Psyllid ID: psy4031

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MNSARVTWARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Secondary Structure (PSIPRED)
ccccEEEccccccEEEEEEccccccccccccccccccEEEEEEcccccEEEEEEccccEEEcccccEEEEcccccccEEEEEEccccccccccEEEEEEEcccccccccEEEEEc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEccHHHEEEEEccccccHHHHcccccccEEEEEEEccccccEEEEccccccccccccEEEEEEccccEEEEEEcccccHHccccEEEEEEccHHHHHHccHEEEcc
Coil and Loop (DISEMBL)
MNSARVTWARSRYWHAlyipghrrspydyaaraqprnakvniilpehslvrqihtpypvssqsdgthstyldtagrpmITLRAHNLVENHIEDIEIEYEFSksylgkepllrafe
Flexible Loop (DISEMBL)
mnsarvtwARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTpypvssqsdgtHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEfsksylgkepllrafe
Low Complexity Region (SEG)
MNSARVTWARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Disordered region (IsUnstruct)
*****VTWARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPY***********TYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLG*********
Disordered Region (DISOPRED)
******T*ARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Disordered Region (DISEMBL)
********ARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYP*********STYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Disordered Region (DISPRO)
**SARVTWARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNSARVTWARSRYWHALYIPGHRRSPYDYAARAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q9GMB0	608	Dolichyl-diphosphooligosa	yes	N/A	0.626	0.118	0.5	6e-13
P07153	605	Dolichyl-diphosphooligosa	yes	N/A	0.626	0.119	0.5	9e-13
Q91YQ5	608	Dolichyl-diphosphooligosa	yes	N/A	0.626	0.118	0.5	9e-13
Q5RFB6	607	Dolichyl-diphosphooligosa	yes	N/A	0.626	0.118	0.5	1e-12
P04843	607	Dolichyl-diphosphooligosa	yes	N/A	0.626	0.118	0.5	1e-12
Q4R4T0	607	Dolichyl-diphosphooligosa	N/A	N/A	0.626	0.118	0.5	2e-12
Q9SFX3	614	Dolichyl-diphosphooligosa	yes	N/A	0.617	0.115	0.388	3e-07
Q54C27	460	Dolichyl-diphosphooligosa	yes	N/A	0.652	0.163	0.302	0.0001
B9FDT1	473	Dolichyl-diphosphooligosa	yes	N/A	0.643	0.156	0.306	0.0002
Q0DJC5	615	Dolichyl-diphosphooligosa	yes	N/A	0.617	0.115	0.291	0.0005

>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 371 VKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAHKKNLVEQHIQDIVVHYT 430

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 431 FNKVLMLQEPLL 442

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Sus scrofa (taxid: 9823)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 1EC: 9

>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 368 VKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 427

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 428 FNKVLMLQEPLL 439

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 371 VKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 430

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 431 FNKVLMLQEPLL 442

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   +I +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 370 VKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 429

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 430 FNKVLMLQEPLL 441

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   +I +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 370 VKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 429

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 430 FNKVLMLQEPLL 441

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   +I +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 370 VKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 429

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 430 FNKVLMLQEPLL 441

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V ++LPE S    + TP+ V  QS     ++LD AGRP++ L  +N+V +H + I++ Y+
Sbjct: 369 VQVVLPEGSKDISVTTPFAVK-QSQEIKYSHLDIAGRPVVVLEKNNVVPDHNQHIQVYYK 427

Query: 100 FSKSYLGKEPLL 111
           FS   L  EPL+
Sbjct: 428 FSNINLLSEPLM 439

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: 8

>sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 36  RNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIE 95
            N  + ++LPE +   ++H P+  + QS+    TYLDT GRP++ +   +    +   I+
Sbjct: 358 ENHILKVVLPEGATDIKVHAPFAFT-QSEENRKTYLDTIGRPVVVINIKDTASENYRYIQ 416

Query: 96  IEYEFSKSYLGKEPLL 111
           + Y  S   +  EPLL
Sbjct: 417 VTYNLSSLSIFHEPLL 432

Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 37  NAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEI 96
           +  + ++LPE S   Q   P+ +  Q   T  +YLD  GR  + L+  N+V  H    ++
Sbjct: 375 DLTIKVVLPEGSTSPQAVVPF-LMEQYLETSYSYLDVVGRTTVVLKKRNVVGEHNVPFQV 433

Query: 97  EYEFSKSYLGKEPLL 111
            YEF+  ++  EPL+
Sbjct: 434 YYEFNPIFMLAEPLM 448

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: 8

>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V ++LPE S    I  P+P   + +  +S +LD +GRP++ L   +++  H    ++ Y 
Sbjct: 370 VKVVLPEGSKDIDISVPFPTKQEQEVKYS-HLDISGRPVVVLEKLDVIPEHNLYFQVYYR 428

Query: 100 FSKSYLGKEPLL 111
           F+   L +EP++
Sbjct: 429 FNNISLLREPMM 440

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
346469193	599	hypothetical protein [Amblyomma maculatu	0.634	0.121	0.506	9e-13
405960099	602	Dolichyl-diphosphooligosaccharide--prote	0.626	0.119	0.486	3e-12
312066621	603	ribophorin I family protein [Loa loa] gi	0.660	0.126	0.473	6e-12
340368294	598	PREDICTED: dolichyl-diphosphooligosaccha	0.626	0.120	0.513	6e-12
402592933	603	ribophorin I family protein [Wuchereria	0.686	0.131	0.481	6e-12
426220136	608	PREDICTED: dolichyl-diphosphooligosaccha	0.626	0.118	0.513	1e-11
320165061	458	Rpn1 protein [Capsaspora owczarzaki ATCC	0.643	0.161	0.453	1e-11
354482837	609	PREDICTED: dolichyl-diphosphooligosaccha	0.626	0.118	0.5	2e-11
357610449	167	ribophorin [Danaus plexippus]	0.617	0.425	0.478	2e-11
355717212	230	ribophorin I [Mustela putorius furo]	0.626	0.313	0.5	2e-11

>gi|346469193|gb|AEO34441.1| hypothetical protein [Amblyomma maculatum]

 Score = 77.8 bits (190), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 47/73 (64%)

Query: 37  NAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEI 96
            A V IILPE S   ++H P+PV    +  H TYLDT GRP+I L   NLVE HI+D +I
Sbjct: 359 KATVKIILPEGSSDIELHVPFPVKRHPNQRHYTYLDTMGRPVIVLEKANLVEQHIQDFQI 418

Query: 97  EYEFSKSYLGKEP 109
            Y+F K Y+ +EP
Sbjct: 419 HYKFKKLYMLQEP 431

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405960099|gb|EKC26046.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Crassostrea gigas]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 47/72 (65%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   ++ TPYPV+   +  H TYLDT GRP+I +   NLVE HI+D ++ Y 
Sbjct: 364 VKIILPEGAKNMRLETPYPVTQGENQLHFTYLDTTGRPVIVIHKSNLVEQHIQDFQLHYT 423

Query: 100 FSKSYLGKEPLL 111
           F K  L +EPL+
Sbjct: 424 FQKLLLLQEPLI 435

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|312066621|ref|XP_003136357.1| ribophorin I family protein [Loa loa] gi|307768484|gb|EFO27718.1| ribophorin I family protein [Loa loa]

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 49/76 (64%)

Query: 36  RNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIE 95
           +N K+ IILPE S   ++ TPYP++   D  H TYLDT GRP+IT+   NLV+ HI+   
Sbjct: 362 KNLKLKIILPEGSKDFKLTTPYPMTRHPDELHFTYLDTTGRPVITVEKDNLVDFHIQMFT 421

Query: 96  IEYEFSKSYLGKEPLL 111
           + YEF +  L +EP L
Sbjct: 422 LHYEFDRMQLWREPFL 437

Source: Loa loa

Species: Loa loa

Genus: Loa

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|340368294|ref|XP_003382687.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Amphimedon queenslandica]

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 46/72 (63%)

Query: 38  AKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIE 97
           A V IILPE S       PYPV  Q+   HSTYLDT GRP+I  +A+NLVE HI + ++E
Sbjct: 359 ATVKIILPEGSKNINFLPPYPVHDQATSVHSTYLDTVGRPVIIAKAYNLVEQHILNFQLE 418

Query: 98  YEFSKSYLGKEP 109
           Y+F    L +EP
Sbjct: 419 YDFESYLLLQEP 430

Source: Amphimedon queenslandica

Species: Amphimedon queenslandica

Genus: Amphimedon

Family: Niphatidae

Order: Haplosclerida

Class: Demospongiae

Phylum: Porifera

Superkingdom: Eukaryota

>gi|402592933|gb|EJW86860.1| ribophorin I family protein [Wuchereria bancrofti]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 49/79 (62%)

Query: 33  AQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIE 92
           A   N K+ IILPE S   ++ TPYPV+   D  H TYLDT GRP+IT+   NLV+ HI+
Sbjct: 359 AVIENLKLKIILPEGSKNFKLTTPYPVTRFPDELHFTYLDTTGRPVITIEKDNLVDFHIQ 418

Query: 93  DIEIEYEFSKSYLGKEPLL 111
              + YEF +  L +EP L
Sbjct: 419 MFTLHYEFDRMQLWREPFL 437

Source: Wuchereria bancrofti

Species: Wuchereria bancrofti

Genus: Wuchereria

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|426220136|ref|XP_004004273.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Ovis aries]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 371 VKIILPEGARSIQVDSPYEISRAPDELHYTYLDTFGRPVIVAHKKNLVEEHIQDIVVHYT 430

Query: 100 FSKSYLGKEPLL 111
           FSK  + +EPLL
Sbjct: 431 FSKVLMLQEPLL 442

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|320165061|gb|EFW41960.1| Rpn1 protein [Capsaspora owczarzaki ATCC 30864]

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 37  NAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEI 96
           +A+V ++LPE +   Q+HTP+ V  QS   H TYLDT GRP++ L+  NLV  H+E   +
Sbjct: 355 DAEVRVVLPEGAANIQVHTPFEVE-QSRDVHFTYLDTTGRPVVVLKKQNLVREHLEQFTV 413

Query: 97  EYEFSKSYLGKEPLL 111
            Y FS + + +EPLL
Sbjct: 414 TYTFSTTSMLQEPLL 428

Source: Capsaspora owczarzaki ATCC 30864

Species: Capsaspora owczarzaki

Genus: Capsaspora

Class: Ichthyosporea

Superkingdom: Eukaryota

>gi|354482837|ref|XP_003503602.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Cricetulus griseus] gi|344253366|gb|EGW09470.1| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Cricetulus griseus]

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S  +D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 372 VKIILPEGAKNIQVDSPYDISRAADELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 431

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 432 FNKVLMLQEPLL 443

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|357610449|gb|EHJ66983.1| ribophorin [Danaus plexippus]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query: 41  NIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEF 100
            IILPE S   +I+ P+ V+   D  H TYLDT GRP+IT +  N+VENHI+D ++ Y F
Sbjct: 67  KIILPEGSTSIKINFPFAVTRLPDSLHYTYLDTKGRPVITFKKSNVVENHIQDFQLRYTF 126

Query: 101 SKSYLGKEPLL 111
            +  + +EPLL
Sbjct: 127 PRILMLQEPLL 137

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|355717212|gb|AES05860.1| ribophorin I [Mustela putorius furo]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query: 40  VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
           V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct: 25  VKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 84

Query: 100 FSKSYLGKEPLL 111
           F+K  + +EPLL
Sbjct: 85  FNKVLMLQEPLL 96

Source: Mustela putorius furo

Species: Mustela putorius

Genus: Mustela

Family: Mustelidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
UNIPROTKB|B7Z4L4	435	RPN1 "Dolichyl-diphosphooligos	0.626	0.165	0.5	5.8e-14
RGD|3594	605	Rpn1 "ribophorin I" [Rattus no	0.626	0.119	0.5	1.2e-13
UNIPROTKB|E2RQ08	607	RPN1 "Uncharacterized protein"	0.626	0.118	0.5	1.2e-13
MGI|MGI:98084	608	Rpn1 "ribophorin I" [Mus muscu	0.626	0.118	0.5	1.2e-13
UNIPROTKB|E1C0F1	601	RPN1 "Dolichyl-diphosphooligos	0.626	0.119	0.472	1.5e-13
UNIPROTKB|F1MJ36	608	LOC539818 "Uncharacterized pro	0.626	0.118	0.5	2e-13
UNIPROTKB|P04843	607	RPN1 "Dolichyl-diphosphooligos	0.626	0.118	0.5	2e-13
ZFIN|ZDB-GENE-030131-4286	598	rpn1 "ribophorin I" [Danio rer	0.608	0.117	0.5	4e-13
UNIPROTKB|F1SPG2	608	RPN1 "Dolichyl-diphosphooligos	0.626	0.118	0.5	1.8e-12
UNIPROTKB|Q9GMB0	608	RPN1 "Dolichyl-diphosphooligos	0.626	0.118	0.5	1.8e-12

UNIPROTKB|B7Z4L4 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)]

 Score = 172 (65.6 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   +I +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   198 VKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 257

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   258 FNKVLMLQEPLL 269

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

RGD|3594 Rpn1 "ribophorin I" [Rattus norvegicus (taxid:10116)]

 Score = 174 (66.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   368 VKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 427

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   428 FNKVLMLQEPLL 439

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0005791 "rough endoplasmic reticulum" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0015833 "peptide transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 174 (66.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   370 VKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 429

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   430 FNKVLMLQEPLL 441

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)]

 Score = 174 (66.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   371 VKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 430

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   431 FNKVLMLQEPLL 442

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0005791 "rough endoplasmic reticulum" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)]

 Score = 174 (66.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V I+LPE +    + +PY ++  SD  H TYLDT GRP+I    +NLVE HI+DI + Y 
Sbjct:   364 VKIVLPEGAKNIHVDSPYEINRASDELHYTYLDTFGRPVIVAHKNNLVEQHIQDIVVHYT 423

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   424 FNKILMLQEPLL 435

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1MJ36 LOC539818 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 173 (66.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  + TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   371 VKIILPEGARNIQVDSPYEISRAPDKLYYTYLDTFGRPVIVAHKKNLVEQHIQDIMVHYT 430

Query:   100 FSKSYLGKEPLL 111
             FSK  + +EPLL
Sbjct:   431 FSKVLMLQEPLL 442

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)]

 Score = 172 (65.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   +I +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   370 VKIILPEGAKNIEIDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYT 429

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   430 FNKVLMLQEPLL 441

GO:0016021 "integral to membrane" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

GO:0005791 "rough endoplasmic reticulum" evidence=ISS

GO:0006464 "cellular protein modification process" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS;TAS

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=TAS

GO:0008250 "oligosaccharyltransferase complex" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0006412 "translation" evidence=TAS

GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 4.0e-13, P = 4.0e-13
 Identities = 37/74 (50%), Positives = 49/74 (66%)

Query:    40 VNIILPEHSLVRQIH--TPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIE 97
             V +ILPE +  R IH  TPYP+S   D  H TYLDT GRP++    +NLVE HI+D+ + 
Sbjct:   361 VRLILPEGA--RNIHMDTPYPISRSQDELHYTYLDTFGRPVLVATKNNLVEQHIQDVVVH 418

Query:    98 YEFSKSYLGKEPLL 111
             Y F+K  + +EPLL
Sbjct:   419 YTFNKILMLQEPLL 432

GO:0006486 "protein glycosylation" evidence=IEA

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)]

 Score = 176 (67.0 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   371 VKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAHKKNLVEQHIQDIVVHYT 430

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   431 FNKVLMLQEPLL 442

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)]

 Score = 176 (67.0 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:    40 VNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIEDIEIEYE 99
             V IILPE +   Q+ +PY +S   D  H TYLDT GRP+I     NLVE HI+DI + Y 
Sbjct:   371 VKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAHKKNLVEQHIQDIVVHYT 430

Query:   100 FSKSYLGKEPLL 111
             F+K  + +EPLL
Sbjct:   431 FNKVLMLQEPLL 442

GO:0006486 "protein glycosylation" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	115
pfam04597	429	pfam04597, Ribophorin_I, Ribophorin I	2e-19

>gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I

 Score = 81.5 bits (202), Expect = 2e-19
 Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 36  RNAKVNIILPEHSLVRQIHTPYPVSSQSDGTHSTYLDTAGRPMITLRAHNLVENHIE-DI 94
            N  + +ILPE +   ++ TP+P+ S       +YLDT GRP++TL   NLV+ H + D+
Sbjct: 336 DNVTLKVILPEGAEDIKVETPFPIDSVELELEKSYLDTKGRPVVTLEKKNLVDEHRDQDV 395

Query: 95  EIEYEFSKSYLGKEPLL 111
            + Y++SKS + ++PLL
Sbjct: 396 LVTYKYSKSAILRKPLL 412

Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
PF04597	432	Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri	100.0
KOG2291|consensus	602		100.0

>PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2

Probab=100.00  E-value=3.7e-46  Score=312.50  Aligned_cols=111  Identities=32%  Similarity=0.517  Sum_probs=108.7

Q ss_pred             ccccceeccCcccceEeeecCChhhhcc------------------ccceeeEEEEEEcCCCeeeeeEeCCcceeecccc
Q psy4031           4 ARVTWARSRYWHALYIPGHRRSPYDYAA------------------RAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDG   65 (115)
Q Consensus         4 ~~~~~plfGGWky~ftiGyn~pl~~~l~------------------d~~~d~~~l~ViLPEGA~~i~v~~P~~v~~~~~~   65 (115)
                      .||||||||||||+|++|||+|+++||+                  |++||+++++|+|||||+||+|.+|+++++.+++
T Consensus       289 l~PRfPLfGGWk~~FtiGyn~p~~~~l~~~~~~~y~L~vp~~~~~~d~~~d~~~l~i~LPEGA~~i~v~~P~~~~~~~~~  368 (432)
T PF04597_consen  289 LKPRFPLFGGWKYNFTIGYNLPLSNFLRKSGDGRYVLKVPFLPGIKDIVYDNVELRIILPEGAKNIKVSSPFPVDSVSVS  368 (432)
T ss_pred             EEcCCcccCCcceeEEEEccCChHHhEEECCCCcEEEEEECcCCcCceEEEEEEEEEECCCCceeeeEeCCccceeeecc
Confidence            6899999999999999999999999999                  9999999999999999999999999999999999


Q ss_pred             ceEEeccCCCCcEEEEEeccCcccCc-ceEEEEEEeCchhhcccceeeee
Q psy4031          66 THSTYLDTAGRPMITLRAHNLVENHI-EDIEIEYEFSKSYLGKEPLLRAF  114 (115)
Q Consensus        66 ~~~TYLDt~GRp~v~l~~~Nlvd~h~-~~i~V~Y~~~~~~~l~kPl~i~~  114 (115)
                      .++||||+.|||+|+++++||+|+|+ ++|+|+|+|+..+||+|||+|++
T Consensus       369 ~~~tyLDt~GR~vv~l~~~nlvd~~~~~~~~v~Y~~~~~~~~~kPl~i~~  418 (432)
T PF04597_consen  369 THKTYLDTTGRPVVVLEKKNLVDEHNDQDFQVTYTYPSSAMLRKPLLIAG  418 (432)
T ss_pred             ceeeeeeccCceEEEEEeccCCHhHCCeeEEEEEEcCHHHHHHHHHHHHH
Confidence            99999999999999999999999988 99999999999999999999875

4.1.119 from EC). OST catalyses the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are thought to be responsible for OST catalytic activity []. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function []. Most family members are predicted to have a transmembrane helix at the C terminus of this region.; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0006486 protein glycosylation, 0005783 endoplasmic reticulum, 0016021 integral to membrane

>KOG2291|consensus

Probab=100.00  E-value=1.3e-44  Score=309.64  Aligned_cols=111  Identities=31%  Similarity=0.477  Sum_probs=108.6

Q ss_pred             ccccceeccCcccceEeeecCChhhhcc------------------ccceeeEEEEEEcCCCeeeeeEeCCcceeecccc
Q psy4031           4 ARVTWARSRYWHALYIPGHRRSPYDYAA------------------RAQPRNAKVNIILPEHSLVRQIHTPYPVSSQSDG   65 (115)
Q Consensus         4 ~~~~~plfGGWky~ftiGyn~pl~~~l~------------------d~~~d~~~l~ViLPEGA~~i~v~~P~~v~~~~~~   65 (115)
                      .||||||||||||+|+||||+|+++||+                  |++||+++++|+|||||+||++.+||++.+.+.+
T Consensus       315 irPRfPlFGGWkt~ftiGy~lP~~eyl~~~g~ry~L~~~~~~~~~d~~V~dkl~ikvvLPEGak~i~i~tP~~is~~p~e  394 (602)
T KOG2291|consen  315 IRPRFPLFGGWKTNFTIGYNLPLEEYLFSKGRRYALKIILIDHIFDDTVYDKLTIKVVLPEGAKDIEIDTPYEISRSPIE  394 (602)
T ss_pred             eccCCccccCceeeEEEecCCcHHHHhhccCceeEEccccccCCCccceeeeEEEEEEccCCCcccccccceeeccCchh
Confidence            5999999999999999999999999999                  6799999999999999999999999999999999


Q ss_pred             ceEEeccCCCCcEEEEEeccCcccCcceEEEEEEeCchhhcccceeeee
Q psy4031          66 THSTYLDTAGRPMITLRAHNLVENHIEDIEIEYEFSKSYLGKEPLLRAF  114 (115)
Q Consensus        66 ~~~TYLDt~GRp~v~l~~~Nlvd~h~~~i~V~Y~~~~~~~l~kPl~i~~  114 (115)
                      +++|||||.|||+++++|+|+++.|+++|+|+|+|++..||+|||+|++
T Consensus       395 ~~~syLDt~GR~Vvv~ek~Nvv~~h~~~i~v~Y~f~~~sml~ePL~i~a  443 (602)
T KOG2291|consen  395 LKYSYLDTNGRPVVVLEKNNVVPDHNQDIVVHYTFSKSSMLQEPLLIIA  443 (602)
T ss_pred             hhhhhhhccCcEEEEEEccccCCCCCccEEEEEEechhHhhhccHHHHH
Confidence            9999999999999999999999999999999999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00