SCCCC
T ss_pred             Ccccc
Confidence            99999

>d1vjua_ d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Hypothetical protein Lmaj006828
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.4e-50  Score=309.38  Aligned_cols=84  Identities=45%  Similarity=0.813  Sum_probs=82.3

Q ss_pred             cccccCCCCCCHHHHHHHHHhhcceeEeEEeeeccceecccCCCCceeeeeccCCCcccccccCCCCCCCHHHHHHHHhc
Q psy3461           3 PVKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWEYMHTPEETSKEGQLIKILK   82 (87)
Q Consensus         3 ~v~rr~~~~~t~~er~wQ~~RRGRYvEFNLvyDRGT~FGL~t~g~R~EsILmSlPp~a~W~Y~~~p~~gS~Ea~l~~~l~   82 (87)
                      +|+||++++||++||+||++||||||||||||||||+|||+|+ ||||||||||||.|+|+|+++|++||+|++|+++|+
T Consensus       218 Iv~~r~~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t~-gr~esILmSlPp~~~W~y~~~~~~~s~e~~l~~~l~  296 (302)
T d1vjua_         218 IVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSG-GRTESILISLPPRARWGYNWQPEPGTPEARLTEYFL  296 (302)
T ss_dssp             HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTT-CCHHHHGGGSCSCCCCCTTCCCCTTSHHHHHHHTHH
T ss_pred             HHHHhcCCCCCHHHHHHHHHhCcEeEEEEEEEecCchhhcccC-CchheeeecCCCcCcccccCCCCCCChHHHHHHHhc
Confidence            5899999999999999999999999999999999999999995 599999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3461          83 NPKEW   87 (87)
Q Consensus        83 ~PrdW   87 (87)
                      +||||
T Consensus       297 ~p~dW  301 (302)
T d1vjua_         297 TKRQW  301 (302)
T ss_dssp             HHCCC
T ss_pred             CCCCC
Confidence            99999