Psyllid ID: psy4447

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKSAAKQLEKTQVSLQKLELD
Secondary Structure (PSIPRED)
cHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccEEEccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccHHHHHHHHHHHHcccccEEEEEEEEEccHHHHHHHHHHHHcccHHHHccEEEcccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHccHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEEcccccHHHHHHHccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccccccccEccEEEEcc
Coil and Loop (DISEMBL)
ETLILIHHScyfdleasKSCIEVYFTtrtntpeffskrdinrpellaqskvvefgaiapktpqgYQVIFHRlqqfepskyvfqDSVRLLAMSIDACLhvegtvpgyIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEglpvrlkgihilntrplIDKIMFVVKPFMKKDLLSLvhfhpegdissvyefvppkcipggdlkgdlpdsktLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKSAAKQLEKTQVSLQKLELD
Flexible Loop (DISEMBL)
ETLILIHHSCYFDLEASKSCIEVYFTTrtntpeffskrdinrpELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVdeskrvknkksaakqlektqvslqkleld
Low Complexity Region (SEG)
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKSAAKQLEKTQVSLQKLELD
Disordered region (IsUnstruct)
**LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKY*******************************
Disordered Region (DISOPRED)
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQV*****************KTQVSLQKLELD
Disordered Region (DISEMBL)
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQV*****************************
Disordered Region (DISPRO)
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKR*********QLEKTQVSLQKLELD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNxxxxxxxxxxxxxxxxxxxxx
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q9BTX7	342	Alpha-tocopherol transfer	yes	N/A	0.804	0.614	0.255	2e-13
Q5RFR0	342	Alpha-tocopherol transfer	yes	N/A	0.804	0.614	0.255	2e-13
Q9D3D0	343	Alpha-tocopherol transfer	yes	N/A	0.804	0.612	0.264	2e-13
P41034	278	Alpha-tocopherol transfer	no	N/A	0.678	0.636	0.216	1e-11
P49638	278	Alpha-tocopherol transfer	no	N/A	0.678	0.636	0.211	7e-11
Q8BWP5	278	Alpha-tocopherol transfer	no	N/A	0.678	0.636	0.216	1e-10
A6JUQ6	327	Clavesin-2 OS=Rattus norv	no	N/A	0.885	0.706	0.229	2e-08
Q95KF7	327	Clavesin-2 OS=Macaca fasc	N/A	N/A	0.858	0.685	0.230	2e-08
Q5SYC1	327	Clavesin-2 OS=Homo sapien	no	N/A	0.858	0.685	0.230	2e-08
Q8BG92	327	Clavesin-2 OS=Mus musculu	no	N/A	0.885	0.706	0.225	3e-08

>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL PE=2 SV=2

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 9/219 (4%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKT-PQGYQVIFH 70
           FD + +   +  Y + R + PE F+     +P  L       F  + P T P+G  V+  
Sbjct: 90  FDYDRALQLLVNYHSCRRSWPEVFNNL---KPSALKDVLASGFLTVLPHTDPRGCHVVCI 146

Query: 71  RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
           R  ++ PS Y   +++R + ++++  +  E T V G + L D  GV L            
Sbjct: 147 RPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAK 206

Query: 130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
           K    LQ+G P+R+K +H++N   +   I  ++KPF+K+ + +    H   D++S++  +
Sbjct: 207 KVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLH-GSDLNSLHTNL 265

Query: 190 PPKCIPG--GDLKGDLPDSKTLHNEYVEWMKNLVEFFLQ 226
           P   +P   G   G+L D+ T +   +    + V+ F Q
Sbjct: 266 PRSILPKEYGGTAGEL-DTATWNAVLLASEDDFVKEFCQ 303

May act as a protein that binds a hydrophobic ligand.
Homo sapiens (taxid: 9606)

>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL PE=2 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 9/219 (4%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKT-PQGYQVIFH 70
           FD + +   +  Y + R + PE F+     +P  L       F  + P T P+G  V+  
Sbjct: 90  FDYDRALQLLVNYHSCRRSWPEVFNNL---KPSALKDVLASGFLTVLPHTDPRGCHVVCI 146

Query: 71  RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
           R  ++ PS Y   +++R + ++++  +  E T V G + L D  GV L            
Sbjct: 147 RPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAK 206

Query: 130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
           K    LQ+G P+R+K +H++N   +   I  ++KPF+K+ + +    H   D++S++  +
Sbjct: 207 KVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLH-GSDLNSLHTNL 265

Query: 190 PPKCIPG--GDLKGDLPDSKTLHNEYVEWMKNLVEFFLQ 226
           P   +P   G   G+L D+ T +   +    + V+ F Q
Sbjct: 266 PRSILPKEYGGTAGEL-DTATWNAVLLASEDDFVKEFCQ 303

May act as a protein that binds a hydrophobic ligand.

Pongo abelii (taxid: 9601)

>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal PE=2 SV=3

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 9/219 (4%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKT-PQGYQVIFH 70
           FD + +   +  Y   R + PE FS     RP  L       F  + P T P+G  V+  
Sbjct: 91  FDYDRALQLLVNYHGCRRSWPEVFSNL---RPSALKDVLNSGFLTVLPHTDPRGCHVLCI 147

Query: 71  RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
           R  ++ PS Y   +++R + ++++  +  E T V G + L D  GV L            
Sbjct: 148 RPDRWIPSNYPITENIRAVYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAK 207

Query: 130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
           K    LQ+G P+R+K +HI+N   +   I  ++KPF+K+ + +    H   D++S++  +
Sbjct: 208 KVIGILQDGFPIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLH-GSDLNSLHTNL 266

Query: 190 PPKCIPG--GDLKGDLPDSKTLHNEYVEWMKNLVEFFLQ 226
           P   +P   G   G+L D+ + +   +   ++ V+ F Q
Sbjct: 267 PRNILPKEYGGTAGEL-DTASWNAVLLASEEDFVKEFCQ 304

May act as a protein that binds a hydrophobic ligand.

Mus musculus (taxid: 10090)

>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 87/180 (48%), Gaps = 3/180 (1%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHR 71
           FDL+ +   ++ Y+  R   PE  +  D++   +L   K    G +  + P G +V+ +R
Sbjct: 61  FDLDLAWRLMKNYYKWRAECPELSA--DLHPRSILGLLKAGYHGVLRSRDPTGSRVLIYR 118

Query: 72  LQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSK 130
           +  ++P  +   D  R+  ++ +  +  VE    G   +FD+ G ++ H  +++     K
Sbjct: 119 ISYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQISHAFQITPSVAKK 178

Query: 131 FFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVP 190
               + +  P++++GIH++N   +   +  ++KPF+ + +   +H H     SS+ +  P
Sbjct: 179 IAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLHGNNYKSSLLQHFP 238

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Rattus norvegicus (taxid: 10116)

>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1

 Score = 67.8 bits (164), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 85/180 (47%), Gaps = 3/180 (1%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHR 71
           FDL+ +   ++ Y+  R   PE  +  D++   ++   K    G +  + P G +V+ +R
Sbjct: 61  FDLDLAWRLLKNYYKWRAECPEISA--DLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYR 118

Query: 72  LQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSK 130
           +  ++P  +   D  R+  ++ +  +  VE    G   +FD+ G +  H  +++     K
Sbjct: 119 IAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKK 178

Query: 131 FFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVP 190
               L +  P++++GIH++N   +   +  ++KPF+ + +   +H H      S+ +  P
Sbjct: 179 IAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP 238

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Homo sapiens (taxid: 9606)

>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 85/180 (47%), Gaps = 3/180 (1%)

Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHR 71
           FDL+ +   ++ Y+  R   PE  +  D+    +L   K    G +  +   G +V+ +R
Sbjct: 61  FDLDLAWRLMKNYYKWRAECPELSA--DLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYR 118

Query: 72  LQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSK 130
           +  ++P  +   D  R+  ++ +  +  VE    G   +FD+ G ++ H  +++     K
Sbjct: 119 IAYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKK 178

Query: 131 FFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVP 190
               L +  P++++GIH++N   +   +  ++KPF+ + +   +H H     SS+ +  P
Sbjct: 179 IAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFP 238

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Mus musculus (taxid: 10090)

>sp|A6JUQ6|CLVS2_RAT Clavesin-2 OS=Rattus norvegicus GN=Clvs2 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 22/253 (8%)

Query: 7   HHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQ 66
           HH   F L A       YF  R    + F       P +    K    G +A     G +
Sbjct: 64  HHFEAFRLLAQ------YFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRK 117

Query: 67  VIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSV 125
           ++      ++ S+Y   D +R + +S++A +   E  V G++ + D +        +L+ 
Sbjct: 118 ILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP 177

Query: 126 GQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSV 185
             L      LQ+  P R  GIH +N    I  +  V++PF+K+     +  H   +++S+
Sbjct: 178 SMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLH-GNNLNSL 236

Query: 186 YEFVPPKCIPGGDLKGDLP--DSKTLHNEYVEWMKNLVEF-FLQDEKYQVDESKRVKN-- 240
           ++ + P+ +P  +  G LP  D  T       W + L++  +  D +Y VD      N  
Sbjct: 237 HQLIHPEILP-SEFGGMLPPYDMGT-------WARTLLDHEYDDDSEYNVDSYSMPVNEV 288

Query: 241 -KKSAAKQLEKTQ 252
            K+ + K ++++Q
Sbjct: 289 DKELSPKSMKRSQ 301

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Rattus norvegicus (taxid: 10116)

>sp|Q95KF7|CLVS2_MACFA Clavesin-2 OS=Macaca fascicularis GN=CLVS2 PE=2 SV=2

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 23/247 (9%)

Query: 7   HHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQ 66
           HH   F L A       YF  R    + F       P +    K    G +A     G +
Sbjct: 64  HHFEAFRLLAQ------YFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRK 117

Query: 67  VIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSV 125
           ++      ++ S+Y   D +R + +S++A +   E  V G++ + D +        +L+ 
Sbjct: 118 ILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP 177

Query: 126 GQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSV 185
             L      LQ+  P R  GIH +N    I  +  V++PF+K+     +  H   +++S+
Sbjct: 178 SMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLH-GNNLNSL 236

Query: 186 YEFVPPKCIPGGDLKGDLP--DSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKS 243
           ++ + P+ +P  +  G LP  D  T       W + L+     D +Y  D    V +   
Sbjct: 237 HQLIHPEILP-SEFGGMLPPYDMGT-------WARTLL-----DHEYDDDSEYNVDSYSM 283

Query: 244 AAKQLEK 250
             K++EK
Sbjct: 284 PVKEVEK 290

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Macaca fascicularis (taxid: 9541)

>sp|Q5SYC1|CLVS2_HUMAN Clavesin-2 OS=Homo sapiens GN=CLVS2 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 23/247 (9%)

Query: 7   HHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQ 66
           HH   F L A       YF  R    + F       P +    K    G +A     G +
Sbjct: 64  HHFEAFRLLAQ------YFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRK 117

Query: 67  VIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSV 125
           ++      ++ S+Y   D +R + +S++A +   E  V G++ + D +        +L+ 
Sbjct: 118 ILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP 177

Query: 126 GQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSV 185
             L      LQ+  P R  GIH +N    I  +  V++PF+K+     +  H   +++S+
Sbjct: 178 SMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLH-GNNLNSL 236

Query: 186 YEFVPPKCIPGGDLKGDLP--DSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKS 243
           ++ + P+ +P  +  G LP  D  T       W + L+     D +Y  D    V +   
Sbjct: 237 HQLIHPEILP-SEFGGMLPPYDMGT-------WARTLL-----DHEYDDDSEYNVDSYSM 283

Query: 244 AAKQLEK 250
             K++EK
Sbjct: 284 PVKEVEK 290

Required for normal morphology of late endosomes and/or lysosomes in neurons (By similarity). Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Homo sapiens (taxid: 9606)

>sp|Q8BG92|CLVS2_MOUSE Clavesin-2 OS=Mus musculus GN=Clvs2 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 22/253 (8%)

Query: 7   HHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQ 66
           HH   F L A       YF  R    + F       P +    K    G +A     G +
Sbjct: 64  HHFEAFRLLAQ------YFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRK 117

Query: 67  VIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSV 125
           ++      ++ S+Y   D +R + +S++A +   E  V G++ + D +        +L+ 
Sbjct: 118 ILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP 177

Query: 126 GQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSV 185
             L      LQ+  P R  GIH +N    I  +  V++PF+K+     +  H   +++S+
Sbjct: 178 NMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLH-GNNLNSL 236

Query: 186 YEFVPPKCIPGGDLKGDLP--DSKTLHNEYVEWMKNLVEF-FLQDEKYQVDESK---RVK 239
           ++ + P+ +P  +  G LP  D  T       W + L++  +  D +Y VD      +  
Sbjct: 237 HQLIHPEILP-SEFGGMLPPYDMGT-------WARTLLDHEYDDDSEYNVDSYNMPVKDV 288

Query: 240 NKKSAAKQLEKTQ 252
           +K+ + K ++++Q
Sbjct: 289 DKELSPKSMKRSQ 301

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
193629582	316	PREDICTED: alpha-tocopherol transfer pro	0.892	0.737	0.525	5e-71
307195518	301	Alpha-tocopherol transfer protein-like [	0.946	0.820	0.423	3e-55
322796932	280	hypothetical protein SINV_10210 [Solenop	0.865	0.807	0.447	9e-55
307180475	369	Retinaldehyde-binding protein 1-like pro	0.908	0.642	0.441	1e-54
357631763	301	putative phosphatidylinositol transfer p	0.946	0.820	0.414	2e-54
345480694	271	PREDICTED: clavesin-2-like [Nasonia vitr	0.800	0.771	0.445	1e-51
239791236	210	ACYPI002017 [Acyrthosiphon pisum]	0.551	0.685	0.569	8e-47
332016273	420	Retinaldehyde-binding protein 1-like pro	0.931	0.578	0.401	9e-47
156545848	302	PREDICTED: alpha-tocopherol transfer pro	0.980	0.847	0.413	1e-45
380013460	342	PREDICTED: alpha-tocopherol transfer pro	0.969	0.739	0.393	1e-45

>gi|193629582|ref|XP_001944091.1| PREDICTED: alpha-tocopherol transfer protein-like [Acyrthosiphon pisum]

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 123/234 (52%), Positives = 171/234 (73%), Gaps = 1/234 (0%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK 60
           E LIL +HSC+FD+E ++ CIE+Y+T +T TPEFF+ RD+ RPEL+    V+++G +  +
Sbjct: 63  EMLILFYHSCFFDMEQTRICIEIYYTLKTETPEFFANRDVFRPELVNALNVLDYGCLPIR 122

Query: 61  TPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHV 120
            P  YQ+I+H+L+ FE +KYVF D V+LL M++DAC  V+GT PGYIFLFDM GVRLGH+
Sbjct: 123 NPNDYQIIYHKLRIFEANKYVFNDGVKLLIMAMDACFKVDGTCPGYIFLFDMRGVRLGHL 182

Query: 121 LRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEG 180
            RLS+  L KFF ++QEGLPVRLKGIH+LNT+ ++DKIM ++KPFMKK+LLS+VHF+ E 
Sbjct: 183 TRLSISSLRKFFTFIQEGLPVRLKGIHVLNTQSIVDKIMMLLKPFMKKELLSMVHFYTER 242

Query: 181 DISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDE 234
           D+  +Y  VP +C+   D  G     +  H  ++EWMK +   F  D +Y+ DE
Sbjct: 243 DVEKIYGAVPKECLL-EDYGGLAQSIEKTHAHFIEWMKLMKPLFENDYQYKCDE 295

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195518|gb|EFN77404.1| Alpha-tocopherol transfer protein-like [Harpegnathos saltator]

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/262 (42%), Positives = 167/262 (63%), Gaps = 15/262 (5%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQS-KVVEFGAIAP 59
           E L L  HSCYF+L+A++ C++VY+  RT  PEFFS RD +R E L  S + +EF A+  
Sbjct: 40  EQLALFAHSCYFNLDATRRCMDVYYRMRTTVPEFFSDRD-SRLEYLQHSLRALEFTALPR 98

Query: 60  KTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGH 119
               G+++IFHRL     S+Y+F D ++LL MSIDA L+ EG  PGY+FLFDM GV LGH
Sbjct: 99  PDRNGHRIIFHRLADTRASQYMFNDGIKLLLMSIDADLYTEGCSPGYVFLFDMHGVGLGH 158

Query: 120 VLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPE 179
           + RLS+  + ++F Y+QEG+PVRLK IHI+N    +DKI+ +++PFMK++L  ++H +  
Sbjct: 159 LTRLSINSIRRYFEYIQEGMPVRLKAIHIVNVVWFMDKILALIRPFMKRELYDMLHLYT- 217

Query: 180 GDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDE---------KY 230
           GD+S VY  +PP+C+P  D  G+L    +LH  +   +  L ++F ++E         K 
Sbjct: 218 GDVSDVYPHIPPECLP-KDFGGELDCVASLHKSHCTKLDQLRDYFAEEEDLFRNYAPNKA 276

Query: 231 QVDESKRVKNKKSAAKQLEKTQ 252
           +V   +R+   + AA    ++Q
Sbjct: 277 RVSNGQRI--TQDAANDSGRSQ 296

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322796932|gb|EFZ19284.1| hypothetical protein SINV_10210 [Solenopsis invicta]

 Score =  219 bits (558), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 152/228 (66%), Gaps = 2/228 (0%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK 60
           E L L  HSCYFD+EA+K C+ VY+  R   PEFFSKRD +   L    + +EF  +   
Sbjct: 41  EQLALFAHSCYFDMEATKRCMHVYYRMRATIPEFFSKRDSSLDYLQHSLRALEFVMLPKP 100

Query: 61  TPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHV 120
              G ++IFHRL    PS+Y+F D ++LL MS+DA L+ +G  PGYIFLFDM GVRLGH+
Sbjct: 101 DKNGNRIIFHRLADSRPSEYMFNDGIKLLLMSVDASLYTDGCSPGYIFLFDMVGVRLGHL 160

Query: 121 LRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEG 180
            RLS+  + ++F YLQEG+PVRLKGI++LN    +DK++ ++KPFMK++L  +++ +  G
Sbjct: 161 SRLSINSIRRYFEYLQEGMPVRLKGIYVLNAVWFMDKVLALIKPFMKRELYEMLYLY-TG 219

Query: 181 DISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDE 228
           ++S +Y  +PP+C+P  D  G+L    +LH  +   + +L  +F ++E
Sbjct: 220 NVSDIYPHIPPECLP-KDFGGELDCVASLHKTHCMKLDHLRNYFREEE 266

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180475|gb|EFN68493.1| Retinaldehyde-binding protein 1-like protein 2 [Camponotus floridanus]

 Score =  219 bits (557), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/247 (44%), Positives = 157/247 (63%), Gaps = 10/247 (4%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQS-KVVEFGAIAP 59
           E L L  HSCY+DL A++ C++VY+  R+  PEFF  RD   PE L QS K++EF A+  
Sbjct: 112 EQLALFTHSCYYDLTATERCMDVYYRMRSTIPEFFYDRD---PEYLQQSLKILEFVALPK 168

Query: 60  KTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGH 119
               G ++IFHRL     S+Y+F D ++LL MSIDA L+ EG  PGYIFLFDM  VRLGH
Sbjct: 169 PDRNGSRIIFHRLADSRSSRYMFNDGIKLLLMSIDADLYTEGCSPGYIFLFDMHNVRLGH 228

Query: 120 VLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPE 179
           + RLS+  +  FF YLQ+ +PVRLK IH+LN    +DKI+ +++PFMK++L  ++H H  
Sbjct: 229 LTRLSISSIRWFFEYLQDAMPVRLKAIHVLNAVWFMDKIIALIRPFMKRELYEMLHIH-T 287

Query: 180 GDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDE----KYQVDES 235
           GD+S +Y  +PP+C+P  D  G+L     LH  +   +  L ++F ++E     Y  +++
Sbjct: 288 GDVSDIYSHIPPECLP-KDYNGELDYVANLHEAHCMKLNQLRDYFREEETLFRNYSPNKA 346

Query: 236 KRVKNKK 242
           K   N+ 
Sbjct: 347 KIASNQN 353

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631763|gb|EHJ79232.1| putative phosphatidylinositol transfer protein [Danaus plexippus]

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 162/251 (64%), Gaps = 4/251 (1%)

Query: 3   LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTP 62
           L+L +++CY D+E SK+CIE Y+  R NTPE F  R ++  EL    + +EF  +  K+ 
Sbjct: 49  LLLFYNACYGDIERSKTCIERYYNLRKNTPEIFDNRCLSSDELQPSVEALEFSVLPEKSH 108

Query: 63  QGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLR 122
            GY +I+HRL   EPSKY F+   +LL M++DACLH  G  PGYIFLFDM GV+LGH+ R
Sbjct: 109 DGYDLIYHRLHYTEPSKYHFEPGCKLLFMTVDACLHKRGPQPGYIFLFDMQGVKLGHLTR 168

Query: 123 LSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEG-D 181
           +S+  L KFF Y+QE +PVR++ IH+ NT P++DK++ +++PFM K    ++ FH +  D
Sbjct: 169 VSLSSLRKFFQYVQEAMPVRMRAIHVFNTEPILDKLLLLIRPFMDKKFFDMIKFHHKNED 228

Query: 182 ISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVD---ESKRV 238
           + + Y+ V P+        G LPD++TLH + ++ +K L  +F  +E+ +++   + KR 
Sbjct: 229 LENFYQTVIPRSALPPLHGGTLPDTQTLHKKCMQTLKALEPYFKAEEEQRINALPDKKRD 288

Query: 239 KNKKSAAKQLE 249
           K  + + K L+
Sbjct: 289 KALERSFKHLD 299

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480694|ref|XP_001604241.2| PREDICTED: clavesin-2-like [Nasonia vitripennis]

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 142/211 (67%), Gaps = 2/211 (0%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK 60
           E L +  HSCY+D  A+  C++ Y+  R + P+FF KRD+         KVV +  +   
Sbjct: 44  EQLAIFAHSCYYDKSATLKCMDTYYRMRRDVPDFFKKRDVLLDHHQQNLKVVYYIELPKP 103

Query: 61  TPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHV 120
           +P+GY++I+H L+ +  S Y+  D+V  L M++D+ L+ EG VPG++FLFDM GVR GH+
Sbjct: 104 SPEGYRIIYHGLRNYNSSSYMLNDAVAALLMTVDSNLYTEGCVPGHVFLFDMRGVRPGHL 163

Query: 121 LRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEG 180
           LR+S+  L +FF YLQE +P+RLK IH+LN    +DK++ +V+PFMKK+L  ++H H  G
Sbjct: 164 LRVSITNLRRFFEYLQEAMPIRLKAIHVLNCVWFMDKVLSLVRPFMKKELFDILHLH-TG 222

Query: 181 DISSVYEFVPPKCIPGGDLKGDLPDSKTLHN 211
           D+S VY+++PP+C+P  D  G L D +TLH 
Sbjct: 223 DVSDVYQYIPPECLP-KDFGGRLDDVETLHG 252

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239791236|dbj|BAH72112.1| ACYPI002017 [Acyrthosiphon pisum]

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 82/144 (56%), Positives = 112/144 (77%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK 60
           E LIL +HSC+FD+E ++ CIE+Y+T +T TPEFF+ RD+ RPEL+    V+++G +  +
Sbjct: 63  EMLILFYHSCFFDMEQTRICIEIYYTLKTETPEFFANRDVFRPELVNALNVLDYGCLPIR 122

Query: 61  TPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHV 120
            P  YQ+I+H+L+ FE +KYVF D V+LL M++DAC  V+GT PGYIFLFDM GVRLGH+
Sbjct: 123 NPNDYQIIYHKLRIFEANKYVFNDGVKLLIMAMDACFKVDGTCPGYIFLFDMRGVRLGHL 182

Query: 121 LRLSVGQLSKFFLYLQEGLPVRLK 144
            RLS+  L KFF ++QEGLPVRL+
Sbjct: 183 TRLSISSLRKFFTFIQEGLPVRLR 206

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016273|gb|EGI57186.1| Retinaldehyde-binding protein 1-like protein 2 [Acromyrmex echinatior]

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 100/249 (40%), Positives = 152/249 (61%), Gaps = 6/249 (2%)

Query: 1   ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK 60
           E L L  HSCYFD+EA++ C+  Y++ R  TPE F+ RD +   L    +++EF AI PK
Sbjct: 167 EQLALFTHSCYFDIEATRRCMNAYYSIRATTPELFNNRDSSLEHLQHSLRILEF-AILPK 225

Query: 61  TPQGYQVIF-HRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGH 119
             Q    IF HRL    PS+Y+F DS++LL MS DA L+  G   G I + DMA +R GH
Sbjct: 226 PDQNGNWIFIHRLVDPRPSQYIFNDSLKLLFMSYDANLYTNGCSEGCILIVDMAKMRFGH 285

Query: 120 VLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPE 179
           +++LS+  L K   Y+QEG+P+RLKGI+++N    +DKI+ +++PFMK++L  ++H +  
Sbjct: 286 LIKLSINNLRKSLEYVQEGMPMRLKGIYVVNAIWFVDKIIALMRPFMKQELFEMIHIY-S 344

Query: 180 GDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVK 239
           GDIS +Y  + P+C+P  D  G+L     LH  +   +  L  +F ++E    + S    
Sbjct: 345 GDISDLYSHISPECLP-KDYGGELDCIANLHKAHCMKLDQLRNYFREEEALFRNYSP--N 401

Query: 240 NKKSAAKQL 248
           N ++A KQ+
Sbjct: 402 NARAATKQI 410

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545848|ref|XP_001606341.1| PREDICTED: alpha-tocopherol transfer protein-like [Nasonia vitripennis]

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/261 (41%), Positives = 159/261 (60%), Gaps = 5/261 (1%)

Query: 3   LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRD-INRPELLAQSKVVEFGAIAPKT 61
           L L  HS Y+ LE +K+ I+ ++T RT+ PEFFS RD +N  +LL   KVV    +   T
Sbjct: 45  LALFLHSNYYRLEPTKNTIDTFYTVRTHVPEFFSNRDPVNAKDLLQMFKVVMNMPLERTT 104

Query: 62  PQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVL 121
             GY VI+  L  FEPS Y +  +++L  M +D  L+ +GT+ G++ L D+ G+ +GHV 
Sbjct: 105 KDGYDVIYGALSDFEPSNYDYTFNMKLFGMVMDLWLYGKGTMKGHVILVDLKGLVIGHVA 164

Query: 122 RLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGD 181
           R S   L +F  YLQEGLPVRLKG H +NT P++D +M +++PFMKK+LL ++H H    
Sbjct: 165 RFSPMALKRFLYYLQEGLPVRLKGFHFVNTNPVMDILMNIMRPFMKKELLDILHLH--QS 222

Query: 182 ISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQ-VDESKRVKN 240
           ++++ EF  P  I   +  G    +K L    V+ ++   E+F+Q+EK Q +DESKR   
Sbjct: 223 VNAIEEFNIPVDILPNESGGKAGPAKELFAAEVKKLEAHREWFIQEEKTQRIDESKRPGK 282

Query: 241 KKSAAKQLEKTQVSLQKLELD 261
            KSA   L   + S +KLE+D
Sbjct: 283 AKSAT-DLFGVEGSFKKLEID 302

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013460|ref|XP_003690774.1| PREDICTED: alpha-tocopherol transfer protein-like [Apis florea]

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/262 (39%), Positives = 160/262 (61%), Gaps = 9/262 (3%)

Query: 3   LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRD-INRPELLAQSKVVEFGAIAPKT 61
           L L  HS Y+ +E +K+ I+ YFT +T+ PEFFS RD +   EL    + V    +  KT
Sbjct: 87  LALFLHSNYYKIEITKTTIDTYFTIKTHVPEFFSNRDPLGSKELRKAFQTVTIQVLENKT 146

Query: 62  PQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVL 121
           P+GY +++ RL   +PS YV+ D+++ L+M++D  LH EGT  G+I LFDM  V  GH  
Sbjct: 147 PEGYAILYGRLIDPDPSNYVYNDTMKYLSMTLDLWLHREGTTNGHIILFDMKNVVFGHAA 206

Query: 122 RLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGD 181
           RL+   L K+ +YLQE LPVRLKG H +N   ++D I+ ++KPFMKK+LL ++H H   D
Sbjct: 207 RLNPVGLKKYLIYLQEALPVRLKGFHFMNITSVMDVILNMMKPFMKKELLDMLHTHTTLD 266

Query: 182 ISSVYEFVPPKCIPG--GDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVK 239
             S  +F+P   +P   G   G L +    H + ++ +++  ++FLQ+EK  ++ES R+ 
Sbjct: 267 TLS--KFIPIDILPNETGGKAGPLME---FHKKTIKMLEDNRDWFLQEEKKVINESLRMG 321

Query: 240 NKKSAAKQLEKTQVSLQKLELD 261
             K+A   L   + + +KL++D
Sbjct: 322 KGKTAT-DLFGVEGTFKKLDID 342

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
FB|FBgn0029863	295	CG3823 [Drosophila melanogaste	0.927	0.820	0.295	9.4e-27
FB|FBgn0037323	315	CG2663 [Drosophila melanogaste	0.931	0.771	0.313	4e-26
FB|FBgn0023525	309	CG3191 [Drosophila melanogaste	0.854	0.721	0.326	7.8e-23
FB|FBgn0053966	310	CG33966 [Drosophila melanogast	0.946	0.796	0.276	6.3e-21
FB|FBgn0051636	313	CG31636 [Drosophila melanogast	0.919	0.766	0.277	3.6e-18
FB|FBgn0033437	313	CG12926 [Drosophila melanogast	0.950	0.792	0.227	4.6e-18
FB|FBgn0050339	308	CG30339 [Drosophila melanogast	0.938	0.795	0.237	1.2e-17
FB|FBgn0053514	311	CG33514 [Drosophila melanogast	0.969	0.813	0.249	2.5e-17
RGD|1305754	343	Ttpal "tocopherol (alpha) tran	0.812	0.618	0.271	3.5e-16
UNIPROTKB|Q5F355	300	TTPAL "Uncharacterized protein	0.689	0.6	0.252	6e-16

FB|FBgn0029863 CG3823 [Drosophila melanogaster (taxid:7227)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 78/264 (29%), Positives = 140/264 (53%)

Query:     8 HSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPK---TPQG 64
             H+   DL A++  +E+ +  R      F  RD   P   +  ++++   + P    TP+ 
Sbjct:    44 HTTRGDLSAAQRLLELNYGLRNKHAHIFIDRD---PLDASSQQLLQVADLVPLPGLTPEN 100

Query:    65 YQVIFHRLQQFEPSKYVFQDSVRLLAMSID---ACLHVEGTVPGYIFLFDMAGVRLGHVL 121
              +++F+RL  F+  K+ F  ++++  M  D   A  + E    G I +FDMAG  L H+ 
Sbjct:   101 NKLLFYRLIDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFDMAGYTLRHLT 160

Query:   122 RLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFH-PEG 180
             + ++G L  +  ++QE  PVRLK IH+LN    +DK+M VVKPF+K ++  L+HFH P  
Sbjct:   161 KTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNA 220

Query:   181 DISSVYEFVPPKCIP---GGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKR 237
             D  + Y   P   +P   GG+  G + D K    ++++ +K   ++ +  E +Q+++ K+
Sbjct:   221 D--TPYRHFPRSMLPEEYGGEA-GKMSDLKL---QWMQLLKEQRDYLMDTENWQINKIKK 274

Query:   238 VKNKKSAAKQLEKTQVSLQKLELD 261
                +KS+   + +    L+ LE+D
Sbjct:   275 NGQRKSSDSGVTE---GLRSLEID 295

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

FB|FBgn0037323 CG2663 [Drosophila melanogaster (taxid:7227)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 81/258 (31%), Positives = 131/258 (50%)

Query:    10 CYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIF 69
             C F LE  K  +++Y+T R   PEFFS RDINR EL      V    +   TP G ++ F
Sbjct:    67 CKFSLEKVKKKLDMYYTMRNAVPEFFSNRDINREELNIVLDYVHCPTLPGITPNGRRITF 126

Query:    70 HR-LQ-QFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVG 126
              R +   F+P   +  D++++  M  D  L  E   + G IF+ D +     H  + S  
Sbjct:   127 IRGIDCDFQPHHIL--DAMKVALMIGDVRLAEESVGIAGDIFILDASVASAAHFAKFSPT 184

Query:   127 QLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVY 186
              + KF + +QE  PV++K +H++N  PL+D I   VKPF+K+ + S + FH   D+ S+Y
Sbjct:   185 VVKKFLIAVQEAYPVKVKEVHVINISPLVDTIFNFVKPFVKEKIRSRITFH--NDVESLY 242

Query:   187 EFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVE---FFLQDEKYQVDESKRVKNKKS 243
             + VP   +P  +  G       L N++  W + LV+   +F   E  + +ES R    K+
Sbjct:   243 KVVPRDLLPN-EYGGKAGGVVEL-NQW--WKQKLVDNTQWFKDQEDKKANESLRPGAPKT 298

Query:   244 AAKQLEKTQVSLQKLELD 261
             +   L   + + ++L +D
Sbjct:   299 S-DDLFGMEGTFRQLNID 315

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0023525 CG3191 [Drosophila melanogaster (taxid:7227)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 83/254 (32%), Positives = 126/254 (49%)

Query:     8 HSCYF-DLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSK-VVEFGAIAPK---TP 62
             + C F D+E ++  IEV +  R   P  F KRD   P L A SK   ++  I P    TP
Sbjct:    64 YQCMFGDVEETRKLIEVNYALRNRHPHLFIKRD---P-LDADSKRTFDYADILPLPGLTP 119

Query:    63 QGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHV---EGTVP-----GYIFLFDMAG 114
                +V  +  ++FE SK    +  R   M  D C  V   +   P     G + +FDM G
Sbjct:   120 DKCKVSLYCFREFEASKMHHTEDTRAFFMVSD-CRFVTPDDLAKPDVLSEGEVQIFDMKG 178

Query:   115 VRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLV 174
               + H+ RL++  L  +  +LQ   PVRL+ IH++N    +D+I+ VVKPF+  ++  L+
Sbjct:   179 TTMRHISRLTISTLRAYIKFLQLAFPVRLRAIHMINCPTYLDRIVSVVKPFISDEVFKLI 238

Query:   175 HFHPEGDISSVYEFVPPKCIP---GGDLKGDLPDSKTLHNEYVEWMKNLVEF--FLQDEK 229
              FH +  I+++YEFVP + +P   GG   G L   +T H +     K LVE   +L D  
Sbjct:   239 RFHTQS-INTLYEFVPREMLPEEYGGGA-GSLEALRT-HTQ-----KALVEHRDYLMDPD 290

Query:   230 YQVDESKRVKNKKS 243
             + V      +N+ S
Sbjct:   291 HWVVVKPEKRNESS 304

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0053966 CG33966 [Drosophila melanogaster (taxid:7227)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 75/271 (27%), Positives = 131/271 (48%)

Query:     3 LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIA---- 58
             L+     C F LE +KS I+ ++T RT  PEF+   +++  + L   ++   G I     
Sbjct:    52 LVNFLRGCKFSLERTKSKIDRFYTLRTKYPEFYLGHNVDVDKAL---EIFRLGTIVILPR 108

Query:    59 PKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT--VPGYIFLFDMAGVR 116
             P    G ++   R+  ++PSKY  Q+  R   +     L  +    V G I + D++ V 
Sbjct:   109 PLNDNGPRLALLRMACYDPSKYTLQEVNRAAGLMQQIMLDEDDVAIVNGLISILDLSNVT 168

Query:   117 LGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHF 176
              GH L++S     K  ++ +E LP+R +GIH +NT    D I  ++KP M K     ++ 
Sbjct:   169 TGHFLQMSPSFAKKMTVFQEEALPLRPQGIHFINTPNGFDTIFNMIKPMMSKKQQGRLYV 228

Query:   177 HPEGDISSVYEFVPPKCIP---GGDLKGDLPDSKTLHNEYVEWMKNLVEF--FLQDEK-Y 230
             H      ++Y  +P + +P   GG+  G +P+   L     +W + ++ +  + ++EK Y
Sbjct:   229 HGS-KWEALYNQIPKQYLPVEYGGE-NGSIPE--LLQ----QWEQRILAYRNYWEEEKNY 280

Query:   231 QVDESKRVKNKKSAAKQLEKTQVSLQKLELD 261
               DES RV  +    + L   Q S ++L +D
Sbjct:   281 GTDESLRV-GQPVDFESLFGLQGSFRQLNVD 310

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0051636 CG31636 [Drosophila melanogaster (taxid:7227)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 73/263 (27%), Positives = 122/263 (46%)

Query:    12 FDLEASKSCIEVYFTTRTNTPEFFSKRDI-NRPELLAQSKVVEFGAIA--PKTPQ--GYQ 66
             F LE +K   + ++T + + PE F++R +   P++L    +V  G +   P      G +
Sbjct:    61 FSLERAKEKFDRFYTLQRSIPEVFNERRLATDPQVL---DIVRMGVLLQIPMDADDPGPR 117

Query:    67 VIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVE--GTVPGYIFLFDMAGVRLGHVLRLS 124
             V   R   ++ SK+ FQD +R+ +M  +  +  +   TV GY+ + DMAGV   H+  L 
Sbjct:   118 VTIIRAGSYDTSKHKFQDIIRVGSMFGEIMMFEDDNATVSGYVEIMDMAGVTGSHLFALQ 177

Query:   125 VGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISS 184
                LSKF  Y  E +P R KGIH +N     +     ++ F    + S +      D ++
Sbjct:   178 PQLLSKFSTYADEAMPTRQKGIHFINVPAAFETGFNSLRSFFPAKIKSRISV--SSDPAA 235

Query:   185 VYEFVPPKCIPG--GDLKGDLPD-SKTLH---NEYVEWMKNLVEFFLQDEKYQVDESKRV 238
             +YE V  K +P   G   G+L D S T+    + Y  + +    F   D+  +  + KR 
Sbjct:   236 IYELVRRKYLPQEYGGTGGNLQDISHTMEAKLSSYGPYFRESQNFGANDKLREFGDHKRG 295

Query:   239 KNKKSAAKQLEKTQVSLQKLELD 261
              ++ S          S +KLE+D
Sbjct:   296 NHRSSFG-----AVGSFRKLEID 313

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0033437 CG12926 [Drosophila melanogaster (taxid:7227)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 61/268 (22%), Positives = 121/268 (45%)

Query:     3 LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIA---- 58
             L+     C + LE +K  ++ ++  R   PE +  R +   +L     +++ G +     
Sbjct:    57 LVAFLRGCKYSLEKTKLKLDNFYAMRGAVPELYKNRIVGEKQL----SILDTGCLLRLPQ 112

Query:    59 PKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT--VPGYIFLFDMAGVR 116
             P    G ++   R  Q++  KY   + V++  M  +  +  +    + G++ + DM GV 
Sbjct:   113 PLQADGPRIHISRYGQYDSKKYSIAEVVQVNTMLGEIQIREDDNAMISGFVEIIDMKGVG 172

Query:   117 LGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHF 176
              GH+ +     + K  +   +  P R KG H +N     +K M + K  M + +    H 
Sbjct:   173 AGHLFQFDAVLVKKLAVLGDKAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHI 232

Query:   177 HPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVE---FFLQDEKYQVD 233
             H + D  S+Y++VP +C+P  +  G    + T+ +    W   L+    FF ++  Y  +
Sbjct:   233 HSKLD--SLYKYVPKECLPA-EYGGS---NGTIQDVVSTWRTKLLAYKPFFEEEASYGTN 286

Query:   234 ESKRVKNKKSAAKQLEKTQVSLQKLELD 261
             E  R + +  +A+ L   + S +KL++D
Sbjct:   287 EKLR-RGQPVSAESLFGIEGSFRKLDID 313

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

FB|FBgn0050339 CG30339 [Drosophila melanogaster (taxid:7227)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 61/257 (23%), Positives = 119/257 (46%)

Query:    10 CYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIF 69
             C F LE +KS ++ ++T +T  PE F KR ++   L+            P    G ++  
Sbjct:    59 CKFSLEKTKSKLDHFYTIKTLMPELFGKRLVDERNLILCRSGTYVRLPKPWGTDGPRLQL 118

Query:    70 HRLQQFEPSKYVFQDSVRLLAMSIDACLHVE--GTVPGYIFLFDMAGVRLGHVLRLSVGQ 127
                ++F+P ++   D  R   M  +  +  +    + GY+ + DMA + L  + +L    
Sbjct:   119 TNYEKFDPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTL 178

Query:   128 LSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYE 187
             + +  ++ ++  P RLKG+H++N       ++ + K  M   L     FH   ++  + E
Sbjct:   179 IKRMGIFAEKAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQ--RFHVYKNLEQLNE 236

Query:   188 FVPPKCIP---GGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESKRVKNKKSA 244
              +P + +P   GG+  G + D   +  E  + + +   +F +D +Y VDE  R   K+  
Sbjct:   237 VIPREYLPEEYGGN-NGRIAD---IQAEAEKKLLSYESYFAEDSQYGVDEQLR-PGKRVN 291

Query:   245 AKQLEKTQVSLQKLELD 261
             A  +   + S +KL++D
Sbjct:   292 ADSIFGAEGSFRKLDID 308

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0053514 CG33514 [Drosophila melanogaster (taxid:7227)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 66/265 (24%), Positives = 124/265 (46%)

Query:     3 LILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAI----A 58
             L+     C + LE +KS ++ Y+T +T  P++F  R  N  +   + ++ + GAI     
Sbjct:    53 LVAFLRGCKYSLERAKSKLDKYYTLKTKYPDYF--RVTNTTDSKFR-EIHQTGAIIYLPT 109

Query:    59 PKTPQGYQVIFHRLQQFEPSKYVFQDSVRLL-AMSIDACLHVE-GTVPGYIFLFDMAGVR 116
             P    G ++   R+      KY   + +++  AM   A L  +   V G +F+ DM G  
Sbjct:   110 PLNENGPRIGIWRMGLVPVEKYTMLECMQVAQAMQEIAILEDDYANVNGVVFIMDMKGAT 169

Query:   117 LGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHF 176
               H+ +++     KF ++ +E LP+RLK  H +NT    +++  + KP M K + S +  
Sbjct:   170 AAHLFQMTPSMAKKFTVFSEEALPLRLKAQHFINTITGFEQLFNMFKPMMSKKMQSRLFV 229

Query:   177 HPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKYQVDESK 236
             H    +  + E +P K +P  +  G+   ++ +     + +    +FF ++  +  DES 
Sbjct:   230 HGN-KMGLLTEQIPLKYLPE-EYGGENGTTQDIVAAMEKKLDEYADFFQENVNFGTDESL 287

Query:   237 RVKNKKSAAKQLEKTQVSLQKLELD 261
             R   K    + L   + S +KL +D
Sbjct:   288 R-PGKPIDFEGLFGVEGSFRKLNVD 311

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

RGD|1305754 Ttpal "tocopherol (alpha) transfer protein-like" [Rattus norvegicus (taxid:10116)]

 Score = 204 (76.9 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 60/221 (27%), Positives = 103/221 (46%)

Query:    12 FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKT-PQGYQVIFH 70
             FD + +   +  Y   R + PE FS     RP  L       F  + P T P+G  V+  
Sbjct:    91 FDYDRALQLLVNYHGCRRSWPEVFSNL---RPSALKDVLNSGFLTVLPHTDPRGCHVLCI 147

Query:    71 RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
             R  ++ PS Y   +++R + ++++  +  E T V G + L D  GV L            
Sbjct:   148 RPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGVVILADYKGVSLSKASHFGPFIAR 207

Query:   130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
             K    LQ+G P+R+K +HI+N   +   I  ++KPF+K+ + +    H   D+SS++  +
Sbjct:   208 KVIGILQDGFPIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS-DLSSLHTSL 266

Query:   190 PPKCIPG--GDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDE 228
             P   +P   G   G+L D+ + +   +    + V+ F Q E
Sbjct:   267 PRNILPKEYGGTAGEL-DTASWNAVLLASEDDFVKEFCQPE 306

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q5F355 TTPAL "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 47/186 (25%), Positives = 91/186 (48%)

Query:    12 FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKT-PQGYQVIFH 70
             FD + +   +  Y + R + PE F+     +P  +       F  + P+  P+G  V+  
Sbjct:    88 FDYDRALQLLVNYHSCRRSWPEVFNNL---KPSAIKPVLESGFVTVLPRLDPEGRHVVCI 144

Query:    71 RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
             R  ++ PS Y   +++R + ++++  +  E T V G + L D  GV L            
Sbjct:   145 RPDRWTPSHYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFVAK 204

Query:   130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
             K    LQ+G P+R+K ++I+N   +   I  ++KPF+K+ + +    H   D++S+++ +
Sbjct:   205 KVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANRFFLHGS-DLNSLHQNI 263

Query:   190 PPKCIP 195
             PP  +P
Sbjct:   264 PPVILP 269

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	261
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	7e-20
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	1e-15
smart00516	158	smart00516, SEC14, Domain in homologues of a S	1e-06

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 83.1 bits (206), Expect = 7e-20
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 62  PQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH--VEGTVPGYIFLFDMAGVRLGH 119
            +G  V++ R  + +P K   ++ VR L + ++  L    EG + G   + DM G+ L +
Sbjct: 11  KEGRPVLYLRPGRHDPKKSSLEELVRFLVLVLERALLLLPEGQIEGITVIIDMKGLSLSN 70

Query: 120 VLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPE 179
           + +  +  L K    LQ+  P RL  I I+N   + + I  ++KPF+       +HFH  
Sbjct: 71  MDKWPISFLKKILKILQDNYPERLGKILIVNAPWIFNVIWKLIKPFLDPKTREKIHFHKN 130

Query: 180 GDISSVYEFVPPKCIP---GGD 198
            ++  + +++PP+ +P   GG 
Sbjct: 131 SNLEELLKYIPPEQLPKEYGGT 152

Length = 152

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 4/144 (2%)

Query: 54  FGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSV-RLLAMSID-ACLHVEGTVPGYIFLFD 111
            G +  +  +G  V+  R    + SK +  + + R L  +++      +  V G++ + D
Sbjct: 10  VGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEGFVVIID 69

Query: 112 MAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLL 171
           + G+ L H L      L K    LQ+  P RLK ++I+N       +  +VKPF+ +   
Sbjct: 70  LKGLSLSH-LLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTR 128

Query: 172 SLVHFHPEGDISSVYEFVPPKCIP 195
             + F    D   + +++  + +P
Sbjct: 129 KKIVFL-GSDKEELLKYIDKEQLP 151

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 62  PQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLH---VEGTVPGYIFLFDMAGVRLG 118
             G  V+  R  +F+      ++ +R L   ++  L      G + G+  +FD+ G+ + 
Sbjct: 17  KDGRPVLIERAGRFDLKSVTLEELLRYLVYVLEKILQEEKKTGGIEGFTVIFDLKGLSMS 76

Query: 119 HVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHP 178
           +     +  L K    LQ+  P RL  ++I+N       +  ++KPF+ +     + F  
Sbjct: 77  NPD---LSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIKPFLDEKTREKIRFVG 133

Query: 179 EGDISSVYEFVPPKCIP---GGDLK 200
                 + E++  + +P   GG L 
Sbjct: 134 NDSKEELLEYIDKEQLPEELGGTLD 158

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
KOG1470|consensus	324		100.0
KOG1471|consensus	317		100.0
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	100.0
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.97
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.96
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.57
KOG4406|consensus	467		98.26
PF03765	55	CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr	98.23

>KOG1470|consensus

Probab=100.00  E-value=6.8e-41  Score=287.54  Aligned_cols=192  Identities=17%  Similarity=0.277  Sum_probs=174.2

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCccccCCCCCcHHHHHHhhhccccccCCCCCCCCEEEEEecCCCCCCCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYV   81 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~D~~G~~V~~~~~~~~d~~~~~   81 (261)
                      -++||||||+|||++|.+||.+++.||+++..-   .....+++...++.|.++ .+|.|++||||+|+++..+.++..+
T Consensus        51 cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~---~~~~~~Ev~~e~~tGK~y-i~G~D~~gRPVl~~~~~~~~qn~~t  126 (324)
T KOG1470|consen   51 CLLRFLRARKWNVKKASKMLSNTLKWRRSFGPE---EVIEADEVAAELETGKAY-ILGHDKDGRPVLYLRPRPHRQNTKT  126 (324)
T ss_pred             HHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCc---cccCHHHHHHHhhcCcEE-EecccCCCCeEEEEecCCCCCCCCC
Confidence            479999999999999999999999999998421   113345688899999999 9999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHhcc-CCCcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHHH
Q psy4447          82 FQDSVRLLAMSIDACLHV-EGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMF  160 (261)
Q Consensus        82 ~~~~~r~~~~~~e~~~~~-~~~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~  160 (261)
                      ..+..|+.+|++|.++.. +..++++++++|++|+|+++   +++...+.++.++|+||||||+..+++|+||+|..+|+
T Consensus       127 ~~~~~r~~Vy~mE~Ai~~lp~~qe~~~~L~D~~~fs~sN---~d~~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wk  203 (324)
T KOG1470|consen  127 QKELERLLVYTLENAILFLPPGQEQFVWLFDLTGFSMSN---PDIKFLKELLHILQDHYPERLGKALLVNAPWIFQPFWK  203 (324)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcceEEEEEecccCcccC---CCcHHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHH
Confidence            999999999999999764 33578899999999999995   57889999999999999999999999999999999999


Q ss_pred             HhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCC
Q psy4447         161 VVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDL  203 (261)
Q Consensus       161 ~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~  203 (261)
                      ++|||++++|++||.|+.+  ...|.+|||+++||. .|||+.
T Consensus       204 iikpflDp~t~~Kv~F~~~--~~~l~~~~d~~~l~s-~~GG~~  243 (324)
T KOG1470|consen  204 IIKPFLDPKTASKVKFVEP--KDDLSEYFDESQLPS-LFGGKL  243 (324)
T ss_pred             HhhhccChhhhceeEEecC--hhHHHhhCCccccch-hhCCCc
Confidence            9999999999999999976  567999999999999 999976

>KOG1471|consensus

Probab=100.00  E-value=4.4e-38  Score=278.23  Aligned_cols=199  Identities=26%  Similarity=0.462  Sum_probs=163.5

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhC--CccccCCCCCcHHHHHHhhhccccccCCCCCCCCEEEEEecCCCCCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNT--PEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSK   79 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~--~~~~~~~~~~~~~~~~~l~~g~~~~~l~~D~~G~~V~~~~~~~~d~~~   79 (261)
                      +|+||||||+||+++|++++.+++.||+++  ++++.+.+. .+++.+....+    ..+.|++|+|+.+.+.|..++..
T Consensus        47 ~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~~~~-~~~~~~~~~~~----~~~~~~~g~~v~~~~~g~~~~~~  121 (317)
T KOG1471|consen   47 NLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFEDFEE-DDELLKYYPQG----LHGVDKEGRPVYIERLGKIDPKG  121 (317)
T ss_pred             HHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhcccc-chhhhhhcccc----ccccCCCCCEEEEeccCCCCccc
Confidence            799999999999999999999999998886  566665322 12233211111    22389999999999999887654


Q ss_pred             C----C--------HHHHHHHHHHHHHHHhccCC-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeeee
Q psy4447          80 Y----V--------FQDSVRLLAMSIDACLHVEG-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGI  146 (261)
Q Consensus        80 ~----~--------~~~~~r~~~~~~e~~~~~~~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i  146 (261)
                      +    .        ..+..+.+.+.+|.+..+.+ +++|++.|+|++|++++|+++..++.+++++.++|++||++++++
T Consensus       122 l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~  201 (317)
T KOG1471|consen  122 LLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRI  201 (317)
T ss_pred             ceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceE
Confidence            3    3        34555555566666665444 599999999999999999998999999999999999999999999


Q ss_pred             EEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCCh
Q psy4447         147 HILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDS  206 (261)
Q Consensus       147 ~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~  206 (261)
                      ||||+|++|+++|+++||||+++|++||++..+++.++|.++||+++||. +|||+++..
T Consensus       202 ~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~k~i~~~~LP~-~yGG~~~~~  260 (317)
T KOG1471|consen  202 HIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLLKYIPPEVLPE-EYGGTCGDL  260 (317)
T ss_pred             EEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhhhhCCHhhCcc-ccCCCcccc
Confidence            99999999999999999999999999999443334999999999999999 999999865

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=100.00  E-value=1.6e-34  Score=230.30  Aligned_cols=153  Identities=25%  Similarity=0.440  Sum_probs=125.8

Q ss_pred             HhhhccccccCCCCCCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhcc-C--CCcCcEEEEEeCCCCCcccccccC
Q psy4447          48 QSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHV-E--GTVPGYIFLFDMAGVRLGHVLRLS  124 (261)
Q Consensus        48 ~l~~g~~~~~l~~D~~G~~V~~~~~~~~d~~~~~~~~~~r~~~~~~e~~~~~-~--~~~~g~v~I~D~~g~s~~~~~~~~  124 (261)
                      +.+.+..+ ..|+|++||||++++++++|++.++.+++.+++++++|.+++. +  .++.|+++|+|++|++++++....
T Consensus         3 ~~~~~~~~-~~g~D~~gr~v~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~iiD~~g~~~~~~~~~~   81 (159)
T PF00650_consen    3 ILKSGPFY-LHGRDKDGRPVIYIRLGRFDPKKFSPEDVIRFFVYLLERMLKRMPEGGQVEGIVVIIDLSGFSLSNFDWWP   81 (159)
T ss_dssp             HHTTSCEE-EEEE-TTS-EEEEEEGTT--HHTS-HHHHHHHHHHHHHHHHHTHHHTSHHH-EEEEEE-TT--HHHHHCHH
T ss_pred             HHCCeeEE-ECCCCCCcCEEEEEEcccCCCCcCCHHHHHHHHHHHHHHHHhhhcccccceeEEEEEeCCCceEeccccch
Confidence            34555555 5559999999999999999999999999999999999998842 2  358999999999999999887555


Q ss_pred             HHHHHHHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCC-CChhhhhhhcCCCCCCCCCCCCC
Q psy4447         125 VGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPE-GDISSVYEFVPPKCIPGGDLKGD  202 (261)
Q Consensus       125 ~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~-~~~~~L~~~i~~~~LP~~~yGG~  202 (261)
                      ++.++.+++++|++||+|++++||||+|++|+++|++++|||+++|++||+++++ ++.++|.++||+++||+ +|||+
T Consensus        82 ~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~~l~~~i~~~~lP~-~~GG~  159 (159)
T PF00650_consen   82 ISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSDWKAKLKEYIDPEQLPV-EYGGT  159 (159)
T ss_dssp             HHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTCHCHHHCCCSTGGGSBG-GGTSS
T ss_pred             hhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcccHHHHHhhCCHhHCch-hcCCC
Confidence            8899999999999999999999999999999999999999999999999999954 44579999999999999 99996

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>smart00516 SEC14 Domain in homologues of a S

Probab=99.97  E-value=3e-31  Score=211.12  Aligned_cols=141  Identities=22%  Similarity=0.464  Sum_probs=132.3

Q ss_pred             CCCCCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhcc---CCCcCcEEEEEeCCCCCcccccccCHHHHHHHHHHh
Q psy4447          59 PKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHV---EGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYL  135 (261)
Q Consensus        59 ~~D~~G~~V~~~~~~~~d~~~~~~~~~~r~~~~~~e~~~~~---~~~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~  135 (261)
                      |.|++||||+++++++++++..+.+++++++++++|.++.+   +.++.|+++|+|++|++++|   ++++.+|.++.++
T Consensus        14 g~D~~GrpV~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~lk~~~~~~   90 (158)
T smart00516       14 GYDKDGRPVLIFRAGRFDLKSVTLEELLRYLVYVLEKILQREKKTGGIEGFTVIFDLKGLSMSN---PDLSVLRKILKIL   90 (158)
T ss_pred             CCCCCcCEEEEEeccccccCcCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEEEEECCCCCccc---ccHHHHHHHHHHH
Confidence            58999999999999999999999999999999999998865   33589999999999999987   4678999999999


Q ss_pred             hccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCC
Q psy4447         136 QEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDL  203 (261)
Q Consensus       136 q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~  203 (261)
                      |++||+|++++||||+|++++++|+++++|+++++++||+++++++.++|.++||+++||+ +|||++
T Consensus        91 ~~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~L~~~i~~~~lP~-~~GG~~  157 (158)
T smart00516       91 QDHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDPEQLPE-ELGGTL  157 (158)
T ss_pred             HHHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCCCHHHHHhhCCHhhCcH-hhCCCC
Confidence            9999999999999999999999999999999999999999997655799999999999999 999986

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.96  E-value=4.5e-29  Score=197.12  Aligned_cols=146  Identities=23%  Similarity=0.422  Sum_probs=130.6

Q ss_pred             cccccCC-CCCCCCEEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHhccCCC-cCcEEEEEeCCCCCcccccccCHHHHH
Q psy4447          53 EFGAIAP-KTPQGYQVIFHRLQQFEPSK-YVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS  129 (261)
Q Consensus        53 ~~~~~l~-~D~~G~~V~~~~~~~~d~~~-~~~~~~~r~~~~~~e~~~~~~~~-~~g~v~I~D~~g~s~~~~~~~~~~~~k  129 (261)
                      .+. +.+ +|++||||+++++++.++.. .+.++.+++.++.+|.++.++.. ..|+++|+|++|++++++. .+.+.+|
T Consensus         9 ~~~-~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~D~~~~~~~~~~-~~~~~~k   86 (157)
T cd00170           9 KVG-YLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEGFVVIIDLKGLSLSHLL-PDPSLLK   86 (157)
T ss_pred             ccc-ccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhhhhhcccceEEEEECCCCChhccc-hhHHHHH
Confidence            444 555 79999999999999766544 34599999999999999876654 5799999999999999886 6778999


Q ss_pred             HHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCC
Q psy4447         130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGD  202 (261)
Q Consensus       130 ~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~  202 (261)
                      +++.++|++||++++++||||+|++++++|+++++|+++++++||++++++ .++|.+++|+++||. +|||+
T Consensus        87 ~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~-~~~L~~~i~~~~Lp~-~~GG~  157 (157)
T cd00170          87 KILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSD-KEELLKYIDKEQLPE-EYGGT  157 (157)
T ss_pred             HHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCC-HHHHHhhCChhhCcH-hhCCC
Confidence            999999999999999999999999999999999999999999999999754 799999999999999 99996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.57  E-value=2e-15  Score=119.19  Aligned_cols=136  Identities=20%  Similarity=0.324  Sum_probs=95.1

Q ss_pred             CCCCCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhccCCCcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhcc
Q psy4447          59 PKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEG  138 (261)
Q Consensus        59 ~~D~~G~~V~~~~~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~  138 (261)
                      |+|++||||+++...+. ++.   .+..+++.|++.....+ -...++++|+|++|.+..+-  .+.+.++++...++..
T Consensus         8 G~d~~g~pV~~~~~~~~-~~~---~~~~~ll~yl~~~l~~~-~~~~~f~vVid~~~~~~~~~--~~~~~l~~~~~~l~~~   80 (149)
T PF13716_consen    8 GRDREGRPVVVFIASRL-PSS---DDLERLLLYLLSTLSEE-VVDKPFSVVIDHTGFSRSSE--PSLSWLKQLYKLLPRK   80 (149)
T ss_dssp             EEBTTS-EEEEEEGGG--C-T---THHHHHHHHHHHHH-TT-TTTS-EEEEEE-TT--GGG-----HHHHHHTTTSS-HH
T ss_pred             ccCCCcCEEEEEECCcC-cch---hhHHHHHHHHHHhhhHH-hcCCCEEEEEEcCCCccccC--CchHHHHHHHHHHHHH
Confidence            39999999999998777 433   36666666666655332 12467999999999987542  3567899999999999


Q ss_pred             ccceeeeeEEEeCchHHHHHH-HHhhhcchHHh-hcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCC
Q psy4447         139 LPVRLKGIHILNTRPLIDKIM-FVVKPFMKKDL-LSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLP  204 (261)
Q Consensus       139 yP~rl~~i~iiN~P~~f~~~~-~~vk~fl~~~~-~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~  204 (261)
                      |+..+++++|||++++++.+. .+.+++.+++. ..||.++.+  .++|.+|||+++||. ++||+.+
T Consensus        81 ~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~s--l~~L~~~i~~~qL~~-~lp~~~~  145 (149)
T PF13716_consen   81 YKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSS--LSELSKHIDPSQLPE-SLPGVLQ  145 (149)
T ss_dssp             HHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESS--TCGGGGTSGGGG-------HHH-
T ss_pred             HhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECC--HHHHHhhCCHHHhcc-cCCCEEe
Confidence            999999999999999999999 56678889988 899999887  999999999999999 9998763

>KOG4406|consensus

Probab=98.26  E-value=8.6e-06  Score=72.48  Aligned_cols=137  Identities=15%  Similarity=0.207  Sum_probs=98.0

Q ss_pred             HHHHhhh--ccccccCC--CCCCCCEEEEEecCCCCCC-CCCHHHHHHHHHHHHHHHhccCCCcCcEEEEEeCCCCCccc
Q psy4447          45 LLAQSKV--VEFGAIAP--KTPQGYQVIFHRLQQFEPS-KYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGH  119 (261)
Q Consensus        45 ~~~~l~~--g~~~~~l~--~D~~G~~V~~~~~~~~d~~-~~~~~~~~r~~~~~~e~~~~~~~~~~g~v~I~D~~g~s~~~  119 (261)
                      +..+.+.  +.+. +.+  .|+.||+|+++-..++.+. .+.-..++++.++.++..++++     ++.+.=-.|+...+
T Consensus        71 fyd~~~H~~ei~q-vi~~~~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~id~~Ve~D-----Yt~vYfh~gl~s~n  144 (467)
T KOG4406|consen   71 FYDIARHEREILQ-VIGDAKDKQGRKIIVVYACRLPSSSELDDIRLISYLVYTIDKYVEND-----YTLVYFHHGLPSDN  144 (467)
T ss_pred             HHHHHHhhhheee-eccCcccccCCeeEEEEEecCCchhhhhhHHHHHHHHHHHHHHHhcc-----ceeeehhcCCcccc
Confidence            4344433  6666 777  5999999999988776543 3333448889999999887654     44444445554433


Q ss_pred             ccccCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCC
Q psy4447         120 VLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPP  191 (261)
Q Consensus       120 ~~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~  191 (261)
                      -  ...+.+.....-+-.+|---++.+|+|.+-|+..++|+++||+++.|..+||+-+..  .++|.+++.-
T Consensus       145 k--p~l~~l~~aYke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n~--lseL~~~l~l  212 (467)
T KOG4406|consen  145 K--PYLQLLFDAYKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFNS--LSELFEALKL  212 (467)
T ss_pred             c--chHHHHHHHHHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEeeh--HHHHHHhhhh
Confidence            2  223344443333444577889999999999999999999999999999999988876  8899887653

>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=98.23  E-value=1.1e-06  Score=57.07  Aligned_cols=23  Identities=17%  Similarity=0.190  Sum_probs=20.7

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHH
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVY   24 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~   24 (261)
                      +|+||||||+|||++|.+||.+|
T Consensus        33 ~llRFLRARkf~v~~A~~mL~~t   55 (55)
T PF03765_consen   33 FLLRFLRARKFDVEKAFKMLKKT   55 (55)
T ss_dssp             HHHHHHHHTTT-HHHHHHHHHHH
T ss_pred             HHHHHHHHccCCHHHHHHHHHhC
Confidence            79999999999999999999875

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1AUA_A 3Q8G_A 3B7Q_B 3B7Z_A 3B7N_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	261
1oip_A	278	The Molecular Basis Of Vitamin E Retention: Structu		5e-12
1r5l_A	262	Crystal Structure Of Human Alpha-tocopherol Transfe		1e-11
3hy5_A	316	Crystal Structure Of Cralbp Length = 316		8e-09
3hx3_A	316	Crystal Structure Of Cralbp Mutant R234w Length = 3		4e-07

>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHR 71
           FDL+ +   ++ Y+  R   PE  +  D++   ++   K    G +  + P G +V+ +R
Sbjct: 61  FDLDLAWRLLKNYYKWRAECPEISA--DLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYR 118
Query: 72  LQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSK 130
           +  ++P  +   D  R+  ++ +  +  VE    G   +FD+ G +  H  +++     K
Sbjct: 119 IAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKK 178
Query: 131 FFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVP 190
               L +  P++++GIH++N   +   +  ++KPF+ + +   +H H      S+ +  P
Sbjct: 179 IAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP 238

>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHR 71
           FDL+ +   ++ Y+  R   PE  +  D++   ++   K    G +  + P G +V+ +R
Sbjct: 45  FDLDLAWRLLKNYYKWRAECPEISA--DLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYR 102
Query: 72  LQQFEPSKYVFQDSVRLLAMSIDACLH-VEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSK 130
           +  ++P  +   D  R+  ++ +  +  VE    G   +FD+ G +  H  +++     K
Sbjct: 103 IAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKK 162
Query: 131 FFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVP 190
               L +  P++++GIH++N   +   +   +KPF+ + +   +H H      S+ +  P
Sbjct: 163 IAAVLTDSFPLKVRGIHLINEPVIFHAVFSXIKPFLTEKIKERIHXHGNNYKQSLLQHFP 222

>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 7/195 (3%)
Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEF-GAIAPKTPQGYQVIFH 70
           F++  +   +  Y   R   PE F   D   PE +  +    + G ++ +   G  V+  
Sbjct: 104 FNVGRAYELLRGYVNFRLQYPELF---DSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLF 160
Query: 71  RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
            ++ ++  +  F + ++     ++  L  E T + G+  + +  G  +     L    L 
Sbjct: 161 NIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLR 220
Query: 130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
           K    LQ+  P R K IH ++          VVKPF+K  LL  V  H + D+S  Y+ +
Sbjct: 221 KMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGD-DLSGFYQEI 279
Query: 190 PPKCIPGGDLKGDLP 204
               +P  D  G LP
Sbjct: 280 DENILP-SDFGGTLP 293

>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 7/195 (3%)
Query: 12  FDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEF-GAIAPKTPQGYQVIFH 70
           F++  +   +  Y   R   PE F   D   PE +  +    + G ++ +   G  V   
Sbjct: 104 FNVGRAYELLRGYVNFRLQYPELF---DSLSPEAVRCTIEAGYPGVLSSRDKYGRVVXLF 160
Query: 71  RLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLS 129
            ++ ++  +  F + ++     ++  L  E T + G+  + +  G        L    L 
Sbjct: 161 NIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTXQQAASLRTSDLR 220
Query: 130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFV 189
           K    LQ+  P   K IH ++          VVKPF+K  LL  V  H + D+S  Y+ +
Sbjct: 221 KXVDXLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGD-DLSGFYQEI 279
Query: 190 PPKCIPGGDLKGDLP 204
               +P  D  G LP
Sbjct: 280 DENILP-SDFGGTLP 293

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	261
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	2e-52
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	7e-49
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	1e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	4e-04
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	6e-04

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score =  170 bits (433), Expect = 2e-52
 Identities = 39/224 (17%), Positives = 96/224 (42%), Gaps = 5/224 (2%)

Query: 8   HSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQV 67
            +  FDL+ +   ++ Y+  R   PE  +        ++   K    G +  + P G +V
Sbjct: 41  RARDFDLDLAWRLLKNYYKWRAECPEISADLH--PRSIIGLLKAGYHGVLRSRDPTGSKV 98

Query: 68  IFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVG 126
           + +R+  ++P  +   D  R+  ++ +  +    T   G   +FD+ G +  H  +++  
Sbjct: 99  LIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPS 158

Query: 127 QLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVY 186
              K    L +  P++++GIH++N   +   +  ++KPF+ + +   +H H      S+ 
Sbjct: 159 VAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLL 218

Query: 187 EFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEKY 230
           +   P  +P  +  G+    + +  E+  ++    ++     + 
Sbjct: 219 QH-FPDILP-LEYGGEEFSMEDICQEWTNFIMKSEDYLSSISES 260

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score =  162 bits (413), Expect = 7e-49
 Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 12/226 (5%)

Query: 8   HSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQV 67
            +  F++  +   +  Y   R   PE F         +    +    G ++ +   G  V
Sbjct: 100 RARKFNVGRAYELLRGYVNFRLQYPELFDSLSP--EAVRCTIEAGYPGVLSSRDKYGRVV 157

Query: 68  IFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVG 126
           +   ++ ++  +  F + ++     ++  L  E T + G+  + +  G  +     L   
Sbjct: 158 MLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTS 217

Query: 127 QLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVY 186
            L K    LQ+  P   K IH ++          VVKPF+K  LL  V  H + D+S  Y
Sbjct: 218 DLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGD-DLSGFY 276

Query: 187 EFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLV--EFFLQDEKY 230
           + +    +P  D  G LP       +     + L   +   ++  +
Sbjct: 277 QEIDENILP-SDFGGTLPKY-----DGKAVAEQLFGPQAQAENTAF 316

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score = 71.9 bits (176), Expect = 1e-14
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 9/196 (4%)

Query: 51  VVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLF 110
               G +  K       +     + +  +   ++   LL         +   V     ++
Sbjct: 100 YDIIGPLDAKG------LLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIY 153

Query: 111 DMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDL 170
           D  G+ L H+ + +V    +F    +E  P  LK + ++    L      ++KPF+ +D 
Sbjct: 154 DCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDT 213

Query: 171 LSLVHFHPEGDISSVYEFVPPKCIP---GGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQD 227
              +          + + + P  +P   GG +     + K               +    
Sbjct: 214 RKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQ 273

Query: 228 EKYQVDESKRVKNKKS 243
            K Q + S ++    S
Sbjct: 274 VKQQYEHSVQISRGSS 289

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 48/296 (16%), Positives = 92/296 (31%), Gaps = 96/296 (32%)

Query: 22  EVYFTTRT---NTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPS 78
            +Y   R    N  + F+K +++R +   + +                     L +  P+
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA-------------------LLELRPA 150

Query: 79  KYVFQD-------SVRLLAMSIDACL--HVEGTVPGYIFLFDMAGVR-----LGHVLRLS 124
           K V  D       +   +A  +D CL   V+  +   IF  ++         L  + +L 
Sbjct: 151 KNVLIDGVLGSGKTW--VA--LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 125 VGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSL--V-------H 175
             Q+   +    +        IH +       + +   KP+ +  LL L  V        
Sbjct: 207 Y-QIDPNWTSRSDHSSNIKLRIHSIQAE---LRRLLKSKPY-ENCLLVLLNVQNAKAWNA 261

Query: 176 FHPEGDIS----------SVYEFVPP---KCIPGGDLKGDL--PDSKTLHNEYVEWMK-- 218
           F    ++S           V +F+       I        L   + K+L  +Y++  +  
Sbjct: 262 F----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQ 316

Query: 219 --------------NLVEFFLQDEKYQVDESKRVKNKKSAAKQLEKT-QVSLQKLE 259
                         +++   ++D     D  K V   K     L    + SL  LE
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK-----LTTIIESSLNVLE 367

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 5e-04
 Identities = 40/252 (15%), Positives = 73/252 (28%), Gaps = 77/252 (30%)

Query: 11  YFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFH 70
            F+L    SC ++  TTR               + L+ +                  + H
Sbjct: 261 AFNL----SC-KILLTTR----------FKQVTDFLSAATTTHI------------SLDH 293

Query: 71  RLQQFEPSKYVFQDSVRLLAMSID---ACLHVE--GTVPGYIFLF-----DMAGV----- 115
                 P +        LL   +D     L  E   T P  + +      D         
Sbjct: 294 HSMTLTPDE-----VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 116 -----RLGHVLRLSVGQLS-----KFFLYL---QEGLPVRLKGIHILNTRPLIDKIMFVV 162
                +L  ++  S+  L      K F  L        +    + ++    +   +M VV
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 163 KPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVE 222
               K    SLV   P+    S+            +LK  L +   LH       +++V+
Sbjct: 409 NKLHKY---SLVEKQPKESTISIPSIYL-------ELKVKLENEYALH-------RSIVD 451

Query: 223 FFLQDEKYQVDE 234
            +   + +  D+
Sbjct: 452 HYNIPKTFDSDD 463

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 17/191 (8%)

Query: 32  PEFFSKRDIN-RPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLA 90
           P+++   D + RP         E G I  K       ++    + +  + + ++      
Sbjct: 120 PQYYHHVDKDGRPLY-----FAELGGINLKK------MYKITTEKQMLRNLVKEYELFAT 168

Query: 91  MSIDACLHVEGT-VPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHIL 149
             + AC    G  +     + D+ G+ L +   + +  +       Q   P R+   +I+
Sbjct: 169 YRVPACSRRAGYLIETSCTVLDLKGISLSNAYHV-LSYIKDVADISQNYYPERMGKFYII 227

Query: 150 NTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIP---GGDLKGDLPDS 206
           ++      +  +VKPF+    +S +          + + +P + +P   GG      P+ 
Sbjct: 228 HSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLPVKYGGTSVLHNPND 287

Query: 207 KTLHNEYVEWM 217
           K  +++   W 
Sbjct: 288 KFYYSDIGPWR 298

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 32/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 24  YFTTRTNTPEFFSKRDIN-RPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVF 82
                   P+++ K D + RP    +   V    +   T +   +    + ++E      
Sbjct: 97  KPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL-VWEYE-----S 150

Query: 83  QDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVR 142
               RL A S  A   VE +      + D+ G+ +     + +  + +     Q   P R
Sbjct: 151 VVQYRLPACSRAAGHLVETSC----TIMDLKGISISSAYSV-MSYVREASYISQNYYPER 205

Query: 143 LKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIP---GGDL 199
           +   +I+N          + KPF+    +S +          + + +P + +P   GG  
Sbjct: 206 MGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKS 265

Query: 200 KGDLPDSKTLHNEYVEWM 217
           + D        ++   W 
Sbjct: 266 EVDESKGGLYLSDIGPWR 283

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	261
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	100.0
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	100.0
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	100.0
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	100.0
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	100.0
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	99.32
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.11

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=100.00  E-value=8.3e-54  Score=367.48  Aligned_cols=223  Identities=17%  Similarity=0.389  Sum_probs=207.4

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCccccCCCCCcHHHHHHhhhccccccCC-CCCCCCEEEEEecCCCCCCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAP-KTPQGYQVIFHRLQQFEPSKY   80 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~-~D~~G~~V~~~~~~~~d~~~~   80 (261)
                      +|+||||||+||+++|.++|++|++||+++|+++.+.++  +++.+.++.|++. +++ +|++||||+++++|++|++.+
T Consensus        35 ~LlRFLra~k~dv~~A~~~l~~~l~wR~~~~~i~~~~~~--~~~~~~~~~g~~~-~l~g~D~~GrpV~i~~~~~~d~~~~  111 (262)
T 1r5l_A           35 FLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP--RSIIGLLKAGYHG-VLRSRDPTGSKVLIYRIAHWDPKVF  111 (262)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHCHHHHSCCCG--GGTHHHHHTTCEE-ECSSCCTTCCEEEEEEGGGCCTTTS
T ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHHhChHhhhcCCh--HHHHHHHHcCCcc-CCCCcCCCCCEEEEEeccccCcccC
Confidence            799999999999999999999999999999887776655  4577888899887 777 999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhccCC-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHH
Q psy4447          81 VFQDSVRLLAMSIDACLHVEG-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIM  159 (261)
Q Consensus        81 ~~~~~~r~~~~~~e~~~~~~~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~  159 (261)
                      +..+++|+.++++|.++.+++ ++.|+++|+|++|+|++|+.+++++.+|.++.++|++||+|++++||||+|++|+++|
T Consensus       112 ~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~  191 (262)
T 1r5l_A          112 TAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVF  191 (262)
T ss_dssp             CHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCHHHHhccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHH
Confidence            999999999999999887654 4789999999999999999888899999999999999999999999999999999999


Q ss_pred             HHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhHHHHHhhcc
Q psy4447         160 FVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEK  229 (261)
Q Consensus       160 ~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~~~~~~~w~~~l~~~~~~~~~~~~  229 (261)
                      +++||||+++|++||+|+++++.++|.++|| ++||+ +|||++++++++++.|.+.+.++++||.+.+.
T Consensus       192 ~~vkpfl~~~t~~Ki~~~~~~~~~~L~~~i~-~~LP~-~yGG~~~~~~~~~~~w~~~l~~~~~~~~~~~~  259 (262)
T 1r5l_A          192 SMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPL-EYGGEEFSMEDICQEWTNFIMKSEDYLSSISE  259 (262)
T ss_dssp             HHHGGGSCHHHHTTEEECCSSCHHHHHHHST-TTSCG-GGTCSSCCHHHHHHHHHHHHHHTHHHHHHTCC
T ss_pred             HHHHHhcCHHHHhheEEeCCCcHHHHHHHhh-hhCcH-hhCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999997666799999999 99999 99999999999999999999999999998653

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=100.00  E-value=1.1e-50  Score=357.12  Aligned_cols=211  Identities=19%  Similarity=0.360  Sum_probs=195.0

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCccccCCCCCcHHHHHHhhhccccccCC-CCCCCCEEEEEecCCCCCCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDINRPELLAQSKVVEFGAIAP-KTPQGYQVIFHRLQQFEPSKY   80 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~-~D~~G~~V~~~~~~~~d~~~~   80 (261)
                      +|+||||||+||+++|.++|++|++||+++|++|.+.++  +++++.++.|++. +++ +|++||||+++++|++|++++
T Consensus        94 ~LlRFLRarkfdv~kA~~~L~~~l~wR~~~~~~~~~~~~--~~i~~~l~~g~~~-~l~g~Dk~GrpVii~r~g~~d~~~~  170 (316)
T 3hx3_A           94 FFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSP--EAVRCTIEAGYPG-VLSSRDKYGRVVMLFNIENWQSQEI  170 (316)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHCGGGTTTCCH--HHHHHHHHTTSSE-ECSSCCTTSCEEEEEECTTCCTTTS
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHhCchhhcCCCH--HHHHHHHHcCCcc-ccCCCCCCCCEEEEEecccCCCCCC
Confidence            799999999999999999999999999999988877654  6788889999988 886 999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhccCC-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHH
Q psy4447          81 VFQDSVRLLAMSIDACLHVEG-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIM  159 (261)
Q Consensus        81 ~~~~~~r~~~~~~e~~~~~~~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~  159 (261)
                      +.++++|++++++|.++.+++ ++.|+++|+|++|+|++|+++++++.+|+++.++|++||+|++++||||+|++|+++|
T Consensus       171 ~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~  250 (316)
T 3hx3_A          171 TFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTY  250 (316)
T ss_dssp             CHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcccCCcceEEEEEECCCCCHHHhccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHH
Confidence            999999999999999887544 5899999999999999999888999999999999999999999999999999999999


Q ss_pred             HHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy4447         160 FVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKN  219 (261)
Q Consensus       160 ~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~~~~~~~w~~~l~~  219 (261)
                      +++||||+++|++||+|++++ .++|.++||+++||+ +|||++++.+  ++.|.+.+..
T Consensus       251 ~ivkpfl~~kt~~KI~~~~~~-~~~L~~~I~~~~LP~-eyGG~~~~~d--~~~~~~~l~~  306 (316)
T 3hx3_A          251 NVVKPFLKSKLLERVFVHGDD-LSGFYQEIDENILPS-DFGGTLPKYD--GKAVAEQLFG  306 (316)
T ss_dssp             HHHGGGCCHHHHTTEEEEETC-CHHHHHHSCGGGSBG-GGTSSBCCCC--HHHHHHHHC-
T ss_pred             HHHHHhCCHHhhhheEEeCCC-HHHHHhhCCHhhCcH-hhCCCCCCcC--hhHHHHHHcC
Confidence            999999999999999999643 689999999999999 9999998666  6888887754

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=100.00  E-value=3.8e-45  Score=319.18  Aligned_cols=200  Identities=14%  Similarity=0.168  Sum_probs=172.3

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhC--CccccCCCCCcHHHHHHhhhccccccCC-CCCCCCEEEEEecCCCCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNT--PEFFSKRDINRPELLAQSKVVEFGAIAP-KTPQGYQVIFHRLQQFEPS   78 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~--~~~~~~~~~~~~~~~~~l~~g~~~~~l~-~D~~G~~V~~~~~~~~d~~   78 (261)
                      +|+||||||+||+++|.++|++|++||+++  ++++.+.++...   +.+...+.. +++ +|++||||+++++|++|++
T Consensus        54 ~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~---~~~~~~~~~-~~~g~Dk~GrpV~i~~~g~~d~~  129 (296)
T 1aua_A           54 TLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEK---PLIAKFYPQ-YYHKTDKDGRPVYFEELGAVNLH  129 (296)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTH---HHHGGGSCC-EEEEECTTSCEEEEECGGGCCHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcH---HHHHHhCCc-eecccCCCCCEEEEEeeccCChH
Confidence            799999999999999999999999999998  677766554221   222333333 344 9999999999999999875


Q ss_pred             C----CCHHHHHHHHHHHHHHHhcc--------CC-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeee
Q psy4447          79 K----YVFQDSVRLLAMSIDACLHV--------EG-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKG  145 (261)
Q Consensus        79 ~----~~~~~~~r~~~~~~e~~~~~--------~~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~  145 (261)
                      +    .+.+++++++++.+|.++..        .+ +++++++|+|++|+|++|+.++ ++.+|.++.++|++||+|+++
T Consensus       130 ~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s~~~~~~~-~~~~k~~~~~~q~~YPerl~~  208 (296)
T 1aua_A          130 EMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSV-MSYVREASYISQNYYPERMGK  208 (296)
T ss_dssp             HHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHH-HHHHHHHHHHHHHHSTTCEEE
T ss_pred             HhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCCHHHHHHH-HHHHHHHHHHHHHhHHHhhCe
Confidence            4    58899999999999987542        22 4889999999999999998765 788999999999999999999


Q ss_pred             eEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCChH
Q psy4447         146 IHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDSK  207 (261)
Q Consensus       146 i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~~  207 (261)
                      +||||+|++|+++|+++||||+++|++||+|+++++.++|.++||+++||+ +|||+++..+
T Consensus       209 i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP~-~yGG~~~~~~  269 (296)
T 1aua_A          209 FYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPV-KFGGKSEVDE  269 (296)
T ss_dssp             EEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBG-GGTSCBCCCG
T ss_pred             EEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccHHHHHhhCCHhhCcH-HhCCCCCCCC
Confidence            999999999999999999999999999999997666789999999999999 9999996543

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=100.00  E-value=4.7e-44  Score=324.79  Aligned_cols=198  Identities=17%  Similarity=0.245  Sum_probs=174.0

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhC--CccccCCCCCcHHHHHHhhhccccccCCCCCCCCEEEEEecCCCCCC-
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNT--PEFFSKRDINRPELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPS-   78 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~--~~~~~~~~~~~~~~~~~l~~g~~~~~l~~D~~G~~V~~~~~~~~d~~-   78 (261)
                      +|+||||||+||+++|.++|+++++||+++  ++++...  ..+.+++.+..|..    |+|++||||+++++|++|++ 
T Consensus        37 ~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~--~~~~~~~~~~~~~~----g~Dk~GrpV~~~~~g~~d~~~  110 (403)
T 1olm_A           37 FLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQ--PPEVIQQYLSGGMC----GYDLDGCPVWYDIIGPLDAKG  110 (403)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGGSC--CCHHHHHHCCBEEE----EECTTSCEEEEEECTTCCHHH
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCcccccC--CHHHHHHhCCceee----ccCCCcCEEEEEecCCCChHH
Confidence            799999999999999999999999999998  3555522  22456666554433    38999999999999999987 


Q ss_pred             ---CCCHHHHHHHHHHHHHHHhccC-------C-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccceeeeeE
Q psy4447          79 ---KYVFQDSVRLLAMSIDACLHVE-------G-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIH  147 (261)
Q Consensus        79 ---~~~~~~~~r~~~~~~e~~~~~~-------~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i~  147 (261)
                         ..+.++++|++++++|.++++.       + .+.|+++|+|++|+|++|+++..++.+|.++.++|++||+|++++|
T Consensus       111 l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~~i~  190 (403)
T 1olm_A          111 LLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLF  190 (403)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred             hhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhCeEE
Confidence               4799999999999999987642       2 3789999999999999998766678899999999999999999999


Q ss_pred             EEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCCh
Q psy4447         148 ILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDS  206 (261)
Q Consensus       148 iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~  206 (261)
                      |||+|++|+++|+++||||+++|++||+|+++++.++|.++||+++||+ +|||+++..
T Consensus       191 iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~I~~~~LP~-~yGG~~~~~  248 (403)
T 1olm_A          191 VVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPV-EYGGTMTDP  248 (403)
T ss_dssp             EESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSBG-GGTSSBCCT
T ss_pred             EEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHHHHHHhhcChhhCch-hhCCCcCCC
Confidence            9999999999999999999999999999997666689999999999999 999998653

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=100.00  E-value=1.6e-44  Score=317.98  Aligned_cols=202  Identities=16%  Similarity=0.166  Sum_probs=169.3

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCC--ccccCCCCCc----HHHHHHhhhccccccCCCCCCCCEEEEEecCCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTP--EFFSKRDINR----PELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQF   75 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~--~~~~~~~~~~----~~~~~~l~~g~~~~~l~~D~~G~~V~~~~~~~~   75 (261)
                      +|+||||||+|||++|.++|+++++||++++  +++.+.++..    ++...+.+.+..+ +.|+|++||||+++++|++
T Consensus        63 ~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~~~~~~e~~~~~~~~~~~-~~g~Dk~GRpV~i~r~g~~  141 (320)
T 3q8g_A           63 TLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQY-YHHVDKDGRPLYFAELGGI  141 (320)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTHHHHHHHHHHHHTTSCEE-EEEECTTCCEEEEEECTTC
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCccccccccccccccchhHHHHHHHhCCce-ecCCCCCcCEEEEEecccc
Confidence            7999999999999999999999999999986  4544332210    0122233333333 3349999999999999999


Q ss_pred             CCCC----CCHHHHHHHHHHHHHHHhcc--------CC-CcCcEEEEEeCCCCCcccccccCHHHHHHHHHHhhccccce
Q psy4447          76 EPSK----YVFQDSVRLLAMSIDACLHV--------EG-TVPGYIFLFDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVR  142 (261)
Q Consensus        76 d~~~----~~~~~~~r~~~~~~e~~~~~--------~~-~~~g~v~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~r  142 (261)
                      |+++    .+.+++++++++.+|.++..        .+ .++++++|+|++|+|++|+.++ ++.+|.++.++|++||+|
T Consensus       142 d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~sl~~~~~~-~~~~k~~~~~lq~~YPer  220 (320)
T 3q8g_A          142 NLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHV-LSYIKDVADISQNYYPER  220 (320)
T ss_dssp             CHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHT-HHHHHHHHHHHHHHSTTC
T ss_pred             CHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCCCHHHHHHH-HHHHHHHHHHHHhhCchh
Confidence            9875    37889999999999987531        22 2788999999999999998764 788999999999999999


Q ss_pred             eeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCCCh
Q psy4447         143 LKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLPDS  206 (261)
Q Consensus       143 l~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~~~  206 (261)
                      ++++||||+|++|+++|+++||||+++|++||+|+++++.++|.++||+++||+ +|||+++..
T Consensus       221 l~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP~-~yGG~~~~~  283 (320)
T 3q8g_A          221 MGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLPV-KYGGTSVLH  283 (320)
T ss_dssp             EEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHSCGGGSBG-GGTSCBCCS
T ss_pred             hceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhCChhhCCh-hhCCCCCCC
Confidence            999999999999999999999999999999999998666789999999999999 999999643

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=99.32  E-value=1.7e-12  Score=110.05  Aligned_cols=137  Identities=10%  Similarity=0.070  Sum_probs=109.8

Q ss_pred             hhccccccCCCCCCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhccCCCcCcEEEEEeCCCCCcccccccCHHHHH
Q psy4447          50 KVVEFGAIAPKTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGTVPGYIFLFDMAGVRLGHVLRLSVGQLS  129 (261)
Q Consensus        50 ~~g~~~~~l~~D~~G~~V~~~~~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~~~~g~v~I~D~~g~s~~~~~~~~~~~~k  129 (261)
                      +.+.++ .-|.|++|+||+++.+.++++...+.+.++.+++.+++...     -..+.+|+|++|++..+.  .+.+.++
T Consensus         9 ~~~ify-~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~~~~-----~~~y~lV~d~T~~~~~n~--p~~~wl~   80 (256)
T 3pg7_A            9 TLSIFY-QAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYY-----AKPYEIVVDLTHTGPSNR--FKTDFLS   80 (256)
T ss_dssp             HHTSEE-EEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTT-----TSCEEEEEECTTCCGGGC--CCHHHHH
T ss_pred             HcCCEE-EcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHHHhc-----CCCeEEEEECCCCCcccC--CcHHHHH
Confidence            344554 44589999999999999998877777766666655555332     257999999999998754  4667899


Q ss_pred             HHHHHhhccccceeeeeEEEeCchHHHHHHHHh-hhcchHHhhcceeeCCCCChhhhhhhcCCCCCCC
Q psy4447         130 KFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVV-KPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPG  196 (261)
Q Consensus       130 ~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~v-k~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~  196 (261)
                      .+..++...|...++++||+|++++|...+..+ ++|.+.+..+|++++++  .++|.++|+.++|.-
T Consensus        81 ~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~s--l~eL~~~i~~~~L~L  146 (256)
T 3pg7_A           81 KWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDC--PGKLAEHIEHEQQKL  146 (256)
T ss_dssp             HTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESS--TTGGGGTSCGGGCCC
T ss_pred             HHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECC--HHHHHhhcCHHHcCC
Confidence            999999999999999999999999999776654 66666688889999987  899999998887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	261
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	2e-27
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	2e-15
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	6e-12

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 2e-27
 Identities = 29/171 (16%), Positives = 75/171 (43%), Gaps = 3/171 (1%)

Query: 60  KTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEGT-VPGYIFLFDMAGVRLG 118
           + P G +V+ +R+  ++P  +   D  R+  ++ +  +    T   G   +FD+ G +  
Sbjct: 17  RDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFS 76

Query: 119 HVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHP 178
           H  +++     K    L +  P++++GIH++N   +   +  ++KPF+ + +   +H H 
Sbjct: 77  HAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHG 136

Query: 179 EGDISSVYEFVPPKCIPGGDLKGDLPDSKTLHNEYVEWMKNLVEFFLQDEK 229
             +         P  +P  +  G+    + +  E+  ++    ++     +
Sbjct: 137 -NNYKQSLLQHFPDILP-LEYGGEEFSMEDICQEWTNFIMKSEDYLSSISE 185

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 2e-15
 Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 15/160 (9%)

Query: 63  QGYQVIFHRLQQFEPSK------------YVFQDSVRLLAMSIDACLHVEGTVPGYIFLF 110
            G  V +  +   +                  ++   LL         +   V     ++
Sbjct: 19  DGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIY 78

Query: 111 DMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDL 170
           D  G+ L H+ + +V    +F    +E  P  LK + ++    L      ++KPF+ +D 
Sbjct: 79  DCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDT 138

Query: 171 LSLVHFHPEGDISSVYEFVPPKCIP---GGDLKGDLPDSK 207
              +          + + + P  +P   GG +     + K
Sbjct: 139 RKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPK 178

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.9 bits (147), Expect = 6e-12
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 17/170 (10%)

Query: 63  QGYQVIFHRLQQFEPS------------KYVFQDSVRLLAMSIDACLHVEGT-VPGYIFL 109
            G  V F  L                  K +  +   ++   + AC    G  V     +
Sbjct: 21  DGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTI 80

Query: 110 FDMAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKD 169
            D+ G+ +     + +  + +     Q   P R+   +I+N          + KPF+   
Sbjct: 81  MDLKGISISSAYSV-MSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPV 139

Query: 170 LLSLVHFHPEGDISSVYEFVPPKCIP---GGDLKGDLPDSKTLHNEYVEW 216
            +S +          + + +P + +P   GG  + D        ++   W
Sbjct: 140 TVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKGGLYLSDIGPW 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	261
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	100.0
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	100.0
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	100.0
d1r5la1	66	Alpha-tocopherol transfer protein {Human (Homo sap	99.25
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	98.83
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	98.67

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-44  Score=290.65  Aligned_cols=181  Identities=17%  Similarity=0.388  Sum_probs=170.0

Q ss_pred             HHHHhhhccccccCC-CCCCCCEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhccCC-CcCcEEEEEeCCCCCcccccc
Q psy4447          45 LLAQSKVVEFGAIAP-KTPQGYQVIFHRLQQFEPSKYVFQDSVRLLAMSIDACLHVEG-TVPGYIFLFDMAGVRLGHVLR  122 (261)
Q Consensus        45 ~~~~l~~g~~~~~l~-~D~~G~~V~~~~~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~-~~~g~v~I~D~~g~s~~~~~~  122 (261)
                      +.+.++.|+++ ++| +|++||||++++++++||+.++..+++|+.++++|.++.+++ +++|+++|+|++|+|++|+.+
T Consensus         2 i~~~l~~g~~~-~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~~~~~g~~~I~D~~g~s~~~~~~   80 (185)
T d1r5la2           2 IIGLLKAGYHG-VLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQ   80 (185)
T ss_dssp             THHHHHTTCEE-ECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHH
T ss_pred             hHHHHHcCCce-ecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHhccccCCceEEEEEECCCCCHHHhhh
Confidence            45788999999 999 999999999999999999999999999999999999887655 488999999999999999999


Q ss_pred             cCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCC
Q psy4447         123 LSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGD  202 (261)
Q Consensus       123 ~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~  202 (261)
                      .+++.++++++++|++||+|++++||||+|++|+++|+++||||+++|++||++|+++ .+++.+++++++||+ +|||+
T Consensus        81 ~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~-~~~~~~~~~~~~LP~-~~GG~  158 (185)
T d1r5la2          81 ITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN-YKQSLLQHFPDILPL-EYGGE  158 (185)
T ss_dssp             CCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS-CHHHHHHHSTTTSCG-GGTCS
T ss_pred             ccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccc-hHHHHhhcCHHhCCH-hcCCC
Confidence            9999999999999999999999999999999999999999999999999999999643 577888888999999 99999


Q ss_pred             CCChHHHHHHHHHHHHHhHHHHHhhc
Q psy4447         203 LPDSKTLHNEYVEWMKNLVEFFLQDE  228 (261)
Q Consensus       203 ~~~~~~~~~~w~~~l~~~~~~~~~~~  228 (261)
                      ++++++++++|.+++.++++||.+.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~d~~~~~~  184 (185)
T d1r5la2         159 EFSMEDICQEWTNFIMKSEDYLSSIS  184 (185)
T ss_dssp             SCCHHHHHHHHHHHHHHTHHHHHHTC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999864

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-35  Score=243.30  Aligned_cols=157  Identities=17%  Similarity=0.272  Sum_probs=139.0

Q ss_pred             HHHHHhhhccccccCCCCCCCCEEEEEecCCCCCC----CCCHHHHHHHHHHHHHHHhcc--------CCCcCcEEEEEe
Q psy4447          44 ELLAQSKVVEFGAIAPKTPQGYQVIFHRLQQFEPS----KYVFQDSVRLLAMSIDACLHV--------EGTVPGYIFLFD  111 (261)
Q Consensus        44 ~~~~~l~~g~~~~~l~~D~~G~~V~~~~~~~~d~~----~~~~~~~~r~~~~~~e~~~~~--------~~~~~g~v~I~D  111 (261)
                      -+++.+..|+++    +|++||||+++++|++|++    ..+.++++++.++.+|.+++.        ..+++|+++|+|
T Consensus         4 ~i~~~~p~~~~G----~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~D   79 (199)
T d1olma3           4 VIQQYLSGGMCG----YDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYD   79 (199)
T ss_dssp             HHHHHCCBEEEE----ECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEE
T ss_pred             HHHHHCCCcccc----CCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEE
Confidence            355555555444    8999999999999999975    458899999999999987642        124789999999


Q ss_pred             CCCCCcccccccCHHHHHHHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCC
Q psy4447         112 MAGVRLGHVLRLSVGQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPP  191 (261)
Q Consensus       112 ~~g~s~~~~~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~  191 (261)
                      ++|+|++|+++..++.+++++.++|++||+|++++||||+|++|+++|+++||||+++|++||+|+++++.++|.++|++
T Consensus        80 l~g~s~~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~~~~~~L~~~i~~  159 (199)
T d1olma3          80 CEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISP  159 (199)
T ss_dssp             CTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCG
T ss_pred             CCCCchhhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCCCCHHHHHHhCCH
Confidence            99999999988778899999999999999999999999999999999999999999999999999976557899999999


Q ss_pred             CCCCCCCCCCCCCC
Q psy4447         192 KCIPGGDLKGDLPD  205 (261)
Q Consensus       192 ~~LP~~~yGG~~~~  205 (261)
                      ++||+ +|||+++.
T Consensus       160 ~~lP~-~yGGt~~~  172 (199)
T d1olma3         160 DQVPV-EYGGTMTD  172 (199)
T ss_dssp             GGSBG-GGTSSBCC
T ss_pred             hhCCH-HhCCCCCC
Confidence            99999 99999864

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-33  Score=228.21  Aligned_cols=144  Identities=14%  Similarity=0.194  Sum_probs=129.6

Q ss_pred             CCCCCCCEEEEEecCCCCCC----CCCHHHHHHHHHHHHHHHhcc---------CCCcCcEEEEEeCCCCCcccccccCH
Q psy4447          59 PKTPQGYQVIFHRLQQFEPS----KYVFQDSVRLLAMSIDACLHV---------EGTVPGYIFLFDMAGVRLGHVLRLSV  125 (261)
Q Consensus        59 ~~D~~G~~V~~~~~~~~d~~----~~~~~~~~r~~~~~~e~~~~~---------~~~~~g~v~I~D~~g~s~~~~~~~~~  125 (261)
                      |+|++||||+++++|++|++    ..+.+++++++++.+|.+++.         ...++++++|+|++|+|++++.+. .
T Consensus        17 G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s~~~~~~~-~   95 (203)
T d1auaa2          17 KTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSV-M   95 (203)
T ss_dssp             EECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHH-H
T ss_pred             CCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCCChHHhhhH-H
Confidence            39999999999999999875    358899999999999987531         123789999999999999998643 4


Q ss_pred             HHHHHHHHHhhccccceeeeeEEEeCchHHHHHHHHhhhcchHHhhcceeeCCCCChhhhhhhcCCCCCCCCCCCCCCC
Q psy4447         126 GQLSKFFLYLQEGLPVRLKGIHILNTRPLIDKIMFVVKPFMKKDLLSLVHFHPEGDISSVYEFVPPKCIPGGDLKGDLP  204 (261)
Q Consensus       126 ~~~k~~~~~~q~~yP~rl~~i~iiN~P~~f~~~~~~vk~fl~~~~~~ki~~~~~~~~~~L~~~i~~~~LP~~~yGG~~~  204 (261)
                      ..++.++.++|++||++++++||||+|++|+++|+++|+||+++|++||+++++++.++|.++|++++||+ +|||++.
T Consensus        96 ~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP~-~~GG~~~  173 (203)
T d1auaa2          96 SYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPV-KFGGKSE  173 (203)
T ss_dssp             HHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBG-GGTSCBC
T ss_pred             HHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhChH-HhCCCCc
Confidence            67899999999999999999999999999999999999999999999999997666899999999999999 9999985

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=9.8e-13  Score=86.27  Aligned_cols=40  Identities=20%  Similarity=0.294  Sum_probs=37.8

Q ss_pred             CHHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy4447           1 ETLILIHHSCYFDLEASKSCIEVYFTTRTNTPEFFSKRDI   40 (261)
Q Consensus         1 ~~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~~~~~~~~~   40 (261)
                      ++|+||||||+||+++|.++|++|++||+++|++|.+.+|
T Consensus        26 ~~LlrFLRarkf~~~ka~~~l~~y~~~R~~~peif~~l~P   65 (66)
T d1r5la1          26 SFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP   65 (66)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCHHHHSCCCG
T ss_pred             HHHHHHHHHccCCHHHHHHHHHHHHHHHHHCHHHccCCCC
Confidence            4899999999999999999999999999999999998765

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.4e-09  Score=73.01  Aligned_cols=31  Identities=19%  Similarity=0.205  Sum_probs=29.7

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTP   32 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~   32 (261)
                      +|+||||||+|||++|.+++.+|++||+++.
T Consensus        37 ~LlRFLrAr~fdv~kA~~ml~~~l~WR~~~~   67 (75)
T d1olma1          37 FLLRWLRARSFDLQKSEAMLRKHVEFRKQKD   67 (75)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHcC
Confidence            7999999999999999999999999999984

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=5.8e-09  Score=72.62  Aligned_cols=31  Identities=23%  Similarity=0.209  Sum_probs=29.6

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHhhCC
Q psy4447           2 TLILIHHSCYFDLEASKSCIEVYFTTRTNTP   32 (261)
Q Consensus         2 ~L~rFLra~~~dv~~A~~~l~~~~~~R~~~~   32 (261)
                      +|+||||||+||+++|.+||.+|++||+++.
T Consensus        54 ~llRfLrAr~fd~~~a~~ml~~~l~wR~~~~   84 (93)
T d1auaa1          54 TLLRFLRARKFDVQLAKEMFENCEKWRKDYG   84 (93)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHccCCHHHHHHHHHHHHHHHHHhC
Confidence            7999999999999999999999999999973