Psyllid ID: psy3833

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------109
MKHSASTPISSPLNNNNGTWHKKSYSEMNGSYSPVSWNGNVSTLEMLNGSLDSSLACSPSSPCKEARAKLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPTDTSSISLADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS
cccccccccccccccccccEEEccccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHccHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHccccccccccEEEEcccHHHHccccccHHHHHHHcHHHHHHHHHHHHHcccEEEcccccEEEEEEEccccccccEEEccccccccccccccEEEcccHHHHHHHHcccccccccccEEEEEEccccccccccHHHHEEEccccccccccccEEEEEcccEEEEEEccccccccccccccccEEEcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccEEcccHHHHHHHHHHcccHHHHHHcccEEEccccccccccccccccccccccEEEEEccccccccccccccccEEEccHHHHHHHHHHcccccccccccccccccccEEcccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccEEEEEEccccccccccccccHHHHcccHHHHccccccccccccccccccEEEccccccccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHccccccEEEEEEHHHHHHHHHcccccccEEEccccccccccccccEEEEcccccccccccEEEEEEcccccEEEEEEEccccHHHHHHHHHcccccHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEcccccccEEEEcccccccccccccccccccHHHHHccccEEEEEccEEcccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHccccHHHHHHHHHHHHHccccccc
cccccccccccccccccccccccccccccccccccEccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHccccccccccEEEEcccEEEEEHHHHHHHHHHHHHHccccccccEEEEccccccEcccHHHHHHHHHHHcHHHHHHHHHHHHHHccEEEccccEcHHHHHHHHccccccEEEEccccHHHHHHHccEEEEccHHHHHHHHHcccEEEEccEEEEEEEEccccccccHHHHHHHHHHHHcccccEcEEEEEEcHHHHHccHHHHHHHHHHHHHHcEcEEEccccHHHHHHEcHHHHHccHHHHHHHHHHHHHHcEcEEEccccHHHEHHHccHHHHHHHHHHHHHHcEcEEEccccHHHHHHHHHcccHHHHHHHHHcHHHccccccccccEEEEEEccccccEEEcccccccEEEHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEcccEHHHHHHHHHccHHHHHHHccEEEcccccHHHHccEccccccccccEEEEEcccccccccccccccEEEEEccHHHHHHHHHHcEccccccccEEEcccccEEEccccccccccccccccccccEEcccccccccccccccccccEcccccccccccccEEEEEEEEEEccccEHHHHcccHHHHHHcEcHHHHHHHcccccEEcccccEccEEccccccEEcHHHHHHHHHHccccEEEEccccEcEcccccHHHHHHHHccEEEEEEccEcHHHHHHHHHcccEEEEEccHHHHHHcccccEEEEEcHHHccccccEEEEEEcccccEEEEEEEccccHHHHHHHHHcHHHHHHHHHHHHHHHHHccccEEcEEEEEEEEEEEEEccccccEEEEEcccccccccccccEEccccHHHHHHHcHEEEEccccEEcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccEEEccccEcccccccccEEEEEEEEcccccccHHHHEcccHHHHHHHHHHHHHHHccccc
mkhsastpissplnnnngtwhkksysemngsyspvswngnvSTLEMLNgsldsslacspsspckearaklvkpkslVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASkgrtladssyeaeqtgphsrlrpdrvAMQDATAQMAMLQFISsglprvavpstihcdhlieaqvggvedlkrAKSQNEEVYAFLRSAGakygvgfwhpgsgiIHQIILenyafpgllmigtdshtpnggglgglcigvggadavdvmadipwelkcpkviGVRLtgglkgwtssKDVILKVAGILtvkggtgaiieyhgpgidnisctgmgticnmgaeigattsvfpynkrineyhgpgidnisctgmgticnmgaeigattsvfpynqrinidnisctgmgticnmgaeigattsvfpynnRMYDFLKATLREDIAKEAMKYQslltpdegakydQLIELDlntlephvngpftpdlahPINKLGeaakkngwpmdiKVSLIgsctnasyedmSRCASIAKEAMahglksstpfnvtpgseqIRATIERDGIAQTLREFGgtvlanacgpcigqwnrkdvkmgeKNTIVNSynrnftgrndanpathafvtSPELVTALAIKgtlafdprsdtltgsdgkpfklrdpfgdelptkgfdpgvdtyqpppkdgsslsvdvdpksqrlqllepfdvwdkkdiKDMVVLIKVKGkcttdhisaagpwlkfrghldnisnnlfltatnaengemnkvknqltgqygpvNEVARAYKaagvpwvavgdenygegssrehaaleprhlggrAIIVKSFARIHEtnlkkqgllpltfanpsdydkiqpndrislvglkdlapgkpvtaqikhadgkveeiklnhsMNEQQITWFQaelptripawldSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLqsnvaqptdtssisladDDIDAALTDLQVTLegshislaspdimhvpELYDYLRclkpkrftMKAYKRLWVTCRELQLRFYKSredaqhsspinefslrgcevtpdvnlsqgkfiiklevpaadgmseMFLRCENEEQYASWMAACRLQLTENNS
mkhsastpissplnnnngTWHKKSYSEMNGSYSPVSWNGNVSTLEMLNGSLDSSLACSPSSPCKEaraklvkpkslvekarlnvatekslylssLNKEEQYASWMAACRLASKGRTLADSSYeaeqtgphsrlrpDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGglkgwtsskdVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHglksstpfnvtpgSEQIRATIERDGIAQTLREFGGTVLANACGPCIGqwnrkdvkmgEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGtlafdprsdtltgsdgkpfklrDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQllepfdvwdkkdiKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREhaaleprhlGGRAIIVKSFARIHETnlkkqgllpltFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPTDTSSISLADDDIDAALTDLQVTLEGShislaspdimhvPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKsredaqhsspinefslrgCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS
MKHSASTPISSPLNNNNGTWHKKSYSEMNGSYSPVSWNGNVSTLEMLNGsldsslacspsspcKEARAKLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNggglgglcigvggADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPtdtssisladddidaaltdlQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS
*********************************************************************************LNVATEKSLYLSSLNKEEQYASWMAACRLA***********************************MAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIA**********************IRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAF*********************************************************LQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENY*************RHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQ*************LADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKS*********INEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQ******
********************************************************************KLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTL*******************G**AKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLD**************TLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPTDTSSISLADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFY**************FSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACR*QLT****
**********SPLNNNNGTWHKKSYSEMNGSYSPVSWNGNVSTLEMLNGSLD*******************KPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGR*****************LRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPTDTSSISLADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKS********PINEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS
**********SP****N*TWHKKSY*EMNGSYSPVSWNGNVSTLEMLNGSLDSSLACSPSSPCKEARAKLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVA**TD*SSISLADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSRED*QHSSPINEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLT****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKHSASTPISSPLNNNNGTWHKKSYSEMNGSYSPVSWNGNVSTLEMLNGSLDSSLACSPSSPCKEARAKLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPAWLDSSLSIYEQGVKEFDTLRLRFKFYSIYDLNAKTDAVQVNLQSNVAQPTDTSSISLADDDIDAALTDLQVTLEGSHISLASPDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1087 2.2.26 [Sep-21-2011]
P34455777 Probable aconitate hydrat yes N/A 0.621 0.870 0.691 0.0
Q99KI0780 Aconitate hydratase, mito yes N/A 0.635 0.885 0.676 0.0
P20004780 Aconitate hydratase, mito yes N/A 0.635 0.885 0.672 0.0
Q9ER34780 Aconitate hydratase, mito yes N/A 0.635 0.885 0.674 0.0
Q99798780 Aconitate hydratase, mito yes N/A 0.635 0.885 0.672 0.0
P16276781 Aconitate hydratase, mito yes N/A 0.635 0.884 0.669 0.0
Q54XS2771 Probable aconitate hydrat yes N/A 0.638 0.900 0.614 0.0
P49609779 Aconitate hydratase, mito N/A N/A 0.624 0.871 0.620 0.0
O13966789 Aconitate hydratase, mito yes N/A 0.620 0.855 0.609 0.0
P19414778 Aconitate hydratase, mito yes N/A 0.623 0.871 0.592 0.0
>sp|P34455|ACON_CAEEL Probable aconitate hydratase, mitochondrial OS=Caenorhabditis elegans GN=aco-2 PE=1 SV=2 Back     alignment and function desciption
 Score = 1038 bits (2683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/751 (69%), Positives = 587/751 (78%), Gaps = 75/751 (9%)

Query: 132 RLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEE 191
           RLRPDRVAMQDATAQMAMLQFISSGLP+ AVPSTIHCDHLIEAQ GG +DL RAK  N+E
Sbjct: 87  RLRPDRVAMQDATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKE 146

Query: 192 VYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVG 251
           V+ FL +AG+KYGVGFW PGSGIIHQIILENYAFPGLL+IGTDSHTPNGGGLGGLCIGVG
Sbjct: 147 VFNFLATAGSKYGVGFWKPGSGIIHQIILENYAFPGLLLIGTDSHTPNGGGLGGLCIGVG 206

Query: 252 GADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHG 311
           GADAVDVMADIPWELKCPKVIG++LTG L GWTS+KDVILKVA ILTVKGGTGAI+    
Sbjct: 207 GADAVDVMADIPWELKCPKVIGIKLTGKLNGWTSAKDVILKVADILTVKGGTGAIV---- 262

Query: 312 PGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEI 371
                                              EY GPG+D+IS              
Sbjct: 263 -----------------------------------EYFGPGVDSISA------------- 274

Query: 372 GATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAK 431
                               TGMGTICNMGAEIGATTSVFPYN  MY +L+AT R++IA+
Sbjct: 275 --------------------TGMGTICNMGAEIGATTSVFPYNESMYKYLEATGRKEIAE 314

Query: 432 EAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDI 491
           EA KY+ LLT D+GA YDQ+IE++L+TL PHVNGPFTPDLA  I+KLGE AKKNGWP+D+
Sbjct: 315 EARKYKDLLTADDGANYDQIIEINLDTLTPHVNGPFTPDLASSIDKLGENAKKNGWPLDV 374

Query: 492 KVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLR 551
           KVSLIGSCTN+SYEDM+R ASIAK+A+  GLK+ T F +TPGSEQ+RATIERDG+++   
Sbjct: 375 KVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTITPGSEQVRATIERDGLSKIFA 434

Query: 552 EFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVT 611
           +FGG VLANACGPCIGQW+R+DVK GEKNTIV SYNRNFTGRNDANPATH FVTSP++ T
Sbjct: 435 DFGGMVLANACGPCIGQWDRQDVKKGEKNTIVTSYNRNFTGRNDANPATHGFVTSPDITT 494

Query: 612 ALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVD 671
           A+AI G L F+P +D LT +DG  FKL+ P G +LP KG+DPG DT+Q P   G    VD
Sbjct: 495 AMAISGRLDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAPSGSG---QVD 551

Query: 672 VDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNL 731
           V P S RLQLL PFD WD KD++DM +LIKV GKCTTDHISAAGPWLK+RGHLDNISNNL
Sbjct: 552 VSPSSDRLQLLSPFDKWDGKDLEDMKILIKVTGKCTTDHISAAGPWLKYRGHLDNISNNL 611

Query: 732 FLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALE 791
           FLTA NA+NGEMNKVKNQ+TG+YG V   AR YKA GV WVA+GDENYGEGSSREHAALE
Sbjct: 612 FLTAINADNGEMNKVKNQVTGEYGAVPATARKYKADGVRWVAIGDENYGEGSSREHAALE 671

Query: 792 PRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKP 851
           PRHLGGRAIIVKSFARIHETNLKKQG+LPLTFANP+DYDKI P+D +S+VGL   APGKP
Sbjct: 672 PRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANPADYDKIDPSDNVSIVGLSSFAPGKP 731

Query: 852 VTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
           +TA  K  +G   E+ LNH+ NEQQI WF+A
Sbjct: 732 LTAIFKKTNGSKVEVTLNHTFNEQQIEWFKA 762
Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.
Caenorhabditis elegans (taxid: 6239)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3
>sp|Q99KI0|ACON_MOUSE Aconitate hydratase, mitochondrial OS=Mus musculus GN=Aco2 PE=1 SV=1 Back     alignment and function description
>sp|P20004|ACON_BOVIN Aconitate hydratase, mitochondrial OS=Bos taurus GN=ACO2 PE=1 SV=4 Back     alignment and function description
>sp|Q9ER34|ACON_RAT Aconitate hydratase, mitochondrial OS=Rattus norvegicus GN=Aco2 PE=1 SV=2 Back     alignment and function description
>sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial OS=Homo sapiens GN=ACO2 PE=1 SV=2 Back     alignment and function description
>sp|P16276|ACON_PIG Aconitate hydratase, mitochondrial OS=Sus scrofa GN=ACO2 PE=1 SV=1 Back     alignment and function description
>sp|Q54XS2|ACON_DICDI Probable aconitate hydratase, mitochondrial OS=Dictyostelium discoideum GN=aco2 PE=3 SV=1 Back     alignment and function description
>sp|P49609|ACON_GRAGA Aconitate hydratase, mitochondrial OS=Gracilaria gracilis PE=3 SV=1 Back     alignment and function description
>sp|O13966|ACON_SCHPO Aconitate hydratase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9.06c PE=3 SV=2 Back     alignment and function description
>sp|P19414|ACON_YEAST Aconitate hydratase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACO1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1087
383859989788 PREDICTED: aconitate hydratase, mitochon 0.624 0.861 0.743 0.0
332018721839 Aconitate hydratase, mitochondrial [Acro 0.624 0.809 0.740 0.0
307185560853 Aconitate hydratase, mitochondrial [Camp 0.624 0.796 0.732 0.0
340724974788 PREDICTED: aconitate hydratase, mitochon 0.624 0.861 0.742 0.0
28971712788 hypothetical protein [Antheraea yamamai] 0.632 0.873 0.738 0.0
350416945788 PREDICTED: aconitate hydratase, mitochon 0.624 0.861 0.740 0.0
380022424788 PREDICTED: aconitate hydratase, mitochon 0.632 0.873 0.727 0.0
48098039788 PREDICTED: aconitate hydratase, mitochon 0.632 0.873 0.727 0.0
328716624789 PREDICTED: probable aconitate hydratase, 0.624 0.860 0.743 0.0
307201595775 Aconitate hydratase, mitochondrial [Harp 0.624 0.876 0.732 0.0
>gi|383859989|ref|XP_003705474.1| PREDICTED: aconitate hydratase, mitochondrial-like [Megachile rotundata] Back     alignment and taxonomy information
 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/752 (74%), Positives = 618/752 (82%), Gaps = 73/752 (9%)

Query: 132 RLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEE 191
           RLRPDRVAMQDATAQMAMLQFISSGLP+VAVPSTIHCDHLIEAQ+GG +DLKRAK  N+E
Sbjct: 95  RLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTIHCDHLIEAQIGGEQDLKRAKDINKE 154

Query: 192 VYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVG 251
           VY FL++AGAKYGVGFW+PGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLG LCIGVG
Sbjct: 155 VYNFLKTAGAKYGVGFWNPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGCLCIGVG 214

Query: 252 GADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHG 311
           GADAVDVMA+IPWELKCPKVIGV+LTG LKGWTS KDVILKVAGILTVKGGTGAI+    
Sbjct: 215 GADAVDVMANIPWELKCPKVIGVKLTGTLKGWTSPKDVILKVAGILTVKGGTGAIV---- 270

Query: 312 PGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEI 371
                                              EY GPG+D+IS              
Sbjct: 271 -----------------------------------EYFGPGVDSIS-------------- 281

Query: 372 GATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAK 431
                              CTGM TICNMGAEIGATTS+FPYN RM D+LKAT R++IA 
Sbjct: 282 -------------------CTGMATICNMGAEIGATTSIFPYNYRMQDYLKATNRKEIAG 322

Query: 432 EAMKY-QSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMD 490
            A ++ ++LLT D GAKYDQ+IELDL+TLEPHVNGPFTPDLAHPI+KLG+AAKKNGWP +
Sbjct: 323 AADQHKETLLTADSGAKYDQIIELDLSTLEPHVNGPFTPDLAHPISKLGDAAKKNGWPNE 382

Query: 491 IKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTL 550
           IKV LIGSCTN+SYEDM RCA+IAK+A+ HGLK+ + FNVTPGSEQIRATIERDGIA+ L
Sbjct: 383 IKVGLIGSCTNSSYEDMGRCANIAKQALEHGLKAKSAFNVTPGSEQIRATIERDGIAKIL 442

Query: 551 REFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELV 610
           R+FGGTVLANACGPCIGQW+RKD+K G+KNTIV SYNRNFTGRNDANPATHAFVTSPELV
Sbjct: 443 RDFGGTVLANACGPCIGQWDRKDIKKGDKNTIVTSYNRNFTGRNDANPATHAFVTSPELV 502

Query: 611 TALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSV 670
           TAL+I G L F+P SD L G DGK F L+DP+GDELP KGFDPG+DTY  PP DGS + V
Sbjct: 503 TALSIAGRLDFNPVSDKLKGKDGKEFLLKDPYGDELPNKGFDPGMDTYDAPPSDGSRVKV 562

Query: 671 DVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNN 730
           DV P S+RLQLLEPFD WD KD+ D+ VLIKVKGKCTTDHISAAGPWLK+RGHLDNISNN
Sbjct: 563 DVSPSSERLQLLEPFDKWDGKDLTDLTVLIKVKGKCTTDHISAAGPWLKYRGHLDNISNN 622

Query: 731 LFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAAL 790
           +F+ A N+ENGEMNKVKNQLT ++G V +VAR YK  GV WVAVGDENYGEGSSREHAAL
Sbjct: 623 MFIGAVNSENGEMNKVKNQLTNEWGKVPDVARHYKKNGVKWVAVGDENYGEGSSREHAAL 682

Query: 791 EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGK 850
           EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQP D+ISL+GLKDLAPGK
Sbjct: 683 EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPTDKISLLGLKDLAPGK 742

Query: 851 PVTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
           PV A+IKH DGKV+ I LNH+MNEQQI+WF+A
Sbjct: 743 PVKAEIKHKDGKVDTISLNHTMNEQQISWFKA 774

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332018721|gb|EGI59293.1| Aconitate hydratase, mitochondrial [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307185560|gb|EFN71522.1| Aconitate hydratase, mitochondrial [Camponotus floridanus] Back     alignment and taxonomy information
>gi|340724974|ref|XP_003400851.1| PREDICTED: aconitate hydratase, mitochondrial-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|28971712|dbj|BAC65324.1| hypothetical protein [Antheraea yamamai] Back     alignment and taxonomy information
>gi|350416945|ref|XP_003491181.1| PREDICTED: aconitate hydratase, mitochondrial-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380022424|ref|XP_003695046.1| PREDICTED: aconitate hydratase, mitochondrial-like [Apis florea] Back     alignment and taxonomy information
>gi|48098039|ref|XP_391994.1| PREDICTED: aconitate hydratase, mitochondrial-like [Apis mellifera] Back     alignment and taxonomy information
>gi|328716624|ref|XP_001947595.2| PREDICTED: probable aconitate hydratase, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307201595|gb|EFN81350.1| Aconitate hydratase, mitochondrial [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1087
FB|FBgn0010100787 Acon "Aconitase" [Drosophila m 0.468 0.646 0.742 9.6e-304
MGI|MGI:87880780 Aco2 "aconitase 2, mitochondri 0.469 0.653 0.696 4.5e-297
UNIPROTKB|E2RCY8781 ACO2 "Uncharacterized protein" 0.469 0.653 0.702 9.3e-297
RGD|621360780 Aco2 "aconitase 2, mitochondri 0.469 0.653 0.696 9.3e-297
UNIPROTKB|Q5ZMW1785 ACO2 "Uncharacterized protein" 0.469 0.649 0.698 6.5e-296
WB|WBGene00000041777 aco-2 [Caenorhabditis elegans 0.466 0.652 0.712 1.7e-295
FB|FBgn0037862783 CG4706 [Drosophila melanogaste 0.468 0.650 0.720 2.9e-293
DICTYBASE|DDB_G0278779771 aco2 "aconitase, mitochondrial 0.469 0.661 0.650 4.8e-271
ASPGD|ASPL0000027768783 acoA [Emericella nidulans (tax 0.467 0.648 0.650 1.4e-269
POMBASE|SPAC24C9.06c789 SPAC24C9.06c "aconitate hydrat 0.468 0.645 0.621 2.2e-264
FB|FBgn0010100 Acon "Aconitase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2041 (723.5 bits), Expect = 9.6e-304, Sum P(2) = 9.6e-304
 Identities = 380/512 (74%), Positives = 438/512 (85%)

Query:   372 GATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAK 431
             G T ++  Y+ +  +D+ISCTGM TICNMGAEIGATTS+FP+N RM D+LK+T R  IA 
Sbjct:   266 GGTGAIIEYHGK-GVDSISCTGMATICNMGAEIGATTSLFPFNQRMADYLKSTGRAGIAS 324

Query:   432 EAMKYQS-LLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMD 490
             EA KYQ+ +L+ D+  +YD+LIE++L+TLEPHVNGPFTPDL HPI+KLGE +KKNG+PMD
Sbjct:   325 EAQKYQAKILSADKNCEYDELIEINLDTLEPHVNGPFTPDLGHPISKLGENSKKNGYPMD 384

Query:   491 IKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTL 550
             I+V LIGSCTN+SYEDM RCASIAK+AM+HGLKS  PFNVTPGSEQIRATIERDGI++  
Sbjct:   385 IRVGLIGSCTNSSYEDMGRCASIAKDAMSHGLKSKIPFNVTPGSEQIRATIERDGISEVF 444

Query:   551 REFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELV 610
              +FGGTVLANACGPCIGQW+RKDVK G+KNTIV SYNRNFTGRNDANPATH FVTSPELV
Sbjct:   445 DKFGGTVLANACGPCIGQWDRKDVKKGDKNTIVTSYNRNFTGRNDANPATHCFVTSPELV 504

Query:   611 TALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSV 670
             TAL+I G L F+P +D LTG+DGK FKL+ PFGDELP KGFDPG DTY  PP  G ++ V
Sbjct:   505 TALSIAGRLDFNPLTDELTGADGKKFKLKAPFGDELPAKGFDPGQDTYTAPPPSGENVKV 564

Query:   671 DVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNN 730
              VDPKS RLQLLEPFD W+ +D+ D+ VLIKVKGKCTTDHISAAGPWLK+RGHLDNISNN
Sbjct:   565 AVDPKSTRLQLLEPFDKWNGQDLTDLTVLIKVKGKCTTDHISAAGPWLKYRGHLDNISNN 624

Query:   731 LFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAAL 790
             +F+ ATN EN EMN +KNQ  G +G V +VAR YKA G+ WVAVGDENYGEGSSREHAAL
Sbjct:   625 MFIGATNYENNEMNNIKNQRNGSWGGVPDVARDYKANGIKWVAVGDENYGEGSSREHAAL 684

Query:   791 EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGK 850
             EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANP+DYDKIQP  +ISL+ LK LAPGK
Sbjct:   685 EPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPADYDKIQPTSKISLLNLKSLAPGK 744

Query:   851 PVTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
             PV A+IK+ D KVE IKLNH++N+ QI WF+A
Sbjct:   745 PVDAEIKNGD-KVERIKLNHTLNDLQIGWFKA 775
GO:0005739 "mitochondrion" evidence=ISS;IDA;NAS
GO:0003994 "aconitate hydratase activity" evidence=ISS;NAS
GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA
GO:0006099 "tricarboxylic acid cycle" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
MGI|MGI:87880 Aco2 "aconitase 2, mitochondrial" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RCY8 ACO2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|621360 Aco2 "aconitase 2, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMW1 ACO2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00000041 aco-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0037862 CG4706 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0278779 aco2 "aconitase, mitochondrial" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000027768 acoA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPAC24C9.06c SPAC24C9.06c "aconitate hydratase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P34455ACON_CAEEL4, ., 2, ., 1, ., 30.69100.62180.8700yesN/A
P19414ACON_YEAST4, ., 2, ., 1, ., 30.59250.62370.8714yesN/A
P16276ACON_PIG4, ., 2, ., 1, ., 30.66970.63560.8847yesN/A
Q99798ACON_HUMAN4, ., 2, ., 1, ., 30.67230.63560.8858yesN/A
O13966ACON_SCHPO4, ., 2, ., 1, ., 30.60920.62090.8555yesN/A
Q9ER34ACON_RAT4, ., 2, ., 1, ., 30.67490.63560.8858yesN/A
P20004ACON_BOVIN4, ., 2, ., 1, ., 30.67230.63560.8858yesN/A
Q99KI0ACON_MOUSE4, ., 2, ., 1, ., 30.67620.63560.8858yesN/A
Q54XS2ACON_DICDI4, ., 2, ., 1, ., 30.61400.63840.9001yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.921
3rd Layer4.2.1.30.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1087
TIGR01340745 TIGR01340, aconitase_mito, aconitate hydratase, mi 0.0
PRK07229646 PRK07229, PRK07229, aconitate hydratase; Validated 0.0
cd01584412 cd01584, AcnA_Mitochondrial, Aconitase catalyzes t 0.0
COG1048861 COG1048, AcnA, Aconitase A [Energy production and 0.0
pfam00330464 pfam00330, Aconitase, Aconitase family (aconitate 0.0
cd01351389 cd01351, Aconitase, Aconitase catalytic domain; Ac 1e-131
TIGR01342658 TIGR01342, acon_putative, aconitate hydratase, put 1e-104
cd01578149 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi 1e-100
cd01585380 cd01585, AcnA_Bact, Aconitase catalyzes the revers 5e-97
PRK12881889 PRK12881, acnA, aconitate hydratase; Provisional 4e-75
PRK09277888 PRK09277, PRK09277, aconitate hydratase; Validated 4e-70
TIGR01341876 TIGR01341, aconitase_1, aconitate hydratase 1 8e-65
cd01583382 cd01583, IPMI, 3-isopropylmalate dehydratase catal 3e-64
COG0065423 COG0065, LeuC, 3-isopropylmalate dehydratase large 2e-61
PRK00402418 PRK00402, PRK00402, 3-isopropylmalate dehydratase 6e-61
PTZ00092898 PTZ00092, PTZ00092, aconitate hydratase-like prote 6e-60
pfam00694131 pfam00694, Aconitase_C, Aconitase C-terminal domai 2e-57
TIGR02086412 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas 6e-54
TIGR01343412 TIGR01343, hacA_fam, homoaconitate hydratase famil 1e-53
PLN00070936 PLN00070, PLN00070, aconitate hydratase 1e-51
cd01237110 cd01237, PH_fermitin, Fermitin family pleckstrin h 4e-51
TIGR02083419 TIGR02083, LEU2, 3-isopropylmalate dehydratase, la 2e-44
TIGR02333858 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh 5e-39
TIGR00139712 TIGR00139, h_aconitase, homoaconitase 6e-36
PRK12466471 PRK12466, PRK12466, isopropylmalate isomerase larg 2e-32
cd01579121 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik 2e-31
TIGR00170465 TIGR00170, leuC, 3-isopropylmalate dehydratase, la 6e-31
cd01586404 cd01586, AcnA_IRP, Aconitase A catalytic domain 9e-31
PRK05478466 PRK05478, PRK05478, isopropylmalate isomerase larg 6e-30
cd0040488 cd00404, Aconitase_swivel, Aconitase swivel domain 8e-25
PRK11413751 PRK11413, PRK11413, putative hydratase; Provisiona 1e-20
cd01582363 cd01582, Homoaconitase, Homoaconitase and other un 7e-20
cd01580171 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai 3e-19
cd01582363 cd01582, Homoaconitase, Homoaconitase and other un 4e-16
cd01586404 cd01586, AcnA_IRP, Aconitase A catalytic domain 4e-14
COG0066191 COG0066, LeuD, 3-isopropylmalate dehydratase small 4e-12
cd0157791 cd01577, IPMI_Swivel, Aconatase-like swivel domain 2e-11
PRK00439163 PRK00439, leuD, 3-isopropylmalate dehydratase smal 6e-10
cd01237110 cd01237, PH_fermitin, Fermitin family pleckstrin h 5e-09
smart00233102 smart00233, PH, Pleckstrin homology domain 7e-09
PRK14023166 PRK14023, PRK14023, homoaconitate hydratase small 1e-08
COG1049852 COG1049, AcnB, Aconitase B [Energy production and 8e-08
pfam00169101 pfam00169, PH, PH domain 8e-08
TIGR02087154 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratas 1e-07
TIGR00117844 TIGR00117, acnB, aconitate hydratase 2 7e-07
cd0082192 cd00821, PH, Pleckstrin homology (PH) domain 8e-07
PRK01641200 PRK01641, leuD, isopropylmalate isomerase small su 1e-06
PRK09238835 PRK09238, PRK09238, bifunctional aconitate hydrata 4e-06
cd01581436 cd01581, AcnB, Aconitate hydratase B catalyses the 7e-06
TIGR02084156 TIGR02084, leud, 3-isopropylmalate dehydratase, sm 1e-05
TIGR00171188 TIGR00171, leuD, 3-isopropylmalate dehydratase, sm 1e-04
PRK11413751 PRK11413, PRK11413, putative hydratase; Provisiona 5e-04
PLN00094938 PLN00094, PLN00094, aconitate hydratase 2; Provisi 7e-04
PLN00072246 PLN00072, PLN00072, 3-isopropylmalate isomerase/de 0.001
cd13301108 cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin 0.002
cd13307101 cd13307, PH2_AFAP, Actin filament associated prote 0.002
>gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial Back     alignment and domain information 
 Score = 1148 bits (2970), Expect = 0.0
 Identities = 447/759 (58%), Positives = 542/759 (71%), Gaps = 81/759 (10%)

Query: 132 RLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEE 191
           +LRPDRVAMQDA+AQMA+LQF++ GLP+VAVP++IHCDHLI  Q GG +DL RA + N+E
Sbjct: 53  KLRPDRVAMQDASAQMALLQFMTCGLPQVAVPASIHCDHLIVGQKGGDKDLARAIATNKE 112

Query: 192 VYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVG 251
           V+ FL SAG KYG+GFW PGSGIIHQI+LENYAFPGL+M+GTDSHTPN GGLG + IGVG
Sbjct: 113 VFDFLESAGKKYGIGFWKPGSGIIHQIVLENYAFPGLMMLGTDSHTPNAGGLGTIAIGVG 172

Query: 252 GADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHG 311
           GADAVD +A  PWELK PK++GV+LTG L GWTS KD+ILK+AG+LTV+GGTG I+E   
Sbjct: 173 GADAVDALAGAPWELKAPKILGVKLTGKLNGWTSPKDIILKLAGLLTVRGGTGYIVE--- 229

Query: 312 PGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEI 371
                                               Y GPG++++SCTGM TICNMGAEI
Sbjct: 230 ------------------------------------YFGPGVESLSCTGMATICNMGAEI 253

Query: 372 GATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAK 431
           GATTS+FP+N+                                  M  +LKAT R  IA+
Sbjct: 254 GATTSIFPFNEA---------------------------------MSRYLKATNRAQIAE 280

Query: 432 EA--MKYQ-SLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWP 488
           +A   +Y    L  DEGA+YD+LIE+DL+ LEPH+NGPFTPDL+ PI+K  E  +KNGWP
Sbjct: 281 DAKTGQYSFFKLKADEGAQYDELIEIDLSKLEPHINGPFTPDLSTPISKFKETVQKNGWP 340

Query: 489 MDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQ 548
             +   LIGSCTN+SYEDMSRCASI K+A   GLK  +PF VTPGSEQIRAT+ERDGI Q
Sbjct: 341 EKLSAGLIGSCTNSSYEDMSRCASIVKDAEQAGLKPKSPFYVTPGSEQIRATLERDGILQ 400

Query: 549 TLREFGGTVLANACGPCIGQWNRKD-VKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSP 607
           T  +FGG VLANACGPCIGQW+RKD VK GE NTI+ SYNRNF GRND NPAT  F+ SP
Sbjct: 401 TFEKFGGIVLANACGPCIGQWDRKDDVKKGEPNTILTSYNRNFRGRNDGNPATMNFLASP 460

Query: 608 ELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKD-GS 666
           E+VTA++  G+L F+P +D+LT  DGK FK   P GDELP KGF+ G DT+Q PP     
Sbjct: 461 EIVTAMSYAGSLTFNPLTDSLTTPDGKEFKFPAPKGDELPEKGFEAGRDTFQAPPGSPNP 520

Query: 667 SLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDN 726
           ++ V V P S RLQLLEPF+ W+ KD+  + VLIKV GKCTTDHISAAGPWLK++GHLDN
Sbjct: 521 NVEVAVSPSSDRLQLLEPFEPWNGKDLSGLRVLIKVTGKCTTDHISAAGPWLKYKGHLDN 580

Query: 727 ISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSRE 786
           ISNN  + A NAE GE+NK  + L G  G + E+AR +KA G PWV V + NYGEGS+RE
Sbjct: 581 ISNNTLIGAVNAETGEVNKAYD-LDGSKGTIPELARDWKARGQPWVVVAEHNYGEGSARE 639

Query: 787 HAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDL 846
           HAALEPRHLGGR II KSFARIHETNLKKQG+LPLTFAN +DYDKIQP D ++ + L ++
Sbjct: 640 HAALEPRHLGGRIIITKSFARIHETNLKKQGVLPLTFANEADYDKIQPGDEVATLNLYEM 699

Query: 847 AP---GKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
                G  V  ++   +GKV EIKL H++++ QI +F+A
Sbjct: 700 LKNGGGGEVDLRVTKKNGKVFEIKLKHTVSKDQIGFFKA 738

This model represents mitochondrial forms of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase [Energy metabolism, TCA cycle]. Length = 745
>gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated Back     alignment and domain information
>gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) Back     alignment and domain information
>gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type Back     alignment and domain information
>gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain Back     alignment and domain information
>gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated Back     alignment and domain information
>gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 Back     alignment and domain information
>gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate Back     alignment and domain information
>gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed Back     alignment and domain information
>gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain Back     alignment and domain information
>gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein Back     alignment and domain information
>gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase Back     alignment and domain information
>gnl|CDD|241270 cd01237, PH_fermitin, Fermitin family pleckstrin homology (PH) domain Back     alignment and domain information
>gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent Back     alignment and domain information
>gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase Back     alignment and domain information
>gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional Back     alignment and domain information
>gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain Back     alignment and domain information
>gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain Back     alignment and domain information
>gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated Back     alignment and domain information
>gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain Back     alignment and domain information
>gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional Back     alignment and domain information
>gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family Back     alignment and domain information
>gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain Back     alignment and domain information
>gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family Back     alignment and domain information
>gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain Back     alignment and domain information
>gnl|CDD|223144 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238809 cd01577, IPMI_Swivel, Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins Back     alignment and domain information
>gnl|CDD|234762 PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed Back     alignment and domain information
>gnl|CDD|241270 cd01237, PH_fermitin, Fermitin family pleckstrin homology (PH) domain Back     alignment and domain information
>gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain Back     alignment and domain information
>gnl|CDD|184460 PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215766 pfam00169, PH, PH domain Back     alignment and domain information
>gnl|CDD|233716 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 Back     alignment and domain information
>gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain Back     alignment and domain information
>gnl|CDD|179314 PRK01641, leuD, isopropylmalate isomerase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|131139 TIGR02084, leud, 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>gnl|CDD|129275 TIGR00171, leuD, 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional Back     alignment and domain information
>gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional Back     alignment and domain information
>gnl|CDD|177701 PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|241455 cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin homology (PH) domain, repeat 1 Back     alignment and domain information
>gnl|CDD|241461 cd13307, PH2_AFAP, Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1087
KOG0453|consensus778 100.0
TIGR01340745 aconitase_mito aconitate hydratase, mitochondrial. 100.0
PRK09277888 aconitate hydratase; Validated 100.0
TIGR01341876 aconitase_1 aconitate hydratase 1. This model repr 100.0
TIGR02333858 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe 100.0
PRK12881889 acnA aconitate hydratase; Provisional 100.0
PTZ00092898 aconitate hydratase-like protein; Provisional 100.0
PLN00070936 aconitate hydratase 100.0
COG1048861 AcnA Aconitase A [Energy production and conversion 100.0
PRK07229646 aconitate hydratase; Validated 100.0
TIGR01342658 acon_putative aconitate hydratase, putative, Aquif 100.0
PRK11413751 putative hydratase; Provisional 100.0
TIGR00139712 h_aconitase homoaconitase. Homoaconitase, aconitas 100.0
KOG0452|consensus892 100.0
cd01584412 AcnA_Mitochondrial Aconitase catalyzes the reversi 100.0
COG1049852 AcnB Aconitase B [Energy production and conversion 100.0
TIGR00117844 acnB aconitate hydratase 2. Aconitate hydratase (a 100.0
PRK09238835 bifunctional aconitate hydratase 2/2-methylisocitr 100.0
PLN00094938 aconitate hydratase 2; Provisional 100.0
TIGR01343412 hacA_fam homoaconitate hydratase family protein. T 100.0
PRK00402418 3-isopropylmalate dehydratase large subunit; Revie 100.0
TIGR02083419 LEU2 3-isopropylmalate dehydratase, large subunit. 100.0
TIGR02086412 IPMI_arch 3-isopropylmalate dehydratase, large sub 100.0
COG0065423 LeuC 3-isopropylmalate dehydratase large subunit [ 100.0
PRK12466471 isopropylmalate isomerase large subunit; Provision 100.0
PRK05478466 isopropylmalate isomerase large subunit; Validated 100.0
TIGR00170465 leuC 3-isopropylmalate dehydratase, large subunit. 100.0
cd01585380 AcnA_Bact Aconitase catalyzes the reversible isome 100.0
cd01583382 IPMI 3-isopropylmalate dehydratase catalyzes the i 100.0
PF00330465 Aconitase: Aconitase family (aconitate hydratase); 100.0
cd01581436 AcnB Aconitate hydratase B catalyses the formation 100.0
cd01582363 Homoaconitase Homoaconitase and other uncharacteri 100.0
cd01586404 AcnA_IRP Aconitase A catalytic domain. Aconitase A 100.0
cd01351389 Aconitase Aconitase catalytic domain; Aconitase ca 100.0
KOG3727|consensus 664 100.0
cd01578149 AcnA_Mitochon_Swivel Mitochondrial aconitase A swi 100.0
cd01237106 Unc112 Unc-112 pleckstrin homology (PH) domain. Un 100.0
KOG0454|consensus502 100.0
cd01580171 AcnA_IRP_Swivel Aconitase A swivel domain. This is 100.0
TIGR02084156 leud 3-isopropylmalate dehydratase, small subunit. 99.97
PRK00439163 leuD 3-isopropylmalate dehydratase small subunit; 99.97
PRK14023166 homoaconitate hydratase small subunit; Provisional 99.97
TIGR02087154 LEUD_arch 3-isopropylmalate dehydratase, small sub 99.97
cd01579121 AcnA_Bact_Swivel Bacterial Aconitase-like swivel d 99.97
PLN00072246 3-isopropylmalate isomerase/dehydratase small subu 99.96
COG0066191 LeuD 3-isopropylmalate dehydratase small subunit [ 99.95
cd0040488 Aconitase_swivel Aconitase swivel domain. Aconitas 99.94
TIGR00171188 leuD 3-isopropylmalate dehydratase, small subunit. 99.94
PRK01641200 leuD isopropylmalate isomerase small subunit; Prov 99.93
PF00694131 Aconitase_C: Aconitase C-terminal domain CAUTION: 99.93
cd0157791 IPMI_Swivel Aconatase-like swivel domain of 3-isop 99.92
cd01674129 Homoaconitase_Swivel Homoaconitase swivel domain. 99.91
PRK09238 835 bifunctional aconitate hydratase 2/2-methylisocitr 99.9
KOG0454|consensus502 99.88
cd01576131 AcnB_Swivel Aconitase B swivel domain. Aconitate h 99.87
TIGR00117 844 acnB aconitate hydratase 2. Aconitate hydratase (a 99.83
PLN00094 938 aconitate hydratase 2; Provisional 99.68
PRK14812119 hypothetical protein; Provisional 99.63
KOG3727|consensus 664 99.62
PF06434204 Aconitase_2_N: Aconitate hydratase 2 N-terminus; I 99.35
PF00169104 PH: PH domain; InterPro: IPR001849 The pleckstrin 98.99
cd0126096 PH_CNK Connector enhancer of KSR (Kinase suppresso 98.77
cd0124691 PH_oxysterol_bp Oxysterol binding protein (OSBP) P 98.63
cd01252125 PH_cytohesin Cytohesin Pleckstrin homology (PH) do 98.52
cd01253104 PH_beta_spectrin Beta-spectrin pleckstrin homology 98.44
smart00233102 PH Pleckstrin homology domain. Domain commonly fou 98.42
cd01238106 PH_Tec Tec pleckstrin homology (PH) domain. Tec pl 98.42
cd0124791 PH_GPBP Goodpasture antigen binding protein (GPBP) 98.41
cd0126595 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain 98.4
cd0125094 PH_centaurin Centaurin Pleckstrin homology (PH) do 98.37
cd01233100 Unc104 Unc-104 pleckstrin homology (PH) domain. Un 98.36
PF06434204 Aconitase_2_N: Aconitate hydratase 2 N-terminus; I 98.24
cd01263122 PH_anillin Anillin Pleckstrin homology (PH) domain 98.21
cd01251103 PH_centaurin_alpha Centaurin alpha Pleckstrin homo 98.19
cd0090099 PH-like Pleckstrin homology-like domain. Pleckstri 98.19
cd0082196 PH Pleckstrin homology (PH) domain. Pleckstrin hom 98.12
cd01257101 PH_IRS Insulin receptor substrate (IRS) pleckstrin 98.07
cd01266108 PH_Gab Gab (Grb2-associated binder) pleckstrin hom 98.02
cd01235101 PH_SETbf Set binding factor Pleckstrin Homology (P 97.94
cd0124498 PH_RasGAP_CG9209 RAS_GTPase activating protein (GA 97.74
KOG0453|consensus778 97.64
cd01236104 PH_outspread Outspread Pleckstrin homology (PH) do 97.55
cd0124598 PH_RasGAP_CG5898 RAS GTPase-activating protein (GA 97.48
PF15410119 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN 97.39
cd01230117 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 97.33
cd01254121 PH_PLD Phospholipase D (PLD) pleckstrin homology ( 97.25
cd01241102 PH_Akt Akt pleckstrin homology (PH) domain. Akt pl 97.21
PF1540989 PH_8: Pleckstrin homology domain 97.18
cd01256110 PH_dynamin Dynamin pleckstrin homology (PH) domain 97.1
cd01264101 PH_melted Melted pleckstrin homology (PH) domain. 96.98
COG1049 852 AcnB Aconitase B [Energy production and conversion 96.39
PF15413112 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE 96.13
cd01237106 Unc112 Unc-112 pleckstrin homology (PH) domain. Un 96.04
cd01219101 PH_FGD FGD (faciogenital dysplasia protein) plecks 95.59
PF04412400 DUF521: Protein of unknown function (DUF521); Inte 95.54
cd0122099 PH_CDEP Chondrocyte-derived ezrin-like domain cont 95.21
cd01242112 PH_ROK Rok (Rho- associated kinase) pleckstrin hom 94.72
COG1679403 Predicted aconitase [General function prediction o 93.5
cd01259114 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr 93.32
cd01243122 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin 92.31
KOG3640|consensus1116 91.37
cd01355389 AcnX Putative Aconitase X catalytic domain. Putati 89.96
KOG3751|consensus 622 89.14
cd01221125 PH_ephexin Ephexin Pleckstrin homology (PH) domain 86.86
>KOG0453|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.9e-185  Score=1553.62  Aligned_cols=737  Identities=70%  Similarity=1.145  Sum_probs=715.7

Q ss_pred             CCCCcHHHhhhccccccchhhHHHhhCCCcccccccCChhHHHHHHHHHhhhcCCCCchhhhccccccCCCceecccccc
Q psy3833          59 PSSPCKEARAKLVKPKSLVEKARLNVATEKSLYLSSLNKEEQYASWMAACRLASKGRTLADSSYEAEQTGPHSRLRPDRV  138 (1087)
Q Consensus        59 ~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~l~~~~~~~eeq~a~wmaA~~la~kGkTLAdKg~E~VrpGe~V~l~~d~v  138 (1087)
                      |+.+++....+|-+.|+.+++.+++|. ||++|.|++++++|                      +.+|.++|+.++||||
T Consensus        36 ~~i~y~~l~~~~~~v~k~l~~~p~tl~-EKIlyshl~~p~~~----------------------~i~Rg~~Yl~lrPdrv   92 (778)
T KOG0453|consen   36 PSIPYKKLLTRLFIVKKRLNKPPLTLT-EKILYSHLDNPPEQ----------------------KIVRGGSYLKLRPDRV   92 (778)
T ss_pred             cCCcHHHhhhhHHHHHHHhcCCCchhh-HHHHHhhccCCccc----------------------ceecccceEEEcccce
Confidence            456777777788888888999899998 99999998876543                      4589999999999999


Q ss_pred             ccccchhhHHHHHHHHcCCCcccCCceeeecccccccCCCchhHHHHhhhhHHHHHHHHHHHHhcCceecCCCCcceeee
Q psy3833         139 AMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQI  218 (1087)
Q Consensus       139 ~~qD~Tg~~a~~~~~~~g~~~v~~p~~~~~DH~v~a~~~~~~d~~~~~~~n~e~~~fl~~~~~~~Gi~~~~pG~GIiHqv  218 (1087)
                      +|||+|++||++||+..|++++++|+.+||||+|.++.+++.|++++...|+|+|+||.++|++|||.||+||+|||||+
T Consensus        93 a~qDasaqma~LqFms~Gl~kvavPstIhCdhli~a~~gg~~Dl~~a~~~Nkevydfl~saakkygi~Fw~pGsGIiHQI  172 (778)
T KOG0453|consen   93 AMQDASAQMALLQFMSSGLKKVAVPSTIHCDHLIEAQVGGDKDLQRASDLNKEVYDFLESAAKKYGIGFWKPGSGIIHQI  172 (778)
T ss_pred             ecccchhhHHHHHHHhcCcccccCCceEEecceeeeccCCcchhhhhhhhhHHHHHHHHHHHHhcCCCccCCCCceeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCeEecCCCCccCccccceeeccccHHHHHHHHhcCceEeecCcEEEEEEECcCCCCcchhHHHHHHHHHhc
Q psy3833         219 ILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILT  298 (1087)
Q Consensus       219 ~lE~~~~Pg~~~vGtDSHT~~~GglGala~GvG~~d~a~~ma~g~~~l~vPe~V~V~l~G~l~~gVt~kDviL~i~g~L~  298 (1087)
                      ++|+|++||.+++||||||+++||||+|++|||++|++++|+++||+|++|++++|+|+|+|+.|+|+|||||+++|.|+
T Consensus       173 vlEnYAfPG~m~igTDSHTpn~GGLG~l~igVggaDAvdvmA~~pWelk~PkvigV~LtG~l~gwtSpKDvIlklagilt  252 (778)
T KOG0453|consen  173 VLENYAFPGLMMIGTDSHTPNAGGLGCLAIGVGGADAVDVMATQPWELKCPKVIGVKLTGQLPGWTSPKDVILKLAGILT  252 (778)
T ss_pred             eeecccCCcceEEeccCCCCCCCccceeeeccccchHHHHhcCCCceecCCceEEEEEeeecCCCCChhHHHHhhhceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccEEEEEeCCcccccCccccccccccccccccccccccccchhhcccCCCccccccCCCccccccccccccccccc
Q psy3833         299 VKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVF  378 (1087)
Q Consensus       299 ~~G~~g~ivEf~G~gv~~LSv~~R~Ti~NMs~E~~A~~~~~~~~~~v~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (1087)
                      ++|++|+||||+||||.+|||+.|+|||||                                                  
T Consensus       253 vkggtg~iiEy~G~Gv~slSctgm~TIcNM--------------------------------------------------  282 (778)
T KOG0453|consen  253 VKGGTGHIIEYFGPGVNSLSCTGMATICNM--------------------------------------------------  282 (778)
T ss_pred             ecCccceeEEEecCccceeccccceeeccc--------------------------------------------------
Confidence            999999999999999999999999999999                                                  


Q ss_pred             cccccccccccccCCCCcccccccccCceeecccCcHHHHHHHHhcCChHHHHHHHHhhc-cCCCCCCCcccEEEEEeCC
Q psy3833         379 PYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQS-LLTPDEGAKYDQLIELDLN  457 (1087)
Q Consensus       379 ~~~~~~~i~~~~~~~~~~~~~m~~E~GAt~~if~~d~~t~~yL~~~~r~~~~~~~~~~~~-~l~aD~dA~Y~~vieiDLs  457 (1087)
                                            ++|.|||+|+||++++|.+||+.++|.++.+.+.++.. ++.||++|.||++||||||
T Consensus       283 ----------------------gaEiGAtTs~FP~n~~m~~yL~atgr~~ia~~a~~~~~~~l~AD~~a~Ydk~ieIdLs  340 (778)
T KOG0453|consen  283 ----------------------GAEIGATTSLFPYNERMIDYLQATGRNEIAREARETLDAILAADKGAHYDKIIEIDLS  340 (778)
T ss_pred             ----------------------cccccccccccCCCHHHHHHHHHhCcccchhhhHHhhhhcccCCCCCCcceEEEEEhh
Confidence                                  78889999999999999999999999998888877554 7899999999999999999


Q ss_pred             CCccccccCCCCCccccccccchhhhhCCCccceeEEEEeccCCCChHHHHHHHHHHHHhHhCCCCCCCCEEEecCcHHH
Q psy3833         458 TLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQI  537 (1087)
Q Consensus       458 ~ieP~vA~P~~Pd~v~~lse~~~~~~~~g~~~~Id~vfIGSCTn~~~~dl~aAA~ilk~a~~~~~~~~v~~~v~PgS~~v  537 (1087)
                      +|||+|++|++||...|++++.+.++++|||++|..++||||||+||+||..||.|+++|..+|+++++.|.|+|||.+|
T Consensus       341 tL~P~vnGPfTpdl~~pvskl~e~~~kn~wp~~i~~gligSCTNSsyeDm~raa~iv~~a~~~glk~~v~F~VtpgSeqi  420 (778)
T KOG0453|consen  341 TLEPHVNGPFTPDLSTPVSKLGENSEKNGWPIKIKVGLIGSCTNSSYEDMSRAADIVKQAKGKGLKPKVPFYVTPGSEQI  420 (778)
T ss_pred             hcccccCCCCCccccChHHHHhHHhhhcCCceeeeeeEEEeecCccHHHHHHHHHHHHHHHhcCCCCCcceEeccChHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcChHHHHHhcCcEEecCCccccccCCCcccccCCcceeEEeecCCCCCCCCCCCCCcceeecCHHHHHHHHHhC
Q psy3833         538 RATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKG  617 (1087)
Q Consensus       538 ~~~l~~~G~~~~l~~aGa~i~~pGCg~CiG~~~~~~v~~g~~~~~vsT~NRNF~gR~G~~p~~~~yLaSp~lvAAsAiaG  617 (1087)
                      ++.++|+|++++|.++|+++++++||||||+|.|.+|++||.+++|||+||||.||||++|.++.||+||++|+|+||+|
T Consensus       421 rAtierdG~~e~l~~~G~~vLanaCGPCIGqw~r~dvk~GE~ntivts~NRNFtgRnd~np~t~afltSP~iVtA~aiaG  500 (778)
T KOG0453|consen  421 RATIERDGIWETLEKAGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPATHAFLTSPEIVTALAIAG  500 (778)
T ss_pred             hhhHhhcchHHHHHhcCCEEcccCcCCcccccccccccCCCcCceeeeecccccccCCCCcchhhcccCHHHHHHHHHhc
Confidence            99999999999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCeeecCCCCCCCCCCCcCCCCccccCCCCCCCCceEecCCCCccccCCCCCCCCcccccccce
Q psy3833         618 TLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMV  697 (1087)
Q Consensus       618 ~I~fdp~~d~L~~~dG~~v~l~dP~~~eip~~~~~~~~~~~~~~~~~~~~v~~~~~p~S~~l~~l~pf~~~~~~~i~~ar  697 (1087)
                      ++.|+|+++.|+++||+.|+|++|.++++|+.+|+++.+.|+.|+.+.+.+++.++|.|+|++.|+||++|.++|++++.
T Consensus       501 ~l~fnp~td~l~~~dg~~fk~~~p~g~~lp~~g~d~g~~ty~ap~~~~~~~~v~v~p~s~rlqlLepF~~w~gkd~edl~  580 (778)
T KOG0453|consen  501 DLSFNPETDSLTAPDGKAFKLEPPIGDELPKKGFDPGQDTYQAPPSSSSVVEVDVDPTSDRLQLLEPFDKWDGKDLEDLK  580 (778)
T ss_pred             cccCCCcccccccCCcccccccCCcCCCCcccccCCCcccccCCCCCCCcceeecCCcccchhhcCCCCcccccccccce
Confidence            99999999999999999999999999999999999999999999888888999999999999999999999999999999


Q ss_pred             eeeeecCccccccccCCCCcccccCccccccccccccccccccCcccceEeecCCCcCChHHHHHHHHHcCCCcEEecCC
Q psy3833         698 VLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDE  777 (1087)
Q Consensus       698 vLl~~gd~iTTDhIsPAG~~L~~rg~~~~i~~~~l~~~~n~~~g~~~~~~~~~~G~~~~ipd~A~~yk~~g~~~IVVAG~  777 (1087)
                      ||+++.++|||||||.||+||+||||++|+++|+|+|+.|.++++.|.++|+.+|+|..+|+.++.|++.|++||+|+++
T Consensus       581 ilikv~gkCttDhIsaaGpwlkY~Ghl~nisnn~~igain~En~e~n~~~n~~~ge~~~vp~~~~~yk~~g~~wvvv~~~  660 (778)
T KOG0453|consen  581 ILIKVKGKCTTDHISAAGPWLKYRGHLENISNNDLIGAINKENGEANCVKNYLTGEFGTVPDTARDYKKHGIRWVVVGDE  660 (778)
T ss_pred             EEEEEecccCccccccCCcceeccchhhhcccchhhhhcchhhhhhhhhhhccccccCCcCchhhhHHhcCceeEEEccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCccchhhccccccccceEEEEechhHHHhhhhccCccceEEecCCCCcccCCCCCEEEEccccCcCCCCcEEEEEE
Q psy3833         778 NYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIK  857 (1087)
Q Consensus       778 nyG~GSSRE~Aa~~~r~lGv~aVIA~SFarI~~~Nlin~GllpL~f~~~~~~~~l~~gD~i~I~~l~~l~pg~~v~v~v~  857 (1087)
                      |||.||||||||.+||.+|+++||.+||+|||++|++++|||||+|.++++|++|+..|.+++.++.++.||+++++.|+
T Consensus       661 NyGeGSsREhAAlepr~lGg~~ii~kSFarIhetNlkkqglLpLtfanpadydKi~~~d~~~~~~L~~~~~gkp~t~~vt  740 (778)
T KOG0453|consen  661 NYGEGSSREHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFANPADYDKIRPADKVSIKGLTRRTPGKPLTVVVT  740 (778)
T ss_pred             ccCCCcchhhhhhchhhcCCcEEEeehhHHHHHhhhhhcceeeeeccCHHHhhhcChhcccchhhhhhhcCCCceeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCeEEEEEEEecCCHHHHHHHHhCCCCCchh
Q psy3833         858 HADGKVEEIKLNHSMNEQQITWFQAELPTRIPA  890 (1087)
Q Consensus       858 ~~dG~~~~~~l~~~lt~~E~e~~~aGGiLn~sr  890 (1087)
                      +.||+.+++.+.|.+++.|++||++|+.||+.+
T Consensus       741 ~~dg~~~~~kl~ht~n~~Qi~~fkaGsaln~~~  773 (778)
T KOG0453|consen  741 KKDGKEVEIKLNHTGNKLQIEWFKAGSALNVMK  773 (778)
T ss_pred             CCCCcEEEEecccccchhhhHhhhcchHHHHHH
Confidence            999999999999999999999999999998754

>TIGR01340 aconitase_mito aconitate hydratase, mitochondrial Back     alignment and domain information
>PRK09277 aconitate hydratase; Validated Back     alignment and domain information
>TIGR01341 aconitase_1 aconitate hydratase 1 Back     alignment and domain information
>TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent Back     alignment and domain information
>PRK12881 acnA aconitate hydratase; Provisional Back     alignment and domain information
>PTZ00092 aconitate hydratase-like protein; Provisional Back     alignment and domain information
>PLN00070 aconitate hydratase Back     alignment and domain information
>COG1048 AcnA Aconitase A [Energy production and conversion] Back     alignment and domain information
>PRK07229 aconitate hydratase; Validated Back     alignment and domain information
>TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type Back     alignment and domain information
>PRK11413 putative hydratase; Provisional Back     alignment and domain information
>TIGR00139 h_aconitase homoaconitase Back     alignment and domain information
>KOG0452|consensus Back     alignment and domain information
>cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>COG1049 AcnB Aconitase B [Energy production and conversion] Back     alignment and domain information
>TIGR00117 acnB aconitate hydratase 2 Back     alignment and domain information
>PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>PLN00094 aconitate hydratase 2; Provisional Back     alignment and domain information
>TIGR01343 hacA_fam homoaconitate hydratase family protein Back     alignment and domain information
>PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed Back     alignment and domain information
>TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12466 isopropylmalate isomerase large subunit; Provisional Back     alignment and domain information
>PRK05478 isopropylmalate isomerase large subunit; Validated Back     alignment and domain information
>TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate Back     alignment and domain information
>PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 Back     alignment and domain information
>cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle Back     alignment and domain information
>cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family Back     alignment and domain information
>cd01586 AcnA_IRP Aconitase A catalytic domain Back     alignment and domain information
>cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>KOG3727|consensus Back     alignment and domain information
>cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain Back     alignment and domain information
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain Back     alignment and domain information
>KOG0454|consensus Back     alignment and domain information
>cd01580 AcnA_IRP_Swivel Aconitase A swivel domain Back     alignment and domain information
>TIGR02084 leud 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed Back     alignment and domain information
>PRK14023 homoaconitate hydratase small subunit; Provisional Back     alignment and domain information
>TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain Back     alignment and domain information
>PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional Back     alignment and domain information
>COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] Back     alignment and domain information
>cd00404 Aconitase_swivel Aconitase swivel domain Back     alignment and domain information
>TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>PRK01641 leuD isopropylmalate isomerase small subunit; Provisional Back     alignment and domain information
>PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain Back     alignment and domain information
>cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins Back     alignment and domain information
>cd01674 Homoaconitase_Swivel Homoaconitase swivel domain Back     alignment and domain information
>PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>KOG0454|consensus Back     alignment and domain information
>cd01576 AcnB_Swivel Aconitase B swivel domain Back     alignment and domain information
>TIGR00117 acnB aconitate hydratase 2 Back     alignment and domain information
>PLN00094 aconitate hydratase 2; Provisional Back     alignment and domain information
>PRK14812 hypothetical protein; Provisional Back     alignment and domain information
>KOG3727|consensus Back     alignment and domain information
>PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 Back     alignment and domain information
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] Back     alignment and domain information
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain Back     alignment and domain information
>smart00233 PH Pleckstrin homology domain Back     alignment and domain information
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain Back     alignment and domain information
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain Back     alignment and domain information
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain Back     alignment and domain information
>PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 Back     alignment and domain information
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain Back     alignment and domain information
>cd00900 PH-like Pleckstrin homology-like domain Back     alignment and domain information
>cd00821 PH Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain Back     alignment and domain information
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain Back     alignment and domain information
>KOG0453|consensus Back     alignment and domain information
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain Back     alignment and domain information
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A Back     alignment and domain information
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain Back     alignment and domain information
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain Back     alignment and domain information
>PF15409 PH_8: Pleckstrin homology domain Back     alignment and domain information
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain Back     alignment and domain information
>cd01264 PH_melted Melted pleckstrin homology (PH) domain Back     alignment and domain information
>COG1049 AcnB Aconitase B [Energy production and conversion] Back     alignment and domain information
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C Back     alignment and domain information
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain Back     alignment and domain information
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain Back     alignment and domain information
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins Back     alignment and domain information
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain Back     alignment and domain information
>COG1679 Predicted aconitase [General function prediction only] Back     alignment and domain information
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain Back     alignment and domain information
>KOG3640|consensus Back     alignment and domain information
>cd01355 AcnX Putative Aconitase X catalytic domain Back     alignment and domain information
>KOG3751|consensus Back     alignment and domain information
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1087
1aco_A754 Crystal Structure Of Aconitase With Transaconitate 0.0
1ami_A754 Steric And Conformational Features Of The Aconitase 0.0
1nis_A754 Crystal Structure Of Aconitase With Trans-Aconitate 0.0
5acn_A754 Structure Of Activated Aconitase. Formation Of The 0.0
1b0j_A754 Crystal Structure Of Aconitase With Isocitrate Leng 0.0
1c97_A753 S642a:isocitrate Complex Of Aconitase Length = 753 0.0
1b0m_A753 Aconitase R644q:fluorocitrate Complex Length = 753 0.0
1c96_A753 S642a:citrate Complex Of Aconitase Length = 753 0.0
2b3x_A888 Structure Of An Orthorhombic Crystal Form Of Human 4e-41
3snp_A908 Crystal Structure Analysis Of Iron Regulatory Prote 2e-36
4f7h_A173 The Crystal Structure Of Kindlin-2 Pleckstrin Homol 8e-34
2lko_A138 Structural Basis Of Phosphoinositide Binding To Kin 2e-31
2ys3_A137 Solution Structure Of The Ph Domain Of Kindlin-3 Fr 6e-29
4bbk_A165 Structural And Functional Characterisation Of The K 6e-27
2pkp_A170 Crystal Structure Of 3-Isopropylmalate Dehydratase 9e-06
3q3w_A203 Isopropylmalate Isomerase Small Subunit From Campyl 3e-04
2hcu_A213 Crystal Structure Of Smu.1381 (Or Leud) From Strept 4e-04
>pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 Back     alignment and structure 
Iteration: 1

 Score = 1026 bits (2652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/763 (65%), Positives = 572/763 (74%), Gaps = 72/763 (9%)
Query: 120 SSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGV 179
           ++ E E+   + RLRPDRVAMQDATAQMAMLQFISSGLP+VAVPSTIHCDHLIEAQ+GG 
Sbjct: 51  ANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTIHCDHLIEAQLGGE 110
Query: 180 EDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPN 239
           +DL+RAK  N+EVY FL +AGAKYGVGFW PGSGIIHQIILENYA+PG+L+IGTDSHTPN
Sbjct: 111 KDLRRAKDINQEVYNFLATAGAKYGVGFWRPGSGIIHQIILENYAYPGVLLIGTDSHTPN 170
Query: 240 XXXXXXXXXXXXXADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTV 299
                        ADAVDVMA IPWELKCPKVIGV+LTG L GWTS KDVILKVAGILTV
Sbjct: 171 GGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTV 230
Query: 300 KGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCT 359
           KGGTGAI+E                                       YHGPG+D+IS  
Sbjct: 231 KGGTGAIVE---------------------------------------YHGPGVDSIS-- 249
Query: 360 GMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYD 419
                                          CTGM TICNMGAEIGATTSVFPYN+RM  
Sbjct: 250 -------------------------------CTGMATICNMGAEIGATTSVFPYNHRMKK 278
Query: 420 FLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLG 479
           +L  T R DIA  A +++  L PD G  YDQLIE++L+ L+PH+NGPFTPDLAHP+ ++G
Sbjct: 279 YLSKTGRADIANLADEFKDHLVPDSGCHYDQLIEINLSELKPHINGPFTPDLAHPVAEVG 338
Query: 480 EAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRA 539
             A+K GWP+DI+V LIGSCTN+SYEDM R A++AK+A+AHGLK  + F +TPGSEQIRA
Sbjct: 339 SVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRA 398
Query: 540 TIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPA 599
           TIERDG AQ LR+ GG VLANACGPCIGQW+RKD+K GEKNTIV SYNRNFTGRNDANP 
Sbjct: 399 TIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPE 458
Query: 600 THAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQ 659
           THAFVTSPE+VTALAI GTL F+P +D LTG DGK FKL  P  DELP   FDPG DTYQ
Sbjct: 459 THAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQ 518
Query: 660 PPPKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLK 719
            PPKD S   VDV P SQRLQLLEPFD WD KD++D+ +LIKVKGKCTTDHISAAGPWLK
Sbjct: 519 HPPKDSSGQRVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLK 578
Query: 720 FRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENY 779
           FRGHLDNISNNL + A N+EN + N V+N +T ++GPV + AR YK  G+ WV +GDENY
Sbjct: 579 FRGHLDNISNNLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENY 638
Query: 780 GEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRIS 839
           GEGSSREH+ALEPR LGGRAII KSFARIHETNLKKQGLLPLTFA+P+DY+KI P D+++
Sbjct: 639 GEGSSREHSALEPRFLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLT 698
Query: 840 LVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
           + GLKD APGKP+T  IKH +G  E I LNH+ NE QI WF+A
Sbjct: 699 IQGLKDFAPGKPLTCIIKHPNGTQETILLNHTFNETQIEWFRA 741
>pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 Back     alignment and structure
>pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 Back     alignment and structure
>pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 Back     alignment and structure
>pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 Back     alignment and structure
>pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 Back     alignment and structure
>pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 Back     alignment and structure
>pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 Back     alignment and structure
>pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 Back     alignment and structure
>pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 Back     alignment and structure
>pdb|4F7H|A Chain A, The Crystal Structure Of Kindlin-2 Pleckstrin Homology Domain In Free Form Length = 173 Back     alignment and structure
>pdb|2LKO|A Chain A, Structural Basis Of Phosphoinositide Binding To Kindlin-2 Pleckstrin Homology Domain In Regulating Integrin Activation Length = 138 Back     alignment and structure
>pdb|2YS3|A Chain A, Solution Structure Of The Ph Domain Of Kindlin-3 From Human Length = 137 Back     alignment and structure
>pdb|4BBK|A Chain A, Structural And Functional Characterisation Of The Kindlin-1 Pleckstrin Homology Domain Length = 165 Back     alignment and structure
>pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud) From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271) Length = 170 Back     alignment and structure
>pdb|3Q3W|A Chain A, Isopropylmalate Isomerase Small Subunit From Campylobacter Jejuni. Length = 203 Back     alignment and structure
>pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus Mutans Length = 213 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1087
1c96_A753 Mitochondrial aconitase; lyase, tricarboxylic acid 0.0
2b3y_A888 Iron-responsive element binding protein 1; IRP1 IR 2e-76
1l5j_A865 Aconitate hydratase 2; molecular recognition, RNA 8e-72
1l5j_A 865 Aconitate hydratase 2; molecular recognition, RNA 3e-05
4f7h_A173 Fermitin family homolog 2; beta-barrel, membrane b 8e-55
4f7h_A173 Fermitin family homolog 2; beta-barrel, membrane b 9e-10
2ys3_A137 UNC-112-related protein 2; PH domain, kindlin-3, s 2e-38
2ys3_A137 UNC-112-related protein 2; PH domain, kindlin-3, s 4e-08
2pkp_A170 Homoaconitase small subunit; beta barrel, amino-ac 1e-18
1v7l_A163 3-isopropylmalate dehydratase small subunit; beta 2e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
2cof_A107 Protein KIAA1914; PH domain, structural genomics, 1e-10
4a6h_A120 Phosphatidylinositol 4,5-bisphosphate-binding Pro 3e-09
1dro_A122 Beta-spectrin; cytoskeleton; NMR {Drosophila melan 5e-08
1pls_A113 Pleckstrin homology domain; phosphorylation; NMR { 7e-08
1wgq_A109 FYVE, rhogef and PH domain containing 6; ethanol d 1e-07
3h5j_A171 3-isopropylmalate dehydratase small subunit; leuci 2e-07
1wjm_A123 Beta-spectrin III; PH domain, signal transduction, 3e-07
2dkp_A128 Pleckstrin homology domain-containing family A mem 4e-07
2yry_A122 Pleckstrin homology domain-containing family A mem 5e-07
1upq_A123 PEPP1; PH domain, phosphoinositide binding, signal 6e-07
1btn_A106 Beta-spectrin; signal transduction protein; HET: I 6e-07
3pp2_A124 RHO GTPase-activating protein 27; PH domain, GTPas 7e-07
2d9y_A117 Pleckstrin homology domain-containing protein fami 9e-07
2hcu_A213 3-isopropylmalate dehydratase small subunit; beta 1e-06
1u5d_A108 SKAP55, SRC kinase-associated phosphoprotein of 55 1e-06
2j59_M168 RHO-GTPase activating protein 10; ARF, ARF1, ARFBD 1e-06
3cxb_B112 Pleckstrin homology domain-containing family M mem 2e-06
2p0d_A129 RHO GTPase-activating protein 9; protein-phosphoin 2e-06
3q3w_A203 3-isopropylmalate dehydratase small subunit; struc 3e-06
1u5e_A211 SRC-associated adaptor protein; novel dimerization 6e-06
2y7b_A134 Actin-binding protein anillin; cell cycle; 1.90A { 8e-06
3a8p_A 263 T-lymphoma invasion and metastasis-inducing protei 1e-05
2dtc_A126 RAL guanine nucleotide exchange factor ralgps1A; P 1e-05
3a8n_A 279 TIAM-1, T-lymphoma invasion and metastasis-inducin 3e-05
2da0_A114 130-kDa phosphatidylinositol 4,5-biphosphate- depe 5e-05
1x1f_A149 Signal-transducing adaptor protein 1; docking prot 5e-05
1fao_A126 Dual adaptor of phosphotyrosine and 3- phosphoinos 7e-05
1v89_A118 Hypothetical protein KIAA0053; pleckstrin homology 8e-05
2coc_A112 FYVE, rhogef and PH domain containing protein 3; s 8e-05
1u5f_A148 SRC-associated adaptor protein; PH domain of SKAP- 9e-05
2dhk_A119 TBC1 domain family member 2; PH domain, paris-1, s 1e-04
3rcp_A103 Pleckstrin homology domain-containing family A ME; 1e-04
2rsg_A94 Collagen type IV alpha-3-binding protein; pleckstr 3e-04
2i5f_A109 Pleckstrin; PH domain, protein-inositol phosphate 4e-04
1x05_A129 Pleckstrin; PH domain, structural genomics, NPPSFA 8e-04
2d9x_A120 Oxysterol binding protein-related protein 11; PH d 9e-04
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 Back     alignment and structure
 Score = 1171 bits (3031), Expect = 0.0
 Identities = 507/751 (67%), Positives = 576/751 (76%), Gaps = 72/751 (9%)

Query: 132 RLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVEDLKRAKSQNEE 191
           RLRPDRVAMQDATAQMAMLQFISSGLP+VAVPSTIHCDHLIEAQ+GG +DL+RAK  N+E
Sbjct: 62  RLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTIHCDHLIEAQLGGEKDLRRAKDINQE 121

Query: 192 VYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVG 251
           VY FL +AGAKYGVGFW PGSGIIHQIILENYA+PG+L+IGTDSHTPNGGGLGG+CIGVG
Sbjct: 122 VYNFLATAGAKYGVGFWRPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVG 181

Query: 252 GADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHG 311
           GADAVDVMA IPWELKCPKVIGV+LTG L GWTS KDVILKVAGILTVKGGTGAI+E   
Sbjct: 182 GADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVE--- 238

Query: 312 PGIDNISCTGMGTICNMGAEIGATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEI 371
                                               YHGPG+D+ISCTGM TICNMGAEI
Sbjct: 239 ------------------------------------YHGPGVDSISCTGMATICNMGAEI 262

Query: 372 GATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAK 431
           GATTSVFPYN R                                 M  +L  T R DIA 
Sbjct: 263 GATTSVFPYNHR---------------------------------MKKYLSKTGRADIAN 289

Query: 432 EAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDI 491
            A +++  L PD G  YDQ+IE++L+ L+PH+NGPFTPDLAHP+ ++G  A+K GWP+DI
Sbjct: 290 LADEFKDHLVPDPGCHYDQVIEINLSELKPHINGPFTPDLAHPVAEVGSVAEKEGWPLDI 349

Query: 492 KVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLR 551
           +V LIGSCTN+SYEDM R A++AK+A+AHGLK  + F +TPGSEQIRATIERDG AQ LR
Sbjct: 350 RVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLR 409

Query: 552 EFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVT 611
           + GG VLANACGPCIGQW+RKD+K GEKNTIV SYNRNFTGRNDANP THAFVTSPE+VT
Sbjct: 410 DVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVT 469

Query: 612 ALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGSSLSVD 671
           ALAI GTL F+P +D LTG DGK FKL  P  DELP   FDPG DTYQ PPKD S   V 
Sbjct: 470 ALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDSSGQRVA 529

Query: 672 VDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNL 731
           V P SQRLQLLEPFD WD KD++D+ +LIKVKGKCTTDHISAAGPWLKFRGHLDNISNNL
Sbjct: 530 VSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNL 589

Query: 732 FLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALE 791
            + A N EN + N V+N +T ++GPV + AR YK  G+ WV +GDENYGEG+SREH+ALE
Sbjct: 590 LIGAINIENRKANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGASREHSALE 649

Query: 792 PRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPGKP 851
           PRHLGGRAII KSFARIHETNLKKQGLLPLTFA+P+DY+KI P D++++ GLKD APGKP
Sbjct: 650 PRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFAPGKP 709

Query: 852 VTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
           +   IKH +G  E I LNH+ NE QI WF+A
Sbjct: 710 LKCIIKHPNGTQETILLNHTFNETQIEWFRA 740
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 Back     alignment and structure
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 Back     alignment and structure
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 Back     alignment and structure
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Length = 173 Back     alignment and structure
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Length = 173 Back     alignment and structure
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137 Back     alignment and structure
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137 Back     alignment and structure
>2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Length = 170 Back     alignment and structure
>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107 Back     alignment and structure
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120 Back     alignment and structure
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 Length = 122 Back     alignment and structure
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113 Back     alignment and structure
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109 Back     alignment and structure
>3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Length = 171 Back     alignment and structure
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123 Back     alignment and structure
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128 Back     alignment and structure
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122 Back     alignment and structure
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123 Back     alignment and structure
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Length = 106 Back     alignment and structure
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124 Back     alignment and structure
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117 Back     alignment and structure
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Length = 213 Back     alignment and structure
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108 Back     alignment and structure
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168 Back     alignment and structure
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112 Back     alignment and structure
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Length = 129 Back     alignment and structure
>3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Length = 203 Back     alignment and structure
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211 Back     alignment and structure
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134 Back     alignment and structure
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Length = 263 Back     alignment and structure
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Length = 126 Back     alignment and structure
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Length = 279 Back     alignment and structure
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149 Back     alignment and structure
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126 Back     alignment and structure
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118 Back     alignment and structure
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112 Back     alignment and structure
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148 Back     alignment and structure
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103 Back     alignment and structure
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94 Back     alignment and structure
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109 Back     alignment and structure
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129 Back     alignment and structure
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1087
1c96_A753 Mitochondrial aconitase; lyase, tricarboxylic acid 100.0
2b3y_A888 Iron-responsive element binding protein 1; IRP1 IR 100.0
1l5j_A865 Aconitate hydratase 2; molecular recognition, RNA 100.0
4f7h_A173 Fermitin family homolog 2; beta-barrel, membrane b 100.0
4bbk_A165 Kindlin-1, fermitin family homolog 1; PH domain, c 100.0
2ys3_A137 UNC-112-related protein 2; PH domain, kindlin-3, s 100.0
1v7l_A163 3-isopropylmalate dehydratase small subunit; beta 100.0
2pkp_A170 Homoaconitase small subunit; beta barrel, amino-ac 100.0
3vba_A176 Isopropylmalate/citramalate isomerase small subun; 99.97
2hcu_A213 3-isopropylmalate dehydratase small subunit; beta 99.95
3h5j_A171 3-isopropylmalate dehydratase small subunit; leuci 99.95
3q3w_A203 3-isopropylmalate dehydratase small subunit; struc 99.95
1l5j_A 865 Aconitate hydratase 2; molecular recognition, RNA 99.89
1v88_A130 Oxysterol binding protein-related protein 8; vesic 99.34
1wgq_A109 FYVE, rhogef and PH domain containing 6; ethanol d 99.03
2coc_A112 FYVE, rhogef and PH domain containing protein 3; s 98.94
2cof_A107 Protein KIAA1914; PH domain, structural genomics, 98.94
2y7b_A134 Actin-binding protein anillin; cell cycle; 1.90A { 98.92
1wjm_A123 Beta-spectrin III; PH domain, signal transduction, 98.86
1upq_A123 PEPP1; PH domain, phosphoinositide binding, signal 98.85
1v89_A118 Hypothetical protein KIAA0053; pleckstrin homology 98.83
2dkp_A128 Pleckstrin homology domain-containing family A mem 98.83
1fgy_A127 GRP1; PH domain, signaling protein; HET: 4IP; 1.50 98.83
1wg7_A150 Dedicator of cytokinesis protein 9; pleckstrin hom 98.81
2yry_A122 Pleckstrin homology domain-containing family A mem 98.8
1btn_A106 Beta-spectrin; signal transduction protein; HET: I 98.79
1fao_A126 Dual adaptor of phosphotyrosine and 3- phosphoinos 98.79
3tca_A291 Amyloid beta A4 precursor protein-binding family 1 98.78
2d9x_A120 Oxysterol binding protein-related protein 11; PH d 98.76
2dhk_A119 TBC1 domain family member 2; PH domain, paris-1, s 98.76
1pls_A113 Pleckstrin homology domain; phosphorylation; NMR { 98.76
3rcp_A103 Pleckstrin homology domain-containing family A ME; 98.75
2d9y_A117 Pleckstrin homology domain-containing protein fami 98.75
2p0d_A129 RHO GTPase-activating protein 9; protein-phosphoin 98.73
2i5f_A109 Pleckstrin; PH domain, protein-inositol phosphate 98.72
2dtc_A126 RAL guanine nucleotide exchange factor ralgps1A; P 98.72
1u5d_A108 SKAP55, SRC kinase-associated phosphoprotein of 55 98.68
1x05_A129 Pleckstrin; PH domain, structural genomics, NPPSFA 98.68
2rsg_A94 Collagen type IV alpha-3-binding protein; pleckstr 98.68
3cxb_B112 Pleckstrin homology domain-containing family M mem 98.64
1u5f_A148 SRC-associated adaptor protein; PH domain of SKAP- 98.61
1dro_A122 Beta-spectrin; cytoskeleton; NMR {Drosophila melan 98.61
1v5u_A117 SBF1, SET binding factor 1; MTMR5, the pleckstrin 98.6
4a6h_A120 Phosphatidylinositol 4,5-bisphosphate-binding Pro 98.6
2cod_A115 Centaurin-delta 1; ARF GAP and RHO GAP with ankyri 98.58
1x1g_A129 Pleckstrin 2; PH domain, structural genomics, rike 98.56
3pp2_A124 RHO GTPase-activating protein 27; PH domain, GTPas 98.56
2dn6_A115 KIAA0640 protein; PH domain, structural genomics, 98.56
2da0_A114 130-kDa phosphatidylinositol 4,5-biphosphate- depe 98.56
1u5e_A211 SRC-associated adaptor protein; novel dimerization 98.52
1eaz_A125 Tandem PH domain containing protein-1; lipid-bindi 98.52
3a8p_A 263 T-lymphoma invasion and metastasis-inducing protei 98.47
2j59_M168 RHO-GTPase activating protein 10; ARF, ARF1, ARFBD 98.44
2kc2_A128 Talin-1, F1; FERM, adhesion, cell membrane, cell p 98.44
2w2x_D124 1-phosphatidylinositol-4,5-bisphosphate phosphodie 98.4
1wi1_A126 Calcium-dependent activator protein for secretion, 98.4
2r09_A347 Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph 98.4
1x1f_A149 Signal-transducing adaptor protein 1; docking prot 98.38
3tfm_A228 Myosin X; split PH domain, motor protein; 2.53A {R 98.38
2lul_A164 Tyrosine-protein kinase TEC; structural genomics, 98.38
3aj4_A112 Pleckstrin homology domain-containing family B ME; 98.28
1dyn_A125 Dynamin; signal transduction protein; 2.20A {Homo 98.26
1v5p_A126 Pleckstrin homology domain-containing, family A; T 98.23
1unq_A125 RAC-alpha serine/threonine kinase; transferase, pl 98.21
1qqg_A 264 IRS-1, insulin receptor substrate 1; beta-sandwhic 98.17
1btk_A169 Bruton'S tyrosine kinase; transferase, PH domain, 98.17
3lju_X386 ARF-GAP with dual PH domain-containing protein 1; 98.09
2d9v_A130 Pleckstrin homology domain-containing protein fami 98.05
4bbk_A165 Kindlin-1, fermitin family homolog 1; PH domain, c 98.04
2q13_A385 DCC-interacting protein 13 alpha; APPL1, BAR domai 98.0
4f7h_A173 Fermitin family homolog 2; beta-barrel, membrane b 97.98
4h8s_A407 DCC-interacting protein 13-beta; BAR domain, pleck 97.91
2rov_A117 RHO-associated protein kinase 2; ATP-binding, coil 97.91
2rlo_A128 Centaurin-gamma 1; split PH domain, alternative sp 97.88
4gmv_A281 RAS-associated and pleckstrin homology domains-CO 97.79
3a8n_A 279 TIAM-1, T-lymphoma invasion and metastasis-inducin 97.7
3hk0_A256 Growth factor receptor-bound protein 10; GRB10, RA 97.56
3lju_X 386 ARF-GAP with dual PH domain-containing protein 1; 97.18
2ys3_A137 UNC-112-related protein 2; PH domain, kindlin-3, s 97.09
2fjl_A150 1-phosphatidylinositol-4,5-bisphosphate phosphodie 96.71
4ejn_A 446 RAC-alpha serine/threonine-protein kinase; AKT1, a 96.46
1v61_A132 RAC/CDC42 guanine nucleotide exchange factor (GEF) 90.9
3qwm_A140 Iqsec1, IQ motif and SEC7 domain-containing protei 89.39
2d9w_A127 Docking protein 2; PH domain, structural genomics, 86.74
1nty_A311 Triple functional domain protein; DBL, pleckstrin, 85.5
1zc3_B113 Exocyst complex protein EXO84; exocytosis, small G 84.38
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Back     alignment and structure
Probab=100.00  E-value=2e-182  Score=1623.36  Aligned_cols=707  Identities=72%  Similarity=1.195  Sum_probs=675.5

Q ss_pred             CCCCchhhhccc----------cccCCCceeccccccccccchhhHHHHHHHHcCCCcccCCceeeecccccccCCCchh
Q psy3833         112 SKGRTLADSSYE----------AEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVED  181 (1087)
Q Consensus       112 ~kGkTLAdKg~E----------~VrpGe~V~l~~d~v~~qD~Tg~~a~~~~~~~g~~~v~~p~~~~~DH~v~a~~~~~~d  181 (1087)
                      .+|+||+||.++          .+++|+++.++||||++||+|+|||+.+|+++|.+++++|..+++||++|++.++..|
T Consensus        32 ~~~~Tl~eKIl~~H~~~~~~~~~~~~g~~i~~~~drvl~hD~T~~~a~~~l~~~G~~~v~~P~~~~~DH~v~~~~~~~~d  111 (753)
T 1c96_A           32 NRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTIHCDHLIEAQLGGEKD  111 (753)
T ss_dssp             CSCCCHHHHHHHTTBSCTTTCCCCTTTCEEEECCSEEEEETTTHHHHHHHHHHHTCSSCSSCEEEECCSSCCBSSCHHHH
T ss_pred             CCCCCHHHHHHHHHhCCcccccccCCCCEEEEEccEEEEeccccHHHHHHHHHhCCCCCCCCCceecCCCCCCCCCcccc
Confidence            678999999762          2367889999999999999999999999999999999999999999999998776668


Q ss_pred             HHHHhhhhHHHHHHHHHHHHhcCceecCCCCcceeeecccccccCCCeEecCCCCccCccccceeeccccHHHHHHHHhc
Q psy3833         182 LKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMAD  261 (1087)
Q Consensus       182 ~~~~~~~n~e~~~fl~~~~~~~Gi~~~~pG~GIiHqv~lE~~~~Pg~~~vGtDSHT~~~GglGala~GvG~~d~a~~ma~  261 (1087)
                      ++.++.+|+++|+||+|++++|||.|++||+||||||++|+|++||+++|||||||||+||||+||||||++|++++|+|
T Consensus       112 ~~~~~~~n~e~~~~l~~~a~~~gi~~~~pg~GI~Hqv~~E~~~~Pg~~ivGtDSHT~t~GalG~la~GvG~~e~~~vmag  191 (753)
T 1c96_A          112 LRRAKDINQEVYNFLATAGAKYGVGFWRPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAG  191 (753)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHTCEEECTTSBCHHHHHHHHTCCTTCEEEESSTTGGGGGGGTCEEEECCHHHHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHHHHHHHCCCEEECCCCCeeCeEecccccCCCcEEecCCCCCCccchhhhheeccCHHHHHHHHhC
Confidence            88888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEeecCcEEEEEEECcCCCCcchhHHHHHHHHHhcccCcccEEEEEeCCcccccCccccccccccccccccccccccc
Q psy3833         262 IPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPY  341 (1087)
Q Consensus       262 g~~~l~vPe~V~V~l~G~l~~gVt~kDviL~i~g~L~~~G~~g~ivEf~G~gv~~LSv~~R~Ti~NMs~E~~A~~~~~~~  341 (1087)
                      ++|+|++||+|+|+|+|+|++|||+|||||+|+++|+++|++|++|||+||||++||+++|||||||             
T Consensus       192 q~~~~~~P~vv~V~l~G~L~~gVtakDviL~ii~~l~~~G~~g~~vEf~G~gv~~LS~~~R~TI~NM-------------  258 (753)
T 1c96_A          192 IPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNM-------------  258 (753)
T ss_dssp             CCEEEECCEEEEEEEESCCCTTCCHHHHHHHHHHHHTTTTTTTEEEEEESGGGGGSCHHHHHHHHHH-------------
T ss_pred             CeeeccCCcEEEEEEeeecCCCccHHHHHHHHHHHhccCCcceEEEEEECCccccCCcchhhhhhcc-------------
Confidence            9999999999999999999999999999999999999999999999999999999999999999999             


Q ss_pred             cchhhcccCCCccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCceeecccCcHHHHHHH
Q psy3833         342 NKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFL  421 (1087)
Q Consensus       342 ~~~v~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~m~~E~GAt~~if~~d~~t~~yL  421 (1087)
                                                                                 ++|+||++|+||+|++|++||
T Consensus       259 -----------------------------------------------------------a~E~GA~~gifp~De~T~~YL  279 (753)
T 1c96_A          259 -----------------------------------------------------------GAEIGATTSVFPYNHRMKKYL  279 (753)
T ss_dssp             -----------------------------------------------------------GGGGTCSEEECCCCHHHHHHH
T ss_pred             -----------------------------------------------------------chhhCcccccccCcHHHHHHH
Confidence                                                                       889999999999999999999


Q ss_pred             HhcCChHHHHHHHHhhccCCCCCCCcccEEEEEeCCCCccccccCCCCCccccccccchhhhhCCCccceeEEEEeccCC
Q psy3833         422 KATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTN  501 (1087)
Q Consensus       422 ~~~~r~~~~~~~~~~~~~l~aD~dA~Y~~vieiDLs~ieP~vA~P~~Pd~v~~lse~~~~~~~~g~~~~Id~vfIGSCTn  501 (1087)
                      +.|+|.+.++.+++|++.|.+|++|.|+++|+||||+|||+||||++|||++||+|+.+..++++++.+||+||||||||
T Consensus       280 ~~~gr~~~~~~~~~y~~~l~~D~~A~Yd~~ieiDls~leP~va~P~~P~~~~~v~e~~~~~~~~~~~~~Vd~~~IGSCTN  359 (753)
T 1c96_A          280 SKTGRADIANLADEFKDHLVPDPGCHYDQVIEINLSELKPHINGPFTPDLAHPVAEVGSVAEKEGWPLDIRVGLIGSCTN  359 (753)
T ss_dssp             HHTTCHHHHHHHHHTGGGSSCCTTCCCSEEEEEEGGGCCCEEECSSSTTCEEEHHHHHHHHHHHTCCCBEEEEEEBTTTB
T ss_pred             HhcCCcHHHHHHHHHHhhccCCCCCceeEEEEEEccccceeecCCCCCcceeEhHHhhhhHhhcCCccceEEEEEecCCC
Confidence            99999988999999988899999999999999999999999999999999999999998877788888999999999999


Q ss_pred             CChHHHHHHHHHHHHhHhCCCCCCCCEEEecCcHHHHHHHHHcChHHHHHhcCcEEecCCccccccCCCcccccCCccee
Q psy3833         502 ASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNT  581 (1087)
Q Consensus       502 ~~~~dl~aAA~ilk~a~~~~~~~~v~~~v~PgS~~v~~~l~~~G~~~~l~~aGa~i~~pGCg~CiG~~~~~~v~~g~~~~  581 (1087)
                      +|++||++||+|||+|+++|++++||++|+|||++|+++|+++|++++|.+|||+|.+||||+|+||+++..+.+++.++
T Consensus       360 ~~~~Dl~~AA~ilkga~~~~v~~~V~~~v~PgS~~V~~~~~~~Gl~~~l~~aG~~i~~~gCg~CiG~~~~~~~~~~~~~~  439 (753)
T 1c96_A          360 SSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNT  439 (753)
T ss_dssp             CSHHHHHHHHHHHHHHHTTTCCCSSEEEECCSBHHHHHHHHHTTHHHHHHHTTEEECCSSCGGGGTCBCCCSSCTTCCEE
T ss_pred             CCHHHHHHHHHHhccHhhcCCCCCceEEEeCCCHHHHHHHHHcCcHHHHHHcCcEEecCCceeeecCCCCcccccCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999864445677778


Q ss_pred             EEeecCCCCCCCCCCCCCcceeecCHHHHHHHHHhCccccCCCCCCCCCCCCCCeeecCCCCCCCCCCCcCCCCccccCC
Q psy3833         582 IVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPP  661 (1087)
Q Consensus       582 ~vsT~NRNF~gR~G~~p~~~~yLaSp~lvAAsAiaG~I~fdp~~d~L~~~dG~~v~l~dP~~~eip~~~~~~~~~~~~~~  661 (1087)
                      +|||+||||+||||++|++++|||||+||||+||+|+|+|||++++|.++||++|+|+||+.+|+|++.|..++..|+.|
T Consensus       440 ~vsT~NRNF~GR~gG~p~~~~yLaSP~~vaA~AiaG~i~~d~~~d~l~~~~g~~v~l~~p~~~e~~~~~f~~~~~~~~~~  519 (753)
T 1c96_A          440 IVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHP  519 (753)
T ss_dssp             EEESSSCCCTTTTTSCTTEEEEECCHHHHHHHHHHCBTTCCTTTCCCCCSSCCCCCCCCCCCCSSCSSCCCCCSCCEECC
T ss_pred             EEecccCCcccccCCCCCCceeecCHHHHHHHHHcCCcccCcccccccCCCCCeeeecCCccchhhhhhccCCccccccC
Confidence            99999999999997678899999999999999999999999999999889999999999999999998899899999988


Q ss_pred             CCCCCCceEecCCCCccccCCCCCCCCcccccccceeeeeecCccccccccCCCCcccccCccccccccccccccccccC
Q psy3833         662 PKDGSSLSVDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLFLTATNAENG  741 (1087)
Q Consensus       662 ~~~~~~v~~~~~p~S~~l~~l~pf~~~~~~~i~~arvLl~~gd~iTTDhIsPAG~~L~~rg~~~~i~~~~l~~~~n~~~g  741 (1087)
                      +.+.+++.+.|+|+|+|++.+|||++|+..++.++++|++++|+||||||||||+||++||+++|+++|+|.+..+.+++
T Consensus       520 ~~~~~~~~~~~~p~s~~~~~~~~f~~~~~~~~~~~~vL~klgd~iTTDhIsPAG~~L~~rg~f~ni~~n~l~~~~~~~~g  599 (753)
T 1c96_A          520 PKDSSGQRVAVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENR  599 (753)
T ss_dssp             CSCCTTCCCCCCTTCSSBCCCCCCCCCCSSCEEEEEEEEEBCSCCBHHHHBCCGGGGGGTBCHHHHGGGBTTTSBBTTTC
T ss_pred             CCCCCcceEeeCCCCccccCCCCCCCCCccccccceEEEeccCCcccccccccchhhccccchhhhhhhhccccccccCC
Confidence            76666789999999999999999999999999999999999999999999999999999999999999999887777788


Q ss_pred             cccceEeecCCCcCChHHHHHHHHHcCCCcEEecCCCcCCCccchhhccccccccceEEEEechhHHHhhhhccCccceE
Q psy3833         742 EMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPL  821 (1087)
Q Consensus       742 ~~~~~~~~~~G~~~~ipd~A~~yk~~g~~~IVVAG~nyG~GSSRE~Aa~~~r~lGv~aVIA~SFarI~~~Nlin~GllpL  821 (1087)
                      +.+.++++++|+++.+|||+++|+++|.++|||||+|||||||||||||+++++||+||||+||+|||++||+|||||||
T Consensus       600 ~~~~~~~~~~~~~~~~~d~a~~y~~~g~~~iivag~n~G~GSSRe~Aa~~~~~~Gi~avIa~sfarI~~~N~i~~Gllpl  679 (753)
T 1c96_A          600 KANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPL  679 (753)
T ss_dssp             CBSCEECTTTCCEECHHHHHHHHHHHTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCHHHHHHHHHTTCEEE
T ss_pred             CcceeEEecCCcccccHHHHHHHHHhCCCeEEEecCcCCCCcchHHHHhhHHHcCeeEEEehhHHHHHHhhhhhcCCcce
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCcccCCCCCEEEEccccCcCCCCcEEEEEEecCCeEEEEEEEecCCHHHHHHHHhCCCCCchh
Q psy3833         822 TFANPSDYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITWFQAELPTRIPA  890 (1087)
Q Consensus       822 ~f~~~~~~~~l~~gD~i~I~~l~~l~pg~~v~v~v~~~dG~~~~~~l~~~lt~~E~e~~~aGGiLn~sr  890 (1087)
                      +|+++++|++|++||+|+|+++.++.+|+.+++.+++.+|+.++|++++++|+.|++||++||+|||.+
T Consensus       680 ~~~~~~~~~~l~~gd~i~I~gl~~l~~g~~v~~~i~~~~g~~~~~~~~~~~t~~e~~~~~aGGlLnyvk  748 (753)
T 1c96_A          680 TFADPADYNKIHPVDKLTIQGLKDFAPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMK  748 (753)
T ss_dssp             EESSGGGGGGCCTTCEEEEECGGGCCTTCCEEEEEECTTSCEEEEEEECCCCHHHHHHHHHTSHHHHHH
T ss_pred             eecCcchhhhcCCCCEEEEcChHHcCCCceEEEEEEecCCcEEEEEEeCCCCHHHHHHHHcCCHHHHHH
Confidence            999888999999999999999988999999998888889999999999999999999999999999865
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Back     alignment and structure
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Back     alignment and structure
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Back     alignment and structure
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus} Back     alignment and structure
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Back     alignment and structure
>2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Back     alignment and structure
>3vba_A Isopropylmalate/citramalate isomerase small subun; lyase, LEUD, cytosol; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Back     alignment and structure
>3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Back     alignment and structure
>3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Back     alignment and structure
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Back     alignment and structure
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Back     alignment and structure
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Back     alignment and structure
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Back     alignment and structure
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Back     alignment and structure
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Back     alignment and structure
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Back     alignment and structure
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} Back     alignment and structure
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Back     alignment and structure
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Back     alignment and structure
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Back     alignment and structure
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Back     alignment and structure
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Back     alignment and structure
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Back     alignment and structure
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Back     alignment and structure
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Back     alignment and structure
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 Back     alignment and structure
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Back     alignment and structure
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Back     alignment and structure
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Back     alignment and structure
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Back     alignment and structure
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Back     alignment and structure
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus} Back     alignment and structure
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A Back     alignment and structure
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Back     alignment and structure
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Back     alignment and structure
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Back     alignment and structure
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Back     alignment and structure
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Back     alignment and structure
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Back     alignment and structure
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Back     alignment and structure
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* Back     alignment and structure
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* Back     alignment and structure
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus} Back     alignment and structure
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Back     alignment and structure
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Back     alignment and structure
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} Back     alignment and structure
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Back     alignment and structure
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Back     alignment and structure
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A Back     alignment and structure
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Back     alignment and structure
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} Back     alignment and structure
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* Back     alignment and structure
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 Back     alignment and structure
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Back     alignment and structure
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens} Back     alignment and structure
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A Back     alignment and structure
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1087
d2b3ya2629 c.83.1.1 (A:2-630) Iron-responsive element binding 1e-100
d1acoa2527 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain 3e-81
d1acoa2527 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain 3e-60
d1l5ja3490 c.83.1.1 (A:373-862) Aconitase B, C-terminal domai 4e-77
d1acoa1226 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain 2e-76
d2b3ya1259 c.8.2.1 (A:631-889) ron-responsive element binding 8e-38
d1v7la_162 c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc 2e-10
d1btna_106 b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), 3e-08
d1droa_122 b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila 1e-07
d1upqa_107 b.55.1.1 (A:) Phosphoinositol 3-phosphate binding 9e-07
d1x1ga1116 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie 2e-06
d1plsa_113 b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta 2e-05
d2dyna_111 b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId 2e-05
d1u5ea1209 b.55.1.1 (A:14-222) Src-associated adaptor protein 2e-05
d1fgya_127 b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1 2e-04
d1eaza_103 b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 3e-04
d1u5da1106 b.55.1.1 (A:108-213) Src kinase-associated phospho 4e-04
>d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Aconitase iron-sulfur domain
superfamily: Aconitase iron-sulfur domain
family: Aconitase iron-sulfur domain
domain: Iron-responsive element binding protein 1, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  328 bits (842), Expect = e-100
 Identities = 133/558 (23%), Positives = 206/558 (36%), Gaps = 81/558 (14%)

Query: 133 LRPDRVAMQDATAQMAMLQFIS--------SGLPRV---AVPSTIHCDHLIEAQVGGVED 181
            +P RV +QD T   A++ F +         G P       P+ +  DH I+       D
Sbjct: 77  FKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRAD 136

Query: 182 -----LKRAKSQNEEVYAFLRS-AGAKYGVGFWHPGSGIIHQIILENYAFPGL------- 228
                      +N E + FL+  + A + +    PGSGIIHQ+ LE  A           
Sbjct: 137 SLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYY 196

Query: 229 --LMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSS 286
              ++GTDSHT    GLG L  GVGG +A  VM   P  +  P+VIG RL G      +S
Sbjct: 197 PDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTS 256

Query: 287 KDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRIN 346
            D++L +   L   G  G  +E+ GPG+  +S     TI NM  E GAT + FP ++   
Sbjct: 257 TDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSI 316

Query: 347 EYHGPGIDNISCTGMGTICNMGAE----IGATTSVFPYNQRINIDNISCTGMGTICNMGA 402
            Y      +                       +    + Q + +D      + T+    +
Sbjct: 317 TYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELD------LKTVVPCCS 370

Query: 403 EIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPH 462
                      ++   DF                +S L   +G K  Q+     N     
Sbjct: 371 GPKRPQDKVAVSDMKKDF----------------ESCLGAKQGFKGFQVAPEHHN----- 409

Query: 463 VNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASI-AKEAMAHG 521
                          + +  +       + ++ I SCTN S   +   A + AK+A+  G
Sbjct: 410 ----------DHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAG 459

Query: 522 --LKSSTPFNVTPGSEQIRATIERDGIAQ-------TLREFGGTVLANACGPCIGQWNRK 572
             +      +++PGS  +   ++  G+          +  +G        GP        
Sbjct: 460 LNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEA 519

Query: 573 DVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTL-TGS 631
             +       V S NRNF GR   N     ++ SP LV A AI GT+  D   + L   +
Sbjct: 520 ITQGDLVAVGVLSGNRNFEGRVHPNTRA-NYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578

Query: 632 DGKPFKLRD--PFGDELP 647
            G+   L+D  P  DE+ 
Sbjct: 579 KGQQVFLKDIWPTRDEIQ 596
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 Back     information, alignment and structure
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 Back     information, alignment and structure
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 Back     information, alignment and structure
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 Back     information, alignment and structure
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 Back     information, alignment and structure
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106 Back     information, alignment and structure
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122 Back     information, alignment and structure
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 Back     information, alignment and structure
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 Back     information, alignment and structure
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 Back     information, alignment and structure
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1087
d1acoa2527 Aconitase A, N-terminal domain {Cow (Bos taurus) [ 100.0
d2b3ya2629 Iron-responsive element binding protein 1, N-termi 100.0
d1l5ja3490 Aconitase B, C-terminal domain {Escherichia coli [ 100.0
d1acoa1226 Aconitase A, C-terminal domain {Cow (Bos taurus) [ 100.0
d2b3ya1259 ron-responsive element binding protein 1, C-termin 100.0
d1v7la_162 Isopropylmalate isomerase LeuD {Pyrococcus horikos 99.97
d2dyna_111 Dynamin {Human (Homo sapiens) [TaxId: 9606]} 99.02
d1l5ja2212 Aconitase B, second N-terminal domain {Escherichia 99.02
d1wjma_123 beta-spectrin {Human (Homo sapiens), brain 2 isofo 99.01
d1upqa_107 Phosphoinositol 3-phosphate binding protein-1, PEP 98.99
d1wgqa_109 FYVE, RhoGEF and PH domain containing protein 6, F 98.95
d2fjla1101 Phosphoinositide phospholipase C, PLC-gamma-1 {Rat 98.94
d1v88a_130 Oxysterol binding protein-related protein 8 (ORP-8 98.94
d1btna_106 beta-spectrin {Mouse (Mus musculus), brain [TaxId: 98.93
d2j59m1133 Rho GTPase-activating protein 21 {Human (Homo sapi 98.85
d2coda1102 Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 98.81
d2cofa195 KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} 98.79
d1faoa_100 Dual adaptor of phosphotyrosine and 3-phosphoinosi 98.78
d2elba2101 DCC-interacting protein 13-alpha, APPL1 {Human (Ho 98.78
d1u5fa1111 Src-associated adaptor protein Skap2 {Mouse (Mus m 98.78
d2coca199 FYVE, RhoGEF and PH domain containing protein 3, F 98.76
d1plsa_113 Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} 98.64
d1v89a_118 Rho-GTPase-activating protein 25 (KIAA0053) {Human 98.63
d1u5ea1209 Src-associated adaptor protein Skap2 {Mouse (Mus m 98.59
d1u5da1106 Src kinase-associated phosphoprotein SKAP55 (SCAP1 98.59
d1fgya_127 Grp1 {Mouse (Mus musculus) [TaxId: 10090]} 98.53
d1droa_122 beta-spectrin {Fruit fly (Drosophila melanogaster) 98.52
d2i5fa1104 Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} 98.52
d1x1fa1136 Signal-transducing adaptor protein 1, STAP-1 {Huma 98.5
d1qqga1103 Insulin receptor substrate 1, IRS-1 {Human (Homo s 98.45
d1v5pa_126 Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} 98.41
d1eaza_103 Tapp1 {Human (Homo sapiens) [TaxId: 9606]} 98.31
d1omwa2119 G-protein coupled receptor kinase 2 (beta-adrenerg 98.3
d1wg7a_150 Dedicator of cytokinesis protein 9, DOCK9 {Human ( 98.29
d1v5ua_117 SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ 98.12
d1v5ma_136 SH2 and PH domain-containing adapter protein APS { 98.1
d1unqa_118 Rac-alpha serine/threonine kinase {Human (Homo sap 97.91
d1btka_169 Bruton's tyrosine kinase {Human (Homo sapiens) [Ta 97.91
d1x1ga1116 Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} 97.75
d2coaa1112 Protein kinase c, d2 type {Human (Homo sapiens) [T 97.75
d1wi1a_126 Calcium-dependent activator protein for secretion, 97.64
d1l5ja2212 Aconitase B, second N-terminal domain {Escherichia 96.36
d1w1ha_147 3-phosphoinositide dependent protein kinase-1 {Hum 95.2
d1v61a_132 Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ 94.76
d2dfka2162 Rho guanine nucleotide exchange factor 9, Collybis 93.54
d1maia_119 Phospholipase C delta-1 {Rat (Rattus norvegicus) [ 91.23
d1ntya2121 Triple functional domain protein TRIO {Human (Homo 90.05
d1fhoa_119 UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 87.9
d1zc3b1109 Exocyst complex protein EXO84 {Rat (Rattus norvegi 87.36
d2b3ya1259 ron-responsive element binding protein 1, C-termin 81.99
d1dbha2133 Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ 80.13
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Aconitase iron-sulfur domain
superfamily: Aconitase iron-sulfur domain
family: Aconitase iron-sulfur domain
domain: Aconitase A, N-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-126  Score=1106.83  Aligned_cols=483  Identities=75%  Similarity=1.238  Sum_probs=461.0

Q ss_pred             CCCCchhhhccc----------cccCCCceeccccccccccchhhHHHHHHHHcCCCcccCCceeeecccccccCCCchh
Q psy3833         112 SKGRTLADSSYE----------AEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGVED  181 (1087)
Q Consensus       112 ~kGkTLAdKg~E----------~VrpGe~V~l~~d~v~~qD~Tg~~a~~~~~~~g~~~v~~p~~~~~DH~v~a~~~~~~d  181 (1087)
                      .+++||++|.++          .++++++|.++||||++||.|+|||+.+|+++|.+++++|..+++||++|++.....|
T Consensus        32 ~rP~TL~EKI~~~Hl~~~~~~~~~~g~~~v~~~vDrv~~hD~T~~~a~~~l~~~g~~~~~~p~~v~~DH~v~~~~~~~~~  111 (527)
T d1acoa2          32 NRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTIHCDHLIEAQLGGEKD  111 (527)
T ss_dssp             CSCCCHHHHHHHTTBSCTTTCCCCTTTSEEEECCSEEEEEHHHHHHHHHHHHHHTCSSCSSCEEEECCSSCCBSSCHHHH
T ss_pred             CCCcCHHHHHHHHHhcccccCcccCCCceEEEecCEEEEEccchHHHHHHHHHcCCCCCCCCCCEEeCCCcCCccccccc
Confidence            678999999763          2356678999999999999999999999999999999999999999999998877788


Q ss_pred             HHHHhhhhHHHHHHHHHHHHhcCceecCCCCcceeeecccccccCCCeEecCCCCccCccccceeeccccHHHHHHHHhc
Q psy3833         182 LKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMAD  261 (1087)
Q Consensus       182 ~~~~~~~n~e~~~fl~~~~~~~Gi~~~~pG~GIiHqv~lE~~~~Pg~~~vGtDSHT~~~GglGala~GvG~~d~a~~ma~  261 (1087)
                      +..+...|+++++|+++++++||+.+++||+|||||+++|++++||++++|+||||||+||||+||||||++|++.+|+|
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~pg~GI~H~v~~E~~~~PG~~ivg~DSHT~t~GalGala~GvG~te~~~~~~t  191 (527)
T d1acoa2         112 LRRAKDINQEVYNFLATAGAKYGVGFWRPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAG  191 (527)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHTCEEECTTSBCHHHHHHHHTCCTTCEEEESSTTGGGGGGGTCEEEECCHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHHHhhhhhccceeecCCceEEEEcccccccCCeEEecCCCCccccccccceeccCcHHHHHHHHhC
Confidence            88888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEeecCcEEEEEEECcCCCCcchhHHHHHHHHHhcccCcccEEEEEeCCcccccCccccccccccccccccccccccc
Q psy3833         262 IPWELKCPKVIGVRLTGGLKGWTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPY  341 (1087)
Q Consensus       262 g~~~l~vPe~V~V~l~G~l~~gVt~kDviL~i~g~L~~~G~~g~ivEf~G~gv~~LSv~~R~Ti~NMs~E~~A~~~~~~~  341 (1087)
                      ++||+++||+|+|+|+|+|++|||+|||||+|++.|+++|++|++|||+|+|+++||+++|||||||             
T Consensus       192 ~~~~~~vPetv~v~l~G~l~~gvtakDviL~i~~~l~~~g~~g~~vEf~G~~i~~Ls~~~R~Ti~NM-------------  258 (527)
T d1acoa2         192 IPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNM-------------  258 (527)
T ss_dssp             CCEEEECCEEEEEEEESCCCTTCCHHHHHHHHHHHHCTTTTBTEEEEEESGGGGGSCHHHHHHHHHH-------------
T ss_pred             CceeecCCcEEEEEEecCCCCCccHHHHHHHHHHHHhhcCCCceeEEEeccccceeccccccchhhc-------------
Confidence            9999999999999999999999999999999999999999999999999999999999999999999             


Q ss_pred             cchhhcccCCCccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCceeecccCcHHHHHHH
Q psy3833         342 NKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFL  421 (1087)
Q Consensus       342 ~~~v~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~m~~E~GAt~~if~~d~~t~~yL  421 (1087)
                                                                                 ++|+||++|+||+|++|++||
T Consensus       259 -----------------------------------------------------------a~E~GA~~gif~~D~~t~~yl  279 (527)
T d1acoa2         259 -----------------------------------------------------------GAEIGATTSVFPYNHRMKKYL  279 (527)
T ss_dssp             -----------------------------------------------------------GGGGTBSEEECCCCHHHHHHH
T ss_pred             -----------------------------------------------------------cccccceeeEEeccHHHHHHH
Confidence                                                                       899999999999999999999


Q ss_pred             HhcCChHHHHHHHHhhccCCCCCCCcccEEEEEeCCCCccccccCCCCCccccccccchhhhhCCCccceeEEEEeccCC
Q psy3833         422 KATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTN  501 (1087)
Q Consensus       422 ~~~~r~~~~~~~~~~~~~l~aD~dA~Y~~vieiDLs~ieP~vA~P~~Pd~v~~lse~~~~~~~~g~~~~Id~vfIGSCTn  501 (1087)
                      +.++|.+.....+.++..|.+|+||+|+++|+||||+|||+||||++|||++|++++.....+++++.+||+||||||||
T Consensus       280 ~~~gr~~~~~~~~~~~~~l~~D~~A~Y~~~ieiDls~ieP~Va~P~~Pd~~~pv~e~~~~~~~~~~~~~Id~afIGSCTN  359 (527)
T d1acoa2         280 SKTGRADIANLADEFKDHLVPDSGCHYDQLIEINLSELKPHINGPFTPDLAHPVAEVGSVAEKEGWPLDIRVGLIGSCTN  359 (527)
T ss_dssp             HHTTCHHHHHHHHHTGGGSSCCTTCCCSEEEEEEGGGCCCEEECSSSTTCEEEHHHHHHHHHHHTCCCBEEEEEECSTTS
T ss_pred             hhcCccchhhcchhhhhhcccccCCccceEEEEEhHhchhheecCCCCcceeeechhhhhhhhhccCceeeEeeeccccC
Confidence            99999887777777777899999999999999999999999999999999999999998877788888999999999999


Q ss_pred             CChHHHHHHHHHHHHhHhCCCCCCCCEEEecCcHHHHHHHHHcChHHHHHhcCcEEecCCccccccCCCcccccCCccee
Q psy3833         502 ASYEDMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNT  581 (1087)
Q Consensus       502 ~~~~dl~aAA~ilk~a~~~~~~~~v~~~v~PgS~~v~~~l~~~G~~~~l~~aGa~i~~pGCg~CiG~~~~~~v~~g~~~~  581 (1087)
                      +|++||++||.|||+++++|+++++|++|+|||++|+++|+++|++++|.+|||+|.+||||+|+||+++..+.+|+.++
T Consensus       360 ~r~~Dl~~AA~ilk~~~~~g~~~~v~~~v~PgS~~V~~~~~~~Gl~~~l~~aG~~i~~pgCg~CiG~~~~~~~~~ge~~~  439 (527)
T d1acoa2         360 SSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNT  439 (527)
T ss_dssp             CSHHHHHHHHHHHHHHHHTTCCCSSEEEECCSBHHHHHHHHHTTHHHHHHHTTEEECCSSCGGGGTCBCCCSSCTTCCEE
T ss_pred             CCchHHHHHHHHHhhHhhcCCccccceEEecCcHHHHHHHHHCchHHHHHHcCcEEccCcchhhccCCcccccccCcCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999998776778898888


Q ss_pred             EEeecCCCCCCCCCCCCCcceeecCHHHHHHHHHhCccccCCCCCCCCCCCCCCeeecCCCCCCCCCCCcCCCCccccCC
Q psy3833         582 IVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPP  661 (1087)
Q Consensus       582 ~vsT~NRNF~gR~G~~p~~~~yLaSp~lvAAsAiaG~I~fdp~~d~L~~~dG~~v~l~dP~~~eip~~~~~~~~~~~~~~  661 (1087)
                      ||||+||||+||||.++.+++|||||+||||+||+|+|++||++|+|.+.+|++|+|+.|+.+|+|+..|+++.+.|+.|
T Consensus       440 ~vsTsNRNF~GR~G~~~~a~~yLaSP~~vaA~Ai~G~It~dp~~d~l~~~~g~~v~L~~P~~~ei~~~~~~~~~~~~~~P  519 (527)
T d1acoa2         440 IVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHP  519 (527)
T ss_dssp             EEESSSCCCTTTTTSCTTEEEEECCHHHHHHHHHHCBSSCCTTTCEEECTTSCEEECCCCCCCSSCSSCCCCCSCCEECC
T ss_pred             EEEcCCCCCCcCCCCCCCcceEeCCHHHHHHHHhhceeecCCCcCcccCCCCCeeEecCCChhhcccccCCCCcccCCCC
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy3833         662 PKDGS  666 (1087)
Q Consensus       662 ~~~~~  666 (1087)
                      |.+++
T Consensus       520 p~~~~  524 (527)
T d1acoa2         520 PKDSS  524 (527)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            87654
>d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Back     information, alignment and structure
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Back     information, alignment and structure
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure