Psyllid ID: psy4206

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN
Secondary Structure (PSIPRED)
cEEEcccccHHHHHHHHHcccHHHHHHcccccccccccccccccccEEccEEEccccccEEEEEEEcccccccccccEEEEEEHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHccccHHHHHHHHccccccccccHHHHHHccEcccccccccccEEEEEEEEcccccEEEccEEEEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
mvfgsahrgrlNLLTNivhaplvnvfsrflpleytdpgdgdvkyHLGAYVkyrtphsdklmtltlssnpshlelvypvnlgktkaFQFLSFRVDQKN
Flexible Loop (DISEMBL)
mvfgsahrgrlnlltnivHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN
Low Complexity Region (SEG)
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN
Disordered region (IsUnstruct)
*******RGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFR*****
Disordered Region (DISOPRED)
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAF***********
Disordered Region (DISEMBL)
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN
Disordered Region (DISPRO)
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEY*DPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLS*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
Q68EW0	1018	2-oxoglutarate dehydrogen	N/A	N/A	0.907	0.086	0.516	4e-18
Q5R9L8	1010	2-oxoglutarate dehydrogen	yes	N/A	0.907	0.087	0.505	2e-17
Q9ULD0	1010	2-oxoglutarate dehydrogen	no	N/A	0.907	0.087	0.505	2e-17
Q148N0	1023	2-oxoglutarate dehydrogen	no	N/A	0.907	0.086	0.494	3e-17
Q6P6Z8	1021	2-oxoglutarate dehydrogen	N/A	N/A	0.907	0.086	0.505	3e-17
Q5RCB8	1023	2-oxoglutarate dehydrogen	no	N/A	0.907	0.086	0.494	4e-17
Q02218	1023	2-oxoglutarate dehydrogen	no	N/A	0.907	0.086	0.494	4e-17
Q60HE2	1023	2-oxoglutarate dehydrogen	N/A	N/A	0.907	0.086	0.494	4e-17
Q5XI78	1023	2-oxoglutarate dehydrogen	no	N/A	0.907	0.086	0.483	9e-17
Q60597	1023	2-oxoglutarate dehydrogen	no	N/A	0.907	0.086	0.483	1e-16

>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis GN=ogdhl PE=2 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F P LE +D G GDVKYHLG Y +     ++K
Sbjct: 300 VILGMPHRGRLNVLANVIRKDLDQIFCQFDPKLEASDEGSGDVKYHLGMYHERINRATNK 359

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE V PV  GKTKA QF
Sbjct: 360 KITLSLVANPSHLEAVDPVVQGKTKAEQF 388

Xenopus laevis (taxid: 8355)
EC: 1EC: .EC: 2EC: .EC: 4EC: .EC: -

>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii GN=OGDHL PE=2 SV=2

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     +++
Sbjct: 292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE V PV  GKTKA QF
Sbjct: 352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: -

>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=1 SV=3

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     +++
Sbjct: 292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE V PV  GKTKA QF
Sbjct: 352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: -

>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH PE=2 SV=1

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis GN=ogdh PE=2 SV=1

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE TD G GDVKYHLG Y +     +D+
Sbjct: 304 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDR 363

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV  GKTKA QF
Sbjct: 364 NITLSLVANPSHLEAADPVVQGKTKAEQF 392

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GD+KYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
           ++ G  HRGRLN+L N++   L  +F +F   LE  D G GD+KYHLG Y +     +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDR 364

Query: 60  LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            +TL+L +NPSHLE   PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
324500264	911	2-oxoglutarate dehydrogenase [Ascaris su	0.907	0.096	0.511	1e-17
195328290	1111	GM25677 [Drosophila sechellia] gi|194119	0.969	0.084	0.479	2e-17
307204872	1080	2-oxoglutarate dehydrogenase E1 componen	0.907	0.081	0.5	2e-17
195494948	1113	GE19891 [Drosophila yakuba] gi|194181159	0.969	0.084	0.479	2e-17
328786455	1072	PREDICTED: 2-oxoglutarate dehydrogenase,	0.907	0.082	0.5	2e-17
195590970	1112	GD14681 [Drosophila simulans] gi|1941972	0.969	0.084	0.479	2e-17
198463435	1116	GA11127 [Drosophila pseudoobscura pseudo	0.969	0.084	0.479	2e-17
194872229	1113	GG13594 [Drosophila erecta] gi|190654770	0.969	0.084	0.479	2e-17
193704554	1029	PREDICTED: 2-oxoglutarate dehydrogenase,	0.907	0.085	0.5	3e-17
328697388	1026	PREDICTED: 2-oxoglutarate dehydrogenase,	0.907	0.085	0.5	3e-17

>gi|324500264|gb|ADY40130.1| 2-oxoglutarate dehydrogenase [Ascaris suum]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/88 (51%), Positives = 57/88 (64%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G  HRGRLN+L N+ H PL+ +FS+F  LE  D G GDVKYHLG  V+     S + 
Sbjct: 192 VVIGMPHRGRLNILANVCHQPLLTIFSQFSALEPADEGSGDVKYHLGVCVERFNSESQRS 251

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQF 88
           + + L +NPSHLE V PV LGK +A  F
Sbjct: 252 VKIALVANPSHLEAVGPVVLGKVRAELF 279

Source: Ascaris suum

Species: Ascaris suum

Genus: Ascaris

Family: Ascarididae

Order: Ascaridida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|195328290|ref|XP_002030849.1| GM25677 [Drosophila sechellia] gi|194119792|gb|EDW41835.1| GM25677 [Drosophila sechellia]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 309 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 368

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct: 369 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 402

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204872|gb|EFN83427.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Harpegnathos saltator]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 58/88 (65%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G  HRGRLN+L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 314 IVMGMPHRGRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKN 373

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQF 88
           + L + +NPSHLE V PV  GKT+A QF
Sbjct: 374 IRLAVVANPSHLEAVDPVVQGKTRAEQF 401

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195494948|ref|XP_002095058.1| GE19891 [Drosophila yakuba] gi|194181159|gb|EDW94770.1| GE19891 [Drosophila yakuba]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 309 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 368

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct: 369 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 402

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786455|ref|XP_391838.3| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 58/88 (65%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G  HRGRLN+L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 321 IVMGMPHRGRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKN 380

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQF 88
           + L + +NPSHLE V PV  GKT+A QF
Sbjct: 381 IRLAVVANPSHLEAVDPVVQGKTRAEQF 408

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195590970|ref|XP_002085217.1| GD14681 [Drosophila simulans] gi|194197226|gb|EDX10802.1| GD14681 [Drosophila simulans]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 309 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 368

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct: 369 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 402

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198463435|ref|XP_001352820.2| GA11127 [Drosophila pseudoobscura pseudoobscura] gi|198151254|gb|EAL30321.2| GA11127 [Drosophila pseudoobscura pseudoobscura]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 310 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 369

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct: 370 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 403

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194872229|ref|XP_001972987.1| GG13594 [Drosophila erecta] gi|190654770|gb|EDV52013.1| GG13594 [Drosophila erecta]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 309 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 368

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct: 369 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 402

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193704554|ref|XP_001950262.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Acyrthosiphon pisum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/88 (50%), Positives = 58/88 (65%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN+L NI   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 321 VIMGMPHRGRLNVLANICRKPLSQIFTQFAALEAEDDGSGDVKYHLGTYIERLNRATNKN 380

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQF 88
           + L + +NPSHLE V PV  GKT+A QF
Sbjct: 381 VRLAVVANPSHLEAVDPVVQGKTRAEQF 408

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328697388|ref|XP_003240324.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 3 [Acyrthosiphon pisum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/88 (50%), Positives = 58/88 (65%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           ++ G  HRGRLN+L NI   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct: 318 VIMGMPHRGRLNVLANICRKPLSQIFTQFAALEAEDDGSGDVKYHLGTYIERLNRATNKN 377

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQF 88
           + L + +NPSHLE V PV  GKT+A QF
Sbjct: 378 VRLAVVANPSHLEAVDPVVQGKTRAEQF 405

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
FB|FBgn0010352	1105	Nc73EF "Neural conserved at 73	0.969	0.085	0.479	3.2e-17
UNIPROTKB|E1BTL0	1014	OGDHL "Uncharacterized protein	0.907	0.086	0.516	7.7e-17
ZFIN|ZDB-GENE-030131-2143	1024	ogdha "oxoglutarate (alpha-ket	0.989	0.093	0.484	1.6e-16
UNIPROTKB|H9GW68	798	OGDH "Uncharacterized protein"	0.907	0.110	0.494	2.4e-16
UNIPROTKB|E9PFG7	873	OGDH "2-oxoglutarate dehydroge	0.907	0.100	0.494	2.7e-16
ASPGD|ASPL0000029904	1048	kgdA [Emericella nidulans (tax	0.969	0.089	0.5	2.8e-16
UNIPROTKB|F5H801	974	OGDH "2-oxoglutarate dehydroge	0.907	0.090	0.494	3.2e-16
UNIPROTKB|F1MWG1	1010	OGDHL "Uncharacterized protein	0.907	0.087	0.505	3.3e-16
UNIPROTKB|Q9ULD0	1010	OGDHL "2-oxoglutarate dehydrog	0.907	0.087	0.505	3.3e-16
UNIPROTKB|F1PK40	1021	OGDHL "Uncharacterized protein	0.907	0.086	0.505	3.4e-16

FB|FBgn0010352 Nc73EF "Neural conserved at 73EF" [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 46/96 (47%), Positives = 62/96 (64%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
             ++ G  HRGRLN L N+   PL  +F++F  LE  D G GDVKYHLG Y++     ++K 
Sbjct:   300 VIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKN 359

Query:    61 MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
             + L + +NPSHLE V PV  GKT+A QF  +R DQ+
Sbjct:   360 IRLAVVANPSHLEAVDPVVQGKTRAEQF--YRGDQE 393

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=ISS

GO:0009353 "mitochondrial oxoglutarate dehydrogenase complex" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|E1BTL0 OGDHL "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 220 (82.5 bits), Expect = 7.7e-17, P = 7.7e-17
 Identities = 46/89 (51%), Positives = 59/89 (66%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     ++K
Sbjct:   296 VIMGMPHRGRLNVLANVIRKELEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRATNK 355

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE V PV  GKTKA QF
Sbjct:   356 KITLSLMANPSHLEAVDPVVQGKTKAEQF 384

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2143 ogdha "oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide)" [Danio rerio (taxid:7955)]

 Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 47/97 (48%), Positives = 61/97 (62%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +++
Sbjct:   305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTNR 364

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
              +TL+L +NPSHLE V PV  GKTKA QF S   D K
Sbjct:   365 NITLSLVANPSHLEAVNPVVQGKTKAEQFYSGDTDGK 401

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|H9GW68 OGDH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 214 (80.4 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 44/89 (49%), Positives = 58/89 (65%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct:   199 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 258

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE   PV +GKTKA QF
Sbjct:   259 NITLSLVANPSHLEAADPVVMGKTKAEQF 287

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|E9PFG7 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 44/89 (49%), Positives = 58/89 (65%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct:   155 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 214

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE   PV +GKTKA QF
Sbjct:   215 NITLSLVANPSHLEAADPVVMGKTKAEQF 243

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

ASPGD|ASPL0000029904 kgdA [Emericella nidulans (taxid:162425)]

 Score = 215 (80.7 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 49/98 (50%), Positives = 63/98 (64%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL-PLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             +V G  HRGRLN+L+N+V  P  ++FS F    E +D G GDVKYHLG   +  TP S K
Sbjct:   326 IVIGMPHRGRLNVLSNVVRKPNESIFSEFAGSAEPSDEGSGDVKYHLGMNFERPTP-SGK 384

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN 97
              + L+L +NPSHLE   PV LGKT+A Q   +  D+KN
Sbjct:   385 RVQLSLVANPSHLEAEDPVVLGKTRAIQH--YNNDEKN 420

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=RCA

GO:0006099 "tricarboxylic acid cycle" evidence=RCA

GO:0006096 "glycolysis" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0009353 "mitochondrial oxoglutarate dehydrogenase complex" evidence=IEA

GO:0042645 "mitochondrial nucleoid" evidence=IEA

UNIPROTKB|F5H801 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 3.2e-16, P = 3.2e-16
 Identities = 44/89 (49%), Positives = 58/89 (65%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F   LE  D G GDVKYHLG Y +     +D+
Sbjct:   256 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 315

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE   PV +GKTKA QF
Sbjct:   316 NITLSLVANPSHLEAADPVVMGKTKAEQF 344

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|F1MWG1 OGDHL "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 214 (80.4 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 45/89 (50%), Positives = 59/89 (66%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     +++
Sbjct:   292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE V PV  GKTKA QF
Sbjct:   352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|Q9ULD0 OGDHL "2-oxoglutarate dehydrogenase-like, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 45/89 (50%), Positives = 59/89 (66%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     +++
Sbjct:   292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE V PV  GKTKA QF
Sbjct:   352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006096 "glycolysis" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1PK40 OGDHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 214 (80.4 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 45/89 (50%), Positives = 59/89 (66%)

Query:     1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
             ++ G  HRGRLN+L N++   L  +F +F P LE  D G GDVKYHLG Y +     +++
Sbjct:   288 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 347

Query:    60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
              +TL+L +NPSHLE V PV  GKTKA QF
Sbjct:   348 NITLSLVANPSHLEAVDPVVQGKTKAEQF 376

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O74378	ODO1_SCHPO	1, ., 2, ., 4, ., 2	0.5340	0.8865	0.0852	yes	N/A
Q5R9L8	OGDHL_PONAB	1, ., 2, ., 4, ., -	0.5056	0.9072	0.0871	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	97
cd02016	265	cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate	7e-30
PRK09404	924	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 co	1e-26
COG0567	906	COG0567, SucA, 2-oxoglutarate dehydrogenase comple	6e-25
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	3e-22
TIGR00239	929	TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenas	7e-20

>gnl|CDD|238974 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)

 Score =  106 bits (267), Expect = 7e-30
 Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 4/91 (4%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRF---LPLEYTDPGDGDVKYHLGAYVKYRTPHS 57
           +V G AHRGRLN+L N++  PL  +FS F         D G GDVKYHLG     +TP S
Sbjct: 42  VVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEDDEGSGDVKYHLGYSSDRKTP-S 100

Query: 58  DKLMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
            K + L+L+ NPSHLE V PV +GKT+A Q 
Sbjct: 101 GKKVHLSLAPNPSHLEAVNPVVMGKTRAKQD 131

OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle. Length = 265

>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed

 Score =  101 bits (255), Expect = 1e-26
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDP--GDGDVKYHLGAYVKYRTPHSD 58
           +V G AHRGRLN+L N++  P  ++F+ F      D   G GDVKYHLG      T    
Sbjct: 245 IVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLGSGDVKYHLGFSSDRETDG-- 302

Query: 59  KLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
             + L+L+ NPSHLE+V PV  G  +A Q
Sbjct: 303 GEVHLSLAFNPSHLEIVNPVVEGSVRARQ 331

Length = 924

>gnl|CDD|223641 COG0567, SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]

 Score = 96.6 bits (241), Expect = 6e-25
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 2   VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLM 61
           V G AHRGRLN+L N++  P  ++F  F          GDVKYHLG     +T      +
Sbjct: 232 VIGMAHRGRLNVLVNVLGKPYRDIFDEFEGKSAEPDLSGDVKYHLGFSSDRQTD--GGKV 289

Query: 62  TLTLSSNPSHLELVYPVNLGKTKAFQ 87
            L+L+ NPSHLE+V PV  G  +A Q
Sbjct: 290 HLSLAFNPSHLEIVNPVVEGSVRAKQ 315

Length = 906

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 89.2 bits (222), Expect = 3e-22
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 9/91 (9%)

Query: 2   VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLE-YTDP----GDGDVKYHLGAYVKYRTPH 56
           V G AHRGRLN+L NIV  P   +F  F   E   DP    G GDVKYHLGA   +    
Sbjct: 550 VIGMAHRGRLNVLANIVGKPYSQIFREF---EGNLDPRSAQGSGDVKYHLGAEGTFTQMF 606

Query: 57  SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
            D+ + ++L++NPSHLE V PV  G  +A Q
Sbjct: 607 GDE-IKVSLAANPSHLEAVDPVLEGIVRAKQ 636

Length = 1228

>gnl|CDD|161785 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenase, E1 component

 Score = 82.2 bits (203), Expect = 7e-20
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL--PLEYTDPGDGDVKYHLGAYVKYRTPHSD 58
           +V G AHRGRLN+L N++  P  ++FS F      +   G GDVKYH+G +    T    
Sbjct: 245 VVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLPDGTGDVKYHMGRFSSDFTT-DG 303

Query: 59  KLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
           KL+ L L+ NPSHLE+V PV +G T+A  
Sbjct: 304 KLVHLALAFNPSHLEIVSPVVIGSTRARL 332

The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase [Energy metabolism, TCA cycle]. Length = 929

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
KOG0450|consensus	1017		100.0
COG0567	906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	100.0
PRK12270	1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	100.0
TIGR00239	929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
cd02016	265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	100.0
KOG0451|consensus	913		99.97
PRK09404	924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	99.96
PF00676	300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	97.5
cd02000	293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	96.35
PLN02374	433	pyruvate dehydrogenase (acetyl-transferring)	95.62

>KOG0450|consensus

Probab=100.00  E-value=1.7e-42  Score=297.63  Aligned_cols=96  Identities=52%  Similarity=0.780  Sum_probs=91.4

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      ||||||||||||||+||+.||+++||+||+|.+..+++|||||||||++.++.++++||.|+|+|++||||||||||||+
T Consensus       305 iviGMpHRGRLNvL~NVvRKpl~qIfseF~g~~~~DeGSGDVKYHLG~~~~R~~r~s~k~i~LslVANPSHLEA~DPVV~  384 (1017)
T KOG0450|consen  305 IVIGMPHRGRLNVLANVVRKPLEQIFSEFSGLEAADEGSGDVKYHLGMYYERPNRVSGKNITLSLVANPSHLEAVDPVVM  384 (1017)
T ss_pred             eEecCCccchhHHHHHHHhhHHHHHHHhccCCCCCcCCCCceeeeeccccccccccCCceeEEEEecCchhhcccCceee
Confidence            79999999999999999999999999999997777789999999999999999988999999999999999999999999


Q ss_pred             hhhhhhhhhhcccccC
Q psy4206          81 GKTKAFQFLSFRVDQK   96 (97)
Q Consensus        81 G~~RA~Q~~~~d~~~~   96 (97)
                      |||||+|.+.+|.+++
T Consensus       385 GKtrA~q~y~~D~~~~  400 (1017)
T KOG0450|consen  385 GKTRAEQFYTGDEEGK  400 (1017)
T ss_pred             chHHHHHHhccccccc
Confidence            9999999999987653

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]

Probab=100.00  E-value=3.9e-42  Score=299.14  Aligned_cols=92  Identities=40%  Similarity=0.548  Sum_probs=85.6

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      ||||||||||||||+||||||++.||+||+|.......+||||||+|+++++.+. + +.|+|+|++||||||+|||||+
T Consensus       231 vviGMaHRGRLNvL~nvlgKp~~~if~eF~g~~~~~~~sGDVKYH~G~~~~~~~~-~-~~v~l~La~NPSHLE~v~PVV~  308 (906)
T COG0567         231 VVIGMAHRGRLNVLVNVLGKPYRDIFDEFEGKSAEPDLSGDVKYHLGFSSDRQTD-G-GKVHLSLAFNPSHLEIVNPVVE  308 (906)
T ss_pred             EEecccccchHHHHHHHhCCCHHHHHHHhCCCCCCCCcccccccccccccccccC-C-CeeEEEecCCcchhhhhchhhh
Confidence            7999999999999999999999999999999876555599999999999999986 4 4899999999999999999999


Q ss_pred             hhhhhhhhhhcccc
Q psy4206          81 GKTKAFQFLSFRVD   94 (97)
Q Consensus        81 G~~RA~Q~~~~d~~   94 (97)
                      |++||+|+.+.|.+
T Consensus       309 G~vRa~Qd~~~d~~  322 (906)
T COG0567         309 GSVRAKQDRLGDTE  322 (906)
T ss_pred             cchHhhhhhhccCc
Confidence            99999999998754

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed

Probab=100.00  E-value=7.3e-40  Score=288.07  Aligned_cols=91  Identities=43%  Similarity=0.572  Sum_probs=85.0

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCC--CCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCcc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPV   78 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~--~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPV   78 (97)
                      ||||||||||||||+||.||||.+||+||+|+-.|.  .+|||||||||++.+.... .|++|.|+|++|||||||||||
T Consensus       549 vvigm~HRGRLNVLani~gK~y~qiF~EFegn~dp~~~~GsGDVKYHlG~eG~~~~~-~g~~~~v~laaNPSHLEavdpV  627 (1228)
T PRK12270        549 VVIGMAHRGRLNVLANIVGKPYSQIFREFEGNLDPRSAQGSGDVKYHLGAEGTFTQM-FGDEIKVSLAANPSHLEAVDPV  627 (1228)
T ss_pred             EEecccccchHHHHHHHhcCCHHHHHHHhcCCCCccccCcCcceeeeccCceeeecc-CCCeeEEEEecCchhhhhcchH
Confidence            689999999999999999999999999999976544  4899999999999999887 7788999999999999999999


Q ss_pred             chhhhhhhhhhhcc
Q psy4206          79 NLGKTKAFQFLSFR   92 (97)
Q Consensus        79 v~G~~RA~Q~~~~d   92 (97)
                      ++|.+|||||..+.
T Consensus       628 leGivRakQd~l~~  641 (1228)
T PRK12270        628 LEGIVRAKQDRLDK  641 (1228)
T ss_pred             hhhhhhhhhhhhcc
Confidence            99999999999874

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component

Probab=100.00  E-value=1.7e-35  Score=259.27  Aligned_cols=90  Identities=44%  Similarity=0.681  Sum_probs=81.5

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCC--CCCCccccccc-eeEEEEecCCCceEEEEeecCCCcccccCc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLG-AYVKYRTPHSDKLMTLTLSSNPSHLELVYP   77 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~--~~~GDVkYHlG-~~~~~~~~~~g~~i~lsl~~NPSHLEaVnP   77 (97)
                      ||||||||||||||+||+|||+++||+||.|+..+.  .++||||||+| +++++++  .++.++++|++||||||||+|
T Consensus       245 ~v~gmaHRGRlnvL~nv~gkp~~~if~ef~g~~~~~~~~g~gdvKyHlg~~~~~~~~--~~~~~~~~l~~npSHLeav~P  322 (929)
T TIGR00239       245 VVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLPDGTGDVKYHMGRFSSDFTT--DGKLVHLALAFNPSHLEIVSP  322 (929)
T ss_pred             EEeccccCCcHHHHHHHhCCCHHHHHHHHcCCCCCcccCCCCCcCccCCCccccccc--CCCcceeeecCCCcccccccc
Confidence            689999999999999999999999999999976543  27999999999 8887766  467899999999999999999


Q ss_pred             cchhhhhhhhhhhcc
Q psy4206          78 VNLGKTKAFQFLSFR   92 (97)
Q Consensus        78 Vv~G~~RA~Q~~~~d   92 (97)
                      |++|+|||+|+..+|
T Consensus       323 va~G~ArA~q~~~~~  337 (929)
T TIGR00239       323 VVIGSTRARLDRLND  337 (929)
T ss_pred             hhhhHHHHHHHhcCC
Confidence            999999999998653

The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase.

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)

Probab=100.00  E-value=7.2e-35  Score=226.69  Aligned_cols=90  Identities=50%  Similarity=0.734  Sum_probs=82.8

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCC-CC--CCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEY-TD--PGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYP   77 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~-~~--~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnP   77 (97)
                      +|+|||||||||+|+|++|||+++||+||.|+.. ++  .++||||||+|++.++++. .+++|+++|++||||||+++|
T Consensus        42 ~v~gm~HRgrln~L~~~lg~~~~~if~ef~g~~~~~~~~~~~gdv~yHlg~~~~~~~~-~~~~~~~~l~~npS~l~~~~p  120 (265)
T cd02016          42 VVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEDDEGSGDVKYHLGYSSDRKTP-SGKKVHLSLAPNPSHLEAVNP  120 (265)
T ss_pred             EEeccCcCCcHHHHHHHhCCCHHHHHHHhhCCCCCCCCCCCCCCcCcCCccCcccccC-CCCeeEEEecCCCcccccccC
Confidence            5899999999999999999999999999999765 32  3689999999999988876 689999999999999999999


Q ss_pred             cchhhhhhhhhhhc
Q psy4206          78 VNLGKTKAFQFLSF   91 (97)
Q Consensus        78 Vv~G~~RA~Q~~~~   91 (97)
                      |++|+|||+|+...
T Consensus       121 va~G~A~A~k~~~~  134 (265)
T cd02016         121 VVMGKTRAKQDYRG  134 (265)
T ss_pred             eehhHHHHHHHhcC
Confidence            99999999999864

OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.

>KOG0451|consensus

Probab=99.97  E-value=3.7e-32  Score=231.04  Aligned_cols=94  Identities=36%  Similarity=0.522  Sum_probs=85.9

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCC-CC--CCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEY-TD--PGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYP   77 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~-~~--~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnP   77 (97)
                      ||||||||||||+|+.+|+.|++.||++++|..+ |+  +..|||.+||-.|.+.+-  .+++++++|++||||||||||
T Consensus       213 viigmpHRGRlnLlt~Ll~fpP~~mFRK~~G~sEFpE~~~A~gDVlSHl~sS~dykg--~~~~lhvtMlpNPSHLEAvNP  290 (913)
T KOG0451|consen  213 VIIGMPHRGRLNLLTALLNFPPAKMFRKLSGASEFPEDIEAMGDVLSHLHSSEDYKG--LGKKLHVTMLPNPSHLEAVNP  290 (913)
T ss_pred             EEEeccccCcchHHHHHhcCCHHHHHHHhcCcccCchhhhHHHHHHHHhhhhhhhcc--cCCceEEEecCChhhhhccCc
Confidence            6899999999999999999999999999999765 54  379999999999988766  478999999999999999999


Q ss_pred             cchhhhhhhhhhhcccccC
Q psy4206          78 VNLGKTKAFQFLSFRVDQK   96 (97)
Q Consensus        78 Vv~G~~RA~Q~~~~d~~~~   96 (97)
                      |+|||||++|..+++++++
T Consensus       291 VAmGKtR~rqqsr~~Gdys  309 (913)
T KOG0451|consen  291 VAMGKTRSRQQSRGEGDYS  309 (913)
T ss_pred             hhhcchhHHHHhhcCCCCC
Confidence            9999999999999887654

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed

Probab=99.96  E-value=2.2e-30  Score=227.05  Aligned_cols=90  Identities=42%  Similarity=0.562  Sum_probs=81.9

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCC--CCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCcc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEY--TDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPV   78 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~--~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPV   78 (97)
                      +|+||+||||||+|+|++|||+++||+||.|+..  ...++||||||||++.+++.+  |+++++++++||||||+|+||
T Consensus       245 ~vigmaHRgrlnvLa~v~G~~~~~ifaEf~Gk~~~~~~~~~GdvkyHlG~~~~~~g~--gg~mhi~l~~npShleav~Pv  322 (924)
T PRK09404        245 IVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLGSGDVKYHLGFSSDRETD--GGEVHLSLAFNPSHLEIVNPV  322 (924)
T ss_pred             EEEecCcCchHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCcccccCccccccCC--CCeeEeeccCCccccccccCe
Confidence            5899999999999999999999999999999863  223799999999999987764  678999999999999999999


Q ss_pred             chhhhhhhhhhhcc
Q psy4206          79 NLGKTKAFQFLSFR   92 (97)
Q Consensus        79 v~G~~RA~Q~~~~d   92 (97)
                      ++|+|||+|+..++
T Consensus       323 a~G~A~A~q~~~~~  336 (924)
T PRK09404        323 VEGSVRARQDRRGD  336 (924)
T ss_pred             ehhHHHHHHHhcCC
Confidence            99999999998755

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex

Probab=97.50  E-value=1.5e-05  Score=62.58  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=51.0

Q ss_pred             eccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhh
Q psy4206           3 FGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGK   82 (97)
Q Consensus         3 ~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~   82 (97)
                      +-+.||++.++|+.  +.++.++|+||.|+.   .+.|+... -...       ..+..++...++|+|.+  .|+++|.
T Consensus        49 v~~~yR~~~~~la~--g~~~~~~~~e~~g~~---~g~~g~~~-~~~~-------~~~~~~~~~~~~~vg~~--~p~a~G~  113 (300)
T PF00676_consen   49 VFPYYRDHGHALAR--GIDLEEIFAELLGKA---KGHGGGRH-PLHF-------SDKGLNILGASSPVGAQ--VPIAAGV  113 (300)
T ss_dssp             EEECSTTHHHHHHT--TT-HHHHHHHHHTBT---TSTTTTGC-TTEE-------EBTTTTBEEEESSTTTH--HHHHHHH
T ss_pred             EEecccchhhhhhc--cccccchhHHhcCcc---cCCCCCcc-cccc-------ccccceeeecccccccc--Cccccch
Confidence            34559999999985  556999999999876   22344432 1111       12334666777777777  9999999


Q ss_pred             hhhhhhhhc
Q psy4206          83 TKAFQFLSF   91 (97)
Q Consensus        83 ~RA~Q~~~~   91 (97)
                      |+|.|....
T Consensus       114 A~a~k~~~~  122 (300)
T PF00676_consen  114 ALAIKYRGK  122 (300)
T ss_dssp             HHHHHHTTS
T ss_pred             hHhhhhcCC
Confidence            999997553

Pyruvate dehydrogenase (1.2.4.1 from EC), a component of the multienzyme pyruvate dehydrogenase complex; 2-oxoglutarate dehydrogenase (1.2.4.2 from EC), a component of the multienzyme 2-oxoglutarate dehydrogenase which contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3); and 2-oxoisovalerate dehydrogenase (1.2.4.4 from EC), a component of the multienzyme branched-chain alpha-keto dehydrogenase complex all belong to this family.; GO: 0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 0008152 metabolic process; PDB: 1X7Y_A 1V1M_A 1X7W_A 1OLU_A 2J9F_A 2BEW_A 1V11_A 2BFE_A 1U5B_A 2BEU_A ....

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)

Probab=96.35  E-value=0.0062  Score=47.25  Aligned_cols=71  Identities=13%  Similarity=0.117  Sum_probs=56.4

Q ss_pred             CCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhhhhh
Q psy4206           6 AHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKA   85 (97)
Q Consensus         6 aHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~~RA   85 (97)
                      .||+.-.+|+  .|.++.+||+|+.|+......-....+|++..            ...+....++|.+.-|+++|.+.|
T Consensus        54 ~yR~~~~~la--~G~~~~~~~~e~~g~~~g~~~G~~g~~h~~~~------------~~~~~~~~g~lG~~~p~a~G~a~a  119 (293)
T cd02000          54 TYRDHGHALA--RGVDLKEMLAELFGKETGPCKGRGGSMHIGDK------------EKNFFGGNGIVGGQVPLAAGAALA  119 (293)
T ss_pred             cchhHHHHHH--cCCCHHHHHHHHcCCCCCCCCCCCCCCCCCch------------hcCccccccccccchhHHHHHHHH
Confidence            8999999997  89999999999999876443223366677632            234667789999999999999999


Q ss_pred             hhhhh
Q psy4206          86 FQFLS   90 (97)
Q Consensus        86 ~Q~~~   90 (97)
                      .+...
T Consensus       120 ~k~~~  124 (293)
T cd02000         120 LKYRG  124 (293)
T ss_pred             HHHhC
Confidence            98754

PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)

Probab=95.62  E-value=0.013  Score=48.73  Aligned_cols=73  Identities=18%  Similarity=0.185  Sum_probs=53.6

Q ss_pred             eeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCC-CCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           2 VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD-PGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         2 v~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~-~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      +++ .||++..+|  ..|.++.+||+|+.|+.... .+.|+ .+|++.. +..           +...-+.|-..-|+++
T Consensus       141 v~~-~yR~h~~~L--a~G~~~~~~mael~Gk~~g~~~Grgg-smH~~~~-~~~-----------~~g~~g~lG~~lP~Av  204 (433)
T PLN02374        141 VVS-TYRDHVHAL--SKGVPARAVMSELFGKATGCCRGQGG-SMHMFSK-EHN-----------LLGGFAFIGEGIPVAT  204 (433)
T ss_pred             EEc-cCcChHHhh--hcCCCHHHHHHHHcCCCCCCCCCCCC-cCccCch-hhC-----------CCCCceeccCchhHHH
Confidence            455 899999999  67999999999999987643 35555 7888522 222           2233345667899999


Q ss_pred             hhhhhhhhhh
Q psy4206          81 GKTKAFQFLS   90 (97)
Q Consensus        81 G~~RA~Q~~~   90 (97)
                      |.+.|.|...
T Consensus       205 GaA~A~k~~~  214 (433)
T PLN02374        205 GAAFSSKYRR  214 (433)
T ss_pred             HHHHHHHHhh
Confidence            9999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	97
2xta_A	868	Crystal Structure Of The Suca Domain Of Mycobacteri		8e-13
2xt6_A	1113	Crystal Structure Of Mycobacterium Smegmatis Alpha-		8e-13
2jgd_B	933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		2e-12
2jgd_A	933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		2e-12

>pdb|2XTA|A Chain A, Crystal Structure Of The Suca Domain Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase In Complex With Acetyl-Coa (Triclinic Form) Length = 868

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
           +V    HRGRLN+L NIV  P   +FS F     P +    G GDVKYHLGA   Y    
Sbjct: 174 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGATGTYIQMF 231
Query: 57  SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
            D  + ++L++NPSHLE V PV  G  +A Q L
Sbjct: 232 GDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDL 264

>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
           +V    HRGRLN+L NIV  P   +FS F     P +    G GDVKYHLGA   Y    
Sbjct: 419 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGATGTYIQMF 476
Query: 57  SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
            D  + ++L++NPSHLE V PV  G  +A Q L
Sbjct: 477 GDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDL 509

>pdb|2JGD|B Chain B, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G AHRGRLN+L N++     ++F  F        G GDVKYH+G    ++T     L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGL 311
Query: 61  MTLTLSSNPSHLELVYPVNLGKTKA 85
           + L L+ NPSHLE+V PV +G  +A
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRA 336

>pdb|2JGD|A Chain A, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G AHRGRLN+L N++     ++F  F        G GDVKYH+G    ++T     L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGL 311
Query: 61  MTLTLSSNPSHLELVYPVNLGKTKA 85
           + L L+ NPSHLE+V PV +G  +A
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRA 336

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
2jgd_A	933	2-oxoglutarate dehydrogenase E1 component; flavopr	4e-31
2yic_A	868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	9e-31
2xt6_A	1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	2e-30

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Length = 933

 Score =  113 bits (286), Expect = 4e-31
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
           +V G AHRGRLN+L N++     ++F  F        G GDVKYH+G    ++T     L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTD--GGL 311

Query: 61  MTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
           + L L+ NPSHLE+V PV +G  +A           
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSN 347

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Length = 868

 Score =  112 bits (283), Expect = 9e-31
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL--PLEYTDPGDGDVKYHLGAYVKYRTPHSD 58
           +V    HRGRLN+L NIV  P   +FS F          G GDVKYHLGA   Y     D
Sbjct: 174 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGD 233

Query: 59  KLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
             + ++L++NPSHLE V PV  G  +A Q L    ++ 
Sbjct: 234 NDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEG 271

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113

 Score =  111 bits (281), Expect = 2e-30
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 1   MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL--PLEYTDPGDGDVKYHLGAYVKYRTPHSD 58
           +V    HRGRLN+L NIV  P   +FS F          G GDVKYHLGA   Y     D
Sbjct: 419 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGD 478

Query: 59  KLMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
             + ++L++NPSHLE V PV  G  +A Q 
Sbjct: 479 NDIEVSLTANPSHLEAVDPVLEGLVRAKQD 508

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
2jgd_A	933	2-oxoglutarate dehydrogenase E1 component; flavopr	99.89
2yic_A	868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	99.88
2xt6_A	1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	99.86
1qs0_A	407	2-oxoisovalerate dehydrogenase alpha-subunit; hete	98.5
2bfd_A	400	2-oxoisovalerate dehydrogenase alpha subunit; oxid	98.3
1umd_A	367	E1-alpha, 2-OXO acid dehydrogenase alpha subunit;	97.82
2ozl_A	365	PDHE1-A type I, pyruvate dehydrogenase E1 componen	97.38
1w85_A	368	Pyruvate dehydrogenase E1 component, alpha subunit	97.36

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*

Probab=99.89  E-value=1.1e-23  Score=183.66  Aligned_cols=88  Identities=41%  Similarity=0.633  Sum_probs=79.1

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+.....+.||||||+|++....++  |+.++++|++|||||+++.|+++
T Consensus       254 ~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~--gg~~~l~l~~~~shlg~~~p~A~  331 (933)
T 2jgd_A          254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTD--GGLVHLALAFNPSHLEIVSPVVI  331 (933)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEET--TEEEEEEECCCCSSTTCHHHHHH
T ss_pred             EEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccC--CCceEEeecccCcccccccCHHH
Confidence            4789999999999999999999999999999864333689999999999988775  67899999999999999999999


Q ss_pred             hhhhhhhhhh
Q psy4206          81 GKTKAFQFLS   90 (97)
Q Consensus        81 G~~RA~Q~~~   90 (97)
                      |.|+|+|+..
T Consensus       332 G~A~A~~~~~  341 (933)
T 2jgd_A          332 GSVRARLDRL  341 (933)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHHHhhc
Confidence            9999999874

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*

Probab=99.88  E-value=3.5e-23  Score=179.24  Aligned_cols=90  Identities=44%  Similarity=0.576  Sum_probs=74.0

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCC--CCCCccccccceeEEEEecCCCc-eEEEEeecCCCcccccCc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLGAYVKYRTPHSDK-LMTLTLSSNPSHLELVYP   77 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~--~~~GDVkYHlG~~~~~~~~~~g~-~i~lsl~~NPSHLEaVnP   77 (97)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+....  .++||||||+|++....+. .|+ .+++++++|||||+++.|
T Consensus       174 ~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~-~g~~~v~l~l~~n~s~Lg~~~P  252 (868)
T 2yic_A          174 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQM-FGDNDIEVSLTANPSHLEAVDP  252 (868)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECS-SSSCEEEEEECCCCSSTTTTHH
T ss_pred             EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCcccccccc-CCCcceeeeecCCCcccccccc
Confidence            478999999999999999999999999999986533  3689999999999988774 355 899999999999999999


Q ss_pred             cchhhhhhhhhhhc
Q psy4206          78 VNLGKTKAFQFLSF   91 (97)
Q Consensus        78 Vv~G~~RA~Q~~~~   91 (97)
                      +++|.|+|+|+..+
T Consensus       253 ~A~G~A~A~k~~~~  266 (868)
T 2yic_A          253 VLEGLVRAKQDLLD  266 (868)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhcc
Confidence            99999999998753

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}

Probab=99.86  E-value=2.1e-22  Score=177.84  Aligned_cols=90  Identities=44%  Similarity=0.576  Sum_probs=73.0

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCC--CCCCccccccceeEEEEecCCCc-eEEEEeecCCCcccccCc
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLGAYVKYRTPHSDK-LMTLTLSSNPSHLELVYP   77 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~--~~~GDVkYHlG~~~~~~~~~~g~-~i~lsl~~NPSHLEaVnP   77 (97)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+....  .++||||||+|++....+. .|+ .+++++++|||||+++.|
T Consensus       419 ~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~-~g~~~v~l~l~~n~s~Lg~~~p  497 (1113)
T 2xt6_A          419 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQM-FGDNDIEVSLTANPSHLEAVDP  497 (1113)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECS-SSSCEEEEEECCCCSSTTTTHH
T ss_pred             EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCcccccccc-CCCcceeeeecCCCcccccccc
Confidence            478999999999999999999999999999986533  3689999999999988764 355 899999999999999999


Q ss_pred             cchhhhhhhhhhhc
Q psy4206          78 VNLGKTKAFQFLSF   91 (97)
Q Consensus        78 Vv~G~~RA~Q~~~~   91 (97)
                      +++|.|+|+|+...
T Consensus       498 ~A~G~A~A~k~~~~  511 (1113)
T 2xt6_A          498 VLEGLVRAKQDLLD  511 (1113)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999998763

>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A

Probab=98.50  E-value=4.3e-08  Score=78.69  Aligned_cols=72  Identities=15%  Similarity=0.169  Sum_probs=58.2

Q ss_pred             eeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCC-CCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           2 VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDP-GDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         2 v~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~-~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      |+ |+|||+.++|+  .|+|+.+||++|.|+..... +. .+++|++.. +           ..+.++++||.+..|+++
T Consensus       128 v~-~~yR~~~~~l~--~g~~~~~i~~el~g~~~~~~~G~-g~~~h~~~~-~-----------~~~~~~~g~lG~~lp~Av  191 (407)
T 1qs0_A          128 CF-PTYRQQSILMA--RDVSLVEMICQLLSNERDPLKGR-QLPIMYSVR-E-----------AGFFTISGNLATQFVQAV  191 (407)
T ss_dssp             EE-CCSSCHHHHHH--TTCCHHHHHHHHHTCTTCTTTTC-SCTTCCCBG-G-----------GTBCCCCSSSSHHHHHHH
T ss_pred             EE-ecccchHHHHh--cCCCHHHHHHHHhCCCCCCCCCC-Cceeecchh-c-----------cCccccccccccchhHHH
Confidence            44 99999999997  99999999999999754222 22 589999862 1           135778999999999999


Q ss_pred             hhhhhhhhh
Q psy4206          81 GKTKAFQFL   89 (97)
Q Consensus        81 G~~RA~Q~~   89 (97)
                      |.+.|.|..
T Consensus       192 GaA~A~k~~  200 (407)
T 1qs0_A          192 GWAMASAIK  200 (407)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999998864

>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...

Probab=98.30  E-value=5e-07  Score=72.08  Aligned_cols=73  Identities=18%  Similarity=0.109  Sum_probs=57.7

Q ss_pred             eeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchh
Q psy4206           2 VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLG   81 (97)
Q Consensus         2 v~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G   81 (97)
                      |++ +||||.  +.+..|+++.++|++|.|+......-.+++||++..       .   +  .+..++|||....|+++|
T Consensus       109 v~~-~yR~~~--~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~-------~---~--~~~~~~g~lG~~lp~AvG  173 (400)
T 2bfd_A          109 VFG-QAREAG--VLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCK-------E---R--HFVTISSPLATQIPQAVG  173 (400)
T ss_dssp             EEC-CSCCHH--HHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBT-------T---T--TBCCCCSSTTTHHHHHHH
T ss_pred             EEe-cCcCHH--HHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCccc-------c---c--CccccCccccccccHHHH
Confidence            565 899997  778899999999999999754322122589999843       1   1  167899999999999999


Q ss_pred             hhhhhhhh
Q psy4206          82 KTKAFQFL   89 (97)
Q Consensus        82 ~~RA~Q~~   89 (97)
                      .+.|.+..
T Consensus       174 ~AlA~~~~  181 (400)
T 2bfd_A          174 AAYAAKRA  181 (400)
T ss_dssp             HHHHHHHH
T ss_pred             HHHhhhhh
Confidence            99999854

>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*

Probab=97.82  E-value=8.4e-06  Score=63.87  Aligned_cols=72  Identities=15%  Similarity=0.178  Sum_probs=56.8

Q ss_pred             cCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhhhh
Q psy4206           5 SAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTK   84 (97)
Q Consensus         5 MaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~~R   84 (97)
                      ++||+  +.+.++.|+++.++|++|.++......-++.+||++...      .      .+.++++||++..|+++|.+.
T Consensus        93 ~s~r~--~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~------~------~~~~~~g~lG~~l~~a~G~A~  158 (367)
T 1umd_A           93 PYYRD--HGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKA------L------NFFTVASPIASHVPPAAGAAI  158 (367)
T ss_dssp             CCTTT--HHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTT------T------TBCCCCSSTTTTHHHHHHHHH
T ss_pred             eCcHH--HHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccc------c------CcCCCCchhhhhhhHHHHHHH
Confidence            79996  999999999999999999996543222234589997432      1      356699999999999999999


Q ss_pred             hhhhhh
Q psy4206          85 AFQFLS   90 (97)
Q Consensus        85 A~Q~~~   90 (97)
                      |.+...
T Consensus       159 a~k~~~  164 (367)
T 1umd_A          159 SMKLLR  164 (367)
T ss_dssp             HHHHTT
T ss_pred             HHHHhC
Confidence            988654

>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*

Probab=97.38  E-value=0.00012  Score=57.76  Aligned_cols=66  Identities=12%  Similarity=0.072  Sum_probs=52.7

Q ss_pred             CCcchHHHHHHhhCCCHHHHhchhCCCCCCC--CCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhhh
Q psy4206           6 AHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKT   83 (97)
Q Consensus         6 aHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~--~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~~   83 (97)
                      .||  .+.+++++|+|+.+||+||.|+....  ...||  ||+. +       .      .+....+++-+..|+++|.+
T Consensus        92 ~yR--~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~--~H~~-~-------~------~~~~~~g~~G~~lp~A~G~A  153 (365)
T 2ozl_A           92 AYR--AHGFTFTRGLSVREILAELTGRKGGCAKGKGGS--MHMY-A-------K------NFYGGNGIVGAQVPLGAGIA  153 (365)
T ss_dssp             CSC--CHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCT--TCCC-B-------T------TBCCCCCSTTTHHHHHHHHH
T ss_pred             HHH--HHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCC--CCcC-c-------c------ccCCCcchhhhhhHHHHHHH
Confidence            588  79999999999999999999976532  23577  8984 2       1      13456789999999999999


Q ss_pred             hhhhhh
Q psy4206          84 KAFQFL   89 (97)
Q Consensus        84 RA~Q~~   89 (97)
                      +|.+..
T Consensus       154 ~A~~~~  159 (365)
T 2ozl_A          154 LACKYN  159 (365)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            999864

>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*

Probab=97.36  E-value=2.5e-05  Score=61.62  Aligned_cols=65  Identities=11%  Similarity=0.006  Sum_probs=50.7

Q ss_pred             CeeccCCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccch
Q psy4206           1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNL   80 (97)
Q Consensus         1 iv~GMaHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~   80 (97)
                      +|++| ||+  +.+.+..|+++..+|+||.|...   + |+  +|         .      ++.+.+++|||.+..|+++
T Consensus        97 ~v~~~-~R~--~~~~~~~G~~~~~~~~el~G~~~---G-~~--~h---------~------~~~~~~~~g~lG~~lp~Av  152 (368)
T 1w85_A           97 FILPG-YRD--VPQIIWHGLPLYQAFLFSRGHFH---G-NQ--IP---------E------GVNVLPPQIIIGAQYIQAA  152 (368)
T ss_dssp             EEECC-SSC--HHHHHHTTCCHHHHHHHHHTCGG---G-GC--CC---------T------TCCBCCCCCSTTHHHHHHH
T ss_pred             EEEec-chh--HHHHHhcCCCHHHHHHHHCCCCC---C-CC--CC---------c------ccccCCCccccCccccHHH
Confidence            36788 755  67889999999999999998643   1 11  23         1      1357789999999999999


Q ss_pred             hhhhhhhhh
Q psy4206          81 GKTKAFQFL   89 (97)
Q Consensus        81 G~~RA~Q~~   89 (97)
                      |.+.|.+..
T Consensus       153 G~A~A~~~~  161 (368)
T 1w85_A          153 GVALGLKMR  161 (368)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHhHhh
Confidence            999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	97
d2ozla1	361	E1-beta subunit of pyruvate dehydrogenase (PP modu	91.67
d1umda_	362	Branched-chain alpha-keto acid dehydrogenase, PP m	80.34

>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: E1-beta subunit of pyruvate dehydrogenase (PP module)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.12  Score=38.58  Aligned_cols=71  Identities=11%  Similarity=0.040  Sum_probs=51.1

Q ss_pred             CCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhhhhh
Q psy4206           6 AHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKA   85 (97)
Q Consensus         6 aHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~~RA   85 (97)
                      .||++...|+  .|.|+.+||+|+.|+......-+.--.|+..        .+      ++.-.|++.+.-|++.|.|.|
T Consensus        88 ~yR~~~~~la--~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~--------~~------~~~~~~ivg~~~p~A~G~A~a  151 (361)
T d2ozla1          88 AYRAHGFTFT--RGLSVREILAELTGRKGGCAKGKGGSMHMYA--------KN------FYGGNGIVGAQVPLGAGIALA  151 (361)
T ss_dssp             CSCCHHHHHH--TTCCHHHHHHHHTTCTTSTTTTSSCTTCCCB--------TT------BCCCCCSTTTHHHHHHHHHHH
T ss_pred             cccchheeee--ecccchhhhhhccCCcccccccccccccccc--------cc------ccCccccccccchhHHHHHHH
Confidence            6999999998  5889999999999977533222222333321        11      234468999999999999999


Q ss_pred             hhhhhcc
Q psy4206          86 FQFLSFR   92 (97)
Q Consensus        86 ~Q~~~~d   92 (97)
                      .+...++
T Consensus       152 ~k~~~~~  158 (361)
T d2ozla1         152 CKYNGKD  158 (361)
T ss_dssp             HHHHTCC
T ss_pred             hhhccCC
Confidence            9986543

>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

Probab=80.34  E-value=0.31  Score=36.38  Aligned_cols=73  Identities=16%  Similarity=0.182  Sum_probs=52.8

Q ss_pred             CCcchHHHHHHhhCCCHHHHhchhCCCCCCCCCCCccccccceeEEEEecCCCceEEEEeecCCCcccccCccchhhhhh
Q psy4206           6 AHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKA   85 (97)
Q Consensus         6 aHRGRLNvL~nvl~kp~~~iF~ef~g~~~~~~~~GDVkYHlG~~~~~~~~~~g~~i~lsl~~NPSHLEaVnPVv~G~~RA   85 (97)
                      .||+.--.|+  .|.|+.++|+|+.|+......-.+-..|++...            ..++...|.+-+.-|++.|.|-|
T Consensus        89 ~yR~h~~~la--~G~~~~~~~ae~~gk~~g~~~Grggs~H~~~~~------------~~~~~~~~ivg~~~p~a~G~A~a  154 (362)
T d1umda_          89 YYRDHGLALA--LGIPLKELLGQMLATKADPNKGRQMPEHPGSKA------------LNFFTVASPIASHVPPAAGAAIS  154 (362)
T ss_dssp             CTTTHHHHHH--HTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTT------------TTBCCCCSSTTTTHHHHHHHHHH
T ss_pred             ccccHHHHHH--HHhhHHHHHHHHhcccCCCcccccccccccccc------------cCcccccccccccchHHHHHHHh
Confidence            5999998886  689999999999997653322233345775321            23455667888889999999999


Q ss_pred             hhhhhcc
Q psy4206          86 FQFLSFR   92 (97)
Q Consensus        86 ~Q~~~~d   92 (97)
                      .+...++
T Consensus       155 ~k~~~~~  161 (362)
T d1umda_         155 MKLLRTG  161 (362)
T ss_dssp             HHHTTCC
T ss_pred             hhccccc
Confidence            8876543