Psyllid ID: psy3753

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------93
MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRIKSQKGI
ccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccEEcccccccEEEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccEEEEEEEEEccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHccccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHcccccEEEcccccEEEcccccccHHHHHHHHHHcccccccccccccEEEcccHHcccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHcccccEEEccccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcccccccccccccccccccccccHHHHHccccEEEccccccccccccccccEEEcccccccEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccc
cccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHcHHHHHHHHHHHHHHHHHHHEEcccccccHHHHHHHHHHHHHHcccccEEEccccEEcccccHccHHHHHHHHHHccEEEEEccccEEEEEcccccccccccccccccHHHHHHHHcccccccHHHcccEEEEEEcccHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEccHcEEcccccHHHHHHHHHHHHHccccccccccHcHEEEcccccHHHHHHHccHHHHHHHHHHHccHHHHHcccEEEEEEcccccccccccEEEEEEEEEccccEEEEEEEcccccccccEccEccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHcccccHHHHHccccEEHHHHHHccccHHHHcccccEEEccccHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHccccccccEEEEEcccccccHHHHHccccccEEEEcccccccccHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcHHHHHHHccHHHccHHHHHHHHccccHHHccHHHHHHHHHHHHHEEcccccccEEEEcccccHHHHHHHHHHHHccccHHHHHHccccEccccccccccccccccccccEEEccccccHcccEEEcccEEEEEccccc
myhydkydHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKydrnyghfttrqNIQFNWiklkespdiLENLASVEMHAIQTSgncirnitsdelsgvsfdeiidtrpYAEILRQWstfhpefaylprkfkisisgsqEDRAAIFVHDIGLRAIKNKLGKIGFCVIvgggmgrtpiIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEwknikngpstlTLEELKRVKKYfitpkyktlpknsiILKEKCKHNKEFENWVHqntkkhkiNGYIIVILSLKrinmapgditsEQMNFIANLadhysfselrVTHTQNIVLSDVTKDNLFNLWTEIKQYglsesninlltdiiccpggdfcslantkslpiAKNIMKYFSkddqrnigkislnisgcinscghhhignigilglnkngnEYFQILIGgsqgnklnfgkiigpsfsadqvPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFnsnnnlnigiwiNSDEYSEELKCVLKKNPKQFKVIAINFikftdgrgysiAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSekyqtsadekiplnSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVyyplnsevnnYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALignkswitgqrrtqsitrsnlvlkekdiihngiikfnplynWLEKDIWNYIntynvpyntlydngylsigcepctrptekgkdirsgrwwwensnikecglhvldgkLIRIKSQKGI
myhydkydhqlvkerviqyRDQVRRrlsnelseeefIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNeewknikngpstltLEELKRVKKyfitpkyktlpknsiILKEKCKHNKEFENwvhqntkkhkinGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPsfsadqvpdIINRILKVYLRRCYLMCKIikndtivndnWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINfikftdgrgYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTlntgrlhseTLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVkplkkalignkswitgqrrtqsitrsnlvlkekdiihngiikFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRptekgkdirsgrwwwensnikecglhvldgkliriksqkgi
MYHYDKYDHQLVKERVIQYRDQVrrrlsnelseeeFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCghhhignigilglnkngnEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRIKSQKGI
****DKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRI******
MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGK**********
MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRIKSQKGI
MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRIKS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCYLMCKIIKNDTIVNDNWKMLYENDFIEENVKLLEDHVIVPFKFLKKYLKFNSNNNLNIGIWINSDEYSEELKCVLKKNPKQFKVIAINFIKFTDGRGYSIAYNLRMKFNYTGELRAIGDVLQDQLFYMKRVGFNSFVIRHDKNINSALHGLNIFSEKYQTSADEKIPLNSFVKTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLNKIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKSWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLIRIKSQKGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query928 2.2.26 [Sep-21-2011]
Q9JRT1246 Phosphoadenosine phosphos yes N/A 0.232 0.878 0.527 4e-66
Q9JUD5244 Phosphoadenosine phosphos yes N/A 0.232 0.885 0.527 7e-66
P56891265 Phosphoadenosine phosphos no N/A 0.216 0.758 0.465 9e-51
Q73YC1555 Sulfite reductase [ferred N/A N/A 0.459 0.767 0.260 4e-47
Q8UH67260 Phosphoadenosine phosphos no N/A 0.216 0.773 0.440 2e-45
P92981 454 5'-adenylylsulfate reduct yes N/A 0.206 0.422 0.410 5e-44
Q73XV0555 Sulfite reductase [ferred N/A N/A 0.466 0.780 0.267 8e-44
Q6Z4A7 475 Probable 5'-adenylylsulfa yes N/A 0.220 0.431 0.386 2e-43
O05927267 Phosphoadenosine phosphos no N/A 0.237 0.823 0.393 2e-42
Q02KP7267 Phosphoadenosine phosphos no N/A 0.237 0.823 0.393 2e-42
>sp|Q9JRT1|CYSH_NEIMB Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup B (strain MC58) GN=cysH1 PE=3 SV=1 Back     alignment and function desciption
 Score =  253 bits (647), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)

Query: 697 KTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLN 756
           +T+   L+ IV  ++ A FASSLAAEDMV+TDLI   N +I IFTL+TG LH+ETLN+L+
Sbjct: 29  ETLKQRLHRIVGSHRDARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLD 88

Query: 757 KIYLTYKY-KIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNK 815
           ++   Y + +IK + P+  + + Y+   G  AFYDSV+ R++CC IRK +PL +A+ G  
Sbjct: 89  RLGRAYPHLRIKRFRPVREDADRYVESKGRFAFYDSVEARRECCRIRKTEPLNRAIAGAD 148

Query: 816 SWITGQRRTQSITRSNLVLKEKDIIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNTLYDN 875
           +W+TGQRR QS TR+ L   E D    GI K+NP+++W E D+W YI   NVPYN LY  
Sbjct: 149 AWLTGQRREQSATRTELPFAEYDA-GRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQ 207

Query: 876 GYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLH 913
           G+ SIGC+PCTRP + G+DIR+GRWWWE  N KECGLH
Sbjct: 208 GFPSIGCDPCTRPVKAGEDIRAGRWWWEGRNSKECGLH 245
Reduction of activated sulfate into sulfite.
Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586)
EC: 1EC: .EC: 8EC: .EC: 4EC: .EC: 8
>sp|Q9JUD5|CYSH_NEIMA Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=cysH PE=3 SV=1 Back     alignment and function description
>sp|P56891|CYSH_RHIME Phosphoadenosine phosphosulfate reductase OS=Rhizobium meliloti (strain 1021) GN=cysH PE=3 SV=1 Back     alignment and function description
>sp|Q73YC1|SIR1_MYCPA Sulfite reductase [ferredoxin] 1 OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=sir1 PE=3 SV=1 Back     alignment and function description
>sp|Q8UH67|CYSH_AGRT5 Phosphoadenosine phosphosulfate reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysH PE=3 SV=1 Back     alignment and function description
>sp|P92981|APR2_ARATH 5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=1 SV=2 Back     alignment and function description
>sp|Q73XV0|SIR2_MYCPA Sulfite reductase [ferredoxin] 2 OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=sir2 PE=3 SV=1 Back     alignment and function description
>sp|Q6Z4A7|APR1_ORYSJ Probable 5'-adenylylsulfate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=APR1 PE=2 SV=1 Back     alignment and function description
>sp|O05927|CYSH_PSEAE Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cysH PE=1 SV=2 Back     alignment and function description
>sp|Q02KP7|CYSH_PSEAB Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query928
152979850564 sulfite reductase (NADPH) hemoprotein be 0.562 0.925 0.671 0.0
399017226564 sulfite reductase, beta subunit (hemopro 0.563 0.927 0.673 0.0
134095569564 sulfite reductase [Herminiimonas arsenic 0.562 0.925 0.667 0.0
398832712565 sulfite reductase, beta subunit (hemopro 0.561 0.922 0.672 0.0
300312399565 sulfite reductase subunit beta [Herbaspi 0.563 0.925 0.669 0.0
409406829565 sulfite reductase subunit beta [Herbaspi 0.563 0.925 0.669 0.0
415948478565 Sulfite reductase [Herbaspirillum frisin 0.563 0.925 0.664 0.0
340788689581 sulfite reductase [NADPH] hemoprotein be 0.563 0.900 0.654 0.0
445495660565 putative nitrite/sulfite reductase [Jant 0.565 0.929 0.650 0.0
395761409562 sulfite reductase [Janthinobacterium liv 0.558 0.921 0.645 0.0
>gi|152979850|ref|YP_001354142.1| sulfite reductase (NADPH) hemoprotein beta-component [Janthinobacterium sp. Marseille] gi|151279927|gb|ABR88337.1| sulfite reductase (NADPH) hemoprotein beta-component [Janthinobacterium sp. Marseille] Back     alignment and taxonomy information
 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/523 (67%), Positives = 436/523 (83%), Gaps = 1/523 (0%)

Query: 1   MYHYDKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQRYAYMLRIAIPY 60
           MY YD+YDHQ+VKER+ QYRDQVRRRLS+EL+E+EF +LRLQNGLYLQR+AYMLRIA+PY
Sbjct: 1   MYRYDQYDHQIVKERIAQYRDQVRRRLSDELAEDEFRILRLQNGLYLQRHAYMLRIAVPY 60

Query: 61  GMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSG 120
           G+LSS QMRM  +IA+KYDR YGHFTTRQNIQFNWIKL+E+PDIL  LASVEMHAIQTSG
Sbjct: 61  GLLSSAQMRMFGHIARKYDRGYGHFTTRQNIQFNWIKLEETPDILTELASVEMHAIQTSG 120

Query: 121 NCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAI 180
           NCIRN TSDEL+GV+ DEI+D RPYAEI+R+WSTFHPEFAYLPRKFKI+I+G+ EDRAA 
Sbjct: 121 NCIRNTTSDELAGVAADEIVDPRPYAEIIREWSTFHPEFAYLPRKFKIAINGAVEDRAAT 180

Query: 181 FVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQY 240
            VHDIGL  IKN+ G++GF V+VGGGMGRTPI+G +IC+FLPW+H++TY+EAILR+YNQY
Sbjct: 181 AVHDIGLHVIKNEEGEVGFRVLVGGGMGRTPILGSVICEFLPWRHVMTYLEAILRVYNQY 240

Query: 241 GRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKT 300
           GRRDNIYK+RIKIL+K+IGI+ ++ QV  EW++IK+GP TLT EEL+RV  +F  P Y T
Sbjct: 241 GRRDNIYKARIKILVKAIGIDEYRRQVEAEWQDIKDGPGTLTEEELQRVAAFFTMPAYDT 300

Query: 301 LPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIA 360
           LP +    ++    NK F +W+ +N K HK++GY  V+LS+K+  + PGD T+EQ++F+A
Sbjct: 301 LPASDAEFEKHKAENKAFNSWLTRNVKPHKVSGYAAVVLSMKKTGVPPGDATAEQLDFMA 360

Query: 361 NLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDF 420
            LAD YSF ELRVTH QN+VLSDV   +L+ +W   K  GL+  NI LLTDIICCPGGDF
Sbjct: 361 ELADRYSFGELRVTHEQNVVLSDVRIADLYAVWEAAKSQGLATPNIGLLTDIICCPGGDF 420

Query: 421 CSLANTKSLPIAKNIMKYFSK-DDQRNIGKISLNISGCINSCGHHHIGNIGILGLNKNGN 479
           CSLAN KS+PIA+ I + F   D Q +IG I LNISGCIN+CGHHH+GNIGILG++K+G 
Sbjct: 421 CSLANAKSIPIAEAIAERFDNLDFQHDIGDIELNISGCINACGHHHVGNIGILGVDKDGA 480

Query: 480 EYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLR 522
           E++Q+ IGG+QGN  + GKIIGPSFSA Q+P +I R+L+VY+R
Sbjct: 481 EWYQVSIGGAQGNTSSIGKIIGPSFSAHQMPIVIERLLEVYVR 523

Source: Janthinobacterium sp. Marseille

Species: Janthinobacterium sp. Marseille

Genus: Janthinobacterium

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|399017226|ref|ZP_10719424.1| sulfite reductase, beta subunit (hemoprotein) [Herbaspirillum sp. CF444] gi|398104130|gb|EJL94284.1| sulfite reductase, beta subunit (hemoprotein) [Herbaspirillum sp. CF444] Back     alignment and taxonomy information
>gi|134095569|ref|YP_001100644.1| sulfite reductase [Herminiimonas arsenicoxydans] gi|133739472|emb|CAL62523.1| Sulfite reductase [Herminiimonas arsenicoxydans] Back     alignment and taxonomy information
>gi|398832712|ref|ZP_10590868.1| sulfite reductase, beta subunit (hemoprotein) [Herbaspirillum sp. YR522] gi|398222869|gb|EJN09228.1| sulfite reductase, beta subunit (hemoprotein) [Herbaspirillum sp. YR522] Back     alignment and taxonomy information
>gi|300312399|ref|YP_003776491.1| sulfite reductase subunit beta [Herbaspirillum seropedicae SmR1] gi|300075184|gb|ADJ64583.1| sulfite reductase, beta subunit (hemoprotein) protein [Herbaspirillum seropedicae SmR1] Back     alignment and taxonomy information
>gi|409406829|ref|ZP_11255291.1| sulfite reductase subunit beta [Herbaspirillum sp. GW103] gi|386435378|gb|EIJ48203.1| sulfite reductase subunit beta [Herbaspirillum sp. GW103] Back     alignment and taxonomy information
>gi|415948478|ref|ZP_11556749.1| Sulfite reductase [Herbaspirillum frisingense GSF30] gi|407757893|gb|EKF67799.1| Sulfite reductase [Herbaspirillum frisingense GSF30] Back     alignment and taxonomy information
>gi|340788689|ref|YP_004754154.1| sulfite reductase [NADPH] hemoprotein beta-component [Collimonas fungivorans Ter331] gi|340553956|gb|AEK63331.1| Sulfite reductase [NADPH] hemoprotein beta-component [Collimonas fungivorans Ter331] Back     alignment and taxonomy information
>gi|445495660|ref|ZP_21462704.1| putative nitrite/sulfite reductase [Janthinobacterium sp. HH01] gi|444791821|gb|ELX13368.1| putative nitrite/sulfite reductase [Janthinobacterium sp. HH01] Back     alignment and taxonomy information
>gi|395761409|ref|ZP_10442078.1| sulfite reductase [Janthinobacterium lividum PAMC 25724] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query928
UNIPROTKB|Q4KAG6552 cysI_2 "Sulfite reductase (NAD 0.563 0.947 0.519 5.2e-152
UNIPROTKB|Q48IH0552 cysI "Sulfite reductase (NADPH 0.563 0.947 0.511 2e-150
UNIPROTKB|Q4KCU2557 cysI_1 "Sulfite reductase (NAD 0.562 0.937 0.517 2.1e-148
UNIPROTKB|Q0C5D8552 HNE_0325 "Putative sulfite red 0.559 0.940 0.471 5e-131
TIGR_CMR|SPO_2634554 SPO_2634 "sulfite reductase, p 0.556 0.931 0.442 5.4e-118
TIGR_CMR|GSU_1716235 GSU_1716 "phosphoadenosine pho 0.246 0.974 0.412 2.4e-43
TAIR|locus:2018097 454 APR2 "5'adenylylphosphosulfate 0.228 0.466 0.378 2.4e-39
TAIR|locus:2125786 465 APR1 "APS reductase 1" [Arabid 0.228 0.455 0.373 1.1e-38
TAIR|locus:2120628 458 APR3 "APS reductase 3" [Arabid 0.205 0.417 0.407 7.8e-38
UNIPROTKB|Q81T46540 BAS1333 "Putative sulfite redu 0.243 0.418 0.321 2e-36
UNIPROTKB|Q4KAG6 cysI_2 "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
 Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
 Identities = 272/524 (51%), Positives = 376/524 (71%)

Query:     1 MYHYDKYDHQLVKERVIQYRDQVXXXXXXXXXXXXFIVLRLQNGLYLQRYAYMLRIAIPY 60
             MY YD+YD +++++RV Q+RDQ             F  LRLQNGLY+QR+A MLR+A+PY
Sbjct:     1 MYVYDEYDQRIIEDRVKQFRDQTRRYLAGELSEEEFRPLRLQNGLYIQRFAPMLRVAVPY 60

Query:    61 GMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSG 120
             G L+S+Q RM++ IA+ YD+ Y H +TRQN+QFNW  L++ PDIL  LA+V+MHAIQTSG
Sbjct:    61 GQLTSRQARMMAKIARDYDKGYAHISTRQNVQFNWPALEDIPDILAELATVQMHAIQTSG 120

Query:   121 NCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAAI 180
             NC+RN+T+D+ +GV+ DE+ID RP+ EI+RQW+TFHPEFAYLPRKFKI+I+GS  DRAAI
Sbjct:   121 NCLRNVTTDQFAGVAADELIDPRPWCEIVRQWTTFHPEFAYLPRKFKIAINGSTSDRAAI 180

Query:   181 FVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQY 240
              VHDIGL  + N  G++GF V+VGGG+GRTP++G  I +FLPW+ +L+Y++AILR+YN+Y
Sbjct:   181 EVHDIGLEPVYNAAGELGFRVLVGGGLGRTPVVGAFINEFLPWQDLLSYLDAILRVYNRY 240

Query:   241 GRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKT 300
             GRRDN YK+RIKIL+K++  E F  +V  E  +++ G +TLT  E+ RV K+F+ P YKT
Sbjct:   241 GRRDNKYKARIKILVKALTPEVFAEKVEAEMAHLRGGQTTLTDAEVHRVAKHFVDPDYKT 300

Query:   301 LPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIA 360
             L      L    + +  F  W  +NT  HK  GY+ V LSLK   +APGD+T +Q + IA
Sbjct:   301 LSNQDAELAALDQQHPGFARWRTRNTLAHKKPGYVAVTLSLKPTGVAPGDVTDKQFDAIA 360

Query:   361 NLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDF 420
             +LAD YSF +LR +H QNI+L+DV +  LF LW E+++ G +  NI LLTDIICCPGGDF
Sbjct:   361 DLADRYSFGQLRTSHEQNIILADVEQSQLFTLWGELRENGFATPNIGLLTDIICCPGGDF 420

Query:   421 CSLANTKSLPIAKNIMKYFSKDDQR-NIGKISLNISGCINSCXXXXXXXXXXXXXXXXXX 479
             CSLAN KS+PIA++I + F   D   +IG++ LNISGC+N+C                  
Sbjct:   421 CSLANAKSIPIAESIQRRFDDLDYLFDIGELDLNISGCMNACGHHHVGHIGILGVDKKGE 480

Query:   480 EYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRR 523
             E++Q+ +GGS     + GKI+GPSF+ D +PD+I++++ VY+ +
Sbjct:   481 EFYQVSLGGSASRDASLGKILGPSFAQDDMPDVISKLIDVYVEQ 524
GO:0004783 "sulfite reductase (NADPH) activity" evidence=ISS
GO:0006790 "sulfur compound metabolic process" evidence=ISS
UNIPROTKB|Q48IH0 cysI "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KCU2 cysI_1 "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C5D8 HNE_0325 "Putative sulfite reductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2634 SPO_2634 "sulfite reductase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1716 GSU_1716 "phosphoadenosine phosphosulfate reductase, putative" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TAIR|locus:2018097 APR2 "5'adenylylphosphosulfate reductase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125786 APR1 "APS reductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120628 APR3 "APS reductase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81T46 BAS1333 "Putative sulfite reductase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9JUD5CYSH_NEIMA1, ., 8, ., 4, ., 80.52750.23270.8852yesN/A
Q9JRT1CYSH_NEIMB1, ., 8, ., 4, ., 80.52750.23270.8780yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.4LOW CONFIDENCE prediction!
4th Layer1.8.4.8LOW CONFIDENCE prediction!
3rd Layer1.8.1LOW CONFIDENCE prediction!
4th Layer1.8.1.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query928
COG0155510 COG0155, CysI, Sulfite reductase, beta subunit (he 1e-170
PRK02090241 PRK02090, PRK02090, phosphoadenosine phosphosulfat 8e-82
TIGR02055191 TIGR02055, APS_reductase, thioredoxin-dependent ad 3e-78
PRK09566513 PRK09566, nirA, ferredoxin-nitrite reductase; Revi 5e-60
COG0175261 COG0175, CysH, 3'-phosphoadenosine 5'-phosphosulfa 4e-57
PRK09567593 PRK09567, nirA, ferredoxin-nitrite reductase; Revi 2e-54
PLN02309 457 PLN02309, PLN02309, 5'-adenylylsulfate reductase 3e-54
TIGR00424 463 TIGR00424, APS_reduc, 5'-adenylylsulfate reductase 1e-49
PLN02431587 PLN02431, PLN02431, ferredoxin--nitrite reductase 2e-49
pfam06073110 pfam06073, DUF934, Bacterial protein of unknown fu 5e-46
TIGR00434212 TIGR00434, cysH, phosophoadenylyl-sulfate reductas 6e-45
pfam01077154 pfam01077, NIR_SIR, Nitrite and sulphite reductase 9e-45
cd01713173 cd01713, PAPS_reductase, This domain is found in p 6e-42
pfam01507173 pfam01507, PAPS_reduct, Phosphoadenosine phosphosu 1e-41
COG3749167 COG3749, COG3749, Uncharacterized protein conserve 1e-36
TIGR02057226 TIGR02057, PAPS_reductase, phosphoadenosine phosph 8e-34
TIGR02041541 TIGR02041, CysI, sulfite reductase (NADPH) hemopro 1e-28
PRK13504569 PRK13504, PRK13504, sulfite reductase subunit beta 3e-27
TIGR02042577 TIGR02042, sir, ferredoxin-sulfite reductase 5e-23
PLN00178623 PLN00178, PLN00178, sulfite reductase 3e-20
TIGR02435390 TIGR02435, CobG, precorrin-3B synthase 1e-19
COG2221317 COG2221, DsrA, Dissimilatory sulfite reductase (de 5e-16
pfam0346067 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase 6e-16
COG1251793 COG1251, NirB, NAD(P)H-nitrite reductase [Energy p 6e-16
TIGR02374785 TIGR02374, nitri_red_nirB, nitrite reductase [NAD( 8e-16
pfam01077154 pfam01077, NIR_SIR, Nitrite and sulphite reductase 3e-15
pfam0346067 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase 1e-10
PRK08557417 PRK08557, PRK08557, hypothetical protein; Provisio 2e-09
PRK13795 636 PRK13795, PRK13795, hypothetical protein; Provisio 5e-09
TIGR02435390 TIGR02435, CobG, precorrin-3B synthase 7e-09
COG2221317 COG2221, DsrA, Dissimilatory sulfite reductase (de 1e-08
COG1251793 COG1251, NirB, NAD(P)H-nitrite reductase [Energy p 2e-08
TIGR02374785 TIGR02374, nitri_red_nirB, nitrite reductase [NAD( 5e-07
PRK13794479 PRK13794, PRK13794, hypothetical protein; Provisio 7e-07
PRK09567593 PRK09567, nirA, ferredoxin-nitrite reductase; Revi 6e-06
TIGR02912314 TIGR02912, sulfite_red_C, sulfite reductase, subun 0.001
>gnl|CDD|223233 COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information 
 Score =  506 bits (1304), Expect = e-170
 Identities = 182/528 (34%), Positives = 276/528 (52%), Gaps = 51/528 (9%)

Query: 1   MYHYDKYD-HQLVKERVI---QYRDQVRRRLSNELSEEEFIVLRLQNGLYLQR--YAYML 54
           M  YD  D  +L  E         DQ+  RLS  L E++F  L   +GLYLQ   +A+ML
Sbjct: 1   MAPYDPLDNERLKAESNFLRGTIEDQLSDRLSGGLCEDDFRPLLKFDGLYLQEPDHAFML 60

Query: 55  RIAIPYGMLSSKQMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMH 114
           R+ IP G+LS KQ+R L+ IA++Y R     TTRQNIQF+ I+ K+ P+IL  LASV +H
Sbjct: 61  RVRIPGGILSPKQLRALADIARRYGRGTIELTTRQNIQFHGIRKKDVPEILAELASVGLH 120

Query: 115 AIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQ 174
            I T+G+  RN+T D L+G+  DEI D RP AEILR W      FAYLPRKFKI++ G  
Sbjct: 121 TIATAGDVARNVTGDPLAGLDADEIADPRPLAEILRIWLDGEKGFAYLPRKFKIAVDGGP 180

Query: 175 EDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRT-PIIGQIICKFLPWKHILTYIEAI 233
           ++   + ++DIG  AIK   G +GF V+VGGG+GRT P     + +F+P + +L  +EAI
Sbjct: 181 DNDVDVLINDIGFVAIKENDGLLGFNVLVGGGLGRTHPKTAPRLAEFVPPEDVLEVVEAI 240

Query: 234 LRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYF 293
           +R+Y  YGRR N  K+R+K L++++G+E F+ +V                       K F
Sbjct: 241 VRVYRDYGRRANRKKARLKYLVEALGVEKFRREVEPRL------------------GKPF 282

Query: 294 ITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITS 353
              +             +   N +   WV Q      + G  +            G + +
Sbjct: 283 EPAR-----------PREFTGNGDHIGWVPQKDGLWHL-GLAVPN----------GRLKA 320

Query: 354 EQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQYGLSESNINLLTDII 413
           E +  +A  A+   F E+R+T  QN+++ +V +  L  +   +   GL  +  +L  + I
Sbjct: 321 EGLIPLATEAEEIGFGEIRLTPNQNLIIPNVPEAELEAILRILAALGLVTAPSSLRRNSI 380

Query: 414 CCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILG 473
            C G   C+LA  ++   A  I+        ++   I+L+ISGC N CG  H+  IG++G
Sbjct: 381 ACVGLPTCALALAETERDAPRIIARLEDLLDKHGLPITLHISGCPNGCGRPHLAEIGLVG 440

Query: 474 LNKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYL 521
             K G   +Q+ +GG        GK+ G +  A+++ D I+R++  Y 
Sbjct: 441 KAKGG---YQVYLGGGADGTR-GGKLYGENVPAEEILDAIDRLIGRYA 484

Length = 510
>gnl|CDD|234997 PRK02090, PRK02090, phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>gnl|CDD|233701 TIGR02055, APS_reductase, thioredoxin-dependent adenylylsulfate APS reductase Back     alignment and domain information
>gnl|CDD|236572 PRK09566, nirA, ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>gnl|CDD|223253 COG0175, CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|236573 PRK09567, nirA, ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>gnl|CDD|215175 PLN02309, PLN02309, 5'-adenylylsulfate reductase Back     alignment and domain information
>gnl|CDD|232970 TIGR00424, APS_reduc, 5'-adenylylsulfate reductase, thioredoxin-independent Back     alignment and domain information
>gnl|CDD|178050 PLN02431, PLN02431, ferredoxin--nitrite reductase Back     alignment and domain information
>gnl|CDD|191441 pfam06073, DUF934, Bacterial protein of unknown function (DUF934) Back     alignment and domain information
>gnl|CDD|129526 TIGR00434, cysH, phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>gnl|CDD|216287 pfam01077, NIR_SIR, Nitrite and sulphite reductase 4Fe-4S domain Back     alignment and domain information
>gnl|CDD|238846 cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>gnl|CDD|201832 pfam01507, PAPS_reduct, Phosphoadenosine phosphosulfate reductase family Back     alignment and domain information
>gnl|CDD|226272 COG3749, COG3749, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|131112 TIGR02057, PAPS_reductase, phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>gnl|CDD|131096 TIGR02041, CysI, sulfite reductase (NADPH) hemoprotein, beta-component Back     alignment and domain information
>gnl|CDD|237402 PRK13504, PRK13504, sulfite reductase subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|131097 TIGR02042, sir, ferredoxin-sulfite reductase Back     alignment and domain information
>gnl|CDD|177773 PLN00178, PLN00178, sulfite reductase Back     alignment and domain information
>gnl|CDD|233866 TIGR02435, CobG, precorrin-3B synthase Back     alignment and domain information
>gnl|CDD|225131 COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|217572 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase ferredoxin-like half domain Back     alignment and domain information
>gnl|CDD|224171 COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|162827 TIGR02374, nitri_red_nirB, nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>gnl|CDD|216287 pfam01077, NIR_SIR, Nitrite and sulphite reductase 4Fe-4S domain Back     alignment and domain information
>gnl|CDD|217572 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase ferredoxin-like half domain Back     alignment and domain information
>gnl|CDD|181465 PRK08557, PRK08557, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|237510 PRK13795, PRK13795, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|233866 TIGR02435, CobG, precorrin-3B synthase Back     alignment and domain information
>gnl|CDD|225131 COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|224171 COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|162827 TIGR02374, nitri_red_nirB, nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>gnl|CDD|237509 PRK13794, PRK13794, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236573 PRK09567, nirA, ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>gnl|CDD|131958 TIGR02912, sulfite_red_C, sulfite reductase, subunit C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 928
PRK09567593 nirA ferredoxin-nitrite reductase; Reviewed 100.0
PLN02431587 ferredoxin--nitrite reductase 100.0
PRK09566513 nirA ferredoxin-nitrite reductase; Reviewed 100.0
PLN00178623 sulfite reductase 100.0
PRK13504569 sulfite reductase subunit beta; Provisional 100.0
TIGR02042577 sir ferredoxin-sulfite reductase. monomeric enzyme 100.0
COG0155510 CysI Sulfite reductase, beta subunit (hemoprotein) 100.0
TIGR02041541 CysI sulfite reductase (NADPH) hemoprotein, beta-c 100.0
TIGR02435390 CobG precorrin-3B synthase. An iron-sulfur protein 100.0
KOG0560|consensus638 100.0
TIGR02057226 PAPS_reductase phosphoadenosine phosphosulfate red 100.0
TIGR00424 463 APS_reduc 5'-adenylylsulfate reductase, thioredoxi 100.0
PLN02309 457 5'-adenylylsulfate reductase 100.0
TIGR00434212 cysH phosophoadenylyl-sulfate reductase (thioredox 100.0
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 100.0
TIGR02055191 APS_reductase thioredoxin-dependent adenylylsulfat 100.0
COG0175261 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotr 100.0
KOG0189|consensus261 100.0
TIGR02064402 dsrA sulfite reductase, dissimilatory-type alpha s 100.0
PRK08557417 hypothetical protein; Provisional 100.0
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 100.0
COG2221317 DsrA Dissimilatory sulfite reductase (desulfovirid 100.0
TIGR02066341 dsrB sulfite reductase, dissimilatory-type beta su 100.0
COG2221317 DsrA Dissimilatory sulfite reductase (desulfovirid 100.0
TIGR02066341 dsrB sulfite reductase, dissimilatory-type beta su 100.0
PRK13794479 hypothetical protein; Provisional 100.0
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 100.0
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 100.0
PRK13795 636 hypothetical protein; Provisional 100.0
PRK14989847 nitrite reductase subunit NirD; Provisional 100.0
TIGR02374785 nitri_red_nirB nitrite reductase [NAD(P)H], large 100.0
TIGR02064402 dsrA sulfite reductase, dissimilatory-type alpha s 100.0
PRK09567593 nirA ferredoxin-nitrite reductase; Reviewed 100.0
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 100.0
TIGR02912314 sulfite_red_C sulfite reductase, subunit C. Member 100.0
COG3749167 Uncharacterized protein conserved in bacteria [Fun 100.0
PRK09566513 nirA ferredoxin-nitrite reductase; Reviewed 100.0
PF06073110 DUF934: Bacterial protein of unknown function (DUF 100.0
PLN00178623 sulfite reductase 100.0
TIGR02042577 sir ferredoxin-sulfite reductase. monomeric enzyme 100.0
PLN02431587 ferredoxin--nitrite reductase 100.0
PRK14989847 nitrite reductase subunit NirD; Provisional 100.0
TIGR02374785 nitri_red_nirB nitrite reductase [NAD(P)H], large 99.98
TIGR02435390 CobG precorrin-3B synthase. An iron-sulfur protein 99.98
TIGR02041541 CysI sulfite reductase (NADPH) hemoprotein, beta-c 99.97
PRK13504569 sulfite reductase subunit beta; Provisional 99.97
TIGR02912314 sulfite_red_C sulfite reductase, subunit C. Member 99.97
PRK08576438 hypothetical protein; Provisional 99.97
cd01713173 PAPS_reductase This domain is found in phosphoaden 99.96
PF01077157 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S dom 99.96
TIGR03183 447 DNA_S_dndC putative sulfurtransferase DndC. Member 99.96
PRK06850 507 hypothetical protein; Provisional 99.95
COG0155510 CysI Sulfite reductase, beta subunit (hemoprotein) 99.95
COG1251793 NirB NAD(P)H-nitrite reductase [Energy production 99.92
PF01077157 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S dom 99.91
COG3969 407 Predicted phosphoadenosine phosphosulfate sulfotra 99.86
COG1251793 NirB NAD(P)H-nitrite reductase [Energy production 99.86
KOG0560|consensus638 99.77
PF0346069 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin 99.52
PF0346069 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin 99.42
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 99.38
KOG2644|consensus282 99.37
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 99.26
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 99.24
PRK00366360 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s 99.06
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 99.05
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 98.89
PRK00366360 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s 98.88
PRK00074511 guaA GMP synthase; Reviewed 98.85
PRK00919307 GMP synthase subunit B; Validated 98.83
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 98.83
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 98.81
cd01995169 ExsB ExsB is a transcription regulator related pro 98.8
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 98.75
cd01712177 ThiI ThiI is required for thiazole synthesis in th 98.73
TIGR00884311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 98.69
cd01997295 GMP_synthase_C The C-terminal domain of GMP synthe 98.63
PRK14665 360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 98.57
PRK14561194 hypothetical protein; Provisional 98.57
PRK10660 436 tilS tRNA(Ile)-lysidine synthetase; Provisional 98.55
cd01998 349 tRNA_Me_trans tRNA methyl transferase. This family 98.55
PRK00143 346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 98.55
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 98.54
TIGR00420 352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 98.54
PRK08349198 hypothetical protein; Validated 98.49
PLN02347536 GMP synthetase 98.44
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 98.44
PRK13980265 NAD synthetase; Provisional 98.4
TIGR00364201 exsB protein. This protein family is represented b 98.34
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 98.33
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 98.32
TIGR00032 394 argG argininosuccinate synthase. argG in bacteria, 98.28
cd01999 385 Argininosuccinate_Synthase Argininosuccinate synth 98.27
PRK11106231 queuosine biosynthesis protein QueC; Provisional 98.2
PRK13820 394 argininosuccinate synthase; Provisional 98.19
PRK00509 399 argininosuccinate synthase; Provisional 98.18
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 98.16
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 98.15
PRK14664 362 tRNA-specific 2-thiouridylase MnmA; Provisional 98.1
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 98.1
PLN00200 404 argininosuccinate synthase; Provisional 98.1
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 98.07
PRK04527 400 argininosuccinate synthase; Provisional 98.02
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 97.96
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 97.85
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 97.84
PRK01269482 tRNA s(4)U8 sulfurtransferase; Provisional 97.81
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 97.76
COG0603222 Predicted PP-loop superfamily ATPase [General func 97.75
PRK00876326 nadE NAD synthetase; Reviewed 97.66
PTZ00323294 NAD+ synthase; Provisional 97.62
PF03054 356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 97.55
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 97.55
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 97.52
COG0821361 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat 97.51
COG0482 356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 97.47
PRK00768268 nadE NAD synthetase; Reviewed 97.36
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 97.32
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 97.15
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 97.14
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 97.13
KOG2805|consensus 377 96.99
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 96.82
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 96.78
COG0519315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 96.77
COG0821361 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat 96.65
PRK13981540 NAD synthetase; Provisional 96.63
PRK05370 447 argininosuccinate synthase; Validated 96.57
PRK02628679 nadE NAD synthetase; Reviewed 96.48
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 96.35
TIGR00290223 MJ0570_dom MJ0570-related uncharacterized domain. 96.26
PLN02925733 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 96.15
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 96.05
PF00764 388 Arginosuc_synth: Arginosuccinate synthase; InterPr 95.92
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 95.65
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 95.14
PLN02925733 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 95.13
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 95.03
PRK00694606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 94.49
COG0171268 NadE NAD synthase [Coenzyme metabolism] 94.46
cd01916731 ACS_1 Acetyl-CoA synthase (ACS), also known as ace 93.91
PRK02048611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 93.81
COG2102223 Predicted ATPases of PP-loop superfamily [General 93.7
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 93.57
TIGR03104 589 trio_amidotrans asparagine synthase family amidotr 93.4
KOG1622|consensus 552 93.03
PF01902218 ATP_bind_4: ATP-binding region; InterPro: IPR00276 92.59
PRK00694606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 92.5
COG0137 403 ArgG Argininosuccinate synthase [Amino acid transp 91.82
PRK02048611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 91.75
TIGR03108 628 eps_aminotran_1 exosortase 1 system-associated ami 90.66
PTZ00077 586 asparagine synthetase-like protein; Provisional 89.24
PRK09431554 asnB asparagine synthetase B; Provisional 88.54
cd01916731 ACS_1 Acetyl-CoA synthase (ACS), also known as ace 88.0
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 87.91
PRK00941781 acetyl-CoA decarbonylase/synthase complex subunit 86.63
PLN02549 578 asparagine synthase (glutamine-hydrolyzing) 85.74
KOG0573|consensus520 84.55
PLN02339700 NAD+ synthase (glutamine-hydrolysing) 81.89
>PRK09567 nirA ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=2.3e-88  Score=802.45  Aligned_cols=494  Identities=24%  Similarity=0.383  Sum_probs=430.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCHHHHhhccccceeeeec---CeeEEEEEcCCCccCHHHHHHHHHHHHHhCCCeEe
Q psy3753           8 DHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQNGLYLQR---YAYMLRIAIPYGMLSSKQMRMLSYIAKKYDRNYGH   84 (928)
Q Consensus         8 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~q~---~~~~vRir~p~G~lt~~ql~~la~iA~~yg~g~i~   84 (928)
                      +|+++.++|.+|.+      .|.+++++...+..++|+|.|.   +.||+|||+|+|+||++||++||++|++||+|++|
T Consensus        76 ~~l~~~~~l~~~~~------~~~~~~~~~~~~~k~~G~y~~~~~~~~fM~RvripgG~lt~~Q~~~la~ia~~yg~g~~~  149 (593)
T PRK09567         76 NPFDAWDRLKAQAA------AGAFPKPADNFRWKYHGLFYVAPAQDSYMCRLRIPNGILTHWQFAGLADLADRHGGGYSH  149 (593)
T ss_pred             CcchhhhHHHHHHh------cCCCCChhhhhhhccceEEEEcccCCeEEEEEEeCCeecCHHHHHHHHHHHHHHCCCeEE
Confidence            55566666666554      2567644443333369999884   48999999999999999999999999999999999


Q ss_pred             ccccCceEEcccCCCChHHHHHHHHHcCCccccccCCcccceEeCCCCccCcccccChHHHHHHHHHHhccCCccccCCC
Q psy3753          85 FTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPR  164 (928)
Q Consensus        85 lTtRq~iql~gi~~e~~~~~~~~L~~~GL~~~~~~gd~vRni~~cp~ag~~~~~~~D~~~la~~l~~~~~~~~~~~~LP~  164 (928)
                      ||||||||||||+.+++++++++|.++||++.++|||++|||++||++|+|+.+++|++++++++.+.+..++++.+||+
T Consensus       150 lTTRq~iQlhgI~~~d~~~i~~~l~~~GL~t~~a~gD~~RNV~~~P~ag~~~~e~~D~~~~a~~l~~~~~~~~~~~~LPr  229 (593)
T PRK09567        150 VTTRANLQLREIPPEHAVPVLEGLVDLGLTARGSGADNIRNVTGSPTAGIDPQELLDTRPYAREWHHHILNDRSLYGLPR  229 (593)
T ss_pred             EeccccEEeccCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCcCCCCCCCCChhhccchHHHHHHHHHHHhCCchhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988888899999


Q ss_pred             ceEEEEEecCCCcccccccceEEEEEEecCCe-----eeEEEEEcccCCCCCcccccccccCChHHHHHHHHHHHHHHHH
Q psy3753         165 KFKISISGSQEDRAAIFVHDIGLRAIKNKLGK-----IGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQ  239 (928)
Q Consensus       165 Kfki~vsgc~~~c~~~~~~Dig~ia~~~~~~~-----~gf~v~vGG~~g~~p~~g~~l~~~v~~~e~~~~~~ai~~~~~~  239 (928)
                      ||||+||||+++|..+.+|||||++....++.     .||+|++||++|+.+ +|..+..+++++++++++++|+++|++
T Consensus       230 Kfkiaisg~~~~~~~~~~nDigf~a~~~~~g~~~~~g~gf~v~vGG~~g~~~-~a~~~~~~v~~e~v~~~~~Ai~~~f~d  308 (593)
T PRK09567        230 KFNVAFDGGGRIATLEDTNDIGFQAVRVLEGAGVAPGVYFRLVLGGITGHKD-FARDTGVLLRPEEATAVADAIVRVFIE  308 (593)
T ss_pred             CeEEEEECCCcccccccccceeeEEEEecCCccccccceEEEEEecccCCCc-chhhhhccCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998753443     589999999998764 577888889999999999999999999


Q ss_pred             hcCCCCcCCCchhHHHHhhCHHHHHHHHHHHHhhccCCCCCccHHHHHhhhhcccCCCCcCCCcchhhhHhhhccCcccc
Q psy3753         240 YGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNSIILKEKCKHNKEFE  319 (928)
Q Consensus       240 ~g~r~~r~~~Rl~~~~~r~G~e~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (928)
                      +|+|+||+++||+++|++||.++|+++++++++.....   ++.+            ....              .....
T Consensus       309 ~G~R~~R~~aRlk~li~~~G~e~f~~~ve~~~~~~l~~---~~~~------------~~~~--------------~~~~~  359 (593)
T PRK09567        309 NGDRTNRKKARLKYVLDAWGFDKFLEAVEEKLGRPLTR---VPAE------------AVAP--------------RPAAD  359 (593)
T ss_pred             hCCcccchhhHHHHHHHHHCHHHHHHHHHHHhcccccc---cchh------------hcCC--------------Ccchh
Confidence            99999999999999999999999999999887642210   0000            0000              01123


Q ss_pred             ccccccccceeeCCEEEEEEEeccCCCCCCCcCHHHHHHHHHHHHHhCCCcEEeccCCCEEEccCCcCCHHHHHHHHHHC
Q psy3753         320 NWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTEIKQY  399 (928)
Q Consensus       320 ~w~~~gv~~qk~~g~~~v~v~~~~~~~p~G~l~~~qlr~La~ia~~~g~g~irlT~~q~i~l~gi~~~~~~~~~~~L~~~  399 (928)
                      .|.+.|+++|+++|+|||+|++|.     |+++++||+.||++|++||+|.+|+|+||||+|++|+.++++++.++|.+.
T Consensus       360 ~~~~~Gv~~Qkq~G~~~v~v~vp~-----Grlt~~ql~~LA~iA~~yg~g~irlT~~Qni~l~~V~~~~~~~l~~~L~~~  434 (593)
T PRK09567        360 RFAHVGVHPQKQPGLNWIGVVLPV-----GRLTTDQMRGLAKIAARYGDGEIRLTVWQNLLISGVPDADVAAVEAAIEAL  434 (593)
T ss_pred             ccccceeeccCCCCceEEEEECCC-----CccCHHHHHHHHHHHHHhCCCEEEEeCCCCeEEcCCCHHHHHHHHHHHHHc
Confidence            355679999999999999998855     999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccceeccCCcccccccccchHHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCcccccccEEEEeEee---
Q psy3753         400 GLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGILGLNK---  476 (928)
Q Consensus       400 Gl~~~~~~~~r~v~aC~G~~~C~~a~~dt~~la~~L~~~~~~~~~~~~~k~ki~iSGCpn~C~~~~~aDig~ig~~~---  476 (928)
                      ||.+.+++.+++++||+|+++|+++++||++++.+|.+++...+ .++.++|||||||||+|++|+++||||+|...   
T Consensus       435 Gl~~~~~~~r~~~vAC~G~~~C~~a~~dT~~~a~~l~~~l~~~~-~l~~~ikI~vSGCpn~Ca~~~iaDIGfvG~~~~~~  513 (593)
T PRK09567        435 GLTTEASSIRAGLVACTGNAGCKFAAADTKGHALAIADYCEPRV-ALDQPVNIHLTGCHHSCAQHYIGDIGLIGAKVAVS  513 (593)
T ss_pred             CCCCCCcceeeccEecCCCCCCCccHhhHHHHHHHHHHHHHHhc-CCCCCcEEEEECCCccccccccCCEEEEeeEeccC
Confidence            99987766677899999999999999999999999999886222 34568999999999999999999999999753   


Q ss_pred             --CCCcEEEEEEcCCCCCCCcccccccCCCCcccHHHHHHHHHHHHHHhcc-cccccccccceeehhhhhhh
Q psy3753         477 --NGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRILKVYLRRCY-LMCKIIKNDTIVNDNWKMLY  545 (928)
Q Consensus       477 --~~~~g~~i~vGG~~~~~~~~g~~~~~~v~~~e~~~~i~~l~~~y~e~~~-~~eR~~k~~~i~r~g~~~~~  545 (928)
                        +...+|+|++||+.+..+++|+.+..+++.++++++++++++.|.++++ +.|++  ++.+.|.+...+.
T Consensus       514 ~g~~~~gy~v~lGG~~g~~~~lg~~~~~~vp~eev~~~l~~ll~~y~~~r~~~~E~f--~~f~~R~g~e~l~  583 (593)
T PRK09567        514 EGDTVEGYHIVVGGGFGEDAAIGREVFRDVKAEDAPRLVERLLRAYLAHRQGPDETF--QAFTRRHDPEALR  583 (593)
T ss_pred             CCCccceEEEEECCCCCCCCCcchHhhcCCCHHHHHHHHHHHHHHHHHhcCCCCCcH--HHHHHHcCcHHHH
Confidence              2347999999999988899999998899999999999999999999999 49999  8888887765443

>PLN02431 ferredoxin--nitrite reductase Back     alignment and domain information
>PRK09566 nirA ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>PLN00178 sulfite reductase Back     alignment and domain information
>PRK13504 sulfite reductase subunit beta; Provisional Back     alignment and domain information
>TIGR02042 sir ferredoxin-sulfite reductase Back     alignment and domain information
>COG0155 CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02041 CysI sulfite reductase (NADPH) hemoprotein, beta-component Back     alignment and domain information
>TIGR02435 CobG precorrin-3B synthase Back     alignment and domain information
>KOG0560|consensus Back     alignment and domain information
>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent Back     alignment and domain information
>PLN02309 5'-adenylylsulfate reductase Back     alignment and domain information
>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>TIGR02055 APS_reductase thioredoxin-dependent adenylylsulfate APS reductase Back     alignment and domain information
>COG0175 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>KOG0189|consensus Back     alignment and domain information
>TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>TIGR02066 dsrB sulfite reductase, dissimilatory-type beta subunit Back     alignment and domain information
>COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>TIGR02066 dsrB sulfite reductase, dissimilatory-type beta subunit Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit Back     alignment and domain information
>PRK09567 nirA ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>TIGR02912 sulfite_red_C sulfite reductase, subunit C Back     alignment and domain information
>COG3749 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK09566 nirA ferredoxin-nitrite reductase; Reviewed Back     alignment and domain information
>PF06073 DUF934: Bacterial protein of unknown function (DUF934); InterPro: IPR008318 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>PLN00178 sulfite reductase Back     alignment and domain information
>TIGR02042 sir ferredoxin-sulfite reductase Back     alignment and domain information
>PLN02431 ferredoxin--nitrite reductase Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>TIGR02435 CobG precorrin-3B synthase Back     alignment and domain information
>TIGR02041 CysI sulfite reductase (NADPH) hemoprotein, beta-component Back     alignment and domain information
>PRK13504 sulfite reductase subunit beta; Provisional Back     alignment and domain information
>TIGR02912 sulfite_red_C sulfite reductase, subunit C Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PF01077 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S domain; InterPro: IPR006067 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>PRK06850 hypothetical protein; Provisional Back     alignment and domain information
>COG0155 CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PF01077 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S domain; InterPro: IPR006067 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively Back     alignment and domain information
>COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only] Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>KOG0560|consensus Back     alignment and domain information
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively Back     alignment and domain information
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG2644|consensus Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>KOG2805|consensus Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain Back     alignment and domain information
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>cd01916 ACS_1 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only] Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>KOG1622|consensus Back     alignment and domain information
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>cd01916 ACS_1 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>PRK00941 acetyl-CoA decarbonylase/synthase complex subunit alpha; Validated Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>KOG0573|consensus Back     alignment and domain information
>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query928
2goy_A275 Crystal Structure Of Assimilatory Adenosine 5'- Pho 2e-43
1zj8_A566 Structure Of Mycobacterium Tuberculosis Nira Protei 3e-39
3b0l_A584 M175g Mutant Of Assimilatory Nitrite Reductase (Nii 7e-37
3vlx_A584 Assimilatory Nitrite Reductase (Nii3) - N226k Mutan 2e-36
3b0m_A584 M175k Mutant Of Assimilatory Nitrite Reductase (Nii 6e-36
3b0j_A584 M175e Mutant Of Assimilatory Nitrite Reductase (Nii 7e-36
3b0n_A584 Q448k Mutant Of Assimilatory Nitrite Reductase (Nii 1e-35
3b0g_A591 Assimilatory Nitrite Reductase (Nii3) From Tobbaco 1e-35
3b0h_A588 Assimilatory Nitrite Reductase (Nii4) From Tobbaco 4e-35
2akj_A608 Structure Of Spinach Nitrite Reductase Length = 608 1e-30
2oq2_A261 Crystal Structure Of Yeast Paps Reductase With Pap, 9e-18
4g39_A570 Mutational Analysis Of Sulfite Reductase Hemoprotei 4e-16
1aop_A497 Sulfite Reductase Structure At 1.6 Angstrom Resolut 5e-16
4g38_A570 Mutational Analysis Of Sulfite Reductase Hemoprotei 6e-16
4htr_A507 N149w Variant Of Sirhp Bound To Sulfite Length = 50 1e-15
2o8v_A252 Paps Reductase In A Covalent Complex With Thioredox 1e-14
1sur_A215 Phospho-Adenylyl-Sulfate Reductase Length = 215 2e-13
>pdb|2GOY|A Chain A, Crystal Structure Of Assimilatory Adenosine 5'- Phosphosulfate Reductase With Bound Aps Length = 275 Back     alignment and structure 
Iteration: 1

 Score =  174 bits (442), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 90/229 (39%), Positives = 131/229 (57%), Gaps = 9/229 (3%)
Query: 697 KTVLDALNNIVTDYKPAVFASSLAAEDMVLTDLILRNNFDINIFTLNTGRLHSETLNMLN 756
           K+  D L      +   ++ S   AED+VL D+  + N ++ +F+L+TGRLH ET   ++
Sbjct: 40  KSPQDILKAAFEHFGDELWISFSGAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFID 99
Query: 757 KIYLTYKYKIKVYYPLNSEVNNYIFKNGINAFYDSVQMRKKCCYIRKVKPLKKALIGNKS 816
           ++   Y   I V  P    +   + + G+ +FY       +CC IRK++PLK+ L G ++
Sbjct: 100 QVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGH--GECCGIRKIEPLKRKLAGVRA 157
Query: 817 WITGQRRTQSI-TRSNLVLKEKD----IIHNGIIKFNPLYNWLEKDIWNYINTYNVPYNT 871
           W TGQRR QS  TRS + + E D         + KFNPL +   +++W YI    +PYN+
Sbjct: 158 WATGQRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNS 217
Query: 872 LYDNGYLSIGCEPCTRPTEKGKDIRSGRWWWENSNIKECGLHVLDGKLI 920
           L++ GY+SIGCEPCTRP    +  R GRWWWE +  KECGLH   G LI
Sbjct: 218 LHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHA--GNLI 264
>pdb|1ZJ8|A Chain A, Structure Of Mycobacterium Tuberculosis Nira Protein Length = 566 Back     alignment and structure
>pdb|3B0L|A Chain A, M175g Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 Back     alignment and structure
>pdb|3VLX|A Chain A, Assimilatory Nitrite Reductase (Nii3) - N226k Mutant - Ligand Free Form From Tobacco Leaf Length = 584 Back     alignment and structure
>pdb|3B0M|A Chain A, M175k Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 Back     alignment and structure
>pdb|3B0J|A Chain A, M175e Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 Back     alignment and structure
>pdb|3B0N|A Chain A, Q448k Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 Back     alignment and structure
>pdb|3B0G|A Chain A, Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 591 Back     alignment and structure
>pdb|3B0H|A Chain A, Assimilatory Nitrite Reductase (Nii4) From Tobbaco Root Length = 588 Back     alignment and structure
>pdb|2AKJ|A Chain A, Structure Of Spinach Nitrite Reductase Length = 608 Back     alignment and structure
>pdb|2OQ2|A Chain A, Crystal Structure Of Yeast Paps Reductase With Pap, A Product Complex Length = 261 Back     alignment and structure
>pdb|4G39|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein Reveals The Mechanism For Coordinated Electron And Proton Transfer Length = 570 Back     alignment and structure
>pdb|1AOP|A Chain A, Sulfite Reductase Structure At 1.6 Angstrom Resolution Length = 497 Back     alignment and structure
>pdb|4G38|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein Reveals The Mechanism For Coordinated Electron And Proton Transfer Length = 570 Back     alignment and structure
>pdb|4HTR|A Chain A, N149w Variant Of Sirhp Bound To Sulfite Length = 507 Back     alignment and structure
>pdb|2O8V|A Chain A, Paps Reductase In A Covalent Complex With Thioredoxin C35a Length = 252 Back     alignment and structure
>pdb|1SUR|A Chain A, Phospho-Adenylyl-Sulfate Reductase Length = 215 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query928
2akj_A608 Ferredoxin--nitrite reductase, chloroplast; X-RAY 0.0
3b0g_A591 NII3, nitrite reductase; siroheme, Fe4S4 binding p 0.0
1zj8_A566 Probable ferredoxin-dependent nitrite reductase N; 0.0
1aop_A497 Sirhp, sulfite reductase hemoprotein; oxidoreducta 1e-171
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 1e-76
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 1e-69
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 1e-68
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 9e-59
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 9e-38
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 3e-33
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 3e-08
3or1_B386 Sulfite reductase beta; dissimilatory sulfite redu 4e-08
3mm5_B366 Sulfite reductase, dissimilatory-type subunit BET; 3e-07
>2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 Length = 608 Back     alignment and structure
 Score =  609 bits (1572), Expect = 0.0
 Identities = 118/530 (22%), Positives = 228/530 (43%), Gaps = 53/530 (10%)

Query: 5   DKYDHQLVKERVIQYRDQVRRRLSNELSEEEFIVLRLQ-NGLYLQR----YAYMLRIAIP 59
                  +++ +          +      ++ I +RL+  GL+ +R      +M+R+ +P
Sbjct: 100 KDPMKLFIEDGISDLATLSMEEVDKSKHNKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLP 159

Query: 60  YGMLSSKQMRMLSYIAKKYDRN-YGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQT 118
            G+ +S+Q R L+ + KKY ++     TTRQN Q   + L + P+I++ L SV + ++Q+
Sbjct: 160 NGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVVLPDVPEIIKGLESVGLTSLQS 219

Query: 119 SGNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPE----FAYLPRKFKISISGSQ 174
             + +RN   + L+G+   EI+DTRP+  ++ Q+ T +         LPRK+   + GS 
Sbjct: 220 GMDNVRNPVGNPLAGIDPHEIVDTRPFTNLISQFVTANSRGNLSITNLPRKWNPCVIGSH 279

Query: 175 EDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPI-IGQIICKFLPWKHILTYIEAI 233
           +      ++D+         GK GF ++VGG            +  ++  + ++   +A+
Sbjct: 280 DLYEHPHINDLAYMPATKN-GKFGFNLLVGGFFSIKRCEEAIPLDAWVSAEDVVPVCKAM 338

Query: 234 LRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEEWKNIKNGPSTLTLEELKRVKKYF 293
           L  +   G R N  K R+  L+  +G+E F+ +V +              + L+R     
Sbjct: 339 LEAFRDLGFRGNRQKCRMMWLIDELGMEAFRGEVEKRM----------PEQVLERASSEE 388

Query: 294 ITPKYKTLPKNSIILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITS 353
           +                     K++E   +      K  G   V L +       G + +
Sbjct: 389 LVQ-------------------KDWERREYLGVHPQKQQGLSFVGLHIP-----VGRLQA 424

Query: 354 EQMNFIANLADHYSFSELRVTHTQNIVLSDVTKDNLFNLWTE-IKQYGLSESNINLLTDI 412
           ++M  +A +AD Y   ELR+T  QNI++ +V    + +L  E + +   S     L+  +
Sbjct: 425 DEMEELARIADVYGSGELRLTVEQNIIIPNVENSKIDSLLNEPLLKERYSPEPPILMKGL 484

Query: 413 ICCPGGDFCSLANTKSLPIAKNIMKYFSKDDQRNIGKISLNISGCINSCGHHHIGNIGIL 472
           + C G  FC  A  ++   A  + +   +        + ++ +GC NSCG   + +IG +
Sbjct: 485 VACTGSQFCGQAIIETKARALKVTEEV-QRLVSVTRPVRMHWTGCPNSCGQVQVADIGFM 543

Query: 473 GL-----NKNGNEYFQILIGGSQGNKLNFGKIIGPSFSADQVPDIINRIL 517
           G      N    E   + +GG  G+  + G I   +     +  ++  IL
Sbjct: 544 GCMTRDENGKPCEGADVFVGGRIGSDSHLGDIYKKAVPCKDLVPVVAEIL 593
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* Length = 591 Back     alignment and structure
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* Length = 566 Back     alignment and structure
>1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Length = 497 Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Length = 252 Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Length = 275 Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Length = 261 Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Length = 215 Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Length = 306 Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Length = 308 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Length = 325 Back     alignment and structure
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* Length = 386 Back     alignment and structure
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* Length = 366 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query928
1zj8_A566 Probable ferredoxin-dependent nitrite reductase N; 100.0
2akj_A608 Ferredoxin--nitrite reductase, chloroplast; X-RAY 100.0
3b0g_A591 NII3, nitrite reductase; siroheme, Fe4S4 binding p 100.0
4g38_A570 SIR-HP, sirhp, sulfite reductase [NADPH] hemoprote 100.0
1aop_A497 Sirhp, sulfite reductase hemoprotein; oxidoreducta 100.0
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 100.0
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 100.0
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 100.0
3or1_A437 Sulfite reductase alpha; dissimilatory sulfite red 100.0
3mm5_A418 Sulfite reductase, dissimilatory-type subunit ALP; 100.0
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 100.0
3or1_B386 Sulfite reductase beta; dissimilatory sulfite redu 100.0
3mm5_B366 Sulfite reductase, dissimilatory-type subunit BET; 100.0
3or1_B386 Sulfite reductase beta; dissimilatory sulfite redu 100.0
3mm5_A418 Sulfite reductase, dissimilatory-type subunit ALP; 100.0
3or1_A437 Sulfite reductase alpha; dissimilatory sulfite red 100.0
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 100.0
3mm5_B366 Sulfite reductase, dissimilatory-type subunit BET; 100.0
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 100.0
3b0g_A591 NII3, nitrite reductase; siroheme, Fe4S4 binding p 100.0
1zj8_A566 Probable ferredoxin-dependent nitrite reductase N; 100.0
2akj_A608 Ferredoxin--nitrite reductase, chloroplast; X-RAY 100.0
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 100.0
1aop_A497 Sirhp, sulfite reductase hemoprotein; oxidoreducta 99.97
4g38_A570 SIR-HP, sirhp, sulfite reductase [NADPH] hemoprote 99.97
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.25
2dpl_A308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 99.18
1wy5_A317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 99.18
1ni5_A 433 Putative cell cycle protein MESJ; structural genom 98.92
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 98.92
1kor_A 400 Argininosuccinate synthetase; ligase, riken struct 98.89
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 98.88
3a2k_A 464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 98.86
2hma_A 376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 98.82
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 98.73
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 98.72
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 98.71
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.61
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 98.59
2der_A 380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 98.59
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 98.53
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 98.48
1k92_A 455 Argininosuccinate synthase, argininosuccinate SY; 98.2
3uow_A556 GMP synthetase; structural genomics consortium, SG 98.16
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 98.15
2nz2_A 413 Argininosuccinate synthase; amino-acid biosynthesi 98.05
3noy_A366 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 98.03
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 97.73
1vl2_A 421 Argininosuccinate synthase; TM1780, structural gen 97.63
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 97.56
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 97.53
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 97.42
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 97.42
3noy_A366 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 97.39
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 97.38
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 97.29
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 96.95
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 96.21
1vbk_A307 Hypothetical protein PH1313; structural genomics, 96.1
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 95.99
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 94.44
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 94.38
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 93.79
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 93.22
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 86.39
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-86  Score=786.86  Aligned_cols=491  Identities=25%  Similarity=0.428  Sum_probs=430.3

Q ss_pred             cCHHHHHHHHHH-HHHHHHHHhcCCCCHHHHhhccccceeeeecC-------------------eeEEEEEcCCCccCHH
Q psy3753           7 YDHQLVKERVIQ-YRDQVRRRLSNELSEEEFIVLRLQNGLYLQRY-------------------AYMLRIAIPYGMLSSK   66 (928)
Q Consensus         7 ~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~q~~-------------------~~~vRir~p~G~lt~~   66 (928)
                      -++++++++|.+ |.+..    .+++++++++.+..++|+|.|++                   .||||||+|+|.+|++
T Consensus        44 ~~~l~~~~~i~~~~~~~~----~~~i~~~d~~~~~k~~G~y~q~~~~~~~~~~~~~~~~~~~~~~~mvRvr~p~G~lt~~  119 (566)
T 1zj8_A           44 GNPLDVRERIENIYAKQG----FDSIDKTDLRGRFRWWGLYTQREQGYDGTWTGDDNIDKLEAKYFMMRVRCDGGALSAA  119 (566)
T ss_dssp             SCGGGHHHHHHHTHHHHC----GGGSCHHHHHTGGGGGTEEEEECTTCCGGGCSGGGHHHHEEEEEEEEEBCGGGEECHH
T ss_pred             cchHHHHHHHHHHHhhcC----CCCCCHHHHhhhheEEEeeeecCCccccccccccccccccCceEEEEecCCCCcCCHH
Confidence            456677777754 55533    57899999985444699999963                   4999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEeccccCceEEcccCCCChHHHHHHHHHcCCccccccCCcccceEeCCCCccCcccccChHHHH
Q psy3753          67 QMRMLSYIAKKYDRNYGHFTTRQNIQFNWIKLKESPDILENLASVEMHAIQTSGNCIRNITSDELSGVSFDEIIDTRPYA  146 (928)
Q Consensus        67 ql~~la~iA~~yg~g~i~lTtRq~iql~gi~~e~~~~~~~~L~~~GL~~~~~~gd~vRni~~cp~ag~~~~~~~D~~~la  146 (928)
                      ||++||++|++||+|++|+|||||||||||+.+++++++++|.++||.+.++||+++|||++||+++.|+.+++|+++++
T Consensus       120 qlr~la~ia~~yg~g~i~~TtRqniql~gi~~~~l~~i~~~L~~~gl~~~~~~G~~~Rnv~~~p~~~~~~~~~~D~~~~~  199 (566)
T 1zj8_A          120 ALRTLGQISTEFARDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGSPLAGESLDEVLDPTWAI  199 (566)
T ss_dssp             HHHHHHHHHHHHSTTEEEECTTSCEEEEEECGGGHHHHHHHHHTTTCBCTTSSSSSEEEEEECTTTTTCTTCSCCTHHHH
T ss_pred             HHHHHHHHHHHHCCCeEEEECCccEEEecCCHHHHHHHHHHHHHcCCCCCCCcCCCCCCeecCcccccCcccccCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCccccCCCceEEEEEecCCCcccccccceEEEEEEecCCeeeEEEEEcccCCCCCcccccccccCChHHH
Q psy3753         147 EILRQWSTFHPEFAYLPRKFKISISGSQEDRAAIFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHI  226 (928)
Q Consensus       147 ~~l~~~~~~~~~~~~LP~Kfki~vsgc~~~c~~~~~~Dig~ia~~~~~~~~gf~v~vGG~~g~~p~~g~~l~~~v~~~e~  226 (928)
                      .+|.+.+..++++.+||+||||+||||++.|  +.++||||+++.+.++..||+|++||++|..|++|+.+..+++++++
T Consensus       200 ~~l~~~~~~~~~~~~LP~KfKiavsgc~~~~--~~~~Dig~i~~~~~~~~~G~~v~vGG~~g~~p~~a~~l~~~v~~e~v  277 (566)
T 1zj8_A          200 EEIVRRYIGKPDFADLPRKYKTAISGLQDVA--HEINDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLGEV  277 (566)
T ss_dssp             HHHHHHHTTSGGGSSCSSCEEEEEESSSCSC--GGGSSEEEEEEEETTTEEEEEEEECCBCSSSCBCCEEEEEEECGGGH
T ss_pred             HHHHHHHcCCcccccCCcceEEEEeccCCcc--cccCcEEEEEEEecCCCceEEEEEcccCCCCCcchhhhccCCCHHHH
Confidence            9999999888888999999999999998854  57999999999775567899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCcCCCchhHHHHhhCHHHHHHHHHHH-HhhccCCCCCccHHHHHhhhhcccCCCCcCCCcch
Q psy3753         227 LTYIEAILRIYNQYGRRDNIYKSRIKILLKSIGIENFQFQVNEE-WKNIKNGPSTLTLEELKRVKKYFITPKYKTLPKNS  305 (928)
Q Consensus       227 ~~~~~ai~~~~~~~g~r~~r~~~Rl~~~~~r~G~e~f~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  305 (928)
                      ++++++++++|+++|+|+||+++||+++++++|+++|++.++++ ++.....                 .+......   
T Consensus       278 ~~~~~ai~~~~~~~G~R~~r~~aRl~~li~~~G~e~f~~~v~~~~~~~~~~~-----------------~~~~~~~~---  337 (566)
T 1zj8_A          278 PEVWAAVTSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLID-----------------GPAPEPVK---  337 (566)
T ss_dssp             HHHHHHHHHHHHHHSCCSSGGGCSHHHHHHHHCHHHHHHHHHHHTTSSCCEE-----------------CCCCCCCS---
T ss_pred             HHHHHHHHHHHHHhCcccccchHHHHHHHHHHCHHHHHHHHHHHhccccccc-----------------CCCccCcc---
Confidence            99999999999999999999999999999999999999999843 3221100                 00000000   


Q ss_pred             hhhHhhhccCccccccccccccceeeCCEEEEEEEeccCCCCCCCcCHHHHHHHHHHHHHhCCCcEEeccCCCEEEccCC
Q psy3753         306 IILKEKCKHNKEFENWVHQNTKKHKINGYIIVILSLKRINMAPGDITSEQMNFIANLADHYSFSELRVTHTQNIVLSDVT  385 (928)
Q Consensus       306 ~~~~~~~~~~~~~~~w~~~gv~~qk~~g~~~v~v~~~~~~~p~G~l~~~qlr~La~ia~~~g~g~irlT~~q~i~l~gi~  385 (928)
                                   ....+.|+++|+ +|.|+|++.++.     |++|+++|+.||++|++||+|.+|+|++|||+|++++
T Consensus       338 -------------~~~~~~G~~~qk-~G~~~v~v~~p~-----G~lt~~~l~~Ladiae~yg~g~irlT~~qniil~~v~  398 (566)
T 1zj8_A          338 -------------HPIDHVGVQRLK-NGLNAVGVAPIA-----GRVSGTILTAVADLMARAGSDRIRFTPYQKLVILDIP  398 (566)
T ss_dssp             -------------SCCCCCEEEECT-TSSEEEEEBCBT-----TEEEHHHHHHHHHHHHHHTCCCEEECTTSCEEEEEEC
T ss_pred             -------------ccCCCcceeecc-CCcEEEEEeCCC-----CccCHHHHHHHHHHHHHhCCCEEEECCCCcEEEecCC
Confidence                         001245788888 689999988754     9999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHCCCCCCCcccccceeccCCcccccccccchHHHHHHHHHHhc--c-c-CcCCCCCeEEEEecCCCCC
Q psy3753         386 KDNLFNLWTEIKQYGLSESNINLLTDIICCPGGDFCSLANTKSLPIAKNIMKYFS--K-D-DQRNIGKISLNISGCINSC  461 (928)
Q Consensus       386 ~~~~~~~~~~L~~~Gl~~~~~~~~r~v~aC~G~~~C~~a~~dt~~la~~L~~~~~--~-~-~~~~~~k~ki~iSGCpn~C  461 (928)
                      ++++++++++|.+.|+.+++++.+|+++||+|.++|+++++||+.++..|.+.+.  . . .+..+.+|||+||||||+|
T Consensus       399 ~~~l~~i~~~L~~~Gl~~~~s~~~r~~~aC~G~~~C~~a~~dt~~~a~~l~~~l~~~l~~~~~~~~~~~ki~vSGCpN~C  478 (566)
T 1zj8_A          399 DALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINSQLDVPITVNINGCPNSC  478 (566)
T ss_dssp             HHHHHHHHHHHHHTTCBSSCCHHHHHEEECCBTTTCTTCSSBCHHHHHHHHHHHHHHTHHHHTTCCSCCCEEEESSTTCT
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCcccccccCCCcccCccchhhHHHHHHHHHHHHHHHhhccccccCCCceEEEecCCccc
Confidence            9999999999999999998887789999999999999999999888877777665  1 1 0123348999999999999


Q ss_pred             cccccccEEEEeEeeCC-----CcEEEEEEcCCCCCCCccccccc-CCCCcccHHHHHHHHHHHHHHhcccccccccccc
Q psy3753         462 GHHHIGNIGILGLNKNG-----NEYFQILIGGSQGNKLNFGKIIG-PSFSADQVPDIINRILKVYLRRCYLMCKIIKNDT  535 (928)
Q Consensus       462 ~~~~~aDig~ig~~~~~-----~~g~~i~vGG~~~~~~~~g~~~~-~~v~~~e~~~~i~~l~~~y~e~~~~~eR~~k~~~  535 (928)
                      ++++++||||+|++++.     ..+|+|++||+.|.++++|+.+. ..++++|+++++++++++|++++++.||+  ++.
T Consensus       479 a~~~~aDIGivG~~~~~~~g~~~~gy~i~lGG~~g~~~~~g~~l~~~~v~~eei~~~l~~l~~~y~~~~~~~Erf--~~~  556 (566)
T 1zj8_A          479 ARIQIADIGFKGQMIDDGHGGSVEGFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHRSEGERF--AQW  556 (566)
T ss_dssp             TCGGGSSEEEEEEEEESSSSCEEEEEEEEESCBCSTTCBCCEECTTCCEETTTHHHHHHHHHHHHHHSCCTTCCH--HHH
T ss_pred             hhhhhcceeEEEEeccCCCCccceeEEEEeCCCCCCCCccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCH--HHH
Confidence            99999999999987542     26899999999988899999886 46799999999999999999999999999  999


Q ss_pred             eeehhhhhh
Q psy3753         536 IVNDNWKML  544 (928)
Q Consensus       536 i~r~g~~~~  544 (928)
                      ++|.||..|
T Consensus       557 i~R~G~~~~  565 (566)
T 1zj8_A          557 VIRAEEDDL  565 (566)
T ss_dssp             HHHSCGGGG
T ss_pred             HHhcCHHhc
Confidence            999998765
>2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 Back     alignment and structure
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* Back     alignment and structure
>4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Back     alignment and structure
>1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A* Back     alignment and structure
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A* Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Back     alignment and structure
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* Back     alignment and structure
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* Back     alignment and structure
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* Back     alignment and structure
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A* Back     alignment and structure
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A* Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* Back     alignment and structure
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* Back     alignment and structure
>2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Back     alignment and structure
>4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 928
d1zj8a4165 d.134.1.1 (A:162-326) Sulfite reductase NirA {Myco 4e-48
d1zj8a4165 d.134.1.1 (A:162-326) Sulfite reductase NirA {Myco 3e-13
d2akja4171 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductas 1e-44
d2akja4171 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductas 2e-15
d1sura_215 c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) redu 1e-39
d1aopa3197 d.134.1.1 (A:149-345) Sulfite reductase hemoprotei 1e-31
d1aopa3197 d.134.1.1 (A:149-345) Sulfite reductase hemoprotei 3e-05
d2akja3126 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductas 2e-25
d2akja3126 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductas 4e-20
d2akja2153 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase 2e-22
d2akja2153 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase 2e-13
d1aopa4145 d.134.1.1 (A:426-570) Sulfite reductase hemoprotei 8e-22
d1aopa4145 d.134.1.1 (A:426-570) Sulfite reductase hemoprotei 1e-08
d1zj8a2152 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycob 3e-20
d1zj8a2152 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycob 2e-15
d1zuna1211 c.26.2.2 (A:1-211) Sulfate adenylyltransferase sub 7e-20
d1aopa165 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 3e-19
d1aopa165 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 1e-12
d3c7bb2119 d.58.36.2 (B:4-122) Dissimilatory sulfite reductas 3e-19
d2akja185 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductas 7e-19
d2akja185 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductas 5e-16
d1zj8a3149 d.134.1.1 (A:407-555) Sulfite reductase NirA {Myco 1e-18
d1zj8a3149 d.134.1.1 (A:407-555) Sulfite reductase NirA {Myco 1e-14
d1zj8a180 d.58.36.1 (A:327-406) Sulfite reductase NirA {Myco 4e-18
d1zj8a180 d.58.36.1 (A:327-406) Sulfite reductase NirA {Myco 2e-14
d2v4jb3177 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulf 3e-16
d2v4jb3177 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulf 6e-04
d3c7bb3179 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulf 3e-16
d3c7bb3179 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulf 1e-06
d3c7ba3185 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulf 9e-14
d3c7ba3185 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulf 1e-05
d2v4jb2134 d.58.36.2 (B:2-135) Dissimilatory sulfite reductas 3e-13
d2v4jb2134 d.58.36.2 (B:2-135) Dissimilatory sulfite reductas 2e-06
d1aopa280 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 2e-10
d1aopa280 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 2e-05
d2v4ja3189 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulf 3e-08
d2v4ja3189 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulf 3e-04
>d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 165 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Nitrite and sulphite reductase 4Fe-4S domain-like
superfamily: Nitrite and sulphite reductase 4Fe-4S domain-like
family: Nitrite and sulphite reductase 4Fe-4S domain-like
domain: Sulfite reductase NirA
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  166 bits (421), Expect = 4e-48
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 4/163 (2%)

Query: 120 GNCIRNITSDELSGVSFDEIIDTRPYAEILRQWSTFHPEFAYLPRKFKISISGSQEDRAA 179
           G+C R +    L+G S DE++D     E + +     P+FA LPRK+K +ISG      A
Sbjct: 1   GDCPRVVLGSPLAGESLDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISGL--QDVA 58

Query: 180 IFVHDIGLRAIKNKLGKIGFCVIVGGGMGRTPIIGQIICKFLPWKHILTYIEAILRIYNQ 239
             ++D+    + +     G  + VGGG+   P++ Q +  ++P   +     A+  ++  
Sbjct: 59  HEINDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVFRD 118

Query: 240 YGRRDNIYKSRIKILLKSIGIENFQFQVNEEW--KNIKNGPST 280
           YG R    K+R+K L+K  GI  F+  +  E+  + + +GP+ 
Sbjct: 119 YGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAP 161
>d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 165 Back     information, alignment and structure
>d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 171 Back     information, alignment and structure
>d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 171 Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Length = 215 Back     information, alignment and structure
>d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 197 Back     information, alignment and structure
>d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 197 Back     information, alignment and structure
>d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 126 Back     information, alignment and structure
>d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 126 Back     information, alignment and structure
>d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 153 Back     information, alignment and structure
>d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 153 Back     information, alignment and structure
>d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 145 Back     information, alignment and structure
>d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 145 Back     information, alignment and structure
>d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 152 Back     information, alignment and structure
>d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 152 Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Length = 211 Back     information, alignment and structure
>d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 65 Back     information, alignment and structure
>d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 65 Back     information, alignment and structure
>d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} Length = 119 Back     information, alignment and structure
>d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 85 Back     information, alignment and structure
>d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 85 Back     information, alignment and structure
>d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 149 Back     information, alignment and structure
>d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 149 Back     information, alignment and structure
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 80 Back     information, alignment and structure
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 80 Back     information, alignment and structure
>d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 177 Back     information, alignment and structure
>d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 177 Back     information, alignment and structure
>d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} Length = 179 Back     information, alignment and structure
>d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} Length = 179 Back     information, alignment and structure
>d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} Length = 185 Back     information, alignment and structure
>d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} Length = 185 Back     information, alignment and structure
>d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 134 Back     information, alignment and structure
>d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 134 Back     information, alignment and structure
>d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 80 Back     information, alignment and structure
>d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 80 Back     information, alignment and structure
>d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} Length = 189 Back     information, alignment and structure
>d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} Length = 189 Back     information, alignment and structure