Psyllid ID: psy3878


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MALMDYKFYRDITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPAQLGSLSPTSQRNTNSSTPNNTSTSSNNNNNTSYTSRVITSSCAATPTYSTSGDIYFSGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSSFSIPHPTPPTPAPTTPTPRTRLYMKLINYFVSRYGVYSMTLYKTSFVFPGRDSKTCNL
cccccHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEEEEEEEEcccccccccc
cccccccccccccccccccccccHHHHHHHHHccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEcccccHHcccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccEEEEEEEEEEEEccccccccccc
MALMDYKFYRDitstehpglrgtpLAMLAAQCNklsnkspppladaavgkgfhpwkkspqsaggnsttpaqlgslsptsqrntnsstpnntstssnnnnntsytsrvitsscaatptystsgdiyfsgsqndnshQLLGKAVEShhlgsmysrhpyeswpfntmtssshhkpgdgmntgwwdvpaggwldmsggMHAQMAANYAassdyslshsiasnhlltsgQHLLNDtyksmlpaqssfsiphptpptpapttptprtRLYMKLINYFVSRYGVYSMTLYKtsfvfpgrdsktcnl
MALMDYKFYRDItstehpglrgTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPAQLgslsptsqrntnsstpnntstssnnnnntSYTSRVITSSCAATPTYSTSGDIYFSGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSsfsiphptpptpapttptprTRLYMKLINYFVSRYGVYSMTLYKtsfvfpgrdsktcnl
MALMDYKFYRDITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPAQLGSLsptsqrntnsstpnntstssnnnnntsytsRVITSSCAATPTYSTSGDIYFSGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSSFSIphptpptpapttptprtRLYMKLINYFVSRYGVYSMTLYKTSFVFPGRDSKTCNL
*****YKFYRDIT**************************************************************************************************************IY***************************************************NTGWWDVPAGGWLDMSGGMHAQMAANYAA***YSL***IASNHLLT****L**********************************RLYMKLINYFVSRYGVYSMTLYKTSFVFP*********
********Y*************TPLAMLAAQ***************************************************************************************************************************PYESW********************WWDVPAGG*******************************************************************************LINYFVSRYGVYSMTLYKTSFVFPGRDS*T***
MALMDYKFYRDITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPW******************************************NNNTSYTSRVITSSCAATPTYSTSGDIYFSGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSSFSIPHPTPPTPAPTTPTPRTRLYMKLINYFVSRYGVYSMTLYKTSFVFPGRDSKTCNL
**LMDYKFYRDITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLA**********************************************************************************SGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSS************WW*VPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSSF*****************RTRLYMKLINYFVSRYGVYSMTLYKTSFVFPGRDS*****
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MALMDYKFYRDITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPAQLGSLSPTSQRNTNSSTPNNTSTSSNNNNNTSYTSRVITSSCAATPTYSTSGDIYFSGSQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPAGGWLDMSGGMHAQMAANYAASSDYSLSHSIASNHLLTSGQHLLNDTYKSMLPAQSSFSIPHPTPPTPAPTTPTPRTRLYMKLINYFVSRYGVYSMTLYKTSFVFPGRDSKTCNL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query299 2.2.26 [Sep-21-2011]
Q0VA40 422 Transcription factor Sp9 yes N/A 0.688 0.488 0.326 2e-11
Q6NW96 439 Transcription factor Sp9 yes N/A 0.632 0.430 0.290 6e-09
Q6P0J3 437 Transcription factor Sp8 no N/A 0.622 0.425 0.343 2e-08
Q64HY3 484 Transcription factor Sp9 yes N/A 0.729 0.450 0.282 5e-08
P0CG40 484 Transcription factor Sp9 yes N/A 0.729 0.450 0.282 5e-08
Q64HY5 480 Transcription factor Sp8 yes N/A 0.364 0.227 0.310 0.0007
>sp|Q0VA40|SP9_XENTR Transcription factor Sp9 OS=Xenopus tropicalis GN=sp9 PE=2 SV=1 Back     alignment and function desciption
 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 113/248 (45%), Gaps = 42/248 (16%)

Query: 16  EHPGLRGTPLAMLAAQCNKLSN---KSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPAQL 72
           E P    TPLAMLAA CNK+ N    S  P + A    GFHPWK+S  S    S+     
Sbjct: 8   EEPRFGTTPLAMLAATCNKIGNTSPLSSLPESSAFAKGGFHPWKRSSSSCSLGSSLGGFA 67

Query: 73  GSLSPTSQRNTNSSTPNNT-----STSSNNNNNTSYTSRVITSSCAATPTYSTSGDIYFS 127
            + S  S   T  +   N+     STS  ++  +S  S + +S+   +P  S     + S
Sbjct: 68  VATSRASGALTGGTATANSAFCLASTSPTSSAFSSDYSGLFSSASGVSPQESAGQSAFIS 127

Query: 128 G--SQNDNSHQLLGKAVESHHLGSMYSRHPYESWPFNTMTSSSHHKPGDGMNTGWWDVPA 185
              +  +  +  +G A            HPYESW       S  H    G  + WWDV A
Sbjct: 128 KVHASAEGLYPRVGMA------------HPYESW-----YKSGFHSDVSGGASAWWDVHA 170

Query: 186 GG---WLDM---SGGMHAQMAAN---YAASSDY-SLSH----SIASNHLLTSGQHLL-ND 230
            G   WL++    G +H+  AA+    A S D+ SL+H    S  ++HLL  GQHLL  D
Sbjct: 171 AGPSTWLEVQNTQGALHSGAAAHGQLGAYSPDFSSLTHSAFSSTGASHLLPGGQHLLTQD 230

Query: 231 TYKSMLPA 238
            +K +LP+
Sbjct: 231 AFKPVLPS 238




Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos.
Xenopus tropicalis (taxid: 8364)
>sp|Q6NW96|SP9_DANRE Transcription factor Sp9 OS=Danio rerio GN=sp9 PE=2 SV=1 Back     alignment and function description
>sp|Q6P0J3|SP8_DANRE Transcription factor Sp8 OS=Danio rerio GN=sp8b PE=2 SV=1 Back     alignment and function description
>sp|Q64HY3|SP9_MOUSE Transcription factor Sp9 OS=Mus musculus GN=Sp9 PE=2 SV=1 Back     alignment and function description
>sp|P0CG40|SP9_HUMAN Transcription factor Sp9 OS=Homo sapiens GN=SP9 PE=3 SV=1 Back     alignment and function description
>sp|Q64HY5|SP8_CHICK Transcription factor Sp8 OS=Gallus gallus GN=SP8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
86515366 456 Sp-like zinc finger transcription factor 0.762 0.5 0.538 3e-57
170038230 497 transcription factor sp8,sp9 [Culex quin 0.765 0.460 0.532 4e-50
242018802 435 transcription factor Sp8, putative [Pedi 0.729 0.501 0.530 3e-48
157132383 497 transcription factor sp8,sp9 [Aedes aegy 0.698 0.420 0.534 5e-47
328703640 636 PREDICTED: transcription factor Sp9-like 0.749 0.352 0.455 6e-43
328703638 630 PREDICTED: transcription factor Sp9-like 0.749 0.355 0.455 7e-43
345481596 627 PREDICTED: transcription factor Sp9 [Nas 0.648 0.309 0.495 3e-42
195132217 675 GI15983 [Drosophila mojavensis] gi|19390 0.819 0.362 0.452 4e-42
332019269 476 Transcription factor Sp8 [Acromyrmex ech 0.722 0.453 0.506 9e-42
322792035 561 hypothetical protein SINV_15429 [Solenop 0.722 0.385 0.504 1e-41
>gi|86515366|ref|NP_001034509.1| Sp-like zinc finger transcription factor [Tribolium castaneum] gi|34979121|gb|AAQ83696.1| Sp-like zinc finger protein [Tribolium castaneum] gi|270014240|gb|EFA10688.1| lethal Sp8 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/284 (53%), Positives = 186/284 (65%), Gaps = 56/284 (19%)

Query: 11  DITSTEHPGLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQSAGGNSTTPA 70
           ++ + EHP LRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQ A   S+T  
Sbjct: 23  NVKAAEHPSLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSPSST-- 80

Query: 71  QLGSLSPTSQRNTNSSTPNNTSTSSNNNNNTSYTSRVITSSCAATPTYSTSG-DIYFSGS 129
                S  +QR         TSTS     N +Y+SR + +SC++ PT ++ G D+YF G+
Sbjct: 81  ---PSSLPTQR---------TSTS-----NPTYSSRSVMTSCSSVPTTASYGSDLYFPGA 123

Query: 130 QN----DNSH------QLLGKA--VESHHLGSMYSRHPYESWPFNTMTSSSHH---KPGD 174
            +    DNSH       LLGK     +HHLGS+YSRHPYESWPFNTM+ ++HH   K   
Sbjct: 124 TSQPPTDNSHVHHHQTSLLGKVEGAATHHLGSVYSRHPYESWPFNTMSGATHHGGIKSDS 183

Query: 175 GMNTGWWDVPA-GGWLDMSGGMHAQMAANYAASSDY-SLSHSI-ASNHLLTSGQHLLNDT 231
             +  WWDV + G WLDMSGGMH QM ANY  S+DY SL+HS+ ASNHLL+SGQHLL DT
Sbjct: 184 VTSNAWWDVHSTGSWLDMSGGMH-QM-ANY--STDYSSLTHSLAASNHLLSSGQHLLQDT 239

Query: 232 YKSMLPAQ----SSFSIPHPTPPTPAPT---------TPTPRTR 262
           YKSMLP      +SF + H T   P+PT          P+PR++
Sbjct: 240 YKSMLPGAQTVGASFGL-HATGSAPSPTAGAGGLPPQVPSPRSQ 282




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038230|ref|XP_001846955.1| transcription factor sp8,sp9 [Culex quinquefasciatus] gi|167881768|gb|EDS45151.1| transcription factor sp8,sp9 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|242018802|ref|XP_002429860.1| transcription factor Sp8, putative [Pediculus humanus corporis] gi|212514889|gb|EEB17122.1| transcription factor Sp8, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157132383|ref|XP_001662547.1| transcription factor sp8,sp9 [Aedes aegypti] gi|108871203|gb|EAT35428.1| AAEL012404-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|328703640|ref|XP_001945146.2| PREDICTED: transcription factor Sp9-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328703638|ref|XP_003242260.1| PREDICTED: transcription factor Sp9-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345481596|ref|XP_001606079.2| PREDICTED: transcription factor Sp9 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195132217|ref|XP_002010540.1| GI15983 [Drosophila mojavensis] gi|193908990|gb|EDW07857.1| GI15983 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|332019269|gb|EGI59778.1| Transcription factor Sp8 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322792035|gb|EFZ16140.1| hypothetical protein SINV_15429 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
FB|FBgn0020378 715 Sp1 "Sp1" [Drosophila melanoga 0.404 0.169 0.510 8.7e-48
UNIPROTKB|E1BMR6 462 SP8 "Uncharacterized protein" 0.575 0.372 0.315 3e-21
ZFIN|ZDB-GENE-030131-9849 406 sp8a "sp8 transcription factor 0.377 0.278 0.357 1.1e-17
ZFIN|ZDB-GENE-030131-3654 455 sp8b "sp8 transcription factor 0.642 0.421 0.323 4.3e-15
MGI|MGI:2443471 486 Sp8 "trans-acting transcriptio 0.294 0.181 0.315 5.1e-14
UNIPROTKB|I3LMT4 487 SP8 "Uncharacterized protein" 0.294 0.180 0.315 6.5e-14
UNIPROTKB|Q8IXZ3 490 SP8 "Transcription factor Sp8" 0.294 0.179 0.305 2.9e-13
UNIPROTKB|E1C2Z1 402 E1C2Z1 "Uncharacterized protei 0.197 0.146 0.492 1.3e-12
RGD|1307619 452 Sp8 "Sp8 transcription factor" 0.331 0.219 0.339 2.9e-12
ZFIN|ZDB-GENE-040426-2313 439 sp9 "sp9 transcription factor" 0.715 0.487 0.304 9.3e-12
FB|FBgn0020378 Sp1 "Sp1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 291 (107.5 bits), Expect = 8.7e-48, Sum P(2) = 8.7e-48
 Identities = 72/141 (51%), Positives = 86/141 (60%)

Query:   109 TSSCAATPTYSTSGDIYF---SGSQNDNSHQ---LLGKA-VESHHLGSMYSRHPYESWPF 161
             +SS A+    +  GD+YF   S S  DN H    LLGK    +   G +YSRHPY+ WPF
Sbjct:   171 SSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYD-WPF 229

Query:   162 NTMTSSSHHKPGDGMNTGWWDV--PAGGWLDMSG-GMHAQMAANYAASSDYSLSHSIASN 218
             N +T    HK    +N+GWWD+   AG WLDM G GMH+ MA NYA S +YS   S  S+
Sbjct:   230 NAVT----HKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMA-NYA-SENYS---SALSH 280

Query:   219 HLLTSGQHLLNDTYKSMLPAQ 239
              LL SGQHLL DTYKSMLP Q
Sbjct:   281 SLLGSGQHLLQDTYKSMLPGQ 301


GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA
GO:0005634 "nucleus" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0043565 "sequence-specific DNA binding" evidence=IDA
GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP
UNIPROTKB|E1BMR6 SP8 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9849 sp8a "sp8 transcription factor a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3654 sp8b "sp8 transcription factor b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2443471 Sp8 "trans-acting transcription factor 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LMT4 SP8 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IXZ3 SP8 "Transcription factor Sp8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1C2Z1 E1C2Z1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1307619 Sp8 "Sp8 transcription factor" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2313 sp9 "sp9 transcription factor" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00