Psyllid ID: psy3917

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
MKVSSIVTAVHFIMARSCETEQTTCKKTMNGNKTGENPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
ccccccccEEEEEEEcccccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccEEEEcccccccccEEEEccEEEEEEEccccccccccEEEEcccEEEcHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccEEEEEHHHHHcccccEEEEEEEEEccEEEcccccccccccccEEEEEEEc
ccEcEEEEEEEHEcccccccccccccEEccccccccccccccEEEEEEcccccccHHHHHHHHcccccEEEEccccccccEEEEEccEEEEEccccHHHHccccEEEEccccEEcHHHHHHHHHHHHccccccHHHcEEEEcccEEccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccEHHHHcccHHHHcEcccHHHHHHHHHcccEccccccEcEEEcEEHHHHHHHHHHHcccEEEEEccHHHHHccEEEEEEEEEEccEEcccccccHHHHcccEEEEEccc
MKVSSIVTAVHFIMARSCETEqttckktmngnktgenpklhKVTVVLGaqwgdegkgkVVDMLAVDADLVcrcqggnnaghtvvvdsteydfhlvpsgiinpkaksiigngvvihlpGLFDELQKNENkgltgwkdrllisdRAHLVFDFHQQVDGLqeaekgkkslgttkkgigpaysskatrnGIRIADLlgdfnvftekdseIGDKLQRIGNevgvttkrkrrcgwldipllkytsmVNGYTKLCITKLDILDTFEEIKIGVAYkrhgktlhyfpsnsselaKVEYYVLIKV
MKVSSIVTAVHFimarsceteqttckktmngnktgenpklhKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVdglqeaekgkkslgttkkgigpaysskatrnGIRIADLLGDFNVFTekdseigdklqrignevgvttkrkrrcgwldipllkytsmvnGYTKLCITKLDILDTFEEIKIGVAYKRHGKtlhyfpsnsselakveyYVLIKV
MKVSSIVTAVHFIMARSCETEQTTCKKTMNGNKTGENPKLHKVTVVLGAQWGDEGKGKvvdmlavdadlvCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEkgkkslgttkkgigPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
*****IVTAVHFIMARSCET*******************LHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVD***************************TRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLI**
*******************************************TVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGL*********LGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
MKVSSIVTAVHFIMARSCETEQTTCKKTMNGNKTGENPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
*KVSSIVTAVHFIMARSCE****TCKKTMN*******PKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKVSSIVTAVHFIMARSCETEQTTCKKTMNGNKTGENPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLIKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query295 2.2.26 [Sep-21-2011]
Q17G75 457 Adenylosuccinate syntheta N/A N/A 0.6 0.387 0.779 2e-77
B0W9B4 458 Adenylosuccinate syntheta N/A N/A 0.6 0.386 0.774 3e-77
B4K8W7 448 Adenylosuccinate syntheta N/A N/A 0.549 0.361 0.781 7e-73
B4II68 447 Adenylosuccinate syntheta N/A N/A 0.549 0.362 0.781 1e-72
B3P321 447 Adenylosuccinate syntheta N/A N/A 0.549 0.362 0.781 1e-72
Q9Y0Y2 447 Adenylosuccinate syntheta yes N/A 0.549 0.362 0.781 1e-72
B3M343 448 Adenylosuccinate syntheta N/A N/A 0.549 0.361 0.775 2e-72
B4LWK0 448 Adenylosuccinate syntheta N/A N/A 0.549 0.361 0.775 5e-72
B4NFS5 449 Adenylosuccinate syntheta N/A N/A 0.555 0.365 0.769 6e-72
B4JUE4 452 Adenylosuccinate syntheta N/A N/A 0.549 0.358 0.769 1e-71
>sp|Q17G75|PURA_AEDAE Adenylosuccinate synthetase OS=Aedes aegypti GN=AAEL003161 PE=3 SV=1 Back     alignment and function desciption
 Score =  289 bits (739), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 138/177 (77%), Positives = 154/177 (87%)

Query: 37  NPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVP 96
           NP   KVTVVLGAQWGDEGKGKVVDMLA +AD+VCRCQGGNNAGHTVVV+  ++DFHL+P
Sbjct: 30  NPYRSKVTVVLGAQWGDEGKGKVVDMLATEADVVCRCQGGNNAGHTVVVNGKDFDFHLLP 89

Query: 97  SGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDG 156
           SGIIN K  SIIGNGVVIHLPGLFDEL KNE KGLT W+ RL+IS+RAHLVFD HQQVDG
Sbjct: 90  SGIINDKCTSIIGNGVVIHLPGLFDELAKNEAKGLTNWESRLVISNRAHLVFDLHQQVDG 149

Query: 157 LQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRI 213
           LQEAEKG KSLGTTKKGIGP YSSKATRNGIR++DLLGDF VF+EK   + +  +R+
Sbjct: 150 LQEAEKGGKSLGTTKKGIGPCYSSKATRNGIRVSDLLGDFKVFSEKFESLVNMYKRL 206
Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.
Aedes aegypti (taxid: 7159)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 4
>sp|B0W9B4|PURA_CULQU Adenylosuccinate synthetase OS=Culex quinquefasciatus GN=CPIJ003725 PE=3 SV=1 Back     alignment and function description
>sp|B4K8W7|PURA_DROMO Adenylosuccinate synthetase OS=Drosophila mojavensis GN=GI22153 PE=3 SV=1 Back     alignment and function description
>sp|B4II68|PURA_DROSE Adenylosuccinate synthetase OS=Drosophila sechellia GN=GM23154 PE=3 SV=1 Back     alignment and function description
>sp|B3P321|PURA_DROER Adenylosuccinate synthetase OS=Drosophila erecta GN=GG15093 PE=3 SV=1 Back     alignment and function description
>sp|Q9Y0Y2|PURA_DROME Adenylosuccinate synthetase OS=Drosophila melanogaster GN=CG17273 PE=2 SV=1 Back     alignment and function description
>sp|B3M343|PURA_DROAN Adenylosuccinate synthetase OS=Drosophila ananassae GN=GF17012 PE=3 SV=1 Back     alignment and function description
>sp|B4LWK0|PURA_DROVI Adenylosuccinate synthetase OS=Drosophila virilis GN=GJ24271 PE=3 SV=1 Back     alignment and function description
>sp|B4NFS5|PURA_DROWI Adenylosuccinate synthetase OS=Drosophila willistoni GN=GK22693 PE=3 SV=1 Back     alignment and function description
>sp|B4JUE4|PURA_DROGR Adenylosuccinate synthetase OS=Drosophila grimshawi GN=GH15927 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
270010878348 hypothetical protein TcasGA2_TC015922 [T 0.837 0.709 0.625 4e-87
91094097 403 PREDICTED: similar to adenylosuccinate s 0.837 0.612 0.545 2e-85
395748867 467 PREDICTED: LOW QUALITY PROTEIN: adenylos 0.840 0.531 0.562 2e-78
328698278 431 PREDICTED: adenylosuccinate synthetase-l 0.633 0.433 0.764 1e-77
307199088 451 Adenylosuccinate synthetase [Harpegnatho 0.677 0.443 0.683 4e-76
307183985 448 Adenylosuccinate synthetase [Camponotus 0.606 0.399 0.755 1e-75
157134880 457 adenylosuccinate synthetase [Aedes aegyp 0.6 0.387 0.779 1e-75
170034876 458 adenylosuccinate synthetase [Culex quinq 0.6 0.386 0.774 2e-75
357612121 426 adenylosuccinate synthetase [Danaus plex 0.586 0.406 0.780 5e-75
347969836 466 AGAP003405-PA [Anopheles gambiae str. PE 0.566 0.358 0.796 5e-74
>gi|270010878|gb|EFA07326.1| hypothetical protein TcasGA2_TC015922 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 164/262 (62%), Positives = 194/262 (74%), Gaps = 15/262 (5%)

Query: 42  KVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIIN 101
           KV V+LGAQWGDEGKGKVVDMLA   D+VCRCQGGNNAGHTVV++  EYDFHL+PSGII+
Sbjct: 29  KVIVILGAQWGDEGKGKVVDMLAETVDIVCRCQGGNNAGHTVVIEGVEYDFHLLPSGIIH 88

Query: 102 PKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAE 161
           PK  S+IGNGVVIHLPGLF+E++KNE KGL  W+ RL+ISDRAHLVFDFHQQVDGLQE E
Sbjct: 89  PKCHSVIGNGVVIHLPGLFEEVEKNEKKGLKDWESRLIISDRAHLVFDFHQQVDGLQEQE 148

Query: 162 KGKKSLGTTKKGIGPAYSSKATRNGI-----RIADLLGDFNVF----------TEKDSEI 206
             +K  GT         S      G+     RI +++G    +          TE   +I
Sbjct: 149 NTQKGQGTYPYVTSSNCSVGGVCTGLGLSPNRIGEVIGVVKAYTTRVGDGPFPTELRDKI 208

Query: 207 GDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVA 266
           GD LQ  G EVGVTTKRKRRCGWLD+ LL+YT++VNGYT LC+TKLDILDT  EIK+GV 
Sbjct: 209 GDCLQERGAEVGVTTKRKRRCGWLDVFLLQYTNIVNGYTALCLTKLDILDTLPEIKLGVG 268

Query: 267 YKRHGKTLHYFPSNSSELAKVE 288
           YK  GK + YFPS+++ELA+VE
Sbjct: 269 YKLKGKKIDYFPSSAAELAEVE 290

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91094097|ref|XP_967036.1| PREDICTED: similar to adenylosuccinate synthetase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|395748867|ref|XP_003778845.1| PREDICTED: LOW QUALITY PROTEIN: adenylosuccinate synthetase isozyme 2-like [Pongo abelii] Back     alignment and taxonomy information
>gi|328698278|ref|XP_001950238.2| PREDICTED: adenylosuccinate synthetase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307199088|gb|EFN79798.1| Adenylosuccinate synthetase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307183985|gb|EFN70556.1| Adenylosuccinate synthetase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|157134880|ref|XP_001656488.1| adenylosuccinate synthetase [Aedes aegypti] gi|122118348|sp|Q17G75.1|PURA_AEDAE RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase gi|108881348|gb|EAT45573.1| AAEL003161-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170034876|ref|XP_001845298.1| adenylosuccinate synthetase [Culex quinquefasciatus] gi|308191517|sp|B0W9B4.1|PURA_CULQU RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase gi|167876591|gb|EDS39974.1| adenylosuccinate synthetase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|357612121|gb|EHJ67814.1| adenylosuccinate synthetase [Danaus plexippus] Back     alignment and taxonomy information
>gi|347969836|ref|XP_311692.5| AGAP003405-PA [Anopheles gambiae str. PEST] gi|333467613|gb|EAA07403.5| AGAP003405-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
FB|FBgn0027493 447 CG17273 [Drosophila melanogast 0.559 0.369 0.648 3.5e-86
ZFIN|ZDB-GENE-050417-337 455 adss "adenylosuccinate synthas 0.586 0.380 0.592 1.5e-81
UNIPROTKB|F1Q4F5 456 ADSS "Adenylosuccinate synthet 0.623 0.403 0.554 4e-81
RGD|1310508 456 Adss "adenylosuccinate synthas 0.596 0.385 0.569 6.5e-81
UNIPROTKB|Q5ZJL5 451 ADSS "Adenylosuccinate synthet 0.620 0.405 0.566 1.4e-80
UNIPROTKB|A7MBG0 456 ADSS "Adenylosuccinate synthet 0.657 0.425 0.534 2.2e-80
UNIPROTKB|A4Z6H1 456 ADSS "Adenylosuccinate synthet 0.596 0.385 0.569 2.8e-80
MGI|MGI:87948 456 Adss "adenylosuccinate synthet 0.586 0.379 0.573 3.6e-80
UNIPROTKB|P30520 456 ADSS "Adenylosuccinate synthet 0.596 0.385 0.569 1.2e-79
ZFIN|ZDB-GENE-020419-28 468 adssl "adenylosuccinate syntha 0.596 0.376 0.587 2.5e-79
FB|FBgn0027493 CG17273 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 563 (203.2 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
 Identities = 107/165 (64%), Positives = 122/165 (73%)

Query:    42 KVTVVLGAQWGDEGKGKXXXXXXXXXXXXCRCQGGNNAGHTVVVDSTEYDFHLVPSGIIN 101
             KV VVLGAQWGDEGKGK            CRCQGGNNAGHTVV + TE+DFHL+PSG++N
Sbjct:    25 KVDVVLGAQWGDEGKGKVVDMLASDVDIVCRCQGGNNAGHTVVANGTEFDFHLLPSGVVN 84

Query:   102 PKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAE 161
              K  S+IGNGVVIHLP LFDE+ KNE KGL   ++RL+ISDRAHLVFDFHQ VDG+QEAE
Sbjct:    85 EKCVSVIGNGVVIHLPSLFDEVLKNEAKGLQHLENRLIISDRAHLVFDFHQHVDGMQEAE 144

Query:   162 XXXXXXXXXXXXXXPAYSSKATRNGIRIADLLGDFNVFTEKDSEI 206
                           PAYSSKATRNGIR+ +LLGDFN+F+EK   I
Sbjct:   145 KGGKSLGTTKKGIGPAYSSKATRNGIRVGELLGDFNLFSEKFKSI 189
GO:0004019 "adenylosuccinate synthase activity" evidence=ISS;NAS
GO:0006164 "purine nucleotide biosynthetic process" evidence=IEA;NAS
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0005525 "GTP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0022008 "neurogenesis" evidence=IMP
ZFIN|ZDB-GENE-050417-337 adss "adenylosuccinate synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q4F5 ADSS "Adenylosuccinate synthetase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1310508 Adss "adenylosuccinate synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZJL5 ADSS "Adenylosuccinate synthetase isozyme 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBG0 ADSS "Adenylosuccinate synthetase isozyme 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A4Z6H1 ADSS "Adenylosuccinate synthetase isozyme 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:87948 Adss "adenylosuccinate synthetase, non muscle" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P30520 ADSS "Adenylosuccinate synthetase isozyme 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020419-28 adssl "adenylosuccinate synthase, like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6BUG5PURA_DEBHA6, ., 3, ., 4, ., 40.62740.50840.3496yesN/A
P0CQ34PURA_CRYNJ6, ., 3, ., 4, ., 40.60860.52540.3604yesN/A
P46664PURA2_MOUSE6, ., 3, ., 4, ., 40.67970.58640.3793yesN/A
C5DYR7PURA_ZYGRC6, ., 3, ., 4, ., 40.60120.51860.3517yesN/A
Q568F6PURA2_DANRE6, ., 3, ., 4, ., 40.73650.54910.3560yesN/A
Q6FMU9PURA_CANGA6, ., 3, ., 4, ., 40.59490.51860.3541yesN/A
A5PJR4PURA1_BOVIN6, ., 3, ., 4, ., 40.66150.64400.4157yesN/A
Q299D3PURA_DROPS6, ., 3, ., 4, ., 40.78260.53550.3526yesN/A
A4Z6H1PURA2_PIG6, ., 3, ., 4, ., 40.67400.59660.3859yesN/A
P30520PURA2_HUMAN6, ., 3, ., 4, ., 40.67400.59660.3859yesN/A
Q02787PURA_SCHPO6, ., 3, ., 4, ., 40.61870.53890.3663yesN/A
Q9Y0Y2PURA_DROME6, ., 3, ., 4, ., 40.78180.54910.3624yesN/A
Q5ZJL5PURA2_CHICK6, ., 3, ., 4, ., 40.69100.58640.3835yesN/A
Q6DIW6PURA1_XENTR6, ., 3, ., 4, ., 40.68750.58640.3827yesN/A
C4R8E8PURA_PICPG6, ., 3, ., 4, ., 40.55610.59660.4112yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.4.40.914
3rd Layer6.3.40.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
cd03108 363 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) 6e-92
pfam00709 420 pfam00709, Adenylsucc_synt, Adenylosuccinate synth 2e-85
smart00788 417 smart00788, Adenylsucc_synt, Adenylosuccinate synt 1e-83
PTZ00350 436 PTZ00350, PTZ00350, adenylosuccinate synthetase; P 2e-79
PLN02513 427 PLN02513, PLN02513, adenylosuccinate synthase 4e-79
PRK01117 430 PRK01117, PRK01117, adenylosuccinate synthetase; P 7e-75
COG0104 430 COG0104, PurA, Adenylosuccinate synthase [Nucleoti 3e-73
TIGR00184 425 TIGR00184, purA, adenylosuccinate synthase 8e-61
PRK13788 404 PRK13788, PRK13788, adenylosuccinate synthetase; P 5e-47
PRK13785 454 PRK13785, PRK13785, adenylosuccinate synthetase; P 3e-44
PRK13787 423 PRK13787, PRK13787, adenylosuccinate synthetase; P 3e-43
cd03108363 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) 2e-42
pfam00709420 pfam00709, Adenylsucc_synt, Adenylosuccinate synth 9e-42
smart00788417 smart00788, Adenylsucc_synt, Adenylosuccinate synt 9e-42
PRK13783 404 PRK13783, PRK13783, adenylosuccinate synthetase; P 9e-41
PRK01117430 PRK01117, PRK01117, adenylosuccinate synthetase; P 1e-40
PRK13786 424 PRK13786, PRK13786, adenylosuccinate synthetase; P 8e-40
PRK13784 428 PRK13784, PRK13784, adenylosuccinate synthetase; P 2e-37
COG0104430 COG0104, PurA, Adenylosuccinate synthase [Nucleoti 3e-36
PTZ00350436 PTZ00350, PTZ00350, adenylosuccinate synthetase; P 5e-33
PLN02513427 PLN02513, PLN02513, adenylosuccinate synthase 3e-30
TIGR00184425 TIGR00184, purA, adenylosuccinate synthase 2e-29
PRK04293333 PRK04293, PRK04293, adenylosuccinate synthetase; P 6e-24
PRK13786424 PRK13786, PRK13786, adenylosuccinate synthetase; P 9e-24
PRK13783404 PRK13783, PRK13783, adenylosuccinate synthetase; P 3e-22
PRK13787423 PRK13787, PRK13787, adenylosuccinate synthetase; P 2e-19
PRK13784428 PRK13784, PRK13784, adenylosuccinate synthetase; P 1e-15
PTZ00351 710 PTZ00351, PTZ00351, adenylosuccinate synthetase; P 1e-15
PRK13788404 PRK13788, PRK13788, adenylosuccinate synthetase; P 6e-15
PRK13785454 PRK13785, PRK13785, adenylosuccinate synthetase; P 6e-15
PRK04293333 PRK04293, PRK04293, adenylosuccinate synthetase; P 1e-07
>gnl|CDD|239382 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP Back     alignment and domain information 
 Score =  276 bits (709), Expect = 6e-92
 Identities = 94/150 (62%), Positives = 114/150 (76%), Gaps = 1/150 (0%)

Query: 43  VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINP 102
           VTVV+GAQWGDEGKGK+VD+LA  AD+V R QGGNNAGHTVVV+  ++  HL+PSGI+NP
Sbjct: 1   VTVVVGAQWGDEGKGKIVDLLAERADIVVRFQGGNNAGHTVVVNGKKFKLHLLPSGILNP 60

Query: 103 KAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEK 162
               +IGNGVVI  P LF+E+ + E KG      RL ISDRAHLVF +H  +DGL+E  +
Sbjct: 61  GVTCVIGNGVVIDPPALFEEIDELEKKGG-DVTGRLFISDRAHLVFPYHILLDGLREEAR 119

Query: 163 GKKSLGTTKKGIGPAYSSKATRNGIRIADL 192
           GKK +GTTK+GIGPAY  KA R GIR+ DL
Sbjct: 120 GKKKIGTTKRGIGPAYEDKAARRGIRVGDL 149

IMP and L-aspartate are conjugated in a two-step reaction accompanied by the hydrolysis of GTP to GDP in the presence of Mg2+. In the first step, the r-phosphate group of GTP is transferred to the 6-oxygen atom of IMP. An aspartate then displaces this 6-phosphate group to form the product adenylosuccinate. Because of its critical role in purine biosynthesis, AdSS is a target of antibiotics, herbicides and antitumor drugs. Length = 363
>gnl|CDD|216073 pfam00709, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|197875 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|240376 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase Back     alignment and domain information
>gnl|CDD|234904 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223182 COG0104, PurA, Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|232863 TIGR00184, purA, adenylosuccinate synthase Back     alignment and domain information
>gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237506 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|239382 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP Back     alignment and domain information
>gnl|CDD|216073 pfam00709, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|197875 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|237505 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234904 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223182 COG0104, PurA, Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|240376 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase Back     alignment and domain information
>gnl|CDD|232863 TIGR00184, purA, adenylosuccinate synthase Back     alignment and domain information
>gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237505 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237506 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 295
COG0104430 PurA Adenylosuccinate synthase [Nucleotide transpo 100.0
TIGR00184425 purA adenylosuccinate synthase. Alternate name IMP 100.0
PRK13786424 adenylosuccinate synthetase; Provisional 100.0
PRK13787423 adenylosuccinate synthetase; Provisional 100.0
PLN02513427 adenylosuccinate synthase 100.0
PRK13784428 adenylosuccinate synthetase; Provisional 100.0
PTZ00350436 adenylosuccinate synthetase; Provisional 100.0
PRK01117430 adenylosuccinate synthetase; Provisional 100.0
cd03108363 AdSS Adenylosuccinate synthetase (AdSS) catalyzes 100.0
smart00788421 Adenylsucc_synt Adenylosuccinate synthetase. Adeny 100.0
PRK13783404 adenylosuccinate synthetase; Provisional 100.0
PRK13785454 adenylosuccinate synthetase; Provisional 100.0
PF00709421 Adenylsucc_synt: Adenylosuccinate synthetase; Inte 100.0
PRK13788404 adenylosuccinate synthetase; Provisional 100.0
KOG1355|consensus455 100.0
PTZ00351710 adenylosuccinate synthetase; Provisional 100.0
PRK04293333 adenylosuccinate synthetase; Provisional 100.0
>COG0104 PurA Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-104  Score=765.98  Aligned_cols=251  Identities=52%  Similarity=0.876  Sum_probs=242.3

Q ss_pred             ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917          41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF  120 (295)
Q Consensus        41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~  120 (295)
                      |++++|||+|||||||||||||||.++|+|||||||+||||||+++|++|+|||||||+++|++.++|||||||||++|+
T Consensus         1 m~~~VVvG~QWGDEGKGKIvD~L~~~~d~VvR~qGG~NAGHTvvv~g~~~~LhLiPSGil~~~~~~vIGnGvVvdP~~L~   80 (430)
T COG0104           1 MMNVVVVGAQWGDEGKGKIVDYLADRADVVVRYQGGHNAGHTVVVNGEKYKLHLIPSGILRPGATLVIGNGVVVDPEVLL   80 (430)
T ss_pred             CceEEEEeCccccCCCceeeeeeccCcCEEEEccCCCCCCcEEEECCEEEEEEeccccccCCCceEEEcCcEEECHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917         121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT  200 (295)
Q Consensus       121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~  200 (295)
                      +||+.|+++|+....+||+||+|||||+|||+++|+++|..++.++||||||||||||+||++|+|||++||+ |++.|+
T Consensus        81 ~Ei~~L~~~g~~~~~~rL~Is~~ahlIlpyH~~lD~~~E~~~~~~kIGTTgrGIGPaY~DKv~R~giRv~DL~-d~~~l~  159 (430)
T COG0104          81 KEIEELEERGVDVVRDRLRISDRAHLILPYHIELDRAREKALGKKKIGTTGRGIGPAYEDKVARRGIRVGDLL-DPETLR  159 (430)
T ss_pred             HHHHHHHhcCCccccccEEEccCcccccHHHHHHhhhhhhhcCCCcccCCCCccChhhhhhHhhhhhhhhhhc-CHHHHH
Confidence            9999999999987668999999999999999999999998888889999999999999999999999999999 545443


Q ss_pred             c-------------------------------------------------------------------------------
Q psy3917         201 E-------------------------------------------------------------------------------  201 (295)
Q Consensus       201 ~-------------------------------------------------------------------------------  201 (295)
                      +                                                                               
T Consensus       160 ~kle~~~~~~n~~l~~~y~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~g~~VLfEGAQG~lLDidhGTYPyV  239 (430)
T COG0104         160 EKLERLLEYKNFQLVKYYGAEAVDFEDILDEYYEYAERLKPYVTDVSVLLNDALDAGKRVLFEGAQGTLLDIDHGTYPYV  239 (430)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhcchhhhhHHHHHHHHHcCCeEEEEcCccceecccCCcCccc
Confidence            3                                                                               


Q ss_pred             -------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHh
Q psy3917         202 -------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYT  238 (295)
Q Consensus       202 -------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya  238 (295)
                                                                 +++|+|++|++.|+||||||||||||||||++++|||
T Consensus       240 TSSNttagg~~~gsGvgP~~i~~ViGV~KAYtTRVG~GPFPTEl~de~ge~l~~~G~EyGttTGR~RRcGWfD~v~~r~A  319 (430)
T COG0104         240 TSSNTTAGGVATGSGVGPTKIDYVIGVFKAYTTRVGEGPFPTELFDEVGEKLREVGHEYGTTTGRPRRCGWFDAVLLRYA  319 (430)
T ss_pred             ccCCcchhheeccCCCCccccceEEEEEEEeeccccCCCCCcccchHHHHHHhhcCceecccCCCCccccchhHHHHHHH
Confidence                                                       7788999999999999999999999999999999999


Q ss_pred             hHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917         239 SMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL  292 (295)
Q Consensus       239 ~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~  292 (295)
                      +++||+|++||||||+|++|++||||++|++||+++++||+++++|++|+|+|.
T Consensus       320 ~~iNG~t~laiTKlDvLdgl~~ikiCv~Y~~dG~~id~~P~~~~~~~~~~PiYe  373 (430)
T COG0104         320 VRINGITGLAITKLDVLDGLDEIKICVAYEIDGKRIDYFPADLDDLARCEPIYE  373 (430)
T ss_pred             HhhcCccceeeeeeehhcCCCcceeEEEEecCCceeeecccchhhhhcCceeee
Confidence            999999999999999999999999999999999999999999999999999995

>TIGR00184 purA adenylosuccinate synthase Back     alignment and domain information
>PRK13786 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK13787 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PLN02513 adenylosuccinate synthase Back     alignment and domain information
>PRK13784 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PTZ00350 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK01117 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>cd03108 AdSS Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP Back     alignment and domain information
>smart00788 Adenylsucc_synt Adenylosuccinate synthetase Back     alignment and domain information
>PRK13783 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK13785 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PF00709 Adenylsucc_synt: Adenylosuccinate synthetase; InterPro: IPR001114 Adenylosuccinate synthetase (6 Back     alignment and domain information
>PRK13788 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>KOG1355|consensus Back     alignment and domain information
>PTZ00351 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK04293 adenylosuccinate synthetase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
2v40_A 459 Human Adenylosuccinate Synthetase Isozyme 2 In Comp 1e-54
2v40_A459 Human Adenylosuccinate Synthetase Isozyme 2 In Comp 1e-26
1j4b_A 457 Recombinant Mouse-muscle Adenylosuccinate Synthetas 1e-54
1j4b_A457 Recombinant Mouse-muscle Adenylosuccinate Synthetas 2e-26
1dj2_A 443 Structures Of Adenylosuccinate Synthetase From Trit 2e-39
1dj2_A443 Structures Of Adenylosuccinate Synthetase From Trit 8e-17
1dj3_A 442 Structures Of Adenylosuccinate Synthetase From Trit 3e-35
1dj3_A442 Structures Of Adenylosuccinate Synthetase From Trit 5e-17
1p9b_A 442 Structure Of Fully Ligated Adenylosuccinate Synthet 1e-28
1p9b_A442 Structure Of Fully Ligated Adenylosuccinate Synthet 4e-13
1cg0_A 431 Structure Of Adenylosuccinate Synthetase From E. Co 9e-28
1cg0_A431 Structure Of Adenylosuccinate Synthetase From E. Co 2e-11
1kjx_A 432 Imp Complex Of E. Coli Adenylosuccinate Synthetase 9e-28
1kjx_A432 Imp Complex Of E. Coli Adenylosuccinate Synthetase 2e-11
1hon_A 431 Structure Of Guanine Nucleotide (Gppcp) Complex Of 9e-28
1hon_A431 Structure Of Guanine Nucleotide (Gppcp) Complex Of 2e-11
1cg4_A 431 Structure Of The Mutant (R303l) Of Adenylosuccinate 9e-28
1cg4_A431 Structure Of The Mutant (R303l) Of Adenylosuccinate 2e-10
1cg1_A 431 Structure Of The Mutant (K16q) Of Adenylosuccinate 2e-27
1cg1_A431 Structure Of The Mutant (K16q) Of Adenylosuccinate 2e-11
1cg3_A 431 Structure Of The Mutant (R143l) Of Adenylosuccinate 8e-27
1cg3_A431 Structure Of The Mutant (R143l) Of Adenylosuccinate 2e-11
3hid_A 432 Crystal Structure Of Adenylosuccinate Synthetase Fr 4e-25
3hid_A432 Crystal Structure Of Adenylosuccinate Synthetase Fr 2e-12
3r7t_A 419 Crystal Structure Of Adenylosuccinate Synthetase Fr 2e-24
3r7t_A419 Crystal Structure Of Adenylosuccinate Synthetase Fr 7e-18
3ue9_A 452 Crystal Structure Of Adenylosuccinate Synthetase (A 3e-22
3ue9_A452 Crystal Structure Of Adenylosuccinate Synthetase (A 5e-15
2d7u_A339 Crystal Structure Of Hypothetical Adenylosuccinate 4e-12
2d7u_A339 Crystal Structure Of Hypothetical Adenylosuccinate 6e-06
>pdb|2V40|A Chain A, Human Adenylosuccinate Synthetase Isozyme 2 In Complex With Gdp Length = 459 Back     alignment and structure 
Iteration: 1

 Score =  209 bits (533), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 38  PKLHKVTVVLGAQWGDEGKGKXXXXXXXXXXXXCRCQGGNNAGHTVVVDSTEYDFHLVPS 97
           P  ++VTVVLGAQWGDEGKGK            CRCQGGNNAGHTVVVDS EYDFHL+PS
Sbjct: 28  PGGNRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVVVDSVEYDFHLLPS 87
Query: 98  GIINPKAKSIIGNGVVIHLPGLFDELQKN--ENKGLTGWKDRLLISDRAHLVFDFHQQVD 155
           GIINP   + IGNGVVIHLPGLF+E +KN  + KGL GW+ RL+ISDRAH+VFDFHQ  D
Sbjct: 88  GIINPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAAD 147
Query: 156 GLQE---AEXXXXXXXXXXXXXXPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQR 212
           G+QE    E              P YSSKA R+G+R+ DL+ DF+ F+E+   + ++ + 
Sbjct: 148 GIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYKS 207
Query: 213 I 213
           I
Sbjct: 208 I 208
>pdb|2V40|A Chain A, Human Adenylosuccinate Synthetase Isozyme 2 In Complex With Gdp Length = 459 Back     alignment and structure
>pdb|1J4B|A Chain A, Recombinant Mouse-muscle Adenylosuccinate Synthetase Length = 457 Back     alignment and structure
>pdb|1J4B|A Chain A, Recombinant Mouse-muscle Adenylosuccinate Synthetase Length = 457 Back     alignment and structure
>pdb|1DJ2|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 443 Back     alignment and structure
>pdb|1DJ2|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 443 Back     alignment and structure
>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 442 Back     alignment and structure
>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 442 Back     alignment and structure
>pdb|1P9B|A Chain A, Structure Of Fully Ligated Adenylosuccinate Synthetase From Plasmodium Falciparum Length = 442 Back     alignment and structure
>pdb|1P9B|A Chain A, Structure Of Fully Ligated Adenylosuccinate Synthetase From Plasmodium Falciparum Length = 442 Back     alignment and structure
>pdb|1CG0|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG0|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1KJX|A Chain A, Imp Complex Of E. Coli Adenylosuccinate Synthetase Length = 432 Back     alignment and structure
>pdb|1KJX|A Chain A, Imp Complex Of E. Coli Adenylosuccinate Synthetase Length = 432 Back     alignment and structure
>pdb|1HON|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of Adenylosuccinate Synthetase From Escherichia Coli At Ph 6.5 And 25 Degree Celsius Length = 431 Back     alignment and structure
>pdb|1HON|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of Adenylosuccinate Synthetase From Escherichia Coli At Ph 6.5 And 25 Degree Celsius Length = 431 Back     alignment and structure
>pdb|1CG4|A Chain A, Structure Of The Mutant (R303l) Of Adenylosuccinate Synthetase From E. Coli Complexed With, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG4|A Chain A, Structure Of The Mutant (R303l) Of Adenylosuccinate Synthetase From E. Coli Complexed With, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG1|A Chain A, Structure Of The Mutant (K16q) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG1|A Chain A, Structure Of The Mutant (K16q) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG3|A Chain A, Structure Of The Mutant (R143l) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG3|A Chain A, Structure Of The Mutant (R143l) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|3HID|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Yersinia Pestis Co92 Length = 432 Back     alignment and structure
>pdb|3HID|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Yersinia Pestis Co92 Length = 432 Back     alignment and structure
>pdb|3R7T|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Campylobacter Jejuni Length = 419 Back     alignment and structure
>pdb|3R7T|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Campylobacter Jejuni Length = 419 Back     alignment and structure
>pdb|3UE9|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase) (Pura) From Burkholderia Thailandensis Length = 452 Back     alignment and structure
>pdb|3UE9|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase) (Pura) From Burkholderia Thailandensis Length = 452 Back     alignment and structure
>pdb|2D7U|A Chain A, Crystal Structure Of Hypothetical Adenylosuccinate Synthetase, Ph0438 From Pyrococcus Horikoshii Ot3 Length = 339 Back     alignment and structure
>pdb|2D7U|A Chain A, Crystal Structure Of Hypothetical Adenylosuccinate Synthetase, Ph0438 From Pyrococcus Horikoshii Ot3 Length = 339 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
2v40_A 459 Adenylosuccinate synthetase isozyme 2; ligase, pur 2e-96
2v40_A459 Adenylosuccinate synthetase isozyme 2; ligase, pur 6e-43
1dj2_A 443 Adenylosuccinate synthetase; GDP, ligase; HET: GDP 1e-94
1dj2_A443 Adenylosuccinate synthetase; GDP, ligase; HET: GDP 1e-41
1p9b_A 442 Adenylosuccinate synthetase; ligase; HET: IMO GDP; 3e-94
1p9b_A442 Adenylosuccinate synthetase; ligase; HET: IMO GDP; 3e-39
3r7t_A 419 Adenylosuccinate synthetase; structural genomics, 4e-83
3r7t_A419 Adenylosuccinate synthetase; structural genomics, 4e-38
3ue9_A 452 Adenylosuccinate synthetase; ssgcid, ligase, ADSS, 3e-80
3ue9_A452 Adenylosuccinate synthetase; ssgcid, ligase, ADSS, 7e-38
3hid_A 432 Adenylosuccinate synthetase; niaid structural geno 4e-79
3hid_A432 Adenylosuccinate synthetase; niaid structural geno 1e-37
2d7u_A339 Adenylosuccinate synthetase; structural genomics, 7e-75
2d7u_A339 Adenylosuccinate synthetase; structural genomics, 7e-21
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* Length = 459 Back     alignment and structure
 Score =  290 bits (745), Expect = 2e-96
 Identities = 121/182 (66%), Positives = 148/182 (81%), Gaps = 5/182 (2%)

Query: 37  NPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVP 96
            P  ++VTVVLGAQWGDEGKGKVVD+LA DAD+VCRCQGGNNAGHTVVVDS EYDFHL+P
Sbjct: 27  RPGGNRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVVVDSVEYDFHLLP 86

Query: 97  SGIINPKAKSIIGNGVVIHLPGLFDELQKNENKG--LTGWKDRLLISDRAHLVFDFHQQV 154
           SGIINP   + IGNGVVIHLPGLF+E +KN  KG  L GW+ RL+ISDRAH+VFDFHQ  
Sbjct: 87  SGIINPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAA 146

Query: 155 DGLQEAEKGK---KSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQ 211
           DG+QE ++ +   K+LGTTKKGIGP YSSKA R+G+R+ DL+ DF+ F+E+   + ++ +
Sbjct: 147 DGIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYK 206

Query: 212 RI 213
            I
Sbjct: 207 SI 208
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* Length = 459 Back     alignment and structure
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A* Length = 443 Back     alignment and structure
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A* Length = 443 Back     alignment and structure
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10 Length = 442 Back     alignment and structure
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10 Length = 442 Back     alignment and structure
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} Length = 419 Back     alignment and structure
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} Length = 419 Back     alignment and structure
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis} Length = 452 Back     alignment and structure
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis} Length = 452 Back     alignment and structure
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ... Length = 432 Back     alignment and structure
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ... Length = 432 Back     alignment and structure
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii} Length = 339 Back     alignment and structure
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii} Length = 339 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
1dj2_A443 Adenylosuccinate synthetase; GDP, ligase; HET: GDP 100.0
3hid_A432 Adenylosuccinate synthetase; niaid structural geno 100.0
3ue9_A452 Adenylosuccinate synthetase; ssgcid, ligase, ADSS, 100.0
2v40_A459 Adenylosuccinate synthetase isozyme 2; ligase, pur 100.0
1p9b_A442 Adenylosuccinate synthetase; ligase; HET: IMO GDP; 100.0
3r7t_A419 Adenylosuccinate synthetase; structural genomics, 100.0
2d7u_A339 Adenylosuccinate synthetase; structural genomics, 100.0
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-103  Score=769.67  Aligned_cols=263  Identities=51%  Similarity=0.890  Sum_probs=242.3

Q ss_pred             ccCCCCCCCCCCCceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEE-ECCEEEEEeeccceeecCCcee
Q psy3917          28 TMNGNKTGENPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVV-VDSTEYDFHLVPSGIINPKAKS  106 (295)
Q Consensus        28 ~~~~~~~~~~~~~m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv-~~g~k~~l~llPSGil~~~~~~  106 (295)
                      .||.+.+.+.+.++++++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+++|++.|
T Consensus         6 ~~~~~~~~~~~~~~~v~vVvG~QWGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~   85 (443)
T 1dj2_A            6 SAATESLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTC   85 (443)
T ss_dssp             ---------CTTSCSEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEE
T ss_pred             CCCCCCCCCCCCccceEEEEeCCcCCCCCceEEeeeccCCCEEEecCccCCCCcEEEEeCCEEEEEEccCccccCCCceE
Confidence            677777778777778889999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             EEcCCeEechHHHHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccC
Q psy3917         107 IIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNG  186 (295)
Q Consensus       107 ~IG~GvVvdp~~l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~g  186 (295)
                      +||||||+||++|++||+.|+++|++ +.+||+||+|||||+|||+++|+++|..+|.++||||||||||||+||++|+|
T Consensus        86 vIGnGvVvdp~~L~~Ei~~L~~~G~~-v~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTTgrGIGPaY~dK~~R~g  164 (443)
T 1dj2_A           86 VIGNGVVVHLPGLFKEIDGLESNGVS-CKGRILVSDRAHLLFDFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNG  164 (443)
T ss_dssp             EECTTCEECHHHHHHHHHHHHTTTCC-CTTTEEEESSSEECCHHHHHHHHHHHHHSCSCCCCCCSCCHHHHHHHHHHTCC
T ss_pred             EECCcEEEcHHHHHHHHHHHHHcCCC-CCCCEEEcCCCCCCCchHHHHHHHHHHhcCCCCCCCCCCCcHHHhHhhhhccC
Confidence            99999999999999999999999974 45899999999999999999999999999989999999999999999999999


Q ss_pred             ceeeeccCChhhhhc-----------------------------------------------------------------
Q psy3917         187 IRIADLLGDFNVFTE-----------------------------------------------------------------  201 (295)
Q Consensus       187 iRv~DL~~~~~~~~~-----------------------------------------------------------------  201 (295)
                      ||++||+ |++.|++                                                                 
T Consensus       165 iRv~DL~-d~~~~~~kl~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG  243 (443)
T 1dj2_A          165 IRVGDLR-HMDTLPQKLDLLLSDAAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQA  243 (443)
T ss_dssp             CBGGGGG-CTTTHHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             cEeeccc-CHHHHHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEecch
Confidence            9999998 4332211                                                                 


Q ss_pred             --------------------------------------------------------ccchHhHHHhhcCCccccccCCcc
Q psy3917         202 --------------------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKR  225 (295)
Q Consensus       202 --------------------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpR  225 (295)
                                                                              +++|+|+.||++|+||||||||||
T Consensus       244 ~lLDiD~GtYPyVTSSnttagga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~l~~~G~E~GttTGR~R  323 (443)
T 1dj2_A          244 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPR  323 (443)
T ss_dssp             GGGCTTTSSTTSSCSSCCSTHHHHHTTTCCTTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBC
T ss_pred             hhhhhccCcCcCCCCCcchHhhhhhccCCCcccCCeEEEEEEecCCcccCCCCCCcCCchhhHHhhhcCCeeCCCCCCCc
Confidence                                                                    667889999999999999999999


Q ss_pred             ccccchHHHHHHhhHhcCcceEEeecccccCCCCceeEEEEEee-CCEEeecCCCCccccCCcEEEEE
Q psy3917         226 RCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKR-HGKTLHYFPSNSSELAKVEYYVL  292 (295)
Q Consensus       226 R~GwlD~~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~-~G~~~~~~P~~~~~l~~~epvy~  292 (295)
                      ||||||++++|||+++||+|+||||||||||+|++||||++|++ ||+++++||++++.|++|||+|.
T Consensus       324 RcGWfD~v~lrya~~inG~t~lalTkLDvLd~~~~ikicv~Y~~~~G~~~~~~P~~~~~l~~~~PvYe  391 (443)
T 1dj2_A          324 RCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYE  391 (443)
T ss_dssp             EEEEEEHHHHHHHHHHHTCSEEEEECGGGGGGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEE
T ss_pred             cCCcchHHHHHHHHHHcCCCeEEEECcCcCCCCCceeEEEEEEcCCCeEeeeCCCChHHhccceEEEE
Confidence            99999999999999999999999999999999999999999999 99999999999999999999995
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} SCOP: c.37.1.10 PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ... Back     alignment and structure
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* Back     alignment and structure
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10 Back     alignment and structure
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} SCOP: c.37.1.0 Back     alignment and structure
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 295
d1iwea_ 430 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-62
d1iwea_430 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 7e-19
d1qf5a_ 431 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 6e-62
d1qf5a_431 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-17
d1p9ba_ 424 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 2e-58
d1p9ba_424 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 4e-13
d1dj2a_ 429 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 2e-56
d1dj2a_429 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 4e-15
>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse (Mus musculus) [TaxId: 10090]} Length = 430 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Adenylosuccinate synthetase, PurA
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  201 bits (512), Expect = 1e-62
 Identities = 123/179 (68%), Positives = 142/179 (79%), Gaps = 3/179 (1%)

Query: 41  HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGII 100
            +VTVVLGAQWGDEGKGKVVD+LA DAD+V RCQGGNNAGHTVVVD  EYDFHL+PSGII
Sbjct: 4   SRVTVVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGII 63

Query: 101 NPKAKSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEA 160
           N KA S IGNGVVIHLPGLF+E +KNE KGL  W+ RL+ISDRAHLVFDFHQ VDGLQE 
Sbjct: 64  NTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQEV 123

Query: 161 EKG---KKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIGDKLQRIGNE 216
           ++     K++GTTKKGIGP YSSKA R G+RI DLL DF+ F+ +   +  + Q +   
Sbjct: 124 QRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQSMFPT 182
>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse (Mus musculus) [TaxId: 10090]} Length = 430 Back     information, alignment and structure
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]} Length = 431 Back     information, alignment and structure
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]} Length = 431 Back     information, alignment and structure
>d1p9ba_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 424 Back     information, alignment and structure
>d1p9ba_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 424 Back     information, alignment and structure
>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 429 Back     information, alignment and structure
>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 429 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
d1iwea_430 Adenylosuccinate synthetase, PurA {Mouse (Mus musc 100.0
d1qf5a_431 Adenylosuccinate synthetase, PurA {Escherichia col 100.0
d1dj2a_429 Adenylosuccinate synthetase, PurA {Mouse-ear cress 100.0
d1p9ba_424 Adenylosuccinate synthetase, PurA {Malaria parasit 100.0
d1a0ia1109 ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 89.53
>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Adenylosuccinate synthetase, PurA
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.3e-101  Score=749.62  Aligned_cols=254  Identities=69%  Similarity=1.116  Sum_probs=241.0

Q ss_pred             CCceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHH
Q psy3917          39 KLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPG  118 (295)
Q Consensus        39 ~~m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~  118 (295)
                      ..+++++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|+++|+|||||||||++
T Consensus         2 ~~~~v~vVvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv~~g~k~~lhllPSGil~~~~~~vIG~GvVidp~~   81 (430)
T d1iwea_           2 TGSRVTVVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPG   81 (430)
T ss_dssp             CCCCEEEEEESSSSCSSHHHHHHHHHTTCSEEEECSBCTTCCEEEECSSCEEEESSSCGGGGCTTSEEEECTTBEECHHH
T ss_pred             CCCcEEEEEcCCcccCcccHHHHhhhcCCCEEEEecCCCCCCcEEEECCEEEEEecCCcEeccCCCcEEECCeEEEcHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhh---hhCCCCcCCCCCCccccccccccccCceeeeccCC
Q psy3917         119 LFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEA---EKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGD  195 (295)
Q Consensus       119 l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~---~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~  195 (295)
                      |++|++.|+++|+....+||+||+|||||+|||+++|+++|.   .++.++||||||||||||+||++|+|||++||+++
T Consensus        82 L~~Ei~~L~~~gv~~~~~rL~Is~rAhli~P~H~~lD~~~E~~~~~~~~~~IGTTgrGIGPaY~DK~~R~gIR~~DL~~~  161 (430)
T d1iwea_          82 LFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSD  161 (430)
T ss_dssp             HHHHHHHHHTTTCCSGGGSEEEETTCEECCHHHHHHHHHHHHHHHHHSSCCCCCCSSSHHHHHHHHHHTCSCBHHHHTSC
T ss_pred             HHHHHHHHHhccccccccceeecccccccCchhhhhhhhhhhhccccccccccccccCcccchhhhhcccccccccccch
Confidence            999999999999976668999999999999999999999885   46788999999999999999999999999999965


Q ss_pred             hhhhhc--------------------------------------------------------------------------
Q psy3917         196 FNVFTE--------------------------------------------------------------------------  201 (295)
Q Consensus       196 ~~~~~~--------------------------------------------------------------------------  201 (295)
                      .+.|++                                                                          
T Consensus       162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~gk~ILfEGAQG~lLDid~GtYP  241 (430)
T d1iwea_         162 FDEFSARFKNLAHQHQSMFPTLEIDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGTYP  241 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHSSCCCEEEECCSCGGGCTTTSSTT
T ss_pred             HHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhhhhccccHHHHHHHHhhccccEEEeecceeeeeccccccC
Confidence            433221                                                                          


Q ss_pred             ---------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHH
Q psy3917         202 ---------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLK  236 (295)
Q Consensus       202 ---------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lr  236 (295)
                                                                   +++|.++.||+.|+||||||||||||||||+|++|
T Consensus       242 ~VTSSnTt~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfpTEl~~e~~~~l~~~g~E~GttTGRpRR~GW~D~v~lr  321 (430)
T d1iwea_         242 FVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILR  321 (430)
T ss_dssp             SSCSSCCSTHHHHHHHTCCGGGEEEEEEEEESSEEECSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHHH
T ss_pred             CCCcCCchHHhhhhcCCCCccccceEEEEeeeeeeeccCCccccccchhhHHHHHhhcCCcccccCCCCcccceecccce
Confidence                                                         66788999999999999999999999999999999


Q ss_pred             HhhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917         237 YTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL  292 (295)
Q Consensus       237 ya~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~  292 (295)
                      ||+++||+|+||||||||||+|++||||++|+++|+.+++||++.++|++|+|+|.
T Consensus       322 ~a~~~ng~~~l~ltklDvL~~~~~ikic~~Y~~~g~~~~~~P~~~~~~~~~~Pvy~  377 (430)
T d1iwea_         322 YAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRIPYFPANQEILQKVEVEYE  377 (430)
T ss_dssp             HHHHHHCCSEEEEECGGGGTTCSEEEEEEEEEETTEECSSCCSSTTHHHHCEEEEE
T ss_pred             eeeecCCcceEEEEeecccccCCceeEEEEEEeCCEEcccCCCChHHhccCeEEEE
Confidence            99999999999999999999999999999999999999999999999999999995
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1p9ba_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1a0ia1 b.40.4.6 (A:241-349) ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure