Psyllid ID: psy3774
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 963 | 2.2.26 [Sep-21-2011] | |||||||
| A4G7P5 | 503 | Probable cytosol aminopep | yes | N/A | 0.518 | 0.992 | 0.568 | 1e-176 | |
| A6T0V4 | 504 | Probable cytosol aminopep | yes | N/A | 0.518 | 0.990 | 0.562 | 1e-174 | |
| Q46XT9 | 510 | Probable cytosol aminopep | yes | N/A | 0.514 | 0.970 | 0.492 | 1e-150 | |
| B2JET5 | 503 | Probable cytosol aminopep | yes | N/A | 0.510 | 0.978 | 0.510 | 1e-150 | |
| B3R663 | 516 | Probable cytosol aminopep | yes | N/A | 0.514 | 0.959 | 0.486 | 1e-148 | |
| Q0K7F5 | 512 | Probable cytosol aminopep | yes | N/A | 0.514 | 0.966 | 0.482 | 1e-147 | |
| Q1LJJ6 | 510 | Probable cytosol aminopep | yes | N/A | 0.510 | 0.964 | 0.489 | 1e-146 | |
| B2T146 | 508 | Probable cytosol aminopep | yes | N/A | 0.516 | 0.978 | 0.496 | 1e-145 | |
| A9AHG9 | 503 | Probable cytosol aminopep | yes | N/A | 0.514 | 0.984 | 0.488 | 1e-144 | |
| Q143Y9 | 508 | Probable cytosol aminopep | yes | N/A | 0.516 | 0.978 | 0.496 | 1e-144 |
| >sp|A4G7P5|AMPA_HERAR Probable cytosol aminopeptidase OS=Herminiimonas arsenicoxydans GN=pepA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust.
Identities = 284/500 (56%), Positives = 382/500 (76%), Gaps = 1/500 (0%)
Query: 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDIDKYGEITNILKSGDLNEKLGS 517
MDF IK + + ++I S+KT C+ V +F+ KLS+ + +D+ G I+ LKSGD++ K GS
Sbjct: 1 MDFSIKPLDAKSTIASIKTGCIAVAVFEDKKLSAAAQALDQKGGISAALKSGDISGKAGS 60
Query: 518 TLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKI 577
TLLLR + + A+R+LLV LG K+ + E +F +Q++ F ++GA+ ++ LP + +
Sbjct: 61 TLLLRGVSGVAAERVLLVGLG-KEDPVSEKDFSSAVQAVARAFTSLGATEAVIALPLDAV 119
Query: 578 EKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAIIYGC 637
+ + I TI+ D YR D+ KSKK+P +KKI+FA+ + K+AI
Sbjct: 120 AARDAAWSIRCTILNTRDASYRFDSLKSKKEPAPAGVKKIVFAVSAASTAIAKDAIAQAV 179
Query: 638 AISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVT 697
A + GI+LTK+LGNL AN+CTPTYL N +KK++ ++K+ +E+++R+Q+Q LKMGS LSVT
Sbjct: 180 AQANGIDLTKDLGNLPANVCTPTYLANTAKKMAKEFKLQVEVLDRKQLQALKMGSFLSVT 239
Query: 698 HGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASIL 757
+GS EPPK I++K+M GK K+AP+VLVGKG+TFD+GGIS+KP +MDEMKYDM GAAS+L
Sbjct: 240 NGSVEPPKFIVLKHMGGKAKDAPVVLVGKGITFDSGGISLKPGAAMDEMKYDMGGAASVL 299
Query: 758 GTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCD 817
GT+ AI+E+ L+LN+I VI ENM SG++TKPGDIV SMSG+TIEVL+TDAEGRL+LCD
Sbjct: 300 GTMRAIAELKLKLNVIVVIPTCENMPSGSATKPGDIVTSMSGQTIEVLNTDAEGRLVLCD 359
Query: 818 ALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSGDTA 877
ALTYVERFKP+ VID+ATLTGAC+ ALGHHNSGLF+R+D+ H L +LL AGK SGDTA
Sbjct: 360 ALTYVERFKPAAVIDVATLTGACITALGHHNSGLFTRSDDAHDALANELLAAGKASGDTA 419
Query: 878 WNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGD 937
W MPIED YQ+QLKSNFAD++NIG + ++TAACFLE +TKKY WAHLDIAG AWKSG
Sbjct: 420 WRMPIEDSYQEQLKSNFADMANIGGPAGGAVTAACFLERYTKKYTWAHLDIAGTAWKSGA 479
Query: 938 KKGATGRPVTLLTYYLMLKS 957
KG+TGRPV LLT +L+ ++
Sbjct: 480 AKGSTGRPVPLLTSFLIQRA 499
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Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides. Herminiimonas arsenicoxydans (taxid: 204773) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 0 |
| >sp|A6T0V4|AMPA_JANMA Probable cytosol aminopeptidase OS=Janthinobacterium sp. (strain Marseille) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q46XT9|AMPA_CUPPJ Probable cytosol aminopeptidase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=pepA PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|B2JET5|AMPA_BURP8 Probable cytosol aminopeptidase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|B3R663|AMPA_CUPTR Probable cytosol aminopeptidase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q0K7F5|AMPA_CUPNH Probable cytosol aminopeptidase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q1LJJ6|AMPA_RALME Probable cytosol aminopeptidase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|B2T146|AMPA_BURPP Probable cytosol aminopeptidase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=pepA PE=3 SV=1 | Back alignment and function description |
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| >sp|A9AHG9|AMPA_BURM1 Probable cytosol aminopeptidase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=pepA PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q143Y9|AMPA_BURXL Probable cytosol aminopeptidase OS=Burkholderia xenovorans (strain LB400) GN=pepA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 963 | ||||||
| 399021231 | 510 | leucyl aminopeptidase [Herbaspirillum sp | 0.515 | 0.972 | 0.582 | 1e-174 | |
| 134095578 | 503 | leucyl aminopeptidase [Herminiimonas ars | 0.518 | 0.992 | 0.568 | 1e-174 | |
| 152980570 | 504 | leucyl aminopeptidase [Janthinobacterium | 0.518 | 0.990 | 0.562 | 1e-172 | |
| 329907052 | 503 | Cytosol aminopeptidase PepA [Oxalobacter | 0.514 | 0.984 | 0.570 | 1e-170 | |
| 398833869 | 505 | leucyl aminopeptidase [Herbaspirillum sp | 0.515 | 0.982 | 0.557 | 1e-170 | |
| 395761400 | 497 | multifunctional aminopeptidase A [Janthi | 0.512 | 0.993 | 0.563 | 1e-168 | |
| 340788702 | 504 | cytosol aminopeptidase PepA [Collimonas | 0.516 | 0.986 | 0.576 | 1e-167 | |
| 409406839 | 506 | leucyl aminopeptidase [Herbaspirillum sp | 0.515 | 0.980 | 0.563 | 1e-165 | |
| 300312409 | 506 | leucyl aminopeptidase [Herbaspirillum se | 0.515 | 0.980 | 0.565 | 1e-164 | |
| 445495651 | 497 | leucyl aminopeptidase PepA [Janthinobact | 0.512 | 0.993 | 0.559 | 1e-160 |
| >gi|399021231|ref|ZP_10723348.1| leucyl aminopeptidase [Herbaspirillum sp. CF444] gi|398092903|gb|EJL83304.1| leucyl aminopeptidase [Herbaspirillum sp. CF444] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1599), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/500 (58%), Positives = 373/500 (74%), Gaps = 4/500 (0%)
Query: 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDIDKYGEITNILKSGDLNEKLGS 517
MDF IK + + TS+ ++KT LVVG+F+ KL+ + +DK G I N LKSGD+ K GS
Sbjct: 1 MDFSIKTLDAKTSVTAVKTGTLVVGVFENRKLTPAAQALDKMGAIANALKSGDITGKPGS 60
Query: 518 TLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKI 577
TLLLR + + A+R+LLV LG ++I E +F Q+ + +GA++ L++LP +KI
Sbjct: 61 TLLLRGVTGVAAERVLLVGLG-ADEEIAEKSFSSATQAAVRALTTVGANDALVVLPLDKI 119
Query: 578 ---EKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAII 634
E +++ I ++ DN YRSDA KSKK P +KKI + K +
Sbjct: 120 KGREGRDIAWAIRALVLAARDNNYRSDAMKSKKDPAPTGVKKIAIGVSAAAAAAAKTGLA 179
Query: 635 YGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLL 694
A++ G+EL+K+L NL N+CTPTYL +KKL+ +YK+ +E+++R+Q++ LKMGS L
Sbjct: 180 EAVALANGMELSKDLANLPGNVCTPTYLAATAKKLAKEYKLGVEVLDRKQLEALKMGSFL 239
Query: 695 SVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAA 754
SVT+GS +PPK I++K+M GK KEAPIVLVGKG+TFDTGGIS+KP +MDEMKYDMCGAA
Sbjct: 240 SVTNGSDQPPKFIVLKHMGGKTKEAPIVLVGKGITFDTGGISLKPGAAMDEMKYDMCGAA 299
Query: 755 SILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLI 814
S+LGT AI+E+ L+LN+IGVI ENM SG +TKPGDIV SMSG+TIEVL+TDAEGRLI
Sbjct: 300 SVLGTFRAIAELQLKLNVIGVIPTCENMPSGRATKPGDIVTSMSGQTIEVLNTDAEGRLI 359
Query: 815 LCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSG 874
LCDALTYVERFKP+ V+DIATLTGACVVALGHHNSGLF+R D+ H +L +LL AGK SG
Sbjct: 360 LCDALTYVERFKPAAVVDIATLTGACVVALGHHNSGLFTREDDAHDQLANELLAAGKTSG 419
Query: 875 DTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWK 934
DTAW MP++D YQ+QLKSNFADI+NIG A S+TAACFLE FTKKY WAHLDIAG AW+
Sbjct: 420 DTAWRMPVQDVYQEQLKSNFADIANIGGQPAGSVTAACFLERFTKKYTWAHLDIAGTAWR 479
Query: 935 SGDKKGATGRPVTLLTYYLM 954
G KGA+GRPV LLT +L+
Sbjct: 480 GGATKGASGRPVPLLTTFLL 499
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Source: Herbaspirillum sp. CF444 Species: Herbaspirillum sp. CF444 Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|134095578|ref|YP_001100653.1| leucyl aminopeptidase [Herminiimonas arsenicoxydans] gi|166215784|sp|A4G7P5.1|AMPA_HERAR RecName: Full=Probable cytosol aminopeptidase; AltName: Full=Leucine aminopeptidase; Short=LAP; AltName: Full=Leucyl aminopeptidase gi|133739481|emb|CAL62532.1| Cytosol aminopeptidase (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) [Herminiimonas arsenicoxydans] | Back alignment and taxonomy information |
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| >gi|152980570|ref|YP_001354151.1| leucyl aminopeptidase [Janthinobacterium sp. Marseille] gi|166215785|sp|A6T0V4.1|AMPA_JANMA RecName: Full=Probable cytosol aminopeptidase; AltName: Full=Leucine aminopeptidase; Short=LAP; AltName: Full=Leucyl aminopeptidase gi|151280647|gb|ABR89057.1| cytosol aminopeptidase [Janthinobacterium sp. Marseille] | Back alignment and taxonomy information |
|---|
| >gi|329907052|ref|ZP_08274544.1| Cytosol aminopeptidase PepA [Oxalobacteraceae bacterium IMCC9480] gi|327547109|gb|EGF31983.1| Cytosol aminopeptidase PepA [Oxalobacteraceae bacterium IMCC9480] | Back alignment and taxonomy information |
|---|
| >gi|398833869|ref|ZP_10591987.1| leucyl aminopeptidase [Herbaspirillum sp. YR522] gi|398220701|gb|EJN07141.1| leucyl aminopeptidase [Herbaspirillum sp. YR522] | Back alignment and taxonomy information |
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| >gi|395761400|ref|ZP_10442069.1| multifunctional aminopeptidase A [Janthinobacterium lividum PAMC 25724] | Back alignment and taxonomy information |
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| >gi|340788702|ref|YP_004754167.1| cytosol aminopeptidase PepA [Collimonas fungivorans Ter331] gi|340553969|gb|AEK63344.1| Cytosol aminopeptidase PepA [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
| >gi|409406839|ref|ZP_11255301.1| leucyl aminopeptidase [Herbaspirillum sp. GW103] gi|386435388|gb|EIJ48213.1| leucyl aminopeptidase [Herbaspirillum sp. GW103] | Back alignment and taxonomy information |
|---|
| >gi|300312409|ref|YP_003776501.1| leucyl aminopeptidase [Herbaspirillum seropedicae SmR1] gi|300075194|gb|ADJ64593.1| leucyl aminopeptidase protein [Herbaspirillum seropedicae SmR1] | Back alignment and taxonomy information |
|---|
| >gi|445495651|ref|ZP_21462695.1| leucyl aminopeptidase PepA [Janthinobacterium sp. HH01] gi|444791812|gb|ELX13359.1| leucyl aminopeptidase PepA [Janthinobacterium sp. HH01] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 963 | ||||||
| UNIPROTKB|Q887M0 | 496 | pepA "Probable cytosol aminope | 0.505 | 0.981 | 0.470 | 6.8e-111 | |
| TIGR_CMR|CPS_0740 | 501 | CPS_0740 "cytosol aminopeptida | 0.509 | 0.980 | 0.444 | 2.1e-107 | |
| UNIPROTKB|Q4KHT6 | 496 | pepA "Probable cytosol aminope | 0.505 | 0.981 | 0.446 | 3.5e-107 | |
| TIGR_CMR|VC_2501 | 503 | VC_2501 "aminopeptidase A/I" [ | 0.514 | 0.984 | 0.430 | 2.8e-105 | |
| UNIPROTKB|P68767 | 503 | pepA [Escherichia coli K-12 (t | 0.506 | 0.970 | 0.427 | 9.5e-105 | |
| TIGR_CMR|SO_1368 | 502 | SO_1368 "cytosol aminopeptidas | 0.506 | 0.972 | 0.422 | 7.7e-103 | |
| TIGR_CMR|GSU_0332 | 496 | GSU_0332 "aminopeptidase A/I" | 0.332 | 0.645 | 0.448 | 5.9e-78 | |
| TIGR_CMR|NSE_0475 | 506 | NSE_0475 "cytosol aminopeptida | 0.320 | 0.610 | 0.464 | 4.1e-70 | |
| TIGR_CMR|ECH_0369 | 500 | ECH_0369 "cytosol aminopeptida | 0.332 | 0.64 | 0.442 | 3.3e-69 | |
| UNIPROTKB|Q2GLA3 | 510 | pepA "Probable cytosol aminope | 0.319 | 0.603 | 0.437 | 2.3e-66 |
| UNIPROTKB|Q887M0 pepA "Probable cytosol aminopeptidase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 234/497 (47%), Positives = 312/497 (62%)
Query: 462 IKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVK--DIDKYGEITNILKSGDLNEKLGSTL 519
++L+ + S +LKT LVV I + L + DI G I+ +L+ GDL K G TL
Sbjct: 1 MELVVKSVSPETLKTATLVVTINESRVLIGAAQLVDIKSGGAISAVLERGDLAGKSGQTL 60
Query: 520 LLRNIQKINAKRILLVNLGDXXXXXXXXXXXXXXQSIMNVFCNIGASNLLLMLPFNKIEK 579
LL N+Q I A+R+LLV +G S+++ +G S+ ++ L ++
Sbjct: 61 LLTNLQNIKAERVLLVGIGKDGELSDRQLKKIAG-SVLSSLKGLGGSDAVIALDDLSVKN 119
Query: 580 YNLSCLXXXXXXXXSDNLYRSDAQXXXXXXXXXXXXXXXFALDEKNYIDGKNAIIYGCAI 639
+ +D Y D + D+ + D + A + AI
Sbjct: 120 RDTYGKARLFVEALADGEYVFD-RFKTQKAEVRPLKKITLLTDKVSVADVERAANHAQAI 178
Query: 640 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYK-MDIEIINREQMQRLKMGSLLSVTH 698
+ G+ LT++LGNL NIC PTYL +K L +K + +EI + +++ L MGS L+V
Sbjct: 179 ATGMALTRDLGNLPPNICHPTYLGEEAKALGKAHKNLKVEIHDEKKLAELGMGSFLAVAQ 238
Query: 699 GSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILG 758
GS++PP+LI++ Y GK + P VLVGKG+TFDTGGISIKP+ MDEMK+DMCGAAS+ G
Sbjct: 239 GSAQPPRLIVMNYQGGKKGDKPFVLVGKGITFDTGGISIKPAAGMDEMKFDMCGAASVFG 298
Query: 759 TLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDA 818
TL A+ E+ L +N++ ++ +ENM SG +T+PGDIV +MSG+T+E+L+TDAEGRL+LCDA
Sbjct: 299 TLRAVLELKLPINVVCILACAENMPSGTATRPGDIVTTMSGQTVEILNTDAEGRLVLCDA 358
Query: 819 LTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSGDTAW 878
LTY ERFKP VIDIATLTGACVVALG H SGL ND L+ LL AGK++ D AW
Sbjct: 359 LTYAERFKPQAVIDIATLTGACVVALGGHTSGLLGNNDA----LINQLLDAGKLADDRAW 414
Query: 879 NMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDK 938
+P+ D YQ+QL S FADI+NIG +ITAACFL FTK Y WAHLDIAG AW SG K
Sbjct: 415 QLPLFDEYQEQLDSPFADIANIGGPKGGTITAACFLSRFTKAYEWAHLDIAGTAWLSGGK 474
Query: 939 -KGATGRPVTLLTYYLM 954
KGATGRPV LLT YL+
Sbjct: 475 DKGATGRPVPLLTQYLL 491
|
|
| TIGR_CMR|CPS_0740 CPS_0740 "cytosol aminopeptidase A" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4KHT6 pepA "Probable cytosol aminopeptidase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_2501 VC_2501 "aminopeptidase A/I" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P68767 pepA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SO_1368 SO_1368 "cytosol aminopeptidase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_0332 GSU_0332 "aminopeptidase A/I" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|NSE_0475 NSE_0475 "cytosol aminopeptidase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|ECH_0369 ECH_0369 "cytosol aminopeptidase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2GLA3 pepA "Probable cytosol aminopeptidase" [Anaplasma phagocytophilum HZ (taxid:212042)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A6T0V4 | AMPA_JANMA | 3, ., 4, ., 1, 1, ., 1, 0 | 0.562 | 0.5181 | 0.9900 | yes | N/A |
| A4G7P5 | AMPA_HERAR | 3, ., 4, ., 1, 1, ., 1, 0 | 0.568 | 0.5181 | 0.9920 | yes | N/A |
| B2JET5 | AMPA_BURP8 | 3, ., 4, ., 1, 1, ., 1, 0 | 0.5109 | 0.5109 | 0.9781 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.4.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 963 | |||
| PRK00913 | 483 | PRK00913, PRK00913, multifunctional aminopeptidase | 0.0 | |
| PRK00913 | 483 | PRK00913, PRK00913, multifunctional aminopeptidase | 0.0 | |
| cd00433 | 468 | cd00433, Peptidase_M17, Cytosol aminopeptidase fam | 0.0 | |
| COG0260 | 485 | COG0260, PepB, Leucyl aminopeptidase [Amino acid t | 1e-174 | |
| cd00433 | 468 | cd00433, Peptidase_M17, Cytosol aminopeptidase fam | 1e-171 | |
| COG0260 | 485 | COG0260, PepB, Leucyl aminopeptidase [Amino acid t | 1e-165 | |
| pfam00883 | 311 | pfam00883, Peptidase_M17, Cytosol aminopeptidase f | 1e-130 | |
| pfam00883 | 311 | pfam00883, Peptidase_M17, Cytosol aminopeptidase f | 1e-126 | |
| PTZ00412 | 569 | PTZ00412, PTZ00412, leucyl aminopeptidase; Provisi | 4e-73 | |
| PTZ00412 | 569 | PTZ00412, PTZ00412, leucyl aminopeptidase; Provisi | 9e-71 | |
| PRK05015 | 424 | PRK05015, PRK05015, aminopeptidase B; Provisional | 1e-60 | |
| PRK05015 | 424 | PRK05015, PRK05015, aminopeptidase B; Provisional | 1e-59 | |
| pfam02789 | 126 | pfam02789, Peptidase_M17_N, Cytosol aminopeptidase | 8e-13 | |
| pfam02789 | 126 | pfam02789, Peptidase_M17_N, Cytosol aminopeptidase | 2e-08 |
| >gnl|CDD|234863 PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional | Back alignment and domain information |
|---|
Score = 600 bits (1550), Expect = 0.0
Identities = 234/504 (46%), Positives = 327/504 (64%), Gaps = 29/504 (5%)
Query: 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDIDK--YGEITNILKSGDLNEKL 515
M+F +K + S K+DCLVVG+ ++ LS + +DK G ++ +LK GD K
Sbjct: 1 MEFSVK----SGSPEKQKSDCLVVGVPER--LSPAAEQLDKASDGYLSALLKRGDFKGKA 54
Query: 516 GSTLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFN 575
G TLLL + + A+R+LLV LG K++++ E K ++ L
Sbjct: 55 GETLLLHAVPGVLAERVLLVGLG-KEEELDEEQLRKAAGKAARALKKTKVKEAVIFLTEL 113
Query: 576 KIEKYNLSCLIIRTIII-ISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAII 634
R LYR D KSKK+P + ++K++F + + + AI
Sbjct: 114 HTYW------KARAAAEGALLGLYRFDKYKSKKEP-RRPLEKLVFLVP-TRLTEAEKAIA 165
Query: 635 YGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLL 694
+G AI++G+ L ++L N NI TP YL +K+L+ +Y +++E+++ ++M++L MG+LL
Sbjct: 166 HGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALL 225
Query: 695 SVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAA 754
+V GS+ PP+LI+++Y GK PI LVGKG+TFD+GGIS+KP+ MDEMKYDM GAA
Sbjct: 226 AVGQGSANPPRLIVLEYKGGK---KPIALVGKGLTFDSGGISLKPAAGMDEMKYDMGGAA 282
Query: 755 SILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLI 814
++LGT+ A++E+ L +N++GV+ A ENM SGN+ +PGD++ SMSGKTIEVL+TDAEGRL+
Sbjct: 283 AVLGTMRALAELKLPVNVVGVVAACENMPSGNAYRPGDVLTSMSGKTIEVLNTDAEGRLV 342
Query: 815 LCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSG 874
L DALTY ERFKP +ID+ATLTGACVVALGHH +GL S NDE L +LL+AG+ SG
Sbjct: 343 LADALTYAERFKPDAIIDVATLTGACVVALGHHTAGLMSNNDE----LADELLKAGEESG 398
Query: 875 DTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWK 934
+ AW +P+ D YQ+QLKS FAD++NIG +ITAACFL F +KY WAHLDIAG AW
Sbjct: 399 ERAWRLPLGDEYQEQLKSPFADMANIGGRPGGAITAACFLSRFVEKYPWAHLDIAGTAWN 458
Query: 935 SGDK----KGATGRPVTLLTYYLM 954
S KGATGR V LL +L
Sbjct: 459 SKAWGYNPKGATGRGVRLLVQFLE 482
|
Length = 483 |
| >gnl|CDD|234863 PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238247 cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
|---|
| >gnl|CDD|223338 COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|238247 cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
|---|
| >gnl|CDD|223338 COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216171 pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|216171 pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|240407 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240407 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235330 PRK05015, PRK05015, aminopeptidase B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235330 PRK05015, PRK05015, aminopeptidase B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217232 pfam02789, Peptidase_M17_N, Cytosol aminopeptidase family, N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|217232 pfam02789, Peptidase_M17_N, Cytosol aminopeptidase family, N-terminal domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 963 | |||
| COG0260 | 485 | PepB Leucyl aminopeptidase [Amino acid transport a | 100.0 | |
| PRK00913 | 483 | multifunctional aminopeptidase A; Provisional | 100.0 | |
| cd00433 | 468 | Peptidase_M17 Cytosol aminopeptidase family, N-ter | 100.0 | |
| PTZ00412 | 569 | leucyl aminopeptidase; Provisional | 100.0 | |
| COG0260 | 485 | PepB Leucyl aminopeptidase [Amino acid transport a | 100.0 | |
| PRK00913 | 483 | multifunctional aminopeptidase A; Provisional | 100.0 | |
| cd00433 | 468 | Peptidase_M17 Cytosol aminopeptidase family, N-ter | 100.0 | |
| PTZ00412 | 569 | leucyl aminopeptidase; Provisional | 100.0 | |
| PF00883 | 311 | Peptidase_M17: Cytosol aminopeptidase family, cata | 100.0 | |
| PRK05015 | 424 | aminopeptidase B; Provisional | 100.0 | |
| PF00883 | 311 | Peptidase_M17: Cytosol aminopeptidase family, cata | 100.0 | |
| KOG2597|consensus | 513 | 100.0 | ||
| PRK05015 | 424 | aminopeptidase B; Provisional | 100.0 | |
| KOG2597|consensus | 513 | 100.0 | ||
| PF02789 | 126 | Peptidase_M17_N: Cytosol aminopeptidase family, N- | 99.72 | |
| PF02789 | 126 | Peptidase_M17_N: Cytosol aminopeptidase family, N- | 99.34 | |
| PRK04443 | 348 | acetyl-lysine deacetylase; Provisional | 90.22 | |
| PRK06915 | 422 | acetylornithine deacetylase; Validated | 89.06 | |
| PRK04443 | 348 | acetyl-lysine deacetylase; Provisional | 88.97 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 88.74 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 88.62 | |
| PRK13009 | 375 | succinyl-diaminopimelate desuccinylase; Reviewed | 88.5 | |
| PRK06915 | 422 | acetylornithine deacetylase; Validated | 88.17 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 87.42 | |
| PRK13004 | 399 | peptidase; Reviewed | 87.13 | |
| PRK13009 | 375 | succinyl-diaminopimelate desuccinylase; Reviewed | 86.86 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 86.85 | |
| PRK13004 | 399 | peptidase; Reviewed | 86.54 | |
| PRK13983 | 400 | diaminopimelate aminotransferase; Provisional | 86.39 | |
| PRK08652 | 347 | acetylornithine deacetylase; Provisional | 85.68 | |
| PRK06133 | 410 | glutamate carboxypeptidase; Reviewed | 84.79 | |
| PRK13983 | 400 | diaminopimelate aminotransferase; Provisional | 84.76 | |
| PRK06133 | 410 | glutamate carboxypeptidase; Reviewed | 84.57 | |
| PRK09104 | 464 | hypothetical protein; Validated | 83.98 | |
| PRK08596 | 421 | acetylornithine deacetylase; Validated | 83.78 | |
| PRK06837 | 427 | acetylornithine deacetylase; Provisional | 83.49 | |
| PRK08588 | 377 | succinyl-diaminopimelate desuccinylase; Reviewed | 83.21 | |
| PRK09104 | 464 | hypothetical protein; Validated | 82.89 | |
| PRK07906 | 426 | hypothetical protein; Provisional | 82.49 | |
| PRK07907 | 449 | hypothetical protein; Provisional | 82.37 | |
| PRK07906 | 426 | hypothetical protein; Provisional | 81.75 | |
| PRK06837 | 427 | acetylornithine deacetylase; Provisional | 81.26 | |
| PRK08588 | 377 | succinyl-diaminopimelate desuccinylase; Reviewed | 81.24 | |
| PRK09133 | 472 | hypothetical protein; Provisional | 80.01 |
| >COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-138 Score=1181.61 Aligned_cols=466 Identities=43% Similarity=0.691 Sum_probs=429.7
Q ss_pred CCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEEEcCCCCCcCCHHHHHHH
Q psy3774 475 KTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKI 552 (963)
Q Consensus 475 ~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllvGLG~~~~~~~~~~~r~a 552 (963)
...++++..+ ..+......+| ..+.++.+.+.++|+|+.|+++.++.. ....+|+++||||+ .+ ++.+++|++
T Consensus 13 ~~~~i~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~g~~~~~~~~-~~~~~~~~~vglg~-~~-~~~~~~~~~ 87 (485)
T COG0260 13 LSVTIVVGLF--AELAAEAIALDEKSEGILSWLLKAGEFSGKAGQVLLLPGS-VGSVKRVLLVGLGK-RK-LSEDTLRRA 87 (485)
T ss_pred cceEEEeecc--ccchhhhhhcccchhhhHHHHHHhhcccccCCceEEeecc-CCccceEEEEeecC-Cc-CCHHHHHHH
Confidence 3345555544 33334444556 347788888889999999999999875 22368999999999 77 999999999
Q ss_pred HHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCceEEEEEecCcchhhHHHH
Q psy3774 553 IQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNA 632 (963)
Q Consensus 553 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 632 (963)
.+.+.+.+++....++.+.++.++ ..+.++.+++|+.++.|+|++||+.+++.+.++.++.+.... +..+.+
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~Y~f~~yk~~k~~~~~~~~~v~~~~~~---~~~~~~ 159 (485)
T COG0260 88 AGAAARALKKGKAWEVTLLLPELP-----AAEIAAAAVEGFLLGSYRFDRYKSEKKEPDKELPKVTLLVPA---KSAEKA 159 (485)
T ss_pred HHHHHHHhhcCCceEEEEeccccc-----hHHHHHHHHHHHHhcccchhhccccccccccccceEEEeccc---hhhHHH
Confidence 999999999989899998888764 457899999999999999999999886654446677777642 256789
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 633 IIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 712 (963)
Q Consensus 633 ~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~ 712 (963)
+++++++++++++||||+|+|||+|||++||++++.+++.++++|+|+|+++|+++|||+||+|||||.+|||||+|+|+
T Consensus 160 ~~~~~ai~~~v~~aRdLvN~P~n~l~P~~la~~a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~ 239 (485)
T COG0260 160 IREGEAIAEGVNLARDLVNTPANILTPEELAERAELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYN 239 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCHHHHHHHHHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcC
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCC
Q psy3774 713 NGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGD 792 (963)
Q Consensus 713 g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm~~g~a~kPgD 792 (963)
|+++++++|+|||||||||||||||||+.+|++||+||||||+|+|+|.+++++++|+||++++|+|||||||+||||||
T Consensus 240 g~~~~~~~iaLVGKGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~l~vnv~~vl~~~ENm~~g~A~rPGD 319 (485)
T COG0260 240 GKGKAKKPIALVGKGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELKLPVNVVGVLPAVENMPSGNAYRPGD 319 (485)
T ss_pred CCCCCCceEEEEcCceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHcCCCceEEEEEeeeccCCCCCCCCCCC
Confidence 99877899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCCccchHHHHHHHHHHHhH
Q psy3774 793 IVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKM 872 (963)
Q Consensus 793 Vits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~~~~~~l~~~l~~ag~~ 872 (963)
|||+||||||||.||||||||||||||+||+++||+.|||+|||||||+||||++++|+||||| +|+++|.+||+.
T Consensus 320 Vits~~GkTVEV~NTDAEGRLVLADaLtYA~~~kp~~iID~ATLTGA~~vALG~~~~g~fs~dd----~La~~l~~As~~ 395 (485)
T COG0260 320 VITSMNGKTVEVLNTDAEGRLVLADALTYAEELKPDLIIDVATLTGAAVVALGNDYTGLFSNDD----ELANQLLAASEE 395 (485)
T ss_pred eEEecCCcEEEEcccCccHHHHHHHHHHHHHHcCCCEEEEehhhHhHHHHHhCCCccccccCCH----HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCCcEeeCCCChhhHhhcCCCcccccCCCC-CCcchhHHHHHHHhccCCCCeEEEeeccCCccCC---CCCCCCcchHHH
Q psy3774 873 SGDTAWNMPIEDRYQKQLKSNFADISNIGN-SSADSITAACFLENFTKKYVWAHLDIAGVAWKSG---DKKGATGRPVTL 948 (963)
Q Consensus 873 ~gE~~W~lPl~~~y~~~lkS~vADl~N~g~-~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~~~~---~~kGaTG~gvr~ 948 (963)
+||++|||||+++|+++|+|+||||+|+|+ |+|||||||+||+||++++||+|||||||||.++ .++||||+||||
T Consensus 396 ~gE~~WrLPl~~~y~~~l~S~~ADl~N~~~~~~gGaitAA~FL~~Fv~~~~WaHlDIAGta~~~~~~~~~~GAtG~~Vrt 475 (485)
T COG0260 396 TGEPLWRLPLHEEYRKQLKSNFADLANIGGGRFGGAITAALFLSEFVENVPWAHLDIAGTAWKSGSPYWPKGATGVGVRT 475 (485)
T ss_pred cCCccccCCCCHHHHhhcCCcchhhhcCCCCCCCcHHHHHHHHHHHcCCCCeEEEEeccccccCCCCcCCCCCeeccHHH
Confidence 999999999999999999999999999998 8999999999999999999999999999999886 599999999999
Q ss_pred HHHHHHhhC
Q psy3774 949 LTYYLMLKS 957 (963)
Q Consensus 949 L~~~l~~~~ 957 (963)
|++||++++
T Consensus 476 L~~~l~~~~ 484 (485)
T COG0260 476 LAQFLLNRA 484 (485)
T ss_pred HHHHHHHhc
Confidence 999999875
|
|
| >PRK00913 multifunctional aminopeptidase A; Provisional | Back alignment and domain information |
|---|
| >cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
|---|
| >PTZ00412 leucyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK00913 multifunctional aminopeptidase A; Provisional | Back alignment and domain information |
|---|
| >cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains | Back alignment and domain information |
|---|
| >PTZ00412 leucyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK05015 aminopeptidase B; Provisional | Back alignment and domain information |
|---|
| >PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG2597|consensus | Back alignment and domain information |
|---|
| >PRK05015 aminopeptidase B; Provisional | Back alignment and domain information |
|---|
| >KOG2597|consensus | Back alignment and domain information |
|---|
| >PF02789 Peptidase_M17_N: Cytosol aminopeptidase family, N-terminal domain; InterPro: IPR008283 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF02789 Peptidase_M17_N: Cytosol aminopeptidase family, N-terminal domain; InterPro: IPR008283 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK04443 acetyl-lysine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK04443 acetyl-lysine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK13004 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK13004 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK13983 diaminopimelate aminotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK08652 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK06133 glutamate carboxypeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK13983 diaminopimelate aminotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK06133 glutamate carboxypeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK09104 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08596 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK09104 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK07906 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07907 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07906 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK09133 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 963 | ||||
| 3h8e_A | 497 | Low Ph Native Structure Of Leucine Aminopeptidase F | 1e-118 | ||
| 1gyt_A | 503 | E. Coli Aminopeptidase A (Pepa) Length = 503 | 1e-113 | ||
| 3jru_B | 490 | Crystal Structure Of Leucyl Aminopeptidase (Pepa) F | 1e-103 | ||
| 3pei_A | 486 | Crystal Structure Of Cytosol Aminopeptidase From Fr | 2e-68 | ||
| 1bpm_A | 487 | Differentiation And Identification Of The Two Catal | 5e-63 | ||
| 1bll_E | 488 | X-Ray Crystallographic Determination Of The Structu | 5e-63 | ||
| 2ewb_A | 486 | The Crystal Structure Of Bovine Lens Leucine Aminop | 5e-63 | ||
| 1lcp_A | 484 | Bovine Lens Leucine Aminopeptidase Complexed With L | 5e-63 | ||
| 2j9a_A | 487 | Bllap In Complex With Microginin Fr1 Length = 487 | 6e-63 | ||
| 3kqx_A | 528 | Structure Of A Protease 1 Length = 528 | 6e-59 | ||
| 3kzw_A | 515 | Crystal Structure Of Cytosol Aminopeptidase From St | 2e-57 | ||
| 3ij3_A | 482 | 1.8 Angstrom Resolution Crystal Structure Of Cytoso | 1e-44 | ||
| 4efd_A | 522 | Crystal Structure Of An M17 Aminopeptidase From Try | 5e-38 | ||
| 2hb6_A | 491 | Structure Of Caenorhabditis Elegans Leucine Aminope | 7e-33 |
| >pdb|3H8E|A Chain A, Low Ph Native Structure Of Leucine Aminopeptidase From Pseud Putida Length = 497 | Back alignment and structure |
|
| >pdb|1GYT|A Chain A, E. Coli Aminopeptidase A (Pepa) Length = 503 | Back alignment and structure |
| >pdb|3JRU|B Chain B, Crystal Structure Of Leucyl Aminopeptidase (Pepa) From Xoo0834, Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 490 | Back alignment and structure |
| >pdb|3PEI|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Francisella Tularensis Length = 486 | Back alignment and structure |
| >pdb|1BPM|A Chain A, Differentiation And Identification Of The Two Catalytic Metal Binding Sites In Bovine Lens Leucine Aminopeptidase By X-Ray Crystallography Length = 487 | Back alignment and structure |
| >pdb|1BLL|E Chain E, X-Ray Crystallographic Determination Of The Structure Of Bovine Lens Leucine Aminopeptidase Complexed With Amastatin: Formulation Of A Catalytic Mechanism Featuring A Gem-Diolate Transition State Length = 488 | Back alignment and structure |
| >pdb|2EWB|A Chain A, The Crystal Structure Of Bovine Lens Leucine Aminopeptidase In Complex With Zofenoprilat Length = 486 | Back alignment and structure |
| >pdb|1LCP|A Chain A, Bovine Lens Leucine Aminopeptidase Complexed With L-Leucine Phosphonic Acid Length = 484 | Back alignment and structure |
| >pdb|2J9A|A Chain A, Bllap In Complex With Microginin Fr1 Length = 487 | Back alignment and structure |
| >pdb|3KQX|A Chain A, Structure Of A Protease 1 Length = 528 | Back alignment and structure |
| >pdb|3KZW|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Staphylococcus Aureus Col Length = 515 | Back alignment and structure |
| >pdb|3IJ3|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Cytosol Aminopeptidase From Coxiella Burnetii Length = 482 | Back alignment and structure |
| >pdb|4EFD|A Chain A, Crystal Structure Of An M17 Aminopeptidase From Trypanosoma Brucei, Tb427tmp.02.4440 Length = 522 | Back alignment and structure |
| >pdb|2HB6|A Chain A, Structure Of Caenorhabditis Elegans Leucine Aminopeptidase (Lap1) Length = 491 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Length = 503 | Back alignment and structure |
|---|
Score = 622 bits (1606), Expect = 0.0
Identities = 219/506 (43%), Positives = 331/506 (65%), Gaps = 15/506 (2%)
Query: 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDIDK--YGEITNILKSGDLNEKL 515
M+F +K + S ++ C+VVG+F+ +LS I + +DK G I+ +L+ G+L K
Sbjct: 1 MEFSVK----SGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKP 56
Query: 516 GSTLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFN 575
G TLLL ++ + ++RILL+ G K++++ E + ++IQ +N + G+ + L
Sbjct: 57 GQTLLLHHVPNVLSERILLIGCG-KERELDERQYKQVIQKTINTLNDTGSMEAVCFLTEL 115
Query: 576 KIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYI-DGKNAII 634
++ N + + + + LY D K+ K + ++K++F + + + G+ AI
Sbjct: 116 HVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQ 175
Query: 635 YGCAISKGIELTKNLGNLSANICTPTYLENISKKLS--FDYKMDIEIINREQMQRLKMGS 692
+G AI+ GI+ K+LGN+ NIC YL + +++L+ + + +I +QM+ L M S
Sbjct: 176 HGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHS 235
Query: 693 LLSVTHGSSEPPKLIIIKYMNGKFKEA-PIVLVGKGVTFDTGGISIKPSYSMDEMKYDMC 751
L+V GS + +I+Y ++A PIVLVGKG+TFD+GGISIKPS MDEMKYDMC
Sbjct: 236 YLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMC 295
Query: 752 GAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEG 811
GAA++ G + ++E+ L +N+IGV+ ENM G + +PGD++ +MSG+T+EVL+TDAEG
Sbjct: 296 GAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEG 355
Query: 812 RLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGK 871
RL+LCD LTYVERF+P VID+ATLTGACV+ALGHH +GL + ++ L +L+ A +
Sbjct: 356 RLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNP----LAHELIAASE 411
Query: 872 MSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGV 931
SGD AW +P+ D YQ+QL+SNFAD++NIG +ITA CFL FT+KY WAHLDIAG
Sbjct: 412 QSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGT 471
Query: 932 AWKSGDKKGATGRPVTLLTYYLMLKS 957
AW+SG KGATGRPV LL +L+ ++
Sbjct: 472 AWRSGKAKGATGRPVALLAQFLLNRA 497
|
| >1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Length = 503 | Back alignment and structure |
|---|
| >3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Length = 497 | Back alignment and structure |
|---|
| >3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Length = 497 | Back alignment and structure |
|---|
| >3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Length = 490 | Back alignment and structure |
|---|
| >3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Length = 490 | Back alignment and structure |
|---|
| >3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Length = 486 | Back alignment and structure |
|---|
| >3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Length = 486 | Back alignment and structure |
|---|
| >3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Length = 515 | Back alignment and structure |
|---|
| >3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Length = 515 | Back alignment and structure |
|---|
| >3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Length = 528 | Back alignment and structure |
|---|
| >3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Length = 528 | Back alignment and structure |
|---|
| >1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Length = 484 | Back alignment and structure |
|---|
| >1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Length = 484 | Back alignment and structure |
|---|
| >4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Length = 522 | Back alignment and structure |
|---|
| >4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Length = 522 | Back alignment and structure |
|---|
| >2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Length = 491 | Back alignment and structure |
|---|
| >2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Length = 491 | Back alignment and structure |
|---|
| >3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Length = 482 | Back alignment and structure |
|---|
| >3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Length = 482 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 963 | |||
| 3h8g_F | 497 | Cytosol aminopeptidase; hydrolase, manganese, meta | 100.0 | |
| 3jru_B | 490 | Probable cytosol aminopeptidase; bacterial blight, | 100.0 | |
| 1gyt_A | 503 | Cytosol aminopeptidase; hydrolase, DNA recombinati | 100.0 | |
| 3pei_A | 486 | Cytosol aminopeptidase; structural genomics, cente | 100.0 | |
| 3kzw_A | 515 | Cytosol aminopeptidase; hydrolase, manganese bindi | 100.0 | |
| 3kr4_A | 528 | M17 leucyl aminopeptidase; protease, hydrolase; HE | 100.0 | |
| 1lam_A | 484 | Leucine aminopeptidase; exopeptidase, metallopepti | 100.0 | |
| 3h8g_F | 497 | Cytosol aminopeptidase; hydrolase, manganese, meta | 100.0 | |
| 3jru_B | 490 | Probable cytosol aminopeptidase; bacterial blight, | 100.0 | |
| 1gyt_A | 503 | Cytosol aminopeptidase; hydrolase, DNA recombinati | 100.0 | |
| 3ij3_A | 482 | Cytosol aminopeptidase; PEPB, peptidase M17 family | 100.0 | |
| 3pei_A | 486 | Cytosol aminopeptidase; structural genomics, cente | 100.0 | |
| 3kzw_A | 515 | Cytosol aminopeptidase; hydrolase, manganese bindi | 100.0 | |
| 3kr4_A | 528 | M17 leucyl aminopeptidase; protease, hydrolase; HE | 100.0 | |
| 1lam_A | 484 | Leucine aminopeptidase; exopeptidase, metallopepti | 100.0 | |
| 2hc9_A | 491 | Leucine aminopeptidase 1; carbonate, structural ge | 100.0 | |
| 3ij3_A | 482 | Cytosol aminopeptidase; PEPB, peptidase M17 family | 100.0 | |
| 4efd_A | 522 | Aminopeptidase; structural genomics, structural ge | 100.0 | |
| 2hc9_A | 491 | Leucine aminopeptidase 1; carbonate, structural ge | 100.0 | |
| 4efd_A | 522 | Aminopeptidase; structural genomics, structural ge | 100.0 | |
| 4h2k_A | 269 | Succinyl-diaminopimelate desuccinylase; DAPE, MCSG | 91.16 | |
| 4h2k_A | 269 | Succinyl-diaminopimelate desuccinylase; DAPE, MCSG | 90.74 | |
| 3rza_A | 396 | Tripeptidase; phosphorylase/hydrolase-like, struct | 90.03 | |
| 1cg2_A | 393 | Carboxypeptidase G2; metallocarboxypeptidase, hydr | 89.38 | |
| 1cg2_A | 393 | Carboxypeptidase G2; metallocarboxypeptidase, hydr | 89.15 | |
| 3pfo_A | 433 | Putative acetylornithine deacetylase; metal bindin | 88.8 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 88.29 | |
| 3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putati | 88.04 | |
| 3gb0_A | 373 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 88.03 | |
| 3t68_A | 268 | Succinyl-diaminopimelate desuccinylase; DAPE, csgi | 87.4 | |
| 3gb0_A | 373 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 86.78 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 86.58 | |
| 3tx8_A | 369 | Succinyl-diaminopimelate desuccinylase; peptidase, | 86.04 | |
| 1vhe_A | 373 | Aminopeptidase/glucanase homolog; structural genom | 85.97 | |
| 3pfo_A | 433 | Putative acetylornithine deacetylase; metal bindin | 85.92 | |
| 3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putati | 85.86 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 85.78 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 85.52 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 84.92 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 84.67 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 84.14 | |
| 1vhe_A | 373 | Aminopeptidase/glucanase homolog; structural genom | 84.0 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 83.44 | |
| 3rza_A | 396 | Tripeptidase; phosphorylase/hydrolase-like, struct | 83.13 | |
| 3isz_A | 377 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 82.68 | |
| 1xmb_A | 418 | IAA-amino acid hydrolase homolog 2; structural gen | 82.28 | |
| 1vgy_A | 393 | Succinyl-diaminopimelate desuccinylase; structural | 82.15 | |
| 2gre_A | 349 | Deblocking aminopeptidase; structural genomi prote | 81.91 | |
| 1fno_A | 417 | Peptidase T; metallo peptidase, protease, hydrolas | 81.68 | |
| 3isz_A | 377 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 81.68 | |
| 1vgy_A | 393 | Succinyl-diaminopimelate desuccinylase; structural | 81.29 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 81.04 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 80.85 | |
| 2gre_A | 349 | Deblocking aminopeptidase; structural genomi prote | 80.42 |
| >3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-142 Score=1224.47 Aligned_cols=491 Identities=46% Similarity=0.780 Sum_probs=461.0
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEE
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLV 535 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllv 535 (963)
|+|+++ +..+.+.+.|+|||+|+++..+++..+.+| +.+.|+++++..+|+||.||++.++.+++...+|+++|
T Consensus 1 M~~~~~----~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~rv~lv 76 (497)
T 3h8g_F 1 MELVVK----SVAAASVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLV 76 (497)
T ss_dssp CEEEEE----CSCGGGCCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEE
T ss_pred CEEEEE----cCChhhccCCEEEEEEecCCccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEE
Confidence 899998 677888999999999999877777777777 78999999999999999999999998887788999999
Q ss_pred EcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccch-HHHHHHHHHHHhcCcccCCCccCCCCCCccCc
Q psy3774 536 NLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNL-SCLIIRTIIIISDNLYRSDAQKSKKKPIKINI 614 (963)
Q Consensus 536 GLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l 614 (963)
|||+ .++++.+.+|++++.++|.+++.+++++.+.++.......+. .+.++++++|+.++.|+|++||++++++ +++
T Consensus 77 GlG~-~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~~~-~~l 154 (497)
T 3h8g_F 77 GSGK-DEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVEP-RAL 154 (497)
T ss_dssp EEES-SSCBCHHHHHHHHHHHHHHHHHSCCSEEEECCTTCCBTTSCTTTHHHHHHHHHHHHTTCCCCTTCSSCCCC-CSC
T ss_pred ECCC-cccCCHHHHHHHHHHHHHHHhhCCCceEEEecccccccccchhhHHHHHHHHHHHhcCccccccccCccCC-Ccc
Confidence 9999 888999999999999999999999999999888765444443 5678999999999999999999987543 357
Q ss_pred eEEEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhC-CCeEEEeCHHHHHhcCCCeE
Q psy3774 615 KKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSL 693 (963)
Q Consensus 615 ~~l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~-g~~v~V~d~~~l~~~gmg~~ 693 (963)
+++.++....+.++.++++++++++++++++||||+|+|||+|||++||++++++++++ |++|+|+|+++|+++|||+|
T Consensus 155 ~~l~l~~~~~~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~ 234 (497)
T 3h8g_F 155 KKVTLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAF 234 (497)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHH
T ss_pred cEEEEEcCCcchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcE
Confidence 78888764333456788999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred eeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEE
Q psy3774 694 LSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNII 773 (963)
Q Consensus 694 laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~ 773 (963)
|+|||||.+|||||+|+|+|+++.++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++||||+
T Consensus 235 laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~ 314 (497)
T 3h8g_F 235 YAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLV 314 (497)
T ss_dssp HHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHTCSSEEE
T ss_pred EEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcCCCeEEE
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEee
Q psy3774 774 GVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFS 853 (963)
Q Consensus 774 ~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~s 853 (963)
++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+||
T Consensus 315 ~~i~~~ENm~~g~A~rPgDVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~~~~g~~s 394 (497)
T 3h8g_F 315 CLLACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYAERFKPQAVIDIATLTGACIVALGSHTTGLMG 394 (497)
T ss_dssp EEEEEEEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTTTSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCCchhhhhhHHHHHHHHhcCCCEEEEecccHHHHHHHhCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeeccCCc
Q psy3774 854 RNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAW 933 (963)
Q Consensus 854 n~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~ 933 (963)
||| +|+++|++||+.+||++||||||++|+++|||++|||+|+|+|+||+||||+||++||+++||+|||||||+|
T Consensus 395 n~d----~l~~~l~~ag~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~ 470 (497)
T 3h8g_F 395 NND----DLVGQLLDAGKRADDRAWQLPLFDEYQEQLDSPFADMGNIGGPKAGTITAGCFLSRFAKAYNWAHMDIAGTAW 470 (497)
T ss_dssp SCH----HHHHHHHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSSSHHHHHHHHHHTTCTTSCEEEEECTTTSE
T ss_pred CCH----HHHHHHHHHHHHhCCCeEeCCCCHHHHHhcCCCeeceeCCCCCchhhHHHHHHHHHhCCCCCEEEEeCCCCCc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCcchHHHHHHHHHhhCC
Q psy3774 934 KS-GDKKGATGRPVTLLTYYLMLKSP 958 (963)
Q Consensus 934 ~~-~~~kGaTG~gvr~L~~~l~~~~~ 958 (963)
.+ +.++|+||+|||||++||+++++
T Consensus 471 ~~~~~~~g~TG~~vr~L~~~l~~~~~ 496 (497)
T 3h8g_F 471 ISGGKDKGATGRPVPLLTQYLLDRAG 496 (497)
T ss_dssp ECSSTTCEECCTTHHHHHHHHHHHHT
T ss_pred cCCCCCCCcccHHHHHHHHHHHHhhc
Confidence 76 45799999999999999998753
|
| >3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
| >1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 | Back alignment and structure |
|---|
| >3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
| >3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* | Back alignment and structure |
|---|
| >1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* | Back alignment and structure |
|---|
| >3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* | Back alignment and structure |
|---|
| >3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
| >1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 | Back alignment and structure |
|---|
| >3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
| >3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* | Back alignment and structure |
|---|
| >1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* | Back alignment and structure |
|---|
| >2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A | Back alignment and structure |
|---|
| >3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} | Back alignment and structure |
|---|
| >4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A | Back alignment and structure |
|---|
| >4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
|---|
| >3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A | Back alignment and structure |
|---|
| >3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A | Back alignment and structure |
|---|
| >1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A | Back alignment and structure |
|---|
| >1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A | Back alignment and structure |
|---|
| >3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A | Back alignment and structure |
|---|
| >1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 963 | ||||
| d1gyta2 | 325 | c.56.5.3 (A:179-503) Leucine aminopeptidase, C-ter | 2e-98 | |
| d1gyta2 | 325 | c.56.5.3 (A:179-503) Leucine aminopeptidase, C-ter | 3e-92 | |
| d1lama1 | 325 | c.56.5.3 (A:160-484) Leucine aminopeptidase, C-ter | 4e-80 | |
| d1lama1 | 325 | c.56.5.3 (A:160-484) Leucine aminopeptidase, C-ter | 1e-74 | |
| d1gyta1 | 178 | c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminope | 8e-23 | |
| d1gyta1 | 178 | c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminope | 5e-15 | |
| d1lama2 | 159 | c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminope | 1e-11 | |
| d1lama2 | 159 | c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminope | 2e-08 |
| >d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Leucine aminopeptidase, C-terminal domain domain: Leucine aminopeptidase, C-terminal domain species: Escherichia coli, PepA [TaxId: 562]
Score = 310 bits (794), Expect = 2e-98
Identities = 170/320 (53%), Positives = 231/320 (72%), Gaps = 7/320 (2%)
Query: 638 AISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDI--EIINREQMQRLKMGSLLS 695
AI+ GI+ K+LGN+ NIC YL + +++L+ Y ++ +I +QM+ L M S L+
Sbjct: 1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLA 60
Query: 696 VTHGSSEPPKLIIIKYMNGKFKEA-PIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAA 754
V GS + +I+Y ++A PIVLVGKG+TFD+GGISIKPS MDEMKYDMCGAA
Sbjct: 61 VGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAA 120
Query: 755 SILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLI 814
++ G + ++E+ L +N+IGV+ ENM G + +PGD++ +MSG+T+EVL+TDAEGRL+
Sbjct: 121 AVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLV 180
Query: 815 LCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSG 874
LCD LTYVERF+P VID+ATLTGACV+ALGHH +GL + ++ +L+ A + SG
Sbjct: 181 LCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELI----AASEQSG 236
Query: 875 DTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWK 934
D AW +P+ D YQ+QL+SNFAD++NIG +ITA CFL FT+KY WAHLDIAG AW+
Sbjct: 237 DRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWR 296
Query: 935 SGDKKGATGRPVTLLTYYLM 954
SG KGATGRPV LL +L+
Sbjct: 297 SGKAKGATGRPVALLAQFLL 316
|
| >d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 325 | Back information, alignment and structure |
|---|
| >d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 325 | Back information, alignment and structure |
|---|
| >d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 325 | Back information, alignment and structure |
|---|
| >d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 178 | Back information, alignment and structure |
|---|
| >d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 178 | Back information, alignment and structure |
|---|
| >d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 159 | Back information, alignment and structure |
|---|
| >d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 159 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 963 | |||
| d1gyta2 | 325 | Leucine aminopeptidase, C-terminal domain {Escheri | 100.0 | |
| d1lama1 | 325 | Leucine aminopeptidase, C-terminal domain {Cow (Bo | 100.0 | |
| d1gyta2 | 325 | Leucine aminopeptidase, C-terminal domain {Escheri | 100.0 | |
| d1lama1 | 325 | Leucine aminopeptidase, C-terminal domain {Cow (Bo | 100.0 | |
| d1gyta1 | 178 | Leucine aminopeptidase (Aminopeptidase A), N-termi | 99.9 | |
| d1gyta1 | 178 | Leucine aminopeptidase (Aminopeptidase A), N-termi | 99.66 | |
| d1lama2 | 159 | Leucine aminopeptidase (Aminopeptidase A), N-termi | 99.63 | |
| d1lama2 | 159 | Leucine aminopeptidase (Aminopeptidase A), N-termi | 99.53 | |
| d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 93.65 | |
| d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 93.47 | |
| d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacil | 92.57 | |
| d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacil | 92.05 | |
| d1yloa2 | 264 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 89.22 | |
| d1yloa2 | 264 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 89.11 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 86.25 | |
| d1vgya1 | 262 | Succinyl-diaminopimelate desuccinylase, catalytic | 85.32 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 85.1 | |
| g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapi | 84.03 | |
| g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapi | 83.73 | |
| d1yd9a1 | 188 | Histone macro-H2a1.1 {Rat (Rattus norvegicus) [Tax | 83.24 | |
| d1vhoa2 | 248 | Putative endoglucanase TM1048, catalytic domain {T | 81.43 | |
| d2hgaa1 | 103 | Uncharacterized protein MTH1368 {Methanobacterium | 81.36 | |
| d1vhoa2 | 248 | Putative endoglucanase TM1048, catalytic domain {T | 80.53 |
| >d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Leucine aminopeptidase, C-terminal domain domain: Leucine aminopeptidase, C-terminal domain species: Escherichia coli, PepA [TaxId: 562]
Probab=100.00 E-value=8e-119 Score=979.23 Aligned_cols=317 Identities=54% Similarity=0.960 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCC--CeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCCC
Q psy3774 638 AISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK--MDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGK 715 (963)
Q Consensus 638 ~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g--~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~~ 715 (963)
++++|+|+||||+|+|||+|||++|++++++++++++ ++|+|+|+++|+++|||+||||||||.+|||||+|+|+|++
T Consensus 1 Aia~gvn~aRdLvn~P~N~ltP~~~a~~a~~l~~~~~~~v~v~V~~~~~l~~~Gm~~llaVg~GS~~~p~li~l~y~~~~ 80 (325)
T d1gyta2 1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 80 (325)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred CHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCCeEEEEecHHHHHhCCCCCeeEEeeccCCCCCceEEEecCcc
Confidence 5899999999999999999999999999999999874 88899999999999999999999999999999999999976
Q ss_pred CC-CCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCCEE
Q psy3774 716 FK-EAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIV 794 (963)
Q Consensus 716 ~~-~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm~~g~a~kPgDVi 794 (963)
.. +++|+|||||||||||||||||+.+|.+||+||+|||+|+|+|++++++++|+||++++|+||||||++||||||||
T Consensus 81 ~~~~~~i~lVGKGitFDTGG~slKp~~~M~~Mk~DM~GAA~v~g~~~a~a~l~~~~~v~~~~p~~EN~i~~~A~kPgDVi 160 (325)
T d1gyta2 81 SEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVL 160 (325)
T ss_dssp CTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCCTTCEE
T ss_pred cCCCCCEEEEccceEEeccccccccccchhhhhhhcccchhHHHHHHHHHHhCcCceEEEEEehhhcccCCCcccCCCee
Confidence 54 57899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCCccchHHHHHHHHHHHhHcC
Q psy3774 795 VSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSG 874 (963)
Q Consensus 795 ts~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~~~~~~l~~~l~~ag~~~g 874 (963)
++||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||+ ++++++++||+.+|
T Consensus 161 ~s~~GkTVEI~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~~ALG~~~ag~~~n~~----~~~~~~~~a~~~~g 236 (325)
T d1gyta2 161 TTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHN----PLAHELIAASEQSG 236 (325)
T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHGGGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCH----HHHHHHHHHHHHHT
T ss_pred eccCCcEEEeeccCccchhhhhHHHHHHHhhCCceeecccccccceeeeccCceeEeeccch----HHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CcEeeCCCChhhHhhcCCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeeccCCccCCCCCCCCcchHHHHHHHHH
Q psy3774 875 DTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDKKGATGRPVTLLTYYLM 954 (963)
Q Consensus 875 E~~W~lPl~~~y~~~lkS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~~~~~~kGaTG~gvr~L~~~l~ 954 (963)
|++||||||++|++++||++|||+|+|+++||+|+||+||++|++++||+|||||||||.+..++|+||+|||||+|||+
T Consensus 237 e~~w~lPl~~~~~~~~~S~~ADl~n~~~~~~g~~~aA~FL~~Fv~~~~w~HlDIAg~a~~~~~~~gaTG~gvr~l~~~l~ 316 (325)
T d1gyta2 237 DRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLL 316 (325)
T ss_dssp CCEEECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSEECGGGCEECCTTHHHHHHHHH
T ss_pred CccccccccHhHHhhcCCCccccccCCCCCchHHHHHHHHHHhCCCCCEEEEecCCCCcCCCCCCCccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887789999999999999999
Q ss_pred hhCC
Q psy3774 955 LKSP 958 (963)
Q Consensus 955 ~~~~ 958 (963)
++++
T Consensus 317 ~~~~ 320 (325)
T d1gyta2 317 NRAG 320 (325)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 9875
|
| >d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
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| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
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| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
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| >d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
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| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
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| >d1yd9a1 c.50.1.2 (A:6-193) Histone macro-H2a1.1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368 {Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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