Psyllid ID: psy363


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------6
MSALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRLKMK
cccEEEEEEccccccEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHcc
cccEEEEEccccccccEEEEEEEEEccccccccccccccccccHHHHEHHHHHHHHccc
msalqisfnsqepnhgfiKEWTLmihgtrdppysslpvsdphskLAIVKKAHQDRLKMK
msalqisfnsqepnhGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAhqdrlkmk
MSALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRLKMK
***************GFIKEWTLMIHG********************************
**ALQ******EPNHGFIKEWTLMIHGTRDPPY**************************
MSALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK*********
**ALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQD*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooo
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRLKMK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query59 2.2.26 [Sep-21-2011]
P28841637 Neuroendocrine convertase yes N/A 0.796 0.073 0.489 2e-06
P21661637 Neuroendocrine convertase yes N/A 0.796 0.073 0.489 2e-06
Q5REC2638 Neuroendocrine convertase yes N/A 0.796 0.073 0.489 2e-06
P16519638 Neuroendocrine convertase no N/A 0.796 0.073 0.489 2e-06
Q03333638 Neuroendocrine convertase yes N/A 0.796 0.073 0.468 6e-06
Q9GLR0638 Neuroendocrine convertase yes N/A 0.796 0.073 0.468 9e-06
>sp|P28841|NEC2_RAT Neuroendocrine convertase 2 OS=Rattus norvegicus GN=Pcsk2 PE=1 SV=1 Back     alignment and function desciption
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 29/47 (61%)

Query: 4   LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
           L++ F    P  G +KEWTLM+HGT+  PY    V D  SKLA+ KK
Sbjct: 569 LELGFVGSAPQKGLLKEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 615




Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 9EC: 4
>sp|P21661|NEC2_MOUSE Neuroendocrine convertase 2 OS=Mus musculus GN=Pcsk2 PE=2 SV=1 Back     alignment and function description
>sp|Q5REC2|NEC2_PONAB Neuroendocrine convertase 2 OS=Pongo abelii GN=PCSK2 PE=2 SV=1 Back     alignment and function description
>sp|P16519|NEC2_HUMAN Neuroendocrine convertase 2 OS=Homo sapiens GN=PCSK2 PE=2 SV=2 Back     alignment and function description
>sp|Q03333|NEC2_PIG Neuroendocrine convertase 2 OS=Sus scrofa GN=PCSK2 PE=2 SV=1 Back     alignment and function description
>sp|Q9GLR0|NEC2_BOVIN Neuroendocrine convertase 2 OS=Bos taurus GN=PCSK2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query59
307167444 634 Neuroendocrine convertase 2 [Camponotus 0.898 0.083 0.716 9e-18
66508837 723 PREDICTED: neuroendocrine convertase 2 i 0.881 0.071 0.711 2e-17
380026023 724 PREDICTED: neuroendocrine convertase 2-l 0.881 0.071 0.711 2e-17
350417414 723 PREDICTED: LOW QUALITY PROTEIN: neuroend 0.881 0.071 0.711 3e-17
340714129 723 PREDICTED: LOW QUALITY PROTEIN: neuroend 0.881 0.071 0.711 3e-17
91086241 630 PREDICTED: similar to AGAP002176-PA [Tri 0.932 0.087 0.709 4e-17
322801547 584 hypothetical protein SINV_80111 [Solenop 0.881 0.089 0.711 5e-17
270009864 652 hypothetical protein TcasGA2_TC009181 [T 0.932 0.084 0.709 5e-17
332023542 634 Neuroendocrine convertase 2 [Acromyrmex 0.898 0.083 0.679 8e-17
307208425 634 Neuroendocrine convertase 2 [Harpegnatho 0.898 0.083 0.660 2e-16
>gi|307167444|gb|EFN61020.1| Neuroendocrine convertase 2 [Camponotus floridanus] Back     alignment and taxonomy information
 Score = 94.4 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/53 (71%), Positives = 50/53 (94%)

Query: 4   LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRL 56
           L++SFN+Q+P HG++KEWTLM+HGTR+PPY+ L V+DPHSKLAIVKKAH++RL
Sbjct: 579 LEVSFNTQKPQHGWLKEWTLMLHGTREPPYTGLSVADPHSKLAIVKKAHEERL 631




Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66508837|ref|XP_392366.2| PREDICTED: neuroendocrine convertase 2 isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|380026023|ref|XP_003696761.1| PREDICTED: neuroendocrine convertase 2-like [Apis florea] Back     alignment and taxonomy information
>gi|350417414|ref|XP_003491411.1| PREDICTED: LOW QUALITY PROTEIN: neuroendocrine convertase 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340714129|ref|XP_003395584.1| PREDICTED: LOW QUALITY PROTEIN: neuroendocrine convertase 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|91086241|ref|XP_972593.1| PREDICTED: similar to AGAP002176-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|322801547|gb|EFZ22208.1| hypothetical protein SINV_80111 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|270009864|gb|EFA06312.1| hypothetical protein TcasGA2_TC009181 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332023542|gb|EGI63778.1| Neuroendocrine convertase 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307208425|gb|EFN85804.1| Neuroendocrine convertase 2 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query59
FB|FBgn0023179654 amon "amontillado" [Drosophila 0.932 0.084 0.571 4.3e-12
MGI|MGI:97512637 Pcsk2 "proprotein convertase s 0.796 0.073 0.489 2e-06
RGD|3273637 Pcsk2 "proprotein convertase s 0.796 0.073 0.489 2e-06
UNIPROTKB|F1NUG0547 PCSK2 "Uncharacterized protein 0.796 0.085 0.510 2.1e-06
UNIPROTKB|F1SBI5637 PCSK2 "Neuroendocrine converta 0.796 0.073 0.489 2.6e-06
UNIPROTKB|A7MBJ9638 PCSK2 "Neuroendocrine converta 0.796 0.073 0.489 2.6e-06
UNIPROTKB|F1PKR4638 PCSK2 "Uncharacterized protein 0.796 0.073 0.489 2.6e-06
UNIPROTKB|P16519638 PCSK2 "Neuroendocrine converta 0.796 0.073 0.489 2.6e-06
ZFIN|ZDB-GENE-090608-1703 pcsk2 "proprotein convertase s 0.796 0.066 0.5 3.8e-06
UNIPROTKB|Q03333638 PCSK2 "Neuroendocrine converta 0.796 0.073 0.468 6.9e-06
FB|FBgn0023179 amon "amontillado" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 173 (66.0 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query:     4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRLKMK 59
             L+  FNS +  HG + EW+L++HGT++ PY +L  S PHSKLAIVKKAH+D+ KMK
Sbjct:   600 LEARFNSPQTRHGNLLEWSLVLHGTKEAPYRTLHPSSPHSKLAIVKKAHEDK-KMK 654




GO:0008233 "peptidase activity" evidence=ISS;IDA
GO:0016486 "peptide hormone processing" evidence=ISS;IMP
GO:0004252 "serine-type endopeptidase activity" evidence=ISS;IBA
GO:0035187 "hatching behavior" evidence=IMP
GO:0006508 "proteolysis" evidence=IDA
GO:0005576 "extracellular region" evidence=IDA
GO:0002165 "instar larval or pupal development" evidence=IMP
GO:0033500 "carbohydrate homeostasis" evidence=IMP
GO:0035180 "larval wandering behavior" evidence=IMP
GO:0005615 "extracellular space" evidence=IBA
GO:0016485 "protein processing" evidence=IBA
MGI|MGI:97512 Pcsk2 "proprotein convertase subtilisin/kexin type 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3273 Pcsk2 "proprotein convertase subtilisin/kexin type 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUG0 PCSK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SBI5 PCSK2 "Neuroendocrine convertase 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBJ9 PCSK2 "Neuroendocrine convertase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKR4 PCSK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P16519 PCSK2 "Neuroendocrine convertase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090608-1 pcsk2 "proprotein convertase subtilisin/kexin type 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q03333 PCSK2 "Neuroendocrine convertase 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 59
KOG3526|consensus629 99.72
PF0148387 P_proprotein: Proprotein convertase P-domain; Inte 85.84
>KOG3526|consensus Back     alignment and domain information
Probab=99.72  E-value=3.1e-18  Score=130.47  Aligned_cols=55  Identities=42%  Similarity=0.741  Sum_probs=51.6

Q ss_pred             eeEEEeCCCCCceeEEEEEEEEEeecCCCCCCCCCC--CCCcchHHHHHHHHHhhhh
Q psy363            3 ALQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPV--SDPHSKLAIVKKAHQDRLK   57 (59)
Q Consensus         3 ~L~v~~~~~~~~~G~l~eWtL~LhGT~~~PY~~~~~--~~~~sKL~ivkkah~~~~~   57 (59)
                      +|+++|+|.+++.|+|+||+||||||+++||+-+.|  ++++|||++|||||+++.+
T Consensus       572 ~learf~gp~~~~g~lkew~lmlhgt~eapy~~i~piv~~~~skla~vkkah~ek~~  628 (629)
T KOG3526|consen  572 RLEARFQGPGAHAGTLKEWELMLHGTREAPYNLIEPIVGQTNSKLATVKKAHLEKRS  628 (629)
T ss_pred             EEEEeccCCcccccchhheeeeeeccccCcccccccccccchhhHHHHHHHhhhhhc
Confidence            699999999999999999999999999999977766  9999999999999998865



>PF01483 P_proprotein: Proprotein convertase P-domain; InterPro: IPR002884 This domain, termed the P domain is approximately 150 amino acids in length and C-terminal to a serine endopeptidase domain which belong to MEROPS peptidase family S8 (clan SB), subfamily S8B (kexin) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query59
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 1e-04
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure
 Score = 36.2 bits (83), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 4   LQISFNSQEPNHGFIKEWTLMIHGTRDPP 32
           L+I   S+  N+G + ++TL+++GT    
Sbjct: 442 LEIENTSEANNYGTLTKFTLVLYGTAPEG 470


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query59
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 96.33
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 94.96
3hjr_A600 Extracellular serine protease; kexin, hydrolase; 1 94.59
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 92.28
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
Probab=96.33  E-value=0.0057  Score=43.91  Aligned_cols=30  Identities=30%  Similarity=0.429  Sum_probs=25.0

Q ss_pred             eeEEEeCCCCCceeEEEEEEEEEeecCCCC
Q psy363            3 ALQISFNSQEPNHGFIKEWTLMIHGTRDPP   32 (59)
Q Consensus         3 ~L~v~~~~~~~~~G~l~eWtL~LhGT~~~P   32 (59)
                      +|+|...+.....|.|..|+|.|+||++.|
T Consensus       441 ~l~V~d~~~~~~~G~l~~w~L~~~G~~~~~  470 (471)
T 1p8j_A          441 VLEIENTSEANNYGTLTKFTLVLYGTAPEG  470 (471)
T ss_dssp             EEEEEECSSSCCCEEEEEEEEEEEEECCCC
T ss_pred             EEEEEECCCCCCcEEEEEEEEEEEEecCCC
Confidence            577776655557899999999999999877



>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 59
d1p8ja1136 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mo 3e-04
>d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Proprotein convertase P-domain
domain: Furin, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]
 Score = 33.8 bits (77), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 18/25 (72%)

Query: 4   LQISFNSQEPNHGFIKEWTLMIHGT 28
           L+I   S+  N+G + ++TL+++GT
Sbjct: 107 LEIENTSEANNYGTLTKFTLVLYGT 131


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query59
d1p8ja1136 Furin, C-terminal domain {Mouse (Mus musculus) [Ta 97.11
d2id4a1141 Kexin, C-terminal domain {Baker's yeast (Saccharom 95.96
>d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Proprotein convertase P-domain
domain: Furin, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11  E-value=0.00037  Score=42.49  Aligned_cols=28  Identities=32%  Similarity=0.484  Sum_probs=23.5

Q ss_pred             eeEEEeCCCCCceeEEEEEEEEEeecCC
Q psy363            3 ALQISFNSQEPNHGFIKEWTLMIHGTRD   30 (59)
Q Consensus         3 ~L~v~~~~~~~~~G~l~eWtL~LhGT~~   30 (59)
                      +|+|...+.....|+|+.|+|.||||..
T Consensus       106 tL~V~D~~~~~~~G~L~~w~L~i~Gt~~  133 (136)
T d1p8ja1         106 VLEIENTSEANNYGTLTKFTLVLYGTAP  133 (136)
T ss_dssp             EEEEEECSSSCCCEEEEEEEEEEEEECC
T ss_pred             EEEEEECCCCCCcEEEEEEEEEEEEecC
Confidence            5778766666678999999999999975



>d2id4a1 b.18.1.20 (A:461-601) Kexin, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure