Psyllid ID: psy3517

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
MGKSQWDTLQDTEEINMDSSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Secondary Structure (PSIPRED)
ccccccccHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHccHHHHcccHHHHcccccEEEEEccccEEHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHcHHHHHHHHHHHccccHHccccccccccccccccccEEc
Coil and Loop (DISEMBL)
mgksqwdtlqdteEINMDSSlllkypsicicsdssdvyysdyfpgipvdltMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHnmnisaydhlefpgvvprtflgplfi
Flexible Loop (DISEMBL)
mgksqwdtlqdTEEINMDSSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Low Complexity Region (SEG)
MGKSQWDTLQDTEEINMDSSLLLKYPSICICsdssdvyysdyFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Disordered region (IsUnstruct)
******************SSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLF*
Disordered Region (DISOPRED)
**********DTEEINMDSSLLLKY***************DYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Disordered Region (DISEMBL)
MGKSQWDTLQDTEEINMDSSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Disordered Region (DISPRO)
*****WDTLQDTEEINMDSSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGKSQWDTLQDTEEINMDSSLLLKYPSICICSDSSDVYYSDYFPGIPVDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
Q9BV10	488	Dol-P-Man:Man(7)GlcNAc(2)	yes	N/A	0.504	0.116	0.754	3e-21
Q8VDB2	483	Dol-P-Man:Man(7)GlcNAc(2)	no	N/A	0.504	0.118	0.736	5e-21
Q9VH78	678	Probable Dol-P-Man:Man(7)	yes	N/A	0.548	0.091	0.612	1e-17
A8MR93	497	Dol-P-Man:Man(7)GlcNAc(2)	yes	N/A	0.539	0.122	0.557	2e-16
P53730	551	Dol-P-Man:Man(7)GlcNAc(2)	yes	N/A	0.548	0.112	0.619	1e-15
Q23361	492	Probable Dol-P-Man:Man(7)	yes	N/A	0.407	0.093	0.638	9e-12
Q9USD4	546	Probable Dol-P-Man:Man(7)	yes	N/A	0.557	0.115	0.464	4e-11

>sp|Q9BV10|ALG12_HUMAN Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Homo sapiens GN=ALG12 PE=1 SV=1

 Score =  100 bits (249), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 57  LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
           +AVATVHL ICP+TKVEESFNLQA HD+ YH  ++  YDHLEFPGVVPRTFLGP+ I
Sbjct: 18  VAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEFPGVVPRTFLGPVVI 74

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 6EC: 0

>sp|Q8VDB2|ALG12_MOUSE Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Mus musculus GN=Alg12 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/57 (73%), Positives = 48/57 (84%)

Query: 57  LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
           + VAT+HL ICP+TKVEESFNLQA HD+ YH ++I  YDH EFPGVVPRTFLGPL I
Sbjct: 19  VTVATIHLVICPYTKVEESFNLQATHDLLYHQLDIDKYDHHEFPGVVPRTFLGPLVI 75

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

>sp|Q9VH78|ALG12_DROME Probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Drosophila melanogaster GN=CG8412 PE=2 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/62 (61%), Positives = 44/62 (70%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD +    A  HL   PFTKVEESFNLQAMHDI Y   N + YDH ++PGVVPRTF+GPL
Sbjct: 1   MDILIFVTAAAHLVYTPFTKVEESFNLQAMHDILYLRNNFTQYDHHDYPGVVPRTFIGPL 60

Query: 112 FI 113
            +
Sbjct: 61  VV 62

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

>sp|A8MR93|ALG12_ARATH Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Arabidopsis thaliana GN=ALG12 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/61 (55%), Positives = 48/61 (78%)

Query: 53  DSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLF 112
           D +  +VA +++ + P+TKVEESFN+Q+MHDI YH  ++ +YDHLEFPGVVPRTF+G   
Sbjct: 17  DLILGSVAAIYVVMAPYTKVEESFNVQSMHDILYHRHHLDSYDHLEFPGVVPRTFIGAFI 76

Query: 113 I 113
           +
Sbjct: 77  V 77

Required for N-linked oligosaccharide assembly. Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor dolichol-PP-Man(7)GlcNAc(2).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

>sp|P53730|ALG12_YEAST Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG12 PE=1 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIF-YHNMNISAYDHLEFPGVVPRTFLGP 110
           +D+V L V + HL   PFTKVEESFN+QA+HDI  Y   +IS YDHL+FPGVVPRTF+G 
Sbjct: 6   LDTVLLTVISFHLIQAPFTKVEESFNIQAIHDILTYSVFDISQYDHLKFPGVVPRTFVGA 65

Query: 111 LFI 113
           + I
Sbjct: 66  VII 68

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

>sp|Q23361|ALG12_CAEEL Probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Caenorhabditis elegans GN=ZC513.5 PE=1 SV=2

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 66  ICPFTKVEESFNLQAMHDIFYH-NMNISAYDHLEFPGVVPRTFLGPL 111
           + P TKVEESFN+QA HD+ +H   N+S YDH +FPGVVPRTF+GP+
Sbjct: 18  LAPGTKVEESFNVQATHDLMFHLPTNLSNYDHSQFPGVVPRTFIGPI 64

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

>sp|Q9USD4|ALG12_SCHPO Probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg12 PE=3 SV=2

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 8/71 (11%)

Query: 51  TMDSVALAVATVHLAIC--------PFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGV 102
           + +S+   +A + L  C        PFTKVEESF +QA+HDI  +  ++S YDHLEFPG 
Sbjct: 3   SKESICWYLANILLVTCIGYYSYKTPFTKVEESFAMQAIHDIQTYRWDLSKYDHLEFPGA 62

Query: 103 VPRTFLGPLFI 113
           V R+F+  LFI
Sbjct: 63  VKRSFIPSLFI 73


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.138    0.427 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,696,393
Number of Sequences: 539616
Number of extensions: 1424442
Number of successful extensions: 2993
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2984
Number of HSP's gapped (non-prelim): 7
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)

Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
91094203	744	PREDICTED: similar to glycosyltransferas	0.548	0.083	0.741	1e-21
291240121	461	PREDICTED: alpha-1,6-mannosyltransferase	0.539	0.132	0.737	7e-21
328698422	528	PREDICTED: probable dolichyl-P-Man:Man(7	0.548	0.117	0.725	1e-20
340727354	1038	PREDICTED: hypothetical protein LOC10065	0.548	0.059	0.709	2e-20
383849162	930	PREDICTED: probable Dol-P-Man:Man(7)GlcN	0.548	0.066	0.709	4e-20
307191573	1081	Probable dolichyl-P-Man:Man(7)GlcNAc(2)-	0.548	0.057	0.661	5e-20
22266724	683	membrane protein SB87 precursor [Homo sa	0.504	0.083	0.754	6e-20
332030577	967	Putative dolichyl-P-Man:Man(7)GlcNAc(2)-	0.548	0.064	0.661	7e-20
72062494	461	PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-	0.584	0.143	0.681	7e-20
391334282	507	PREDICTED: probable Dol-P-Man:Man(7)GlcN	0.575	0.128	0.692	7e-20

>gi|91094203|ref|XP_971608.1| PREDICTED: similar to glycosyltransferase [Tribolium castaneum] gi|270010912|gb|EFA07360.1| hypothetical protein TcasGA2_TC015960 [Tribolium castaneum]

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/62 (74%), Positives = 50/62 (80%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           M  + L +A  HL  CPFTKVEESFNLQAMHDI YH  N+S YDHLEFPGVVPRTF+GPL
Sbjct: 1   MVQIMLIIAAAHLVYCPFTKVEESFNLQAMHDILYHKWNLSQYDHLEFPGVVPRTFIGPL 60

Query: 112 FI 113
           FI
Sbjct: 61  FI 62

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291240121|ref|XP_002739970.1| PREDICTED: alpha-1,6-mannosyltransferase ALG12-like [Saccoglossus kowalevskii]

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 52/61 (85%)

Query: 53  DSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLF 112
           +S+ L   T+HL ICP+TKVEESFNLQAMHD+ YH  NIS YDHLEFPGVVPRTF+GPLF
Sbjct: 4   ESLLLIAGTLHLVICPYTKVEESFNLQAMHDLLYHQGNISKYDHLEFPGVVPRTFIGPLF 63

Query: 113 I 113
           +
Sbjct: 64  V 64

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|328698422|ref|XP_001952055.2| PREDICTED: probable dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1, 6-mannosyltransferase-like [Acyrthosiphon pisum]

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/62 (72%), Positives = 50/62 (80%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD +   V+  HL +CPFTKVEESFN+QAMHDI Y   N+S YDHLEFPGVVPRTFLGPL
Sbjct: 1   MDKILYIVSATHLILCPFTKVEESFNIQAMHDILYSRTNLSQYDHLEFPGVVPRTFLGPL 60

Query: 112 FI 113
           FI
Sbjct: 61  FI 62

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727354|ref|XP_003402011.1| PREDICTED: hypothetical protein LOC100650099 [Bombus terrestris]

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 50/62 (80%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD + + VA VHL  CPFTKVEESFNLQAMHDI YH  N+S YDH EFPGVVPR+F+GP+
Sbjct: 1   MDHLIILVALVHLLYCPFTKVEESFNLQAMHDILYHGFNLSEYDHHEFPGVVPRSFMGPI 60

Query: 112 FI 113
            I
Sbjct: 61  II 62

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849162|ref|XP_003700215.1| PREDICTED: probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like [Megachile rotundata]

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 50/62 (80%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD + + VA VHL  CPFTKVEESFNLQAMHDI YH  N+S YDH EFPGVVPR+F+GP+
Sbjct: 1   MDHLIILVAMVHLLYCPFTKVEESFNLQAMHDILYHGFNLSEYDHHEFPGVVPRSFVGPI 60

Query: 112 FI 113
            I
Sbjct: 61  II 62

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191573|gb|EFN75071.1| Probable dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1, 6-mannosyltransferase [Harpegnathos saltator]

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 51/62 (82%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD + + V+ VH+  CPFTKVEESFNLQAMHDI YH +N++ YDH EFPGVVPR+FLGP+
Sbjct: 1   MDQLIILVSAVHMLYCPFTKVEESFNLQAMHDILYHGLNLTEYDHHEFPGVVPRSFLGPI 60

Query: 112 FI 113
            +
Sbjct: 61  IV 62

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|22266724|gb|AAM94900.1|AF311904_1 membrane protein SB87 precursor [Homo sapiens]

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 57  LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
           +AVATVHL ICP+TKVEESFNLQA HD+ YH  ++  YDHLEFPGVVPRTFLGP+ I
Sbjct: 18  VAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEFPGVVPRTFLGPVVI 74

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332030577|gb|EGI70265.1| Putative dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1, 6-mannosyltransferase [Acromyrmex echinatior]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 50/62 (80%)

Query: 52  MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
           MD + + V+ VHL  CPFTKVEESFNLQAMHD+ YH  N++ YDH EFPGVVPR+FLGP+
Sbjct: 1   MDQLIILVSVVHLLYCPFTKVEESFNLQAMHDVLYHGFNLTEYDHHEFPGVVPRSFLGPI 60

Query: 112 FI 113
            +
Sbjct: 61  IV 62

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|72062494|ref|XP_795966.1| PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like [Strongylocentrotus purpuratus]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/66 (68%), Positives = 50/66 (75%)

Query: 48  VDLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTF 107
           VDL +  +      VHL  CP+TKVEESFNLQ  HDI +H  NISAYDHLEFPGVVPR+F
Sbjct: 39  VDLGLSILLYVTPLVHLIACPYTKVEESFNLQGTHDILFHRSNISAYDHLEFPGVVPRSF 98

Query: 108 LGPLFI 113
           LGPLFI
Sbjct: 99  LGPLFI 104

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|391334282|ref|XP_003741534.1| PREDICTED: probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like [Metaseiulus occidentalis]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/65 (69%), Positives = 51/65 (78%)

Query: 49  DLTMDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFL 108
           D T   V    A VH+ ICPFTKVEESFNLQA+HD+ +H  N+S+YDHLEFPGVVPRTFL
Sbjct: 7   DRTYKWVLFLSAVVHIVICPFTKVEESFNLQAIHDLLHHRTNLSSYDHLEFPGVVPRTFL 66

Query: 109 GPLFI 113
           GPL I
Sbjct: 67  GPLLI 71

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
UNIPROTKB|F1NKU6	196	ALG12 "Uncharacterized protein	0.504	0.290	0.719	2.7e-20
UNIPROTKB|H9KZJ0	163	H9KZJ0 "Uncharacterized protei	0.504	0.349	0.719	2.7e-20
UNIPROTKB|F1P077	490	ALG12 "Uncharacterized protein	0.504	0.116	0.719	1.3e-19
UNIPROTKB|Q9BV10	488	ALG12 "Dol-P-Man:Man(7)GlcNAc(	0.504	0.116	0.754	1.7e-19
MGI|MGI:2385025	483	Alg12 "asparagine-linked glyco	0.504	0.118	0.736	2.1e-19
UNIPROTKB|G3MWZ3	491	ALG12 "Uncharacterized protein	0.504	0.116	0.719	7.9e-19
RGD|1304826	490	Alg12 "asparagine-linked glyco	0.504	0.116	0.701	2.1e-18
UNIPROTKB|E2R1H6	491	ALG12 "Uncharacterized protein	0.504	0.116	0.684	4.6e-18
ZFIN|ZDB-GENE-041210-295	493	alg12 "asparagine-linked glyco	0.504	0.115	0.666	2.7e-17
FB|FBgn0037743	678	CG8412 [Drosophila melanogaste	0.548	0.091	0.612	8e-16

UNIPROTKB|F1NKU6 ALG12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 41/57 (71%), Positives = 49/57 (85%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             + VA VHL +CPFTKVEESFNLQA+HD+ YH +++  YDH EFPGVVPRTFLGP+FI
Sbjct:    19 IVVAFVHLTVCPFTKVEESFNLQAIHDVVYHQLDLDKYDHHEFPGVVPRTFLGPIFI 75

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|H9KZJ0 H9KZJ0 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 41/57 (71%), Positives = 49/57 (85%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             + VA VHL +CPFTKVEESFNLQA+HD+ YH +++  YDH EFPGVVPRTFLGP+FI
Sbjct:    19 IVVAFVHLTVCPFTKVEESFNLQAIHDVVYHQLDLDKYDHHEFPGVVPRTFLGPIFI 75

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1P077 ALG12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 41/57 (71%), Positives = 49/57 (85%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             + VA VHL +CPFTKVEESFNLQA+HD+ YH +++  YDH EFPGVVPRTFLGP+FI
Sbjct:    19 IVVAFVHLTVCPFTKVEESFNLQAIHDVVYHQLDLDKYDHHEFPGVVPRTFLGPIFI 75

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|Q9BV10 ALG12 "Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             +AVATVHL ICP+TKVEESFNLQA HD+ YH  ++  YDHLEFPGVVPRTFLGP+ I
Sbjct:    18 VAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEFPGVVPRTFLGPVVI 74

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0052917 "dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0006457 "protein folding" evidence=NAS

GO:0006487 "protein N-linked glycosylation" evidence=IGI

GO:0000009 "alpha-1,6-mannosyltransferase activity" evidence=IC

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=IDA;TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

MGI|MGI:2385025 Alg12 "asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)" [Mus musculus (taxid:10090)]

 Score = 238 (88.8 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 42/57 (73%), Positives = 48/57 (84%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             + VAT+HL ICP+TKVEESFNLQA HD+ YH ++I  YDH EFPGVVPRTFLGPL I
Sbjct:    19 VTVATIHLVICPYTKVEESFNLQATHDLLYHQLDIDKYDHHEFPGVVPRTFLGPLVI 75

GO:0000030 "mannosyltransferase activity" evidence=ISA

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=ISO

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=ISA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0052917 "dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity" evidence=IEA

UNIPROTKB|G3MWZ3 ALG12 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 233 (87.1 bits), Expect = 7.9e-19, P = 7.9e-19
 Identities = 41/57 (71%), Positives = 47/57 (82%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             +AVA  HLA CP+TKVEESFNLQA HD+ YH  ++  +DHLEFPGVVPRTFLGPL I
Sbjct:    20 VAVAAAHLAACPYTKVEESFNLQATHDLLYHRSDVEKFDHLEFPGVVPRTFLGPLLI 76

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

RGD|1304826 Alg12 "asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 229 (85.7 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 40/57 (70%), Positives = 46/57 (80%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             + VA +HL  CP+TKVEESFNLQA HD+ YH ++I  YDH EFPGVVPRTFLGPL I
Sbjct:    19 VTVAAIHLVACPYTKVEESFNLQATHDLLYHQLDIDKYDHHEFPGVVPRTFLGPLLI 75

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006487 "protein N-linked glycosylation" evidence=IEA;ISO

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=IEA;ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|E2R1H6 ALG12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 226 (84.6 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 39/57 (68%), Positives = 47/57 (82%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             +AVA +HL  CP+ KVEESFNLQAMHD+ Y+ ++   YDHLEFPGVVPRTFLGPL +
Sbjct:    20 VAVAAIHLITCPYAKVEESFNLQAMHDLLYYRLDTDKYDHLEFPGVVPRTFLGPLAV 76

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-041210-295 alg12 "asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase)" [Danio rerio (taxid:7955)]

 Score = 219 (82.2 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 38/57 (66%), Positives = 46/57 (80%)

Query:    57 LAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPLFI 113
             ++++ +HL  CP+TKVEESFNLQA+HDI YH  +   YDH EFPGVVPRTFLGPL I
Sbjct:    17 ISISLLHLFTCPYTKVEESFNLQAIHDILYHRFDFEKYDHHEFPGVVPRTFLGPLVI 73

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=ISS

GO:0000009 "alpha-1,6-mannosyltransferase activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

FB|FBgn0037743 CG8412 [Drosophila melanogaster (taxid:7227)]

 Score = 208 (78.3 bits), Expect = 8.0e-16, P = 8.0e-16
 Identities = 38/62 (61%), Positives = 44/62 (70%)

Query:    52 MDSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLGPL 111
             MD +    A  HL   PFTKVEESFNLQAMHDI Y   N + YDH ++PGVVPRTF+GPL
Sbjct:     1 MDILIFVTAAAHLVYTPFTKVEESFNLQAMHDILYLRNNFTQYDHHDYPGVVPRTFIGPL 60

Query:   112 FI 113
              +
Sbjct:    61 VV 62

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=ISS

GO:0000009 "alpha-1,6-mannosyltransferase activity" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q23361	ALG12_CAEEL	2, ., 4, ., 1, ., 2, 6, 0	0.6382	0.4070	0.0934	yes	N/A
Q9VH78	ALG12_DROME	2, ., 4, ., 1, ., 2, 6, 0	0.6129	0.5486	0.0914	yes	N/A
Q9BV10	ALG12_HUMAN	2, ., 4, ., 1, ., 2, 6, 0	0.7543	0.5044	0.1168	yes	N/A
A8MR93	ALG12_ARATH	2, ., 4, ., 1, ., 2, 6, 0	0.5573	0.5398	0.1227	yes	N/A
P53730	ALG12_YEAST	2, ., 4, ., 1, ., 2, 6, 0	0.6190	0.5486	0.1125	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
KOG2516|consensus	517		99.97
PF03901	418	Glyco_transf_22: Alg9-like mannosyltransferase fam	97.35

>KOG2516|consensus

Probab=99.97  E-value=1.2e-32  Score=237.26  Aligned_cols=61  Identities=64%  Similarity=1.022  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHcCCcchhhhhhhhhhhhhhhcC-CCCCCCCcccCCCCcccccccccCC
Q psy3517          53 DSVALAVATVHLAICPFTKVEESFNLQAMHDIFYHN-MNISAYDHLEFPGVVPRTFLGPLFI  113 (113)
Q Consensus        53 ~~ll~~~~~~hl~~aPyTKVEESFnlQAiHDiL~~~-~~l~~YDH~~FPGvVPRTFiG~l~l  113 (113)
                      +.++++++.+|++.|||||||||||+||||||++|+ .|+++|||++||||||||||||++|
T Consensus         2 ~~llv~v~~~hli~~PfTKVEESFnlQA~HDil~~~~~~~sqYDHleFPGVVpRTFigplvi   63 (517)
T KOG2516|consen    2 DILLVTVIGYHLIKAPFTKVEESFNLQAIHDILTYRWDDLSQYDHLEFPGVVPRTFIGPLVI   63 (517)
T ss_pred             cEEEEEeeeeeeeecCcchHhhhhhHHHHHHHHHhccchhhhcccccCCCcCccccccceee
Confidence            345566788999999999999999999999999998 8999999999999999999999875

>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2

Probab=97.35  E-value=0.00011  Score=59.03  Aligned_cols=49  Identities=16%  Similarity=0.215  Sum_probs=40.0

Q ss_pred             HHHHHHcCCc----chhhhhhhhhhhhhhhcCCCCCCCCcccCCCCccccccc
Q psy3517          61 TVHLAICPFT----KVEESFNLQAMHDIFYHNMNISAYDHLEFPGVVPRTFLG  109 (113)
Q Consensus        61 ~~hl~~aPyT----KVEESFnlQAiHDiL~~~~~l~~YDH~~FPGvVPRTFiG  109 (113)
                      .++++.|.++    |+||+||.|..+..+.+|.+...|||..+||+.++++.+
T Consensus         8 ~~R~~~a~~~~~~f~pDE~fq~~E~ah~~~~g~g~~tWE~~~~~~iRS~~~p~   60 (418)
T PF03901_consen    8 AFRLLNALFPQTSFHPDEYFQSLEPAHRLVFGYGYLTWEWSPFPGIRSWLFPL   60 (418)
T ss_pred             HHHHHHHHhccCCCCCCcccccHHhhhhhhcCccchhhhhccCCCCCChHHHH
Confidence            3455554444    999999999999888888999999999999998887754

4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00