Psyllid ID: psy4571
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 437 | 2.2.26 [Sep-21-2011] | |||||||
| Q24572 | 430 | Probable histone-binding | yes | N/A | 0.263 | 0.267 | 0.964 | 4e-95 | |
| Q7ZTY4 | 426 | Histone-binding protein R | yes | N/A | 0.260 | 0.267 | 0.952 | 2e-93 | |
| O93377 | 425 | Histone-binding protein R | N/A | N/A | 0.240 | 0.247 | 0.952 | 3e-93 | |
| Q5M7K4 | 425 | Histone-binding protein R | yes | N/A | 0.249 | 0.256 | 0.952 | 3e-93 | |
| Q9W7I5 | 425 | Histone-binding protein R | yes | N/A | 0.295 | 0.303 | 0.952 | 3e-93 | |
| Q6INH0 | 425 | Histone-binding protein R | N/A | N/A | 0.249 | 0.256 | 0.952 | 4e-93 | |
| Q60972 | 425 | Histone-binding protein R | yes | N/A | 0.295 | 0.303 | 0.952 | 4e-93 | |
| Q09028 | 425 | Histone-binding protein R | yes | N/A | 0.295 | 0.303 | 0.952 | 4e-93 | |
| Q6P3H7 | 424 | Histone-binding protein R | no | N/A | 0.308 | 0.318 | 0.952 | 4e-93 | |
| Q3MHL3 | 425 | Histone-binding protein R | yes | N/A | 0.295 | 0.303 | 0.952 | 4e-93 |
| >sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 348 bits (893), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 294
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 295 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the nucleosome remodeling and deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the nucleosome remodeling factor (NURF) complex, which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin; and the polycomb group (PcG) repressor complex ESC-E(Z), which promotes repression of homeotic genes during development. Also required for transcriptional repression of E2F target genes by E2f2 and Rbf or Rbf2. Drosophila melanogaster (taxid: 7227) |
| >sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Danio rerio (taxid: 7955) |
| >sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus laevis (taxid: 8355) |
| >sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus tropicalis (taxid: 8364) |
| >sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Gallus gallus (taxid: 9031) |
| >sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus laevis (taxid: 8355) |
| >sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; and the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Mus musculus (taxid: 10090) |
| >sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Homo sapiens (taxid: 9606) |
| >sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 167/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Danio rerio (taxid: 7955) |
| >sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; and the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Bos taurus (taxid: 9913) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 437 | ||||||
| 17933648 | 430 | chromatin assembly factor 1 subunit, iso | 0.263 | 0.267 | 0.964 | 3e-93 | |
| 321465178 | 427 | hypothetical protein DAPPUDRAFT_306287 [ | 0.286 | 0.292 | 0.970 | 3e-93 | |
| 281361801 | 429 | chromatin assembly factor 1 subunit, iso | 0.263 | 0.268 | 0.964 | 3e-93 | |
| 332022144 | 478 | Putative histone-binding protein Caf1 [A | 0.302 | 0.276 | 0.964 | 4e-93 | |
| 188036234 | 432 | Chain A, Structural Basis Of Histone H4 | 0.263 | 0.266 | 0.964 | 4e-93 | |
| 332639529 | 422 | Chain A, Crystal Structure Of Nurf55 In | 0.263 | 0.272 | 0.964 | 4e-93 | |
| 307206335 | 428 | Probable histone-binding protein Caf1 [H | 0.302 | 0.308 | 0.970 | 5e-93 | |
| 346465887 | 434 | hypothetical protein [Amblyomma maculatu | 0.308 | 0.311 | 0.964 | 5e-93 | |
| 344244001 | 527 | Histone-binding protein RBBP4 [Cricetulu | 0.350 | 0.290 | 0.952 | 6e-93 | |
| 240978519 | 424 | retinoblastoma-binding protein, putative | 0.306 | 0.316 | 0.964 | 8e-93 |
| >gi|17933648|ref|NP_524354.1| chromatin assembly factor 1 subunit, isoform A [Drosophila melanogaster] gi|195328823|ref|XP_002031111.1| GM24205 [Drosophila sechellia] gi|195570742|ref|XP_002103363.1| GD18995 [Drosophila simulans] gi|3121830|sp|Q24572.1|CAF1_DROME RecName: Full=Probable histone-binding protein Caf1; AltName: Full=Chromatin assembly factor 1 p55 subunit; Short=CAF-1 p55 subunit; AltName: Full=Nucleosome-remodeling factor 55 kDa subunit; Short=NURF-55; AltName: Full=dCAF-1 gi|332138101|pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide gi|1407828|gb|AAB37257.1| chromatin assembly factor 1 p55 subunit [Drosophila melanogaster] gi|7299974|gb|AAF55146.1| chromatin assembly factor 1 subunit, isoform A [Drosophila melanogaster] gi|16769474|gb|AAL28956.1| LD33761p [Drosophila melanogaster] gi|116805904|emb|CAL26322.1| CG4236 [Drosophila melanogaster] gi|116805906|emb|CAL26323.1| CG4236 [Drosophila melanogaster] gi|116805908|emb|CAL26324.1| CG4236 [Drosophila melanogaster] gi|116805910|emb|CAL26325.1| CG4236 [Drosophila melanogaster] gi|116805912|emb|CAL26330.1| CG4236 [Drosophila melanogaster] gi|116805914|emb|CAL26335.1| CG4236 [Drosophila melanogaster] gi|116805916|emb|CAL26337.1| CG4236 [Drosophila melanogaster] gi|116805918|emb|CAL26338.1| CG4236 [Drosophila melanogaster] gi|116805920|emb|CAL26339.1| CG4236 [Drosophila melanogaster] gi|116805922|emb|CAL26340.1| CG4236 [Drosophila melanogaster] gi|116805924|emb|CAL26341.1| CG4236 [Drosophila melanogaster] gi|116805926|emb|CAL26342.1| CG4236 [Drosophila melanogaster] gi|194120054|gb|EDW42097.1| GM24205 [Drosophila sechellia] gi|194199290|gb|EDX12866.1| GD18995 [Drosophila simulans] gi|220946090|gb|ACL85588.1| Caf1-PA [synthetic construct] gi|220955822|gb|ACL90454.1| Caf1-PA [synthetic construct] gi|223967323|emb|CAR93392.1| CG4236-PA [Drosophila melanogaster] gi|223967325|emb|CAR93393.1| CG4236-PA [Drosophila melanogaster] gi|223967327|emb|CAR93394.1| CG4236-PA [Drosophila melanogaster] gi|223967329|emb|CAR93395.1| CG4236-PA [Drosophila melanogaster] gi|223967331|emb|CAR93396.1| CG4236-PA [Drosophila melanogaster] gi|223967333|emb|CAR93397.1| CG4236-PA [Drosophila melanogaster] gi|223967335|emb|CAR93398.1| CG4236-PA [Drosophila melanogaster] gi|223967337|emb|CAR93399.1| CG4236-PA [Drosophila melanogaster] gi|223967339|emb|CAR93400.1| CG4236-PA [Drosophila melanogaster] gi|223967341|emb|CAR93401.1| CG4236-PA [Drosophila melanogaster] gi|223967343|emb|CAR93402.1| CG4236-PA [Drosophila melanogaster] gi|223967345|emb|CAR93403.1| CG4236-PA [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 294
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 295 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321465178|gb|EFX76181.1| hypothetical protein DAPPUDRAFT_306287 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/170 (97%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+N S+PSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 232 EDVAWHLLHESLFGSVADDQKLMIWDTRSNNTSRPSHTVDAHTAEVNCLSFNPYSEFILA 291
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 292 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 351
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 352 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 401
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|281361801|ref|NP_001163617.1| chromatin assembly factor 1 subunit, isoform B [Drosophila melanogaster] gi|272476987|gb|ACZ94913.1| chromatin assembly factor 1 subunit, isoform B [Drosophila melanogaster] gi|327180772|gb|AEA30995.1| SD22845p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 234 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 293
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 294 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 353
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 354 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 403
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332022144|gb|EGI62466.1| Putative histone-binding protein Caf1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR +N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 284 EDVAWHLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 343
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 344 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 403
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS+EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 404 GEEQSSEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 453
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|188036234|pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 gi|188036235|pdb|3C9C|A Chain A, Structural Basis Of Histone H4 Recognition By P55 | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 237 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 296
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 297 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 356
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 357 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 406
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332639529|pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 gi|332639530|pdb|2YBA|B Chain B, Crystal Structure Of Nurf55 In Complex With Histone H3 gi|333361052|pdb|2YB8|B Chain B, Crystal Structure Of Nurf55 In Complex With Su(Z)12 | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 239 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 298
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 299 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 358
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 359 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 408
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307206335|gb|EFN84392.1| Probable histone-binding protein Caf1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 165/170 (97%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR +N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 233 EDVAWHLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 292
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 293 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 352
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 353 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 402
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|346465887|gb|AEO32788.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+N +KPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 239 EDVAWHLLHESLFGSVADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILA 298
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 299 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 358
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 359 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 408
|
Source: Amblyomma maculatum Species: Amblyomma maculatum Genus: Amblyomma Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|344244001|gb|EGW00105.1| Histone-binding protein RBBP4 [Cricetulus griseus] | Back alignment and taxonomy information |
|---|
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 344 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 403
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 404 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 463
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 464 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 513
|
Source: Cricetulus griseus Species: Cricetulus griseus Genus: Cricetulus Family: Cricetidae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|240978519|ref|XP_002402966.1| retinoblastoma-binding protein, putative [Ixodes scapularis] gi|215491256|gb|EEC00897.1| retinoblastoma-binding protein, putative [Ixodes scapularis] | Back alignment and taxonomy information |
|---|
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/170 (96%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+N +KPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILA 288
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 348
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 349 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
|
Source: Ixodes scapularis Species: Ixodes scapularis Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 437 | ||||||
| FB|FBgn0263979 | 430 | Caf1 "Chromatin assembly facto | 0.389 | 0.395 | 0.964 | 3.5e-105 | |
| ZFIN|ZDB-GENE-030131-848 | 426 | rbb4l "retinoblastoma binding | 0.389 | 0.399 | 0.952 | 9.5e-103 | |
| UNIPROTKB|Q9W7I5 | 425 | RBBP4 "Histone-binding protein | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| UNIPROTKB|F2Z4M0 | 425 | RBBP4 "Histone-binding protein | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| UNIPROTKB|Q3MHL3 | 425 | RBBP4 "Histone-binding protein | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| UNIPROTKB|E2QXR8 | 425 | RBBP4 "Uncharacterized protein | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| UNIPROTKB|Q09028 | 425 | RBBP4 "Histone-binding protein | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| MGI|MGI:1194912 | 425 | Rbbp4 "retinoblastoma binding | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| RGD|1593768 | 425 | Rbbp4 "retinoblastoma binding | 0.389 | 0.4 | 0.952 | 1.2e-102 | |
| UNIPROTKB|Q5M7K4 | 425 | rbbp4 "Histone-binding protein | 0.389 | 0.4 | 0.952 | 1.2e-102 |
| FB|FBgn0263979 Caf1 "Chromatin assembly factor 1 subunit" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 900 (321.9 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 294
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 295 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
|
|
| ZFIN|ZDB-GENE-030131-848 rbb4l "retinoblastoma binding protein 4, like" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 885 (316.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|Q9W7I5 RBBP4 "Histone-binding protein RBBP4" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|F2Z4M0 RBBP4 "Histone-binding protein RBBP4" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|Q3MHL3 RBBP4 "Histone-binding protein RBBP4" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|E2QXR8 RBBP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|Q09028 RBBP4 "Histone-binding protein RBBP4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| MGI|MGI:1194912 Rbbp4 "retinoblastoma binding protein 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| RGD|1593768 Rbbp4 "retinoblastoma binding protein 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
| UNIPROTKB|Q5M7K4 rbbp4 "Histone-binding protein RBBP4" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P90916 | LIN53_CAEEL | No assigned EC number | 0.8352 | 0.3821 | 0.4004 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 437 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-19 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-19 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-18 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-14 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-13 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-09 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 1e-08 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 3e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 4e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 7e-07 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 8e-06 | |
| pfam12265 | 73 | pfam12265, CAF1C_H4-bd, Histone-binding protein RB | 3e-05 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 4e-05 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 5e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 7e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 2e-04 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 4e-04 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 0.004 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 2e-19
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
VA+ + S + D + +WD R+ K T+ HT EVN ++F+P L +
Sbjct: 140 SVAFSPDGTFVASS-SQDGTIKLWDLRT---GKCVATLTGHTGEVNSVAFSP-DGEKLLS 194
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S+D T+ LWDL K L + H++ + V +SP +LAS D + VWDL
Sbjct: 195 SSSDGTIKLWDLSTGKC-LGTLRGHENGVNSVAFSPDGY-LLASGSEDGTIRVWDLRT-- 250
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
E + GHT ++ +W+P+ + S S D +
Sbjct: 251 ------------GECVQTLSGHTNSVTSLAWSPDGKRL-ASGSADGTI 285
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 4e-19
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVA L S + D+ + +WD + + T+ HT+ V+ ++F+P IL+
Sbjct: 55 RDVAASADGTYLA-SGSSDKTIRLWDLET---GECVRTLTGHTSYVSSVAFSP-DGRILS 109
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+ S DKT+ +WD+ K + H D + V +SP T +ASS D + +WDL
Sbjct: 110 SSSRDKTIKVWDVETGKCL-TTLRGHTDWVNSVAFSPDG-TFVASSSQDGTIKLWDLRTG 167
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
+ GHT +++ +++P+ ++ S S+ I
Sbjct: 168 KCVAT--------------LTGHTGEVNSVAFSPDGEKLLSSSSDGTIK 202
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 4e-18
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200
T+ HT V C++F+P + LATGS D T+ +WDL +L L + + H + V
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKL-LATGSGDGTIKVWDLETGEL-LRTLKGHTGPVRDVA 58
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
S LAS +D+ + +WDL E + GHT+ +S +++P
Sbjct: 59 ASADGTY-LASGSSDKTIRLWDLET--------------GECVRTLTGHTSYVSSVAFSP 103
Query: 261 NEPWVICSVSEDN 273
+ + S S D
Sbjct: 104 DGRILSSS-SRDK 115
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VA+ E L S + D + +WD + K T+ H VN ++F+P Y+LA+G
Sbjct: 183 VAFSPDGEKLLSS-SSDGTIKLWDLST---GKCLGTLRGHENGVNSVAFSP-DGYLLASG 237
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
S D T+ +WDLR + + + H + + + WSP + LAS D + +WD
Sbjct: 238 SEDGTIRVWDLRTGEC-VQTLSGHTNSVTSLAWSP-DGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 72.4 bits (176), Expect = 1e-13
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+A+ L S + D + +WD + + + T+ H+ V SF+P LA+
Sbjct: 203 SLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS--TLSGHSDSV-VSSFSPDGSL-LAS 258
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
GS+D T+ LWDLR+ L + H + V +SP + +LAS +D + +WDL
Sbjct: 259 GSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP-DGKLLASGSSDGTVRLWDLET-- 315
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK 287
G GH +S S++P+ ++ S+D ++ + +
Sbjct: 316 ----------GKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLW--DLRTGKP 363
Query: 288 TMRLDSIRSNGGISSTASPTASSTASESPT 317
L+ + +S + S+ S T
Sbjct: 364 LKTLEGHSNVLSVSFSPDGRVVSSGSTDGT 393
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 65.1 bits (157), Expect = 2e-11
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALWD 178
S + D + +WD + S H + V+ L+ + + +LA+ S D TV LWD
Sbjct: 82 SGSSDGTIKLWDLDNGEKLIKSLEGL-HDSSVSKLALSSPDGNSILLASSSLDGTVKLWD 140
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
L + + E H + + + +SP + + + S D + +WDL
Sbjct: 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT------------- 187
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
+ L GHT +S +++P+ +I S S D ++ +
Sbjct: 188 -GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW 226
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 58.9 bits (141), Expect = 2e-09
Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 23/272 (8%)
Query: 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191
D+ S + H + ++F+P E L +GS+D T+ LWDL N + + S E
Sbjct: 48 DSLVSLPDLSSLLLRGHEDSITSIAFSPDGEL-LLSGSSDGTIKLWDLDNGEKLIKSLEG 106
Query: 192 -HKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248
H + ++ S N +LASS D + +WDLS G+ T + G
Sbjct: 107 LHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLE-------------G 153
Query: 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA 308
H+ ++ +++P+ + S D ++ + T T+ + + S
Sbjct: 154 HSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLL 213
Query: 309 SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSI 368
++ S ++ + G +L L + + S S +D +
Sbjct: 214 IASGSSD----GTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGT--IRL 267
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLI 400
W + H+ P L+
Sbjct: 268 WDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL 299
|
Length = 466 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 141 PSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRN-------LKLKLHSFESH 192
P + HT+ + L FNP +SE ILA+GS D T+ +W++ + +K + H
Sbjct: 66 PVIKLKGHTSSILDLQFNPCFSE-ILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124
Query: 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K +I + W+P N I+ SSG D +++WD+
Sbjct: 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDI 155
|
Length = 568 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-07
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
W+++ E + Y+ F +L +++ ++G A+ S LP T L KIW
Sbjct: 1 PWAISPEDKAKYEQIFRSLDKNQD------GTVTGAQAKPILLKSGLPQTLLAKIW 50
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.0 bits (123), Expect = 4e-07
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 9/175 (5%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
L S + D + +WD + + S T+ H V+ LSF+P +++ GS D T+
Sbjct: 296 GKLLASGSSDGTVRLWDLETGKLLS-SLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIR 354
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWDLR K + V +SP + +++S TD + +WDLS ++ +
Sbjct: 355 LWDLRTGKPLK--TLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGH 411
Query: 236 EDGPPELLFIHGGH-----TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
L F G ++ + W+ S S D + S S
Sbjct: 412 TSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLASKSSDLSV 466
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-07
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
K T+ HT V ++F+P LA+GS D TV +WD
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNL-LASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-07
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
+ T+ HT V ++F+P +Y LA+GS D T+ LWD
Sbjct: 3 ELLKTLKGHTGPVTSVAFSPDGKY-LASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 8e-06
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+L S +DD + +W S N T+ A + C+ F S LA GSAD V
Sbjct: 589 TLLASGSDDGSVKLW---SINQGVSIGTIKT-KANICCVQFPSESGRSLAFGSADHKVYY 644
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+DLRN KL L + H + V++ + + L SS TD L +WDLS
Sbjct: 645 YDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLVSSSTDNTLKLWDLS 690
|
Length = 793 |
| >gnl|CDD|221499 pfam12265, CAF1C_H4-bd, Histone-binding protein RBBP4 or subunit C of CAF1 complex | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 3e-05
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 56 NEEYKIWKKNTPFLYDLVVNN 76
NEEY++WKKN PFLYD++ +
Sbjct: 1 NEEYELWKKNDPFLYDMLHTH 21
|
The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six. Length = 73 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 4e-05
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 379 YKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
Y F +L LISG AR F S LP + L +IW
Sbjct: 1 YDQIFRSLDPDGD------GLISGDEARPFLGKSGLPRSVLAQIW 39
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
+KLK H I +Q++P ILAS D + VW++ ++S ++ +D
Sbjct: 68 IKLK-----GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPH--NDESVKEIKDP--- 117
Query: 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
I GH KIS WNP +++CS D+
Sbjct: 118 -QCILKGHKKKISIIDWNPMNYYIMCSSGFDS 148
|
Length = 568 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-05
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
L + + H + V +SP LAS D + +WD
Sbjct: 5 LKTLKGHTGPVTSVAFSPDG-KYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 7e-05
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
L + + H + V +SP + +LAS D + VWD
Sbjct: 3 LLRTLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTR----SHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
DVA++ + ++D +M W + N+S P + HT +V +SF+P +
Sbjct: 80 DVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMN 139
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+LA+ AD V +WD+ K + H D+I ++W+ ++L ++ D++L++ D
Sbjct: 140 VLASAGADMVVNVWDVERGKAV-EVIKCHSDQITSLEWNLDG-SLLCTTSKDKKLNIID 196
|
Length = 493 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHN------VSKPSHTVDAHTAEVNCLSFNPYS 161
D+ ++ + S ++D + +W+ HN + P + H +++ + +NP +
Sbjct: 79 DLQFNPCFSEILASGSEDLTIRVWEIP-HNDESVKEIKDPQCILKGHKKKISIIDWNPMN 137
Query: 162 EYILATGSADKTVALWDLRNLK 183
YI+ + D V +WD+ N K
Sbjct: 138 YYIMCSSGFDSFVNIWDIENEK 159
|
Length = 568 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 155 LSFNPYSEYILATGSADKTVALWDL------RNLKLKLHSFESHKDEIFQVQWSPHNETI 208
++FNP+ L T S D T+ W + +N+ + + H ++ V + P +
Sbjct: 81 VAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNV 140
Query: 209 LASSGTDRRLHVWDLSK 225
LAS+G D ++VWD+ +
Sbjct: 141 LASAGADMVVNVWDVER 157
|
Length = 493 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 437 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0264|consensus | 422 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.98 | |
| KOG0319|consensus | 775 | 99.98 | ||
| KOG0284|consensus | 464 | 99.98 | ||
| KOG0318|consensus | 603 | 99.98 | ||
| KOG0276|consensus | 794 | 99.98 | ||
| KOG0295|consensus | 406 | 99.97 | ||
| KOG0281|consensus | 499 | 99.97 | ||
| KOG0277|consensus | 311 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.97 | |
| KOG0292|consensus | 1202 | 99.97 | ||
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG1446|consensus | 311 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0282|consensus | 503 | 99.96 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0281|consensus | 499 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG0306|consensus | 888 | 99.96 | ||
| KOG0645|consensus | 312 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG0276|consensus | 794 | 99.96 | ||
| KOG0265|consensus | 338 | 99.95 | ||
| KOG0305|consensus | 484 | 99.95 | ||
| KOG0306|consensus | 888 | 99.95 | ||
| KOG1408|consensus | 1080 | 99.95 | ||
| KOG0282|consensus | 503 | 99.95 | ||
| KOG0278|consensus | 334 | 99.95 | ||
| KOG0640|consensus | 430 | 99.95 | ||
| KOG0283|consensus | 712 | 99.95 | ||
| KOG0643|consensus | 327 | 99.95 | ||
| KOG0283|consensus | 712 | 99.95 | ||
| KOG0293|consensus | 519 | 99.95 | ||
| KOG1332|consensus | 299 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| KOG0310|consensus | 487 | 99.94 | ||
| KOG0973|consensus | 942 | 99.94 | ||
| KOG0647|consensus | 347 | 99.94 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.94 | |
| KOG0269|consensus | 839 | 99.94 | ||
| KOG1407|consensus | 313 | 99.94 | ||
| KOG0288|consensus | 459 | 99.94 | ||
| KOG0640|consensus | 430 | 99.94 | ||
| KOG0289|consensus | 506 | 99.94 | ||
| KOG0274|consensus | 537 | 99.94 | ||
| KOG0299|consensus | 479 | 99.94 | ||
| KOG0308|consensus | 735 | 99.94 | ||
| KOG0296|consensus | 399 | 99.93 | ||
| KOG4283|consensus | 397 | 99.93 | ||
| KOG0772|consensus | 641 | 99.93 | ||
| KOG1036|consensus | 323 | 99.93 | ||
| KOG0305|consensus | 484 | 99.93 | ||
| KOG0269|consensus | 839 | 99.93 | ||
| KOG0641|consensus | 350 | 99.93 | ||
| KOG1407|consensus | 313 | 99.93 | ||
| KOG0293|consensus | 519 | 99.93 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.93 | |
| KOG0641|consensus | 350 | 99.93 | ||
| KOG2096|consensus | 420 | 99.92 | ||
| KOG0313|consensus | 423 | 99.92 | ||
| KOG0647|consensus | 347 | 99.92 | ||
| KOG0302|consensus | 440 | 99.92 | ||
| KOG0300|consensus | 481 | 99.92 | ||
| KOG0278|consensus | 334 | 99.92 | ||
| KOG0301|consensus | 745 | 99.92 | ||
| KOG0267|consensus | 825 | 99.91 | ||
| KOG0308|consensus | 735 | 99.91 | ||
| KOG0270|consensus | 463 | 99.91 | ||
| KOG0643|consensus | 327 | 99.91 | ||
| KOG1274|consensus | 933 | 99.91 | ||
| KOG0275|consensus | 508 | 99.91 | ||
| KOG1036|consensus | 323 | 99.91 | ||
| KOG0302|consensus | 440 | 99.9 | ||
| KOG1408|consensus | 1080 | 99.9 | ||
| KOG0639|consensus | 705 | 99.9 | ||
| KOG0267|consensus | 825 | 99.9 | ||
| KOG0973|consensus | 942 | 99.9 | ||
| KOG0646|consensus | 476 | 99.9 | ||
| KOG2445|consensus | 361 | 99.9 | ||
| KOG4328|consensus | 498 | 99.9 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.9 | |
| KOG4283|consensus | 397 | 99.9 | ||
| KOG0268|consensus | 433 | 99.9 | ||
| KOG0289|consensus | 506 | 99.89 | ||
| KOG1446|consensus | 311 | 99.89 | ||
| KOG0299|consensus | 479 | 99.89 | ||
| KOG0294|consensus | 362 | 99.89 | ||
| KOG2106|consensus | 626 | 99.88 | ||
| KOG4378|consensus | 673 | 99.88 | ||
| KOG1539|consensus | 910 | 99.88 | ||
| KOG2048|consensus | 691 | 99.88 | ||
| KOG0639|consensus | 705 | 99.88 | ||
| KOG0301|consensus | 745 | 99.88 | ||
| KOG2055|consensus | 514 | 99.88 | ||
| KOG1332|consensus | 299 | 99.88 | ||
| KOG0270|consensus | 463 | 99.87 | ||
| KOG1273|consensus | 405 | 99.87 | ||
| KOG0307|consensus | 1049 | 99.87 | ||
| KOG1007|consensus | 370 | 99.86 | ||
| KOG0646|consensus | 476 | 99.86 | ||
| KOG0321|consensus | 720 | 99.86 | ||
| KOG0300|consensus | 481 | 99.86 | ||
| KOG0288|consensus | 459 | 99.86 | ||
| KOG0294|consensus | 362 | 99.86 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.86 | |
| KOG1539|consensus | 910 | 99.86 | ||
| KOG1063|consensus | 764 | 99.85 | ||
| KOG1063|consensus | 764 | 99.85 | ||
| KOG2048|consensus | 691 | 99.85 | ||
| KOG1034|consensus | 385 | 99.85 | ||
| KOG0307|consensus | 1049 | 99.85 | ||
| KOG4328|consensus | 498 | 99.84 | ||
| KOG1274|consensus | 933 | 99.83 | ||
| KOG0321|consensus | 720 | 99.83 | ||
| KOG2445|consensus | 361 | 99.83 | ||
| KOG0290|consensus | 364 | 99.83 | ||
| KOG2106|consensus | 626 | 99.83 | ||
| KOG2919|consensus | 406 | 99.82 | ||
| KOG0303|consensus | 472 | 99.82 | ||
| KOG2919|consensus | 406 | 99.82 | ||
| KOG0650|consensus | 733 | 99.82 | ||
| KOG2055|consensus | 514 | 99.81 | ||
| KOG2096|consensus | 420 | 99.81 | ||
| KOG1009|consensus | 434 | 99.79 | ||
| KOG1445|consensus | 1012 | 99.79 | ||
| KOG1587|consensus | 555 | 99.79 | ||
| KOG0303|consensus | 472 | 99.78 | ||
| KOG0290|consensus | 364 | 99.78 | ||
| KOG4378|consensus | 673 | 99.77 | ||
| KOG1007|consensus | 370 | 99.77 | ||
| KOG0642|consensus | 577 | 99.77 | ||
| KOG0644|consensus | 1113 | 99.76 | ||
| KOG1009|consensus | 434 | 99.76 | ||
| KOG1188|consensus | 376 | 99.75 | ||
| KOG1517|consensus | 1387 | 99.75 | ||
| KOG1517|consensus | 1387 | 99.75 | ||
| KOG1188|consensus | 376 | 99.74 | ||
| KOG1273|consensus | 405 | 99.73 | ||
| KOG2110|consensus | 391 | 99.72 | ||
| KOG1587|consensus | 555 | 99.72 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.72 | |
| KOG1034|consensus | 385 | 99.72 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.71 | |
| KOG0322|consensus | 323 | 99.71 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.71 | |
| KOG1524|consensus | 737 | 99.71 | ||
| KOG1523|consensus | 361 | 99.7 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.7 | |
| KOG2394|consensus | 636 | 99.7 | ||
| KOG1310|consensus | 758 | 99.69 | ||
| KOG0642|consensus | 577 | 99.69 | ||
| KOG1334|consensus | 559 | 99.69 | ||
| KOG1445|consensus | 1012 | 99.68 | ||
| KOG0650|consensus | 733 | 99.68 | ||
| KOG1272|consensus | 545 | 99.67 | ||
| KOG0644|consensus | 1113 | 99.66 | ||
| KOG0649|consensus | 325 | 99.65 | ||
| KOG1523|consensus | 361 | 99.65 | ||
| KOG1963|consensus | 792 | 99.64 | ||
| KOG1310|consensus | 758 | 99.64 | ||
| KOG4227|consensus | 609 | 99.64 | ||
| KOG1524|consensus | 737 | 99.63 | ||
| KOG1538|consensus | 1081 | 99.63 | ||
| KOG0649|consensus | 325 | 99.63 | ||
| KOG0771|consensus | 398 | 99.62 | ||
| KOG0771|consensus | 398 | 99.62 | ||
| KOG0322|consensus | 323 | 99.62 | ||
| KOG2139|consensus | 445 | 99.61 | ||
| KOG2111|consensus | 346 | 99.61 | ||
| KOG1538|consensus | 1081 | 99.61 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.59 | |
| KOG3881|consensus | 412 | 99.58 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.57 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.56 | |
| KOG1240|consensus | 1431 | 99.56 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.56 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.56 | |
| KOG1963|consensus | 792 | 99.54 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.54 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.54 | |
| KOG2394|consensus | 636 | 99.52 | ||
| KOG2110|consensus | 391 | 99.52 | ||
| KOG4227|consensus | 609 | 99.51 | ||
| KOG4497|consensus | 447 | 99.51 | ||
| KOG2139|consensus | 445 | 99.5 | ||
| KOG1272|consensus | 545 | 99.49 | ||
| KOG1409|consensus | 404 | 99.49 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.48 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.46 | |
| KOG3881|consensus | 412 | 99.46 | ||
| KOG1354|consensus | 433 | 99.45 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.45 | |
| KOG0974|consensus | 967 | 99.42 | ||
| KOG2111|consensus | 346 | 99.42 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.42 | |
| KOG2321|consensus | 703 | 99.4 | ||
| KOG1240|consensus | 1431 | 99.4 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.4 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.37 | |
| KOG0280|consensus | 339 | 99.37 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.36 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.34 | |
| KOG4547|consensus | 541 | 99.34 | ||
| KOG1064|consensus | 2439 | 99.34 | ||
| KOG0309|consensus | 1081 | 99.34 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.33 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.32 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.32 | |
| KOG2321|consensus | 703 | 99.32 | ||
| KOG4497|consensus | 447 | 99.32 | ||
| KOG0280|consensus | 339 | 99.31 | ||
| KOG1334|consensus | 559 | 99.29 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.28 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.27 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.25 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.25 | |
| KOG1409|consensus | 404 | 99.23 | ||
| KOG0974|consensus | 967 | 99.23 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.23 | |
| KOG2315|consensus | 566 | 99.22 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.19 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.17 | |
| KOG3914|consensus | 390 | 99.16 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.16 | |
| KOG1064|consensus | 2439 | 99.16 | ||
| KOG4532|consensus | 344 | 99.15 | ||
| KOG1354|consensus | 433 | 99.14 | ||
| KOG4547|consensus | 541 | 99.11 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.09 | |
| KOG0309|consensus | 1081 | 99.05 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.99 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.98 | |
| KOG2315|consensus | 566 | 98.96 | ||
| KOG2041|consensus | 1189 | 98.95 | ||
| KOG4190|consensus | 1034 | 98.94 | ||
| KOG2314|consensus | 698 | 98.93 | ||
| KOG4714|consensus | 319 | 98.92 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.89 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.89 | |
| KOG4532|consensus | 344 | 98.87 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.86 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.86 | |
| KOG2695|consensus | 425 | 98.85 | ||
| KOG0882|consensus | 558 | 98.85 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.83 | |
| KOG1955|consensus | 737 | 98.83 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.82 | |
| KOG4190|consensus | 1034 | 98.8 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.8 | |
| KOG2314|consensus | 698 | 98.76 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.76 | |
| KOG4714|consensus | 319 | 98.75 | ||
| KOG3914|consensus | 390 | 98.73 | ||
| KOG1832|consensus | 1516 | 98.73 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.73 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.68 | |
| KOG2041|consensus | 1189 | 98.67 | ||
| KOG1832|consensus | 1516 | 98.65 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.64 | |
| KOG0882|consensus | 558 | 98.6 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.6 | |
| KOG1912|consensus | 1062 | 98.57 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.57 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.56 | |
| KOG1275|consensus | 1118 | 98.51 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.5 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.5 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.48 | |
| KOG2066|consensus | 846 | 98.47 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.45 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.44 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.43 | |
| KOG1275|consensus | 1118 | 98.4 | ||
| KOG2695|consensus | 425 | 98.38 | ||
| KOG1645|consensus | 463 | 98.38 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.27 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.25 | |
| KOG1912|consensus | 1062 | 98.23 | ||
| KOG2114|consensus | 933 | 98.22 | ||
| KOG1645|consensus | 463 | 98.21 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.18 | |
| KOG2066|consensus | 846 | 98.18 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.17 | |
| KOG2114|consensus | 933 | 98.16 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.14 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.99 | |
| KOG1008|consensus | 783 | 97.98 | ||
| KOG1008|consensus | 783 | 97.97 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.94 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.9 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.85 | |
| KOG1920|consensus | 1265 | 97.77 | ||
| KOG4640|consensus | 665 | 97.76 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.75 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.73 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.73 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.67 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.65 | |
| KOG3621|consensus | 726 | 97.62 | ||
| KOG1920|consensus | 1265 | 97.62 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.61 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.59 | |
| KOG3621|consensus | 726 | 97.57 | ||
| KOG3617|consensus | 1416 | 97.57 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.53 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.47 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.44 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.34 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.34 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.33 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.3 | |
| PF12763 | 104 | EF-hand_4: Cytoskeletal-regulatory complex EF hand | 97.29 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.29 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.25 | |
| KOG4640|consensus | 665 | 97.21 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.18 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.09 | |
| KOG3617|consensus | 1416 | 97.07 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.03 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.01 | |
| KOG4649|consensus | 354 | 96.87 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.85 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.85 | |
| KOG1029|consensus | 1118 | 96.8 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 96.76 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.68 | |
| KOG2395|consensus | 644 | 96.64 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.58 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 96.57 | |
| KOG4441|consensus | 571 | 96.53 | ||
| KOG2079|consensus | 1206 | 96.44 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.43 | |
| KOG2444|consensus | 238 | 96.43 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.41 | |
| KOG2079|consensus | 1206 | 96.39 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 96.39 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.39 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.37 | |
| KOG2444|consensus | 238 | 96.3 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.19 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.1 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.1 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.06 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.01 | |
| KOG2395|consensus | 644 | 95.89 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 95.87 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.69 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.67 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.65 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.63 | |
| KOG2377|consensus | 657 | 95.62 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 95.41 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.39 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 95.38 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 95.31 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.21 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 95.19 | |
| KOG3630|consensus | 1405 | 95.18 | ||
| KOG2377|consensus | 657 | 94.87 | ||
| KOG4499|consensus | 310 | 94.63 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 94.63 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.27 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 94.18 | |
| KOG1916|consensus | 1283 | 93.79 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.64 | |
| KOG4441|consensus | 571 | 93.52 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 93.2 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 93.16 | |
| KOG4649|consensus | 354 | 92.9 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 92.79 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 92.72 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 92.56 | |
| KOG3630|consensus | 1405 | 92.53 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 92.33 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 92.29 | |
| KOG2247|consensus | 615 | 92.01 | ||
| KOG1916|consensus | 1283 | 91.98 | ||
| KOG2247|consensus | 615 | 91.81 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 91.76 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 91.72 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 91.64 | |
| PRK10115 | 686 | protease 2; Provisional | 91.29 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 91.08 | |
| KOG4499|consensus | 310 | 90.86 | ||
| KOG4460|consensus | 741 | 90.14 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 89.73 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 89.6 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 89.55 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 89.34 | |
| KOG2280|consensus | 829 | 88.93 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 88.88 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 88.79 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 88.77 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 88.71 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 88.7 | |
| KOG1897|consensus | 1096 | 88.33 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 87.85 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 87.53 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 87.34 | |
| KOG1983|consensus | 993 | 87.29 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 87.03 | |
| KOG1983|consensus | 993 | 86.59 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 86.54 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 86.27 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 86.17 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 86.15 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 86.08 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 86.03 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 85.57 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 85.55 | |
| KOG1900|consensus | 1311 | 85.51 | ||
| PHA02790 | 480 | Kelch-like protein; Provisional | 84.67 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 84.0 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 83.14 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 82.96 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 82.75 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 82.27 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 82.24 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 81.97 | |
| KOG4460|consensus | 741 | 81.91 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 80.92 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 80.26 | |
| PLN02193 | 470 | nitrile-specifier protein | 80.18 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=317.96 Aligned_cols=299 Identities=19% Similarity=0.241 Sum_probs=264.8
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~- 100 (437)
.-.|.|+.|+ |++..++||+.|.++|+||. |..++..+.|+|++..+ +.+.+|+|++||...++++
T Consensus 115 ~e~Vl~~~fs-p~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g 193 (480)
T KOG0271|consen 115 GEAVLSVQFS-PTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG 193 (480)
T ss_pred CCcEEEEEec-CCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc
Confidence 4458999999 89999999999999999993 45779999999999988 6678999999998877654
Q ss_pred ----ccCCCcceEEeeCC----CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 101 ----PFPLSRQDVAWHLL----HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 101 ----~~~~~v~~~~~sp~----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
.|+..|++++|.|. ..++||+++.||.|+|||+. ....+..+.+|+.+|+|+.|--+| +|++|+.|+
T Consensus 194 ~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~---~~~~~~~lsgHT~~VTCvrwGG~g--liySgS~Dr 268 (480)
T KOG0271|consen 194 RALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK---LGTCVRTLSGHTASVTCVRWGGEG--LIYSGSQDR 268 (480)
T ss_pred ccccCcccceeEEeecccccCCCccceecccCCCCEEEEEcc---CceEEEEeccCccceEEEEEcCCc--eEEecCCCc
Confidence 36789999999874 35699999999999999998 667889999999999999998555 699999999
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEc-----------CCCCc------------------------EEEEEeCCCe
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWS-----------PHNET------------------------ILASSGTDRR 217 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~-----------p~~~~------------------------~l~sg~~dg~ 217 (437)
+|++|+...+.. ...+++|...|+.++.+ |.++. .+++|+.|.+
T Consensus 269 tIkvw~a~dG~~-~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~t 347 (480)
T KOG0271|consen 269 TIKVWRALDGKL-CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFT 347 (480)
T ss_pred eEEEEEccchhH-HHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCce
Confidence 999999998665 88999999999999877 22321 4899999999
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
+.+|+..... +++..+.+|...|+.+.|+||++ ++|+++.|..|++||.++|+.+..++. |..
T Consensus 348 lflW~p~~~k-------------kpi~rmtgHq~lVn~V~fSPd~r-~IASaSFDkSVkLW~g~tGk~lasfRG---Hv~ 410 (480)
T KOG0271|consen 348 LFLWNPFKSK-------------KPITRMTGHQALVNHVSFSPDGR-YIASASFDKSVKLWDGRTGKFLASFRG---HVA 410 (480)
T ss_pred EEEecccccc-------------cchhhhhchhhheeeEEECCCcc-EEEEeecccceeeeeCCCcchhhhhhh---ccc
Confidence 9999987643 33445789999999999999999 899999999999999999999988875 567
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+..++||.|.++|++|+.|.+ +++||+.+.+....+.||.++|.++.++|||..+++.
T Consensus 411 ~VYqvawsaDsRLlVS~SkDsT-----------LKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sg 469 (480)
T KOG0271|consen 411 AVYQVAWSADSRLLVSGSKDST-----------LKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASG 469 (480)
T ss_pred eeEEEEeccCccEEEEcCCCce-----------EEEEEeeeeeecccCCCCCceEEEEEecCCCceeecC
Confidence 7888999999999999999999 8999999999999999999999999999999988775
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=305.23 Aligned_cols=273 Identities=20% Similarity=0.277 Sum_probs=240.8
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC-
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL- 114 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~- 114 (437)
.+..+.|+ ++++.|+|||.+|.+|+|+..+....... -+ |...+.++.|+|.
T Consensus 177 Pis~~~fS-~ds~~laT~swsG~~kvW~~~~~~~~~~l-~g-------------------------H~~~v~~~~fhP~~ 229 (459)
T KOG0272|consen 177 PISGCSFS-RDSKHLATGSWSGLVKVWSVPQCNLLQTL-RG-------------------------HTSRVGAAVFHPVD 229 (459)
T ss_pred cceeeEee-cCCCeEEEeecCCceeEeecCCcceeEEE-ec-------------------------cccceeeEEEccCC
Confidence 35556677 99999999999999999998766444332 12 3456779999997
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
++..+|+|+.||++++|++. ...++..+.+|..+|..++|+|+|++ |+|++.|.+-++||+++... +....+|..
T Consensus 230 ~~~~lat~s~Dgtvklw~~~---~e~~l~~l~gH~~RVs~VafHPsG~~-L~TasfD~tWRlWD~~tk~E-lL~QEGHs~ 304 (459)
T KOG0272|consen 230 SDLNLATASADGTVKLWKLS---QETPLQDLEGHLARVSRVAFHPSGKF-LGTASFDSTWRLWDLETKSE-LLLQEGHSK 304 (459)
T ss_pred CccceeeeccCCceeeeccC---CCcchhhhhcchhhheeeeecCCCce-eeecccccchhhcccccchh-hHhhccccc
Confidence 46789999999999999999 55788999999999999999999996 99999999999999999766 667789999
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
+|.+++|+|||. +++||+.|..-+|||++++.+ +..+.+|..+|.+|+|+|+|- .++|||.|++
T Consensus 305 ~v~~iaf~~DGS-L~~tGGlD~~~RvWDlRtgr~--------------im~L~gH~k~I~~V~fsPNGy-~lATgs~Dnt 368 (459)
T KOG0272|consen 305 GVFSIAFQPDGS-LAATGGLDSLGRVWDLRTGRC--------------IMFLAGHIKEILSVAFSPNGY-HLATGSSDNT 368 (459)
T ss_pred ccceeEecCCCc-eeeccCccchhheeecccCcE--------------EEEecccccceeeEeECCCce-EEeecCCCCc
Confidence 999999999998 799999999999999999854 455889999999999999998 8999999999
Q ss_pred EEEEeCCCCCCceeeeeeecccCCceeeeecC-CCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGISSTASP-TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
++|||++..+.+..+.. |.+-+..+.|+| .|.+|++++.|.+ +++|...++.+++++.||++.|.
T Consensus 369 ~kVWDLR~r~~ly~ipA---H~nlVS~Vk~~p~~g~fL~TasyD~t-----------~kiWs~~~~~~~ksLaGHe~kV~ 434 (459)
T KOG0272|consen 369 CKVWDLRMRSELYTIPA---HSNLVSQVKYSPQEGYFLVTASYDNT-----------VKIWSTRTWSPLKSLAGHEGKVI 434 (459)
T ss_pred EEEeeecccccceeccc---ccchhhheEecccCCeEEEEcccCcc-----------eeeecCCCcccchhhcCCccceE
Confidence 99999998888766654 667778889998 8899999999999 89999999999999999999999
Q ss_pred ccCCCCCCccccccccc
Q psy4571 354 DRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 354 ~~~~~~~~~~~~~~~w~ 370 (437)
.+..++++..++++-|+
T Consensus 435 s~Dis~d~~~i~t~s~D 451 (459)
T KOG0272|consen 435 SLDISPDSQAIATSSFD 451 (459)
T ss_pred EEEeccCCceEEEeccC
Confidence 99999999988877554
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=274.49 Aligned_cols=283 Identities=19% Similarity=0.255 Sum_probs=234.8
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecccccc-CCCcc
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPF-PLSRQ 107 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~-~~~v~ 107 (437)
.++=+.-.|+++-|. ++.++|+++|.||.+.|||..+..-... ++. ...|.
T Consensus 50 ~LkGH~~Ki~~~~ws-~Dsr~ivSaSqDGklIvWDs~TtnK~ha---------------------------ipl~s~WVM 101 (343)
T KOG0286|consen 50 TLKGHLNKIYAMDWS-TDSRRIVSASQDGKLIVWDSFTTNKVHA---------------------------IPLPSSWVM 101 (343)
T ss_pred EecccccceeeeEec-CCcCeEEeeccCCeEEEEEcccccceeE---------------------------EecCceeEE
Confidence 344445555556665 5556666666666666666443221111 122 24688
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCC---CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHN---VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.++|+| .++++|+|+-|+...||++...+ ..+..+.+.+|++.+.|+.|-+|+. |+|++-|.+..+||+++++.
T Consensus 102 tCA~sP-Sg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~--ilT~SGD~TCalWDie~g~~ 178 (343)
T KOG0286|consen 102 TCAYSP-SGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH--ILTGSGDMTCALWDIETGQQ 178 (343)
T ss_pred EEEECC-CCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc--eEecCCCceEEEEEcccceE
Confidence 999999 79999999999999999998542 2245677899999999999998765 99999999999999999777
Q ss_pred eeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 185 KLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
...+.+|.+.|.+++++| +++ .+++|+.|+..++||++.+... +++.+|+..|++|.|.|+|.
T Consensus 179 -~~~f~GH~gDV~slsl~p~~~n-tFvSg~cD~~aklWD~R~~~c~--------------qtF~ghesDINsv~ffP~G~ 242 (343)
T KOG0286|consen 179 -TQVFHGHTGDVMSLSLSPSDGN-TFVSGGCDKSAKLWDVRSGQCV--------------QTFEGHESDINSVRFFPSGD 242 (343)
T ss_pred -EEEecCCcccEEEEecCCCCCC-eEEecccccceeeeeccCccee--------------EeecccccccceEEEccCCC
Confidence 889999999999999999 666 5999999999999999997554 45999999999999999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
-+++|+.|+++++||++..+.+..+... ....++.+++||..|++|.+|..|.+ ..+||.-.++.+.
T Consensus 243 -afatGSDD~tcRlyDlRaD~~~a~ys~~-~~~~gitSv~FS~SGRlLfagy~d~~-----------c~vWDtlk~e~vg 309 (343)
T KOG0286|consen 243 -AFATGSDDATCRLYDLRADQELAVYSHD-SIICGITSVAFSKSGRLLFAGYDDFT-----------CNVWDTLKGERVG 309 (343)
T ss_pred -eeeecCCCceeEEEeecCCcEEeeeccC-cccCCceeEEEcccccEEEeeecCCc-----------eeEeeccccceEE
Confidence 7999999999999999999888777633 34567888999999999999999988 7999999999999
Q ss_pred hhcCCCccccccCCCCCCcccccccccc
Q psy4571 344 QLLGTEEESSDRHSSDNDTEDLNSIWSM 371 (437)
Q Consensus 344 ~~~~h~~~~~~~~~~~~~~~~~~~~w~~ 371 (437)
.|.||++.|+++..+|||..+++.-|+-
T Consensus 310 ~L~GHeNRvScl~~s~DG~av~TgSWDs 337 (343)
T KOG0286|consen 310 VLAGHENRVSCLGVSPDGMAVATGSWDS 337 (343)
T ss_pred EeeccCCeeEEEEECCCCcEEEecchhH
Confidence 9999999999999999999999998864
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=279.58 Aligned_cols=265 Identities=18% Similarity=0.243 Sum_probs=228.1
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeec------------CCCceeEEEecCCC------CeEEEecCceEEEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK------------NTPFLYDLVVNNYV------ANISCILNISILFF 92 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~------------~~~~~~~~~~~~~~------~~i~~~~~~~i~~~ 92 (437)
+-+..=|.|++++ |+++.||+|+.||+|++|+. |...+..++|.|.. ...+++.||+++||
T Consensus 154 KgH~~WVlcvaws-PDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIW 232 (480)
T KOG0271|consen 154 KGHKNWVLCVAWS-PDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIW 232 (480)
T ss_pred cCCccEEEEEEEC-CCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEE
Confidence 3345569999999 99999999999999999994 44557777775432 23367789999999
Q ss_pred Eeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC---------
Q psy4571 93 EIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP--------- 159 (437)
Q Consensus 93 ~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--------- 159 (437)
|...+... .|..+|+|++|- +..++++|+.|++|++|+.. .+...+.+++|...|+.++.+.
T Consensus 233 d~~~~~~~~~lsgHT~~VTCvrwG--G~gliySgS~DrtIkvw~a~---dG~~~r~lkGHahwvN~lalsTdy~LRtgaf 307 (480)
T KOG0271|consen 233 DTKLGTCVRTLSGHTASVTCVRWG--GEGLIYSGSQDRTIKVWRAL---DGKLCRELKGHAHWVNHLALSTDYVLRTGAF 307 (480)
T ss_pred EccCceEEEEeccCccceEEEEEc--CCceEEecCCCceEEEEEcc---chhHHHhhcccchheeeeeccchhhhhcccc
Confidence 98765543 477899999997 47899999999999999998 5788899999999999999882
Q ss_pred --CCC------------------------cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 160 --YSE------------------------YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 160 --~~~------------------------~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
.+. ..|++|+.|.++.+|+....+.++..+.+|..-|+.+.|+||+++ +|+++
T Consensus 308 ~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~-IASaS 386 (480)
T KOG0271|consen 308 DHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRY-IASAS 386 (480)
T ss_pred ccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccE-EEEee
Confidence 121 149999999999999999888889899999999999999999995 99999
Q ss_pred CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee
Q psy4571 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 293 (437)
.|..|++||.++++-. .++.||-+.|+.++|+.|.+ ++++|+.|.++++|++++.+....+..
T Consensus 387 FDkSVkLW~g~tGk~l--------------asfRGHv~~VYqvawsaDsR-LlVS~SkDsTLKvw~V~tkKl~~DLpG-- 449 (480)
T KOG0271|consen 387 FDKSVKLWDGRTGKFL--------------ASFRGHVAAVYQVAWSADSR-LLVSGSKDSTLKVWDVRTKKLKQDLPG-- 449 (480)
T ss_pred cccceeeeeCCCcchh--------------hhhhhccceeEEEEeccCcc-EEEEcCCCceEEEEEeeeeeecccCCC--
Confidence 9999999999998654 44899999999999999999 999999999999999999887777664
Q ss_pred cccCCceeeeecCCCCcccccCCCCcc
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
|...+..+.|+|||..+++|+.|..+
T Consensus 450 -h~DEVf~vDwspDG~rV~sggkdkv~ 475 (480)
T KOG0271|consen 450 -HADEVFAVDWSPDGQRVASGGKDKVL 475 (480)
T ss_pred -CCceEEEEEecCCCceeecCCCceEE
Confidence 56778888999999999999999984
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=276.16 Aligned_cols=238 Identities=20% Similarity=0.274 Sum_probs=213.5
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC-CCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~sgs~dg~i~lwd~~~ 181 (437)
..++..+.|++ ++..|++|+.+|.++||+.. +...+..+.+|...|.++.|+|. ...-++||+.||++++|++.+
T Consensus 175 ~rPis~~~fS~-ds~~laT~swsG~~kvW~~~---~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~ 250 (459)
T KOG0272|consen 175 TRPISGCSFSR-DSKHLATGSWSGLVKVWSVP---QCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ 250 (459)
T ss_pred CCcceeeEeec-CCCeEEEeecCCceeEeecC---CcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC
Confidence 46889999999 78999999999999999998 55788999999999999999998 233499999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
. .++..+.+|...|..++|+|+|++ |+|++.|.+-++||+++..... ..+||...|.+++|+||
T Consensus 251 e-~~l~~l~gH~~RVs~VafHPsG~~-L~TasfD~tWRlWD~~tk~ElL--------------~QEGHs~~v~~iaf~~D 314 (459)
T KOG0272|consen 251 E-TPLQDLEGHLARVSRVAFHPSGKF-LGTASFDSTWRLWDLETKSELL--------------LQEGHSKGVFSIAFQPD 314 (459)
T ss_pred C-cchhhhhcchhhheeeeecCCCce-eeecccccchhhcccccchhhH--------------hhcccccccceeEecCC
Confidence 4 558999999999999999999994 9999999999999999975433 36799999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
|. +++|||.|..-+|||+++|+++..+.. |...+..++|+|+|..+|+|+.|++ .+|||+...++
T Consensus 315 GS-L~~tGGlD~~~RvWDlRtgr~im~L~g---H~k~I~~V~fsPNGy~lATgs~Dnt-----------~kVWDLR~r~~ 379 (459)
T KOG0272|consen 315 GS-LAATGGLDSLGRVWDLRTGRCIMFLAG---HIKEILSVAFSPNGYHLATGSSDNT-----------CKVWDLRMRSE 379 (459)
T ss_pred Cc-eeeccCccchhheeecccCcEEEEecc---cccceeeEeECCCceEEeecCCCCc-----------EEEeeeccccc
Confidence 99 999999999999999999998877765 6788899999999999999999999 79999999999
Q ss_pred hhhhcCCCccccccCCCC-CCcccccc-------ccccCHHH
Q psy4571 342 QRQLLGTEEESSDRHSSD-NDTEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~~~~-~~~~~~~~-------~w~~~~~~ 375 (437)
+..+.+|.+.|+.+.++| .|..++++ +|+..+-+
T Consensus 380 ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~ 421 (459)
T KOG0272|consen 380 LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS 421 (459)
T ss_pred ceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcc
Confidence 999999999999999998 66666665 77764433
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=248.51 Aligned_cols=281 Identities=17% Similarity=0.202 Sum_probs=224.9
Q ss_pred cCCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCc
Q psy4571 27 ALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSR 106 (437)
Q Consensus 27 ~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v 106 (437)
+..+..++--|..++....+.++++++++|.++-+|+.+... . ..+. + ++ .-..|...|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd---~---~~G~-~-------~r-------~~~GHsH~v 66 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDD---I---KYGV-P-------VR-------RLTGHSHFV 66 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCc---c---ccCc-e-------ee-------eeeccceEe
Confidence 345677788899999886668999999999999999976541 1 0000 0 00 011245678
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
++++.++ +++++++++.|+++++||+. .++..+.|.+|...|.+++|+||++. +++|+.|.+|++|+...... +
T Consensus 67 ~dv~~s~-dg~~alS~swD~~lrlWDl~---~g~~t~~f~GH~~dVlsva~s~dn~q-ivSGSrDkTiklwnt~g~ck-~ 140 (315)
T KOG0279|consen 67 SDVVLSS-DGNFALSASWDGTLRLWDLA---TGESTRRFVGHTKDVLSVAFSTDNRQ-IVSGSRDKTIKLWNTLGVCK-Y 140 (315)
T ss_pred cceEEcc-CCceEEeccccceEEEEEec---CCcEEEEEEecCCceEEEEecCCCce-eecCCCcceeeeeeecccEE-E
Confidence 8999999 78999999999999999999 56788899999999999999999995 99999999999999987443 3
Q ss_pred eEecc-CCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 187 HSFES-HKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 187 ~~~~~-h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
..... +.+-|.|++|+|+ .+ ++++++.|++|++||+++.+... .+.+|.+.++.++++|||.
T Consensus 141 t~~~~~~~~WVscvrfsP~~~~p-~Ivs~s~DktvKvWnl~~~~l~~--------------~~~gh~~~v~t~~vSpDGs 205 (315)
T KOG0279|consen 141 TIHEDSHREWVSCVRFSPNESNP-IIVSASWDKTVKVWNLRNCQLRT--------------TFIGHSGYVNTVTVSPDGS 205 (315)
T ss_pred EEecCCCcCcEEEEEEcCCCCCc-EEEEccCCceEEEEccCCcchhh--------------ccccccccEEEEEECCCCC
Confidence 33222 3788999999998 55 69999999999999999865443 4789999999999999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
+.++|+.||.+.+||++.++.++.+. +...+.+++|+|+-..|+.+.... |+|||+.++..+.
T Consensus 206 -lcasGgkdg~~~LwdL~~~k~lysl~----a~~~v~sl~fspnrywL~~at~~s------------IkIwdl~~~~~v~ 268 (315)
T KOG0279|consen 206 -LCASGGKDGEAMLWDLNEGKNLYSLE----AFDIVNSLCFSPNRYWLCAATATS------------IKIWDLESKAVVE 268 (315)
T ss_pred -EEecCCCCceEEEEEccCCceeEecc----CCCeEeeEEecCCceeEeeccCCc------------eEEEeccchhhhh
Confidence 99999999999999999999877665 455677789999999998887665 7999999999888
Q ss_pred hhcC----C-----CccccccCCCCCCccccc
Q psy4571 344 QLLG----T-----EEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 344 ~~~~----h-----~~~~~~~~~~~~~~~~~~ 366 (437)
.+.- . ......++++++|..+..
T Consensus 269 ~l~~d~~g~s~~~~~~~clslaws~dG~tLf~ 300 (315)
T KOG0279|consen 269 ELKLDGIGPSSKAGDPICLSLAWSADGQTLFA 300 (315)
T ss_pred hccccccccccccCCcEEEEEEEcCCCcEEEe
Confidence 7722 1 223444568888876544
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=265.04 Aligned_cols=268 Identities=19% Similarity=0.314 Sum_probs=232.4
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~- 100 (437)
.-.|+.++|. |+|++|++|+..|...+|+ .|...+..+.|++.+... +...+|.|++|+.......
T Consensus 96 kc~V~~v~Wt-PeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~ 174 (464)
T KOG0284|consen 96 KCPVNVVRWT-PEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI 174 (464)
T ss_pred ccceeeEEEc-CCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH
Confidence 4568889999 9999999999999999999 356778889998887765 6778889999996543321
Q ss_pred ---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 101 ---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
.+...|++++|+| ++..|++++.||+|+|||.. ..++.+.+.+|.-.|.+++|+|... ++++|+.|..|++|
T Consensus 175 ~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~---~~kee~vL~GHgwdVksvdWHP~kg-LiasgskDnlVKlW 249 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFR---MPKEERVLRGHGWDVKSVDWHPTKG-LIASGSKDNLVKLW 249 (464)
T ss_pred hhHhhhhhhheeccCC-CCceeEEecCCCeEEEEecc---CCchhheeccCCCCcceeccCCccc-eeEEccCCceeEee
Confidence 2447999999999 78899999999999999998 6677777899999999999999888 79999999999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
|.+++.+ +.++.+|+..|..+.|+|+++ +|+|+|.|..++++|+++.+. ++++.+|+..|+++.
T Consensus 250 DprSg~c-l~tlh~HKntVl~~~f~~n~N-~Llt~skD~~~kv~DiR~mkE--------------l~~~r~Hkkdv~~~~ 313 (464)
T KOG0284|consen 250 DPRSGSC-LATLHGHKNTVLAVKFNPNGN-WLLTGSKDQSCKVFDIRTMKE--------------LFTYRGHKKDVTSLT 313 (464)
T ss_pred cCCCcch-hhhhhhccceEEEEEEcCCCC-eeEEccCCceEEEEehhHhHH--------------HHHhhcchhhheeec
Confidence 9999766 889999999999999999997 599999999999999997644 455889999999999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
|+|-...+|++|+.||.|..|.+...+++..+. ..|...+.+++|+|-|.+|++|+.|.+++.|.+
T Consensus 314 WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~--~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 314 WHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIP--PAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cccccccceeeccCCCceEEEeccccccccCCC--cccccceeeeeccccceeEeecCCCcceeeecc
Confidence 999988899999999999999998665555543 346677888999999999999999999655543
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=241.12 Aligned_cols=279 Identities=15% Similarity=0.194 Sum_probs=226.5
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEe-----------cCCCCeEEEecCceEEEEEeeeccccc------cCCCcceE
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVV-----------NNYVANISCILNISILFFEIIFTQNFP------FPLSRQDV 109 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~-----------~~~~~~i~~~~~~~i~~~~~~~~~~~~------~~~~v~~~ 109 (437)
.-+|+++|.|.+||+|...+|.++..+. .++...+++.+.-.|++||+......+ +...|.++
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaV 89 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAV 89 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEE
Confidence 5689999999999999998888776654 344455566677789999998776543 35789999
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~ 189 (437)
.|.. +++.+++|+.||+++|||++.. .......|..+|+++..+|+... |++|..+|.|++||+.........+
T Consensus 90 gF~~-dgrWMyTgseDgt~kIWdlR~~----~~qR~~~~~spVn~vvlhpnQte-Lis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 90 GFQC-DGRWMYTGSEDGTVKIWDLRSL----SCQRNYQHNSPVNTVVLHPNQTE-LISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred EEee-cCeEEEecCCCceEEEEeccCc----ccchhccCCCCcceEEecCCcce-EEeecCCCcEEEEEccCCccccccC
Confidence 9999 7899999999999999999942 22333357799999999999886 9999999999999999854423334
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
..-...|.++...|+|.. ++.+...|+.++|++-+...... .+++..+..|+..+....+||+++ +|+++
T Consensus 164 Pe~~~~i~sl~v~~dgsm-l~a~nnkG~cyvW~l~~~~~~s~--------l~P~~k~~ah~~~il~C~lSPd~k-~lat~ 233 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSM-LAAANNKGNCYVWRLLNHQTASE--------LEPVHKFQAHNGHILRCLLSPDVK-YLATC 233 (311)
T ss_pred CCCCcceeeEEEcCCCcE-EEEecCCccEEEEEccCCCcccc--------ceEhhheecccceEEEEEECCCCc-EEEee
Confidence 445578999999999994 88888899999999988543332 355667889999999999999999 79999
Q ss_pred eCCCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 270 SEDNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 270 ~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|.|.+++||+.++. +....+. .+..-...++||.||++|++|+.|+. .++||++.+++++...||
T Consensus 234 ssdktv~iwn~~~~~kle~~l~---gh~rWvWdc~FS~dg~YlvTassd~~-----------~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 234 SSDKTVKIWNTDDFFKLELVLT---GHQRWVWDCAFSADGEYLVTASSDHT-----------ARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred cCCceEEEEecCCceeeEEEee---cCCceEEeeeeccCccEEEecCCCCc-----------eeecccccCceeeecCCc
Confidence 99999999999987 2222222 24456778899999999999999988 799999999999999999
Q ss_pred Ccccccc
Q psy4571 349 EEESSDR 355 (437)
Q Consensus 349 ~~~~~~~ 355 (437)
-....+.
T Consensus 300 ~K~~vc~ 306 (311)
T KOG0315|consen 300 HKAAVCV 306 (311)
T ss_pred ccccEEE
Confidence 7655544
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=280.26 Aligned_cols=282 Identities=17% Similarity=0.250 Sum_probs=232.4
Q ss_pred cceeEEecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeee--
Q psy4571 20 NAFFTWSALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIF-- 96 (437)
Q Consensus 20 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~-- 96 (437)
..+|. .......-++.|+.|+ ++..++|.|-.|-.|++|.....++..+.-......+ ..+.|-.+...|...
T Consensus 367 pSic~---YT~~nt~~~v~ca~fS-ddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~ 442 (707)
T KOG0263|consen 367 PSICM---YTFHNTYQGVTCAEFS-DDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSG 442 (707)
T ss_pred CcEEE---EEEEEcCCcceeEeec-CCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCc
Confidence 45555 3455667788999999 9999999999999999999765443333222222222 222233344444221
Q ss_pred --ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 97 --TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 97 --~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
..-..|..+|..+.|+| +.++|++++.|+++|+|.+. +...+-.+++|..+|+++.|+|.|-| ||||+.|++.
T Consensus 443 ~~~~L~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~---t~s~~V~y~GH~~PVwdV~F~P~GyY-Fatas~D~tA 517 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLD---TWSCLVIYKGHLAPVWDVQFAPRGYY-FATASHDQTA 517 (707)
T ss_pred eeEEeecCCCceeeeeecc-cccceeeccCCcceeeeecc---cceeEEEecCCCcceeeEEecCCceE-EEecCCCcee
Confidence 22345789999999999 68899999999999999999 66778888999999999999999987 9999999999
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
++|.... ..+++.+.+|.+.|.|+.|+|+..+ +++||.|.+|++||+.++.. ++.+.||+++|.
T Consensus 518 rLWs~d~-~~PlRifaghlsDV~cv~FHPNs~Y-~aTGSsD~tVRlWDv~~G~~--------------VRiF~GH~~~V~ 581 (707)
T KOG0263|consen 518 RLWSTDH-NKPLRIFAGHLSDVDCVSFHPNSNY-VATGSSDRTVRLWDVSTGNS--------------VRIFTGHKGPVT 581 (707)
T ss_pred eeeeccc-CCchhhhcccccccceEEECCcccc-cccCCCCceEEEEEcCCCcE--------------EEEecCCCCceE
Confidence 9999998 4458899999999999999999986 99999999999999999754 566899999999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF 334 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~w 334 (437)
+++|+|+|. .|++|+.||.|++||+.+++.+..+.. |...+.++.||.+|..|++|+.|.+ +++|
T Consensus 582 al~~Sp~Gr-~LaSg~ed~~I~iWDl~~~~~v~~l~~---Ht~ti~SlsFS~dg~vLasgg~Dns-----------V~lW 646 (707)
T KOG0263|consen 582 ALAFSPCGR-YLASGDEDGLIKIWDLANGSLVKQLKG---HTGTIYSLSFSRDGNVLASGGADNS-----------VRLW 646 (707)
T ss_pred EEEEcCCCc-eEeecccCCcEEEEEcCCCcchhhhhc---ccCceeEEEEecCCCEEEecCCCCe-----------EEEE
Confidence 999999999 799999999999999999998888776 4667788899999999999999999 7888
Q ss_pred cchhhhh
Q psy4571 335 DILVCEE 341 (437)
Q Consensus 335 d~~~~~~ 341 (437)
|+..-..
T Consensus 647 D~~~~~~ 653 (707)
T KOG0263|consen 647 DLTKVIE 653 (707)
T ss_pred Echhhcc
Confidence 8865443
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=250.41 Aligned_cols=262 Identities=21% Similarity=0.328 Sum_probs=230.2
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeec---
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFT--- 97 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~--- 97 (437)
...-.|.+++|+ .+|+.|+||+.||.+|+|+. |.+.++.+.|+..+.++ +...|+++.+||...+
T Consensus 233 ~~nkdVT~L~Wn-~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~ 311 (524)
T KOG0273|consen 233 PSNKDVTSLDWN-NDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK 311 (524)
T ss_pred CccCCcceEEec-CCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE
Confidence 445789999999 99999999999999999994 46889999999998887 7778999999998654
Q ss_pred cccccCCCc-ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 98 QNFPFPLSR-QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 98 ~~~~~~~~v-~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+.+.+.... -++.|-- ..-|++++.||.|+|+.+. ...++.++.+|.++|.++.|+|.|. +|++++.|++++|
T Consensus 312 q~f~~~s~~~lDVdW~~--~~~F~ts~td~~i~V~kv~---~~~P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~Tlki 385 (524)
T KOG0273|consen 312 QQFEFHSAPALDVDWQS--NDEFATSSTDGCIHVCKVG---EDRPVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKI 385 (524)
T ss_pred EeeeeccCCccceEEec--CceEeecCCCceEEEEEec---CCCcceeeecccCceEEEEECCCCc-eEEEecCCCeeEe
Confidence 455666666 7799975 5679999999999999998 6789999999999999999999999 7999999999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCC--------cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNE--------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
|.+..... ...+.+|...|+.+.|+|+|+ ..+++++.|++|++||+..+ .+++.+..
T Consensus 386 Ws~~~~~~-~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g--------------v~i~~f~k 450 (524)
T KOG0273|consen 386 WSMGQSNS-VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG--------------VPIHTLMK 450 (524)
T ss_pred eecCCCcc-hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC--------------ceeEeecc
Confidence 99887554 788999999999999999753 36889999999999999986 45677899
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
|..+|++++|+|+|+ ++++|+.||.|.+|+.++++..+.+.. ..++..++|+.+|..+..+-.|+.+
T Consensus 451 H~~pVysvafS~~g~-ylAsGs~dg~V~iws~~~~~l~~s~~~----~~~Ifel~Wn~~G~kl~~~~sd~~v 517 (524)
T KOG0273|consen 451 HQEPVYSVAFSPNGR-YLASGSLDGCVHIWSTKTGKLVKSYQG----TGGIFELCWNAAGDKLGACASDGSV 517 (524)
T ss_pred CCCceEEEEecCCCc-EEEecCCCCeeEeccccchheeEeecC----CCeEEEEEEcCCCCEEEEEecCCCc
Confidence 999999999999999 799999999999999999988888763 4456778999999999999888883
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=251.78 Aligned_cols=296 Identities=16% Similarity=0.204 Sum_probs=253.9
Q ss_pred ccceeEEEEeeCCCcc-eEEEeeccCceEeeecC-------------------------CCceeEEEecCCCCeE-EEec
Q psy4571 33 SIYRFYRLCVAEPFDD-AVEERVINEEYKIWKKN-------------------------TPFLYDLVVNNYVANI-SCIL 85 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~-------------------------~~~~~~~~~~~~~~~i-~~~~ 85 (437)
+...|.+++|+ |..+ ++++|+.|-+.|+|+.. +..+..+.|+..+..+ +...
T Consensus 177 ~~~~V~~~~Wn-P~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 177 HESEVFICAWN-PLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred CCCceEEEecC-chhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 55668999999 6555 99999999999999932 2458889999888877 6678
Q ss_pred CceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC
Q psy4571 86 NISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 86 ~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
+|.+++|+...... -.++.+|.++.|+. .+.+|++++.||++.+||.. .+...+.+..|..+-.++.|-.+..
T Consensus 256 ~G~~riw~~~G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~---~g~~~q~f~~~s~~~lDVdW~~~~~ 331 (524)
T KOG0273|consen 256 DGEARIWNKDGNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAH---TGTVKQQFEFHSAPALDVDWQSNDE 331 (524)
T ss_pred CcEEEEEecCchhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEecc---CceEEEeeeeccCCccceEEecCce
Confidence 99999999654432 24678999999999 68999999999999999998 5566777888888878899987765
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
+++++.|+.|+++.+.. +.|..++.+|.++|.++.|+|.|. +|++++.|++++||.+........
T Consensus 332 --F~ts~td~~i~V~kv~~-~~P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~TlkiWs~~~~~~~~~----------- 396 (524)
T KOG0273|consen 332 --FATSSTDGCIHVCKVGE-DRPVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKIWSMGQSNSVHD----------- 396 (524)
T ss_pred --EeecCCCceEEEEEecC-CCcceeeecccCceEEEEECCCCc-eEEEecCCCeeEeeecCCCcchhh-----------
Confidence 89999999999999987 556889999999999999999998 899999999999999887655443
Q ss_pred EEEecCccccEEEEEEccCCC--------eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEP--------WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~--------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
+.+|...|..+.|+|.|+ ..+++++.|++|++||+..+.++..+.. |...+..++|||+|+++|+|
T Consensus 397 ---l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k---H~~pVysvafS~~g~ylAsG 470 (524)
T KOG0273|consen 397 ---LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK---HQEPVYSVAFSPNGRYLASG 470 (524)
T ss_pred ---hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc---CCCceEEEEecCCCcEEEec
Confidence 789999999999999763 4788999999999999999999888743 66778889999999999999
Q ss_pred CCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.|+. +.+|+..+++..+.+.+.. .+..+.++.+|..+..
T Consensus 471 s~dg~-----------V~iws~~~~~l~~s~~~~~-~Ifel~Wn~~G~kl~~ 510 (524)
T KOG0273|consen 471 SLDGC-----------VHIWSTKTGKLVKSYQGTG-GIFELCWNAAGDKLGA 510 (524)
T ss_pred CCCCe-----------eEeccccchheeEeecCCC-eEEEEEEcCCCCEEEE
Confidence 99998 8999999999999988775 4888889888876554
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=232.45 Aligned_cols=278 Identities=19% Similarity=0.248 Sum_probs=231.4
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+..+.-.||++.|+ |++..++||+.|..|-+|+..+.+-...... .++.+|..+
T Consensus 43 l~gh~geI~~~~F~-P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lk-------------------------gHsgAVM~l 96 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFH-PDGSCFASGGSDRAIVLWNVYGDCENFWVLK-------------------------GHSGAVMEL 96 (338)
T ss_pred cCCCcceEEEEEEC-CCCCeEeecCCcceEEEEeccccccceeeec-------------------------cccceeEee
Confidence 45667789999999 8999999999999999999765443322211 245678899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~ 189 (437)
.|.+ +++.+++++.|.+|+.||.+ .++..+.+++|..-|+.+.-+.-|..++.+|+.||+++|||+++ +.++.++
T Consensus 97 ~~~~-d~s~i~S~gtDk~v~~wD~~---tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~-k~~~~t~ 171 (338)
T KOG0265|consen 97 HGMR-DGSHILSCGTDKTVRGWDAE---TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK-KEAIKTF 171 (338)
T ss_pred eecc-CCCEEEEecCCceEEEEecc---cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc-cchhhcc
Confidence 9999 78899999999999999999 67888899999999999997777888899999999999999998 4446555
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
. .+.+++++.|..++.. +.+|+-|+.|++||++.. ..+..+.||.+.|+.+..+|+|. .+.+.
T Consensus 172 ~-~kyqltAv~f~d~s~q-v~sggIdn~ikvWd~r~~--------------d~~~~lsGh~DtIt~lsls~~gs-~llsn 234 (338)
T KOG0265|consen 172 E-NKYQLTAVGFKDTSDQ-VISGGIDNDIKVWDLRKN--------------DGLYTLSGHADTITGLSLSRYGS-FLLSN 234 (338)
T ss_pred c-cceeEEEEEecccccc-eeeccccCceeeeccccC--------------cceEEeecccCceeeEEeccCCC-ccccc
Confidence 4 4678999999999886 889999999999999886 34567899999999999999999 67799
Q ss_pred eCCCeEEEEeCCCCCCcee-eeeeecc----cCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 270 SEDNIMQEYCDSTDSDTKT-MRLDSIR----SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~~~~-~~~~~~~----~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
+.|.++++||++...+.+. +.....+ ......++|||+++.+.+|+.|.. +++||..+...+..
T Consensus 235 sMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~-----------vyvwd~~~r~~lyk 303 (338)
T KOG0265|consen 235 SMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRF-----------VYVWDTTSRRILYK 303 (338)
T ss_pred cccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccce-----------EEEeecccccEEEE
Confidence 9999999999987654433 2221111 123455699999999999999998 89999999889999
Q ss_pred hcCCCccccccCCCCCCccccc
Q psy4571 345 LLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 345 ~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.||...|.++.|+|....+.+
T Consensus 304 lpGh~gsvn~~~Fhp~e~iils 325 (338)
T KOG0265|consen 304 LPGHYGSVNEVDFHPTEPIILS 325 (338)
T ss_pred cCCcceeEEEeeecCCCcEEEE
Confidence 9999999999999998875554
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=266.60 Aligned_cols=238 Identities=20% Similarity=0.307 Sum_probs=211.7
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC----------------------------CCCCCeeeeccCCCCeEE
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH----------------------------NVSKPSHTVDAHTAEVNC 154 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~----------------------------~~~~~~~~~~~h~~~v~~ 154 (437)
...++|..|++ +..+||.|..|..|++|.+... ........+.+|.++|..
T Consensus 378 ~~~v~ca~fSd-dssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 378 YQGVTCAEFSD-DSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred CCcceeEeecC-CcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 45789999999 6779999999999999998731 012234557899999999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 234 (437)
..|+|+.++ |+++|+|+++|+|.+++... +..+.+|..||..+.|+|.|- .|||||.|++-++|.....
T Consensus 457 ~sFsPd~rf-LlScSED~svRLWsl~t~s~-~V~y~GH~~PVwdV~F~P~Gy-YFatas~D~tArLWs~d~~-------- 525 (707)
T KOG0263|consen 457 CSFSPDRRF-LLSCSEDSSVRLWSLDTWSC-LVIYKGHLAPVWDVQFAPRGY-YFATASHDQTARLWSTDHN-------- 525 (707)
T ss_pred eeecccccc-eeeccCCcceeeeeccccee-EEEecCCCcceeeEEecCCce-EEEecCCCceeeeeecccC--------
Confidence 999999996 99999999999999999555 888999999999999999996 4999999999999998875
Q ss_pred CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 235 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
.+++.+.+|-+.|.|+.|+|+.. ++++||.|.++++||+.+|..++.+.. |...+..++|||+|++|++|
T Consensus 526 ------~PlRifaghlsDV~cv~FHPNs~-Y~aTGSsD~tVRlWDv~~G~~VRiF~G---H~~~V~al~~Sp~Gr~LaSg 595 (707)
T KOG0263|consen 526 ------KPLRIFAGHLSDVDCVSFHPNSN-YVATGSSDRTVRLWDVSTGNSVRIFTG---HKGPVTALAFSPCGRYLASG 595 (707)
T ss_pred ------CchhhhcccccccceEEECCccc-ccccCCCCceEEEEEcCCCcEEEEecC---CCCceEEEEEcCCCceEeec
Confidence 34556889999999999999999 789999999999999999988877754 77888888999999999999
Q ss_pred CCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+.|+. |++||+.+|+.+..+.+|.+.+..+.|+.+|..++++ +|++..
T Consensus 596 ~ed~~-----------I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 596 DEDGL-----------IKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ccCCc-----------EEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 99999 8999999999999999999999999999999988876 898744
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=254.05 Aligned_cols=353 Identities=17% Similarity=0.231 Sum_probs=268.6
Q ss_pred cceeEEecCCcc--cccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeEEEe--
Q psy4571 20 NAFFTWSALPLS--HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANISCI-- 84 (437)
Q Consensus 20 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i~~~-- 84 (437)
++++.|+.+... ...-.|.+.+|+ +..++|++|-..|...++... ...+..+.++..+..++..
T Consensus 249 ~~~~~~k~~k~~ln~~~~kvtaa~fH-~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~ 327 (893)
T KOG0291|consen 249 HKIFWYKTKKHYLNQNSSKVTAAAFH-KGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS 327 (893)
T ss_pred cceEEEEEEeeeecccccceeeeecc-CCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC
Confidence 444444433322 224789999999 999999999999998888832 3556677777778888544
Q ss_pred cCceEEEEEeeecc----ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 85 LNISILFFEIIFTQ----NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 85 ~~~~i~~~~~~~~~----~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
.-|.+.+|+++... +..|...+++++++| ++.++|+|+.||.|+|||.. .+-++.++..|+..|+.+.|+..
T Consensus 328 klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~---SgfC~vTFteHts~Vt~v~f~~~ 403 (893)
T KOG0291|consen 328 KLGQLLVWEWQSESYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQ---SGFCFVTFTEHTSGVTAVQFTAR 403 (893)
T ss_pred ccceEEEEEeeccceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEecc---CceEEEEeccCCCceEEEEEEec
Confidence 45599999987543 345678999999999 78999999999999999998 66789999999999999999999
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCceeeeEeccC-CCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|. .+++++.||+|+.||+...+. .+++... .-...|++..|.|. ++++|+.|.. |.+|++.+++.
T Consensus 404 g~-~llssSLDGtVRAwDlkRYrN-fRTft~P~p~QfscvavD~sGe-lV~AG~~d~F~IfvWS~qTGql---------- 470 (893)
T KOG0291|consen 404 GN-VLLSSSLDGTVRAWDLKRYRN-FRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDSFEIFVWSVQTGQL---------- 470 (893)
T ss_pred CC-EEEEeecCCeEEeeeecccce-eeeecCCCceeeeEEEEcCCCC-EEEeeccceEEEEEEEeecCee----------
Confidence 99 599999999999999998665 6666532 23457888899998 6888888774 99999999854
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+-.+.||.++|.+++|+|++. .|+++|.|.+|++||+-... ...++. ....+..++|+|+|+-+++++-|
T Consensus 471 ----lDiLsGHEgPVs~l~f~~~~~-~LaS~SWDkTVRiW~if~s~~~vEtl~----i~sdvl~vsfrPdG~elaVaTld 541 (893)
T KOG0291|consen 471 ----LDILSGHEGPVSGLSFSPDGS-LLASGSWDKTVRIWDIFSSSGTVETLE----IRSDVLAVSFRPDGKELAVATLD 541 (893)
T ss_pred ----eehhcCCCCcceeeEEccccC-eEEeccccceEEEEEeeccCceeeeEe----eccceeEEEEcCCCCeEEEEEec
Confidence 445889999999999999999 89999999999999997543 333443 34668888999999999999999
Q ss_pred CcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccccccccCHHHHHHHHHhhhccccccccCCCCc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSY 397 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 397 (437)
|. |.+||...+.....+.|-.+......... .-..+.....+.|.++....+++
T Consensus 542 gq-----------Itf~d~~~~~q~~~IdgrkD~~~gR~~~D-----------~~ta~~sa~~K~Ftti~ySaDG~---- 595 (893)
T KOG0291|consen 542 GQ-----------ITFFDIKEAVQVGSIDGRKDLSGGRKETD-----------RITAENSAKGKTFTTICYSADGK---- 595 (893)
T ss_pred ce-----------EEEEEhhhceeeccccchhhccccccccc-----------eeehhhcccCCceEEEEEcCCCC----
Confidence 98 89999988887777766554222221100 00111122345677777665521
Q ss_pred ccccHHHHHHHHHhcCCChHhhhcccccCCcccceeeccC
Q psy4571 398 HLISGQVARKFFENSKLPVTELRKIWYPDSNKILSTWNVT 437 (437)
Q Consensus 398 ~~~~g~~~~~~~~~s~~p~~~~~~~w~~~~~~~~~~~~~~ 437 (437)
-++.|..++.+ .|.|.+.+-+|+.|.++
T Consensus 596 ~IlAgG~sn~i------------CiY~v~~~vllkkfqiS 623 (893)
T KOG0291|consen 596 CILAGGESNSI------------CIYDVPEGVLLKKFQIS 623 (893)
T ss_pred EEEecCCcccE------------EEEECchhheeeeEEec
Confidence 26666666655 47888888888888664
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=251.40 Aligned_cols=301 Identities=11% Similarity=0.162 Sum_probs=252.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCC-eEEEecCceEEEEEeee---
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVA-NISCILNISILFFEIIF--- 96 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~--- 96 (437)
...|.++.|+ .+.+.|++||.|.++|+|... ...+....|..... .++.+.||.+.+|....
T Consensus 145 fddi~si~Ws-~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~ 223 (893)
T KOG0291|consen 145 FDDITSIDWS-DDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPP 223 (893)
T ss_pred ccceeEEEec-cCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCc
Confidence 4458889999 999999999999999999943 34455555544443 44778999999997540
Q ss_pred --------------------ccc------------ccc---CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 97 --------------------TQN------------FPF---PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 97 --------------------~~~------------~~~---~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
+++ .-+ +..|++.+|++ .-++|++|-..|...+|.+. ....
T Consensus 224 ~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~-~t~~lvvgFssG~f~LyelP---~f~l 299 (893)
T KOG0291|consen 224 ELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHK-GTNLLVVGFSSGEFGLYELP---DFNL 299 (893)
T ss_pred ccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccC-CceEEEEEecCCeeEEEecC---CceE
Confidence 111 001 25789999999 78999999999999999998 5677
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v 220 (437)
++.+.-...+|..++|+..|.. ||.|+. =|.+.+|+.++.. .+....+|...+++++++|||+ ++|+|+.||+|+|
T Consensus 300 ih~LSis~~~I~t~~~N~tGDW-iA~g~~klgQLlVweWqsEs-YVlKQQgH~~~i~~l~YSpDgq-~iaTG~eDgKVKv 376 (893)
T KOG0291|consen 300 IHSLSISDQKILTVSFNSTGDW-IAFGCSKLGQLLVWEWQSES-YVLKQQGHSDRITSLAYSPDGQ-LIATGAEDGKVKV 376 (893)
T ss_pred EEEeecccceeeEEEecccCCE-EEEcCCccceEEEEEeeccc-eeeeccccccceeeEEECCCCc-EEEeccCCCcEEE
Confidence 8888777789999999999997 666654 5899999999844 4777889999999999999999 6999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
||...+ -++.++..|++.|+.+.|+..|+ .+++.+.||+|+.||+...+..+++..+. .....
T Consensus 377 Wn~~Sg--------------fC~vTFteHts~Vt~v~f~~~g~-~llssSLDGtVRAwDlkRYrNfRTft~P~--p~Qfs 439 (893)
T KOG0291|consen 377 WNTQSG--------------FCFVTFTEHTSGVTAVQFTARGN-VLLSSSLDGTVRAWDLKRYRNFRTFTSPE--PIQFS 439 (893)
T ss_pred EeccCc--------------eEEEEeccCCCceEEEEEEecCC-EEEEeecCCeEEeeeecccceeeeecCCC--ceeee
Confidence 999987 45667999999999999999999 78899999999999999998888887543 33445
Q ss_pred eeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccccc
Q psy4571 301 SSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSIW 369 (437)
Q Consensus 301 ~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~w 369 (437)
+++..|.|.++.+|+.|... |.+|++.||+++..+.||+.+|+.+.|+|+++.+++.-|
T Consensus 440 cvavD~sGelV~AG~~d~F~----------IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SW 498 (893)
T KOG0291|consen 440 CVAVDPSGELVCAGAQDSFE----------IFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSW 498 (893)
T ss_pred EEEEcCCCCEEEeeccceEE----------EEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccc
Confidence 56888999999999988765 999999999999999999999999999999998888733
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=230.39 Aligned_cols=241 Identities=20% Similarity=0.278 Sum_probs=205.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC--CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.++..|..++..+.+..++++++.|.++.+|++...+ .+.+.+.+.+|...|..+..+++|.+ .++++.|+++++||
T Consensus 13 gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~-alS~swD~~lrlWD 91 (315)
T KOG0279|consen 13 GHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNF-ALSASWDGTLRLWD 91 (315)
T ss_pred CCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCce-EEeccccceEEEEE
Confidence 3567788888888788999999999999999997542 34568899999999999999999996 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDF 256 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l 256 (437)
+.+++ +.+.+.+|...|.+++|+|+++. +++|+.|.+|++|++-... ..+.. .+.+.|+|+
T Consensus 92 l~~g~-~t~~f~GH~~dVlsva~s~dn~q-ivSGSrDkTiklwnt~g~c---------------k~t~~~~~~~~WVscv 154 (315)
T KOG0279|consen 92 LATGE-STRRFVGHTKDVLSVAFSTDNRQ-IVSGSRDKTIKLWNTLGVC---------------KYTIHEDSHREWVSCV 154 (315)
T ss_pred ecCCc-EEEEEEecCCceEEEEecCCCce-eecCCCcceeeeeeecccE---------------EEEEecCCCcCcEEEE
Confidence 99975 48899999999999999999985 8999999999999997743 22222 337899999
Q ss_pred EEccC--CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccc
Q psy4571 257 SWNPN--EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF 334 (437)
Q Consensus 257 ~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~w 334 (437)
.|+|. .+ ++++++.|+++++||+++.+....+.. +.+....+++||||.++++|+.|+. +.+|
T Consensus 155 rfsP~~~~p-~Ivs~s~DktvKvWnl~~~~l~~~~~g---h~~~v~t~~vSpDGslcasGgkdg~-----------~~Lw 219 (315)
T KOG0279|consen 155 RFSPNESNP-IIVSASWDKTVKVWNLRNCQLRTTFIG---HSGYVNTVTVSPDGSLCASGGKDGE-----------AMLW 219 (315)
T ss_pred EEcCCCCCc-EEEEccCCceEEEEccCCcchhhcccc---ccccEEEEEECCCCCEEecCCCCce-----------EEEE
Confidence 99998 45 899999999999999999877776664 5566777899999999999999999 7999
Q ss_pred cchhhhhhhhhcCCCccccccCCCCCCcccccc------ccccCHHH
Q psy4571 335 DILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS------IWSMTDEQ 375 (437)
Q Consensus 335 d~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~------~w~~~~~~ 375 (437)
|+..++.+..+ +|.+.+..++|+|+.-.++.. +|+...+.
T Consensus 220 dL~~~k~lysl-~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 220 DLNEGKNLYSL-EAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred EccCCceeEec-cCCCeEeeEEecCCceeEeeccCCceEEEeccchh
Confidence 99999886555 455689999999998766543 89985543
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=261.59 Aligned_cols=282 Identities=23% Similarity=0.292 Sum_probs=232.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.+....|.++.|+ +++..+++++.|+.+++|+...... .+.. ....+...|++++
T Consensus 156 ~~~~~sv~~~~fs-~~g~~l~~~~~~~~i~~~~~~~~~~-~~~~-----------------------~l~~h~~~v~~~~ 210 (456)
T KOG0266|consen 156 GHECPSVTCVDFS-PDGRALAAASSDGLIRIWKLEGIKS-NLLR-----------------------ELSGHTRGVSDVA 210 (456)
T ss_pred ccccCceEEEEEc-CCCCeEEEccCCCcEEEeecccccc-hhhc-----------------------cccccccceeeeE
Confidence 4457889999999 9999999999999999999754432 0000 0023557899999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++.++++++.|++|+|||+.. ....++++.+|...|++++|+|+++ ++++|+.|++|++||+++++. ...+.
T Consensus 211 fs~-d~~~l~s~s~D~tiriwd~~~--~~~~~~~l~gH~~~v~~~~f~p~g~-~i~Sgs~D~tvriWd~~~~~~-~~~l~ 285 (456)
T KOG0266|consen 211 FSP-DGSYLLSGSDDKTLRIWDLKD--DGRNLKTLKGHSTYVTSVAFSPDGN-LLVSGSDDGTVRIWDVRTGEC-VRKLK 285 (456)
T ss_pred ECC-CCcEEEEecCCceEEEeeccC--CCeEEEEecCCCCceEEEEecCCCC-EEEEecCCCcEEEEeccCCeE-EEeee
Confidence 999 678999999999999999942 4578899999999999999999995 799999999999999999554 88999
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc--cEEEEEEccCCCeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA--KISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~~p~~~~~l~s 268 (437)
+|..+|++++|++++. +|++++.|+.|++||+.++... ++..+.++.. .++++.|+|++. ++++
T Consensus 286 ~hs~~is~~~f~~d~~-~l~s~s~d~~i~vwd~~~~~~~------------~~~~~~~~~~~~~~~~~~fsp~~~-~ll~ 351 (456)
T KOG0266|consen 286 GHSDGISGLAFSPDGN-LLVSASYDGTIRVWDLETGSKL------------CLKLLSGAENSAPVTSVQFSPNGK-YLLS 351 (456)
T ss_pred ccCCceEEEEECCCCC-EEEEcCCCccEEEEECCCCcee------------eeecccCCCCCCceeEEEECCCCc-EEEE
Confidence 9999999999999998 5889999999999999997621 1122344444 599999999999 6779
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
++.|+.+++||+..+.....+...............++.|.++.+|+.|+. |.+||..++..+..+.+|
T Consensus 352 ~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~-----------v~~~~~~s~~~~~~l~~h 420 (456)
T KOG0266|consen 352 ASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGS-----------VYVWDSSSGGILQRLEGH 420 (456)
T ss_pred ecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCce-----------EEEEeCCccchhhhhcCC
Confidence 999999999999999888887764322112334456889999999999999 899999999999999999
Q ss_pred -CccccccCCCCCCcccccc
Q psy4571 349 -EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 349 -~~~~~~~~~~~~~~~~~~~ 367 (437)
...+....+++....++..
T Consensus 421 ~~~~~~~~~~~~~~~~~~s~ 440 (456)
T KOG0266|consen 421 SKAAVSDLSSHPTENLIASS 440 (456)
T ss_pred CCCceeccccCCCcCeeeec
Confidence 8888888888877765554
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=234.82 Aligned_cols=267 Identities=18% Similarity=0.251 Sum_probs=231.8
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeec---
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFT--- 97 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~--- 97 (437)
..+.|..+-|+ |+..+.++++.|.++++||. |+..+.++.+...+..+ +|+.|-.+++||...-
T Consensus 107 ~r~~vt~v~~h-p~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c 185 (406)
T KOG0295|consen 107 HRSSVTRVIFH-PSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRC 185 (406)
T ss_pred cccceeeeeec-cCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHH
Confidence 45567888888 99999999999999999994 45558888888777665 7888888999996542
Q ss_pred --cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 98 --QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 98 --~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
....+...|.+++|-| .++++++++.|.+|+.|++. .+..+.++.+|..-|.-++.+.||. ++++++.|.+|+
T Consensus 186 ~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~---tg~cv~t~~~h~ewvr~v~v~~DGt-i~As~s~dqtl~ 260 (406)
T KOG0295|consen 186 IKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECD---TGYCVKTFPGHSEWVRMVRVNQDGT-IIASCSNDQTLR 260 (406)
T ss_pred HHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecc---cceeEEeccCchHhEEEEEecCCee-EEEecCCCceEE
Confidence 2345678899999999 47899999999999999999 6789999999999999999999999 799999999999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCC----------C----CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPH----------N----ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~----------~----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
+|-+.+.+ +...++.|..+|.+++|.|. + ..++.+++.|++|++||+.++ .
T Consensus 261 vW~~~t~~-~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--------------~ 325 (406)
T KOG0295|consen 261 VWVVATKQ-CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--------------M 325 (406)
T ss_pred EEEeccch-hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--------------e
Confidence 99999954 47788999999999999874 1 136999999999999999996 6
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
+++++.+|...|..++|+|.|+ +|+++..|+++++||++++++.+.++. +.+-+.+..|..+.-++++|+-|.+++
T Consensus 326 cL~tL~ghdnwVr~~af~p~Gk-yi~ScaDDktlrvwdl~~~~cmk~~~a---h~hfvt~lDfh~~~p~VvTGsVdqt~K 401 (406)
T KOG0295|consen 326 CLFTLVGHDNWVRGVAFSPGGK-YILSCADDKTLRVWDLKNLQCMKTLEA---HEHFVTSLDFHKTAPYVVTGSVDQTVK 401 (406)
T ss_pred EEEEEecccceeeeeEEcCCCe-EEEEEecCCcEEEEEeccceeeeccCC---CcceeEEEecCCCCceEEeccccceee
Confidence 6788999999999999999999 788999999999999999999888874 566777889999999999999999965
Q ss_pred ccc
Q psy4571 322 VHE 324 (437)
Q Consensus 322 ~~~ 324 (437)
+|+
T Consensus 402 vwE 404 (406)
T KOG0295|consen 402 VWE 404 (406)
T ss_pred eee
Confidence 554
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=232.79 Aligned_cols=262 Identities=20% Similarity=0.264 Sum_probs=221.0
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------eeEEEecCCCCeE-EEecCceEEEEEeeecccc----
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------LYDLVVNNYVANI-SCILNISILFFEIIFTQNF---- 100 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~---- 100 (437)
|-|+++. |....++||+.|++++|||..++. +..++++....++ +|+.|+.|+.||+...+.+
T Consensus 154 Vr~vavd-P~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~Yh 232 (460)
T KOG0285|consen 154 VRSVAVD-PGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYH 232 (460)
T ss_pred EEEEeeC-CCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhc
Confidence 6788999 999999999999999999966544 5566666666666 7788999999999876644
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.+-.+|.|++.+| .-..|++|+.|.+++|||++ ....+..+.+|..+|..+.+.|.+.. +++|+.|++|++||++
T Consensus 233 GHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiR---tr~~V~~l~GH~~~V~~V~~~~~dpq-vit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 233 GHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIR---TRASVHVLSGHTNPVASVMCQPTDPQ-VITGSHDSTVRLWDLR 307 (460)
T ss_pred cccceeEEEeccc-cceeEEecCCcceEEEeeec---ccceEEEecCCCCcceeEEeecCCCc-eEEecCCceEEEeeec
Confidence 3567999999999 57899999999999999999 56789999999999999999998885 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.++. +.++..|+..|.+++.+|... .+|+++.| .|+-|++..+.... .+.+|+.-|++++.+.
T Consensus 308 agkt-~~tlt~hkksvral~lhP~e~-~fASas~d-nik~w~~p~g~f~~--------------nlsgh~~iintl~~ns 370 (460)
T KOG0285|consen 308 AGKT-MITLTHHKKSVRALCLHPKEN-LFASASPD-NIKQWKLPEGEFLQ--------------NLSGHNAIINTLSVNS 370 (460)
T ss_pred cCce-eEeeecccceeeEEecCCchh-hhhccCCc-cceeccCCccchhh--------------ccccccceeeeeeecc
Confidence 9777 778889999999999999986 58898876 68999998875443 3789999999999998
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeee-----eecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-----DSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
|| ++++|+.+|.+..||-+++...+.... ......++...+|...|..|++|..|.++++|
T Consensus 371 D~--v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~ 436 (460)
T KOG0285|consen 371 DG--VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMY 436 (460)
T ss_pred Cc--eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEE
Confidence 88 578999999999999999876655421 11122355667899999999999999995444
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=240.07 Aligned_cols=246 Identities=16% Similarity=0.281 Sum_probs=207.5
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeEEEecCce-----EEE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANISCILNIS-----ILF 91 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i~~~~~~~-----i~~ 91 (437)
...+.+.+.-..|+ |.|.++++|...|+||||+.. .|.+-++.|..++..+.+.++|. +.+
T Consensus 55 YtEH~~~vtVAkyS-PsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~ 133 (603)
T KOG0318|consen 55 YTEHAHQVTVAKYS-PSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL 133 (603)
T ss_pred eccccceeEEEEeC-CCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence 45557777778888 999999999999999999943 36688899999999999988874 666
Q ss_pred EEe--eeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 92 FEI--IFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 92 ~~~--~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
||. ..++...+...+++++|-|...-.+++|+.|++|.+|+-. ..+...++..|..-|.|+.|+|||.+ +++++
T Consensus 134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGP---PFKFk~s~r~HskFV~~VRysPDG~~-Fat~g 209 (603)
T KOG0318|consen 134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGP---PFKFKSSFREHSKFVNCVRYSPDGSR-FATAG 209 (603)
T ss_pred ecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCC---CeeeeecccccccceeeEEECCCCCe-EEEec
Confidence 773 2455566889999999999888899999999999999866 66777788899999999999999995 99999
Q ss_pred CCCeEEEEeCCCCceeeeEec---cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC------------
Q psy4571 170 ADKTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED------------ 234 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~------------ 234 (437)
.||.|.+||-.+++. +..+. +|++.|.+++|+||+.. ++|++.|.+++|||+.+.+...+...
T Consensus 210 sDgki~iyDGktge~-vg~l~~~~aHkGsIfalsWsPDs~~-~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~l 287 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEK-VGELEDSDAHKGSIFALSWSPDSTQ-FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCL 287 (603)
T ss_pred CCccEEEEcCCCccE-EEEecCCCCccccEEEEEECCCCce-EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEE
Confidence 999999999999776 77776 89999999999999996 89999999999999998766544321
Q ss_pred -----------------CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 235 -----------------AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 235 -----------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.....+..+..+.||...|+++..+|++. .|.+|+.||.|.-|+..++
T Consensus 288 Wqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~-~i~SgsyDG~I~~W~~~~g 352 (603)
T KOG0318|consen 288 WQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGK-TIYSGSYDGHINSWDSGSG 352 (603)
T ss_pred EeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCC-EEEeeccCceEEEEecCCc
Confidence 11122246677889999999999999998 7889999999999998754
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=242.14 Aligned_cols=250 Identities=58% Similarity=0.907 Sum_probs=217.7
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCC---------------------CceeEEEecCC--CCeEEEecCce
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT---------------------PFLYDLVVNNY--VANISCILNIS 88 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~---------------------~~~~~~~~~~~--~~~i~~~~~~~ 88 (437)
.+.-.|.++.+-+++..+++|++..+.+-||+... +.-+++.|+.. ...++++.|++
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 44556788888878899999999999999999321 11334444333 23457788999
Q ss_pred EEEEEeeeccc-----------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 89 ILFFEIIFTQN-----------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 89 i~~~~~~~~~~-----------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
|.+||+..... ..+...|++++|+|.+..+|++++.|+.+.|||+++. ..++.....+|.++|+|++|
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccCCceeEEEe
Confidence 99999764333 1256789999999999999999999999999999975 56777888899999999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+|-+.++||||+.|++|.|||+|+.+.++.++.+|...|.+|.|+|....+||+++.|+.+.|||+..-...+..+....
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877778889
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
+|+++++...||+..|..++|+|..++.+++.+.|+.+.||.+..
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 999999999999999999999999999999999999999999874
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=217.40 Aligned_cols=279 Identities=18% Similarity=0.254 Sum_probs=215.9
Q ss_pred cccccceeEEEEeeCCC-cceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPF-DDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~-~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
++-+.-++-.++++ |- |.+|+|++.|+.||+|+..++.-+... ..-.-.+++.|+.
T Consensus 10 ~~gh~~r~W~~awh-p~~g~ilAscg~Dk~vriw~~~~~~s~~ck----------------------~vld~~hkrsVRs 66 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWH-PGKGVILASCGTDKAVRIWSTSSGDSWTCK----------------------TVLDDGHKRSVRS 66 (312)
T ss_pred ecCCCCcEEEEEec-cCCceEEEeecCCceEEEEecCCCCcEEEE----------------------Eeccccchheeee
Confidence 44555588999999 66 889999999999999997642222111 0111136789999
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--eee
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK--LKL 186 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~--~~~ 186 (437)
++|+| .+++||+|+.|.++.||.-..+ ..+.+..+.+|+..|.|++|+++|.+ ||+++.|++|-+|...... .+.
T Consensus 67 vAwsp-~g~~La~aSFD~t~~Iw~k~~~-efecv~~lEGHEnEVK~Vaws~sG~~-LATCSRDKSVWiWe~deddEfec~ 143 (312)
T KOG0645|consen 67 VAWSP-HGRYLASASFDATVVIWKKEDG-EFECVATLEGHENEVKCVAWSASGNY-LATCSRDKSVWIWEIDEDDEFECI 143 (312)
T ss_pred eeecC-CCcEEEEeeccceEEEeecCCC-ceeEEeeeeccccceeEEEEcCCCCE-EEEeeCCCeEEEEEecCCCcEEEE
Confidence 99999 6889999999999999987755 46789999999999999999999996 9999999999999998433 456
Q ss_pred eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
..++.|...|..+.|+|... +|++++.|.+|++|+-... ....+++++.+|...|.+++|+|.|. .|
T Consensus 144 aVL~~HtqDVK~V~WHPt~d-lL~S~SYDnTIk~~~~~~d-----------ddW~c~~tl~g~~~TVW~~~F~~~G~-rl 210 (312)
T KOG0645|consen 144 AVLQEHTQDVKHVIWHPTED-LLFSCSYDNTIKVYRDEDD-----------DDWECVQTLDGHENTVWSLAFDNIGS-RL 210 (312)
T ss_pred eeeccccccccEEEEcCCcc-eeEEeccCCeEEEEeecCC-----------CCeeEEEEecCccceEEEEEecCCCc-eE
Confidence 78899999999999999887 7999999999999987632 23567888999999999999999998 68
Q ss_pred EEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 267 CSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 267 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
++++.|++++||-..+. ....+......++|. .-.+++++.|..+.++.....-.-..|++ ..+.-.
T Consensus 211 ~s~sdD~tv~Iw~~~~~-------~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l----~~~~~~ 277 (312)
T KOG0645|consen 211 VSCSDDGTVSIWRLYTD-------LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNL----LAKKEG 277 (312)
T ss_pred EEecCCcceEeeeeccC-------cchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHH----HHhhhc
Confidence 89999999999986632 122233445556776 56788999898866554431000011111 122336
Q ss_pred CCCccccccCCCCC
Q psy4571 347 GTEEESSDRHSSDN 360 (437)
Q Consensus 347 ~h~~~~~~~~~~~~ 360 (437)
.|+..++.+.+.|.
T Consensus 278 aHe~dVNsV~w~p~ 291 (312)
T KOG0645|consen 278 AHEVDVNSVQWNPK 291 (312)
T ss_pred ccccccceEEEcCC
Confidence 78889999999884
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=252.61 Aligned_cols=319 Identities=17% Similarity=0.205 Sum_probs=247.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCe---EEEecCceEEEEEeeeccc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVAN---ISCILNISILFFEIIFTQN 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~---i~~~~~~~i~~~~~~~~~~ 99 (437)
.-+|..++|+ |.+.++++|+.|+.+++||. +.|.+..+.|.++... .+...|+.+++||+.....
T Consensus 105 e~Pvi~ma~~-~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t 183 (775)
T KOG0319|consen 105 EAPVITMAFD-PTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT 183 (775)
T ss_pred CCCeEEEEEc-CCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch
Confidence 4457889999 88899999999999999993 4566777777666554 4666788999999774433
Q ss_pred -----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC-------------------------------------
Q psy4571 100 -----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN------------------------------------- 137 (437)
Q Consensus 100 -----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~------------------------------------- 137 (437)
..|.+.|++++|+++ +..+++++.|..+.|||+.+.+
T Consensus 184 cl~~~~~H~S~vtsL~~~~d-~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~ 262 (775)
T KOG0319|consen 184 CLHTMILHKSAVTSLAFSED-SLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVV 262 (775)
T ss_pred HHHHHHhhhhheeeeeeccC-CceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceE
Confidence 246677888888883 5555666666666666663210
Q ss_pred --------------------------------------------------------------------------------
Q psy4571 138 -------------------------------------------------------------------------------- 137 (437)
Q Consensus 138 -------------------------------------------------------------------------------- 137 (437)
T Consensus 263 ~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVA 342 (775)
T KOG0319|consen 263 QYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVA 342 (775)
T ss_pred EEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEE
Confidence
Q ss_pred -----------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---eeeeEeccCCCceEEEEEcC
Q psy4571 138 -----------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 138 -----------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---~~~~~~~~h~~~v~~v~~~p 203 (437)
.......+.+|+..|.++....+|- +|+||+.|.++++|.++.+. .++....+|.+.|.+++++.
T Consensus 343 TNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~-llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~ 421 (775)
T KOG0319|consen 343 TNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGD-LLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSK 421 (775)
T ss_pred eCCCceEEEecCCCceEEEeCchhheeeeeecccCc-EEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecc
Confidence 0011123467888999998555675 69999999999999885432 23556678999999999998
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.+..+|+++|.|+++++|++...+..... .....-.+...|...|++++.+|+.. +++|||.|.+.++|+++..
T Consensus 422 ~~asffvsvS~D~tlK~W~l~~s~~~~~~-----~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~le~~ 495 (775)
T KOG0319|consen 422 LGASFFVSVSQDCTLKLWDLPKSKETAFP-----IVLTCRYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWDLEQL 495 (775)
T ss_pred cCccEEEEecCCceEEEecCCCccccccc-----ceehhhHHHHhhcccccceEecCCCc-eEEecccccceeeecccCc
Confidence 88889999999999999999883322210 00011124568999999999999999 9999999999999999976
Q ss_pred CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 284 SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
....++.. |..++.++.|+|..+.++++|.|.+ +++|.+.++.+++++.||...|..+.|-.+|..
T Consensus 496 ~l~~vLsG---H~RGvw~V~Fs~~dq~laT~SgD~T-----------vKIW~is~fSClkT~eGH~~aVlra~F~~~~~q 561 (775)
T KOG0319|consen 496 RLLGVLSG---HTRGVWCVSFSKNDQLLATCSGDKT-----------VKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQ 561 (775)
T ss_pred eEEEEeeC---CccceEEEEeccccceeEeccCCce-----------EEEEEeccceeeeeecCccceeEeeeeeeCCcE
Confidence 66555554 7789999999999999999999999 899999999999999999999999999999988
Q ss_pred cccc-------ccccCHHH
Q psy4571 364 DLNS-------IWSMTDEQ 375 (437)
Q Consensus 364 ~~~~-------~w~~~~~~ 375 (437)
+.++ +|++...+
T Consensus 562 liS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 562 LISAGADGLIKLWNIKTNE 580 (775)
T ss_pred EEeccCCCcEEEEeccchh
Confidence 8776 99995433
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=222.89 Aligned_cols=254 Identities=17% Similarity=0.228 Sum_probs=206.1
Q ss_pred EEEecCceEEEEEeeecccc---cc-CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 81 ISCILNISILFFEIIFTQNF---PF-PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~~~---~~-~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
++++-|.+|++|+...+.+. ++ ...|+.+...| ++..||+++ .-.||+||+++.. ..++.++.+|...|+.+.
T Consensus 14 vsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp-dk~~LAaa~-~qhvRlyD~~S~n-p~Pv~t~e~h~kNVtaVg 90 (311)
T KOG0315|consen 14 VSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITP-DKKDLAAAG-NQHVRLYDLNSNN-PNPVATFEGHTKNVTAVG 90 (311)
T ss_pred EeccCcceeeeeehhcCeEEEEEecCccceeeEEEcC-Ccchhhhcc-CCeeEEEEccCCC-CCceeEEeccCCceEEEE
Confidence 47788999999998877654 34 35799999999 677887776 4579999999774 458999999999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
|..+|+. +++|++||+++|||++... ......|..+|+++..+|+... |++|..+|.|++||+....+...+
T Consensus 91 F~~dgrW-MyTgseDgt~kIWdlR~~~--~qR~~~~~spVn~vvlhpnQte-Lis~dqsg~irvWDl~~~~c~~~l---- 162 (311)
T KOG0315|consen 91 FQCDGRW-MYTGSEDGTVKIWDLRSLS--CQRNYQHNSPVNTVVLHPNQTE-LISGDQSGNIRVWDLGENSCTHEL---- 162 (311)
T ss_pred EeecCeE-EEecCCCceEEEEeccCcc--cchhccCCCCcceEEecCCcce-EEeecCCCcEEEEEccCCcccccc----
Confidence 9999996 9999999999999999843 3444468899999999998875 889999999999999987554432
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc---eeeeeeecccCCceeeeecCCCCcccc
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT---KTMRLDSIRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~s 313 (437)
.......|.++...|||. +++.+..-|.+++|++-+.... ..+.....+..-...+.+|||+++|++
T Consensus 163 ---------iPe~~~~i~sl~v~~dgs-ml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat 232 (311)
T KOG0315|consen 163 ---------IPEDDTSIQSLTVMPDGS-MLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLAT 232 (311)
T ss_pred ---------CCCCCcceeeEEEcCCCc-EEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEe
Confidence 223346899999999999 7888889999999999765332 222223335555677899999999999
Q ss_pred cCCCCcccccccccccccccccchhh-hhhhhhcCCCccccccCCCCCCccccc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVC-EEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++.|.+ +++|+..+- +....+.||..-+....||.+|..+.+
T Consensus 233 ~ssdkt-----------v~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvT 275 (311)
T KOG0315|consen 233 CSSDKT-----------VKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVT 275 (311)
T ss_pred ecCCce-----------EEEEecCCceeeEEEeecCCceEEeeeeccCccEEEe
Confidence 999999 788888776 666788999988999999999875443
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=220.59 Aligned_cols=266 Identities=20% Similarity=0.302 Sum_probs=213.0
Q ss_pred ceeEEEEeeCCCcceEEEee-------ccCceEeeecC-------------CCceeEEEecCCCCeE--EEecCceEEEE
Q psy4571 35 YRFYRLCVAEPFDDAVEERV-------INEEYKIWKKN-------------TPFLYDLVVNNYVANI--SCILNISILFF 92 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs-------~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i--~~~~~~~i~~~ 92 (437)
+.-|++.|++-.+++|+.+. ..|.+-|.+.. ...+++++|++..+.+ +|.+||++++|
T Consensus 9 f~GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~ 88 (311)
T KOG0277|consen 9 FHGYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLF 88 (311)
T ss_pred cccceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEe
Confidence 44566677743345544422 24455555542 2558899998777655 88999999999
Q ss_pred Eeeeccc-----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEE
Q psy4571 93 EIIFTQN-----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 93 ~~~~~~~-----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 167 (437)
|...... ..|...|.++.|++..+..+++++-||+|++|+.. ....+.++.+|...|...+|+|..+.++++
T Consensus 89 d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~---r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 89 DLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPN---RPNSVQTFNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred ccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCC---CCcceEeecCCccEEEEEecCCCCCCeEEE
Confidence 9553322 23677999999999989999999999999999998 677889999999999999999998889999
Q ss_pred EeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 168 gs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
+|.|+++++||++.....+ .+..|..++.++.|+.-++++++||+.|+.|++||+++.. .+++.+.
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-------------~pl~eL~ 231 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-------------TPLFELN 231 (311)
T ss_pred ccCCceEEEEEecCCCcee-EEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-------------ccceeec
Confidence 9999999999999876644 4889999999999999988899999999999999999865 3466789
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecC-CCCcccccCCCCcc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASP-TASSTASESPTPTN 320 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~ 320 (437)
+|.-.|+.+.|+|....+|++++.|-+++|||.+.+.. +.++. .|..-+..+.||+ ++..+|+.+-|..+
T Consensus 232 gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~---~HtEFv~g~Dws~~~~~~vAs~gWDe~l 303 (311)
T KOG0277|consen 232 GHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVD---HHTEFVCGLDWSLFDPGQVASTGWDELL 303 (311)
T ss_pred CCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhh---ccceEEeccccccccCceeeecccccce
Confidence 99999999999999988999999999999999985533 33332 1333344456665 56789999999883
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-31 Score=221.36 Aligned_cols=194 Identities=19% Similarity=0.292 Sum_probs=168.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~ 180 (437)
|...+.|+.|-+ +..|++++.|.+..+||++ .++.+..+.+|.+.|.+++++| ++. .+++|+.|+..+|||++
T Consensus 144 HtgylScC~f~d--D~~ilT~SGD~TCalWDie---~g~~~~~f~GH~gDV~slsl~p~~~n-tFvSg~cD~~aklWD~R 217 (343)
T KOG0286|consen 144 HTGYLSCCRFLD--DNHILTGSGDMTCALWDIE---TGQQTQVFHGHTGDVMSLSLSPSDGN-TFVSGGCDKSAKLWDVR 217 (343)
T ss_pred ccceeEEEEEcC--CCceEecCCCceEEEEEcc---cceEEEEecCCcccEEEEecCCCCCC-eEEecccccceeeeecc
Confidence 455677888986 5678899999999999999 6788999999999999999999 555 69999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.+. +.+++.+|...|++++|.|+|.. +++|+.|++.++||++..+.... +....-..+|++++|+.
T Consensus 218 ~~~-c~qtF~ghesDINsv~ffP~G~a-fatGSDD~tcRlyDlRaD~~~a~------------ys~~~~~~gitSv~FS~ 283 (343)
T KOG0286|consen 218 SGQ-CVQTFEGHESDINSVRFFPSGDA-FATGSDDATCRLYDLRADQELAV------------YSHDSIICGITSVAFSK 283 (343)
T ss_pred Ccc-eeEeecccccccceEEEccCCCe-eeecCCCceeEEEeecCCcEEee------------eccCcccCCceeEEEcc
Confidence 965 49999999999999999999984 99999999999999999765433 22333456899999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.|+ +|.+|..|..+.+||.-.++....+.. |.+.+..+..+|||..+++|+.|.+
T Consensus 284 SGR-lLfagy~d~~c~vWDtlk~e~vg~L~G---HeNRvScl~~s~DG~av~TgSWDs~ 338 (343)
T KOG0286|consen 284 SGR-LLFAGYDDFTCNVWDTLKGERVGVLAG---HENRVSCLGVSPDGMAVATGSWDST 338 (343)
T ss_pred ccc-EEEeeecCCceeEeeccccceEEEeec---cCCeeEEEEECCCCcEEEecchhHh
Confidence 999 888999999999999988877666654 6677888899999999999999998
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=233.44 Aligned_cols=236 Identities=19% Similarity=0.314 Sum_probs=210.8
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.|+++.| ++..|++|+.|++++|||+. .++...++.+|...|..+++|+-.+| ++++++|+.|+.||+..
T Consensus 150 HlgWVr~vavdP-~n~wf~tgs~DrtikIwDla---tg~LkltltGhi~~vr~vavS~rHpY-lFs~gedk~VKCwDLe~ 224 (460)
T KOG0285|consen 150 HLGWVRSVAVDP-GNEWFATGSADRTIKIWDLA---TGQLKLTLTGHIETVRGVAVSKRHPY-LFSAGEDKQVKCWDLEY 224 (460)
T ss_pred ccceEEEEeeCC-CceeEEecCCCceeEEEEcc---cCeEEEeecchhheeeeeeecccCce-EEEecCCCeeEEEechh
Confidence 345789999999 78999999999999999999 66778889999999999999999997 99999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. ++.+.+|-..|+|++.+|.-+ +|++|+.|.+++|||+++.. .+..+.||+.+|.++.+.|.
T Consensus 225 nkv-IR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRtr~--------------~V~~l~GH~~~V~~V~~~~~ 288 (460)
T KOG0285|consen 225 NKV-IRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRTRA--------------SVHVLSGHTNPVASVMCQPT 288 (460)
T ss_pred hhh-HHHhccccceeEEEeccccce-eEEecCCcceEEEeeecccc--------------eEEEecCCCCcceeEEeecC
Confidence 665 889999999999999999988 69999999999999999963 45678999999999999998
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.+ .+++|+.|++|++||++.|+....+.. +...+..++.+|.-..+|+++.|. |+-|++..|+.
T Consensus 289 dp-qvit~S~D~tvrlWDl~agkt~~tlt~---hkksvral~lhP~e~~fASas~dn------------ik~w~~p~g~f 352 (460)
T KOG0285|consen 289 DP-QVITGSHDSTVRLWDLRAGKTMITLTH---HKKSVRALCLHPKENLFASASPDN------------IKQWKLPEGEF 352 (460)
T ss_pred CC-ceEEecCCceEEEeeeccCceeEeeec---ccceeeEEecCCchhhhhccCCcc------------ceeccCCccch
Confidence 88 688999999999999999987666653 556777789999999999999997 79999999999
Q ss_pred hhhhcCCCccccccCCCCCCcccccc------ccccCHH
Q psy4571 342 QRQLLGTEEESSDRHSSDNDTEDLNS------IWSMTDE 374 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~~~~~~~~~~~~------~w~~~~~ 374 (437)
+..+.+|...+..+....||..+..+ +|++..+
T Consensus 353 ~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg 391 (460)
T KOG0285|consen 353 LQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSG 391 (460)
T ss_pred hhccccccceeeeeeeccCceEEEcCCceEEEEEecCcC
Confidence 99999999999999998888776654 7777543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-29 Score=263.43 Aligned_cols=278 Identities=21% Similarity=0.229 Sum_probs=216.8
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCC------------------CceeEEEecCC-CC-eEEEecCceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT------------------PFLYDLVVNNY-VA-NISCILNISIL 90 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~------------------~~~~~~~~~~~-~~-~i~~~~~~~i~ 90 (437)
..+...|.+++|+ |+++++++|+.|++|++|+... ..+..+.|.+. .. .+++..|+.|+
T Consensus 480 ~~~~~~V~~i~fs-~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~ 558 (793)
T PLN00181 480 LNSSNLVCAIGFD-RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQ 558 (793)
T ss_pred cCCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEE
Confidence 3356679999999 9999999999999999998532 22345556543 23 33677899999
Q ss_pred EEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEE
Q psy4571 91 FFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYIL 165 (437)
Q Consensus 91 ~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l 165 (437)
+||+...+. ..+...|.+++|+|.++.+|++|+.||+|++||+. ....+..+..+ ..|.++.|++ ++. .|
T Consensus 559 lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~---~~~~~~~~~~~-~~v~~v~~~~~~g~-~l 633 (793)
T PLN00181 559 VWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN---QGVSIGTIKTK-ANICCVQFPSESGR-SL 633 (793)
T ss_pred EEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC---CCcEEEEEecC-CCeEEEEEeCCCCC-EE
Confidence 999765442 24677899999998678899999999999999998 44556666544 5799999965 466 69
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++|+.||.|++||+++.+.+...+.+|...|.++.|. ++. .+++++.|++|++||++...... ....+..
T Consensus 634 atgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~-~lvs~s~D~~ikiWd~~~~~~~~--------~~~~l~~ 703 (793)
T PLN00181 634 AFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSS-TLVSSSTDNTLKLWDLSMSISGI--------NETPLHS 703 (793)
T ss_pred EEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCC-EEEEEECCCEEEEEeCCCCcccc--------CCcceEE
Confidence 9999999999999998665567788999999999997 555 58999999999999997642111 1244667
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee----------ecccCCceeeeecCCCCcccccC
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD----------SIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+.+|...+.+++|+|+++ ++++|+.|+.|++|+.....+...+... ..+...+..++|+|++..+++|+
T Consensus 704 ~~gh~~~i~~v~~s~~~~-~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~ 782 (793)
T PLN00181 704 FMGHTNVKNFVGLSVSDG-YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAAN 782 (793)
T ss_pred EcCCCCCeeEEEEcCCCC-EEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEec
Confidence 889999999999999998 8999999999999998766544333211 11122356779999999999999
Q ss_pred CCCcccccccccccccccccc
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~ 336 (437)
.+|. |++||+
T Consensus 783 ~dG~-----------I~i~~~ 792 (793)
T PLN00181 783 STGN-----------IKILEM 792 (793)
T ss_pred CCCc-----------EEEEec
Confidence 9999 677765
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=244.84 Aligned_cols=294 Identities=21% Similarity=0.297 Sum_probs=239.5
Q ss_pred hhhhhcccceeEEecCCcccc------cceeEEEEeeCCCcceEEEeeccCceEeeecC----------CCceeEEEecC
Q psy4571 13 LLLHLSQNAFFTWSALPLSHS------IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------TPFLYDLVVNN 76 (437)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------~~~~~~~~~~~ 76 (437)
++.....+-+|+|....+... ...|+.++|-.|+++.++.++..+.+|+++.+ +..+.++....
T Consensus 296 ~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~ 375 (775)
T KOG0319|consen 296 LLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWS 375 (775)
T ss_pred eEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecc
Confidence 344455566677744444432 44589999999999999999999999999844 44455555223
Q ss_pred CC-CeEEEecCceEEEEEeee--------ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC--Cee--
Q psy4571 77 YV-ANISCILNISILFFEIIF--------TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK--PSH-- 143 (437)
Q Consensus 77 ~~-~~i~~~~~~~i~~~~~~~--------~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~-- 143 (437)
.+ -..+|+.|.++++|.+.. .+-..|...|.+++++..+...|++++.|+++++|++....... ...
T Consensus 376 ~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~ 455 (775)
T KOG0319|consen 376 SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTC 455 (775)
T ss_pred cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehh
Confidence 33 234888999999997622 22334778999999998888899999999999999998522212 111
Q ss_pred --eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEE
Q psy4571 144 --TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221 (437)
Q Consensus 144 --~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vw 221 (437)
....|...|+|++.+|+.. ++||||.|++.+||++..... ..++.+|+.+|.++.|+|..+ +++|+|.|++|+||
T Consensus 456 ~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~le~~~l-~~vLsGH~RGvw~V~Fs~~dq-~laT~SgD~TvKIW 532 (775)
T KOG0319|consen 456 RYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWDLEQLRL-LGVLSGHTRGVWCVSFSKNDQ-LLATCSGDKTVKIW 532 (775)
T ss_pred hHHHHhhcccccceEecCCCc-eEEecccccceeeecccCceE-EEEeeCCccceEEEEeccccc-eeEeccCCceEEEE
Confidence 3357999999999999988 799999999999999997555 889999999999999999987 79999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCcee
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGIS 301 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (437)
.+.+..+ +.++.||+..|..++|-.+|. .|++++.||.+++|++.++.|+.++.. |...+..
T Consensus 533 ~is~fSC--------------lkT~eGH~~aVlra~F~~~~~-qliS~~adGliKlWnikt~eC~~tlD~---H~DrvWa 594 (775)
T KOG0319|consen 533 SISTFSC--------------LKTFEGHTSAVLRASFIRNGK-QLISAGADGLIKLWNIKTNECEMTLDA---HNDRVWA 594 (775)
T ss_pred Eecccee--------------eeeecCccceeEeeeeeeCCc-EEEeccCCCcEEEEeccchhhhhhhhh---ccceeEE
Confidence 9999754 555999999999999999999 788999999999999999999998875 6678888
Q ss_pred eeecCCCCcccccCCCCccccccccc
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNY 327 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~ 327 (437)
.+.+|.+..+++|+.|+.+.+|.+.+
T Consensus 595 L~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 595 LSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred EeecCccceeEecCCCeEEEEeecCc
Confidence 89999999999999999976665543
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=237.34 Aligned_cols=264 Identities=16% Similarity=0.160 Sum_probs=223.8
Q ss_pred CceeEEEecCCCCeE-EEecCceEEEEEeeec----cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 67 PFLYDLVVNNYVANI-SCILNISILFFEIIFT----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~----~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
..+..+.|.+.++.+ +++..|...+|+...- -...|..+|+++.|++ ++.++++|+.+|.|++|+.. ...
T Consensus 97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpn----mnn 171 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPN----MNN 171 (464)
T ss_pred cceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEcc-CCCEEEEcCCCceEEecccc----hhh
Confidence 457888899996655 7788999999996422 1235788999999999 79999999999999999987 344
Q ss_pred eeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE
Q psy4571 142 SHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220 (437)
Q Consensus 142 ~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v 220 (437)
++.+++|. ..|.+++|+|.... |++++.||+|+|||....+. ...+.+|.-.|.+++|+|... ++++||.|..|++
T Consensus 172 Vk~~~ahh~eaIRdlafSpnDsk-F~t~SdDg~ikiWdf~~~ke-e~vL~GHgwdVksvdWHP~kg-LiasgskDnlVKl 248 (464)
T KOG0284|consen 172 VKIIQAHHAEAIRDLAFSPNDSK-FLTCSDDGTIKIWDFRMPKE-ERVLRGHGWDVKSVDWHPTKG-LIASGSKDNLVKL 248 (464)
T ss_pred hHHhhHhhhhhhheeccCCCCce-eEEecCCCeEEEEeccCCch-hheeccCCCCcceeccCCccc-eeEEccCCceeEe
Confidence 55556555 89999999998885 99999999999999998665 667899999999999999987 7999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
||.+++.+..+ +.+|+..|..+.|+|+++ +|+|+|.|..++++|+++.+.++.++. |...+.
T Consensus 249 WDprSg~cl~t--------------lh~HKntVl~~~f~~n~N-~Llt~skD~~~kv~DiR~mkEl~~~r~---Hkkdv~ 310 (464)
T KOG0284|consen 249 WDPRSGSCLAT--------------LHGHKNTVLAVKFNPNGN-WLLTGSKDQSCKVFDIRTMKELFTYRG---HKKDVT 310 (464)
T ss_pred ecCCCcchhhh--------------hhhccceEEEEEEcCCCC-eeEEccCCceEEEEehhHhHHHHHhhc---chhhhe
Confidence 99999866554 789999999999999997 788999999999999998887777765 667888
Q ss_pred eeeecCCC-CcccccCCCCcccccccccccccccccchhhhhhhhh-cCCCccccccCCCCCCcccccc
Q psy4571 301 SSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL-LGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 301 ~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~-~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.++|+|-. .++.+|+.|+. +..|.+...+++..+ .+|...+..+.++|-|-.+++.
T Consensus 311 ~~~WhP~~~~lftsgg~Dgs-----------vvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tg 368 (464)
T KOG0284|consen 311 SLTWHPLNESLFTSGGSDGS-----------VVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATG 368 (464)
T ss_pred eeccccccccceeeccCCCc-----------eEEEeccccccccCCCcccccceeeeeccccceeEeec
Confidence 89999955 57888999998 778887755555555 8899999999999988877765
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-30 Score=232.22 Aligned_cols=301 Identities=14% Similarity=0.155 Sum_probs=207.1
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc----
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN---- 99 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~---- 99 (437)
.|.++.|-+.-+=+++|||.|++|-++. .|+.++.++.++|+++.+ +++.|+.+.+||-..++.
T Consensus 149 ~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l 228 (603)
T KOG0318|consen 149 RINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGEL 228 (603)
T ss_pred eEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEe
Confidence 3455555533344556666666665555 244555666665555544 455566666665443322
Q ss_pred ---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC---------------------------------------
Q psy4571 100 ---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--------------------------------------- 137 (437)
Q Consensus 100 ---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--------------------------------------- 137 (437)
.+|+.+|.+++|+| ++..|++++.|.+++|||+.+..
T Consensus 229 ~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~ 307 (603)
T KOG0318|consen 229 EDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNP 307 (603)
T ss_pred cCCCCccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecc
Confidence 23455566666666 45555566666666666654321
Q ss_pred -CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-------------------------------
Q psy4571 138 -VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK------------------------------- 185 (437)
Q Consensus 138 -~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~------------------------------- 185 (437)
...++..+.+|...|+++..+|++.+ |++|+.||.|.-||..++...
T Consensus 308 ~d~~~~~~i~GHnK~ITaLtv~~d~~~-i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l 386 (603)
T KOG0318|consen 308 SDPSVLKVISGHNKSITALTVSPDGKT-IYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTL 386 (603)
T ss_pred cCCChhheecccccceeEEEEcCCCCE-EEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeE
Confidence 33466778899999999999999986 999999999999998654210
Q ss_pred -----------------------------------------eeEeccC--------CCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 186 -----------------------------------------LHSFESH--------KDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 186 -----------------------------------------~~~~~~h--------~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
+..+..+ .....+++++|++.. ++.|+.|+
T Consensus 387 ~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~-vaVGG~Dg 465 (603)
T KOG0318|consen 387 RVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSE-VAVGGQDG 465 (603)
T ss_pred EEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCE-EEEecccc
Confidence 0000000 112367888999884 88999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 296 (437)
.|+||.+.......+ .....|.++|++++++||+. +|++|...+.+.+||+.+.+. ....+..|.
T Consensus 466 kvhvysl~g~~l~ee------------~~~~~h~a~iT~vaySpd~~-yla~~Da~rkvv~yd~~s~~~--~~~~w~FHt 530 (603)
T KOG0318|consen 466 KVHVYSLSGDELKEE------------AKLLEHRAAITDVAYSPDGA-YLAAGDASRKVVLYDVASREV--KTNRWAFHT 530 (603)
T ss_pred eEEEEEecCCcccce------------eeeecccCCceEEEECCCCc-EEEEeccCCcEEEEEcccCce--ecceeeeee
Confidence 999999988654332 33668999999999999999 899999999999999998766 333455577
Q ss_pred CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh-hhhcCCCccccccCCCCCCcccc
Q psy4571 297 NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ-RQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~-~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
..+.+++|+|+..++|+|+-|.. |.+|++...... ....+|...++.+.|-.+...+.
T Consensus 531 akI~~~aWsP~n~~vATGSlDt~-----------Viiysv~kP~~~i~iknAH~~gVn~v~wlde~tvvS 589 (603)
T KOG0318|consen 531 AKINCVAWSPNNKLVATGSLDTN-----------VIIYSVKKPAKHIIIKNAHLGGVNSVAWLDESTVVS 589 (603)
T ss_pred eeEEEEEeCCCceEEEeccccce-----------EEEEEccChhhheEeccccccCceeEEEecCceEEe
Confidence 77888899999999999999988 788888765443 33367888888887766655433
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-31 Score=242.80 Aligned_cols=261 Identities=19% Similarity=0.266 Sum_probs=222.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
..+..+|-++.|+ |.+..++++-.+|.|.||+.++..+..... -...+|++..
T Consensus 10 ~~rSdRVKsVd~H-PtePw~la~LynG~V~IWnyetqtmVksfe--------------------------V~~~PvRa~k 62 (794)
T KOG0276|consen 10 QSRSDRVKSVDFH-PTEPWILAALYNGDVQIWNYETQTMVKSFE--------------------------VSEVPVRAAK 62 (794)
T ss_pred hccCCceeeeecC-CCCceEEEeeecCeeEEEecccceeeeeee--------------------------ecccchhhhe
Confidence 3467889999999 999999999999999999987755443211 0125788888
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|-+ ..+.+++|+.|..|+||+.. +.+.+..+.+|...|.|++.+|..++ ++|+|.|-+|++||.+..-.+.+++.
T Consensus 63 fia-RknWiv~GsDD~~IrVfnyn---t~ekV~~FeAH~DyIR~iavHPt~P~-vLtsSDDm~iKlW~we~~wa~~qtfe 137 (794)
T KOG0276|consen 63 FIA-RKNWIVTGSDDMQIRVFNYN---TGEKVKTFEAHSDYIRSIAVHPTLPY-VLTSSDDMTIKLWDWENEWACEQTFE 137 (794)
T ss_pred eee-ccceEEEecCCceEEEEecc---cceeeEEeeccccceeeeeecCCCCe-EEecCCccEEEEeeccCceeeeeEEc
Confidence 888 68899999999999999999 67889999999999999999999997 99999999999999999777888999
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC--CeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~--~~~l~s 268 (437)
+|..-|.+++|+|.++.-+|+++.|++|+||.+.... +.+++++|...|+++.+-|.| + .|+|
T Consensus 138 GH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~--------------~nfTl~gHekGVN~Vdyy~~gdkp-ylIs 202 (794)
T KOG0276|consen 138 GHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH--------------PNFTLEGHEKGVNCVDYYTGGDKP-YLIS 202 (794)
T ss_pred CcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC--------------CceeeeccccCcceEEeccCCCcc-eEEe
Confidence 9999999999999887789999999999999998753 446689999999999998755 5 6789
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc--------cccccchhhh
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG--------LVLFDILVCE 340 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~--------i~~wd~~~~~ 340 (437)
|+.|.++++||.++..|++++.. |.+.+..+.|+|.=.++++|+.||++++|...+.+. =|+|++..++
T Consensus 203 gaDD~tiKvWDyQtk~CV~TLeG---Ht~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k 279 (794)
T KOG0276|consen 203 GADDLTIKVWDYQTKSCVQTLEG---HTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHK 279 (794)
T ss_pred cCCCceEEEeecchHHHHHHhhc---ccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecC
Confidence 99999999999999999999886 556677779999999999999999976665554332 4566665544
Q ss_pred h
Q psy4571 341 E 341 (437)
Q Consensus 341 ~ 341 (437)
-
T Consensus 280 ~ 280 (794)
T KOG0276|consen 280 G 280 (794)
T ss_pred C
Confidence 3
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=228.56 Aligned_cols=264 Identities=17% Similarity=0.195 Sum_probs=227.6
Q ss_pred eeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee
Q psy4571 69 LYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH 143 (437)
Q Consensus 69 ~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 143 (437)
+....+.|....+ +++.|.+|++||...++.. .+..++.+++|+. .+.++++++.|-.+.+||..+ ..+.++
T Consensus 111 vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a-~Gk~l~tcSsDl~~~LWd~~~--~~~c~k 187 (406)
T KOG0295|consen 111 VTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDA-SGKYLATCSSDLSAKLWDFDT--FFRCIK 187 (406)
T ss_pred eeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEec-CccEEEecCCccchhheeHHH--HHHHHH
Confidence 4455555555444 5567999999998776642 3667899999999 689999999999999999984 356788
Q ss_pred eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc
Q psy4571 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 144 ~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
.+.+|+..|.+++|-|.|.+ +++++.|.+|+.|++.++.. +.++.+|..-|..++.+.||. ++++++.|.+|++|-+
T Consensus 188 s~~gh~h~vS~V~f~P~gd~-ilS~srD~tik~We~~tg~c-v~t~~~h~ewvr~v~v~~DGt-i~As~s~dqtl~vW~~ 264 (406)
T KOG0295|consen 188 SLIGHEHGVSSVFFLPLGDH-ILSCSRDNTIKAWECDTGYC-VKTFPGHSEWVRMVRVNQDGT-IIASCSNDQTLRVWVV 264 (406)
T ss_pred HhcCcccceeeEEEEecCCe-eeecccccceeEEeccccee-EEeccCchHhEEEEEecCCee-EEEecCCCceEEEEEe
Confidence 88899999999999999996 99999999999999999665 999999999999999999997 8999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--------------CCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--------------EPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.+.++... +..|..+|.+++|.|. +..++.+++.|++|++||+.++.++.++
T Consensus 265 ~t~~~k~~--------------lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL 330 (406)
T KOG0295|consen 265 ATKQCKAE--------------LREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTL 330 (406)
T ss_pred ccchhhhh--------------hhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEE
Confidence 99866554 6789999999999763 1137889999999999999999998888
Q ss_pred eeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 290 RLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
.. +.+.+..++|+|.|++++++.+|++ +++||+.++++.+.+..|+..++.+.++.+-..+.+
T Consensus 331 ~g---hdnwVr~~af~p~Gkyi~ScaDDkt-----------lrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvT 393 (406)
T KOG0295|consen 331 VG---HDNWVRGVAFSPGGKYILSCADDKT-----------LRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVT 393 (406)
T ss_pred ec---ccceeeeeEEcCCCeEEEEEecCCc-----------EEEEEeccceeeeccCCCcceeEEEecCCCCceEEe
Confidence 75 5678888899999999999999999 899999999999999999999999988876654443
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-32 Score=231.41 Aligned_cols=265 Identities=17% Similarity=0.285 Sum_probs=209.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeEEEecCceEEEEEeeecccc-
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~- 100 (437)
.--+|||+.+. ++.+++|..|++|+||| .|+|.+..+-+... -.++.+.|.+|++||+..++.+
T Consensus 196 ~skgVYClQYD---D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~r-viisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD---DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDER-VIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEec---chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccce-EEEecCCCceEEEEeccCCchhh
Confidence 34578999887 67999999999999999 45677777755333 2346778999999999988764
Q ss_pred ---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 101 ---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
.+...|..+.|+ ++++++++.|.++.|||+.........+.+.||...|+.+.|+ .++ +++++.|.+|++|
T Consensus 272 tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~ky-IVsASgDRTikvW 345 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKY-IVSASGDRTIKVW 345 (499)
T ss_pred HHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cce-EEEecCCceEEEE
Confidence 467788899997 4689999999999999998665445567788999999999997 454 9999999999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
++.+.+. +.++.+|+.+|-|+.+. |+ ++++|+.|.+|++||+..+.+ ++.++||+.-|.++.
T Consensus 346 ~~st~ef-vRtl~gHkRGIAClQYr--~r-lvVSGSSDntIRlwdi~~G~c--------------LRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 346 STSTCEF-VRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGAC--------------LRVLEGHEELVRCIR 407 (499)
T ss_pred eccceee-ehhhhcccccceehhcc--Ce-EEEecCCCceEEEEeccccHH--------------HHHHhchHHhhhhee
Confidence 9999665 99999999999999884 55 799999999999999999754 455889999999999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeee----ee--ecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR----LD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
|. .+ .+++|+.||+|++||+.++...+... .. ..+.+.+..+.| |...+++.+.|.+ |
T Consensus 408 Fd--~k-rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddt-----------I 471 (499)
T KOG0281|consen 408 FD--NK-RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT-----------I 471 (499)
T ss_pred ec--Cc-eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCe-----------E
Confidence 94 44 68899999999999999875442211 10 112223333333 5567788888877 7
Q ss_pred ccccchhhhh
Q psy4571 332 VLFDILVCEE 341 (437)
Q Consensus 332 ~~wd~~~~~~ 341 (437)
-+||...+..
T Consensus 472 LiWdFl~~~~ 481 (499)
T KOG0281|consen 472 LIWDFLNGPP 481 (499)
T ss_pred EEEEcCCCCc
Confidence 8999877654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=213.88 Aligned_cols=255 Identities=23% Similarity=0.266 Sum_probs=211.7
Q ss_pred cCceEEEEEeeec------cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 85 LNISILFFEIIFT------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 85 ~~~~i~~~~~~~~------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+.|.+.|.+.... +.+.....+.+++|++..++.+++++.||++++||+.. ...++..++.|...|.++.|+
T Consensus 36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~--~s~Pi~~~kEH~~EV~Svdwn 113 (311)
T KOG0277|consen 36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTM--PSKPIHKFKEHKREVYSVDWN 113 (311)
T ss_pred cCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCC--CCcchhHHHhhhhheEEeccc
Confidence 6778888886422 23445778999999999999999999999999999653 457899999999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+..++.++++|.|++|++|+...+.. +.++.+|...|+..+|+|..+.+++++|.|+.+++||++......
T Consensus 114 ~~~r~~~ltsSWD~TiKLW~~~r~~S-v~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~-------- 184 (311)
T KOG0277|consen 114 TVRRRIFLTSSWDGTIKLWDPNRPNS-VQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFM-------- 184 (311)
T ss_pred cccceeEEeeccCCceEeecCCCCcc-eEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCcee--------
Confidence 98777899999999999999998665 889999999999999999988899999999999999998854322
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCC-cccccCC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTAS-STASESP 316 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~ 316 (437)
. +..|...+.++.|+.-..++++||+.|+.|+.||++..+. +.++ ..|...+..+.|||... .|++++.
T Consensus 185 -----~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL---~gh~~AVRkvk~Sph~~~lLaSasY 255 (311)
T KOG0277|consen 185 -----S-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL---NGHGLAVRKVKFSPHHASLLASASY 255 (311)
T ss_pred -----E-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee---cCCceEEEEEecCcchhhHhhhccc
Confidence 2 7789999999999998888999999999999999998653 2222 23556677789999764 8899999
Q ss_pred CCcccccccccccccccccchh-hhhhhhhcCCCccccccCCCCC-Cccccccccc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILV-CEEQRQLLGTEEESSDRHSSDN-DTEDLNSIWS 370 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~-~~~~~~~~~h~~~~~~~~~~~~-~~~~~~~~w~ 370 (437)
|-+ .++||... ...+.+..-|.+.+..+.+++. ...+++.-|+
T Consensus 256 DmT-----------~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWD 300 (311)
T KOG0277|consen 256 DMT-----------VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWD 300 (311)
T ss_pred cce-----------EEecccccchhhhhhhhccceEEeccccccccCceeeecccc
Confidence 988 79999884 4567888999999999998884 3445555444
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=210.60 Aligned_cols=272 Identities=16% Similarity=0.180 Sum_probs=224.6
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|.++.|+ .++++.+|++.|+++|+|+...+.+.... .+++ ..|.++
T Consensus 13 l~~~qgaV~avryN-~dGnY~ltcGsdrtvrLWNp~rg~liktY-sghG-------------------------~EVlD~ 65 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYN-VDGNYCLTCGSDRTVRLWNPLRGALIKTY-SGHG-------------------------HEVLDA 65 (307)
T ss_pred ecccccceEEEEEc-cCCCEEEEcCCCceEEeecccccceeeee-cCCC-------------------------ceeeec
Confidence 45556678889999 99999999999999999999888877653 3333 234455
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc-eeeeE
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK-LKLHS 188 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~-~~~~~ 188 (437)
+.+. ++..|++|+.|..+.+||+. +++.++.+.+|.+.|+.++|+.+.. ++++|+.|.++++||.++.. .|++.
T Consensus 66 ~~s~-Dnskf~s~GgDk~v~vwDV~---TGkv~Rr~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s~ePiQi 140 (307)
T KOG0316|consen 66 ALSS-DNSKFASCGGDKAVQVWDVN---TGKVDRRFRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRSFEPIQI 140 (307)
T ss_pred cccc-cccccccCCCCceEEEEEcc---cCeeeeecccccceeeEEEecCcce-EEEeccccceeEEEEcccCCCCccch
Confidence 6665 57789999999999999999 6788999999999999999999888 79999999999999998743 46778
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+....+.|.++..+. +.+++|+.||+++.||++.+..... .- ..+|++++|+++++ ....
T Consensus 141 ldea~D~V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sD--------------y~--g~pit~vs~s~d~n-c~La 200 (307)
T KOG0316|consen 141 LDEAKDGVSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSD--------------YF--GHPITSVSFSKDGN-CSLA 200 (307)
T ss_pred hhhhcCceeEEEecc---cEEEeeccCCcEEEEEeecceeehh--------------hc--CCcceeEEecCCCC-EEEE
Confidence 888889999999864 2588999999999999999864332 22 34899999999999 6668
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
++.|+++++.|-++|+.++.+..+. ...--..++++.....+++|+.||. +.+||+..+..+..+..+
T Consensus 201 ~~l~stlrLlDk~tGklL~sYkGhk-n~eykldc~l~qsdthV~sgSEDG~-----------Vy~wdLvd~~~~sk~~~~ 268 (307)
T KOG0316|consen 201 SSLDSTLRLLDKETGKLLKSYKGHK-NMEYKLDCCLNQSDTHVFSGSEDGK-----------VYFWDLVDETQISKLSVV 268 (307)
T ss_pred eeccceeeecccchhHHHHHhcccc-cceeeeeeeecccceeEEeccCCce-----------EEEEEeccceeeeeeccC
Confidence 9999999999999999999887643 2223445578888899999999999 899999999999999888
Q ss_pred Ccc-ccccCCCCCCcccc
Q psy4571 349 EEE-SSDRHSSDNDTEDL 365 (437)
Q Consensus 349 ~~~-~~~~~~~~~~~~~~ 365 (437)
... +..+.++|.-..+.
T Consensus 269 ~~v~v~dl~~hp~~~~f~ 286 (307)
T KOG0316|consen 269 STVIVTDLSCHPTMDDFI 286 (307)
T ss_pred CceeEEeeecccCcccee
Confidence 776 77788888655433
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=218.60 Aligned_cols=256 Identities=18% Similarity=0.250 Sum_probs=208.0
Q ss_pred cceEEEeeccCceEeeec----------CCCceeEEEec-CCC---CeEEEecCceEEEEEeeeccc--------cccCC
Q psy4571 47 DDAVEERVINEEYKIWKK----------NTPFLYDLVVN-NYV---ANISCILNISILFFEIIFTQN--------FPFPL 104 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~-~~~---~~i~~~~~~~i~~~~~~~~~~--------~~~~~ 104 (437)
++.|+||+.||++|+|+. |++.+.+.++. ... ..++++.|.++++|....+.. ..|..
T Consensus 115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~ 194 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKR 194 (423)
T ss_pred CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccc
Confidence 688999999999999994 45556555552 222 366888999999998765432 25788
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCC----------------------CCCCCeeeeccCCCCeEEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSH----------------------NVSKPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~----------------------~~~~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
+|.+++..+ ++..+++|+.|.+|.+|+.... ....++..+.+|..+|.++.|++ ..
T Consensus 195 ~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~ 272 (423)
T KOG0313|consen 195 SVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-AT 272 (423)
T ss_pred ceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CC
Confidence 999999999 7899999999999999993221 12456778899999999999998 44
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
.+++++.|.+|+.||+.+++. ...+. .....++++.+|..+ +|++|+.|..|++||.+++... ..
T Consensus 273 -v~yS~SwDHTIk~WDletg~~-~~~~~-~~ksl~~i~~~~~~~-Ll~~gssdr~irl~DPR~~~gs-----------~v 337 (423)
T KOG0313|consen 273 -VIYSVSWDHTIKVWDLETGGL-KSTLT-TNKSLNCISYSPLSK-LLASGSSDRHIRLWDPRTGDGS-----------VV 337 (423)
T ss_pred -ceEeecccceEEEEEeecccc-eeeee-cCcceeEeecccccc-eeeecCCCCceeecCCCCCCCc-----------ee
Confidence 499999999999999999776 44444 467899999999887 7999999999999999987532 23
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.+.+.+|++.|.++.|+|...++|++|+.|+++++||+++.+ ++..+.. |...+.++.|. ++..+++|+.|.+++
T Consensus 338 ~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~---h~DKvl~vdW~-~~~~IvSGGaD~~l~ 413 (423)
T KOG0313|consen 338 SQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG---HNDKVLSVDWN-EGGLIVSGGADNKLR 413 (423)
T ss_pred EEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc---CCceEEEEecc-CCceEEeccCcceEE
Confidence 467899999999999999999999999999999999999887 6666654 45666677774 577899999999855
Q ss_pred cc
Q psy4571 322 VH 323 (437)
Q Consensus 322 ~~ 323 (437)
++
T Consensus 414 i~ 415 (423)
T KOG0313|consen 414 IF 415 (423)
T ss_pred Ee
Confidence 44
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=246.14 Aligned_cols=241 Identities=22% Similarity=0.314 Sum_probs=201.7
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+|.++.|+| ++..+++++.++.+++|+...... .....+.+|...|.+++|+|++.+ +++|+.|++|++||+..
T Consensus 158 ~~~sv~~~~fs~-~g~~l~~~~~~~~i~~~~~~~~~~-~~~~~l~~h~~~v~~~~fs~d~~~-l~s~s~D~tiriwd~~~ 234 (456)
T KOG0266|consen 158 ECPSVTCVDFSP-DGRALAAASSDGLIRIWKLEGIKS-NLLRELSGHTRGVSDVAFSPDGSY-LLSGSDDKTLRIWDLKD 234 (456)
T ss_pred ccCceEEEEEcC-CCCeEEEccCCCcEEEeecccccc-hhhccccccccceeeeEECCCCcE-EEEecCCceEEEeeccC
Confidence 367899999999 677899999999999999963321 256666899999999999999995 99999999999999966
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
....+.++.+|...|++++|+|+++ ++++|+.|++|+|||+++++ ++..+.+|.+.|++++|+++
T Consensus 235 ~~~~~~~l~gH~~~v~~~~f~p~g~-~i~Sgs~D~tvriWd~~~~~--------------~~~~l~~hs~~is~~~f~~d 299 (456)
T KOG0266|consen 235 DGRNLKTLKGHSTYVTSVAFSPDGN-LLVSGSDDGTVRIWDVRTGE--------------CVRKLKGHSDGISGLAFSPD 299 (456)
T ss_pred CCeEEEEecCCCCceEEEEecCCCC-EEEEecCCCcEEEEeccCCe--------------EEEeeeccCCceEEEEECCC
Confidence 5566899999999999999999995 79999999999999999864 45568999999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCC--CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDS--DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+. ++++++.|+.|++||+.++. +...+....... ....+.|+|+|.+++++..|+. +++||+..+
T Consensus 300 ~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~-----------~~~w~l~~~ 366 (456)
T KOG0266|consen 300 GN-LLVSASYDGTIRVWDLETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRT-----------LKLWDLRSG 366 (456)
T ss_pred CC-EEEEcCCCccEEEEECCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCe-----------EEEEEccCC
Confidence 99 78899999999999999998 445554433222 4677799999999999999998 899999999
Q ss_pred hhhhhhcCCCcccc---ccCCCCCCcccccc-------ccccCH
Q psy4571 340 EEQRQLLGTEEESS---DRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 340 ~~~~~~~~h~~~~~---~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
.....+.+|..... ....++++..+.+. +|+...
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s 410 (456)
T KOG0266|consen 367 KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSS 410 (456)
T ss_pred cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCc
Confidence 99999999987532 22345566655543 888854
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=223.56 Aligned_cols=263 Identities=24% Similarity=0.313 Sum_probs=214.2
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
+.+.-.|.+++|+ |+++++++++.|+.+++|+..+ ..+..+.+.+....+ ++..++.+.+|+....+
T Consensus 6 ~~h~~~i~~~~~~-~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~ 84 (289)
T cd00200 6 KGHTGGVTCVAFS-PDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE 84 (289)
T ss_pred cccCCCEEEEEEc-CCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc
Confidence 3445779999999 9999999999999999999543 334466677766555 55669999999987533
Q ss_pred cc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 99 NF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 99 ~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
.. .+...+.++.|+| ++.++++++.+|.|.+||+. ..+....+..|...+.+++|+|++. ++++++.|+.|
T Consensus 85 ~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i 159 (289)
T cd00200 85 CVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVE---TGKCLTTLRGHTDWVNSVAFSPDGT-FVASSSQDGTI 159 (289)
T ss_pred ceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECC---CcEEEEEeccCCCcEEEEEEcCcCC-EEEEEcCCCcE
Confidence 21 2445799999999 47788888889999999998 4566777778999999999999977 48888889999
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
++||+++++. ...+..|...+.+++|+|+++. +++++.|+.|++||++..... ..+..|...+.
T Consensus 160 ~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~i~i~d~~~~~~~--------------~~~~~~~~~i~ 223 (289)
T cd00200 160 KLWDLRTGKC-VATLTGHTGEVNSVAFSPDGEK-LLSSSSDGTIKLWDLSTGKCL--------------GTLRGHENGVN 223 (289)
T ss_pred EEEEcccccc-ceeEecCccccceEEECCCcCE-EEEecCCCcEEEEECCCCcee--------------cchhhcCCceE
Confidence 9999997554 6777788889999999999975 777888999999999875433 33557888999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
++.|+|++. ++++++.||.+++||+.+++....+. .+...+..++|+|++..+++++.|+.
T Consensus 224 ~~~~~~~~~-~~~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~ 284 (289)
T cd00200 224 SVAFSPDGY-LLASGSEDGTIRVWDLRTGECVQTLS---GHTNSVTSLAWSPDGKRLASGSADGT 284 (289)
T ss_pred EEEEcCCCc-EEEEEcCCCcEEEEEcCCceeEEEcc---ccCCcEEEEEECCCCCEEEEecCCCe
Confidence 999999976 78788889999999999887766665 24456777899999999999999998
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=242.58 Aligned_cols=284 Identities=16% Similarity=0.224 Sum_probs=225.7
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
+|-.++|+ |....|+++-..|.|++||..=+.+..- --.|..+|..++|+| .
T Consensus 11 RvKglsFH-P~rPwILtslHsG~IQlWDYRM~tli~r--------------------------FdeHdGpVRgv~FH~-~ 62 (1202)
T KOG0292|consen 11 RVKGLSFH-PKRPWILTSLHSGVIQLWDYRMGTLIDR--------------------------FDEHDGPVRGVDFHP-T 62 (1202)
T ss_pred cccceecC-CCCCEEEEeecCceeeeehhhhhhHHhh--------------------------hhccCCccceeeecC-C
Confidence 44456666 6666666666666666666433322211 123567899999999 6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
..+|++|+.|-.|+||+.+ ..+++.++.+|-..|..+.|++.-+. |+|+|.|.+|+||+.++.+. +..+.+|..-
T Consensus 63 qplFVSGGDDykIkVWnYk---~rrclftL~GHlDYVRt~~FHheyPW-IlSASDDQTIrIWNwqsr~~-iavltGHnHY 137 (1202)
T KOG0292|consen 63 QPLFVSGGDDYKIKVWNYK---TRRCLFTLLGHLDYVRTVFFHHEYPW-ILSASDDQTIRIWNWQSRKC-IAVLTGHNHY 137 (1202)
T ss_pred CCeEEecCCccEEEEEecc---cceehhhhccccceeEEeeccCCCce-EEEccCCCeEEEEeccCCce-EEEEecCceE
Confidence 8899999999999999999 67889999999999999999999997 99999999999999999554 9999999999
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC------------CCCC---CCceEEEecCccccEEEEEEcc
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED------------AEDG---PPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~------------~~~~---~~~~~~~~~~h~~~v~~l~~~p 260 (437)
|.|..|+|... +++++|.|.+|||||+........... .... .....+.++||+..|+-++|+|
T Consensus 138 VMcAqFhptED-lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp 216 (1202)
T KOG0292|consen 138 VMCAQFHPTED-LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP 216 (1202)
T ss_pred EEeeccCCccc-eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecC
Confidence 99999999887 799999999999999976544332221 0000 1233467899999999999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
.-+ ++++|+.|..|++|.++..+. ........|.+.+.++.|+|...++.+.+.|++ |++||+...+
T Consensus 217 Tlp-liVSG~DDRqVKlWrmnetKa-WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDks-----------irVwDm~kRt 283 (1202)
T KOG0292|consen 217 TLP-LIVSGADDRQVKLWRMNETKA-WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKS-----------IRVWDMTKRT 283 (1202)
T ss_pred Ccc-eEEecCCcceeeEEEeccccc-eeehhhhcccCCcceEEecCccceeEecCCCcc-----------EEEEeccccc
Confidence 999 999999999999999876533 344445557778888899999999999999999 8999998888
Q ss_pred hhhhhcCCCccccccCCCCCCccccc
Q psy4571 341 EQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 341 ~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
.++++..-.+.-..++.+|..+.++.
T Consensus 284 ~v~tfrrendRFW~laahP~lNLfAA 309 (1202)
T KOG0292|consen 284 SVQTFRRENDRFWILAAHPELNLFAA 309 (1202)
T ss_pred ceeeeeccCCeEEEEEecCCcceeee
Confidence 88888666667777777776665544
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=218.02 Aligned_cols=307 Identities=11% Similarity=0.126 Sum_probs=242.3
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------eeEEEecCCCCeE-EEecCceEEEEEeee
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------LYDLVVNNYVANI-SCILNISILFFEIIF 96 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------~~~~~~~~~~~~i-~~~~~~~i~~~~~~~ 96 (437)
.+..+.-.|++++.+ |+.++++||+.|...-+|+.+++. +....|+.++.++ +..-+|.|++|+...
T Consensus 59 tF~~H~~svFavsl~-P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 59 TFDKHTDSVFAVSLH-PNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred ehhhcCCceEEEEeC-CCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 346777889999999 899999999999999999965543 6666677777666 344678999999876
Q ss_pred cccc-ccC---CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 97 TQNF-PFP---LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 97 ~~~~-~~~---~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
+... .+. ..+.=+.|+| ...+|++|+.||.+.+|.+. .....+.+.+|..++++-.|.|+|++ ++++..||
T Consensus 138 g~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip---~~~~~kv~~Gh~~~ct~G~f~pdGKr-~~tgy~dg 212 (399)
T KOG0296|consen 138 GGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIP---SQALCKVMSGHNSPCTCGEFIPDGKR-ILTGYDDG 212 (399)
T ss_pred CceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECC---CcceeeEecCCCCCcccccccCCCce-EEEEecCc
Confidence 5432 332 3455577899 68899999999999999998 44778889999999999999999996 99999999
Q ss_pred eEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 173 TVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
+|++||+.++.. +..+. .-..+..++.++..+. .+++|+.++.+++-+..+++.+..... ..+.+ ...+..
T Consensus 213 ti~~Wn~ktg~p-~~~~~~~e~~~~~~~~~~~~~~-~~~~g~~e~~~~~~~~~sgKVv~~~n~---~~~~l---~~~~e~ 284 (399)
T KOG0296|consen 213 TIIVWNPKTGQP-LHKITQAEGLELPCISLNLAGS-TLTKGNSEGVACGVNNGSGKVVNCNNG---TVPEL---KPSQEE 284 (399)
T ss_pred eEEEEecCCCce-eEEecccccCcCCccccccccc-eeEeccCCccEEEEccccceEEEecCC---CCccc---cccchh
Confidence 999999999765 55554 2345678899988887 588999999999888877764433221 00111 123343
Q ss_pred c---EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 252 K---ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 252 ~---v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
. |..+.|+..-+ ++|+|+.||+|.|||+...+...... +..+++.+.|-+ ..+|++++.++.
T Consensus 285 ~~esve~~~~ss~lp-L~A~G~vdG~i~iyD~a~~~~R~~c~----he~~V~~l~w~~-t~~l~t~c~~g~--------- 349 (399)
T KOG0296|consen 285 LDESVESIPSSSKLP-LAACGSVDGTIAIYDLAASTLRHICE----HEDGVTKLKWLN-TDYLLTACANGK--------- 349 (399)
T ss_pred hhhhhhhcccccccc-hhhcccccceEEEEecccchhheecc----CCCceEEEEEcC-cchheeeccCce---------
Confidence 4 44455555667 89999999999999999876555444 667899999988 889999999999
Q ss_pred cccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 329 QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++.||.++|+++..+.||...+.+...+|+.+.+.+
T Consensus 350 --v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT 385 (399)
T KOG0296|consen 350 --VRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVT 385 (399)
T ss_pred --EEeeeccccceEEEEecCchheeEEEEcCCCcEEEE
Confidence 899999999999999999999999999998886654
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=221.00 Aligned_cols=281 Identities=15% Similarity=0.178 Sum_probs=236.5
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.+.|..|+ |++.++++||.||-+.+|+.-+|++..-. .+.+ + ..-+.+..+|.|+.|+. +
T Consensus 215 h~EcA~FS-PDgqyLvsgSvDGFiEVWny~~GKlrKDL-----kYQA---q----------d~fMMmd~aVlci~FSR-D 274 (508)
T KOG0275|consen 215 HVECARFS-PDGQYLVSGSVDGFIEVWNYTTGKLRKDL-----KYQA---Q----------DNFMMMDDAVLCISFSR-D 274 (508)
T ss_pred chhheeeC-CCCceEeeccccceeeeehhccchhhhhh-----hhhh---h----------cceeecccceEEEeecc-c
Confidence 36778899 99999999999999999998777764221 1100 0 11123557899999999 6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
..++|+|+.||.|+||.++ ++.+++.+. +|+..|+|+.|+.|+.. +++++.|.++++.-+++++. +..+++|..
T Consensus 275 sEMlAsGsqDGkIKvWri~---tG~ClRrFdrAHtkGvt~l~FSrD~Sq-iLS~sfD~tvRiHGlKSGK~-LKEfrGHsS 349 (508)
T KOG0275|consen 275 SEMLASGSQDGKIKVWRIE---TGQCLRRFDRAHTKGVTCLSFSRDNSQ-ILSASFDQTVRIHGLKSGKC-LKEFRGHSS 349 (508)
T ss_pred HHHhhccCcCCcEEEEEEe---cchHHHHhhhhhccCeeEEEEccCcch-hhcccccceEEEeccccchh-HHHhcCccc
Confidence 8899999999999999999 566777776 89999999999999996 99999999999999999776 889999999
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
-|+...|.++|.+ +++++.||+|++|+..+..+..+. ...+...+|.++..-|..+.-++.|...++
T Consensus 350 yvn~a~ft~dG~~-iisaSsDgtvkvW~~KtteC~~Tf------------k~~~~d~~vnsv~~~PKnpeh~iVCNrsnt 416 (508)
T KOG0275|consen 350 YVNEATFTDDGHH-IISASSDGTVKVWHGKTTECLSTF------------KPLGTDYPVNSVILLPKNPEHFIVCNRSNT 416 (508)
T ss_pred cccceEEcCCCCe-EEEecCCccEEEecCcchhhhhhc------------cCCCCcccceeEEEcCCCCceEEEEcCCCe
Confidence 9999999999996 889999999999999998877662 233456789999998888767888889999
Q ss_pred EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccc
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSD 354 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~ 354 (437)
+++-++. |+.++.+.......+..+.++.||.|.++...+.|+. ++.+...+|++.+++.-|+..+..
T Consensus 417 v~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~v-----------lYCF~~~sG~LE~tl~VhEkdvIG 484 (508)
T KOG0275|consen 417 VYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGV-----------LYCFSVLSGKLERTLPVHEKDVIG 484 (508)
T ss_pred EEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcE-----------EEEEEeecCceeeeeecccccccc
Confidence 9999987 4566677655555666788899999999999999998 799999999999999999999999
Q ss_pred cCCCCCCccccc
Q psy4571 355 RHSSDNDTEDLN 366 (437)
Q Consensus 355 ~~~~~~~~~~~~ 366 (437)
+..+|+.+.+++
T Consensus 485 l~HHPHqNllAs 496 (508)
T KOG0275|consen 485 LTHHPHQNLLAS 496 (508)
T ss_pred cccCcccchhhh
Confidence 999998876654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=222.55 Aligned_cols=288 Identities=17% Similarity=0.247 Sum_probs=227.3
Q ss_pred hhhhhhhcccceeEEecCCcccccceeEEEEeeCCCc-ceEEEeeccCceEeeec-----------CCCceeEEEecCCC
Q psy4571 11 PKLLLHLSQNAFFTWSALPLSHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYV 78 (437)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~ 78 (437)
.+|........+ -.+..+..+|+|++-+ |.. ..+++|+.||.|++|+. |.|.+.++.... .
T Consensus 48 tKleR~fakPFv-----~~L~gHrdGV~~lakh-p~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~ 120 (433)
T KOG0268|consen 48 TKLERVFAKPFV-----GSLDGHRDGVSCLAKH-PNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-T 120 (433)
T ss_pred HHHHHHhhccch-----hhccccccccchhhcC-cchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-c
Confidence 345444555544 4467889999999999 655 89999999999999993 557788888766 6
Q ss_pred CeEEEecCceEEEEEeeec--cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 79 ANISCILNISILFFEIIFT--QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 79 ~~i~~~~~~~i~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
..++|+.|.+|+.|..... ..+.-...+..+.-+. .++.+++++. .|.|||.+ ...++..+......|.++.
T Consensus 121 ~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~---R~~Pv~smswG~Dti~svk 194 (433)
T KOG0268|consen 121 SFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHR-KNSVFATCGE--QIDIWDEQ---RDNPVSSMSWGADSISSVK 194 (433)
T ss_pred ceEEecCCcceeeeeccCCcceeeecccccccccccc-ccccccccCc--eeeecccc---cCCccceeecCCCceeEEe
Confidence 7789999999999985432 2223344556666665 5678888875 58999998 6678888887788899999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
|+|....+|+++..|++|.|+|+++... +..+. ..-.-+.|+|+|.+ +.|++|+.|..++.||++...
T Consensus 195 fNpvETsILas~~sDrsIvLyD~R~~~P-l~KVi-~~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l~--------- 262 (433)
T KOG0268|consen 195 FNPVETSILASCASDRSIVLYDLRQASP-LKKVI-LTMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNLS--------- 262 (433)
T ss_pred cCCCcchheeeeccCCceEEEecccCCc-cceee-eeccccceecCccc-cceeeccccccceehhhhhhc---------
Confidence 9999999999999999999999998654 44332 23456789999955 568999999999999999865
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.++....+|.+.|.+++|+|.|+ -+++||.|.+|+||.++.+..-..+... ....+.++.||.|.+++++||+
T Consensus 263 ----~p~~v~~dhvsAV~dVdfsptG~-EfvsgsyDksIRIf~~~~~~SRdiYhtk--RMq~V~~Vk~S~Dskyi~SGSd 335 (433)
T KOG0268|consen 263 ----RPLNVHKDHVSAVMDVDFSPTGQ-EFVSGSYDKSIRIFPVNHGHSRDIYHTK--RMQHVFCVKYSMDSKYIISGSD 335 (433)
T ss_pred ----ccchhhcccceeEEEeccCCCcc-hhccccccceEEEeecCCCcchhhhhHh--hhheeeEEEEeccccEEEecCC
Confidence 34556889999999999999999 7889999999999999988765555432 2345778899999999999999
Q ss_pred CCcccccccccccccccccchhhhh
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
|+. +++|.....+.
T Consensus 336 d~n-----------vRlWka~Asek 349 (433)
T KOG0268|consen 336 DGN-----------VRLWKAKASEK 349 (433)
T ss_pred Ccc-----------eeeeecchhhh
Confidence 999 56666554443
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=206.61 Aligned_cols=217 Identities=17% Similarity=0.207 Sum_probs=192.0
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+|..+.|+- ++++.++++.|.+|++|++. .+..+++..+|...|..++.+.|+.. |++|+.|..+.+||+.+
T Consensus 16 ~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~---rg~liktYsghG~EVlD~~~s~Dnsk-f~s~GgDk~v~vwDV~T 90 (307)
T KOG0316|consen 16 AQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPL---RGALIKTYSGHGHEVLDAALSSDNSK-FASCGGDKAVQVWDVNT 90 (307)
T ss_pred cccceEEEEEcc-CCCEEEEcCCCceEEeeccc---ccceeeeecCCCceeeeccccccccc-cccCCCCceEEEEEccc
Confidence 356889999999 68999999999999999998 67899999999999999999999996 99999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. .+.+.+|.+.|+.++|+.+.. ++++|+.|.++++||.++... ++++.+....+.|.++..+..
T Consensus 91 Gkv-~Rr~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s~------------ePiQildea~D~V~Si~v~~h 156 (307)
T KOG0316|consen 91 GKV-DRRFRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRSF------------EPIQILDEAKDGVSSIDVAEH 156 (307)
T ss_pred Cee-eeecccccceeeEEEecCcce-EEEeccccceeEEEEcccCCC------------CccchhhhhcCceeEEEeccc
Confidence 877 899999999999999998887 799999999999999998643 556667777889999988543
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.+++|+.||+++.||++.|.....+. ...+.++.|++||+....++-+++ +++.|-.+|++
T Consensus 157 ---eIvaGS~DGtvRtydiR~G~l~sDy~-----g~pit~vs~s~d~nc~La~~l~st-----------lrLlDk~tGkl 217 (307)
T KOG0316|consen 157 ---EIVAGSVDGTVRTYDIRKGTLSSDYF-----GHPITSVSFSKDGNCSLASSLDST-----------LRLLDKETGKL 217 (307)
T ss_pred ---EEEeeccCCcEEEEEeecceeehhhc-----CCcceeEEecCCCCEEEEeeccce-----------eeecccchhHH
Confidence 78899999999999999987655443 466778899999999999999998 89999999999
Q ss_pred hhhhcCCCccccccC
Q psy4571 342 QRQLLGTEEESSDRH 356 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~ 356 (437)
+..++||.+....+.
T Consensus 218 L~sYkGhkn~eykld 232 (307)
T KOG0316|consen 218 LKSYKGHKNMEYKLD 232 (307)
T ss_pred HHHhcccccceeeee
Confidence 999999998655543
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-27 Score=202.85 Aligned_cols=281 Identities=15% Similarity=0.141 Sum_probs=223.0
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+..-.-.|.++.|+ ++|..+++++.|.++++++...+.....+.+. +..+..+
T Consensus 10 f~~~~~~i~sl~fs-~~G~~litss~dDsl~LYd~~~g~~~~ti~sk--------------------------kyG~~~~ 62 (311)
T KOG1446|consen 10 FRETNGKINSLDFS-DDGLLLITSSEDDSLRLYDSLSGKQVKTINSK--------------------------KYGVDLA 62 (311)
T ss_pred cccCCCceeEEEec-CCCCEEEEecCCCeEEEEEcCCCceeeEeecc--------------------------cccccEE
Confidence 44456678899999 89999999999999999998877776654322 3466777
Q ss_pred EeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 110 AWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
+|.. ....++.++. |.+||..++. ..+.++.+.||...|++|+.+|-+. .+++++.|++|++||++..+. ..
T Consensus 63 ~Fth-~~~~~i~sStk~d~tIryLsl~---dNkylRYF~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~~~c-qg 136 (311)
T KOG1446|consen 63 CFTH-HSNTVIHSSTKEDDTIRYLSLH---DNKYLRYFPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRVKKC-QG 136 (311)
T ss_pred EEec-CCceEEEccCCCCCceEEEEee---cCceEEEcCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecCCCC-ce
Confidence 8866 3444445555 8899999999 6789999999999999999999987 599999999999999997554 44
Q ss_pred EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 188 ~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
.+.. ..-..++|.|+|- ++|++...+.|++||++....- |........+-....+.|.|+|||+. ++
T Consensus 137 ~l~~--~~~pi~AfDp~GL-ifA~~~~~~~IkLyD~Rs~dkg---------PF~tf~i~~~~~~ew~~l~FS~dGK~-iL 203 (311)
T KOG1446|consen 137 LLNL--SGRPIAAFDPEGL-IFALANGSELIKLYDLRSFDKG---------PFTTFSITDNDEAEWTDLEFSPDGKS-IL 203 (311)
T ss_pred EEec--CCCcceeECCCCc-EEEEecCCCeEEEEEecccCCC---------CceeEccCCCCccceeeeEEcCCCCE-EE
Confidence 4432 3335689999997 6888877779999999986421 11222222244678999999999994 55
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
.+...+.+++.|.-+|.....+............++|+|||+++.+|+.||+ |.+|++.+|+.+..+.+
T Consensus 204 lsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~-----------i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 204 LSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGT-----------IHVWNLETGKKVAVLRG 272 (311)
T ss_pred EEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCc-----------EEEEEcCCCcEeeEecC
Confidence 6678889999999999988888877665656678899999999999999999 89999999999999988
Q ss_pred -CCccccccCCCCCCcccccc
Q psy4571 348 -TEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 348 -h~~~~~~~~~~~~~~~~~~~ 367 (437)
+..+++++.|.|--..+++.
T Consensus 273 ~~~~~~~~~~fnP~~~mf~sa 293 (311)
T KOG1446|consen 273 PNGGPVSCVRFNPRYAMFVSA 293 (311)
T ss_pred CCCCCccccccCCceeeeeec
Confidence 68889999999977666554
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-28 Score=231.66 Aligned_cols=274 Identities=14% Similarity=0.143 Sum_probs=198.1
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEEC
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVAD 124 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~ 124 (437)
+++..+++++.+..+..|+..++.. +......+.+. +. ......+...|.+++|+|.++.+|++|+.
T Consensus 30 ~d~~~~~~~n~~~~a~~w~~~gg~~--v~~~~~~G~~~---~~--------~~~l~GH~~~V~~v~fsP~d~~~LaSgS~ 96 (493)
T PTZ00421 30 WDCSNTIACNDRFIAVPWQQLGSTA--VLKHTDYGKLA---SN--------PPILLGQEGPIIDVAFNPFDPQKLFTASE 96 (493)
T ss_pred CCCCCcEeECCceEEEEEecCCceE--EeeccccccCC---CC--------CceEeCCCCCEEEEEEcCCCCCEEEEEeC
Confidence 6677788898899889998765532 11111111100 00 00012356789999999976789999999
Q ss_pred CCcEEEEEcCCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEE
Q psy4571 125 DQKLMIWDTRSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200 (437)
Q Consensus 125 dg~v~vwd~~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~ 200 (437)
||+|++||+.... ...++..+.+|...|.+++|+|++..+|++|+.|++|+|||+++++. ...+..|...|.+++
T Consensus 97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~-~~~l~~h~~~V~sla 175 (493)
T PTZ00421 97 DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA-VEVIKCHSDQITSLE 175 (493)
T ss_pred CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE-EEEEcCCCCceEEEE
Confidence 9999999997532 12456788999999999999998765799999999999999998654 778888999999999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc-EEEEEEccCCCeEEEEE---eCCCeEE
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK-ISDFSWNPNEPWVICSV---SEDNIMQ 276 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~p~~~~~l~s~---~~dg~i~ 276 (437)
|+|++. +|++|+.|+.|++||++++.. +..+.+|.+. +..+.|.+++..++.+| +.|+.|+
T Consensus 176 ~spdG~-lLatgs~Dg~IrIwD~rsg~~--------------v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~Vk 240 (493)
T PTZ00421 176 WNLDGS-LLCTTSKDKKLNIIDPRDGTI--------------VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIM 240 (493)
T ss_pred EECCCC-EEEEecCCCEEEEEECCCCcE--------------EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEE
Confidence 999998 699999999999999998643 3446677654 45678999888444443 3589999
Q ss_pred EEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhhhhhh-cCCCccccc
Q psy4571 277 EYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQL-LGTEEESSD 354 (437)
Q Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~-~~h~~~~~~ 354 (437)
+||+++......... ...........|++++.++++++ .|+. |++||+..++..... ..+.++...
T Consensus 241 lWDlr~~~~p~~~~~-~d~~~~~~~~~~d~d~~~L~lggkgDg~-----------Iriwdl~~~~~~~~~~~~s~~~~~g 308 (493)
T PTZ00421 241 LWDTRKMASPYSTVD-LDQSSALFIPFFDEDTNLLYIGSKGEGN-----------IRCFELMNERLTFCSSYSSVEPHKG 308 (493)
T ss_pred EEeCCCCCCceeEec-cCCCCceEEEEEcCCCCEEEEEEeCCCe-----------EEEEEeeCCceEEEeeccCCCCCcc
Confidence 999987643222111 11122333457899999998887 4887 899999888766544 334445566
Q ss_pred cCCCC
Q psy4571 355 RHSSD 359 (437)
Q Consensus 355 ~~~~~ 359 (437)
+++.|
T Consensus 309 ~~~~p 313 (493)
T PTZ00421 309 LCMMP 313 (493)
T ss_pred eEecc
Confidence 66666
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=226.39 Aligned_cols=272 Identities=14% Similarity=0.199 Sum_probs=207.1
Q ss_pred ceEeeecCCCceeEEEecCCCCeE--EEecCceEEEEEeeecc-----ccccCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 58 EYKIWKKNTPFLYDLVVNNYVANI--SCILNISILFFEIIFTQ-----NFPFPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~-----~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
.+..|..|+..+..+.|.+....+ +++.|+.|+||++.... -..|..+|.+++|++ .+..|++++.|+.|++
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFDRFLKL 284 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-cCCeeeeeecceeeee
Confidence 344455555444444444422222 44445555555543311 123678999999999 6888899999999999
Q ss_pred EEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEE
Q psy4571 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 210 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 210 (437)
||++ +++.+..+.. ...++|+.|+|++.+++++|+.|+.|+.||+++++. ++.+..|-+.|..+.|-++|++ ++
T Consensus 285 wDtE---TG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kv-vqeYd~hLg~i~~i~F~~~g~r-Fi 358 (503)
T KOG0282|consen 285 WDTE---TGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKV-VQEYDRHLGAILDITFVDEGRR-FI 358 (503)
T ss_pred eccc---cceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHH-HHHHHhhhhheeeeEEccCCce-Ee
Confidence 9999 5666666643 446899999999988999999999999999999775 8889999999999999999996 88
Q ss_pred EEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc---e
Q psy4571 211 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT---K 287 (437)
Q Consensus 211 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~ 287 (437)
+.+.|++++||+.+..-..+. + ...+.-...++..+|+++ .++.-+.|+.|.++.+...-.. +
T Consensus 359 ssSDdks~riWe~~~~v~ik~-----------i--~~~~~hsmP~~~~~P~~~-~~~aQs~dN~i~ifs~~~~~r~nkkK 424 (503)
T KOG0282|consen 359 SSSDDKSVRIWENRIPVPIKN-----------I--ADPEMHTMPCLTLHPNGK-WFAAQSMDNYIAIFSTVPPFRLNKKK 424 (503)
T ss_pred eeccCccEEEEEcCCCccchh-----------h--cchhhccCcceecCCCCC-eehhhccCceEEEEecccccccCHhh
Confidence 999999999999988654332 1 222333567899999999 6888999999999987643222 2
Q ss_pred eeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCc
Q psy4571 288 TMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 288 ~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
.+..+. ..+-.+.+.|||||.+|++|+.+|. +.+||..+.+++..+.+|..++..+.++|...
T Consensus 425 ~feGh~-vaGys~~v~fSpDG~~l~SGdsdG~-----------v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~ 487 (503)
T KOG0282|consen 425 RFEGHS-VAGYSCQVDFSPDGRTLCSGDSDGK-----------VNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEP 487 (503)
T ss_pred hhccee-ccCceeeEEEcCCCCeEEeecCCcc-----------EEEeechhhhhhhccccCCcceEEEEecCCCc
Confidence 222222 2233556699999999999999999 89999999999999999999999999999654
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=218.29 Aligned_cols=271 Identities=23% Similarity=0.285 Sum_probs=222.3
Q ss_pred EeeecCCCceeEEEecCCCCeEE-EecCceEEEEEeeecc----ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 60 KIWKKNTPFLYDLVVNNYVANIS-CILNISILFFEIIFTQ----NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~~~i~-~~~~~~i~~~~~~~~~----~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
+.+..|.+.+..+.+++....+. +..++.+.+|+..... ...+...+..+.|+| ++..+++++.+|.|++||+.
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA-DGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECC-CCCEEEEEcCCCeEEEEEcC
Confidence 34556778899999998877774 4559999999986543 223456778999999 56789999999999999998
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
..+....+..|...+.++.|+|++. ++++++.||.|.+||+++.+. ...+..|...+.+++|+|++. ++++++.
T Consensus 82 ---~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 155 (289)
T cd00200 82 ---TGECVRTLTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVETGKC-LTTLRGHTDWVNSVAFSPDGT-FVASSSQ 155 (289)
T ss_pred ---cccceEEEeccCCcEEEEEEcCCCC-EEEEecCCCeEEEEECCCcEE-EEEeccCCCcEEEEEEcCcCC-EEEEEcC
Confidence 4456777788998999999999977 588888899999999997554 667778999999999999976 5777777
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
|+.|++||++..+. +..+..|...+.++.|+|+++ .+++++.|+.+++||++.++....+..
T Consensus 156 ~~~i~i~d~~~~~~--------------~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~d~~~~~~~~~~~~--- 217 (289)
T cd00200 156 DGTIKLWDLRTGKC--------------VATLTGHTGEVNSVAFSPDGE-KLLSSSSDGTIKLWDLSTGKCLGTLRG--- 217 (289)
T ss_pred CCcEEEEEcccccc--------------ceeEecCccccceEEECCCcC-EEEEecCCCcEEEEECCCCceecchhh---
Confidence 99999999986543 333568888999999999998 566788899999999998777666532
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+......+.++|++.++++++.++. +++||+.+++....+.+|...+..+.+++++..++.
T Consensus 218 ~~~~i~~~~~~~~~~~~~~~~~~~~-----------i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 278 (289)
T cd00200 218 HENGVNSVAFSPDGYLLASGSEDGT-----------IRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLAS 278 (289)
T ss_pred cCCceEEEEEcCCCcEEEEEcCCCc-----------EEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEE
Confidence 3446777899999999999887887 899999999988889999999999999998766554
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-27 Score=244.56 Aligned_cols=278 Identities=17% Similarity=0.185 Sum_probs=207.1
Q ss_pred CCCceeEEEecCCCCeE-EEecCceEEEEEeeec----c-------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEE
Q psy4571 65 NTPFLYDLVVNNYVANI-SCILNISILFFEIIFT----Q-------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWD 132 (437)
Q Consensus 65 ~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~----~-------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd 132 (437)
+.+.+..+.|++.+..+ +++.|+.|++|+.... . .+.....+.+++|+|..+.+|++++.||+|++||
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd 561 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWD 561 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence 45678889999888766 6778999999996421 0 1123457889999987788999999999999999
Q ss_pred cCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEE
Q psy4571 133 TRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILA 210 (437)
Q Consensus 133 ~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~ 210 (437)
+. ..+.+..+.+|.+.|.+++|+| ++. +|++|+.||+|++||++++.. +..+.. ...+.++.|++ ++. .++
T Consensus 562 ~~---~~~~~~~~~~H~~~V~~l~~~p~~~~-~L~Sgs~Dg~v~iWd~~~~~~-~~~~~~-~~~v~~v~~~~~~g~-~la 634 (793)
T PLN00181 562 VA---RSQLVTEMKEHEKRVWSIDYSSADPT-LLASGSDDGSVKLWSINQGVS-IGTIKT-KANICCVQFPSESGR-SLA 634 (793)
T ss_pred CC---CCeEEEEecCCCCCEEEEEEcCCCCC-EEEEEcCCCEEEEEECCCCcE-EEEEec-CCCeEEEEEeCCCCC-EEE
Confidence 98 4567788889999999999997 556 699999999999999998654 666654 46899999965 465 699
Q ss_pred EEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC------C
Q psy4571 211 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD------S 284 (437)
Q Consensus 211 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~------~ 284 (437)
+|+.||.|++||++.... .+..+.+|...|.++.|. ++. .+++++.|+.|++||++.+ +
T Consensus 635 tgs~dg~I~iwD~~~~~~-------------~~~~~~~h~~~V~~v~f~-~~~-~lvs~s~D~~ikiWd~~~~~~~~~~~ 699 (793)
T PLN00181 635 FGSADHKVYYYDLRNPKL-------------PLCTMIGHSKTVSYVRFV-DSS-TLVSSSTDNTLKLWDLSMSISGINET 699 (793)
T ss_pred EEeCCCeEEEEECCCCCc-------------cceEecCCCCCEEEEEEe-CCC-EEEEEECCCEEEEEeCCCCccccCCc
Confidence 999999999999986431 234467899999999997 566 6889999999999999853 2
Q ss_pred CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh--hhcCCCccccccCCCCCCc
Q psy4571 285 DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~~~h~~~~~~~~~~~~~~ 362 (437)
++..+. .+......++++|++.++++|+.|+.+.+|+......+..|.......+. ....|.+.++.+.+++++.
T Consensus 700 ~l~~~~---gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~ 776 (793)
T PLN00181 700 PLHSFM---GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSS 776 (793)
T ss_pred ceEEEc---CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCC
Confidence 333332 24445566789999999999999999655544322222222222111111 1245666788888999887
Q ss_pred ccccc
Q psy4571 363 EDLNS 367 (437)
Q Consensus 363 ~~~~~ 367 (437)
.++..
T Consensus 777 ~lva~ 781 (793)
T PLN00181 777 TLVAA 781 (793)
T ss_pred eEEEe
Confidence 65543
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=222.91 Aligned_cols=228 Identities=21% Similarity=0.344 Sum_probs=189.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+|.|+.+. +..+++|..|++|+|||.. ....+..+.||++.|.|+.|.. + +|++|+.|.+|++||.+++
T Consensus 197 skgVYClQYD---D~kiVSGlrDnTikiWD~n---~~~c~~~L~GHtGSVLCLqyd~--r-viisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 197 SKGVYCLQYD---DEKIVSGLRDNTIKIWDKN---SLECLKILTGHTGSVLCLQYDE--R-VIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred CCceEEEEec---chhhhcccccCceEEeccc---cHHHHHhhhcCCCcEEeeeccc--e-EEEecCCCceEEEEeccCC
Confidence 4578899884 4678899999999999998 5677888999999999999963 4 7999999999999999996
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+. +.++..|...|..+.|+. | ++++++.|.++.|||+...... .+.+.+.||...|+.+.|+ .
T Consensus 268 e~-l~tlihHceaVLhlrf~n-g--~mvtcSkDrsiaVWdm~sps~i-----------t~rrVLvGHrAaVNvVdfd--~ 330 (499)
T KOG0281|consen 268 EP-LNTLIHHCEAVLHLRFSN-G--YMVTCSKDRSIAVWDMASPTDI-----------TLRRVLVGHRAAVNVVDFD--D 330 (499)
T ss_pred ch-hhHHhhhcceeEEEEEeC-C--EEEEecCCceeEEEeccCchHH-----------HHHHHHhhhhhheeeeccc--c
Confidence 65 888999999999999974 2 5899999999999999876422 2334578999999999994 4
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
+ ++++++.|.+|++|++.+++.++++.. |..+.. +..-.|+++++|+.|.+ |++||+..|.++
T Consensus 331 k-yIVsASgDRTikvW~~st~efvRtl~g---HkRGIA--ClQYr~rlvVSGSSDnt-----------IRlwdi~~G~cL 393 (499)
T KOG0281|consen 331 K-YIVSASGDRTIKVWSTSTCEFVRTLNG---HKRGIA--CLQYRDRLVVSGSSDNT-----------IRLWDIECGACL 393 (499)
T ss_pred c-eEEEecCCceEEEEeccceeeehhhhc---ccccce--ehhccCeEEEecCCCce-----------EEEEeccccHHH
Confidence 4 899999999999999999999988875 334433 33558999999999999 999999999999
Q ss_pred hhhcCCCccccccCCCCCC-----ccccccccccCH
Q psy4571 343 RQLLGTEEESSDRHSSDND-----TEDLNSIWSMTD 373 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~~~-----~~~~~~~w~~~~ 373 (437)
+.+.||++-+.++-|.... -.....+|++..
T Consensus 394 RvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~a 429 (499)
T KOG0281|consen 394 RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 429 (499)
T ss_pred HHHhchHHhhhheeecCceeeeccccceEEEEeccc
Confidence 9999999999988765411 111145999843
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=212.51 Aligned_cols=256 Identities=19% Similarity=0.321 Sum_probs=204.8
Q ss_pred ceEeee--cCCCceeEEEecCCCCeEEE--ecCceEEEEEeeeccc--------------cccCCCcceEEeeCCCCCEE
Q psy4571 58 EYKIWK--KNTPFLYDLVVNNYVANISC--ILNISILFFEIIFTQN--------------FPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 58 ~v~iw~--~~~~~~~~~~~~~~~~~i~~--~~~~~i~~~~~~~~~~--------------~~~~~~v~~~~~sp~~~~~l 119 (437)
.|++-. .|.+.+......|....+.+ ...+.+.|||...... ..+...-..++|++.....|
T Consensus 114 ~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~L 193 (422)
T KOG0264|consen 114 KVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTL 193 (422)
T ss_pred ceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeE
Confidence 444444 35677777777788888866 4667899999542211 11333477899999999999
Q ss_pred EEEECCCcEEEEEcCCCCC----CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC-CceeeeEeccCCC
Q psy4571 120 GSVADDQKLMIWDTRSHNV----SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN-LKLKLHSFESHKD 194 (437)
Q Consensus 120 ~~~~~dg~v~vwd~~~~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~-~~~~~~~~~~h~~ 194 (437)
++|+.|++|++||+..... ..+...+.+|+..|..++|++....+|++++.|+.+.|||+|+ ...+.....+|.+
T Consensus 194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~ 273 (422)
T KOG0264|consen 194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSA 273 (422)
T ss_pred eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCC
Confidence 9999999999999986543 3466788899999999999999888999999999999999995 2444667789999
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
+|.|++|+|-+.++|||||.|++|++||+|+.. .++..+.+|...|.+|.|+|....+|++++.|+.
T Consensus 274 ~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~-------------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~r 340 (422)
T KOG0264|consen 274 EVNCVAFNPFNEFILATGSADKTVALWDLRNLN-------------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRR 340 (422)
T ss_pred ceeEEEeCCCCCceEEeccCCCcEEEeechhcc-------------cCceeccCCCcceEEEEeCCCCCceeEecccCCc
Confidence 999999999999999999999999999999965 3567799999999999999999889999999999
Q ss_pred EEEEeCCCCCCce-----------eeeeeecccCCceeeeecCCCC-cccccCCCCcccccccccccccccccch
Q psy4571 275 MQEYCDSTDSDTK-----------TMRLDSIRSNGGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 275 i~iwd~~~~~~~~-----------~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+.+||+..-...+ .+-.+..|...+....|.|+-- .+++.+.|+. +.||+..
T Consensus 341 l~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~-----------LqIW~~s 404 (422)
T KOG0264|consen 341 LNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNI-----------LQIWQMA 404 (422)
T ss_pred EEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCce-----------EEEeecc
Confidence 9999997543332 2234555666677778999876 5667778877 5667664
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-26 Score=223.28 Aligned_cols=229 Identities=14% Similarity=0.211 Sum_probs=169.5
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-----CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-----SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
.|...|.+++|+|.++.+|++|+.||+|+|||+.+... ..++..+.+|...|.+++|+|++..+|++|+.|++|+
T Consensus 72 gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIr 151 (568)
T PTZ00420 72 GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVN 151 (568)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEE
Confidence 35678999999996688999999999999999975321 1244567899999999999999987778999999999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+||+++++. ...+. |...|.+++|+|+|. +|++++.|+.|++||++++.. +..+.+|.+.+..
T Consensus 152 IWDl~tg~~-~~~i~-~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~--------------i~tl~gH~g~~~s 214 (568)
T PTZ00420 152 IWDIENEKR-AFQIN-MPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEI--------------ASSFHIHDGGKNT 214 (568)
T ss_pred EEECCCCcE-EEEEe-cCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcE--------------EEEEecccCCcee
Confidence 999998665 44554 668899999999998 688999999999999998643 3446788765433
Q ss_pred -----EEEccCCCeEEEEEeCC----CeEEEEeCCC-CCCceeeeeeecccCCceeee-ecCCCCcccccCCCCcccccc
Q psy4571 256 -----FSWNPNEPWVICSVSED----NIMQEYCDST-DSDTKTMRLDSIRSNGGISST-ASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 256 -----l~~~p~~~~~l~s~~~d----g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~-~s~~g~~l~s~s~d~~~~~~~ 324 (437)
..|++++. .+++++.| +.|++||++. ++++..+.... ..+.+... ..++|.++++|+.|++
T Consensus 215 ~~v~~~~fs~d~~-~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~--~~~~L~p~~D~~tg~l~lsGkGD~t----- 286 (568)
T PTZ00420 215 KNIWIDGLGGDDN-YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDN--ASAPLIPHYDESTGLIYLIGKGDGN----- 286 (568)
T ss_pred EEEEeeeEcCCCC-EEEEEEcCCCCccEEEEEECCCCCCceEEEEecC--CccceEEeeeCCCCCEEEEEECCCe-----
Confidence 33568888 56676655 3799999995 45555443321 22232233 3566899999999999
Q ss_pred cccccccccccchhhhhhhhh--cCCCccccccCCCCCC
Q psy4571 325 KNYWQGLVLFDILVCEEQRQL--LGTEEESSDRHSSDND 361 (437)
Q Consensus 325 ~~~~~~i~~wd~~~~~~~~~~--~~h~~~~~~~~~~~~~ 361 (437)
|++|++..+. +..+ ..+..+...+.+.|..
T Consensus 287 ------Ir~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 287 ------CRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred ------EEEEEccCCc-EEeecccccCCCccceEEcccc
Confidence 7888887653 2223 2244556666777744
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=221.82 Aligned_cols=285 Identities=18% Similarity=0.227 Sum_probs=227.9
Q ss_pred hcccceeEEecCCc---------------ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc---------eeEE
Q psy4571 17 LSQNAFFTWSALPL---------------SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------LYDL 72 (437)
Q Consensus 17 ~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------~~~~ 72 (437)
+..|.++.|+.... .-+.-.|-++|++ .+...+++|+ .+.+++|+.++.. ....
T Consensus 341 l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS-~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~ 418 (888)
T KOG0306|consen 341 LANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVS-SDSILLASGA-GESIKIWNRDTLKCIRTITCGYILAS 418 (888)
T ss_pred eecCceEEEEeccCCCCCccccccceeeeccchhheeEEEee-cCceeeeecC-CCcEEEEEccCcceeEEeccccEEEE
Confidence 55577777776661 1223458889999 7677777765 6789999977543 4444
Q ss_pred EecCCCCeE-EEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC----CCCCC-e
Q psy4571 73 VVNNYVANI-SCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH----NVSKP-S 142 (437)
Q Consensus 73 ~~~~~~~~i-~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~----~~~~~-~ 142 (437)
.|-|....+ .....|.+.++|+..... ..|...+..++.+| ++..+++|+.|.+|++||..-- ...+. +
T Consensus 419 ~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~l 497 (888)
T KOG0306|consen 419 KFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVL 497 (888)
T ss_pred EecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCcccceee
Confidence 455666665 556788999999765432 35788999999999 6788899999999999997521 11111 1
Q ss_pred -----eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 143 -----HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 143 -----~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
+++ .-+..|.|+++||||++ |+.+--|.++++|-+++.+- ...+.+|.-||.|+..+||++ +++|||.|.+
T Consensus 498 sl~~~rtL-el~ddvL~v~~Spdgk~-LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSk-livTgSADKn 573 (888)
T KOG0306|consen 498 SLKHTRTL-ELEDDVLCVSVSPDGKL-LAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSK-LIVTGSADKN 573 (888)
T ss_pred eeccceEE-eccccEEEEEEcCCCcE-EEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcC-eEEeccCCCc
Confidence 111 23568999999999995 99999999999999999776 667889999999999999998 7999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
|++|-+.-+.+-.+ +.+|.+.|.++.|.|... ++.++|.|+.|+-||....+.++.+.. |+.
T Consensus 574 VKiWGLdFGDCHKS--------------~fAHdDSvm~V~F~P~~~-~FFt~gKD~kvKqWDg~kFe~iq~L~~---H~~ 635 (888)
T KOG0306|consen 574 VKIWGLDFGDCHKS--------------FFAHDDSVMSVQFLPKTH-LFFTCGKDGKVKQWDGEKFEEIQKLDG---HHS 635 (888)
T ss_pred eEEeccccchhhhh--------------hhcccCceeEEEEcccce-eEEEecCcceEEeechhhhhhheeecc---chh
Confidence 99999998876555 779999999999999777 788999999999999999888888775 667
Q ss_pred CceeeeecCCCCcccccCCCCcccccccc
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
.+.+.+.+|+|.++++++.|.++++|+..
T Consensus 636 ev~cLav~~~G~~vvs~shD~sIRlwE~t 664 (888)
T KOG0306|consen 636 EVWCLAVSPNGSFVVSSSHDKSIRLWERT 664 (888)
T ss_pred eeeeeEEcCCCCeEEeccCCceeEeeecc
Confidence 78888999999999999999997666543
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-27 Score=196.74 Aligned_cols=206 Identities=26% Similarity=0.408 Sum_probs=170.2
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
++..+..++|+|-.+.+||+|+.|..|++|+...+........+ .+|+..|.+++|+|.|++ |++||.|.++.||.-.
T Consensus 13 h~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~-La~aSFD~t~~Iw~k~ 91 (312)
T KOG0645|consen 13 HKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRY-LASASFDATVVIWKKE 91 (312)
T ss_pred CCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcE-EEEeeccceEEEeecC
Confidence 44578899999933779999999999999999853333333333 379999999999999995 9999999999999866
Q ss_pred CCc-eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 181 NLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 181 ~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.+. .++.++.+|...|.+++|+++|+ +||+++.|+.|-||.+..... .+++..+.+|...|..+.|+
T Consensus 92 ~~efecv~~lEGHEnEVK~Vaws~sG~-~LATCSRDKSVWiWe~deddE-----------fec~aVL~~HtqDVK~V~WH 159 (312)
T KOG0645|consen 92 DGEFECVATLEGHENEVKCVAWSASGN-YLATCSRDKSVWIWEIDEDDE-----------FECIAVLQEHTQDVKHVIWH 159 (312)
T ss_pred CCceeEEeeeeccccceeEEEEcCCCC-EEEEeeCCCeEEEEEecCCCc-----------EEEEeeeccccccccEEEEc
Confidence 432 45788999999999999999998 599999999999999985432 35677899999999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCC---CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTD---SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
|... +|+++|.|++|++|+-..+ .+.+++.. +...+...+|+|.|..|++++.|+++++|.
T Consensus 160 Pt~d-lL~S~SYDnTIk~~~~~~dddW~c~~tl~g---~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 160 PTED-LLFSCSYDNTIKVYRDEDDDDWECVQTLDG---HENTVWSLAFDNIGSRLVSCSDDGTVSIWR 223 (312)
T ss_pred CCcc-eeEEeccCCeEEEEeecCCCCeeEEEEecC---ccceEEEEEecCCCceEEEecCCcceEeee
Confidence 9888 9999999999999988743 23444433 555788889999999999999999965553
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=233.44 Aligned_cols=242 Identities=16% Similarity=0.264 Sum_probs=205.6
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
+..|..++|+| ....++++-.+|.|++||.+ ....+..+.+|.++|..++|+|+++ +++||+.|..|++|+.++
T Consensus 9 SsRvKglsFHP-~rPwILtslHsG~IQlWDYR---M~tli~rFdeHdGpVRgv~FH~~qp-lFVSGGDDykIkVWnYk~- 82 (1202)
T KOG0292|consen 9 SSRVKGLSFHP-KRPWILTSLHSGVIQLWDYR---MGTLIDRFDEHDGPVRGVDFHPTQP-LFVSGGDDYKIKVWNYKT- 82 (1202)
T ss_pred cccccceecCC-CCCEEEEeecCceeeeehhh---hhhHHhhhhccCCccceeeecCCCC-eEEecCCccEEEEEeccc-
Confidence 35788999999 68899999999999999999 7888999999999999999999999 699999999999999999
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+.++.++.+|-+-|..+.|++.-++ ++++|.|.+|+||+..+. +++..+.||...|.|.+|+|..
T Consensus 83 rrclftL~GHlDYVRt~~FHheyPW-IlSASDDQTIrIWNwqsr--------------~~iavltGHnHYVMcAqFhptE 147 (1202)
T KOG0292|consen 83 RRCLFTLLGHLDYVRTVFFHHEYPW-ILSASDDQTIRIWNWQSR--------------KCIAVLTGHNHYVMCAQFHPTE 147 (1202)
T ss_pred ceehhhhccccceeEEeeccCCCce-EEEccCCCeEEEEeccCC--------------ceEEEEecCceEEEeeccCCcc
Confidence 4459999999999999999999995 889999999999999886 4567799999999999999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceee--------------------------eeeecccCCceeeeecCCCCcccccCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTM--------------------------RLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
. +++++|.|.+||+||+..-+....- ..-..|..++..++|+|.-.++++|++
T Consensus 148 D-lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~D 226 (1202)
T KOG0292|consen 148 D-LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGAD 226 (1202)
T ss_pred c-eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCC
Confidence 8 8999999999999998642211000 012236667888899999999999999
Q ss_pred CCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCHHH
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~~~ 375 (437)
|..+++|..+. -+.|.+ .++.||.+.|+++.|+|....+++. +|+++...
T Consensus 227 DRqVKlWrmne---tKaWEv------DtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt 283 (1202)
T KOG0292|consen 227 DRQVKLWRMNE---TKAWEV------DTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRT 283 (1202)
T ss_pred cceeeEEEecc---ccceee------hhhhcccCCcceEEecCccceeEecCCCccEEEEeccccc
Confidence 99977776554 345554 5678999999999999988776664 99996643
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-27 Score=210.43 Aligned_cols=268 Identities=18% Similarity=0.252 Sum_probs=214.8
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeEEEe-cCceEEEEEeeec-
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANISCI-LNISILFFEIIFT- 97 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i~~~-~~~~i~~~~~~~~- 97 (437)
.-.+-.|.++||++..+.-+++.+ ...+.+++.. ...+++..+-.+++.+.|+ ..|-|++||....
T Consensus 23 ~ke~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~ 101 (487)
T KOG0310|consen 23 HKEHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRV 101 (487)
T ss_pred ccccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHH
Confidence 344666889999954444455444 2346777733 2457788887888877554 5689999995542
Q ss_pred ---cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 98 ---QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 98 ---~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
.-..+..++..+.|+|+++.+|++|+.|+.+++||+.+ ......+.+|++.|.|.+|+|...++++||+.||.|
T Consensus 102 iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~---a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 102 ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST---AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC---cEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 23457889999999999999999999999999999984 334557889999999999999999899999999999
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
++||++.....+..+ .|..+|..+.+-|.|. ++++++ ...|+|||+.++.. .+..+..|...|+
T Consensus 179 rl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs-~iasAg-Gn~vkVWDl~~G~q-------------ll~~~~~H~KtVT 242 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVEL-NHGCPVESVLALPSGS-LIASAG-GNSVKVWDLTTGGQ-------------LLTSMFNHNKTVT 242 (487)
T ss_pred EEEEeccCCceeEEe-cCCCceeeEEEcCCCC-EEEEcC-CCeEEEEEecCCce-------------ehhhhhcccceEE
Confidence 999999865545566 5999999999999998 577876 46899999997642 3334556999999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
|+.+..++. .|++|+-|+.+++||+.+.+.+..+.. ..++.+++.+|+++.++.|-.+|.+..-
T Consensus 243 cL~l~s~~~-rLlS~sLD~~VKVfd~t~~Kvv~s~~~----~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 243 CLRLASDST-RLLSGSLDRHVKVFDTTNYKVVHSWKY----PGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred EEEeecCCc-eEeecccccceEEEEccceEEEEeeec----ccceeeEEecCCCceEEEecccceeeee
Confidence 999999998 677999999999999888777766653 5678899999999999999999986543
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=214.76 Aligned_cols=276 Identities=17% Similarity=0.207 Sum_probs=212.0
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
.+++..-.|.++++. |.|.++++||.|.+|++||.+ +..+..+.|++.++.+ +..+....+|
T Consensus 162 ~l~hgtk~Vsal~~D-p~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVD-PSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred eccCCceEEEEeeec-CCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 346778889999999 999999999999999999932 4557778888888777 4456778888
Q ss_pred EEee--------eccc--------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCe
Q psy4571 92 FEII--------FTQN--------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEV 152 (437)
Q Consensus 92 ~~~~--------~~~~--------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v 152 (437)
+|-. .+.+ ..|-..++|.+|+|.+...|++++.||++|+||+........+..-+ +..-++
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 8732 1211 12445789999999999999999999999999998643222221111 233478
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce--eeeEeccCCC--ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~--~~~~~~~h~~--~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
+.++|+++|.. ||+|..||+|.+|+...... .+..-.+|.. .|+||.|+++|++ |++-+.|+++++||++..+.
T Consensus 321 tsC~~nrdg~~-iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~-LlSRg~D~tLKvWDLrq~kk 398 (641)
T KOG0772|consen 321 TSCAWNRDGKL-IAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNY-LLSRGFDDTLKVWDLRQFKK 398 (641)
T ss_pred eeeecCCCcch-hhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccch-hhhccCCCceeeeecccccc
Confidence 99999999995 99999999999999764221 1233457877 8999999999995 88999999999999998653
Q ss_pred CCCCCCCCCCCCceEEEecCc--cccEEEEEEccCCCeEEEEEe------CCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 229 EQSTEDAEDGPPELLFIHGGH--TAKISDFSWNPNEPWVICSVS------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
.. ....+- ..+-+.++|+|+.+ ++++|. ..|.+.+||..+...++.+... ...++
T Consensus 399 pL-------------~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~---~aSvv 461 (641)
T KOG0772|consen 399 PL-------------NVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS---TASVV 461 (641)
T ss_pred ch-------------hhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEeccceeeEEEecCC---CceEE
Confidence 32 222222 23457789999999 888885 3578999999988777777653 45677
Q ss_pred eeeecCCCCcccccCCCCcccccc
Q psy4571 301 SSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 301 ~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.+.|+|.=+.+..|+.||++.++-
T Consensus 462 ~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 462 RCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred EEeecchhhheeeecCCCceEEEE
Confidence 789999999999999999976653
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=218.41 Aligned_cols=242 Identities=17% Similarity=0.213 Sum_probs=212.6
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
....|.++.|+| .+..++++-.+|.|.|||.+ +...++.+.-..-+|.+..|-+.... +++|+.|..|++|+..+
T Consensus 12 rSdRVKsVd~HP-tePw~la~LynG~V~IWnye---tqtmVksfeV~~~PvRa~kfiaRknW-iv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 12 RSDRVKSVDFHP-TEPWILAALYNGDVQIWNYE---TQTMVKSFEVSEVPVRAAKFIARKNW-IVTGSDDMQIRVFNYNT 86 (794)
T ss_pred cCCceeeeecCC-CCceEEEeeecCeeEEEecc---cceeeeeeeecccchhhheeeeccce-EEEecCCceEEEEeccc
Confidence 456899999999 57888899999999999999 66778888888889999999998886 99999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.+. +..+.+|.+-|.+++.+|+.++ ++|+|.|.+|++||-+.. +.+.+++.||...|.+++|+|.
T Consensus 87 ~ek-V~~FeAH~DyIR~iavHPt~P~-vLtsSDDm~iKlW~we~~-------------wa~~qtfeGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 87 GEK-VKTFEAHSDYIRSIAVHPTLPY-VLTSSDDMTIKLWDWENE-------------WACEQTFEGHEHYVMQVAFNPK 151 (794)
T ss_pred cee-eEEeeccccceeeeeecCCCCe-EEecCCccEEEEeeccCc-------------eeeeeEEcCcceEEEEEEecCC
Confidence 777 9999999999999999999996 889999999999999874 4666789999999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC--CcccccCCCCcccccccccccccccccchhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA--SSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g--~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
..+.+++++.|++|++|.+.+..+..++.. |..++.++.+-+-| -++++|++|.+ +++||..|.
T Consensus 152 D~ntFaS~sLDrTVKVWslgs~~~nfTl~g---HekGVN~Vdyy~~gdkpylIsgaDD~t-----------iKvWDyQtk 217 (794)
T KOG0276|consen 152 DPNTFASASLDRTVKVWSLGSPHPNFTLEG---HEKGVNCVDYYTGGDKPYLISGADDLT-----------IKVWDYQTK 217 (794)
T ss_pred CccceeeeeccccEEEEEcCCCCCceeeec---cccCcceEEeccCCCcceEEecCCCce-----------EEEeecchH
Confidence 888999999999999999998877777764 67888888886655 59999999999 899999999
Q ss_pred hhhhhhcCCCccccccCCCCCCccccc-------cccccCHHHHH
Q psy4571 340 EEQRQLLGTEEESSDRHSSDNDTEDLN-------SIWSMTDEQRE 377 (437)
Q Consensus 340 ~~~~~~~~h~~~~~~~~~~~~~~~~~~-------~~w~~~~~~~~ 377 (437)
.+++++.||...++.+.|+|.-..+++ .+|+...-..+
T Consensus 218 ~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE 262 (794)
T KOG0276|consen 218 SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLE 262 (794)
T ss_pred HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehh
Confidence 999999999999999999885544443 38887554443
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=200.75 Aligned_cols=203 Identities=17% Similarity=0.196 Sum_probs=177.3
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.++..|+.+.|+| ++.+||+|+.|..|.+|++.. .-+....+++|.+.|..+.|.+|+.. +++++.|.+|+.||++
T Consensus 45 gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~g--dceN~~~lkgHsgAVM~l~~~~d~s~-i~S~gtDk~v~~wD~~ 120 (338)
T KOG0265|consen 45 GHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYG--DCENFWVLKGHSGAVMELHGMRDGSH-ILSCGTDKTVRGWDAE 120 (338)
T ss_pred CCcceEEEEEECC-CCCeEeecCCcceEEEEeccc--cccceeeeccccceeEeeeeccCCCE-EEEecCCceEEEEecc
Confidence 4567899999999 899999999999999999764 33566778899999999999999995 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
+++. ...++.|..-|+.+.-+..|..++.+|+.|+++++||++.....+. + ..+..++++.|..
T Consensus 121 tG~~-~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t--------------~-~~kyqltAv~f~d 184 (338)
T KOG0265|consen 121 TGKR-IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKT--------------F-ENKYQLTAVGFKD 184 (338)
T ss_pred ccee-eehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhc--------------c-ccceeEEEEEecc
Confidence 9776 8889999999999997777888899999999999999998655443 2 2356789999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
++. .+.+|+-|+.|++||++.+.....+.. +...++.+..+|+|.++.+.+-|.+ +++||++.
T Consensus 185 ~s~-qv~sggIdn~ikvWd~r~~d~~~~lsG---h~DtIt~lsls~~gs~llsnsMd~t-----------vrvwd~rp 247 (338)
T KOG0265|consen 185 TSD-QVISGGIDNDIKVWDLRKNDGLYTLSG---HADTITGLSLSRYGSFLLSNSMDNT-----------VRVWDVRP 247 (338)
T ss_pred ccc-ceeeccccCceeeeccccCcceEEeec---ccCceeeEEeccCCCccccccccce-----------EEEEEecc
Confidence 888 677999999999999999888777765 6688888999999999999999998 78888754
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=219.95 Aligned_cols=259 Identities=21% Similarity=0.337 Sum_probs=216.5
Q ss_pred CCeEEEecCceEEEEEeeecccc---cc-CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-CCCCe
Q psy4571 78 VANISCILNISILFFEIIFTQNF---PF-PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEV 152 (437)
Q Consensus 78 ~~~i~~~~~~~i~~~~~~~~~~~---~~-~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-h~~~v 152 (437)
...++.+....+.+|+...+... .+ ...|+++.|++ ++.+|++|..+|.|.|||.. ..+.+..+.+ |...|
T Consensus 188 ~n~laValg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~---~~k~~~~~~~~h~~rv 263 (484)
T KOG0305|consen 188 ANVLAVALGQSVYLWSASSGSVTELCSFGEELVTSVKWSP-DGSHLAVGTSDGTVQIWDVK---EQKKTRTLRGSHASRV 263 (484)
T ss_pred CCeEEEEecceEEEEecCCCceEEeEecCCCceEEEEECC-CCCEEEEeecCCeEEEEehh---hccccccccCCcCcee
Confidence 34456666668999986655422 22 67899999999 78999999999999999998 5667777777 99999
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.+++|. +. ++.+|+.|+.|..+|++..+.....+.+|...|..+.|++++.+ +|+|+.|+.+.|||....
T Consensus 264 g~laW~--~~-~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~-lASGgnDN~~~Iwd~~~~------ 333 (484)
T KOG0305|consen 264 GSLAWN--SS-VLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQ-LASGGNDNVVFIWDGLSP------ 333 (484)
T ss_pred EEEecc--Cc-eEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCe-eccCCCccceEeccCCCc------
Confidence 999998 33 69999999999999999877655558899999999999999985 999999999999999543
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
.++..+..|...|.+++|+|-.+.+||+|+ .|++|++||..+++.+..+.. ...+.++.|++..+-
T Consensus 334 --------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt----gsQVcsL~Wsk~~kE 401 (484)
T KOG0305|consen 334 --------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT----GSQVCSLIWSKKYKE 401 (484)
T ss_pred --------cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc----CCceeeEEEcCCCCE
Confidence 345668899999999999998888999985 699999999999998887763 456777899999976
Q ss_pred ccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------cccc
Q psy4571 311 TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 311 l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~ 371 (437)
++++.....- .|.+|+..+-+.+..+.||...|..+..+|||+.+++. +|.+
T Consensus 402 i~sthG~s~n---------~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 402 LLSTHGYSEN---------QITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNL 460 (484)
T ss_pred EEEecCCCCC---------cEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccc
Confidence 6555332221 28999999999999999999999999999999988775 7776
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=215.91 Aligned_cols=274 Identities=20% Similarity=0.204 Sum_probs=229.9
Q ss_pred CCCceeEEEecCCCCeEEEecCceEEEEEeeecccccc--CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe
Q psy4571 65 NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPF--PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS 142 (437)
Q Consensus 65 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~--~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 142 (437)
|...+..+.++.+.-.+...+.+++++|+....+++.. ...+.+..|-| +++++++|...|.+.+||+. ....+
T Consensus 372 HR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdla---S~~l~ 447 (888)
T KOG0306|consen 372 HRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVP-GDRYIVLGTKNGELQVFDLA---SASLV 447 (888)
T ss_pred chhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEecC-CCceEEEeccCCceEEEEee---hhhhh
Confidence 33456667776666666667788999999876665542 23677889999 88999999999999999998 45566
Q ss_pred eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC-----ce-eeeEe-----ccCCCceEEEEEcCCCCcEEEE
Q psy4571 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL-----KL-KLHSF-----ESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 143 ~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~-----~~-~~~~~-----~~h~~~v~~v~~~p~~~~~l~s 211 (437)
-+.++|.+.|.+++.+||+.. +++|+.|.+|++||..-. .. ....+ ......|.|+++||||+ +|+.
T Consensus 448 Eti~AHdgaIWsi~~~pD~~g-~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk-~LaV 525 (888)
T KOG0306|consen 448 ETIRAHDGAIWSISLSPDNKG-FVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK-LLAV 525 (888)
T ss_pred hhhhccccceeeeeecCCCCc-eEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCc-EEEE
Confidence 667799999999999999997 999999999999997521 10 11111 12457899999999999 5999
Q ss_pred EeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 212 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
+=.|.+++||-+.+. +....+-||.-+|.|+..+||++ +++|||.|..|++|-++-|.|-+.+-.
T Consensus 526 sLLdnTVkVyflDtl--------------KFflsLYGHkLPV~smDIS~DSk-livTgSADKnVKiWGLdFGDCHKS~fA 590 (888)
T KOG0306|consen 526 SLLDNTVKVYFLDTL--------------KFFLSLYGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGLDFGDCHKSFFA 590 (888)
T ss_pred EeccCeEEEEEecce--------------eeeeeecccccceeEEeccCCcC-eEEeccCCCceEEeccccchhhhhhhc
Confidence 999999999999886 33455789999999999999999 999999999999999999999888765
Q ss_pred eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc----
Q psy4571 292 DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS---- 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~---- 367 (437)
|...+.++.|-|....+.+++.|+. ++-||...-+.++.+.||...+.+++.+|+|..+.++
T Consensus 591 ---HdDSvm~V~F~P~~~~FFt~gKD~k-----------vKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~ 656 (888)
T KOG0306|consen 591 ---HDDSVMSVQFLPKTHLFFTCGKDGK-----------VKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDK 656 (888)
T ss_pred ---ccCceeEEEEcccceeEEEecCcce-----------EEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCc
Confidence 5678899999999999999999999 8999999999999999999999999999999877765
Q ss_pred ---ccccCH
Q psy4571 368 ---IWSMTD 373 (437)
Q Consensus 368 ---~w~~~~ 373 (437)
+|..+.
T Consensus 657 sIRlwE~td 665 (888)
T KOG0306|consen 657 SIRLWERTD 665 (888)
T ss_pred eeEeeeccC
Confidence 787654
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=219.42 Aligned_cols=302 Identities=14% Similarity=0.218 Sum_probs=228.2
Q ss_pred eEEEeeccCceEeeecCCCceeEE----EecCCCCeEEEe-------cCceEEEEEeeeccccccCCCcceEEeeCCCCC
Q psy4571 49 AVEERVINEEYKIWKKNTPFLYDL----VVNNYVANISCI-------LNISILFFEIIFTQNFPFPLSRQDVAWHLLHES 117 (437)
Q Consensus 49 ~l~tgs~d~~v~iw~~~~~~~~~~----~~~~~~~~i~~~-------~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 117 (437)
-+.|+|.|++||+|+...+.--++ .++...-.+... .|-..-++|-.......-...+.+++.+| ++.
T Consensus 394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gq 472 (1080)
T KOG1408|consen 394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQ 472 (1080)
T ss_pred ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-Ccc
Confidence 377888888888888665221111 111111111111 11112222222222223345789999999 799
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+||+|..-|.++||++. ..+....+.+|+..|.|+.|+.. +..+||+++.|..|.++|+...-.++.++.+|...
T Consensus 473 hLAsGDr~GnlrVy~Lq---~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSss 549 (1080)
T KOG1408|consen 473 HLASGDRGGNLRVYDLQ---ELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSS 549 (1080)
T ss_pred eecccCccCceEEEEeh---hhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccc
Confidence 99999999999999998 56777788899999999999842 44479999999999999999877778899999999
Q ss_pred eEEEEEcCCC-CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC---ccccEEEEEEccCCCeEEEEEeC
Q psy4571 196 IFQVQWSPHN-ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 196 v~~v~~~p~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|+++.|.-.| +.-+++++.|..|.+=-.+...... ++.... .+..+..++..|..+ ++++++.
T Consensus 550 ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~------------~f~r~t~t~~ktTlYDm~Vdp~~k-~v~t~cQ 616 (1080)
T KOG1408|consen 550 ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGR------------LFPRHTQTLSKTTLYDMAVDPTSK-LVVTVCQ 616 (1080)
T ss_pred eeEEEEeecCCceEEEeccCchhhheehhccccCce------------eccccccccccceEEEeeeCCCcc-eEEEEec
Confidence 9999998766 3357899999888543222211110 111111 134689999999999 7889999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE 351 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~ 351 (437)
|..|+|||++++++.+.++....+.+..+.+...|.|.++++...|.+ +.++|..+|+++.++.||.+.
T Consensus 617 Drnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt-----------l~~~Df~sgEcvA~m~GHsE~ 685 (1080)
T KOG1408|consen 617 DRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT-----------LCFVDFVSGECVAQMTGHSEA 685 (1080)
T ss_pred ccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCc-----------eEEEEeccchhhhhhcCcchh
Confidence 999999999999999999988877788888999999999999999998 899999999999999999999
Q ss_pred ccccCCCCCCcccccc-------ccccCHHHHHH
Q psy4571 352 SSDRHSSDNDTEDLNS-------IWSMTDEQREY 378 (437)
Q Consensus 352 ~~~~~~~~~~~~~~~~-------~w~~~~~~~~~ 378 (437)
|+.+.|.+|-+.+.+. +|.+..+....
T Consensus 686 VTG~kF~nDCkHlISvsgDgCIFvW~lp~~mii~ 719 (1080)
T KOG1408|consen 686 VTGVKFLNDCKHLISVSGDGCIFVWKLPLTMIIR 719 (1080)
T ss_pred eeeeeecccchhheeecCCceEEEEECchhHhHH
Confidence 9999999998877653 89886655433
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=212.10 Aligned_cols=263 Identities=15% Similarity=0.171 Sum_probs=214.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeee------------cCCCceeEEEecCCCCe-EEEecCceEEEEEeeeccc---c
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWK------------KNTPFLYDLVVNNYVAN-ISCILNISILFFEIIFTQN---F 100 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~------------~~~~~~~~~~~~~~~~~-i~~~~~~~i~~~~~~~~~~---~ 100 (437)
|.++.|.+..+.+|+++++|+.|+||+ .|...+.++.|+..+.. ++++.|..+++||..+++. +
T Consensus 217 vsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 217 VSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred cchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEE
Confidence 445556634788999999999999999 35567888888777654 4899999999999988775 4
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.....++|+.|+|++.+.|++|+.|+.|+.||++ .++.++.+..|-+.|..+.|-++|.+ +++.+.|+++++|+.+
T Consensus 297 ~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR---s~kvvqeYd~hLg~i~~i~F~~~g~r-FissSDdks~riWe~~ 372 (503)
T KOG0282|consen 297 HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR---SGKVVQEYDRHLGAILDITFVDEGRR-FISSSDDKSVRIWENR 372 (503)
T ss_pred ecCCCceeeecCCCCCcEEEEecCCCcEEEEecc---chHHHHHHHhhhhheeeeEEccCCce-EeeeccCccEEEEEcC
Confidence 4667899999999887999999999999999999 66788888999999999999999997 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc--ccEEEEEE
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT--AKISDFSW 258 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~ 258 (437)
.+-........+.....++..+|+++ +++.-+.|+.|.++.+...-.... -..+++|. +.-..+.|
T Consensus 373 ~~v~ik~i~~~~~hsmP~~~~~P~~~-~~~aQs~dN~i~ifs~~~~~r~nk-----------kK~feGh~vaGys~~v~f 440 (503)
T KOG0282|consen 373 IPVPIKNIADPEMHTMPCLTLHPNGK-WFAAQSMDNYIAIFSTVPPFRLNK-----------KKRFEGHSVAGYSCQVDF 440 (503)
T ss_pred CCccchhhcchhhccCcceecCCCCC-eehhhccCceEEEEecccccccCH-----------hhhhcceeccCceeeEEE
Confidence 75432223333445567899999999 588889999999998765432221 12366775 34567899
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccCCCCc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASESPTPT 319 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~ 319 (437)
||||. +|++|+.||.+.+||-++.+.+..+.. +...++.+.|+|.-. -+|+++.+|.
T Consensus 441 SpDG~-~l~SGdsdG~v~~wdwkt~kl~~~lka---h~~~ci~v~wHP~e~Skvat~~w~G~ 498 (503)
T KOG0282|consen 441 SPDGR-TLCSGDSDGKVNFWDWKTTKLVSKLKA---HDQPCIGVDWHPVEPSKVATCGWDGL 498 (503)
T ss_pred cCCCC-eEEeecCCccEEEeechhhhhhhcccc---CCcceEEEEecCCCcceeEecccCce
Confidence 99999 888999999999999999888877765 456788889999664 7889999998
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=193.12 Aligned_cols=270 Identities=14% Similarity=0.194 Sum_probs=212.5
Q ss_pred cceeEEEEeeC--CCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCC-eEEEecCceEEEEEeeeccc
Q psy4571 34 IYRFYRLCVAE--PFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVA-NISCILNISILFFEIIFTQN 99 (437)
Q Consensus 34 ~~~v~~~~~~~--~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~~~ 99 (437)
.-.|..++|+. |++-.|++++.|+.=.+-+.+ .|.+.....+.... ..++..|-+-++||...+..
T Consensus 14 trpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgde 93 (334)
T KOG0278|consen 14 TRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDE 93 (334)
T ss_pred CcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhh
Confidence 34577788875 778899999999975554444 44444443322211 12455677899999877664
Q ss_pred ---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 100 ---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 100 ---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+.++.-|..++|+. +.++|++|+.+..+||||++.. ..+...+.+|++.|..+.|....+. |++++.|++||+
T Consensus 94 lhsf~hkhivk~~af~~-ds~~lltgg~ekllrvfdln~p--~App~E~~ghtg~Ir~v~wc~eD~~-iLSSadd~tVRL 169 (334)
T KOG0278|consen 94 LHSFEHKHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRP--KAPPKEISGHTGGIRTVLWCHEDKC-ILSSADDKTVRL 169 (334)
T ss_pred hhhhhhhheeeeEEecc-cchhhhccchHHHhhhhhccCC--CCCchhhcCCCCcceeEEEeccCce-EEeeccCCceEE
Confidence 56788899999999 6788999999999999999864 3567788899999999999987774 888899999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
||.+++.. ++.+. .+.+|+++.++++|+ +++-...+.|.+||..+....+. + .-...|.+.
T Consensus 170 WD~rTgt~-v~sL~-~~s~VtSlEvs~dG~--ilTia~gssV~Fwdaksf~~lKs--------------~-k~P~nV~SA 230 (334)
T KOG0278|consen 170 WDHRTGTE-VQSLE-FNSPVTSLEVSQDGR--ILTIAYGSSVKFWDAKSFGLLKS--------------Y-KMPCNVESA 230 (334)
T ss_pred EEeccCcE-EEEEe-cCCCCcceeeccCCC--EEEEecCceeEEeccccccceee--------------c-cCccccccc
Confidence 99999876 66664 578899999999998 34556678899999988765443 2 123468889
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+.+|+.. ++++|+.|..++.||..+++.+..+ ...+...+.++.|+|+|...++|+.||+ |++|..
T Consensus 231 SL~P~k~-~fVaGged~~~~kfDy~TgeEi~~~--nkgh~gpVhcVrFSPdGE~yAsGSEDGT-----------irlWQt 296 (334)
T KOG0278|consen 231 SLHPKKE-FFVAGGEDFKVYKFDYNTGEEIGSY--NKGHFGPVHCVRFSPDGELYASGSEDGT-----------IRLWQT 296 (334)
T ss_pred cccCCCc-eEEecCcceEEEEEeccCCceeeec--ccCCCCceEEEEECCCCceeeccCCCce-----------EEEEEe
Confidence 9999997 8999999999999999999887765 2346777888899999999999999999 677766
Q ss_pred hhhh
Q psy4571 337 LVCE 340 (437)
Q Consensus 337 ~~~~ 340 (437)
..++
T Consensus 297 ~~~~ 300 (334)
T KOG0278|consen 297 TPGK 300 (334)
T ss_pred cCCC
Confidence 6554
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=197.96 Aligned_cols=292 Identities=16% Similarity=0.198 Sum_probs=214.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCC----CceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----PFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
-..-+.+|+ ++|.+++|||.|..|||++.+- .....+........ .-- ..--+.+...|+++.
T Consensus 113 ~~cR~aafs-~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~-----hPv-------IRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 113 SPCRAAAFS-PDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQAR-----HPV-------IRTLYDHVDEVNDLD 179 (430)
T ss_pred cceeeeeeC-CCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccC-----Cce-------EeehhhccCccccee
Confidence 345567788 9999999999999999999642 12222211110000 000 011234667899999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee--E
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH--S 188 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~--~ 188 (437)
|+| .+.+|++|+.|++|+++|.......+-.+.++ ...+|.++.|+|.|.+ |+.|...-++++||+.+.+.-+. .
T Consensus 180 FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGef-llvgTdHp~~rlYdv~T~QcfvsanP 256 (430)
T KOG0640|consen 180 FHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEF-LLVGTDHPTLRLYDVNTYQCFVSANP 256 (430)
T ss_pred ecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCce-EEEecCCCceeEEeccceeEeeecCc
Confidence 999 68999999999999999998543222233332 3568999999999996 99999999999999999654222 2
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEE
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVIC 267 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~ 267 (437)
-..|.+.|+++.+++.++ +.++|+.||.|++||--+..++.+.. +.|. ..|.+..|..+|+ ++.
T Consensus 257 d~qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~-------------~AH~gsevcSa~Ftkn~k-yiL 321 (430)
T KOG0640|consen 257 DDQHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIG-------------NAHGGSEVCSAVFTKNGK-YIL 321 (430)
T ss_pred ccccccceeEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHH-------------hhcCCceeeeEEEccCCe-EEe
Confidence 246899999999999998 79999999999999988776665532 3453 4789999999999 666
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeec--ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSI--RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
+.+.|..+++|.+.++++++.+..... ...-...+.|.....++..-...... +--||..++..+..+
T Consensus 322 sSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~s----------lcsWdaRtadr~~l~ 391 (430)
T KOG0640|consen 322 SSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNS----------LCSWDARTADRVALL 391 (430)
T ss_pred ecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCc----------eeeccccchhhhhhc
Confidence 999999999999999999998875321 11112334566666666554433221 788999999887766
Q ss_pred -cCCCccccccCCCCCCcccccc
Q psy4571 346 -LGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 346 -~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.||.+.+..+..+|.+..++++
T Consensus 392 slgHn~a~R~i~HSP~~p~FmTc 414 (430)
T KOG0640|consen 392 SLGHNGAVRWIVHSPVEPAFMTC 414 (430)
T ss_pred ccCCCCCceEEEeCCCCCceeee
Confidence 8999999999999988766664
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=219.26 Aligned_cols=278 Identities=14% Similarity=0.183 Sum_probs=200.6
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCC------------CeE---------------EEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYV------------ANI---------------SCI 84 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~------------~~i---------------~~~ 84 (437)
.+.-.|-++.|+ ++|++||+|+.|+.||||..-......+...... ..+ .+.
T Consensus 265 ah~gaIw~mKFS-~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFS-HDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeC-CCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 556678889999 9999999999999999999654332222211100 000 000
Q ss_pred cCceEEEEEe------e-eccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 85 LNISILFFEI------I-FTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 85 ~~~~i~~~~~------~-~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
....+.+-+- . .-.-..|...|.++.||. .++|++++.|.+|++|++. ...++..| .|..-|+|++|
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~---~~~CL~~F-~HndfVTcVaF 417 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPG---RKECLKVF-SHNDFVTCVAF 417 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCC---CcceeeEE-ecCCeeEEEEe
Confidence 0001111110 0 001122455789999997 5788999999999999999 56677766 69999999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+|-..+.|++|+-||.|+||++...+ +.....-..-|++++|.|+|++ .+.|+.+|.+++|+....+..........
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~~--Vv~W~Dl~~lITAvcy~PdGk~-avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDKK--VVDWNDLRDLITAVCYSPDGKG-AVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred cccCCCcEeecccccceEEeecCcCe--eEeehhhhhhheeEEeccCCce-EEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 99666669999999999999999744 5555556688999999999996 88999999999999988765443111000
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
... ...|. .|+++.|.|.....++..+.|..|||+|.++...+..+.... ....-+.+.|+.||+++++++.|
T Consensus 495 ~~K-----k~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~-n~~SQ~~Asfs~Dgk~IVs~seD 567 (712)
T KOG0283|consen 495 NKK-----KKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFR-NTSSQISASFSSDGKHIVSASED 567 (712)
T ss_pred cCc-----cccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccc-cCCcceeeeEccCCCEEEEeecC
Confidence 000 11233 899999998776556678899999999998888888777543 33455778999999999999999
Q ss_pred Ccccccccccccccccccch
Q psy4571 318 PTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~ 337 (437)
.. +++|+..
T Consensus 568 s~-----------VYiW~~~ 576 (712)
T KOG0283|consen 568 SW-----------VYIWKND 576 (712)
T ss_pred ce-----------EEEEeCC
Confidence 88 6777763
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-25 Score=186.07 Aligned_cols=280 Identities=14% Similarity=0.123 Sum_probs=223.0
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.+.-+.|+ .++++|.+++.|.+..+|-...|....... .|..+|.|+..+. +
T Consensus 12 plTqiKyN-~eGDLlFscaKD~~~~vw~s~nGerlGty~--------------------------GHtGavW~~Did~-~ 63 (327)
T KOG0643|consen 12 PLTQIKYN-REGDLLFSCAKDSTPTVWYSLNGERLGTYD--------------------------GHTGAVWCCDIDW-D 63 (327)
T ss_pred ccceEEec-CCCcEEEEecCCCCceEEEecCCceeeeec--------------------------CCCceEEEEEecC-C
Confidence 35567888 999999999999999999987777766532 2345667777777 5
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-----CCCeEEEEeCCC------Cce
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-----ADKTVALWDLRN------LKL 184 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-----~dg~i~lwd~~~------~~~ 184 (437)
...+++|+.|.++++||++ .++++..++ ...+|..+.|+++|.. ++... ..+.|.++|++. .+.
T Consensus 64 s~~liTGSAD~t~kLWDv~---tGk~la~~k-~~~~Vk~~~F~~~gn~-~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~e 138 (327)
T KOG0643|consen 64 SKHLITGSADQTAKLWDVE---TGKQLATWK-TNSPVKRVDFSFGGNL-ILASTDKQMGYTCFVSVFDIRDDSSDIDSEE 138 (327)
T ss_pred cceeeeccccceeEEEEcC---CCcEEEEee-cCCeeEEEeeccCCcE-EEEEehhhcCcceEEEEEEccCChhhhcccC
Confidence 7889999999999999999 567777765 3668999999999985 44333 357799999983 244
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
|...+..+...++.+-|.|-+++ +++|..||.|.+||++++.. .+.....|...|+.++++||..
T Consensus 139 p~~kI~t~~skit~a~Wg~l~~~-ii~Ghe~G~is~~da~~g~~-------------~v~s~~~h~~~Ind~q~s~d~T- 203 (327)
T KOG0643|consen 139 PYLKIPTPDSKITSALWGPLGET-IIAGHEDGSISIYDARTGKE-------------LVDSDEEHSSKINDLQFSRDRT- 203 (327)
T ss_pred ceEEecCCccceeeeeecccCCE-EEEecCCCcEEEEEcccCce-------------eeechhhhccccccccccCCcc-
Confidence 56777778899999999999995 89999999999999998743 2334567888999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc---cccccchhhhh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG---LVLFDILVCEE 341 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~---i~~wd~~~~~~ 341 (437)
++++++.|.+-++||+++.+.++++... ..+.+++++|.-..++.|+......+-....... -+++++...++
T Consensus 204 ~FiT~s~Dttakl~D~~tl~v~Kty~te----~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEE 279 (327)
T KOG0643|consen 204 YFITGSKDTTAKLVDVRTLEVLKTYTTE----RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEE 279 (327)
T ss_pred eEEecccCccceeeeccceeeEEEeeec----ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHH
Confidence 7889999999999999999999888753 4556678999888777776543333222221111 57899999999
Q ss_pred hhhhcCCCccccccCCCCCCcccccc
Q psy4571 342 QRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+..++||..+++.++++|+|...++.
T Consensus 280 igrvkGHFGPINsvAfhPdGksYsSG 305 (327)
T KOG0643|consen 280 IGRVKGHFGPINSVAFHPDGKSYSSG 305 (327)
T ss_pred hccccccccCcceeEECCCCcccccC
Confidence 99999999999999999999866654
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=220.17 Aligned_cols=242 Identities=17% Similarity=0.220 Sum_probs=190.3
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC-------------------------------------------
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN------------------------------------------- 137 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~------------------------------------------- 137 (437)
.|..+|.++.||+ +|++||+|+.||.|+||.+...+
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 5788999999999 79999999999999999876500
Q ss_pred --------------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 138 --------------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 138 --------------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
..+++..+.||.+.|.+|.|+.++ +|++++.|.+|+||++.. +.++..+. |.+-|+||+|+|
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~-~~CL~~F~-HndfVTcVaFnP 419 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGR-KECLKVFS-HNDFVTCVAFNP 419 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCC-cceeeEEe-cCCeeEEEEecc
Confidence 134556778999999999999865 599999999999999997 55577774 999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.+...|++|+.||+||||++...+. .....-..-|++++|.|+|+ ..+.|+.+|.+++|+....
T Consensus 420 vDDryFiSGSLD~KvRiWsI~d~~V---------------v~W~Dl~~lITAvcy~PdGk-~avIGt~~G~C~fY~t~~l 483 (712)
T KOG0283|consen 420 VDDRYFISGSLDGKVRLWSISDKKV---------------VDWNDLRDLITAVCYSPDGK-GAVIGTFNGYCRFYDTEGL 483 (712)
T ss_pred cCCCcEeecccccceEEeecCcCee---------------EeehhhhhhheeEEeccCCc-eEEEEEeccEEEEEEccCC
Confidence 7766799999999999999987532 22333447899999999999 6789999999999999988
Q ss_pred CCceeeeeeec-----ccCCceeeeecCCCC-cccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccccc--
Q psy4571 284 SDTKTMRLDSI-----RSNGGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDR-- 355 (437)
Q Consensus 284 ~~~~~~~~~~~-----~~~~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~-- 355 (437)
+.......... .+..++.+.+.|... -+.+.+.|.. |||+|..+.+++..++|+....++.
T Consensus 484 k~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSr-----------IRI~d~~~~~lv~KfKG~~n~~SQ~~A 552 (712)
T KOG0283|consen 484 KLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSR-----------IRIYDGRDKDLVHKFKGFRNTSSQISA 552 (712)
T ss_pred eEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCc-----------eEEEeccchhhhhhhcccccCCcceee
Confidence 76665554322 122344455544332 3555566666 8999999999999999987766644
Q ss_pred CCCCCCcccccc-------ccccCHH
Q psy4571 356 HSSDNDTEDLNS-------IWSMTDE 374 (437)
Q Consensus 356 ~~~~~~~~~~~~-------~w~~~~~ 374 (437)
.|+.||..+... +|++...
T Consensus 553 sfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 553 SFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred eEccCCCEEEEeecCceEEEEeCCCC
Confidence 477799887765 8887443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=201.94 Aligned_cols=273 Identities=13% Similarity=0.144 Sum_probs=210.0
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+..+...|-.+.|+ ++|+++|++|.|.+.-+|..-...-+.+.. ....+..+|..+
T Consensus 220 l~~htdEVWfl~FS-~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~-----------------------tlvgh~~~V~yi 275 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFS-HNGKYLASASKDSTAIIWIVVYDVHFKLKK-----------------------TLVGHSQPVSYI 275 (519)
T ss_pred HhhCCCcEEEEEEc-CCCeeEeeccCCceEEEEEEecCcceeeee-----------------------eeecccCceEEE
Confidence 44556677889999 999999999999999999853322222211 012355788999
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
.||| ++++|++++.|..+.+||+.+++ ....+ .+|...+.+++|.|||.. +++|+.|+.+..||++... ...
T Consensus 276 ~wSP-DdryLlaCg~~e~~~lwDv~tgd---~~~~y~~~~~~S~~sc~W~pDg~~-~V~Gs~dr~i~~wdlDgn~--~~~ 348 (519)
T KOG0293|consen 276 MWSP-DDRYLLACGFDEVLSLWDVDTGD---LRHLYPSGLGFSVSSCAWCPDGFR-FVTGSPDRTIIMWDLDGNI--LGN 348 (519)
T ss_pred EECC-CCCeEEecCchHheeeccCCcch---hhhhcccCcCCCcceeEEccCCce-eEecCCCCcEEEecCCcch--hhc
Confidence 9999 67888889999999999999654 33222 245678999999999997 9999999999999998633 334
Q ss_pred eccCC-CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 189 FESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 189 ~~~h~-~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
.++-. ..|.+++..+||++ +++.+.|..|++++........ ......+|++++.+.+++ ++.
T Consensus 349 W~gvr~~~v~dlait~Dgk~-vl~v~~d~~i~l~~~e~~~dr~---------------lise~~~its~~iS~d~k-~~L 411 (519)
T KOG0293|consen 349 WEGVRDPKVHDLAITYDGKY-VLLVTVDKKIRLYNREARVDRG---------------LISEEQPITSFSISKDGK-LAL 411 (519)
T ss_pred ccccccceeEEEEEcCCCcE-EEEEecccceeeechhhhhhhc---------------cccccCceeEEEEcCCCc-EEE
Confidence 44332 45999999999997 5555689999999987754322 123346899999999999 666
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
+.-.+..+++||++..+.++.+.+... ..-.+..+|. -+..++++||.|+. |++|+-.+|+++..+.
T Consensus 412 vnL~~qei~LWDl~e~~lv~kY~Ghkq-~~fiIrSCFgg~~~~fiaSGSED~k-----------vyIWhr~sgkll~~Ls 479 (519)
T KOG0293|consen 412 VNLQDQEIHLWDLEENKLVRKYFGHKQ-GHFIIRSCFGGGNDKFIASGSEDSK-----------VYIWHRISGKLLAVLS 479 (519)
T ss_pred EEcccCeeEEeecchhhHHHHhhcccc-cceEEEeccCCCCcceEEecCCCce-----------EEEEEccCCceeEeec
Confidence 777899999999998887777765442 2233444553 45589999999998 8999999999999999
Q ss_pred CCCccccccCCCCCCc
Q psy4571 347 GTEEESSDRHSSDNDT 362 (437)
Q Consensus 347 ~h~~~~~~~~~~~~~~ 362 (437)
||...+++++++|...
T Consensus 480 GHs~~vNcVswNP~~p 495 (519)
T KOG0293|consen 480 GHSKTVNCVSWNPADP 495 (519)
T ss_pred CCcceeeEEecCCCCH
Confidence 9999999999998554
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=188.67 Aligned_cols=247 Identities=18% Similarity=0.232 Sum_probs=188.7
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe-eCCCCCEEEEEE
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW-HLLHESLFGSVA 123 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~-sp~~~~~l~~~~ 123 (437)
-++++|+|++.|++|||+.........+.. ....+..+|..++| +|.-+.+||+++
T Consensus 21 yygkrlATcsSD~tVkIf~v~~n~~s~ll~-----------------------~L~Gh~GPVwqv~wahPk~G~iLAScs 77 (299)
T KOG1332|consen 21 YYGKRLATCSSDGTVKIFEVRNNGQSKLLA-----------------------ELTGHSGPVWKVAWAHPKFGTILASCS 77 (299)
T ss_pred hhcceeeeecCCccEEEEEEcCCCCceeee-----------------------EecCCCCCeeEEeecccccCcEeeEee
Confidence 558899999999999999865433211110 01124578889999 677799999999
Q ss_pred CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC-CcEEEEEeCCCeEEEEeCCCC-ce-eeeEeccCCCceEEEE
Q psy4571 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS-EYILATGSADKTVALWDLRNL-KL-KLHSFESHKDEIFQVQ 200 (437)
Q Consensus 124 ~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~sgs~dg~i~lwd~~~~-~~-~~~~~~~h~~~v~~v~ 200 (437)
.||.|.||.-+.+ ..........|...|++++|.|.+ ..+|++++.||.|.+.+.+.. .. .......|.-.|++++
T Consensus 78 YDgkVIiWke~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVs 156 (299)
T KOG1332|consen 78 YDGKVIIWKEENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVS 156 (299)
T ss_pred cCceEEEEecCCC-chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceee
Confidence 9999999998865 455667778899999999999853 236899999999999999874 21 1334568999999999
Q ss_pred EcCC---C----------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC---Ce
Q psy4571 201 WSPH---N----------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE---PW 264 (437)
Q Consensus 201 ~~p~---~----------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~~ 264 (437)
|.|- | .+-|++|+.|..|+||+.....-.. -.++.+|.+.|+.++|.|.- +.
T Consensus 157 wapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~------------e~~l~~H~dwVRDVAwaP~~gl~~s 224 (299)
T KOG1332|consen 157 WAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL------------ERTLEGHKDWVRDVAWAPSVGLPKS 224 (299)
T ss_pred ecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhh------------hhhhhhcchhhhhhhhccccCCCce
Confidence 9986 3 1248999999999999998864322 24488999999999999964 35
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY 327 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~ 327 (437)
.+++++.||++.||..+.........+..........+.||+.|.+|+.++.|..+.+|..+.
T Consensus 225 ~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 225 TIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred eeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 799999999999998874322222222222456677889999999999999999977765553
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-26 Score=218.39 Aligned_cols=256 Identities=22% Similarity=0.269 Sum_probs=212.1
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
+....+.+..|. ...+.+|+.|.++++|+..++......+.+ +...|.++++
T Consensus 206 ~~~~~~~~~q~~---~~~~~~~s~~~tl~~~~~~~~~~i~~~l~G-------------------------H~g~V~~l~~ 257 (537)
T KOG0274|consen 206 TDDHVVLCLQLH---DGFFKSGSDDSTLHLWDLNNGYLILTRLVG-------------------------HFGGVWGLAF 257 (537)
T ss_pred cCcchhhhheee---cCeEEecCCCceeEEeecccceEEEeeccC-------------------------CCCCceeEEE
Confidence 345556666666 678889999999999998777665543333 3467788888
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
.. .++++++|+.|.++++||.. .+.+...+.+|.+.|.++...+. .+++|+.|.+|++|++.++.. +..+.+
T Consensus 258 ~~-~~~~lvsgS~D~t~rvWd~~---sg~C~~~l~gh~stv~~~~~~~~---~~~sgs~D~tVkVW~v~n~~~-l~l~~~ 329 (537)
T KOG0274|consen 258 PS-GGDKLVSGSTDKTERVWDCS---TGECTHSLQGHTSSVRCLTIDPF---LLVSGSRDNTVKVWDVTNGAC-LNLLRG 329 (537)
T ss_pred ec-CCCEEEEEecCCcEEeEecC---CCcEEEEecCCCceEEEEEccCc---eEeeccCCceEEEEeccCcce-EEEecc
Confidence 77 78999999999999999988 67889999999999999987642 588999999999999998665 888888
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|.++|+++..+ +. ++++|+.|++|++||+.++ +++..+.+|...|.++.+.+. + .+++|+.
T Consensus 330 h~~~V~~v~~~--~~-~lvsgs~d~~v~VW~~~~~--------------~cl~sl~gH~~~V~sl~~~~~-~-~~~Sgs~ 390 (537)
T KOG0274|consen 330 HTGPVNCVQLD--EP-LLVSGSYDGTVKVWDPRTG--------------KCLKSLSGHTGRVYSLIVDSE-N-RLLSGSL 390 (537)
T ss_pred ccccEEEEEec--CC-EEEEEecCceEEEEEhhhc--------------eeeeeecCCcceEEEEEecCc-c-eEEeeee
Confidence 99999999998 54 6999999999999999976 445668999999999988765 4 6889999
Q ss_pred CCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC-CC
Q psy4571 272 DNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG-TE 349 (437)
Q Consensus 272 dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-h~ 349 (437)
|++|++||+++. +++..+.. ...........++++.+++.|++ |++||..++++++.+.+ |.
T Consensus 391 D~~IkvWdl~~~~~c~~tl~~-----h~~~v~~l~~~~~~Lvs~~aD~~-----------Ik~WD~~~~~~~~~~~~~~~ 454 (537)
T KOG0274|consen 391 DTTIKVWDLRTKRKCIHTLQG-----HTSLVSSLLLRDNFLVSSSADGT-----------IKLWDAEEGECLRTLEGRHV 454 (537)
T ss_pred ccceEeecCCchhhhhhhhcC-----CcccccccccccceeEecccccc-----------EEEeecccCceeeeeccCCc
Confidence 999999999999 88877764 22223556678899999999998 89999999999999999 66
Q ss_pred ccccccCCC
Q psy4571 350 EESSDRHSS 358 (437)
Q Consensus 350 ~~~~~~~~~ 358 (437)
..+..+.+.
T Consensus 455 ~~v~~l~~~ 463 (537)
T KOG0274|consen 455 GGVSALALG 463 (537)
T ss_pred ccEEEeecC
Confidence 667777665
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=204.84 Aligned_cols=266 Identities=15% Similarity=0.196 Sum_probs=208.8
Q ss_pred CceeEEEecCCCC-eEEEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 67 PFLYDLVVNNYVA-NISCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 67 ~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
..+..+.++|... .++....-.+.+++...... ..|...+.++.|-. ++.+||+|...|.|+|+|.. ....
T Consensus 27 ~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~-DG~LlaaGD~sG~V~vfD~k---~r~i 102 (487)
T KOG0310|consen 27 NSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRS-DGRLLAAGDESGHVKVFDMK---SRVI 102 (487)
T ss_pred CcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeec-CCeEEEccCCcCcEEEeccc---cHHH
Confidence 4466777777544 34566667899998664432 34788999999998 79999999999999999966 3456
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEE
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vw 221 (437)
++.+.+|+.+|..+.|+|++..+|++|+.|+.+++||+.+... ...+.+|++.|.|.+|+|..+++++|||.||+|++|
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 7888999999999999999888899999999999999998664 557889999999999999988899999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCcee
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGIS 301 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (437)
|++..... +. --.|..+|..+.+-|.|. ++++++.+ .+++||+.+|.+.-... ..|+..+++
T Consensus 182 DtR~~~~~-------------v~-elnhg~pVe~vl~lpsgs-~iasAgGn-~vkVWDl~~G~qll~~~--~~H~KtVTc 243 (487)
T KOG0310|consen 182 DTRSLTSR-------------VV-ELNHGCPVESVLALPSGS-LIASAGGN-SVKVWDLTTGGQLLTSM--FNHNKTVTC 243 (487)
T ss_pred EeccCCce-------------eE-EecCCCceeeEEEcCCCC-EEEEcCCC-eEEEEEecCCceehhhh--hcccceEEE
Confidence 99986421 11 236788999999999999 78777655 79999999775443322 226788899
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+.+..+++.|.+|+-|+.+++++...++.+.-|... +++..+..+|+++.+..+
T Consensus 244 L~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~------------~pvLsiavs~dd~t~viG 297 (487)
T KOG0310|consen 244 LRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYP------------GPVLSIAVSPDDQTVVIG 297 (487)
T ss_pred EEeecCCceEeecccccceEEEEccceEEEEeeecc------------cceeeEEecCCCceEEEe
Confidence 999999999999999999544444444444333332 467777778876655443
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=221.23 Aligned_cols=270 Identities=21% Similarity=0.283 Sum_probs=206.9
Q ss_pred cccccceeEEEEeeCCCcceEEEee--ccCceEeeecCCCceeEEEe--cCC-CCeEEEecCceEEEEEeeeccccccCC
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERV--INEEYKIWKKNTPFLYDLVV--NNY-VANISCILNISILFFEIIFTQNFPFPL 104 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs--~d~~v~iw~~~~~~~~~~~~--~~~-~~~i~~~~~~~i~~~~~~~~~~~~~~~ 104 (437)
+.|....++++..+ |++..++||+ .|+.++||+... +.+-.. ... ...+. ....|..
T Consensus 9 v~H~~~~IfSIdv~-pdg~~~aTgGq~~d~~~~iW~~~~--vl~~~~~~~~~l~k~l~---------------~m~~h~~ 70 (942)
T KOG0973|consen 9 VNHNEKSIFSIDVH-PDGVKFATGGQVLDGGIVIWSQDP--VLDEKEEKNENLPKHLC---------------TMDDHDG 70 (942)
T ss_pred cccCCeeEEEEEec-CCceeEecCCccccccceeecccc--ccchhhhhhcccchhhe---------------eeccccC
Confidence 45666668899999 9999999999 999999999642 111110 000 01111 1123567
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCC----C-----------CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRS----H-----------NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~----~-----------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.|+|+.|+| ++.+||+|+.|+.|.||.... . +..+.+..+.+|.+.|..++|+|++. +|++++
T Consensus 71 sv~CVR~S~-dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s 148 (942)
T KOG0973|consen 71 SVNCVRFSP-DGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVS 148 (942)
T ss_pred ceeEEEECC-CCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEec
Confidence 899999999 799999999999999999872 0 12346778899999999999999999 599999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC---------------
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--------------- 234 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--------------- 234 (437)
.|++|.+|+.++. ..+..+++|.+.|..+.|.|-|++ ||+-+.|++|+||++..-+.......
T Consensus 149 ~DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky-~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlS 226 (942)
T KOG0973|consen 149 LDNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGKY-FASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLS 226 (942)
T ss_pred ccceEEEEccccc-eeeeeeecccccccceEECCccCe-eeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecc
Confidence 9999999999998 559999999999999999999996 99999999999999765332222111
Q ss_pred ------------C-----------CCCCCceEEEecCccccEEEEEEccC--------C-------C-eEEEEEeCCCeE
Q psy4571 235 ------------A-----------EDGPPELLFIHGGHTAKISDFSWNPN--------E-------P-WVICSVSEDNIM 275 (437)
Q Consensus 235 ------------~-----------~~~~~~~~~~~~~h~~~v~~l~~~p~--------~-------~-~~l~s~~~dg~i 275 (437)
. ..+.++.-..+-||..++.++.|+|. | . .++|+|+.|++|
T Consensus 227 WSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSl 306 (942)
T KOG0973|consen 227 WSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSL 306 (942)
T ss_pred cCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccE
Confidence 0 01112223346689999999999981 1 1 178999999999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.||.....+++..+ .......+..++|+|||..|.++|.||++.+.
T Consensus 307 SVW~T~~~RPl~vi--~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 307 SVWNTALPRPLFVI--HNLFNKSIVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred EEEecCCCCchhhh--hhhhcCceeeeeEcCCCCeEEEEecCCeEEEE
Confidence 99998766665444 33456778889999999999999999996554
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=190.28 Aligned_cols=255 Identities=13% Similarity=0.132 Sum_probs=197.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
...|.+++|||....++++|+.||+||+|+++..+.... +....|.++|.+++|+.+|.. +++|+.|+.+++||+.++
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-ka~~~~~~PvL~v~Wsddgsk-Vf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-KAQQSHDGPVLDVCWSDDGSK-VFSGGCDKQAKLWDLASG 104 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccc-hhhhccCCCeEEEEEccCCce-EEeeccCCceEEEEccCC
Confidence 357899999998888898999999999999986433333 556689999999999999985 999999999999999996
Q ss_pred ceeeeEeccCCCceEEEEEcCCCC-cEEEEEeCCCeEEEEEcCCCCCCCCCCCCC----------------CCCCceEEE
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAE----------------DGPPELLFI 245 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~----------------~~~~~~~~~ 245 (437)
+ ...+..|.++|.++.|-+... .+|+|||.|++|+.||++......++.... ....-.+..
T Consensus 105 Q--~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vyn 182 (347)
T KOG0647|consen 105 Q--VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYN 182 (347)
T ss_pred C--eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEE
Confidence 4 677888999999999987543 278999999999999999876654432100 000001111
Q ss_pred e-------c----CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce--eeeeeecc------cCCceeeeecC
Q psy4571 246 H-------G----GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK--TMRLDSIR------SNGGISSTASP 306 (437)
Q Consensus 246 ~-------~----~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~------~~~~~~~~~s~ 306 (437)
+ + .-+-.++||+..++.+ ..+.|+-.|.+.+..+..+.+.. .++.++.. ...+..++|+|
T Consensus 183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~-~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP 261 (347)
T KOG0647|consen 183 LENPPTEFKRIESPLKWQTRCVACFQDKD-GFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP 261 (347)
T ss_pred cCCCcchhhhhcCcccceeeEEEEEecCC-ceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec
Confidence 1 1 1233588999999988 56899999999999999874433 44433311 11234559999
Q ss_pred CCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-ccccCH
Q psy4571 307 TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-IWSMTD 373 (437)
Q Consensus 307 ~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-~w~~~~ 373 (437)
....|++++.||+ +.+||-.....++....|..++++..|+.+|..++-. -+++..
T Consensus 262 ~hgtlvTaGsDGt-----------f~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~gYDWSk 318 (347)
T KOG0647|consen 262 VHGTLVTAGSDGT-----------FSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYALGYDWSK 318 (347)
T ss_pred ccceEEEecCCce-----------EEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEeeccccc
Confidence 9999999999999 7999999999999999999999999999999876654 355533
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=210.18 Aligned_cols=217 Identities=15% Similarity=0.192 Sum_probs=157.7
Q ss_pred cceeEEEEeeCC-CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 34 IYRFYRLCVAEP-FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 34 ~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
.-.|.+++|+ | ++.+|++|+.|++|++|+...+..... ....+ .....+...|.+++|+
T Consensus 75 ~~~V~~v~fs-P~d~~~LaSgS~DgtIkIWdi~~~~~~~~----~~~~l---------------~~L~gH~~~V~~l~f~ 134 (493)
T PTZ00421 75 EGPIIDVAFN-PFDPQKLFTASEDGTIMGWGIPEEGLTQN----ISDPI---------------VHLQGHTKKVGIVSFH 134 (493)
T ss_pred CCCEEEEEEc-CCCCCEEEEEeCCCEEEEEecCCCccccc----cCcce---------------EEecCCCCcEEEEEeC
Confidence 3457777777 5 566777777777777777654321100 00000 0012356789999999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
|.++++|++|+.|++|+|||+. ....+..+.+|...|.+++|+|++. +|++|+.|++|++||+++++. +..+.+|
T Consensus 135 P~~~~iLaSgs~DgtVrIWDl~---tg~~~~~l~~h~~~V~sla~spdG~-lLatgs~Dg~IrIwD~rsg~~-v~tl~~H 209 (493)
T PTZ00421 135 PSAMNVLASAGADMVVNVWDVE---RGKAVEVIKCHSDQITSLEWNLDGS-LLCTTSKDKKLNIIDPRDGTI-VSSVEAH 209 (493)
T ss_pred cCCCCEEEEEeCCCEEEEEECC---CCeEEEEEcCCCCceEEEEEECCCC-EEEEecCCCEEEEEECCCCcE-EEEEecC
Confidence 9666899999999999999998 4566778889999999999999998 599999999999999999665 7778888
Q ss_pred CCc-eEEEEEcCCCCcEEEEE---eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-CccccEEEEEEccCCCeEEE
Q psy4571 193 KDE-IFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 193 ~~~-v~~v~~~p~~~~~l~sg---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~ 267 (437)
.+. +..+.|.|++..++.+| +.|+.|++||++...... .... .+...+....|+++++ +++
T Consensus 210 ~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~-------------~~~~~d~~~~~~~~~~d~d~~-~L~ 275 (493)
T PTZ00421 210 ASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPY-------------STVDLDQSSALFIPFFDEDTN-LLY 275 (493)
T ss_pred CCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCce-------------eEeccCCCCceEEEEEcCCCC-EEE
Confidence 765 45778999887544444 348999999998754221 1122 2234566677899999 555
Q ss_pred EEe-CCCeEEEEeCCCCCCceee
Q psy4571 268 SVS-EDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 268 s~~-~dg~i~iwd~~~~~~~~~~ 289 (437)
+++ .|+.|++||+.+++.....
T Consensus 276 lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 276 IGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEeCCCeEEEEEeeCCceEEEe
Confidence 665 6999999999988765543
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=215.08 Aligned_cols=286 Identities=20% Similarity=0.276 Sum_probs=216.4
Q ss_pred ecCCCCeEEEecCceEEEEEeee-----------ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe
Q psy4571 74 VNNYVANISCILNISILFFEIIF-----------TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS 142 (437)
Q Consensus 74 ~~~~~~~i~~~~~~~i~~~~~~~-----------~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 142 (437)
.......+.+.+...++++.... ..+.....++.++.|+....++||+++..|.|.+||+......+.+
T Consensus 47 ~nr~~~qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l 126 (839)
T KOG0269|consen 47 VNRDINQIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLL 126 (839)
T ss_pred ecCCcceeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCccccchhh
Confidence 34555556666666666665332 1222334578899999888999999999999999999864445677
Q ss_pred eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 143 ~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
..+..|+..++++.|++...++|++|+.||+|++||++..+. ..++.+....|..+.|+|...+.|+++...|.+.+||
T Consensus 127 ~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S-~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWD 205 (839)
T KOG0269|consen 127 TVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS-KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWD 205 (839)
T ss_pred hHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc-cccccccchhhhceeeccCCCceEEEecCCceEEEee
Confidence 788999999999999999999999999999999999998665 7777788889999999998777899999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
++... ++...+.+|.++|.++.|+|++. +|||||.|+.|+|||..+.+......... ...+..+
T Consensus 206 lRqp~-------------r~~~k~~AH~GpV~c~nwhPnr~-~lATGGRDK~vkiWd~t~~~~~~~~tInT--iapv~rV 269 (839)
T KOG0269|consen 206 LRQPD-------------RCEKKLTAHNGPVLCLNWHPNRE-WLATGGRDKMVKIWDMTDSRAKPKHTINT--IAPVGRV 269 (839)
T ss_pred ccCch-------------hHHHHhhcccCceEEEeecCCCc-eeeecCCCccEEEEeccCCCccceeEEee--cceeeee
Confidence 99854 33455789999999999999887 89999999999999999776554444322 2334556
Q ss_pred eecCCCC-cccccCCCCcccccccccccccccccchhh-hhhhhhcCCCccccccCCCCCCccccccccccCHHHHHH--
Q psy4571 303 TASPTAS-STASESPTPTNSVHEKNYWQGLVLFDILVC-EEQRQLLGTEEESSDRHSSDNDTEDLNSIWSMTDEQREY-- 378 (437)
Q Consensus 303 ~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-- 378 (437)
.|-|..+ .||+++.-. +.+ |+|||+... -..+++..|.+.++.+++..... ..+|+..+....+
T Consensus 270 kWRP~~~~hLAtcsmv~-----dts----V~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~---~~l~s~sKD~tv~qh 337 (839)
T KOG0269|consen 270 KWRPARSYHLATCSMVV-----DTS----VHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDR---INLWSCSKDGTVLQH 337 (839)
T ss_pred eeccCccchhhhhhccc-----cce----EEEEeeccccccceeeeccCccccceeccCCCc---eeeEeecCccHHHHh
Confidence 8888776 455544211 112 999999764 34467799999999998877444 4578875443221
Q ss_pred -HHHhhhcccc
Q psy4571 379 -YKTQFHNLQR 388 (437)
Q Consensus 379 -~~~~f~~~~~ 388 (437)
+++.+..+.+
T Consensus 338 ~~knat~pid~ 348 (839)
T KOG0269|consen 338 LFKNATTPIDL 348 (839)
T ss_pred hhhcccChhhh
Confidence 4444444443
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-25 Score=182.64 Aligned_cols=264 Identities=13% Similarity=0.160 Sum_probs=214.2
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-------------CCCceeEEEecCCCC--eEEEecCceEEEE
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-------------NTPFLYDLVVNNYVA--NISCILNISILFF 92 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-------------~~~~~~~~~~~~~~~--~i~~~~~~~i~~~ 92 (437)
....-+.-.|.+++|+ .++..+++|+.|+++++|+. |++.+.++.|.+... ..++.+|.+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn-~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWN-CDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEc-ccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence 3344555668889999 99999999999999999993 455677777766554 3377889999999
Q ss_pred Eeeeccccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 93 EIIFTQNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 93 ~~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
|...++... .+..-.-+.|+| ++.+++++..|..|...|.+ ..+..... ...-.+..++|+.++. +++.-.
T Consensus 93 d~r~~k~~~~i~~~~eni~i~wsp-~g~~~~~~~kdD~it~id~r---~~~~~~~~-~~~~e~ne~~w~~~nd-~Fflt~ 166 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENINITWSP-DGEYIAVGNKDDRITFIDAR---TYKIVNEE-QFKFEVNEISWNNSND-LFFLTN 166 (313)
T ss_pred EeccCcEEEEeeccCcceEEEEcC-CCCEEEEecCcccEEEEEec---ccceeehh-cccceeeeeeecCCCC-EEEEec
Confidence 987766433 344556789999 68899999999999999998 33443333 3345688899997776 466666
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.-|+|.|......+ ++..+++|.....||.|+|+|++ ||+|+.|-.+-+||+...-+ ++.+..+
T Consensus 167 GlG~v~ILsypsLk-pv~si~AH~snCicI~f~p~Gry-fA~GsADAlvSLWD~~ELiC--------------~R~isRl 230 (313)
T KOG1407|consen 167 GLGCVEILSYPSLK-PVQSIKAHPSNCICIEFDPDGRY-FATGSADALVSLWDVDELIC--------------ERCISRL 230 (313)
T ss_pred CCceEEEEeccccc-cccccccCCcceEEEEECCCCce-EeeccccceeeccChhHhhh--------------heeeccc
Confidence 67999999988755 48899999999999999999996 99999999999999987643 3457788
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.-+|+.++|+.+|+ +||++|.|..|-|=++++|..+..++. ......++|+|...+||-+..|..
T Consensus 231 dwpVRTlSFS~dg~-~lASaSEDh~IDIA~vetGd~~~eI~~----~~~t~tVAWHPk~~LLAyA~ddk~ 295 (313)
T KOG1407|consen 231 DWPVRTLSFSHDGR-MLASASEDHFIDIAEVETGDRVWEIPC----EGPTFTVAWHPKRPLLAYACDDKD 295 (313)
T ss_pred cCceEEEEeccCcc-eeeccCccceEEeEecccCCeEEEeec----cCCceeEEecCCCceeeEEecCCC
Confidence 89999999999999 899999999999999999998887763 455667899999999998887754
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=205.56 Aligned_cols=275 Identities=15% Similarity=0.196 Sum_probs=214.1
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
..+...|..+-|- ++.+.|+||+.|..|++|+..+++. .+. .. +. ....+++++.
T Consensus 172 d~h~gev~~v~~l-~~sdtlatgg~Dr~Ik~W~v~~~k~-~~~--~t---La------------------Gs~g~it~~d 226 (459)
T KOG0288|consen 172 DAHEGEVHDVEFL-RNSDTLATGGSDRIIKLWNVLGEKS-ELI--ST---LA------------------GSLGNITSID 226 (459)
T ss_pred hccccccceeEEc-cCcchhhhcchhhhhhhhhcccchh-hhh--hh---hh------------------ccCCCcceee
Confidence 4456677778888 8888999999999999999776551 110 00 00 0124678999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|.+ ++..+++++.|+.+++|++. ..+...++.+|++.|+++.|...... +++|+.|.+|++||+..... ..++.
T Consensus 227 ~d~-~~~~~iAas~d~~~r~Wnvd---~~r~~~TLsGHtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~k~~C-~kt~l 300 (459)
T KOG0288|consen 227 FDS-DNKHVIAASNDKNLRLWNVD---SLRLRHTLSGHTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQKAYC-SKTVL 300 (459)
T ss_pred ecC-CCceEEeecCCCceeeeecc---chhhhhhhcccccceeeehhhccccc-eeeccccchhhhhhhhhhhe-ecccc
Confidence 999 57788889999999999999 67888999999999999999987775 99999999999999998444 44433
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
....+..|..++ . .+++|..|++|++||.+....... ...+ +.|+++..+++|.. +.+++
T Consensus 301 -~~S~cnDI~~~~--~-~~~SgH~DkkvRfwD~Rs~~~~~s--------------v~~g-g~vtSl~ls~~g~~-lLsss 360 (459)
T KOG0288|consen 301 -PGSQCNDIVCSI--S-DVISGHFDKKVRFWDIRSADKTRS--------------VPLG-GRVTSLDLSMDGLE-LLSSS 360 (459)
T ss_pred -ccccccceEecc--e-eeeecccccceEEEeccCCceeeE--------------eecC-cceeeEeeccCCeE-Eeeec
Confidence 234556666653 2 588999999999999998755443 4444 48999999999995 55779
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecc-cCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIR-SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.|.++.+.|+++.+..+.+...... ......+.|||++.|+++|+.||. +++|++.+|++...+....
T Consensus 361 RDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgs-----------v~iW~v~tgKlE~~l~~s~ 429 (459)
T KOG0288|consen 361 RDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGS-----------VYIWSVFTGKLEKVLSLST 429 (459)
T ss_pred CCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCc-----------EEEEEccCceEEEEeccCC
Confidence 9999999999998877777643322 233566799999999999999999 8999999999988885544
Q ss_pred c--cccccCCCCCCcccccc
Q psy4571 350 E--ESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 350 ~--~~~~~~~~~~~~~~~~~ 367 (437)
. .+.++.|+|.|..++..
T Consensus 430 s~~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 430 SNAAITSLSWNPSGSGLLSA 449 (459)
T ss_pred CCcceEEEEEcCCCchhhcc
Confidence 4 48888899988766553
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=195.72 Aligned_cols=275 Identities=16% Similarity=0.224 Sum_probs=201.2
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC------------C--CCC-CCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS------------H--NVS-KPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~------------~--~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
++.++.+-+|+| ++.++|+|+.|..|+|.|++. + +.. ..++++-.|..+|+++.|+|... +|+
T Consensus 111 HK~~cR~aafs~-DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~-ILi 188 (430)
T KOG0640|consen 111 HKSPCRAAAFSP-DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET-ILI 188 (430)
T ss_pred cccceeeeeeCC-CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh-eEE
Confidence 567899999999 789999999999999999871 1 111 35688889999999999999988 799
Q ss_pred EEeCCCeEEEEeCCCCce--eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 167 TGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
+|+.|++|++||...... ....+ ....+|.++.|+|.|.+ ++.|..-..+++||+.+.++.....
T Consensus 189 S~srD~tvKlFDfsK~saKrA~K~~-qd~~~vrsiSfHPsGef-llvgTdHp~~rlYdv~T~Qcfvsan----------- 255 (430)
T KOG0640|consen 189 SGSRDNTVKLFDFSKTSAKRAFKVF-QDTEPVRSISFHPSGEF-LLVGTDHPTLRLYDVNTYQCFVSAN----------- 255 (430)
T ss_pred eccCCCeEEEEecccHHHHHHHHHh-hccceeeeEeecCCCce-EEEecCCCceeEEeccceeEeeecC-----------
Confidence 999999999999986322 12222 24578999999999994 7888888899999999977544311
Q ss_pred EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 245 ~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.-..|++.|+++.+++.++ +.++++.||.|++||--+++|+.++.... ....+.++.|+.+|+++.+.+.|..
T Consensus 256 Pd~qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~~AH-~gsevcSa~Ftkn~kyiLsSG~DS~----- 328 (430)
T KOG0640|consen 256 PDDQHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIGNAH-GGSEVCSAVFTKNGKYILSSGKDST----- 328 (430)
T ss_pred cccccccceeEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHHhhc-CCceeeeEEEccCCeEEeecCCcce-----
Confidence 1357999999999999999 88999999999999999999998875321 2233455689999999999999998
Q ss_pred cccccccccccchhhhhhhhhcCC-----CccccccCC--------CCCCccccccccccC-HHHHHHHHHhhhcccccc
Q psy4571 325 KNYWQGLVLFDILVCEEQRQLLGT-----EEESSDRHS--------SDNDTEDLNSIWSMT-DEQREYYKTQFHNLQRHK 390 (437)
Q Consensus 325 ~~~~~~i~~wd~~~~~~~~~~~~h-----~~~~~~~~~--------~~~~~~~~~~~w~~~-~~~~~~~~~~f~~~~~~~ 390 (437)
+++|.+.+|+.+..+.|. ..--+...| .||......+-|+-. ...+........+..+..
T Consensus 329 ------vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i 402 (430)
T KOG0640|consen 329 ------VKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWI 402 (430)
T ss_pred ------eeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEE
Confidence 788888888888777554 111222233 334433334578874 443333333333333333
Q ss_pred ccCCCCcccccHHH
Q psy4571 391 SVSDPSYHLISGQV 404 (437)
Q Consensus 391 ~~~~~~~~~~~g~~ 404 (437)
.++..+-++++++.
T Consensus 403 ~HSP~~p~FmTcsd 416 (430)
T KOG0640|consen 403 VHSPVEPAFMTCSD 416 (430)
T ss_pred EeCCCCCceeeecc
Confidence 33333334555543
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-25 Score=194.56 Aligned_cols=268 Identities=16% Similarity=0.185 Sum_probs=207.0
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
..++.++... |..+.++||+.|.++-++|..++.+..+. .+ +...|+.+.|+|
T Consensus 219 ~pgi~ald~~-~s~~~ilTGG~d~~av~~d~~s~q~l~~~-~G-------------------------h~kki~~v~~~~ 271 (506)
T KOG0289|consen 219 TPGITALDII-PSSSKILTGGEDKTAVLFDKPSNQILATL-KG-------------------------HTKKITSVKFHK 271 (506)
T ss_pred CCCeeEEeec-CCCCcceecCCCCceEEEecchhhhhhhc-cC-------------------------cceEEEEEEecc
Confidence 4556666666 55678888888888888887776665442 11 335677899999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-cC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SH 192 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h 192 (437)
+...+++++.|..|+||.... .........|.++|+.+..+|.|.| |++++.||+..+.|++++........ ..
T Consensus 272 -~~~~v~~aSad~~i~vws~~~---~s~~~~~~~h~~~V~~ls~h~tgeY-llsAs~d~~w~Fsd~~~g~~lt~vs~~~s 346 (506)
T KOG0289|consen 272 -DLDTVITASADEIIRVWSVPL---SSEPTSSRPHEEPVTGLSLHPTGEY-LLSASNDGTWAFSDISSGSQLTVVSDETS 346 (506)
T ss_pred -chhheeecCCcceEEeecccc---ccCccccccccccceeeeeccCCcE-EEEecCCceEEEEEccCCcEEEEEeeccc
Confidence 677888999999999999874 3445566789999999999999998 99999999999999999776332222 12
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.-.+++.+|+|||- +|.+|..|+.|+|||+.+..... .+.+|+++|..|+|+.+|- .|++++.|
T Consensus 347 ~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks~~~~a--------------~Fpght~~vk~i~FsENGY-~Lat~add 410 (506)
T KOG0289|consen 347 DVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKSQTNVA--------------KFPGHTGPVKAISFSENGY-WLATAADD 410 (506)
T ss_pred cceeEEeeEcCCce-EEeccCCCceEEEEEcCCccccc--------------cCCCCCCceeEEEeccCce-EEEEEecC
Confidence 34589999999997 89999999999999999876443 3889999999999999887 78899999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc--hhhhhhhhhcCCCc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI--LVCEEQRQLLGTEE 350 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~--~~~~~~~~~~~h~~ 350 (437)
+.|++||++..+..+++..... .++..+.|.+.|++|+.++.+-.+ ++.+- ..-.++..+.-|.+
T Consensus 411 ~~V~lwDLRKl~n~kt~~l~~~--~~v~s~~fD~SGt~L~~~g~~l~V-----------y~~~k~~k~W~~~~~~~~~sg 477 (506)
T KOG0289|consen 411 GSVKLWDLRKLKNFKTIQLDEK--KEVNSLSFDQSGTYLGIAGSDLQV-----------YICKKKTKSWTEIKELADHSG 477 (506)
T ss_pred CeEEEEEehhhcccceeecccc--ccceeEEEcCCCCeEEeecceeEE-----------EEEecccccceeeehhhhccc
Confidence 9999999999998888876542 367888999999999999877553 33331 13344555666665
Q ss_pred cccccCCCCCCc
Q psy4571 351 ESSDRHSSDNDT 362 (437)
Q Consensus 351 ~~~~~~~~~~~~ 362 (437)
....+.|..+..
T Consensus 478 ~st~v~Fg~~aq 489 (506)
T KOG0289|consen 478 LSTGVRFGEHAQ 489 (506)
T ss_pred ccceeeecccce
Confidence 555555555444
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-25 Score=211.75 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=196.4
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
-+.-+|.+++|. .-++.+++||.|+++|+||..++.+..... ++. ..+.++..
T Consensus 247 GH~g~V~~l~~~-~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~-gh~-------------------------stv~~~~~ 299 (537)
T KOG0274|consen 247 GHFGGVWGLAFP-SGGDKLVSGSTDKTERVWDCSTGECTHSLQ-GHT-------------------------SSVRCLTI 299 (537)
T ss_pred CCCCCceeEEEe-cCCCEEEEEecCCcEEeEecCCCcEEEEec-CCC-------------------------ceEEEEEc
Confidence 344567777777 467888888888888888887777776653 222 33444444
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
. +..+++|+.|.+|++|++. .+..+..+.+|.++|.++..+ +. ++++|+.|++|++||+.+++. +..+.+
T Consensus 300 ~---~~~~~sgs~D~tVkVW~v~---n~~~l~l~~~h~~~V~~v~~~--~~-~lvsgs~d~~v~VW~~~~~~c-l~sl~g 369 (537)
T KOG0274|consen 300 D---PFLLVSGSRDNTVKVWDVT---NGACLNLLRGHTGPVNCVQLD--EP-LLVSGSYDGTVKVWDPRTGKC-LKSLSG 369 (537)
T ss_pred c---CceEeeccCCceEEEEecc---CcceEEEeccccccEEEEEec--CC-EEEEEecCceEEEEEhhhcee-eeeecC
Confidence 3 4678889999999999999 678888888899999999998 55 599999999999999998665 999999
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
|.+.|+++.+.+. . .+++|+.|+.|++||+++. ++ +.++.+|..-|..+.+ .++ ++++++
T Consensus 370 H~~~V~sl~~~~~-~-~~~Sgs~D~~IkvWdl~~~~~c--------------~~tl~~h~~~v~~l~~--~~~-~Lvs~~ 430 (537)
T KOG0274|consen 370 HTGRVYSLIVDSE-N-RLLSGSLDTTIKVWDLRTKRKC--------------IHTLQGHTSLVSSLLL--RDN-FLVSSS 430 (537)
T ss_pred CcceEEEEEecCc-c-eEEeeeeccceEeecCCchhhh--------------hhhhcCCccccccccc--ccc-eeEecc
Confidence 9999999988775 4 5899999999999999997 44 3447899988877765 455 788999
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
.|++|++||.+++++.+.+... +..++..+++. ...++.++.++. +++||+.+++..+.+..+..
T Consensus 431 aD~~Ik~WD~~~~~~~~~~~~~--~~~~v~~l~~~--~~~il~s~~~~~-----------~~l~dl~~~~~~~~l~~~~~ 495 (537)
T KOG0274|consen 431 ADGTIKLWDAEEGECLRTLEGR--HVGGVSALALG--KEEILCSSDDGS-----------VKLWDLRSGTLIRTLLSTDL 495 (537)
T ss_pred ccccEEEeecccCceeeeeccC--CcccEEEeecC--cceEEEEecCCe-----------eEEEecccCchhhhhhhccc
Confidence 9999999999999999888753 22333333333 467777788888 89999999999998855543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=196.61 Aligned_cols=292 Identities=15% Similarity=0.162 Sum_probs=223.8
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+..+...+.+++++ |+.++.++++.|++|.=|+..+++...-.+... +.+-. .+ -...... ..+...+.++
T Consensus 138 ~~~H~~s~~~vals-~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~--~~----~~~k~~r-~~h~keil~~ 208 (479)
T KOG0299|consen 138 IGKHQLSVTSVALS-PDDKRVFSASKDGTILKWDVLTGKKDRYIIERD-EVLKS--HG----NPLKESR-KGHVKEILTL 208 (479)
T ss_pred eccccCcceEEEee-ccccceeecCCCcceeeeehhcCcccccccccc-hhhhh--cc----CCCCccc-ccccceeEEE
Confidence 44556678888998 999999999999999999988877542222111 00000 00 0000111 1455678899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~ 189 (437)
+.+| ++.+||+|+.|..|.||+.+ +.+.++.+.+|.+.|.+++|-..-. -+++++.|++|++|+++.... +.++
T Consensus 209 avS~-Dgkylatgg~d~~v~Iw~~~---t~ehv~~~~ghr~~V~~L~fr~gt~-~lys~s~Drsvkvw~~~~~s~-vetl 282 (479)
T KOG0299|consen 209 AVSS-DGKYLATGGRDRHVQIWDCD---TLEHVKVFKGHRGAVSSLAFRKGTS-ELYSASADRSVKVWSIDQLSY-VETL 282 (479)
T ss_pred EEcC-CCcEEEecCCCceEEEecCc---ccchhhcccccccceeeeeeecCcc-ceeeeecCCceEEEehhHhHH-HHHH
Confidence 9999 79999999999999999999 6677888999999999999987655 499999999999999998655 7889
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
.+|++.|..+.....++ .+..|+.|+++++|++.... ...+.+|.+.+-|++|-.+.. +++|
T Consensus 283 yGHqd~v~~IdaL~reR-~vtVGgrDrT~rlwKi~ees---------------qlifrg~~~sidcv~~In~~H--fvsG 344 (479)
T KOG0299|consen 283 YGHQDGVLGIDALSRER-CVTVGGRDRTVRLWKIPEES---------------QLIFRGGEGSIDCVAFINDEH--FVSG 344 (479)
T ss_pred hCCccceeeechhcccc-eEEeccccceeEEEeccccc---------------eeeeeCCCCCeeeEEEecccc--eeec
Confidence 99999999999988887 57777799999999995532 234678888999999988776 7799
Q ss_pred eCCCeEEEEeCCCCCCceeeeeeec-ccC--------CceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 270 SEDNIMQEYCDSTDSDTKTMRLDSI-RSN--------GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~~~~~~~~~~-~~~--------~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+.||.|.+|++...+++.+...... ... .+..++..|...++++|+.+|. +++|-+..|-
T Consensus 345 SdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~-----------vrLW~i~~g~ 413 (479)
T KOG0299|consen 345 SDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGC-----------VRLWKIEDGL 413 (479)
T ss_pred cCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCc-----------eEEEEecCCc
Confidence 9999999999999988877663221 111 3456688999999999999999 7888887772
Q ss_pred ----hhhhhcCCCccccccCCCCCCccccc
Q psy4571 341 ----EQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 341 ----~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++..+. ....|+.++|+++|..+..
T Consensus 414 r~i~~l~~ls-~~GfVNsl~f~~sgk~iva 442 (479)
T KOG0299|consen 414 RAINLLYSLS-LVGFVNSLAFSNSGKRIVA 442 (479)
T ss_pred cccceeeecc-cccEEEEEEEccCCCEEEE
Confidence 222333 5567888899999984443
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=208.10 Aligned_cols=267 Identities=17% Similarity=0.238 Sum_probs=206.7
Q ss_pred EEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCE
Q psy4571 39 RLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 118 (437)
++..+.|.+++|+||+.|+.|++|+.....-. +....+ ...-.|...|++++... +++.
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~-----~s~~~~---------------asme~HsDWVNDiiL~~-~~~t 87 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNE-----PSTPYI---------------ASMEHHSDWVNDIILCG-NGKT 87 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCC-----cccchh---------------hhhhhhHhHHhhHHhhc-CCCc
Confidence 56667677888999999999999995321110 000000 01123556788888887 6778
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE-eCCCCcEEEEEeCCCeEEEEeCCCCce---------eeeE
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF-NPYSEYILATGSADKTVALWDLRNLKL---------KLHS 188 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~l~sgs~dg~i~lwd~~~~~~---------~~~~ 188 (437)
|++++.|-+|++|+..... ...+.++..|...|.|++. .++.. ++|+|+.|+.|.+||+.++.. ....
T Consensus 88 lIS~SsDtTVK~W~~~~~~-~~c~stir~H~DYVkcla~~ak~~~-lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~s 165 (735)
T KOG0308|consen 88 LISASSDTTVKVWNAHKDN-TFCMSTIRTHKDYVKCLAYIAKNNE-LVASGGLDRKIFLWDINTGTATLVASFNNVTVNS 165 (735)
T ss_pred eEEecCCceEEEeecccCc-chhHhhhhcccchheeeeecccCce-eEEecCCCccEEEEEccCcchhhhhhcccccccc
Confidence 8999999999999998653 3677888899999999999 55555 799999999999999997521 1223
Q ss_pred ec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 189 FE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 189 ~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
+. ++..+|++++.++.|. ++++|+..+.+++||.++.+.... +.||+..|.++..++||. .++
T Consensus 166 l~sG~k~siYSLA~N~t~t-~ivsGgtek~lr~wDprt~~kimk--------------LrGHTdNVr~ll~~dDGt-~~l 229 (735)
T KOG0308|consen 166 LGSGPKDSIYSLAMNQTGT-IIVSGGTEKDLRLWDPRTCKKIMK--------------LRGHTDNVRVLLVNDDGT-RLL 229 (735)
T ss_pred CCCCCccceeeeecCCcce-EEEecCcccceEEeccccccceee--------------eeccccceEEEEEcCCCC-eEe
Confidence 33 7888999999999995 799999999999999999755433 679999999999999999 677
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
++|.||+|++||+...+++.++.. |..++.....+|+=..+.+|+.|+. |..-|+.+......+..
T Consensus 230 s~sSDgtIrlWdLgqQrCl~T~~v---H~e~VWaL~~~~sf~~vYsG~rd~~-----------i~~Tdl~n~~~~tlick 295 (735)
T KOG0308|consen 230 SASSDGTIRLWDLGQQRCLATYIV---HKEGVWALQSSPSFTHVYSGGRDGN-----------IYRTDLRNPAKSTLICK 295 (735)
T ss_pred ecCCCceEEeeeccccceeeeEEe---ccCceEEEeeCCCcceEEecCCCCc-----------EEecccCCchhheEeec
Confidence 999999999999999999988776 6677888888999999999999998 66666666443333344
Q ss_pred CCccccccCCC
Q psy4571 348 TEEESSDRHSS 358 (437)
Q Consensus 348 h~~~~~~~~~~ 358 (437)
-+.++..+..+
T Consensus 296 ~daPv~~l~~~ 306 (735)
T KOG0308|consen 296 EDAPVLKLHLH 306 (735)
T ss_pred CCCchhhhhhc
Confidence 44455555544
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=191.23 Aligned_cols=202 Identities=16% Similarity=0.234 Sum_probs=170.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.|..+|.+++.+| +.+++++|+.|..-.+|++. ++.....+.+|+..|+++.|+.+|.+ ||||..+|.|+||+..
T Consensus 62 ~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~---~ge~~~eltgHKDSVt~~~Fshdgtl-LATGdmsG~v~v~~~s 136 (399)
T KOG0296|consen 62 KHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDIS---TGEFAGELTGHKDSVTCCSFSHDGTL-LATGDMSGKVLVFKVS 136 (399)
T ss_pred hcCCceEEEEeCC-CCceEEecCCCceEEEEEcc---CCcceeEecCCCCceEEEEEccCceE-EEecCCCccEEEEEcc
Confidence 4677899999999 89999999999999999999 45578888999999999999999995 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
++.. ...+..--..+.=+.|+|.+. +|+.|+.||.+..|.+.+... ...+.||+.++++-.|.|
T Consensus 137 tg~~-~~~~~~e~~dieWl~WHp~a~-illAG~~DGsvWmw~ip~~~~--------------~kv~~Gh~~~ct~G~f~p 200 (399)
T KOG0296|consen 137 TGGE-QWKLDQEVEDIEWLKWHPRAH-ILLAGSTDGSVWMWQIPSQAL--------------CKVMSGHNSPCTCGEFIP 200 (399)
T ss_pred cCce-EEEeecccCceEEEEeccccc-EEEeecCCCcEEEEECCCcce--------------eeEecCCCCCcccccccC
Confidence 9766 445544456677789999887 799999999999999988532 345889999999999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
+|+ .++++..||+|++||+.++.++..+.... +.....+.++.++..+..|+.++.+.+....
T Consensus 201 dGK-r~~tgy~dgti~~Wn~ktg~p~~~~~~~e--~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~ 263 (399)
T KOG0296|consen 201 DGK-RILTGYDDGTIIVWNPKTGQPLHKITQAE--GLELPCISLNLAGSTLTKGNSEGVACGVNNG 263 (399)
T ss_pred CCc-eEEEEecCceEEEEecCCCceeEEecccc--cCcCCccccccccceeEeccCCccEEEEccc
Confidence 999 68899999999999999998877766432 3345556888899999999999885444433
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-25 Score=185.89 Aligned_cols=302 Identities=16% Similarity=0.229 Sum_probs=212.8
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
.+.-.|.++......+.++++|+.|+.+-+||.+...-+.. ...+ |.. +.+ +.....-.|+.+|.++.|
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~-----s~li-~k~---~c~--v~~~h~~~Hky~iss~~W 109 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEA-----SGLI-AKH---KCI--VAKQHENGHKYAISSAIW 109 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhh-----ccce-ehe---eee--ccccCCccceeeeeeeEE
Confidence 44567899999988899999999999999999764332211 0111 100 000 112334457789999999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC--CcEEEEEeCCCeEEEEeCCCCceeeeEe
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS--EYILATGSADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~sgs~dg~i~lwd~~~~~~~~~~~ 189 (437)
.|.+..+|.+++.|.+++|||..+ .+....++ .++.|.+-+++|-. ..++|+|..|-.|++.|+.++.. -.++
T Consensus 110 yP~DtGmFtssSFDhtlKVWDtnT---lQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~-sH~L 184 (397)
T KOG4283|consen 110 YPIDTGMFTSSSFDHTLKVWDTNT---LQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF-SHTL 184 (397)
T ss_pred eeecCceeecccccceEEEeeccc---ceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc-eeee
Confidence 999999999999999999999984 44444443 46789999998853 23789999999999999999765 8899
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC-CCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED-GPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+|.+.|.++.|+|...++|++|+.||.|++||++...........+. ..+..+..-..|.+.|.+++|+.++. .+++
T Consensus 185 sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~-~l~~ 263 (397)
T KOG4283|consen 185 SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDAR-YLAS 263 (397)
T ss_pred ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccch-hhhh
Confidence 999999999999999999999999999999999998733222222222 23334445678999999999999999 6779
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec---CCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS---PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s---~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
++.|..+++|+..+|+....-.... .+......++. -+...++.--.++. +.+.++-.|..++.+
T Consensus 264 ~gtd~r~r~wn~~~G~ntl~~~g~~-~~n~~~~~~~~~~~~~s~vfv~~p~~~~-----------lall~~~sgs~ir~l 331 (397)
T KOG4283|consen 264 CGTDDRIRVWNMESGRNTLREFGPI-IHNQTTSFAVHIQSMDSDVFVLFPNDGS-----------LALLNLLEGSFVRRL 331 (397)
T ss_pred ccCccceEEeecccCcccccccccc-cccccccceEEEeecccceEEEEecCCe-----------EEEEEccCceEEEee
Confidence 9999999999999886432221111 11111111111 11111111111223 677788888888888
Q ss_pred cCCCccccccCCCCCCc
Q psy4571 346 LGTEEESSDRHSSDNDT 362 (437)
Q Consensus 346 ~~h~~~~~~~~~~~~~~ 362 (437)
.+|...+.+..+.|+-+
T Consensus 332 ~~h~k~i~c~~~~~~fq 348 (397)
T KOG4283|consen 332 STHLKRINCAAYRPDFE 348 (397)
T ss_pred ecccceeeEEeecCchh
Confidence 88877777777666543
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=199.46 Aligned_cols=240 Identities=15% Similarity=0.238 Sum_probs=179.8
Q ss_pred cCCCceeEEEecCCCCeE-EEecCceEEEEEeeecc-c--------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 64 KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ-N--------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~-~--------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
.++..+..+...+.+..+ +.+.|..|++||+..-. . ......|++++|++ .+..|++.+.....+|+|-
T Consensus 165 hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~-Tg~~iLvvsg~aqakl~DR 243 (641)
T KOG0772|consen 165 HGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSV-TGDQILVVSGSAQAKLLDR 243 (641)
T ss_pred CCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecC-CCCeEEEEecCcceeEEcc
Confidence 445667778877776655 67789999999965211 1 11345789999999 5666667777788999987
Q ss_pred CCCCC---------CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-----cCCCceEEE
Q psy4571 134 RSHNV---------SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-----SHKDEIFQV 199 (437)
Q Consensus 134 ~~~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-----~h~~~v~~v 199 (437)
..... ..-+...++|...++|.+|+|+.+..++|++.||++++||+...+.....++ +..-+++.+
T Consensus 244 dG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC 323 (641)
T KOG0772|consen 244 DGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSC 323 (641)
T ss_pred CCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceee
Confidence 63211 1123445799999999999999988899999999999999997665444443 233468999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 200 ~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
+|+|+|+ ++|+|+.||.|.+|+.+..... .......+|.. .|++|.|+++|+ +|++-+.|+++++
T Consensus 324 ~~nrdg~-~iAagc~DGSIQ~W~~~~~~v~-----------p~~~vk~AH~~g~~Itsi~FS~dg~-~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 324 AWNRDGK-LIAAGCLDGSIQIWDKGSRTVR-----------PVMKVKDAHLPGQDITSISFSYDGN-YLLSRGFDDTLKV 390 (641)
T ss_pred ecCCCcc-hhhhcccCCceeeeecCCcccc-----------cceEeeeccCCCCceeEEEeccccc-hhhhccCCCceee
Confidence 9999999 5999999999999998654322 22345667876 899999999999 7889999999999
Q ss_pred EeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 278 YCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 278 wd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
||++..+.................++|||+.+++++|+.-
T Consensus 391 WDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~ 430 (641)
T KOG0772|consen 391 WDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSA 430 (641)
T ss_pred eeccccccchhhhcCCCccCCCCccccCCCceEEEecccc
Confidence 9999865432222222234456678999999999999654
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-24 Score=180.44 Aligned_cols=261 Identities=16% Similarity=0.162 Sum_probs=205.1
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeEEEecCceEEEEEeeecccc--
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNF-- 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~-- 100 (437)
....|.++.|. |....|+.++.|+++++++. ++..+.+..|.+....++...||.|+.+|+..+...
T Consensus 12 P~d~IS~v~f~-~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~i 90 (323)
T KOG1036|consen 12 PEDGISSVKFS-PSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQI 90 (323)
T ss_pred ChhceeeEEEc-CcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCcceee
Confidence 35679999999 88888888899999999993 567889999988888888999999999998876644
Q ss_pred -ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 101 -PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 101 -~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+..++.|+.+++ ..+.+++|+.|++|++||.+. ......+. ....|.++..+ +. .|++|+.|..+.+||+
T Consensus 91 gth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~---~~~~~~~d-~~kkVy~~~v~--g~-~LvVg~~~r~v~iyDL 162 (323)
T KOG1036|consen 91 GTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRN---KVVVGTFD-QGKKVYCMDVS--GN-RLVVGTSDRKVLIYDL 162 (323)
T ss_pred ccCCCceEEEEeec-cCCeEEEcccCccEEEEeccc---cccccccc-cCceEEEEecc--CC-EEEEeecCceEEEEEc
Confidence 3678999999998 678889999999999999983 22333332 24478888776 55 4999999999999999
Q ss_pred CCCceeeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc--------
Q psy4571 180 RNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-------- 250 (437)
Q Consensus 180 ~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-------- 250 (437)
++...+.+.- ...+-.+.|+++.|++.. ++.++-||+|.+=.+......+. .-+.++.|.
T Consensus 163 Rn~~~~~q~reS~lkyqtR~v~~~pn~eG-y~~sSieGRVavE~~d~s~~~~s----------kkyaFkCHr~~~~~~~~ 231 (323)
T KOG1036|consen 163 RNLDEPFQRRESSLKYQTRCVALVPNGEG-YVVSSIEGRVAVEYFDDSEEAQS----------KKYAFKCHRLSEKDTEI 231 (323)
T ss_pred ccccchhhhccccceeEEEEEEEecCCCc-eEEEeecceEEEEccCCchHHhh----------hceeEEeeecccCCceE
Confidence 9877644221 123467899999998776 78899999998766655422221 123344453
Q ss_pred -ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 251 -AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 251 -~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
.+|++|+|+|-.+ .|+||+.||.|.+||+.+.+.+..+.. ....+..++|+.+|..||.++.-
T Consensus 232 ~yPVNai~Fhp~~~-tfaTgGsDG~V~~Wd~~~rKrl~q~~~---~~~SI~slsfs~dG~~LAia~sy 295 (323)
T KOG1036|consen 232 IYPVNAIAFHPIHG-TFATGGSDGIVNIWDLFNRKRLKQLAK---YETSISSLSFSMDGSLLAIASSY 295 (323)
T ss_pred EEEeceeEeccccc-eEEecCCCceEEEccCcchhhhhhccC---CCCceEEEEeccCCCeEEEEech
Confidence 3799999999987 799999999999999999888877754 24567778999999999999743
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=202.02 Aligned_cols=246 Identities=15% Similarity=0.266 Sum_probs=188.3
Q ss_pred ceEeeecCCCceeEEEecCCCCeEEE-ecCceEEEEEeeecccc----c-cCCCcceEEeeCCCCCEEEEEECCCcEEEE
Q psy4571 58 EYKIWKKNTPFLYDLVVNNYVANISC-ILNISILFFEIIFTQNF----P-FPLSRQDVAWHLLHESLFGSVADDQKLMIW 131 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~~~~~i~~-~~~~~i~~~~~~~~~~~----~-~~~~v~~~~~sp~~~~~l~~~~~dg~v~vw 131 (437)
...+-+.+...+..+.|.+.+..++. ..+|.+.|||....... . +...|.+++|+ ...+.+|+.||.|..+
T Consensus 209 v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~ 285 (484)
T KOG0305|consen 209 VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNH 285 (484)
T ss_pred eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc---CceEEEecCCCcEEEE
Confidence 33444444555555666555555532 34556666664322211 1 46678899997 4689999999999999
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 211 (437)
|++..+. ....+.+|...|..++|++|+.+ +|+|+.|+.+.|||... ..+...+..|.+.|..++|+|-.+.+||+
T Consensus 286 dvR~~~~--~~~~~~~H~qeVCgLkws~d~~~-lASGgnDN~~~Iwd~~~-~~p~~~~~~H~aAVKA~awcP~q~~lLAs 361 (484)
T KOG0305|consen 286 DVRISQH--VVSTLQGHRQEVCGLKWSPDGNQ-LASGGNDNVVFIWDGLS-PEPKFTFTEHTAAVKALAWCPWQSGLLAT 361 (484)
T ss_pred EEecchh--hhhhhhcccceeeeeEECCCCCe-eccCCCccceEeccCCC-ccccEEEeccceeeeEeeeCCCccCceEE
Confidence 9985432 22248899999999999999996 99999999999999976 44578888999999999999988889999
Q ss_pred Ee--CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE-eCCCeEEEEeCCCCCCcee
Q psy4571 212 SG--TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV-SEDNIMQEYCDSTDSDTKT 288 (437)
Q Consensus 212 g~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~ 288 (437)
|+ .|+.|++||..++..... . .-...|..|.|++..+.++.+- ..++.|.||+..+.+.+..
T Consensus 362 GGGs~D~~i~fwn~~~g~~i~~--------------v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~ 426 (484)
T KOG0305|consen 362 GGGSADRCIKFWNTNTGARIDS--------------V-DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAE 426 (484)
T ss_pred cCCCcccEEEEEEcCCCcEecc--------------c-ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeee
Confidence 85 699999999998766554 2 2346899999999997555444 3578999999999776666
Q ss_pred eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 289 MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 289 ~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+.. |...+..+++||||..+++|+.|.+ +++|++-..
T Consensus 427 l~g---H~~RVl~la~SPdg~~i~t~a~DET-----------lrfw~~f~~ 463 (484)
T KOG0305|consen 427 LLG---HTSRVLYLALSPDGETIVTGAADET-----------LRFWNLFDE 463 (484)
T ss_pred ecC---CcceeEEEEECCCCCEEEEecccCc-----------EEeccccCC
Confidence 654 6677888999999999999999999 677776553
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=208.85 Aligned_cols=223 Identities=17% Similarity=0.264 Sum_probs=176.0
Q ss_pred EEecCceEEEEEeee--ccc-----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEE
Q psy4571 82 SCILNISILFFEIIF--TQN-----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC 154 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~--~~~-----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 154 (437)
+|...|.|.+||+.. .+. -.|.+.++++.|++...++|++|+.||+|++||++ ..+...++.+....|.+
T Consensus 105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR---~~~S~~t~~~nSESiRD 181 (839)
T KOG0269|consen 105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLR---SKKSKSTFRSNSESIRD 181 (839)
T ss_pred eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeee---cccccccccccchhhhc
Confidence 677788888888765 221 13678999999999999999999999999999999 45556677777889999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 234 (437)
++|+|...+.|+++.+.|.+++||++....+...+.+|.++|.|+.|+|++. +|||||.|+.|+|||+.+.....
T Consensus 182 V~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~-~lATGGRDK~vkiWd~t~~~~~~---- 256 (839)
T KOG0269|consen 182 VKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNRE-WLATGGRDKMVKIWDMTDSRAKP---- 256 (839)
T ss_pred eeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCc-eeeecCCCccEEEEeccCCCccc----
Confidence 9999987778999999999999999998888889999999999999999776 69999999999999998754321
Q ss_pred CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcc
Q psy4571 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASST 311 (437)
Q Consensus 235 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l 311 (437)
+.+.. ...+|.+|.|-|..++.|++++ .|-.|+|||++..-... ....-|......++|. .|-..+
T Consensus 257 --------~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~--~t~~eH~~~vt~i~W~~~d~~~l 325 (839)
T KOG0269|consen 257 --------KHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPY--ATFLEHTDSVTGIAWDSGDRINL 325 (839)
T ss_pred --------eeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccc--eeeeccCccccceeccCCCceee
Confidence 22222 2468999999999998999886 58899999998642221 1222244445555663 355677
Q ss_pred cccCCCCccccc
Q psy4571 312 ASESPTPTNSVH 323 (437)
Q Consensus 312 ~s~s~d~~~~~~ 323 (437)
.+++.|+++...
T Consensus 326 ~s~sKD~tv~qh 337 (839)
T KOG0269|consen 326 WSCSKDGTVLQH 337 (839)
T ss_pred EeecCccHHHHh
Confidence 788888875433
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-23 Score=168.76 Aligned_cols=251 Identities=19% Similarity=0.220 Sum_probs=188.1
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcc
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQ 107 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~ 107 (437)
+.-+++.-.|||.||+ |.+++|+|||.|++||+...+...+... .+..+ .. .+...|.
T Consensus 83 kr~khhkgsiyc~~ws-~~geliatgsndk~ik~l~fn~dt~~~~--g~dle--~n-----------------mhdgtir 140 (350)
T KOG0641|consen 83 KRNKHHKGSIYCTAWS-PCGELIATGSNDKTIKVLPFNADTCNAT--GHDLE--FN-----------------MHDGTIR 140 (350)
T ss_pred eeccccCccEEEEEec-CccCeEEecCCCceEEEEeccccccccc--Cccee--ee-----------------ecCCcee
Confidence 4567888899999999 9999999999999999987554333211 01110 01 1234566
Q ss_pred eEEeeC---CCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 108 DVAWHL---LHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 108 ~~~~sp---~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
+++|-. .++.+|++++ .|..|++-|.. .++.+..+.+|++.|.++ ++-+|- ++++|+.|.+|++||++-+.
T Consensus 141 dl~fld~~~s~~~il~s~gagdc~iy~tdc~---~g~~~~a~sghtghilal-yswn~~-m~~sgsqdktirfwdlrv~~ 215 (350)
T KOG0641|consen 141 DLAFLDDPESGGAILASAGAGDCKIYITDCG---RGQGFHALSGHTGHILAL-YSWNGA-MFASGSQDKTIRFWDLRVNS 215 (350)
T ss_pred eeEEecCCCcCceEEEecCCCcceEEEeecC---CCCcceeecCCcccEEEE-EEecCc-EEEccCCCceEEEEeeeccc
Confidence 777732 1455666654 35566666766 677888999999999877 333465 69999999999999999855
Q ss_pred eeeeEecc--C-----CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 184 LKLHSFES--H-----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 184 ~~~~~~~~--h-----~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
. +.++.. | ...|.+++..|.|+ +|++|-.|....+||++.+. +++.+..|...|+++
T Consensus 216 ~-v~~l~~~~~~~glessavaav~vdpsgr-ll~sg~~dssc~lydirg~r--------------~iq~f~phsadir~v 279 (350)
T KOG0641|consen 216 C-VNTLDNDFHDGGLESSAVAAVAVDPSGR-LLASGHADSSCMLYDIRGGR--------------MIQRFHPHSADIRCV 279 (350)
T ss_pred e-eeeccCcccCCCcccceeEEEEECCCcc-eeeeccCCCceEEEEeeCCc--------------eeeeeCCCccceeEE
Confidence 4 555432 2 25689999999998 79999999999999999974 455689999999999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee--eeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR--LDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.|+|... ++.+++.|..|++=|++.. ....+. .-..+....+.+.|+|..-.+++.+.|.++.+|
T Consensus 280 rfsp~a~-yllt~syd~~ikltdlqgd-la~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 280 RFSPGAH-YLLTCSYDMKIKLTDLQGD-LAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred EeCCCce-EEEEecccceEEEeecccc-hhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEe
Confidence 9999877 6779999999999999753 222222 122356778889999999999999999995544
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-24 Score=176.07 Aligned_cols=263 Identities=13% Similarity=0.202 Sum_probs=203.8
Q ss_pred eecCCCceeEEEecCCCCeEEE-ecCceEEEEEeeecc------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 62 WKKNTPFLYDLVVNNYVANISC-ILNISILFFEIIFTQ------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i~~-~~~~~i~~~~~~~~~------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
.+.+.+++..+.|+..+..+.+ +.|+++.+|.+...+ ...+...|..++|+|.+..+|++++.|.+|++||.+
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r 95 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIR 95 (313)
T ss_pred hhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEec
Confidence 3456688899999888877744 578899999876543 223566899999999999999999999999999999
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
..+++.......+.+ -+.|+|+|.+ ++.++.|..|...|.++.+. +.. ......+..++|+-++.. ++....
T Consensus 96 ---~~k~~~~i~~~~eni-~i~wsp~g~~-~~~~~kdD~it~id~r~~~~-~~~-~~~~~e~ne~~w~~~nd~-Fflt~G 167 (313)
T KOG1407|consen 96 ---SGKCTARIETKGENI-NITWSPDGEY-IAVGNKDDRITFIDARTYKI-VNE-EQFKFEVNEISWNNSNDL-FFLTNG 167 (313)
T ss_pred ---cCcEEEEeeccCcce-EEEEcCCCCE-EEEecCcccEEEEEecccce-eeh-hcccceeeeeeecCCCCE-EEEecC
Confidence 567776665544444 5889999997 99999999999999998553 333 345677889999977764 555555
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
.|.|.|......+. +..++.|.....||.|+|+|+ .+|+|+.|..+.+||++..-+++.+.-
T Consensus 168 lG~v~ILsypsLkp--------------v~si~AH~snCicI~f~p~Gr-yfA~GsADAlvSLWD~~ELiC~R~isR--- 229 (313)
T KOG1407|consen 168 LGCVEILSYPSLKP--------------VQSIKAHPSNCICIEFDPDGR-YFATGSADALVSLWDVDELICERCISR--- 229 (313)
T ss_pred CceEEEEecccccc--------------ccccccCCcceEEEEECCCCc-eEeeccccceeeccChhHhhhheeecc---
Confidence 79999998876544 455889999999999999999 799999999999999999888887764
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCc
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
..-++..+.||.||++||+|+.|.. |-|-++.||..+..+.. ..+-..++++|...
T Consensus 230 ldwpVRTlSFS~dg~~lASaSEDh~-----------IDIA~vetGd~~~eI~~-~~~t~tVAWHPk~~ 285 (313)
T KOG1407|consen 230 LDWPVRTLSFSHDGRMLASASEDHF-----------IDIAEVETGDRVWEIPC-EGPTFTVAWHPKRP 285 (313)
T ss_pred ccCceEEEEeccCcceeeccCccce-----------EEeEecccCCeEEEeec-cCCceeEEecCCCc
Confidence 3456677899999999999999998 55556666665544432 23444555555443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=192.38 Aligned_cols=214 Identities=17% Similarity=0.255 Sum_probs=177.6
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.-+.||+ +|++||+++.|.+..+|++......+..+++.+|..+|..+.||||.++ |++++.|..+.+||+.+
T Consensus 223 htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdry-LlaCg~~e~~~lwDv~t 300 (519)
T KOG0293|consen 223 HTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRY-LLACGFDEVLSLWDVDT 300 (519)
T ss_pred CCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCe-EEecCchHheeeccCCc
Confidence 456889999999 7999999999999999998866556678899999999999999999998 88888888999999999
Q ss_pred CceeeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc-ccEEEEEEc
Q psy4571 182 LKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWN 259 (437)
Q Consensus 182 ~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~ 259 (437)
+.. ...+ .+|...+.+++|.|||.. +++|+.|+.+..||+..... ...++.. ..|.+++.+
T Consensus 301 gd~-~~~y~~~~~~S~~sc~W~pDg~~-~V~Gs~dr~i~~wdlDgn~~---------------~~W~gvr~~~v~dlait 363 (519)
T KOG0293|consen 301 GDL-RHLYPSGLGFSVSSCAWCPDGFR-FVTGSPDRTIIMWDLDGNIL---------------GNWEGVRDPKVHDLAIT 363 (519)
T ss_pred chh-hhhcccCcCCCcceeEEccCCce-eEecCCCCcEEEecCCcchh---------------hcccccccceeEEEEEc
Confidence 776 3333 345688999999999986 89999999999999987431 1122322 468999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+||++ +++.+.|..|++++.++......+. ...+..+...|.||+++.+.=.+.. +++||+...
T Consensus 364 ~Dgk~-vl~v~~d~~i~l~~~e~~~dr~lis----e~~~its~~iS~d~k~~LvnL~~qe-----------i~LWDl~e~ 427 (519)
T KOG0293|consen 364 YDGKY-VLLVTVDKKIRLYNREARVDRGLIS----EEQPITSFSISKDGKLALVNLQDQE-----------IHLWDLEEN 427 (519)
T ss_pred CCCcE-EEEEecccceeeechhhhhhhcccc----ccCceeEEEEcCCCcEEEEEcccCe-----------eEEeecchh
Confidence 99995 5577799999999998876554443 3567788899999999888777666 899999999
Q ss_pred hhhhhhcCCCc
Q psy4571 340 EEQRQLLGTEE 350 (437)
Q Consensus 340 ~~~~~~~~h~~ 350 (437)
+.++.+.||..
T Consensus 428 ~lv~kY~Ghkq 438 (519)
T KOG0293|consen 428 KLVRKYFGHKQ 438 (519)
T ss_pred hHHHHhhcccc
Confidence 99999999975
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-22 Score=196.43 Aligned_cols=214 Identities=16% Similarity=0.198 Sum_probs=155.2
Q ss_pred EeeccCceEeee-----------cCCCceeEEEecCC-CCeE-EEecCceEEEEEeeeccc------------cccCCCc
Q psy4571 52 ERVINEEYKIWK-----------KNTPFLYDLVVNNY-VANI-SCILNISILFFEIIFTQN------------FPFPLSR 106 (437)
Q Consensus 52 tgs~d~~v~iw~-----------~~~~~~~~~~~~~~-~~~i-~~~~~~~i~~~~~~~~~~------------~~~~~~v 106 (437)
.|+.++.+++|+ .|.+.+.++.|++. ...+ +++.|+.|++||+..... ..+...|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V 128 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI 128 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence 366777888886 35677888888876 3333 777888999998754211 2356789
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.+++|+|.+..+|++++.||+|++||+++ .+....+. |...|.+++|+|+|. +|++++.|+.|+|||++++.. +
T Consensus 129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~t---g~~~~~i~-~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~-i 202 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSSGFDSFVNIWDIEN---EKRAFQIN-MPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEI-A 202 (568)
T ss_pred EEEEECCCCCeEEEEEeCCCeEEEEECCC---CcEEEEEe-cCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcE-E
Confidence 99999996556778999999999999984 34444443 567899999999999 599999999999999999665 6
Q ss_pred eEeccCCCceEEE-----EEcCCCCcEEEEEeCCC----eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 187 HSFESHKDEIFQV-----QWSPHNETILASSGTDR----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 187 ~~~~~h~~~v~~v-----~~~p~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
..+.+|.+.+.+. .|++++.+ +++++.|+ .|++||++....... ......+.+.+...-
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d~~~-IlTtG~d~~~~R~VkLWDlr~~~~pl~-----------~~~ld~~~~~L~p~~ 270 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGDDNY-ILSTGFSKNNMREMKLWDLKNTTSALV-----------TMSIDNASAPLIPHY 270 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCCCCE-EEEEEcCCCCccEEEEEECCCCCCceE-----------EEEecCCccceEEee
Confidence 7888898765433 34588875 66666553 799999996432111 122333333333333
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
..++|. ++++|+.|+.|++|++..+.
T Consensus 271 D~~tg~-l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 271 DESTGL-IYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred eCCCCC-EEEEEECCCeEEEEEccCCc
Confidence 344566 78899999999999998763
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-23 Score=168.22 Aligned_cols=292 Identities=15% Similarity=0.177 Sum_probs=211.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
.....|-+++|+ |.+.+.+.||..++.||-... .+.++.. ..-+...- .. +...+...++.+|.|.+|
T Consensus 30 ~dsqairav~fh-p~g~lyavgsnskt~ric~yp--~l~~~r~----~hea~~~p-p~----v~~kr~khhkgsiyc~~w 97 (350)
T KOG0641|consen 30 EDSQAIRAVAFH-PAGGLYAVGSNSKTFRICAYP--ALIDLRH----AHEAAKQP-PS----VLCKRNKHHKGSIYCTAW 97 (350)
T ss_pred cchhheeeEEec-CCCceEEeccCCceEEEEccc--cccCccc----ccccccCC-Ce----EEeeeccccCccEEEEEe
Confidence 345567889999 999999999999999985531 1111110 00000000 00 111233457789999999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCC--CCCCCeeeeccCCCCeEEEEEeCC---CCcEEEEEeC-CCeEEEEeCCCCcee
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSH--NVSKPSHTVDAHTAEVNCLSFNPY---SEYILATGSA-DKTVALWDLRNLKLK 185 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~h~~~v~~l~~~~~---~~~~l~sgs~-dg~i~lwd~~~~~~~ 185 (437)
+| .+.++++|++|.+|++.-.+.. +....-..+.-|.+.|..++|..+ +..+|++++. |..|.+=|...++.
T Consensus 98 s~-~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~- 175 (350)
T KOG0641|consen 98 SP-CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQG- 175 (350)
T ss_pred cC-ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCc-
Confidence 99 7899999999999999766533 222234567789999999999643 4446777654 77788888888665
Q ss_pred eeEeccCCCceEEE-EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC---ccccEEEEEEccC
Q psy4571 186 LHSFESHKDEIFQV-QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPN 261 (437)
Q Consensus 186 ~~~~~~h~~~v~~v-~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~p~ 261 (437)
...+.+|.+.|.++ .| +|- ++++|+.|.+|++||++-..++..+... +++ ..+.|.+++..|.
T Consensus 176 ~~a~sghtghilalysw--n~~-m~~sgsqdktirfwdlrv~~~v~~l~~~----------~~~~glessavaav~vdps 242 (350)
T KOG0641|consen 176 FHALSGHTGHILALYSW--NGA-MFASGSQDKTIRFWDLRVNSCVNTLDND----------FHDGGLESSAVAAVAVDPS 242 (350)
T ss_pred ceeecCCcccEEEEEEe--cCc-EEEccCCCceEEEEeeeccceeeeccCc----------ccCCCcccceeEEEEECCC
Confidence 88899999998776 34 344 7999999999999999987666553210 111 1357999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
|+ +|++|-.|....+||++.++.++.+.. +...+.++.|||...++.+++.|.. |++-|+. |.+
T Consensus 243 gr-ll~sg~~dssc~lydirg~r~iq~f~p---hsadir~vrfsp~a~yllt~syd~~-----------ikltdlq-gdl 306 (350)
T KOG0641|consen 243 GR-LLASGHADSSCMLYDIRGGRMIQRFHP---HSADIRCVRFSPGAHYLLTCSYDMK-----------IKLTDLQ-GDL 306 (350)
T ss_pred cc-eeeeccCCCceEEEEeeCCceeeeeCC---CccceeEEEeCCCceEEEEecccce-----------EEEeecc-cch
Confidence 99 999999999999999999999888764 4566777899999999999999988 6777763 333
Q ss_pred hhh-----hcCCCccccccCCCCCCccccc
Q psy4571 342 QRQ-----LLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 342 ~~~-----~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
.+. +..|.+.+....++|..-.+++
T Consensus 307 a~el~~~vv~ehkdk~i~~rwh~~d~sfis 336 (350)
T KOG0641|consen 307 AHELPIMVVAEHKDKAIQCRWHPQDFSFIS 336 (350)
T ss_pred hhcCceEEEEeccCceEEEEecCccceeee
Confidence 333 3678888887777776654443
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=180.55 Aligned_cols=292 Identities=16% Similarity=0.181 Sum_probs=210.3
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
++-+.-.|.++||+ .+|+.|+|.+.|++||+|+...-.. ..+ ..+ .++.+.. ..+.+
T Consensus 82 LKgH~~~vt~~~Fs-SdGK~lat~~~Dr~Ir~w~~~DF~~-----~eH-r~~---------------R~nve~d-hpT~V 138 (420)
T KOG2096|consen 82 LKGHKKEVTDVAFS-SDGKKLATISGDRSIRLWDVRDFEN-----KEH-RCI---------------RQNVEYD-HPTRV 138 (420)
T ss_pred hhccCCceeeeEEc-CCCceeEEEeCCceEEEEecchhhh-----hhh-hHh---------------hccccCC-CceEE
Confidence 44455679999999 9999999999999999999643000 000 000 1111111 45789
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee---------eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH---------TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---------~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
+|.|+-...+++.....++++|.+.....+.... .-+.|...+..+-....+.+ |++++.|..|.||+++
T Consensus 139 ~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~-imsas~dt~i~lw~lk 217 (420)
T KOG2096|consen 139 VFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKY-IMSASLDTKICLWDLK 217 (420)
T ss_pred EECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceE-EEEecCCCcEEEEecC
Confidence 9999777777778888899999886433222111 11345667777777777775 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
++. +..+......-+..+.+|+|+ ++++++.--.|+||.+--.+.-.- .....++.++||.+.|..++|+|
T Consensus 218 -Gq~-L~~idtnq~~n~~aavSP~GR-Fia~~gFTpDVkVwE~~f~kdG~f------qev~rvf~LkGH~saV~~~aFsn 288 (420)
T KOG2096|consen 218 -GQL-LQSIDTNQSSNYDAAVSPDGR-FIAVSGFTPDVKVWEPIFTKDGTF------QEVKRVFSLKGHQSAVLAAAFSN 288 (420)
T ss_pred -Cce-eeeeccccccccceeeCCCCc-EEEEecCCCCceEEEEEeccCcch------hhhhhhheeccchhheeeeeeCC
Confidence 454 777766666778899999999 588888888899999743321110 01244677899999999999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCC----C---Cceeeee-eecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTD----S---DTKTMRL-DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~----~---~~~~~~~-~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
+.. .++|.+.||++++||.+-. + .+++... ..........++.+|.|..||...... ++
T Consensus 289 ~S~-r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~------------l~ 355 (420)
T KOG2096|consen 289 SST-RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSD------------LK 355 (420)
T ss_pred Ccc-eeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCc------------eE
Confidence 998 7889999999999998621 1 1222210 011223456779999999998876543 78
Q ss_pred cccchhhhhhhhh-cCCCccccccCCCCCCcccccc
Q psy4571 333 LFDILVCEEQRQL-LGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 333 ~wd~~~~~~~~~~-~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++..++|+....+ ..|.+.++++.++++|..++++
T Consensus 356 ~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atc 391 (420)
T KOG2096|consen 356 VFASEDGKDYPELEDIHSTTISSISYSSDGKYIATC 391 (420)
T ss_pred EEEcccCccchhHHHhhcCceeeEEecCCCcEEeee
Confidence 9999999888777 6799999999999999988876
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=186.24 Aligned_cols=249 Identities=22% Similarity=0.278 Sum_probs=196.0
Q ss_pred ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC--cEEEEEeCCCeEEE
Q psy4571 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE--YILATGSADKTVAL 176 (437)
Q Consensus 99 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~--~~l~sgs~dg~i~l 176 (437)
.+.+...|.++.-. +..+++|+.||.+++||.. ++......+|.++|.+++|...+. ..|++++.|.++++
T Consensus 101 ~~~hdDWVSsv~~~---~~~IltgsYDg~~riWd~~----Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~L 173 (423)
T KOG0313|consen 101 CFLHDDWVSSVKGA---SKWILTGSYDGTSRIWDLK----GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRL 173 (423)
T ss_pred cccchhhhhhhccc---CceEEEeecCCeeEEEecC----CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEE
Confidence 34455667777665 4789999999999999997 788889999999999888853222 25999999999999
Q ss_pred EeCCCCceee---eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCC------------CCCCCCCc
Q psy4571 177 WDLRNLKLKL---HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE------------DAEDGPPE 241 (437)
Q Consensus 177 wd~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------------~~~~~~~~ 241 (437)
|..+.+...+ ....+|...|.+++..++|. .+++|+.|.+|++|+..+.. ....+ ........
T Consensus 174 w~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgt-r~~SgS~D~~lkiWs~~~~~-~~~~E~~s~~rrk~~~~~~~~~~r~ 251 (423)
T KOG0313|consen 174 WKWNVGENKVKALKVCRGHKRSVDSVSVDSSGT-RFCSGSWDTMLKIWSVETDE-EDELESSSNRRRKKQKREKEGGTRT 251 (423)
T ss_pred EEecCchhhhhHHhHhcccccceeEEEecCCCC-eEEeecccceeeecccCCCc-cccccccchhhhhhhhhhhcccccC
Confidence 9998765422 23348999999999999998 59999999999999933221 11111 12233446
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
++.++.||+.+|.++.|++.+ .+.+++.|.+|+.||++++.....+.. .....++..+|...++++|+.|..
T Consensus 252 P~vtl~GHt~~Vs~V~w~d~~--v~yS~SwDHTIk~WDletg~~~~~~~~----~ksl~~i~~~~~~~Ll~~gssdr~-- 323 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSDAT--VIYSVSWDHTIKVWDLETGGLKSTLTT----NKSLNCISYSPLSKLLASGSSDRH-- 323 (423)
T ss_pred ceEEecccccceeeEEEcCCC--ceEeecccceEEEEEeecccceeeeec----CcceeEeecccccceeeecCCCCc--
Confidence 778899999999999999944 588999999999999999988777653 456677789999999999999998
Q ss_pred ccccccccccccccchhhh---hhhhhcCCCccccccCCCCCCcccccc--------ccccCH
Q psy4571 322 VHEKNYWQGLVLFDILVCE---EQRQLLGTEEESSDRHSSDNDTEDLNS--------IWSMTD 373 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~---~~~~~~~h~~~~~~~~~~~~~~~~~~~--------~w~~~~ 373 (437)
+++||-+++. ...++.||.+-|+.+.++|.......+ +|++..
T Consensus 324 ---------irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS 377 (423)
T KOG0313|consen 324 ---------IRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS 377 (423)
T ss_pred ---------eeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence 7888887764 336789999999999999976554433 888843
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-23 Score=174.44 Aligned_cols=259 Identities=14% Similarity=0.168 Sum_probs=200.2
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceEEEEEeeec
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFT 97 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~ 97 (437)
....-|.+++|++....+++.||.|++||+|+.+ .+.+++..|+.++..+ +.+.|+.+++||+..+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 3455688999995477888899999999999943 4779999998888776 6778999999999988
Q ss_pred ccc---ccCCCcceEEeeCCCCC--EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 98 QNF---PFPLSRQDVAWHLLHES--LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 98 ~~~---~~~~~v~~~~~sp~~~~--~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
+.. .|..+|.++.|-+ +.. .|++|+.|.+|+.||.+ ...++.++.- .+++.++..- .+ +++++..++
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R---~~~pv~t~~L-PeRvYa~Dv~--~p-m~vVata~r 176 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTR---SSNPVATLQL-PERVYAADVL--YP-MAVVATAER 176 (347)
T ss_pred CeeeeeecccceeEEEEec-CCCcceeEecccccceeecccC---CCCeeeeeec-cceeeehhcc--Cc-eeEEEecCC
Confidence 754 3678999999987 444 89999999999999999 5566666543 5567776553 34 689999999
Q ss_pred eEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc-
Q psy4571 173 TVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT- 250 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~- 250 (437)
.|.+++++.+........ ..+-.+.|++..++... .+.|+-+|.+.|..+........ ++++.|.
T Consensus 177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~-~alGsiEGrv~iq~id~~~~~~n------------FtFkCHR~ 243 (347)
T KOG0647|consen 177 HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDG-FALGSIEGRVAIQYIDDPNPKDN------------FTFKCHRS 243 (347)
T ss_pred cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCc-eEeeeecceEEEEecCCCCccCc------------eeEEEecc
Confidence 999999986433111111 12345789999998885 79999999999999987543222 3444554
Q ss_pred --------ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 251 --------AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 251 --------~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..|++|+|+|... .|+|+|.||++.+||-.....++..+. +...+..++|+.+|.+++-+.
T Consensus 244 ~~~~~~~VYaVNsi~FhP~hg-tlvTaGsDGtf~FWDkdar~kLk~s~~---~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 244 TNSVNDDVYAVNSIAFHPVHG-TLVTAGSDGTFSFWDKDARTKLKTSET---HPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred CCCCCCceEEecceEeecccc-eEEEecCCceEEEecchhhhhhhccCc---CCCccceeEecCCCCEEEEEe
Confidence 2688999999888 799999999999999887666655443 556677789999999888664
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=181.95 Aligned_cols=173 Identities=32% Similarity=0.679 Sum_probs=143.6
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+..+|.+++|||...++|++|+-||+|+|||++.......+ ..++|.+.|+-|.|+.... +||+|+.||+++|||++.
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~-~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAV-STKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQ 333 (440)
T ss_pred cccchhhhccCCccCceEEeeecCceEEEEEecCCCcccee-EeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhh
Confidence 56799999999999999999999999999999976443444 4489999999999999888 799999999999999996
Q ss_pred C--ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC-----CCCCCCCCceEEEecCccccEE
Q psy4571 182 L--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST-----EDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 182 ~--~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
. ..++..++-|..+|+++.|+|.....|++++.|.+|.+||+......... ....+.|+.+++...+.+ .+.
T Consensus 334 ~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQk-e~K 412 (440)
T KOG0302|consen 334 FKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQK-EVK 412 (440)
T ss_pred ccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchh-Hhh
Confidence 4 35677899999999999999988778999999999999999876542211 112345777888777754 789
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
.+.|+++-+.++++.+.||. .||
T Consensus 413 evhWH~QiPG~lvsTa~dGf-nVf 435 (440)
T KOG0302|consen 413 EVHWHRQIPGLLVSTAIDGF-NVF 435 (440)
T ss_pred hheeccCCCCeEEEecccce-eEE
Confidence 99999998889999999984 344
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=179.69 Aligned_cols=243 Identities=17% Similarity=0.264 Sum_probs=189.1
Q ss_pred EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc------CCC---------------
Q psy4571 82 SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT------RSH--------------- 136 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~------~~~--------------- 136 (437)
+++.|.+.++|.+..+.++ .+..+|++++|++ .+.++++++.|++-.||.. ...
T Consensus 165 tASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~-s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~s 243 (481)
T KOG0300|consen 165 TASADHTARIWSLESGACLATYTGHTGSVNSIKFHN-SGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHS 243 (481)
T ss_pred ecccccceeEEeeccccceeeecccccceeeEEecc-ccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcc
Confidence 4455666666665555443 3567899999999 6889999999999999972 110
Q ss_pred ----------------CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEE
Q psy4571 137 ----------------NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200 (437)
Q Consensus 137 ----------------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~ 200 (437)
....++..+.+|.+.|.+..|-..|+. +++++.|.+..+||++++.. +..+.+|....+.++
T Consensus 244 De~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q-~vTaSWDRTAnlwDVEtge~-v~~LtGHd~ELtHcs 321 (481)
T KOG0300|consen 244 DEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQ-MVTASWDRTANLWDVETGEV-VNILTGHDSELTHCS 321 (481)
T ss_pred cccccccccccccCCceeeeeeeeeeccccceEehhhhcCcce-eeeeeccccceeeeeccCce-eccccCcchhccccc
Confidence 011245677899999999999998885 99999999999999999665 889999999999999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
-+|..+ ++++.+.|.+.++||++.. ...+..+.||...|+++.|..+.+ +++|+.|.+|++||+
T Consensus 322 tHptQr-LVvTsSrDtTFRLWDFRea-------------I~sV~VFQGHtdtVTS~vF~~dd~--vVSgSDDrTvKvWdL 385 (481)
T KOG0300|consen 322 THPTQR-LVVTSSRDTTFRLWDFREA-------------IQSVAVFQGHTDTVTSVVFNTDDR--VVSGSDDRTVKVWDL 385 (481)
T ss_pred cCCcce-EEEEeccCceeEeccchhh-------------cceeeeecccccceeEEEEecCCc--eeecCCCceEEEeee
Confidence 999987 7999999999999999842 133567899999999999999887 779999999999999
Q ss_pred CCCC-CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh-----cCCCccccc
Q psy4571 281 STDS-DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL-----LGTEEESSD 354 (437)
Q Consensus 281 ~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~-----~~h~~~~~~ 354 (437)
++.. ++.++.. ......++.+..+..++.--.+.. +++||+. |..+..+ .||.--+.+
T Consensus 386 rNMRsplATIRt----dS~~NRvavs~g~~iIAiPhDNRq-----------vRlfDln-G~RlaRlPrtsRqgHrRMV~c 449 (481)
T KOG0300|consen 386 RNMRSPLATIRT----DSPANRVAVSKGHPIIAIPHDNRQ-----------VRLFDLN-GNRLARLPRTSRQGHRRMVTC 449 (481)
T ss_pred ccccCcceeeec----CCccceeEeecCCceEEeccCCce-----------EEEEecC-CCccccCCcccccccceeeee
Confidence 9874 4555553 234455667776777777666665 8889985 4444444 678777777
Q ss_pred cCCCC
Q psy4571 355 RHSSD 359 (437)
Q Consensus 355 ~~~~~ 359 (437)
.++..
T Consensus 450 ~AW~e 454 (481)
T KOG0300|consen 450 CAWLE 454 (481)
T ss_pred eeccc
Confidence 76654
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=183.03 Aligned_cols=274 Identities=17% Similarity=0.182 Sum_probs=223.7
Q ss_pred ecCCCceeEEEecCCC---C-eEEEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 63 KKNTPFLYDLVVNNYV---A-NISCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 63 ~~~~~~~~~~~~~~~~---~-~i~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
..|+..+.++++++-. - .|+++.|+.-.+-+-.++.= ..++..|.....+. +...-|+++.|-+-+|||.-
T Consensus 11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftakvw~a~ 89 (334)
T KOG0278|consen 11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAKVWDAV 89 (334)
T ss_pred cCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhhhhhhh
Confidence 3577788888886542 2 33677777665554333321 23667888888887 67778899999999999998
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
.+..+..+ .|+.-|..++|+.|..+ |++|+.+..+++||++..+.+...+.+|.+.|..+-|....+. ++++..
T Consensus 90 ---tgdelhsf-~hkhivk~~af~~ds~~-lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~-iLSSad 163 (334)
T KOG0278|consen 90 ---TGDELHSF-EHKHIVKAVAFSQDSNY-LLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKC-ILSSAD 163 (334)
T ss_pred ---hhhhhhhh-hhhheeeeEEecccchh-hhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCce-EEeecc
Confidence 45556665 58889999999999997 9999999999999999988888899999999999999988775 677799
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
|++||+||.+++..++++ .-+.+|+++..+++|+ ++ +-...+.|++||..+...++.+..
T Consensus 164 d~tVRLWD~rTgt~v~sL---------------~~~s~VtSlEvs~dG~-il-Tia~gssV~Fwdaksf~~lKs~k~--- 223 (334)
T KOG0278|consen 164 DKTVRLWDHRTGTEVQSL---------------EFNSPVTSLEVSQDGR-IL-TIAYGSSVKFWDAKSFGLLKSYKM--- 223 (334)
T ss_pred CCceEEEEeccCcEEEEE---------------ecCCCCcceeeccCCC-EE-EEecCceeEEeccccccceeeccC---
Confidence 999999999998766552 1245799999999999 44 667788999999999988888875
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh-cCCCccccccCCCCCCcccccc------
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL-LGTEEESSDRHSSDNDTEDLNS------ 367 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~-~~h~~~~~~~~~~~~~~~~~~~------ 367 (437)
...+.+++.+|+...++.|+.|.. ++.+|..||+++..+ +||..+|-++.|+|+|...++.
T Consensus 224 -P~nV~SASL~P~k~~fVaGged~~-----------~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi 291 (334)
T KOG0278|consen 224 -PCNVESASLHPKKEFFVAGGEDFK-----------VYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI 291 (334)
T ss_pred -ccccccccccCCCceEEecCcceE-----------EEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceE
Confidence 345667789999999999999988 799999999999886 9999999999999999887765
Q ss_pred -ccccCHHH
Q psy4571 368 -IWSMTDEQ 375 (437)
Q Consensus 368 -~w~~~~~~ 375 (437)
+|.++..+
T Consensus 292 rlWQt~~~~ 300 (334)
T KOG0278|consen 292 RLWQTTPGK 300 (334)
T ss_pred EEEEecCCC
Confidence 89886544
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-23 Score=193.37 Aligned_cols=252 Identities=18% Similarity=0.236 Sum_probs=191.8
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeE-EEecCC---------------CCeEEEecCceEEEEEeeecccc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYD-LVVNNY---------------VANISCILNISILFFEIIFTQNF 100 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~-~~~~~~---------------~~~i~~~~~~~i~~~~~~~~~~~ 100 (437)
|-.+++. ++..++++|+|+++|+|+.+.+.... ..+.+. ...+....|..|.+|.......+
T Consensus 17 Vr~v~~~--~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~ 94 (745)
T KOG0301|consen 17 VRAVAVT--DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPL 94 (745)
T ss_pred hheeEec--CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCch
Confidence 3344544 34578999999999999975433222 111111 12345567888999987655543
Q ss_pred ----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 101 ----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 101 ----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
.|...|.|++-.. ...+++|+.|.++++|... +....+.+|+..|++++.-|++. ++||+.|.+|++
T Consensus 95 ~~LkgH~snVC~ls~~~--~~~~iSgSWD~TakvW~~~-----~l~~~l~gH~asVWAv~~l~e~~--~vTgsaDKtIkl 165 (745)
T KOG0301|consen 95 YTLKGHKSNVCSLSIGE--DGTLISGSWDSTAKVWRIG-----ELVYSLQGHTASVWAVASLPENT--YVTGSADKTIKL 165 (745)
T ss_pred hhhhccccceeeeecCC--cCceEecccccceEEecch-----hhhcccCCcchheeeeeecCCCc--EEeccCcceeee
Confidence 3566777777654 3348899999999999876 44556899999999999999884 899999999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
|.-. +. +.++.+|.+-|..+++-|++. |++++.||.|+.|++.. +.+..+.+|+..|.++
T Consensus 166 Wk~~--~~-l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~~g---------------e~l~~~~ghtn~vYsi 225 (745)
T KOG0301|consen 166 WKGG--TL-LKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDLDG---------------EVLLEMHGHTNFVYSI 225 (745)
T ss_pred ccCC--ch-hhhhccchhheeeeEEecCCC--eEeecCCceEEEEeccC---------------ceeeeeeccceEEEEE
Confidence 9874 33 788999999999999999875 78999999999999955 4567789999999999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
+..++++ ++++++.|+++++|+.. ++.+.+.. +...+.++.+-++|. +++|+.||.++++...
T Consensus 226 s~~~~~~-~Ivs~gEDrtlriW~~~--e~~q~I~l---PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 226 SMALSDG-LIVSTGEDRTLRIWKKD--ECVQVITL---PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred EecCCCC-eEEEecCCceEEEeecC--ceEEEEec---CccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 9777777 79999999999999987 56676664 234566666667776 4566678887666443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-25 Score=207.31 Aligned_cols=231 Identities=20% Similarity=0.283 Sum_probs=201.9
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.|...+.++..-. ....+++|+.|..+.+|.+. ....+..+.+|..+|.++.|+++.. +|++|+.+|+|++||+.
T Consensus 26 ~hsaav~~lk~~~-s~r~~~~Gg~~~k~~L~~i~---kp~~i~S~~~hespIeSl~f~~~E~-LlaagsasgtiK~wDle 100 (825)
T KOG0267|consen 26 AHSAAVGCLKIRK-SSRSLVTGGEDEKVNLWAIG---KPNAITSLTGHESPIESLTFDTSER-LLAAGSASGTIKVWDLE 100 (825)
T ss_pred hhhhhhceeeeec-cceeeccCCCceeecccccc---CCchhheeeccCCcceeeecCcchh-hhcccccCCceeeeehh
Confidence 3455666776633 67889999999999999987 4455566889999999999999887 69999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
..+. ++++.+|...+.++.|+|.+.+ +++|+.|+.+++||.+...+. +.+.+|...|..+.|+|
T Consensus 101 eAk~-vrtLtgh~~~~~sv~f~P~~~~-~a~gStdtd~~iwD~Rk~Gc~--------------~~~~s~~~vv~~l~lsP 164 (825)
T KOG0267|consen 101 EAKI-VRTLTGHLLNITSVDFHPYGEF-FASGSTDTDLKIWDIRKKGCS--------------HTYKSHTRVVDVLRLSP 164 (825)
T ss_pred hhhh-hhhhhccccCcceeeeccceEE-eccccccccceehhhhccCce--------------eeecCCcceeEEEeecC
Confidence 8776 8899999999999999999985 799999999999999976543 45788999999999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+|+ +++.|+.|..+++||+..|+....+.. +...+..+.|+|...++++|+.|++ +++||+.+.+
T Consensus 165 ~Gr-~v~~g~ed~tvki~d~~agk~~~ef~~---~e~~v~sle~hp~e~Lla~Gs~d~t-----------v~f~dletfe 229 (825)
T KOG0267|consen 165 DGR-WVASGGEDNTVKIWDLTAGKLSKEFKS---HEGKVQSLEFHPLEVLLAPGSSDRT-----------VRFWDLETFE 229 (825)
T ss_pred CCc-eeeccCCcceeeeeccccccccccccc---ccccccccccCchhhhhccCCCCce-----------eeeeccceeE
Confidence 999 788999999999999999999888875 4566777889999999999999999 8999999999
Q ss_pred hhhhhcCCCccccccCCCCCCcccccc
Q psy4571 341 EQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 341 ~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+.........+.+..|++++..++.+
T Consensus 230 ~I~s~~~~~~~v~~~~fn~~~~~~~~G 256 (825)
T KOG0267|consen 230 VISSGKPETDGVRSLAFNPDGKIVLSG 256 (825)
T ss_pred EeeccCCccCCceeeeecCCceeeecC
Confidence 998888888899999999999876654
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-24 Score=198.77 Aligned_cols=234 Identities=18% Similarity=0.217 Sum_probs=192.8
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCC---CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc-
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNV---SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK- 183 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~- 183 (437)
.+..++.++++|++|+.||.|++|+...... ......++.|..-|+.+....+++. |+++|.|-+|++|+.....
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~t-lIS~SsDtTVK~W~~~~~~~ 107 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKT-LISASSDTTVKVWNAHKDNT 107 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCc-eEEecCCceEEEeecccCcc
Confidence 4555555788899999999999999875422 1236778899999999999999985 9999999999999998753
Q ss_pred eeeeEeccCCCceEEEEE-cCCCCcEEEEEeCCCeEEEEEcCCCCC--CCCCCCCCCCCCceEEEec-CccccEEEEEEc
Q psy4571 184 LKLHSFESHKDEIFQVQW-SPHNETILASSGTDRRLHVWDLSKIGE--EQSTEDAEDGPPELLFIHG-GHTAKISDFSWN 259 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~-~p~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~ 259 (437)
.++.++..|.+-|.|+++ .++.. ++|+||.|+.|.+||+..+.. ..+... .....+. |+...|++++.+
T Consensus 108 ~c~stir~H~DYVkcla~~ak~~~-lvaSgGLD~~IflWDin~~~~~l~~s~n~------~t~~sl~sG~k~siYSLA~N 180 (735)
T KOG0308|consen 108 FCMSTIRTHKDYVKCLAYIAKNNE-LVASGGLDRKIFLWDINTGTATLVASFNN------VTVNSLGSGPKDSIYSLAMN 180 (735)
T ss_pred hhHhhhhcccchheeeeecccCce-eEEecCCCccEEEEEccCcchhhhhhccc------cccccCCCCCccceeeeecC
Confidence 567888999999999999 56555 899999999999999997732 111110 1111122 889999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+.|. ++++|+..+.+++||.++++.+..+.. |...+..+..++||+.+.+++.|++ |++||+...
T Consensus 181 ~t~t-~ivsGgtek~lr~wDprt~~kimkLrG---HTdNVr~ll~~dDGt~~ls~sSDgt-----------IrlWdLgqQ 245 (735)
T KOG0308|consen 181 QTGT-IIVSGGTEKDLRLWDPRTCKKIMKLRG---HTDNVRVLLVNDDGTRLLSASSDGT-----------IRLWDLGQQ 245 (735)
T ss_pred Ccce-EEEecCcccceEEeccccccceeeeec---cccceEEEEEcCCCCeEeecCCCce-----------EEeeecccc
Confidence 9997 899999999999999999887777764 6677777799999999999999999 999999999
Q ss_pred hhhhhhcCCCccccccCCCCCCccc
Q psy4571 340 EEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 340 ~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
+++.++..|.+.+.++..+|+-..+
T Consensus 246 rCl~T~~vH~e~VWaL~~~~sf~~v 270 (735)
T KOG0308|consen 246 RCLATYIVHKEGVWALQSSPSFTHV 270 (735)
T ss_pred ceeeeEEeccCceEEEeeCCCcceE
Confidence 9999999999999999877754433
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=182.89 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=192.4
Q ss_pred CcceEEEeeccCceEeeecCC-CceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEEC
Q psy4571 46 FDDAVEERVINEEYKIWKKNT-PFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVAD 124 (437)
Q Consensus 46 ~~~~l~tgs~d~~v~iw~~~~-~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~ 124 (437)
.++++|.|.+|..|.|||... ..++-....+....- ..+...-+....-.|...|.+++|+..-.++||+|+.
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk------~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsa 264 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASK------KKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSA 264 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhh------hhhhhcccccccccchHHHHHHHhccccceeEEecCC
Confidence 378999999999999999643 111111111100000 0000000000011255678899999988899999999
Q ss_pred CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCC
Q psy4571 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204 (437)
Q Consensus 125 dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~ 204 (437)
|.+|++||+. .+++..++..|.+.|.+++|+|....+|++|+.|++|.+.|.|.....-..++ ..+.|..++|.|.
T Consensus 265 D~TV~lWD~~---~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~ 340 (463)
T KOG0270|consen 265 DKTVKLWDVD---TGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPH 340 (463)
T ss_pred CceEEEEEcC---CCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCC
Confidence 9999999999 66778888889999999999999888899999999999999996443222332 4688999999999
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 205 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
....++++..||+|+-+|+|... +++++.+.|.++|++|++++.-+++++|++.|+.+++|++....
T Consensus 341 se~~f~~~tddG~v~~~D~R~~~-------------~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 341 SENSFFVSTDDGTVYYFDIRNPG-------------KPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred CceeEEEecCCceEEeeecCCCC-------------CceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence 88888899999999999999853 56788999999999999999999999999999999999998654
Q ss_pred CceeeeeeecccCCceeeeecCCCC-cccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 285 DTKTMRLDSIRSNGGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
...... +....+...+.++.|+-- +++.|+..+. +++||+.++..++.-.
T Consensus 408 ~~~v~~-~~~~~~rl~c~~~~~~~a~~la~GG~k~~-----------~~vwd~~~~~~V~kaF 458 (463)
T KOG0270|consen 408 PKSVKE-HSFKLGRLHCFALDPDVAFTLAFGGEKAV-----------LRVWDIFTNSPVRKAF 458 (463)
T ss_pred Cccccc-ccccccceeecccCCCcceEEEecCccce-----------EEEeecccChhHHHhh
Confidence 422221 111112223335555543 5566665554 8999999987765443
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-22 Score=167.51 Aligned_cols=232 Identities=22% Similarity=0.225 Sum_probs=188.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.|.++++.+.++. ++.+|.+++.|.+..||-.. .++.+-++.+|++.|+|+..+.+.++ +++|+.|.+++|||+.
T Consensus 8 GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~---nGerlGty~GHtGavW~~Did~~s~~-liTGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 8 GHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSL---NGERLGTYDGHTGAVWCCDIDWDSKH-LITGSADQTAKLWDVE 82 (327)
T ss_pred cCccccceEEecC-CCcEEEEecCCCCceEEEec---CCceeeeecCCCceEEEEEecCCcce-eeeccccceeEEEEcC
Confidence 3678999999999 78999999999999999876 57889999999999999999999996 9999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEE----eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASS----GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
+++. +..++ ...+|..+.|+++|..++++. +..+.|.++|++....... ..+++.....+.+.++.+
T Consensus 83 tGk~-la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~-------s~ep~~kI~t~~skit~a 153 (327)
T KOG0643|consen 83 TGKQ-LATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDID-------SEEPYLKIPTPDSKITSA 153 (327)
T ss_pred CCcE-EEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhc-------ccCceEEecCCccceeee
Confidence 9887 66665 578999999999998544443 2346799999986543221 224456667778899999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
-|.|-++ .|++|..||.|.+||+++++.... ....|...+..+.++||..++++++.|.+ -++||.
T Consensus 154 ~Wg~l~~-~ii~Ghe~G~is~~da~~g~~~v~--s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt-----------akl~D~ 219 (327)
T KOG0643|consen 154 LWGPLGE-TIIAGHEDGSISIYDARTGKELVD--SDEEHSSKINDLQFSRDRTYFITGSKDTT-----------AKLVDV 219 (327)
T ss_pred eecccCC-EEEEecCCCcEEEEEcccCceeee--chhhhccccccccccCCcceEEecccCcc-----------ceeeec
Confidence 9999999 788999999999999999854332 22335567788899999999999999999 477787
Q ss_pred hhhhhhhhhcCCCccccccCCCCCC
Q psy4571 337 LVCEEQRQLLGTEEESSDRHSSDND 361 (437)
Q Consensus 337 ~~~~~~~~~~~h~~~~~~~~~~~~~ 361 (437)
.+-+.++++..- .+++..+++|..
T Consensus 220 ~tl~v~Kty~te-~PvN~aaisP~~ 243 (327)
T KOG0643|consen 220 RTLEVLKTYTTE-RPVNTAAISPLL 243 (327)
T ss_pred cceeeEEEeeec-ccccceeccccc
Confidence 777777766554 378888888843
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-22 Score=191.47 Aligned_cols=273 Identities=14% Similarity=0.170 Sum_probs=204.6
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
.+..|-..+||. |+++.|.|++.|+.||+|+.....- .|. .+.. ....|.+++-
T Consensus 11 aht~G~t~i~~d-~~gefi~tcgsdg~ir~~~~~sd~e-----~P~--ti~~------------------~g~~v~~ia~ 64 (933)
T KOG1274|consen 11 AHTGGLTLICYD-PDGEFICTCGSDGDIRKWKTNSDEE-----EPE--TIDI------------------SGELVSSIAC 64 (933)
T ss_pred hccCceEEEEEc-CCCCEEEEecCCCceEEeecCCccc-----CCc--hhhc------------------cCceeEEEee
Confidence 456667789999 9999999999999999999654310 000 0000 1123334433
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
..++|++|+.+++|.+|....++....+.. .+-++.+++|+-+|.+ ++.|+.|-.|++-++.+... ...+++
T Consensus 65 ---~s~~f~~~s~~~tv~~y~fps~~~~~iL~R---ftlp~r~~~v~g~g~~-iaagsdD~~vK~~~~~D~s~-~~~lrg 136 (933)
T KOG1274|consen 65 ---YSNHFLTGSEQNTVLRYKFPSGEEDTILAR---FTLPIRDLAVSGSGKM-IAAGSDDTAVKLLNLDDSSQ-EKVLRG 136 (933)
T ss_pred ---cccceEEeeccceEEEeeCCCCCccceeee---eeccceEEEEecCCcE-EEeecCceeEEEEeccccch-heeecc
Confidence 456899999999999999986554444444 3668999999999995 99999999999999998666 788999
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc-cccEEEEEEccCCCeEEEEEe
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH-TAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~~~~~l~s~~ 270 (437)
|.++|.++.|+|.+. +||+.+.||.|++||+..+.....+..... ....- ...+..++|+|+|. .++..+
T Consensus 137 h~apVl~l~~~p~~~-fLAvss~dG~v~iw~~~~~~~~~tl~~v~k-------~n~~~~s~i~~~~aW~Pk~g-~la~~~ 207 (933)
T KOG1274|consen 137 HDAPVLQLSYDPKGN-FLAVSSCDGKVQIWDLQDGILSKTLTGVDK-------DNEFILSRICTRLAWHPKGG-TLAVPP 207 (933)
T ss_pred cCCceeeeeEcCCCC-EEEEEecCceEEEEEcccchhhhhcccCCc-------cccccccceeeeeeecCCCC-eEEeec
Confidence 999999999999998 699999999999999998765554321100 01111 45678899999987 566778
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
.|+.|++|+..+.+....+.....+ .....+.|+|+|+++|+++-++. |.+||..+.+. .....
T Consensus 208 ~d~~Vkvy~r~~we~~f~Lr~~~~s-s~~~~~~wsPnG~YiAAs~~~g~-----------I~vWnv~t~~~----~~~~~ 271 (933)
T KOG1274|consen 208 VDNTVKVYSRKGWELQFKLRDKLSS-SKFSDLQWSPNGKYIAASTLDGQ-----------ILVWNVDTHER----HEFKR 271 (933)
T ss_pred cCCeEEEEccCCceeheeecccccc-cceEEEEEcCCCcEEeeeccCCc-----------EEEEecccchh----ccccc
Confidence 8999999999999888887765433 33667799999999999999998 78888887332 22334
Q ss_pred cccccCCCCCCcc
Q psy4571 351 ESSDRHSSDNDTE 363 (437)
Q Consensus 351 ~~~~~~~~~~~~~ 363 (437)
.|.+..+.|+...
T Consensus 272 ~Vc~~aw~p~~n~ 284 (933)
T KOG1274|consen 272 AVCCEAWKPNANA 284 (933)
T ss_pred eeEEEecCCCCCe
Confidence 5666677776654
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-23 Score=177.05 Aligned_cols=239 Identities=14% Similarity=0.154 Sum_probs=197.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
-..|.|++|+ .+.+++++|+.||.||+|+..+|.+.... ...+...|+|+.|+.
T Consensus 263 d~aVlci~FS-RDsEMlAsGsqDGkIKvWri~tG~ClRrF-------------------------drAHtkGvt~l~FSr 316 (508)
T KOG0275|consen 263 DDAVLCISFS-RDSEMLASGSQDGKIKVWRIETGQCLRRF-------------------------DRAHTKGVTCLSFSR 316 (508)
T ss_pred ccceEEEeec-ccHHHhhccCcCCcEEEEEEecchHHHHh-------------------------hhhhccCeeEEEEcc
Confidence 3468999999 99999999999999999999888775331 123567899999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES-- 191 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~-- 191 (437)
++..+++++.|.++++.-++ .++.++.+.+|...|+...|.++|.+ +++++.||+|++|+.++.++ +.+++.
T Consensus 317 -D~SqiLS~sfD~tvRiHGlK---SGK~LKEfrGHsSyvn~a~ft~dG~~-iisaSsDgtvkvW~~KtteC-~~Tfk~~~ 390 (508)
T KOG0275|consen 317 -DNSQILSASFDQTVRIHGLK---SGKCLKEFRGHSSYVNEATFTDDGHH-IISASSDGTVKVWHGKTTEC-LSTFKPLG 390 (508)
T ss_pred -CcchhhcccccceEEEeccc---cchhHHHhcCccccccceEEcCCCCe-EEEecCCccEEEecCcchhh-hhhccCCC
Confidence 56778899999999999999 67889999999999999999999997 99999999999999999554 777653
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec---CccccEEEEEEccCCCeEEEE
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG---GHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~p~~~~~l~s 268 (437)
...+|+++-.-|.++.-++.|...++|.|-++... .++.+. ...+..-+...+|.|. .+.+
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQ---------------vVrsfsSGkREgGdFi~~~lSpkGe-wiYc 454 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQ---------------VVRSFSSGKREGGDFINAILSPKGE-WIYC 454 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccce---------------EEeeeccCCccCCceEEEEecCCCc-EEEE
Confidence 44678999998887777889989999999998652 222222 1234455667899999 5778
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.+.|+.++.+...+|+....+.. +...++.++-+|..+.+|+-+.|+..++|
T Consensus 455 igED~vlYCF~~~sG~LE~tl~V---hEkdvIGl~HHPHqNllAsYsEDgllKLW 506 (508)
T KOG0275|consen 455 IGEDGVLYCFSVLSGKLERTLPV---HEKDVIGLTHHPHQNLLASYSEDGLLKLW 506 (508)
T ss_pred EccCcEEEEEEeecCceeeeeec---ccccccccccCcccchhhhhcccchhhhc
Confidence 89999999999999998888775 56777888889999999999999995444
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-21 Score=167.08 Aligned_cols=265 Identities=15% Similarity=0.185 Sum_probs=205.3
Q ss_pred CceeEEEecCCCC-eEEEecCceEEEEEeeec---cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe
Q psy4571 67 PFLYDLVVNNYVA-NISCILNISILFFEIIFT---QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS 142 (437)
Q Consensus 67 ~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~---~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 142 (437)
..+.++.+++... .++.+.||+++++|.... ..+.+..++.+++|.+ ...+++|+.||.|+.+|+.++ ..
T Consensus 14 d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~----~~ 87 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYDLNTG----NE 87 (323)
T ss_pred hceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC--CceEEEeccCceEEEEEecCC----cc
Confidence 3455666665544 457789999999997543 4566788999999997 567889999999999999843 33
Q ss_pred eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 143 ~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
..+..|..+|.|+.+++... .+++|+.|++|++||.+. +.+...+. ....|.++... +. .|+.|+.|..+.+||
T Consensus 88 ~~igth~~~i~ci~~~~~~~-~vIsgsWD~~ik~wD~R~-~~~~~~~d-~~kkVy~~~v~--g~-~LvVg~~~r~v~iyD 161 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVG-CVISGSWDKTIKFWDPRN-KVVVGTFD-QGKKVYCMDVS--GN-RLVVGTSDRKVLIYD 161 (323)
T ss_pred eeeccCCCceEEEEeeccCC-eEEEcccCccEEEEeccc-cccccccc-cCceEEEEecc--CC-EEEEeecCceEEEEE
Confidence 45668999999999998666 599999999999999997 33244443 34588888876 44 478889999999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC----CCceeeeeeeccc--
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD----SDTKTMRLDSIRS-- 296 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~-- 296 (437)
+++.....+.. -..-+..+++|++.|++. -++.++-||.|.+=.++.. +....++.+....
T Consensus 162 LRn~~~~~q~r------------eS~lkyqtR~v~~~pn~e-Gy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~ 228 (323)
T KOG1036|consen 162 LRNLDEPFQRR------------ESSLKYQTRCVALVPNGE-GYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKD 228 (323)
T ss_pred cccccchhhhc------------cccceeEEEEEEEecCCC-ceEEEeecceEEEEccCCchHHhhhceeEEeeecccCC
Confidence 99987554311 223456789999999777 5678999999998777765 2223333332222
Q ss_pred ----CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 297 ----NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 297 ----~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
..+..++|+|-...+++|+.||. +.+||..+.+.+..+.+.+..+..+.|+.+|..++..
T Consensus 229 ~~~~yPVNai~Fhp~~~tfaTgGsDG~-----------V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia 292 (323)
T KOG1036|consen 229 TEIIYPVNAIAFHPIHGTFATGGSDGI-----------VNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIA 292 (323)
T ss_pred ceEEEEeceeEeccccceEEecCCCce-----------EEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEE
Confidence 23455699999999999999999 8999999999999999998889999999999987764
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=177.69 Aligned_cols=169 Identities=22% Similarity=0.415 Sum_probs=142.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
...-..++|||.....|++|.--+.|++|...++.-..--..+.+|+..|-.++|||....+|+|||.||+|+|||+|.+
T Consensus 211 k~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~ 290 (440)
T KOG0302|consen 211 KGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSG 290 (440)
T ss_pred CccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCC
Confidence 34557899999767778899888999999998643222234456799999999999998889999999999999999986
Q ss_pred c-eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 K-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
. .+....+.|.+.|+.|.|+...+ +||+|+.||+++|||++..+.. .++..++-|+.+|++|.|+|.
T Consensus 291 ~~~~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~~-----------~pVA~fk~Hk~pItsieW~p~ 358 (440)
T KOG0302|consen 291 PKKAAVSTKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKSG-----------QPVATFKYHKAPITSIEWHPH 358 (440)
T ss_pred CccceeEeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccCC-----------CcceeEEeccCCeeEEEeccc
Confidence 3 22334488999999999999888 7999999999999999986543 456789999999999999998
Q ss_pred CCeEEEEEeCCCeEEEEeCCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
....+++++.|.+|.+||+...
T Consensus 359 e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 359 EDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred cCceEEeccCCCcEEEEEeecc
Confidence 8778999999999999998754
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-23 Score=191.64 Aligned_cols=313 Identities=16% Similarity=0.234 Sum_probs=225.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------------------------------CceeEEEecCCC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------------------------------PFLYDLVVNNYV 78 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------------------------------~~~~~~~~~~~~ 78 (437)
.-...|+|.+ .++|+.|..+++||+++..+ .....+.|.+..
T Consensus 260 TTnAnCIcVs---~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~ 336 (1080)
T KOG1408|consen 260 TTNANCICVS---SRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETT 336 (1080)
T ss_pred ccccceeeee---cceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCC
Confidence 4445667766 78999999999999999321 124456666677
Q ss_pred CeEEEe-cCceEEEEEeeecccc-------ccCCCcceEEeeCC----------CCCEEEEEECCCcEEEEEcCCCCCCC
Q psy4571 79 ANISCI-LNISILFFEIIFTQNF-------PFPLSRQDVAWHLL----------HESLFGSVADDQKLMIWDTRSHNVSK 140 (437)
Q Consensus 79 ~~i~~~-~~~~i~~~~~~~~~~~-------~~~~~v~~~~~sp~----------~~~~l~~~~~dg~v~vwd~~~~~~~~ 140 (437)
..++|. .|.++.+||+....+. -|...|.++.--|. -...|.+++.|++||+||+.......
T Consensus 337 ~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~ 416 (1080)
T KOG1408|consen 337 DKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQ 416 (1080)
T ss_pred ceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccc
Confidence 777665 6789999997644332 23444555444331 13468999999999999997521111
Q ss_pred Ce----------------------------------eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 141 PS----------------------------------HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 141 ~~----------------------------------~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.. ...-.....+.+++.+|+|++ ||+|..-|+++++++...+. .
T Consensus 417 vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh-LAsGDr~GnlrVy~Lq~l~~-~ 494 (1080)
T KOG1408|consen 417 VYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH-LASGDRGGNLRVYDLQELEY-T 494 (1080)
T ss_pred eeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce-ecccCccCceEEEEehhhhh-h
Confidence 10 001122357999999999997 99999999999999998665 7
Q ss_pred eEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC-C
Q psy4571 187 HSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE-P 263 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~-~ 263 (437)
..+.+|...|.|+.|+.. +..+||+++.|..|+|||+...- .++.++.+|...|+++.|...| +
T Consensus 495 ~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny-------------~l~qtld~HSssITsvKFa~~gln 561 (1080)
T KOG1408|consen 495 CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY-------------DLVQTLDGHSSSITSVKFACNGLN 561 (1080)
T ss_pred hheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc-------------chhhhhcccccceeEEEEeecCCc
Confidence 778899999999999742 34489999999999999997643 3455689999999999998766 4
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeee--eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMR--LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
..+++++.|..|++--.+.......+. .....+.....++..|..+++++++.|.. |+++|+.+|+.
T Consensus 562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrn-----------irif~i~sgKq 630 (1080)
T KOG1408|consen 562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRN-----------IRIFDIESGKQ 630 (1080)
T ss_pred eEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccc-----------eEEEeccccce
Confidence 468899999888654433222222221 11223345566799999999999999998 89999999999
Q ss_pred hhhhcC---CCccccccCCCCCCcccccc-------cccc-CHHH
Q psy4571 342 QRQLLG---TEEESSDRHSSDNDTEDLNS-------IWSM-TDEQ 375 (437)
Q Consensus 342 ~~~~~~---h~~~~~~~~~~~~~~~~~~~-------~w~~-~~~~ 375 (437)
.+.++| |++....+...|.|.+++.+ +++. ++|.
T Consensus 631 ~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEc 675 (1080)
T KOG1408|consen 631 VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGEC 675 (1080)
T ss_pred eeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchh
Confidence 999966 44445556678888877765 6666 4443
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=183.66 Aligned_cols=258 Identities=16% Similarity=0.203 Sum_probs=204.5
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN 99 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~ 99 (437)
|-++..+ ...+.+.||+ .|-||||+.. ...+......++++.+ +.+...++.|||+.....
T Consensus 422 VcAvtIS-~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTp 499 (705)
T KOG0639|consen 422 VCAVTIS-NPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTP 499 (705)
T ss_pred EEEEEec-CCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCc
Confidence 3445566 5567888887 5679999943 2334455556666655 445567899999764321
Q ss_pred -c--cc---CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 100 -F--PF---PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 100 -~--~~---~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
+ .. ...+.+++.+| +.++.+++..||.|.|||+. ....++.+++|++.+.||..+++|.+ |-||+-|.+
T Consensus 500 rikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLh---nq~~VrqfqGhtDGascIdis~dGtk-lWTGGlDnt 574 (705)
T KOG0639|consen 500 RIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISKDGTK-LWTGGLDNT 574 (705)
T ss_pred chhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEcc---cceeeecccCCCCCceeEEecCCCce-eecCCCccc
Confidence 1 11 23678899999 67888889999999999999 66788999999999999999999997 999999999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
|+-||+++++. +... .....|.++..+|++.+ ++.|-.++.+.|........ +.+.-|.+-|
T Consensus 575 vRcWDlregrq-lqqh-dF~SQIfSLg~cP~~dW-lavGMens~vevlh~skp~k---------------yqlhlheScV 636 (705)
T KOG0639|consen 575 VRCWDLREGRQ-LQQH-DFSSQIFSLGYCPTGDW-LAVGMENSNVEVLHTSKPEK---------------YQLHLHESCV 636 (705)
T ss_pred eeehhhhhhhh-hhhh-hhhhhheecccCCCccc-eeeecccCcEEEEecCCccc---------------eeecccccEE
Confidence 99999998665 3322 34678999999999995 99999999998887766432 3367789999
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.++.|.+.|+ .+++.+.|+.+..|...-|..+.... ....+.++.+|.|.+++++|+.|..+.+|+
T Consensus 637 LSlKFa~cGk-wfvStGkDnlLnawrtPyGasiFqsk----E~SsVlsCDIS~ddkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 637 LSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISFDDKYIVTGSGDKKATVYE 702 (705)
T ss_pred EEEEecccCc-eeeecCchhhhhhccCccccceeecc----ccCcceeeeeccCceEEEecCCCcceEEEE
Confidence 9999999999 57799999999999988876655443 567888999999999999999998876664
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-24 Score=199.75 Aligned_cols=193 Identities=21% Similarity=0.389 Sum_probs=169.8
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.+..+|.++.|++ .+.+|++|+.+|+|++||++ ..+.++++.+|...+.++.|+|.+.+ .++|+.|+.+++||.+
T Consensus 68 ~hespIeSl~f~~-~E~LlaagsasgtiK~wDle---eAk~vrtLtgh~~~~~sv~f~P~~~~-~a~gStdtd~~iwD~R 142 (825)
T KOG0267|consen 68 GHESPIESLTFDT-SERLLAAGSASGTIKVWDLE---EAKIVRTLTGHLLNITSVDFHPYGEF-FASGSTDTDLKIWDIR 142 (825)
T ss_pred ccCCcceeeecCc-chhhhcccccCCceeeeehh---hhhhhhhhhccccCcceeeeccceEE-eccccccccceehhhh
Confidence 4668999999999 78999999999999999999 67888899999999999999999997 8999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
... |...+.+|...|.+++|+|+|+ ++++|+.|..+++||+..++... .+++|...+..+.|+|
T Consensus 143 k~G-c~~~~~s~~~vv~~l~lsP~Gr-~v~~g~ed~tvki~d~~agk~~~--------------ef~~~e~~v~sle~hp 206 (825)
T KOG0267|consen 143 KKG-CSHTYKSHTRVVDVLRLSPDGR-WVASGGEDNTVKIWDLTAGKLSK--------------EFKSHEGKVQSLEFHP 206 (825)
T ss_pred ccC-ceeeecCCcceeEEEeecCCCc-eeeccCCcceeeeeccccccccc--------------ccccccccccccccCc
Confidence 744 4888999999999999999999 59999999999999998875443 4889999999999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
..- ++++|+.|+++++||+++.+.+..... ...++.+.+|+|+|..+.+|....
T Consensus 207 ~e~-Lla~Gs~d~tv~f~dletfe~I~s~~~---~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 207 LEV-LLAPGSSDRTVRFWDLETFEVISSGKP---ETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred hhh-hhccCCCCceeeeeccceeEEeeccCC---ccCCceeeeecCCceeeecCchhh
Confidence 887 999999999999999997655444332 356778889999999999997654
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-23 Score=202.12 Aligned_cols=226 Identities=23% Similarity=0.389 Sum_probs=180.0
Q ss_pred CcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCC---------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 105 SRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHN---------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~---------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
.|.+++.+| ++..+|+|+ .||.++||+.+.-. ..+.+.....|.+.|+|+.|+|||++ ||+|++|+.
T Consensus 15 ~IfSIdv~p-dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~-lAsGSDD~~ 92 (942)
T KOG0973|consen 15 SIFSIDVHP-DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSY-LASGSDDRL 92 (942)
T ss_pred eEEEEEecC-CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCe-EeeccCcce
Confidence 477899999 789999999 89999999875311 24556777889999999999999997 999999999
Q ss_pred EEEEeCCC------Cc-----------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 174 VALWDLRN------LK-----------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 174 i~lwd~~~------~~-----------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
|.+|+... .. .....+.+|...|..++|+|++. +|++++.|++|.+|+.++..
T Consensus 93 v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s~DnsViiwn~~tF~--------- 162 (942)
T KOG0973|consen 93 VMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVSLDNSVIIWNAKTFE--------- 162 (942)
T ss_pred EEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEecccceEEEEccccce---------
Confidence 99999872 10 13667889999999999999998 69999999999999999863
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC---CceeeeecCCCCcccc
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN---GGISSTASPTASSTAS 313 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~s~~g~~l~s 313 (437)
.+.++.+|.+.|..+.|.|-|+ +|++-+.|++|++|+..+....+.+.....+.. -...+.|||||.+|++
T Consensus 163 -----~~~vl~~H~s~VKGvs~DP~Gk-y~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 163 -----LLKVLRGHQSLVKGVSWDPIGK-YFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred -----eeeeeecccccccceEECCccC-eeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecc
Confidence 3456899999999999999999 899999999999999877666666553332222 2344599999999998
Q ss_pred cCC----CCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 314 ESP----TPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 314 ~s~----d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
.-. -.+ +.+.+-.+-+.-..+.||..++.++.|+|
T Consensus 237 ~nA~n~~~~~-----------~~IieR~tWk~~~~LvGH~~p~evvrFnP 275 (942)
T KOG0973|consen 237 PNAVNGGKST-----------IAIIERGTWKVDKDLVGHSAPVEVVRFNP 275 (942)
T ss_pred hhhccCCcce-----------eEEEecCCceeeeeeecCCCceEEEEeCh
Confidence 742 233 34444444444567889988888888777
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-22 Score=178.48 Aligned_cols=279 Identities=17% Similarity=0.189 Sum_probs=209.7
Q ss_pred eEEEeeccC-ceEeeecCCCceeEEEecC-----------CCCeE-EE-ecCceEEEEEeeec----cccccCCCcceEE
Q psy4571 49 AVEERVINE-EYKIWKKNTPFLYDLVVNN-----------YVANI-SC-ILNISILFFEIIFT----QNFPFPLSRQDVA 110 (437)
Q Consensus 49 ~l~tgs~d~-~v~iw~~~~~~~~~~~~~~-----------~~~~i-~~-~~~~~i~~~~~~~~----~~~~~~~~v~~~~ 110 (437)
.+.+++.|. ++.+|+.++|...-..-.. ..+++ ++ ..-..+.+|.+... +.+..+..|.|++
T Consensus 9 ~~sssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~ 88 (476)
T KOG0646|consen 9 VCSSSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALA 88 (476)
T ss_pred EEeccCCCCcceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeeee
Confidence 334556665 4899998876543222111 01122 11 23336788875433 3445688899999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC--------C
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN--------L 182 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~--------~ 182 (437)
-+| .+.+++.|+..|.|++|.+. .+..+..+.+|-..|+|+.|+.||.+ |+||+.||.|.+|++-. .
T Consensus 89 s~n-~G~~l~ag~i~g~lYlWels---sG~LL~v~~aHYQ~ITcL~fs~dgs~-iiTgskDg~V~vW~l~~lv~a~~~~~ 163 (476)
T KOG0646|consen 89 SSN-LGYFLLAGTISGNLYLWELS---SGILLNVLSAHYQSITCLKFSDDGSH-IITGSKDGAVLVWLLTDLVSADNDHS 163 (476)
T ss_pred cCC-CceEEEeecccCcEEEEEec---cccHHHHHHhhccceeEEEEeCCCcE-EEecCCCccEEEEEEEeecccccCCC
Confidence 999 68888888899999999999 67788888999999999999999995 99999999999998642 2
Q ss_pred ceeeeEeccCCCceEEEEEcCCC-CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHN-ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
..+...+..|.-+|+++...+-| +..++|+|.|.++++||+..+....+ . .-...+.+++..|.
T Consensus 164 ~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlt--------------i-~fp~si~av~lDpa 228 (476)
T KOG0646|consen 164 VKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLT--------------I-TFPSSIKAVALDPA 228 (476)
T ss_pred ccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEE--------------E-ecCCcceeEEEccc
Confidence 34577888999999999887642 12589999999999999998743322 2 23568999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCc-------------eeeeeeecccC--CceeeeecCCCCcccccCCCCcccccccc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDT-------------KTMRLDSIRSN--GGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~-------------~~~~~~~~~~~--~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
+. .+..|+.+|.|.+.++...... ..+.....+.+ .+.+++++-||.+|++|+.||.
T Consensus 229 e~-~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~------- 300 (476)
T KOG0646|consen 229 ER-VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGK------- 300 (476)
T ss_pred cc-EEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCC-------
Confidence 98 7889999999999988754411 11111122333 5667799999999999999999
Q ss_pred cccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 327 YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
+.+||+.+.++++++.-...+|+.+.+.|
T Consensus 301 ----VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 301 ----VCVWDIYSKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred ----EEEEecchHHHHHHHhhhccccceeEeec
Confidence 89999999999999986777888887644
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-21 Score=165.83 Aligned_cols=244 Identities=17% Similarity=0.290 Sum_probs=179.5
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeee---------------cCCCceeEEEe-cCCCCeE--EEecCceEEEEEeee
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWK---------------KNTPFLYDLVV-NNYVANI--SCILNISILFFEIIF 96 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~---------------~~~~~~~~~~~-~~~~~~i--~~~~~~~i~~~~~~~ 96 (437)
.-|.++.|+ +.|++++|||.|++++||+ .|.+.+..+.| .|..+.+ +|+.|+++.||+-..
T Consensus 14 DlihdVs~D-~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~ 92 (361)
T KOG2445|consen 14 DLIHDVSFD-FYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQE 92 (361)
T ss_pred ceeeeeeec-ccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecc
Confidence 557889999 9999999999999999999 34566778887 3333333 788999999997421
Q ss_pred ccc-------------cccCCCcceEEeeCCC-CCEEEEEECCCcEEEEEcCCCCC---CCCeeee-------ccCCCCe
Q psy4571 97 TQN-------------FPFPLSRQDVAWHLLH-ESLFGSVADDQKLMIWDTRSHNV---SKPSHTV-------DAHTAEV 152 (437)
Q Consensus 97 ~~~-------------~~~~~~v~~~~~sp~~-~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~-------~~h~~~v 152 (437)
... ..-+..|+++.|.|.. +-.||+++.||.+|||+.-.... ......+ ..+..+.
T Consensus 93 ~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~ 172 (361)
T KOG2445|consen 93 KSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPC 172 (361)
T ss_pred cccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcc
Confidence 111 1235689999999964 55789999999999998754311 1111122 2456678
Q ss_pred EEEEEeCC--CCcEEEEEeCC-----CeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCC---CcEEEEEeCCCeEE
Q psy4571 153 NCLSFNPY--SEYILATGSAD-----KTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHN---ETILASSGTDRRLH 219 (437)
Q Consensus 153 ~~l~~~~~--~~~~l~sgs~d-----g~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~---~~~l~sg~~dg~i~ 219 (437)
.|+.|+|. .+.+|+.|+.+ +.++||....+.. .+.++.+|+.+|++++|.|+- -++||+++.|| |+
T Consensus 173 ~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~ 251 (361)
T KOG2445|consen 173 FCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VR 251 (361)
T ss_pred eEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EE
Confidence 89999974 22258888776 5789998765442 244677899999999999973 23899999999 99
Q ss_pred EEEcCCCCCCCCCC------CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 220 VWDLSKIGEEQSTE------DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 220 vwd~~~~~~~~~~~------~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
||.+.........+ .....+.+.+..+.+|++.|..+.|+-.|. +|++.|.||+||+|...
T Consensus 252 I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGt-iLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 252 IFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGT-ILSSTGDDGCVRLWKAN 318 (361)
T ss_pred EEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeee-EEeecCCCceeeehhhh
Confidence 99998533211111 112234466777899999999999999999 89999999999999865
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=178.98 Aligned_cols=285 Identities=16% Similarity=0.136 Sum_probs=207.6
Q ss_pred ccccceeEEEEeeCCCc-ceEEEeeccCceEeeecCC-CceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 31 SHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKKNT-PFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~~~-~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+...-+|++++|++... ++++.|..-|.|-+|+..+ +...+. + .+ -.++..+|.+
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~--------v--------~~-------f~~hs~~Vs~ 239 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDG--------V--------YL-------FTPHSGPVSG 239 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCc--------e--------EE-------eccCCccccc
Confidence 44566788999994334 5888888889999999741 111111 0 00 1235578999
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
+.|+|.+...+++.+.||+|+.-|++... .+.+..+......+..+.|+.+... ++.|..=|...+||+++++.....
T Consensus 240 l~F~P~n~s~i~ssSyDGtiR~~D~~~~i-~e~v~s~~~d~~~fs~~d~~~e~~~-vl~~~~~G~f~~iD~R~~~s~~~~ 317 (498)
T KOG4328|consen 240 LKFSPANTSQIYSSSYDGTIRLQDFEGNI-SEEVLSLDTDNIWFSSLDFSAESRS-VLFGDNVGNFNVIDLRTDGSEYEN 317 (498)
T ss_pred eEecCCChhheeeeccCceeeeeeecchh-hHHHhhcCccceeeeeccccCCCcc-EEEeecccceEEEEeecCCccchh
Confidence 99999999999999999999999998542 3344444434556788889888885 667777679999999997776777
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+.-|...|++++++|..+++|||||.|++.+|||++......+ ++...-.|...|.+..|+|.+.. |+|
T Consensus 318 ~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s----------p~lst~~HrrsV~sAyFSPs~gt-l~T 386 (498)
T KOG4328|consen 318 LRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS----------PFLSTLPHRRSVNSAYFSPSGGT-LLT 386 (498)
T ss_pred hhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC----------cceecccccceeeeeEEcCCCCc-eEe
Confidence 7789999999999999999999999999999999998765442 13445588999999999999985 889
Q ss_pred EeCCCeEEEEeCC----CCCCceeeeee--ecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 269 VSEDNIMQEYCDS----TDSDTKTMRLD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 269 ~~~dg~i~iwd~~----~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.+.|..|+|||.. .-.+...+.-. .........++|.|+..++++|..-.. |-++|-..++.+
T Consensus 387 T~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~-----------IDv~~~~~~q~v 455 (498)
T KOG4328|consen 387 TCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRP-----------IDVFDGNGGQMV 455 (498)
T ss_pred eccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcc-----------eeEEcCCCCEEe
Confidence 9999999999984 33344444311 112334556799999999999976655 777887777766
Q ss_pred hhhcCCCc--cccccCCCCCCc
Q psy4571 343 RQLLGTEE--ESSDRHSSDNDT 362 (437)
Q Consensus 343 ~~~~~h~~--~~~~~~~~~~~~ 362 (437)
..+..-.. ..+...++|-+.
T Consensus 456 ~el~~P~~~tI~~vn~~HP~~~ 477 (498)
T KOG4328|consen 456 CELHDPESSTIPSVNEFHPMRD 477 (498)
T ss_pred eeccCccccccccceeeccccc
Confidence 65533322 222234666554
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-21 Score=178.86 Aligned_cols=282 Identities=8% Similarity=0.020 Sum_probs=189.5
Q ss_pred cceEEEeeccCceEeeecCCCce----------eEEEecCCCCeE--EEecCceEEEEEeeeccc---cccCCCcceEEe
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFL----------YDLVVNNYVANI--SCILNISILFFEIIFTQN---FPFPLSRQDVAW 111 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~----------~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~ 111 (437)
++++++++.|+.+++|+..++.+ ..+.+++....+ ++..++.+.+||....+. +.....+..++|
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 80 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFAL 80 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEE
Confidence 35788899999999999665432 334455555544 334678899999765433 233345678999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-eEEEEeCCCCceeeeEec
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-TVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-~i~lwd~~~~~~~~~~~~ 190 (437)
+|++..++++++.++.|++||+.+ .+.+..+.. ...+.+++|+|++.. +++++.++ .+.+||.++.+. .....
T Consensus 81 ~~~g~~l~~~~~~~~~l~~~d~~~---~~~~~~~~~-~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~d~~~~~~-~~~~~ 154 (300)
T TIGR03866 81 HPNGKILYIANEDDNLVTVIDIET---RKVLAEIPV-GVEPEGMAVSPDGKI-VVNTSETTNMAHFIDTKTYEI-VDNVL 154 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCC---CeEEeEeeC-CCCcceEEECCCCCE-EEEEecCCCeEEEEeCCCCeE-EEEEE
Confidence 995443445556789999999983 344444432 335688999999995 77777665 577789987554 33332
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
....+..++|+|+++.+++++..++.|++||+++++.......... ...........++|+|+++.++++.+
T Consensus 155 -~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~s~dg~~~~~~~~ 226 (300)
T TIGR03866 155 -VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIP-------GVHPEAVQPVGIKLTKDGKTAFVALG 226 (300)
T ss_pred -cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeeccc-------ccccccCCccceEECCCCCEEEEEcC
Confidence 2345578999999986556666799999999988654332110000 00000112356889999996566666
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.++.+.+||+++++....+. ....+..++|+|+|++|+++. .++. +++||+.+++.+..+....
T Consensus 227 ~~~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~-----------i~v~d~~~~~~~~~~~~~~ 291 (300)
T TIGR03866 227 PANRVAVVDAKTYEVLDYLL----VGQRVWQLAFTPDEKYLLTTNGVSND-----------VSVIDVAALKVIKSIKVGR 291 (300)
T ss_pred CCCeEEEEECCCCcEEEEEE----eCCCcceEEECCCCCEEEEEcCCCCe-----------EEEEECCCCcEEEEEEccc
Confidence 77889999999876654442 234566789999999988764 5676 8999999999888886554
Q ss_pred ccccccCCC
Q psy4571 350 EESSDRHSS 358 (437)
Q Consensus 350 ~~~~~~~~~ 358 (437)
. ...+.++
T Consensus 292 ~-~~~~~~~ 299 (300)
T TIGR03866 292 L-PWGVVVR 299 (300)
T ss_pred c-cceeEeC
Confidence 3 3544443
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=170.51 Aligned_cols=215 Identities=14% Similarity=0.236 Sum_probs=169.9
Q ss_pred cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC---------C---eeeeccCCCCeEEEEEeCCCCcEEEE
Q psy4571 100 FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK---------P---SHTVDAHTAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~---------~---~~~~~~h~~~v~~l~~~~~~~~~l~s 167 (437)
.+|..+|+.+...+..+.++++|+.||.|.+||++.....+ + ...-.+|.-.|.++.|-|-..-++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 35667899999999999999999999999999998543111 0 11124677889999999976668999
Q ss_pred EeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCC--CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 168 gs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++.|.++++||..+.+. ...++ .++.|++-+++|-. ..++|+|..|-.|++-|+.++... ++
T Consensus 120 sSFDhtlKVWDtnTlQ~-a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s--------------H~ 183 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQE-AVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS--------------HT 183 (397)
T ss_pred ccccceEEEeeccccee-eEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcce--------------ee
Confidence 99999999999999665 44554 57889999999853 237888888889999999998654 44
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-CCceeee-----------eeecccCCceeeeecCCCCcccc
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMR-----------LDSIRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-----------~~~~~~~~~~~~~~s~~g~~l~s 313 (437)
+.||.+.|.++.|+|...++|++|+.||.|++||++.. .+...+. ....+...+..++|+.+|.++++
T Consensus 184 LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~ 263 (397)
T KOG4283|consen 184 LSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLAS 263 (397)
T ss_pred eccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhh
Confidence 88999999999999999999999999999999999865 3333222 12223344566799999999999
Q ss_pred cCCCCcccccccccccccccccchhhhh
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.+.|.. +++|+...|+.
T Consensus 264 ~gtd~r-----------~r~wn~~~G~n 280 (397)
T KOG4283|consen 264 CGTDDR-----------IRVWNMESGRN 280 (397)
T ss_pred ccCccc-----------eEEeecccCcc
Confidence 998888 78888777654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=176.78 Aligned_cols=232 Identities=17% Similarity=0.259 Sum_probs=175.5
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe--------cCCCCeEEEecCceEEEEEeeecccc---cc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV--------NNYVANISCILNISILFFEIIFTQNF---PF 102 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~--------~~~~~~i~~~~~~~i~~~~~~~~~~~---~~ 102 (437)
.--|.-+|+. . ..++|++.|++||.|..+...+..... ......+.+.....|.|||....... ..
T Consensus 109 ~G~V~Gi~v~-~--~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw 185 (433)
T KOG0268|consen 109 EGLVRGICVT-Q--TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW 185 (433)
T ss_pred cCceeeEEec-c--cceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeec
Confidence 3357778888 3 788899999999999976543322221 11112222333446999997654432 22
Q ss_pred -CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 -PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 -~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+.++.|+|....+|++|..|+.|.+||++. ..+++.+. -+..-+.|+|+|.+- .+++|++|..+..+|++.
T Consensus 186 G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~---~~Pl~KVi-~~mRTN~IswnPeaf-nF~~a~ED~nlY~~DmR~ 260 (433)
T KOG0268|consen 186 GADSISSVKFNPVETSILASCASDRSIVLYDLRQ---ASPLKKVI-LTMRTNTICWNPEAF-NFVAANEDHNLYTYDMRN 260 (433)
T ss_pred CCCceeEEecCCCcchheeeeccCCceEEEeccc---CCccceee-eeccccceecCcccc-ceeeccccccceehhhhh
Confidence 246899999998888999999999999999994 44444332 234567899999554 699999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
...++....+|...|.+++|+|.|+. +++||.|.+|+||..+.+...... ....-..|.++.|+.|
T Consensus 261 l~~p~~v~~dhvsAV~dVdfsptG~E-fvsgsyDksIRIf~~~~~~SRdiY-------------htkRMq~V~~Vk~S~D 326 (433)
T KOG0268|consen 261 LSRPLNVHKDHVSAVMDVDFSPTGQE-FVSGSYDKSIRIFPVNHGHSRDIY-------------HTKRMQHVFCVKYSMD 326 (433)
T ss_pred hcccchhhcccceeEEEeccCCCcch-hccccccceEEEeecCCCcchhhh-------------hHhhhheeeEEEEecc
Confidence 99989999999999999999999996 999999999999999876432220 1112356999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCcee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKT 288 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~ 288 (437)
.+ ++++||.|+.|++|.....+.+..
T Consensus 327 sk-yi~SGSdd~nvRlWka~Aseklgv 352 (433)
T KOG0268|consen 327 SK-YIISGSDDGNVRLWKAKASEKLGV 352 (433)
T ss_pred cc-EEEecCCCcceeeeecchhhhcCC
Confidence 99 788999999999998876654433
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-22 Score=174.96 Aligned_cols=229 Identities=19% Similarity=0.276 Sum_probs=182.5
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
+=+.-.|..+-|+ |+.+.++++|.|..|++|. .|.+.+..+...+.++++ +++.|+.....|...+.
T Consensus 258 ~Gh~kki~~v~~~-~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~ 336 (506)
T KOG0289|consen 258 KGHTKKITSVKFH-KDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS 336 (506)
T ss_pred cCcceEEEEEEec-cchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCc
Confidence 3345567888899 9999999999999999999 345667777777888776 77778888888877665
Q ss_pred cccc------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 99 NFPF------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 99 ~~~~------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
.+.. ...+++.+|+| ++.+|.+|..||.|+|||+. .+..+..|.+|+++|..++|+.+|-+ |++++.|+
T Consensus 337 ~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlk---s~~~~a~Fpght~~vk~i~FsENGY~-Lat~add~ 411 (506)
T KOG0289|consen 337 QLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLK---SQTNVAKFPGHTGPVKAISFSENGYW-LATAADDG 411 (506)
T ss_pred EEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcC---CccccccCCCCCCceeEEEeccCceE-EEEEecCC
Confidence 5432 23488999999 79999999999999999999 45578899999999999999999886 99999999
Q ss_pred eEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 173 TVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
.|++||+|..+. ..++. ....+|.++.|.+.|.+ |+.++.|=+|++++-.+. .+..+..+..|.+
T Consensus 412 ~V~lwDLRKl~n-~kt~~l~~~~~v~s~~fD~SGt~-L~~~g~~l~Vy~~~k~~k------------~W~~~~~~~~~sg 477 (506)
T KOG0289|consen 412 SVKLWDLRKLKN-FKTIQLDEKKEVNSLSFDQSGTY-LGIAGSDLQVYICKKKTK------------SWTEIKELADHSG 477 (506)
T ss_pred eEEEEEehhhcc-cceeeccccccceeEEEcCCCCe-EEeecceeEEEEEecccc------------cceeeehhhhccc
Confidence 999999998664 44443 23347999999999996 777776656666553332 2334455677888
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
..+++.|....+ +++++|.|..++++.+
T Consensus 478 ~st~v~Fg~~aq-~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 478 LSTGVRFGEHAQ-YLASTSMDAILRLYAL 505 (506)
T ss_pred ccceeeecccce-EEeeccchhheEEeec
Confidence 899999998888 8899999999888754
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=167.61 Aligned_cols=237 Identities=16% Similarity=0.214 Sum_probs=189.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA--DKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~ 179 (437)
....++++.|++ ++..+++++.|.++++||.. .+++.+++..++-.+..++|-..... ++.++. |.+|+.-++
T Consensus 13 ~~~~i~sl~fs~-~G~~litss~dDsl~LYd~~---~g~~~~ti~skkyG~~~~~Fth~~~~-~i~sStk~d~tIryLsl 87 (311)
T KOG1446|consen 13 TNGKINSLDFSD-DGLLLITSSEDDSLRLYDSL---SGKQVKTINSKKYGVDLACFTHHSNT-VIHSSTKEDDTIRYLSL 87 (311)
T ss_pred CCCceeEEEecC-CCCEEEEecCCCeEEEEEcC---CCceeeEeecccccccEEEEecCCce-EEEccCCCCCceEEEEe
Confidence 356899999999 68888889999999999999 56777787777778889999766664 555555 899999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.+++. ++.+.+|...|++++.+|-+. .+++++.|++|++||++..++.-. +.. ..-...+|.
T Consensus 88 ~dNky-lRYF~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~~~cqg~--------------l~~--~~~pi~AfD 149 (311)
T KOG1446|consen 88 HDNKY-LRYFPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRVKKCQGL--------------LNL--SGRPIAAFD 149 (311)
T ss_pred ecCce-EEEcCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecCCCCceE--------------Eec--CCCcceeEC
Confidence 99665 999999999999999999997 589999999999999997544322 211 122447899
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCC--CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTD--SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
|+|- ++|++...+.|++||++.. .+-..+............+.|||||+++...+..+. +++.|.-
T Consensus 150 p~GL-ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~-----------~~~lDAf 217 (311)
T KOG1446|consen 150 PEGL-IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASF-----------IYLLDAF 217 (311)
T ss_pred CCCc-EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCc-----------EEEEEcc
Confidence 9998 7878877779999999865 344555554334555677899999999999988887 8999999
Q ss_pred hhhhhhhhcCCCccc---cccCCCCCCcccccc-------ccccCH
Q psy4571 338 VCEEQRQLLGTEEES---SDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~---~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+|..+.++.++...- ....++|+++.++++ +|+...
T Consensus 218 ~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~t 263 (311)
T KOG1446|consen 218 DGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLET 263 (311)
T ss_pred CCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCC
Confidence 999999998876544 466799999998876 898843
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.8e-22 Score=175.71 Aligned_cols=242 Identities=15% Similarity=0.126 Sum_probs=184.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
.-.+.++|.+ +++++|+||+.|..+.||+..+...... +. .+...|.+++|-.
T Consensus 202 ~keil~~avS-~Dgkylatgg~d~~v~Iw~~~t~ehv~~-~~-------------------------ghr~~V~~L~fr~ 254 (479)
T KOG0299|consen 202 VKEILTLAVS-SDGKYLATGGRDRHVQIWDCDTLEHVKV-FK-------------------------GHRGAVSSLAFRK 254 (479)
T ss_pred cceeEEEEEc-CCCcEEEecCCCceEEEecCcccchhhc-cc-------------------------ccccceeeeeeec
Confidence 4458889999 9999999999999999999876554332 11 2345777888887
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
+...+.+++.|..|++|+++ ....+.++.+|...|..|....-++ .+.+|+.|+++++|++.... ...+.+|.
T Consensus 255 -gt~~lys~s~Drsvkvw~~~---~~s~vetlyGHqd~v~~IdaL~reR-~vtVGgrDrT~rlwKi~ees--qlifrg~~ 327 (479)
T KOG0299|consen 255 -GTSELYSASADRSVKVWSID---QLSYVETLYGHQDGVLGIDALSRER-CVTVGGRDRTVRLWKIPEES--QLIFRGGE 327 (479)
T ss_pred -CccceeeeecCCceEEEehh---HhHHHHHHhCCccceeeechhcccc-eEEeccccceeEEEeccccc--eeeeeCCC
Confidence 67778899999999999999 6777888999999999999887777 47777799999999996422 55778899
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
+.+.|++|-.+.. +++|+.||.|.+|++...+.......++...+.+ ..-.++.+|++++..|... ++++|+.+|
T Consensus 328 ~sidcv~~In~~H--fvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~--~~~~~~~Witsla~i~~sd-L~asGS~~G 402 (479)
T KOG0299|consen 328 GSIDCVAFINDEH--FVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPEL--DPVNGNFWITSLAVIPGSD-LLASGSWSG 402 (479)
T ss_pred CCeeeEEEecccc--eeeccCCceEEEeeecccCceeEeeccccccCCc--cccccccceeeeEecccCc-eEEecCCCC
Confidence 9999999987764 7899999999999999877665543332222111 1112345899999999888 999999999
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
.|++|-++.+-..-.+...-...+-+..++|+++|+.+++|
T Consensus 403 ~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 403 CVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred ceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEe
Confidence 99999998873221221111123445566899999966655
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=166.92 Aligned_cols=238 Identities=15% Similarity=0.220 Sum_probs=174.5
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
.-.+.+++.+ +..+++||.|.+|+|||.....-.+... .+...|+++.|.+
T Consensus 43 ~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~ll--------------------------~HagsitaL~F~~ 93 (362)
T KOG0294|consen 43 AGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGILL--------------------------SHAGSITALKFYP 93 (362)
T ss_pred ccceeEEEec---ceeEeccCCCCcEEEEeccchhhhccee--------------------------ccccceEEEEecC
Confidence 3445666666 5588888888888888865544333322 2345778999987
Q ss_pred CC-CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 114 LH-ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 114 ~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
.- ...|++|+.||.|.+|+.. ....+..+++|.+.|+.++.+|.++ +.++.+.|+.+++||+-.++... .++ -
T Consensus 94 ~~S~shLlS~sdDG~i~iw~~~---~W~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a~-v~~-L 167 (362)
T KOG0294|consen 94 PLSKSHLLSGSDDGHIIIWRVG---SWELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVAF-VLN-L 167 (362)
T ss_pred CcchhheeeecCCCcEEEEEcC---CeEEeeeecccccccceeEecCCCc-eEEEEcCCceeeeehhhcCccce-eec-c
Confidence 31 2378899999999999999 6788999999999999999999999 68899999999999998877522 222 2
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
....+.+.|+|.|.+ ++.++. ..|-+|.+.+....... .....+.++.|-..+ .+++|+.|
T Consensus 168 ~~~at~v~w~~~Gd~-F~v~~~-~~i~i~q~d~A~v~~~i---------------~~~~r~l~~~~l~~~--~L~vG~d~ 228 (362)
T KOG0294|consen 168 KNKATLVSWSPQGDH-FVVSGR-NKIDIYQLDNASVFREI---------------ENPKRILCATFLDGS--ELLVGGDN 228 (362)
T ss_pred CCcceeeEEcCCCCE-EEEEec-cEEEEEecccHhHhhhh---------------hccccceeeeecCCc--eEEEecCC
Confidence 233455999999996 555554 46889999876543321 112346666665443 57799999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeee--ecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISST--ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+.|++||.....+...+.. |...+..+. -.|++.+|++++.||. |++||+.+.
T Consensus 229 ~~i~~~D~ds~~~~~~~~A---H~~RVK~i~~~~~~~~~~lvTaSSDG~-----------I~vWd~~~~ 283 (362)
T KOG0294|consen 229 EWISLKDTDSDTPLTEFLA---HENRVKDIASYTNPEHEYLVTASSDGF-----------IKVWDIDME 283 (362)
T ss_pred ceEEEeccCCCccceeeec---chhheeeeEEEecCCceEEEEeccCce-----------EEEEEcccc
Confidence 9999999998777766665 344444443 3688999999999999 777777665
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-21 Score=171.51 Aligned_cols=306 Identities=14% Similarity=0.167 Sum_probs=220.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccC--------ceEeeecC-----------CCceeEEEecCC--CCeEEEe---cCceE
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINE--------EYKIWKKN-----------TPFLYDLVVNNY--VANISCI---LNISI 89 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~--------~v~iw~~~-----------~~~~~~~~~~~~--~~~i~~~---~~~~i 89 (437)
...|-|++.+ |+.-++++|-.-+ .+|+|+.. ...+-.++|++. +..+.+. .+..+
T Consensus 104 ~ddikc~~vH-Pdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~l 182 (626)
T KOG2106|consen 104 NDDIKCMAVH-PDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHML 182 (626)
T ss_pred CCceEEEeec-CCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCcccc
Confidence 5568889999 9888999876666 48999922 222334444332 2233333 33458
Q ss_pred EEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcE
Q psy4571 90 LFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYI 164 (437)
Q Consensus 90 ~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~ 164 (437)
.+||++..... ..+..|....|+|.+.+++++.+ .|.+..|+++.+...+....+..++ ..|.|++|.++|.
T Consensus 183 SVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-- 259 (626)
T KOG2106|consen 183 SVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-- 259 (626)
T ss_pred chhhchhhhccCcceeccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC--
Confidence 88998765543 34567889999999888888776 5789999998654333334444333 4699999999998
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC-CCCCC---
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGPP--- 240 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-~~~~~--- 240 (437)
+++|..+|.|.||+..+.+. .+....|.+.|.+++...+|. |++|+.|..|..|| ...+..+..+.. ..++.
T Consensus 260 viTgDS~G~i~Iw~~~~~~~-~k~~~aH~ggv~~L~~lr~Gt--llSGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv 335 (626)
T KOG2106|consen 260 VITGDSGGNILIWSKGTNRI-SKQVHAHDGGVFSLCMLRDGT--LLSGGKDRKIILWD-DNYRKLRETELPEQFGPIRTV 335 (626)
T ss_pred EEeecCCceEEEEeCCCceE-EeEeeecCCceEEEEEecCcc--EeecCccceEEecc-ccccccccccCchhcCCeeEE
Confidence 89999999999999988665 444449999999999999996 66799999999999 333322222110 01111
Q ss_pred -----------------------ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 241 -----------------------ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 241 -----------------------~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
..-....+|......++.+|+.+ +++|++.|+.+++|+ ..+.+.+.. ...
T Consensus 336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~-q~~T~gqdk~v~lW~--~~k~~wt~~----~~d 408 (626)
T KOG2106|consen 336 AEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKN-QLLTCGQDKHVRLWN--DHKLEWTKI----IED 408 (626)
T ss_pred ecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChh-heeeccCcceEEEcc--CCceeEEEE----ecC
Confidence 11122346888899999999998 888999999999999 333443333 346
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
...++.|+|.| .++.|+..|. +-+.|.++...+..-.. .++.+.+.++|+|..++..
T Consensus 409 ~~~~~~fhpsg-~va~Gt~~G~-----------w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvg 465 (626)
T KOG2106|consen 409 PAECADFHPSG-VVAVGTATGR-----------WFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVG 465 (626)
T ss_pred ceeEeeccCcc-eEEEeeccce-----------EEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEe
Confidence 67788999999 9999999888 88899988554443344 7789999999999988875
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=179.04 Aligned_cols=268 Identities=13% Similarity=0.129 Sum_probs=205.8
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCC--ceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP--FLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~--~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
...+++.++|+..+--.+++-+.|+.+++|.+.+. .+.-+.... + ..-.|++
T Consensus 33 ~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~--------------------g------d~~~Cv~ 86 (673)
T KOG4378|consen 33 AEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLT--------------------G------DNAFCVA 86 (673)
T ss_pred CCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccc--------------------c------chHHHHh
Confidence 45678889998544444455567778889987653 121111000 0 0112333
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
... ...++++|+..+.|+|||++ .....+.+++|+..|+++.++-...| ||+++..|.|.|..+.++.. ...+.
T Consensus 87 ~~s-~S~y~~sgG~~~~Vkiwdl~---~kl~hr~lkdh~stvt~v~YN~~Dey-iAsvs~gGdiiih~~~t~~~-tt~f~ 160 (673)
T KOG4378|consen 87 CAS-QSLYEISGGQSGCVKIWDLR---AKLIHRFLKDHQSTVTYVDYNNTDEY-IASVSDGGDIIIHGTKTKQK-TTTFT 160 (673)
T ss_pred hhh-cceeeeccCcCceeeehhhH---HHHHhhhccCCcceeEEEEecCCcce-eEEeccCCcEEEEecccCcc-cccee
Confidence 333 23688999999999999998 45667788999999999999999997 99999999999999998554 55554
Q ss_pred cC-CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 191 SH-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 191 ~h-~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
.. ...|.-+.|+|..+.+|.+++.+|.|.+||+........ -.+.|..+...|+|+|....+|++.
T Consensus 161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~-------------~~~~HsAP~~gicfspsne~l~vsV 227 (673)
T KOG4378|consen 161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFH-------------ASEAHSAPCRGICFSPSNEALLVSV 227 (673)
T ss_pred cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccc-------------hhhhccCCcCcceecCCccceEEEe
Confidence 33 344668999999999999999999999999988654433 2568999999999999998899999
Q ss_pred eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh-hhhhhhcCC
Q psy4571 270 SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC-EEQRQLLGT 348 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~h 348 (437)
+.|..|.+||....+....+.. ......++|+++|.+|+.|...|. +..||++.- ..+..+..|
T Consensus 228 G~Dkki~~yD~~s~~s~~~l~y----~~Plstvaf~~~G~~L~aG~s~G~-----------~i~YD~R~~k~Pv~v~sah 292 (673)
T KOG4378|consen 228 GYDKKINIYDIRSQASTDRLTY----SHPLSTVAFSECGTYLCAGNSKGE-----------LIAYDMRSTKAPVAVRSAH 292 (673)
T ss_pred cccceEEEeecccccccceeee----cCCcceeeecCCceEEEeecCCce-----------EEEEecccCCCCceEeeec
Confidence 9999999999998777666653 455667899999999999999998 677777654 466777889
Q ss_pred CccccccCCCCC
Q psy4571 349 EEESSDRHSSDN 360 (437)
Q Consensus 349 ~~~~~~~~~~~~ 360 (437)
...|.+++|.+.
T Consensus 293 ~~sVt~vafq~s 304 (673)
T KOG4378|consen 293 DASVTRVAFQPS 304 (673)
T ss_pred ccceeEEEeeec
Confidence 888888876654
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-20 Score=177.23 Aligned_cols=305 Identities=13% Similarity=0.175 Sum_probs=229.7
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe-----------cCCCCeE-EEecCceEEEEEeeeccc---cc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV-----------NNYVANI-SCILNISILFFEIIFTQN---FP 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~-----------~~~~~~i-~~~~~~~i~~~~~~~~~~---~~ 101 (437)
+.+++....+-+.++.|+.+|.+++|+..++++..... .|...-+ ....+|+|.+++++.++. +.
T Consensus 162 Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk 241 (910)
T KOG1539|consen 162 ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFK 241 (910)
T ss_pred eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEE
Confidence 77888776778899999999999999988777554432 2222333 234789999999987764 34
Q ss_pred cC-CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 102 FP-LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~-~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
+. ..|+.++|.-++..++++|+..|.+.+||++.. +..... ..|.+.|..+.|.|..+ ++++++.|..+++|=.
T Consensus 242 ~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~k---kl~~v~~nah~~sv~~~~fl~~ep-Vl~ta~~DnSlk~~vf 317 (910)
T KOG1539|consen 242 QDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKK---KLINVTRNAHYGSVTGATFLPGEP-VLVTAGADNSLKVWVF 317 (910)
T ss_pred ccccceeEEEeccCCCeeEEeccCCceEEEEEcCCC---eeeeeeeccccCCcccceecCCCc-eEeeccCCCceeEEEe
Confidence 54 789999999988889999999999999999843 333222 36777777777777665 6777777777777633
Q ss_pred CCCc-----------------------------------------------------e---------------------e
Q psy4571 180 RNLK-----------------------------------------------------L---------------------K 185 (437)
Q Consensus 180 ~~~~-----------------------------------------------------~---------------------~ 185 (437)
+++. . +
T Consensus 318 D~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~ 397 (910)
T KOG1539|consen 318 DSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPP 397 (910)
T ss_pred eCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCc
Confidence 3110 0 0
Q ss_pred --------------------------e------------eEec-----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 186 --------------------------L------------HSFE-----SHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 186 --------------------------~------------~~~~-----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
. ..+. .....+++++.++.|+ +.+.|...|.|-+|+
T Consensus 398 i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGN-F~~IG~S~G~Id~fN 476 (910)
T KOG1539|consen 398 IVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGN-FVFIGYSKGTIDRFN 476 (910)
T ss_pred ceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCc-eEEEeccCCeEEEEE
Confidence 0 0000 0124568899999998 578899999999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
+.++-...+. ..-..|..+|++++....++ ++++++.+|.+++||......+..+.. ..+...+
T Consensus 477 mQSGi~r~sf-----------~~~~ah~~~V~gla~D~~n~-~~vsa~~~Gilkfw~f~~k~l~~~l~l----~~~~~~i 540 (910)
T KOG1539|consen 477 MQSGIHRKSF-----------GDSPAHKGEVTGLAVDGTNR-LLVSAGADGILKFWDFKKKVLKKSLRL----GSSITGI 540 (910)
T ss_pred cccCeeeccc-----------ccCccccCceeEEEecCCCc-eEEEccCcceEEEEecCCcceeeeecc----CCCccee
Confidence 9987544331 11257999999999988888 899999999999999999876666654 2344455
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
..+.....++.+..|-. |++.|..|.+.++.+.||.+.+++..|||||+.+++. +|++..
T Consensus 541 v~hr~s~l~a~~~ddf~-----------I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt 607 (910)
T KOG1539|consen 541 VYHRVSDLLAIALDDFS-----------IRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT 607 (910)
T ss_pred eeeehhhhhhhhcCcee-----------EEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence 66777778888888777 8999999999999999999999999999999988775 888833
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-20 Score=173.44 Aligned_cols=277 Identities=16% Similarity=0.154 Sum_probs=207.9
Q ss_pred eeEEecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeEEEecCce
Q psy4571 22 FFTWSALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANISCILNIS 88 (437)
Q Consensus 22 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i~~~~~~~ 88 (437)
..+++=.-+.+.|-.|.+++|+ ...+.+|.+-.|+.|.+|+.. ...+..++|.+.++..+...+|+
T Consensus 13 m~vhrcrf~d~~Ps~I~slA~s-~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~ 91 (691)
T KOG2048|consen 13 MQVHRCRFVDYKPSEIVSLAYS-HKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGS 91 (691)
T ss_pred eEEEEEEEEeeeccceEEEEEe-ccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCce
Confidence 3333334467888999999999 677789999999999999954 34466777887888889999999
Q ss_pred EEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 89 ILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 89 i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
|.-||+...... .....+.+++.+| .+..++.|+.||.+..++...+ .......+...+++|.+++|+|++.+
T Consensus 92 i~EwDl~~lk~~~~~d~~gg~IWsiai~p-~~~~l~IgcddGvl~~~s~~p~-~I~~~r~l~rq~sRvLslsw~~~~~~- 168 (691)
T KOG2048|consen 92 ITEWDLHTLKQKYNIDSNGGAIWSIAINP-ENTILAIGCDDGVLYDFSIGPD-KITYKRSLMRQKSRVLSLSWNPTGTK- 168 (691)
T ss_pred EEEEecccCceeEEecCCCcceeEEEeCC-ccceEEeecCCceEEEEecCCc-eEEEEeecccccceEEEEEecCCccE-
Confidence 999998766543 2456899999999 6789999999997777776632 12233445555789999999999996
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEe----cc----CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSF----ES----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~----~~----h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
+++|+.||.|++||..++.. +... .+ -..-|.++.|-.++. +++|...|+|.+||...+...+.
T Consensus 169 i~~Gs~Dg~Iriwd~~~~~t-~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t--I~sgDS~G~V~FWd~~~gTLiqS----- 240 (691)
T KOG2048|consen 169 IAGGSIDGVIRIWDVKSGQT-LHIITMQLDRLSKREPTIVWSVLFLRDST--IASGDSAGTVTFWDSIFGTLIQS----- 240 (691)
T ss_pred EEecccCceEEEEEcCCCce-EEEeeecccccccCCceEEEEEEEeecCc--EEEecCCceEEEEcccCcchhhh-----
Confidence 99999999999999998765 3211 11 223477888887773 89999999999999999866555
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCceeeeecCCCCcccccC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+..|...|.+++..+++. .+++++.|+.|..+...+.+...... ....|.+.+.+++..++ .+.+|+
T Consensus 241 ---------~~~h~adVl~Lav~~~~d-~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG 308 (691)
T KOG2048|consen 241 ---------HSCHDADVLALAVADNED-RVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGG 308 (691)
T ss_pred ---------hhhhhcceeEEEEcCCCC-eEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecc
Confidence 778999999999999988 67799999999999988775422111 22234445555555554 666666
Q ss_pred CCCcccc
Q psy4571 316 PTPTNSV 322 (437)
Q Consensus 316 ~d~~~~~ 322 (437)
.|.++.+
T Consensus 309 ~d~~l~i 315 (691)
T KOG2048|consen 309 RDFTLAI 315 (691)
T ss_pred eeeEEEE
Confidence 6655443
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=177.06 Aligned_cols=266 Identities=14% Similarity=0.157 Sum_probs=203.9
Q ss_pred cCCCceeEEEecCCCCeEEEecCceEEEEEeeec-ccccc--------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 64 KNTPFLYDLVVNNYVANISCILNISILFFEIIFT-QNFPF--------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~-~~~~~--------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
.|++.+..+..+.....+..++.|.|++||+... .+.+. ...++++...| +++.|++|+.-.++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~p-dgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLP-DGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecC-CCceEEeccccceeeeeecc
Confidence 3567777778888889999999999999997643 22221 23678999999 68888899999999999998
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
... .+....+....-...+++.+||.+ +.+++..||.|.|||+.+ +..++.+.+|.+.+.||..+++|.. |-||+.
T Consensus 496 apT-prikaeltssapaCyALa~spDak-vcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtk-lWTGGl 571 (705)
T KOG0639|consen 496 APT-PRIKAELTSSAPACYALAISPDAK-VCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTK-LWTGGL 571 (705)
T ss_pred CCC-cchhhhcCCcchhhhhhhcCCccc-eeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCce-eecCCC
Confidence 542 232233333334577899999998 689999999999999998 4459999999999999999999985 899999
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
|.+||.||++.+...+. ..-.+.|.++.++|.+. .++.|-.++.+-+-.....+. ..+..
T Consensus 572 DntvRcWDlregrqlqq---------------hdF~SQIfSLg~cP~~d-WlavGMens~vevlh~skp~k-yqlhl--- 631 (705)
T KOG0639|consen 572 DNTVRCWDLREGRQLQQ---------------HDFSSQIFSLGYCPTGD-WLAVGMENSNVEVLHTSKPEK-YQLHL--- 631 (705)
T ss_pred ccceeehhhhhhhhhhh---------------hhhhhhheecccCCCcc-ceeeecccCcEEEEecCCccc-eeecc---
Confidence 99999999999765443 22356799999999999 566888888887777654322 22222
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+...+.++.|++.|+++++.+.|.. +..|....|..+...+... .|.+...+.|++.+.+
T Consensus 632 heScVLSlKFa~cGkwfvStGkDnl-----------LnawrtPyGasiFqskE~S-sVlsCDIS~ddkyIVT 691 (705)
T KOG0639|consen 632 HESCVLSLKFAYCGKWFVSTGKDNL-----------LNAWRTPYGASIFQSKESS-SVLSCDISFDDKYIVT 691 (705)
T ss_pred cccEEEEEEecccCceeeecCchhh-----------hhhccCccccceeeccccC-cceeeeeccCceEEEe
Confidence 5566788899999999999999988 6777777777666665554 4666666666664443
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=182.84 Aligned_cols=252 Identities=17% Similarity=0.164 Sum_probs=191.4
Q ss_pred EEEecCCCCeEEEecCceEEEEEeeeccccc------cCCCcce-EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee
Q psy4571 71 DLVVNNYVANISCILNISILFFEIIFTQNFP------FPLSRQD-VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH 143 (437)
Q Consensus 71 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~------~~~~v~~-~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 143 (437)
.+......-.++.+.|+++++|+-...+-.. ...-+.+ +++-+.++..+++|+.|++|.+|.+. ...++.
T Consensus 19 ~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~---~~~P~~ 95 (745)
T KOG0301|consen 19 AVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS---QAEPLY 95 (745)
T ss_pred eeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecC---CCCchh
Confidence 3333333334567779999999965444333 1122333 67766456678899999999999998 678899
Q ss_pred eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc
Q psy4571 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 144 ~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
.+++|+..|.|++...++. ++|||.|.++++|-... . ...+.+|+..|.+++.-|.+. ++|||.|.+|++|.-
T Consensus 96 ~LkgH~snVC~ls~~~~~~--~iSgSWD~TakvW~~~~--l-~~~l~gH~asVWAv~~l~e~~--~vTgsaDKtIklWk~ 168 (745)
T KOG0301|consen 96 TLKGHKSNVCSLSIGEDGT--LISGSWDSTAKVWRIGE--L-VYSLQGHTASVWAVASLPENT--YVTGSADKTIKLWKG 168 (745)
T ss_pred hhhccccceeeeecCCcCc--eEecccccceEEecchh--h-hcccCCcchheeeeeecCCCc--EEeccCcceeeeccC
Confidence 9999999999999888775 89999999999998764 2 456899999999999999883 789999999999976
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
.+ .+.++.+|++-|+++++-|++. +++++.||.|+.|++ +++++..+.. |..-..+++
T Consensus 169 ~~----------------~l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~-~ge~l~~~~g---htn~vYsis 226 (745)
T KOG0301|consen 169 GT----------------LLKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDL-DGEVLLEMHG---HTNFVYSIS 226 (745)
T ss_pred Cc----------------hhhhhccchhheeeeEEecCCC--eEeecCCceEEEEec-cCceeeeeec---cceEEEEEE
Confidence 33 3456899999999999999987 669999999999999 5667666654 445556667
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
..+++..+++++.|++ +++|+.. ++.+.+.--...+.++.+-++|+.+..+
T Consensus 227 ~~~~~~~Ivs~gEDrt-----------lriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~ 277 (745)
T KOG0301|consen 227 MALSDGLIVSTGEDRT-----------LRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGG 277 (745)
T ss_pred ecCCCCeEEEecCCce-----------EEEeecC--ceEEEEecCccceEEEEEeeCCCEEEec
Confidence 7889999999999999 6777765 3333333223346666666666654443
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=168.62 Aligned_cols=271 Identities=10% Similarity=0.092 Sum_probs=205.6
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-------------CceeEEEecCCCCeEEEe--cCceEEEEEee
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-------------PFLYDLVVNNYVANISCI--LNISILFFEII 95 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-------------~~~~~~~~~~~~~~i~~~--~~~~i~~~~~~ 95 (437)
.++.-+|.++.|+ |.-.++++++.|++++|+...+ -.+....+.+.+....+. ...-...||+.
T Consensus 210 ~ps~~~I~sv~FH-p~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 210 HPSHGGITSVQFH-PTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred CcCcCCceEEEec-CCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc
Confidence 4567789999999 9999999999999999999543 223344455555533333 33457888987
Q ss_pred ecccccc-------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEE
Q psy4571 96 FTQNFPF-------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168 (437)
Q Consensus 96 ~~~~~~~-------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sg 168 (437)
..+..++ ...+.....+| ++++++..+..|.|.+.... +.+.+..++ -.+.|..++|+.+++. |+++
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhak---T~eli~s~K-ieG~v~~~~fsSdsk~-l~~~ 362 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAK---TKELITSFK-IEGVVSDFTFSSDSKE-LLAS 362 (514)
T ss_pred ccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhh---hhhhhheee-eccEEeeEEEecCCcE-EEEE
Confidence 6554332 23567888899 67899999999999999888 445555554 3678999999999985 7777
Q ss_pred eCCCeEEEEeCCCCceeeeEeccCCCc--eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 169 SADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 169 s~dg~i~lwd~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.+|.|.+||++.... +..+.. .+. -++++.++++. +||+|+..|.|.|||..+.... ..++++..+
T Consensus 363 ~~~GeV~v~nl~~~~~-~~rf~D-~G~v~gts~~~S~ng~-ylA~GS~~GiVNIYd~~s~~~s--------~~PkPik~~ 431 (514)
T KOG2055|consen 363 GGTGEVYVWNLRQNSC-LHRFVD-DGSVHGTSLCISLNGS-YLATGSDSGIVNIYDGNSCFAS--------TNPKPIKTV 431 (514)
T ss_pred cCCceEEEEecCCcce-EEEEee-cCccceeeeeecCCCc-eEEeccCcceEEEeccchhhcc--------CCCCchhhh
Confidence 8899999999999644 666653 233 36677789998 5999999999999997764321 234566667
Q ss_pred cCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
..-...|++++|+|+.+ +|+.+| .+..+++-.+.+......++......+-+.+++|||.|-++|.|...+.+
T Consensus 432 dNLtt~Itsl~Fn~d~q-iLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv 506 (514)
T KOG2055|consen 432 DNLTTAITSLQFNHDAQ-ILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRV 506 (514)
T ss_pred hhhheeeeeeeeCcchh-hhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCce
Confidence 77788999999999999 776665 57889999998876666666554445567788999999999999999983
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-22 Score=162.38 Aligned_cols=242 Identities=19% Similarity=0.184 Sum_probs=178.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.-|.++...- .+..||+++.|++|+|+..+.......+..+.+|.++|..++|.. .|. +||+++.||.|.||.-.+
T Consensus 12 D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~-iLAScsYDgkVIiWke~~ 89 (299)
T KOG1332|consen 12 DMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGT-ILASCSYDGKVIIWKEEN 89 (299)
T ss_pred hhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCc-EeeEeecCceEEEEecCC
Confidence 3444444444 578999999999999999998766678899999999999999964 566 799999999999999887
Q ss_pred Cce-eeeEeccCCCceEEEEEcCCCC-cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 182 LKL-KLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 182 ~~~-~~~~~~~h~~~v~~v~~~p~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
++. .......|...|++++|.|.+- .+|++++.||.|.|.+.+....-.. -.....|.-.|++++|.
T Consensus 90 g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t-----------~ki~~aH~~GvnsVswa 158 (299)
T KOG1332|consen 90 GRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTT-----------SKIVFAHEIGVNSVSWA 158 (299)
T ss_pred CchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccc-----------hhhhhccccccceeeec
Confidence 642 1345567999999999998642 3788999999999999987621111 12356899999999999
Q ss_pred cC---C----------CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC----CcccccCCCCcccc
Q psy4571 260 PN---E----------PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA----SSTASESPTPTNSV 322 (437)
Q Consensus 260 p~---~----------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~s~s~d~~~~~ 322 (437)
|. | ...|++|+.|+.|+||+...+.-...-. ...|..-+..++|.|.- .++|+++.|+++.+
T Consensus 159 pa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~-l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viI 237 (299)
T KOG1332|consen 159 PASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERT-LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVII 237 (299)
T ss_pred CcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhh-hhhcchhhhhhhhccccCCCceeeEEecCCCcEEE
Confidence 86 3 1358999999999999999873222211 22355667778888865 48999999999655
Q ss_pred cccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 323 HEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
|..+. ...-| ...-+....+.+..+.++..|..++.+
T Consensus 238 wt~~~--e~e~w------k~tll~~f~~~~w~vSWS~sGn~LaVs 274 (299)
T KOG1332|consen 238 WTKDE--EYEPW------KKTLLEEFPDVVWRVSWSLSGNILAVS 274 (299)
T ss_pred EEecC--ccCcc------cccccccCCcceEEEEEeccccEEEEe
Confidence 53320 00011 122334566778888888888877654
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=171.73 Aligned_cols=215 Identities=19% Similarity=0.285 Sum_probs=175.8
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
..+...|.+++++.-....|++||.|.+|++||..++.+....- .+...|.+++
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~--------------------------~~~k~Vq~l~ 293 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSIT--------------------------HHGKKVQTLE 293 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehh--------------------------hcCCceeEEE
Confidence 45667778899997778999999999999999998888765532 1346788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+|.....|++|+.|++|.+.|.+......... ...+.|-.++|.|...+.++++..||+|+-+|+|....++.+++
T Consensus 294 wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w---k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~ 370 (463)
T KOG0270|consen 294 WHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW---KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK 370 (463)
T ss_pred ecCCCceEEEeccccceEEeeeccCccccCceE---EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEE
Confidence 999999999999999999999998532222222 23568999999999998899999999999999999888899999
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
.|.++|.++++++..+.++++++.|+.|++|++.......... ..-.-+...|.++.|+-...++.|+
T Consensus 371 AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~------------~~~~~~rl~c~~~~~~~a~~la~GG 438 (463)
T KOG0270|consen 371 AHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE------------HSFKLGRLHCFALDPDVAFTLAFGG 438 (463)
T ss_pred eccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc------------ccccccceeecccCCCcceEEEecC
Confidence 9999999999999999999999999999999998765433210 0011123677888999888999999
Q ss_pred CCCeEEEEeCCCCCCc
Q psy4571 271 EDNIMQEYCDSTDSDT 286 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~ 286 (437)
..+.+++||+.+....
T Consensus 439 ~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 439 EKAVLRVWDIFTNSPV 454 (463)
T ss_pred ccceEEEeecccChhH
Confidence 9999999999887554
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=166.49 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=177.0
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
..|+.|++ .|.+||+|..||.|.|||+. +...-+.+.+|..+|++++||++|+. |+|+|.|..|.+||+..+..
T Consensus 26 a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~---T~~iar~lsaH~~pi~sl~WS~dgr~-LltsS~D~si~lwDl~~gs~- 99 (405)
T KOG1273|consen 26 AECCQFSR-WGDYLAVGCANGRVVIYDFD---TFRIARMLSAHVRPITSLCWSRDGRK-LLTSSRDWSIKLWDLLKGSP- 99 (405)
T ss_pred cceEEecc-CcceeeeeccCCcEEEEEcc---ccchhhhhhccccceeEEEecCCCCE-eeeecCCceeEEEeccCCCc-
Confidence 78999999 78999999999999999999 45566788899999999999999995 99999999999999988652
Q ss_pred eeEeccCCCceEE-----------------------------------------------EEEcCCCCcEEEEEeCCCeE
Q psy4571 186 LHSFESHKDEIFQ-----------------------------------------------VQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 186 ~~~~~~h~~~v~~-----------------------------------------------v~~~p~~~~~l~sg~~dg~i 218 (437)
+..+. ...+|.. ..|.+.|++ +++|...|.+
T Consensus 100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~y-IitGtsKGkl 177 (405)
T KOG1273|consen 100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKY-IITGTSKGKL 177 (405)
T ss_pred eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCE-EEEecCcceE
Confidence 33222 1122221 225555664 7788888888
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-------CCceeee
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-------SDTKTMR 290 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~ 290 (437)
.++|..+.+++.. ++-.. ..|..+.++..|+ .++..+.|..||.|+++.- +.....+
T Consensus 178 lv~~a~t~e~vas--------------~rits~~~IK~I~~s~~g~-~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K 242 (405)
T KOG1273|consen 178 LVYDAETLECVAS--------------FRITSVQAIKQIIVSRKGR-FLIINTSDRVIRTYEISDIDDEGRDGEVEPEHK 242 (405)
T ss_pred EEEecchheeeee--------------eeechheeeeEEEEeccCc-EEEEecCCceEEEEehhhhcccCccCCcChhHH
Confidence 8888887654433 33223 6789999999999 7889999999999998721 1111111
Q ss_pred e-eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC-ccccccCCCCCCcccc---
Q psy4571 291 L-DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE-EESSDRHSSDNDTEDL--- 365 (437)
Q Consensus 291 ~-~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~-~~~~~~~~~~~~~~~~--- 365 (437)
. ..........++||.+|.++..++...-. +++|.-..|.+++.+.|.. +....+.+.|-...++
T Consensus 243 ~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHa----------LYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~ 312 (405)
T KOG1273|consen 243 LQDVVNKLQWKKCCFSGDGEYVCAGSARAHA----------LYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIA 312 (405)
T ss_pred HHHHHhhhhhhheeecCCccEEEecccccee----------EEEEecCCcceeeeecCCchhheeecccccceeeeeecc
Confidence 1 11233445667999999999998844332 8899999999999888876 4445555555333322
Q ss_pred ---cccccc-CHHHHHHHHHhhhccccccc
Q psy4571 366 ---NSIWSM-TDEQREYYKTQFHNLQRHKS 391 (437)
Q Consensus 366 ---~~~w~~-~~~~~~~~~~~f~~~~~~~~ 391 (437)
..+|.. ..+....+...|+.+....+
T Consensus 313 sg~v~iw~~~~~enwsafAPdFqeleeNie 342 (405)
T KOG1273|consen 313 SGVVYIWAVVQVENWSAFAPDFQELEENIE 342 (405)
T ss_pred CCceEEEEeecccchhhcCchHHHHHhhhh
Confidence 236665 44444445555554444333
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=192.65 Aligned_cols=235 Identities=23% Similarity=0.379 Sum_probs=197.6
Q ss_pred cccceeEEEEeeCCCcce----EEEeeccCceEeee-----------------cCCCceeEEEecCCCCeE--EEecCce
Q psy4571 32 HSIYRFYRLCVAEPFDDA----VEERVINEEYKIWK-----------------KNTPFLYDLVVNNYVANI--SCILNIS 88 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~----l~tgs~d~~v~iw~-----------------~~~~~~~~~~~~~~~~~i--~~~~~~~ 88 (437)
-..++.+.++|. +.++. |+.|..||.|-+|+ .|+|.+..+.|++....+ ++..+|.
T Consensus 62 ~s~~rF~kL~W~-~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~ge 140 (1049)
T KOG0307|consen 62 QSSNRFNKLAWG-SYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGE 140 (1049)
T ss_pred cccccceeeeec-ccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCc
Confidence 346778889998 66665 99999999999999 467889999999888855 5567889
Q ss_pred EEEEEeeeccc------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC--CeEEEEEeCC
Q psy4571 89 ILFFEIIFTQN------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA--EVNCLSFNPY 160 (437)
Q Consensus 89 i~~~~~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~--~v~~l~~~~~ 160 (437)
|.|||+...+. ...+..|.+++|+.....+|++++.+|.+.|||++ ..+++..+..|.+ .+..++|+|+
T Consensus 141 I~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr---~~~pii~ls~~~~~~~~S~l~WhP~ 217 (1049)
T KOG0307|consen 141 ILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR---KKKPIIKLSDTPGRMHCSVLAWHPD 217 (1049)
T ss_pred EEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc---CCCcccccccCCCccceeeeeeCCC
Confidence 99999875432 22456899999999888999999999999999999 4455656655544 4789999999
Q ss_pred CCcEEEEEeCCCe---EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKT---VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 161 ~~~~l~sgs~dg~---i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+...+++++.|.. |.+||+|....+++++++|..+|.++.|++.+..++++++.|++|.+|+..+++.
T Consensus 218 ~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv--------- 288 (1049)
T KOG0307|consen 218 HATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV--------- 288 (1049)
T ss_pred CceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE---------
Confidence 8887888887654 9999999888888999999999999999999977899999999999999999754
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+..+....+++..+.|+|..+.+++.++.||.|.|+.+.+..
T Consensus 289 -----l~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 289 -----LGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred -----eeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 344566678999999999999899999999999999998764
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-20 Score=154.62 Aligned_cols=213 Identities=21% Similarity=0.347 Sum_probs=170.7
Q ss_pred CceeEEEecCCCCeEEEecCceEEEEEeeecccc----c------cCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCC
Q psy4571 67 PFLYDLVVNNYVANISCILNISILFFEIIFTQNF----P------FPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRS 135 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~------~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~ 135 (437)
+.+..+.|.|....+.+..+..|.+|++.....+ + .....++-+|+|. +++.++ ...|+++..||+++
T Consensus 124 g~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~-tt~d~tl~~~D~RT 202 (370)
T KOG1007|consen 124 GKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVA-TTSDSTLQFWDLRT 202 (370)
T ss_pred CceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEE-EeCCCcEEEEEccc
Confidence 5677888999888999999999999997644331 1 2335667889994 455665 45689999999995
Q ss_pred CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC
Q psy4571 136 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215 (437)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d 215 (437)
.. +....-.+|...|..+.|+|+-+++|++|+.||.|++||.+..+.++..+.+|...|.++.|+|....++.+|+.|
T Consensus 203 ~~--~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD 280 (370)
T KOG1007|consen 203 MK--KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSD 280 (370)
T ss_pred hh--hhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCC
Confidence 32 3333445788899999999999999999999999999999999999999999999999999999888899999999
Q ss_pred CeEEEEEcCCCCCCCCCCC---------------CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 216 RRLHVWDLSKIGEEQSTED---------------AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~---------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
..|.+|....-.....+.. ....+...+.++..|.+.|.+++|+...++++|+-+.||.+.|=.+
T Consensus 281 s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 281 SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred ceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 9999998876553332221 1112234456788999999999999999999999999999988665
Q ss_pred CC
Q psy4571 281 ST 282 (437)
Q Consensus 281 ~~ 282 (437)
..
T Consensus 361 ~r 362 (370)
T KOG1007|consen 361 PR 362 (370)
T ss_pred Ch
Confidence 43
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=166.65 Aligned_cols=218 Identities=17% Similarity=0.185 Sum_probs=163.5
Q ss_pred CceeEEEecCCCCeEEEe-cCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC------
Q psy4571 67 PFLYDLVVNNYVANISCI-LNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS------ 135 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~-~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~------ 135 (437)
|.+..+..++.+.++.++ ..+.+.+|.+..+.-+ .|=.+|+|+.|+- ++.+|++|++||.|.+|.+..
T Consensus 82 g~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred cceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeeccccc
Confidence 444444444444444444 4555555555544432 2446899999998 789999999999999998742
Q ss_pred CCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 136 HNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
....+++..+..|+-+|+++...+. .. .++|+|.|.++++||+..+.. +.++ .....+.+++..|.++ .+..|+
T Consensus 161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~-rl~TaS~D~t~k~wdlS~g~L-Llti-~fp~si~av~lDpae~-~~yiGt 236 (476)
T KOG0646|consen 161 DHSVKPLHIFSDHTLSITDLQIGSGGTNA-RLYTASEDRTIKLWDLSLGVL-LLTI-TFPSSIKAVALDPAER-VVYIGT 236 (476)
T ss_pred CCCccceeeeccCcceeEEEEecCCCccc-eEEEecCCceEEEEEecccee-eEEE-ecCCcceeEEEccccc-EEEecC
Confidence 2245788999999999999998764 34 499999999999999999765 4443 2568899999999998 588999
Q ss_pred CCCeEEEEEcCCCCCCCC--CCCCCCCCCceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 214 TDRRLHVWDLSKIGEEQS--TEDAEDGPPELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.+|.|.+.++........ ...........+..+.||.+ .|+|++.+-||. +|++|+.||.+++||+.+.++++++
T Consensus 237 ~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt-lLlSGd~dg~VcvWdi~S~Q~iRtl 315 (476)
T KOG0646|consen 237 EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGT-LLLSGDEDGKVCVWDIYSKQCIRTL 315 (476)
T ss_pred CcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCcc-EEEeeCCCCCEEEEecchHHHHHHH
Confidence 999999988866542111 01111122344566789988 999999999999 9999999999999999999888877
Q ss_pred e
Q psy4571 290 R 290 (437)
Q Consensus 290 ~ 290 (437)
.
T Consensus 316 ~ 316 (476)
T KOG0646|consen 316 Q 316 (476)
T ss_pred h
Confidence 6
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=174.91 Aligned_cols=269 Identities=22% Similarity=0.288 Sum_probs=184.8
Q ss_pred EEecCceEEEEEeeec----------cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC
Q psy4571 82 SCILNISILFFEIIFT----------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE 151 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~----------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~ 151 (437)
.+..+|.|.++|.... .-+.|...|.++.|-| ++..|++++.|.++++||++.... .-...+.+|.+.
T Consensus 69 vadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l-~G~~~~~GH~~S 146 (720)
T KOG0321|consen 69 VADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRL-VGGRLNLGHTGS 146 (720)
T ss_pred EecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeecccee-ecceeecccccc
Confidence 3445677777774321 1234567899999999 889999999999999999995422 112347899999
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce--------------------------eeeEeccCCCceEE---EEEc
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKL--------------------------KLHSFESHKDEIFQ---VQWS 202 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~--------------------------~~~~~~~h~~~v~~---v~~~ 202 (437)
|.+++|.|.++.+|++|+.||.|.|||++-... .....+.+...|.+ +.+.
T Consensus 147 vkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f 226 (720)
T KOG0321|consen 147 VKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF 226 (720)
T ss_pred cchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE
Confidence 999999999999999999999999999974320 01122234444554 5555
Q ss_pred CCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc---cccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 203 PHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH---TAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 203 p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
.|... ||+++. |+.|+|||++........+... ...+..| .-.+.++.....|.+++|+|. |+.|+.|
T Consensus 227 kDe~t-laSaga~D~~iKVWDLRk~~~~~r~ep~~------~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~sIy~y 298 (720)
T KOG0321|consen 227 KDEST-LASAGAADSTIKVWDLRKNYTAYRQEPRG------SDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DNSIYFY 298 (720)
T ss_pred eccce-eeeccCCCcceEEEeecccccccccCCCc------ccCccCcccceeeeEEEEecCCCCeEEEEec-CCcEEEE
Confidence 66664 788777 9999999999876554432211 1112223 335777888888897776665 9999999
Q ss_pred eCCCCCCceeeeeeec-ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh-hhhhcCCCccccccC
Q psy4571 279 CDSTDSDTKTMRLDSI-RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE-QRQLLGTEEESSDRH 356 (437)
Q Consensus 279 d~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~-~~~~~~h~~~~~~~~ 356 (437)
|+.+............ ...-.+....+||+.++++|+.|.. .++|.+.+.+. ...+.||.-.|..+.
T Consensus 299 nm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~-----------ayiw~vs~~e~~~~~l~Ght~eVt~V~ 367 (720)
T KOG0321|consen 299 NMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQ-----------AYIWVVSSPEAPPALLLGHTREVTTVR 367 (720)
T ss_pred eccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcc-----------eeeeeecCccCChhhhhCcceEEEEEe
Confidence 9987644322221111 1112233477999999999999998 67888877654 456789988888887
Q ss_pred CCCCC-ccccc-------ccccc
Q psy4571 357 SSDND-TEDLN-------SIWSM 371 (437)
Q Consensus 357 ~~~~~-~~~~~-------~~w~~ 371 (437)
+.|.. ..+++ .+|++
T Consensus 368 w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 368 WLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred eccccCCCceeeccCcceEEEec
Confidence 76632 22222 28987
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=159.81 Aligned_cols=276 Identities=13% Similarity=0.140 Sum_probs=198.1
Q ss_pred cceeEEecCCcc------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCcee-----EEEe---------cCCCC
Q psy4571 20 NAFFTWSALPLS------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY-----DLVV---------NNYVA 79 (437)
Q Consensus 20 ~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~-----~~~~---------~~~~~ 79 (437)
+..++|+.+.-. =+.-.|.++.|+ +.+.+++|+|.|++..||+..-.... .... ..+.+
T Consensus 170 hTA~iWs~Esg~CL~~Y~GH~GSVNsikfh-~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~ 248 (481)
T KOG0300|consen 170 HTARIWSLESGACLATYTGHTGSVNSIKFH-NSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNR 248 (481)
T ss_pred cceeEEeeccccceeeecccccceeeEEec-cccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccc
Confidence 455666665433 234569999999 99999999999999999993211000 0000 00011
Q ss_pred eEE--EecCc-eEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 80 NIS--CILNI-SILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 80 ~i~--~~~~~-~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
... ...|+ +|++--.. -..+...|.++.|-. ++..+++++.|.+-.+||++ .+.++..+.+|....+.++
T Consensus 249 d~d~~~~sD~~tiRvPl~~---ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVE---tge~v~~LtGHd~ELtHcs 321 (481)
T KOG0300|consen 249 DTDSSEKSDGHTIRVPLMR---LTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVE---TGEVVNILTGHDSELTHCS 321 (481)
T ss_pred ccccccccCCceeeeeeee---eeccccceEehhhhc-Ccceeeeeeccccceeeeec---cCceeccccCcchhccccc
Confidence 110 11111 23222111 112556788888987 78899999999999999999 6788899999999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
-+|..+ ++++++.|.+.++||++..-..+..+.+|...|+++.|.-+.+ +++|+.|.+|+|||++++....
T Consensus 322 tHptQr-LVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~--vVSgSDDrTvKvWdLrNMRspl------ 392 (481)
T KOG0300|consen 322 THPTQR-LVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR--VVSGSDDRTVKVWDLRNMRSPL------ 392 (481)
T ss_pred cCCcce-EEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCc--eeecCCCceEEEeeeccccCcc------
Confidence 999888 7999999999999999975556778999999999999998875 7899999999999999875432
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee-eecccCCceeeeecCCC--Ccccc
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-DSIRSNGGISSTASPTA--SSTAS 313 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~s~~g--~~l~s 313 (437)
.+.. -.++++.++.+..++ +++.--.+..|++||++.....+.... ...|...+.+++|..+. .-|++
T Consensus 393 -------ATIR-tdS~~NRvavs~g~~-iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLft 463 (481)
T KOG0300|consen 393 -------ATIR-TDSPANRVAVSKGHP-IIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFT 463 (481)
T ss_pred -------eeee-cCCccceeEeecCCc-eEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCccccccc
Confidence 2232 256889999998888 888888899999999987654433322 22234445666775433 35677
Q ss_pred cCCCCccc
Q psy4571 314 ESPTPTNS 321 (437)
Q Consensus 314 ~s~d~~~~ 321 (437)
++.|..+-
T Consensus 464 cGFDR~v~ 471 (481)
T KOG0300|consen 464 CGFDRMVA 471 (481)
T ss_pred ccccceee
Confidence 77787743
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=166.70 Aligned_cols=222 Identities=18% Similarity=0.227 Sum_probs=173.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCC-eEEEecCceEEEEEeeecccc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVA-NISCILNISILFFEIIFTQNF 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~~~~ 100 (437)
+.-++.++.|. +++..++..+.|+.+++|+ .|++++....+..... -++...|.+|++||+....+.
T Consensus 218 s~g~it~~d~d-~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~ 296 (459)
T KOG0288|consen 218 SLGNITSIDFD-SDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCS 296 (459)
T ss_pred cCCCcceeeec-CCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhee
Confidence 34568899999 7788888999999999999 4567777776644433 567888999999998875543
Q ss_pred c---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 101 P---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
. ....+++|+.++ ..+++|..|++|+.||.+ ..........+. .|+++..++++.. +.+++.|.++.+.
T Consensus 297 kt~l~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~R---s~~~~~sv~~gg-~vtSl~ls~~g~~-lLsssRDdtl~vi 368 (459)
T KOG0288|consen 297 KTVLPGSQCNDIVCSI---SDVISGHFDKKVRFWDIR---SADKTRSVPLGG-RVTSLDLSMDGLE-LLSSSRDDTLKVI 368 (459)
T ss_pred ccccccccccceEecc---eeeeecccccceEEEecc---CCceeeEeecCc-ceeeEeeccCCeE-EeeecCCCceeee
Confidence 3 345677888764 578899999999999998 445566665554 8999999999997 7888999999999
Q ss_pred eCCCCceeeeEecc----CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 178 DLRNLKLKLHSFES----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 178 d~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
|+++... ...+.+ .....+.+.|+|++.| +++||.||.|+||++.+++....+ ...+....|
T Consensus 369 DlRt~eI-~~~~sA~g~k~asDwtrvvfSpd~~Y-vaAGS~dgsv~iW~v~tgKlE~~l------------~~s~s~~aI 434 (459)
T KOG0288|consen 369 DLRTKEI-RQTFSAEGFKCASDWTRVVFSPDGSY-VAAGSADGSVYIWSVFTGKLEKVL------------SLSTSNAAI 434 (459)
T ss_pred ecccccE-EEEeeccccccccccceeEECCCCce-eeeccCCCcEEEEEccCceEEEEe------------ccCCCCcce
Confidence 9998554 444432 1234889999999996 999999999999999998765442 122222369
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
++++|+|.|. -+++++.++.+.+|
T Consensus 435 ~s~~W~~sG~-~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 435 TSLSWNPSGS-GLLSADKQKAVTLW 458 (459)
T ss_pred EEEEEcCCCc-hhhcccCCcceEec
Confidence 9999999999 56699999999998
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=160.61 Aligned_cols=231 Identities=19% Similarity=0.252 Sum_probs=178.5
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC--cEEEEEeCCCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE--YILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~ 179 (437)
|..++++++.+ +.++|+|+.|-+|+|||+. ...++..+..|.+.|+++.|.+.-. + |++|+.||.|.+|+.
T Consensus 42 H~~sitavAVs---~~~~aSGssDetI~IYDm~---k~~qlg~ll~HagsitaL~F~~~~S~sh-LlS~sdDG~i~iw~~ 114 (362)
T KOG0294|consen 42 HAGSITALAVS---GPYVASGSSDETIHIYDMR---KRKQLGILLSHAGSITALKFYPPLSKSH-LLSGSDDGHIIIWRV 114 (362)
T ss_pred cccceeEEEec---ceeEeccCCCCcEEEEecc---chhhhcceeccccceEEEEecCCcchhh-eeeecCCCcEEEEEc
Confidence 45678888885 6899999999999999999 5677778889999999999998654 5 999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
..-. .+..+++|.+.|+.++.+|.++ +-++.+.|+.++.||+-++..-.. ..+ . ...+.|.|+
T Consensus 115 ~~W~-~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a~v------------~~L-~--~~at~v~w~ 177 (362)
T KOG0294|consen 115 GSWE-LLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVAFV------------LNL-K--NKATLVSWS 177 (362)
T ss_pred CCeE-EeeeecccccccceeEecCCCc-eEEEEcCCceeeeehhhcCcccee------------ecc-C--CcceeeEEc
Confidence 9864 4889999999999999999998 677888999999999988754322 112 1 223449999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
|.|.+ ++.++.+ .|-+|.+.+.+....+... ....++. --++..|++|..++. |++||...+
T Consensus 178 ~~Gd~-F~v~~~~-~i~i~q~d~A~v~~~i~~~----~r~l~~~-~l~~~~L~vG~d~~~-----------i~~~D~ds~ 239 (362)
T KOG0294|consen 178 PQGDH-FVVSGRN-KIDIYQLDNASVFREIENP----KRILCAT-FLDGSELLVGGDNEW-----------ISLKDTDSD 239 (362)
T ss_pred CCCCE-EEEEecc-EEEEEecccHhHhhhhhcc----ccceeee-ecCCceEEEecCCce-----------EEEeccCCC
Confidence 99994 5455444 6889999987766665432 2233333 356778888888877 899999888
Q ss_pred hhhhhhcCCCccccccCC--CCCCcccc-------ccccccCHH
Q psy4571 340 EEQRQLLGTEEESSDRHS--SDNDTEDL-------NSIWSMTDE 374 (437)
Q Consensus 340 ~~~~~~~~h~~~~~~~~~--~~~~~~~~-------~~~w~~~~~ 374 (437)
.....+.+|+++|-.+.+ .|++..+. ..+|+++-+
T Consensus 240 ~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 240 TPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 889999999999888762 22333322 349998544
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=166.93 Aligned_cols=259 Identities=11% Similarity=0.091 Sum_probs=176.8
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
++...++.+.+||..... .+.....+.+++|+|++..++++++.++.|++||..+ .+.+..+..+.. +..++|
T Consensus 5 ~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~~~-~~~~~~ 80 (300)
T TIGR03866 5 VSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLAT---GEVIGTLPSGPD-PELFAL 80 (300)
T ss_pred EEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCC---CcEEEeccCCCC-ccEEEE
Confidence 456778999999975443 2333456788999995443456778899999999984 444555544433 567899
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~~~~~~~~~ 236 (437)
+|+++.++++++.|+.|++||+++.+. +..+. +...+.+++|+|++.. +++++.++ .+.+||..+.....
T Consensus 81 ~~~g~~l~~~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~d~~~~~~~~------ 151 (300)
T TIGR03866 81 HPNGKILYIANEDDNLVTVIDIETRKV-LAEIP-VGVEPEGMAVSPDGKI-VVNTSETTNMAHFIDTKTYEIVD------ 151 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCCCeE-EeEee-CCCCcceEEECCCCCE-EEEEecCCCeEEEEeCCCCeEEE------
Confidence 999997556667799999999998543 55554 2345688999999985 66666654 57788987643211
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec--c--cCCceeeeecCCCCccc
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI--R--SNGGISSTASPTASSTA 312 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~--~~~~~~~~~s~~g~~l~ 312 (437)
... ....+.+++|+|+++.+++++..++.|++||+++++....+..... . ......++++|+|++++
T Consensus 152 --------~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~ 222 (300)
T TIGR03866 152 --------NVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAF 222 (300)
T ss_pred --------EEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEE
Confidence 111 1234577999999996656667799999999999877666543211 1 11234567899999754
Q ss_pred cc-CCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc--------ccccCH
Q psy4571 313 SE-SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS--------IWSMTD 373 (437)
Q Consensus 313 s~-s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~--------~w~~~~ 373 (437)
.+ ..+.. +.+||..+++....+. +...+..+.++|+|..+... +|++..
T Consensus 223 ~~~~~~~~-----------i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 223 VALGPANR-----------VAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred EEcCCCCe-----------EEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 43 33333 7899998887765543 22357788899999876542 677654
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=172.43 Aligned_cols=281 Identities=15% Similarity=0.165 Sum_probs=203.1
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe------------cCCCCe-EEEecCceEEEEEeeec
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV------------NNYVAN-ISCILNISILFFEIIFT 97 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~------------~~~~~~-i~~~~~~~i~~~~~~~~ 97 (437)
++.--.|.+++|..--..++++|...|.+-+||.+......... .+.... +++..|.++++|-...+
T Consensus 241 k~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~ 320 (910)
T KOG1539|consen 241 KQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSG 320 (910)
T ss_pred EccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCC
Confidence 33346789999994445677888888999999976655444333 222222 26667888887743321
Q ss_pred --------cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC--------------------------------
Q psy4571 98 --------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN-------------------------------- 137 (437)
Q Consensus 98 --------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~-------------------------------- 137 (437)
-+..|..+..|++|.-.++..+.+++.|++.+.+++....
T Consensus 321 dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~ 400 (910)
T KOG1539|consen 321 DGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVE 400 (910)
T ss_pred CCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCccee
Confidence 1234667888888886577778888888877776653210
Q ss_pred ---------------------------------CCCCe---eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 138 ---------------------------------VSKPS---HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 138 ---------------------------------~~~~~---~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.++.+ ..++.....+++++.++.|.+ .+.|+..|.|-++++++
T Consensus 401 fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF-~~IG~S~G~Id~fNmQS 479 (910)
T KOG1539|consen 401 FAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNF-VFIGYSKGTIDRFNMQS 479 (910)
T ss_pred eecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCce-EEEeccCCeEEEEEccc
Confidence 00000 001112256889999999995 88999999999999998
Q ss_pred CceeeeEe---ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC----------------------
Q psy4571 182 LKLKLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE---------------------- 236 (437)
Q Consensus 182 ~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---------------------- 236 (437)
+-. ...+ ..|.++|+.++....++ ++++++.+|.+++||.........+....
T Consensus 480 Gi~-r~sf~~~~ah~~~V~gla~D~~n~-~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~ 557 (910)
T KOG1539|consen 480 GIH-RKSFGDSPAHKGEVTGLAVDGTNR-LLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFS 557 (910)
T ss_pred Cee-ecccccCccccCceeEEEecCCCc-eEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCcee
Confidence 654 4555 58999999999998887 69999999999999998876433322100
Q ss_pred -----CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc
Q psy4571 237 -----DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 237 -----~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 311 (437)
....+.++.+.||.+.|++++|||||+| +++++.|++|++||+.++.++-.+.. ...+.++.+||+|.+|
T Consensus 558 I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrW-lisasmD~tIr~wDlpt~~lID~~~v----d~~~~sls~SPngD~L 632 (910)
T KOG1539|consen 558 IRVVDVVTRKVVREFWGHGNRITDMTFSPDGRW-LISASMDSTIRTWDLPTGTLIDGLLV----DSPCTSLSFSPNGDFL 632 (910)
T ss_pred EEEEEchhhhhhHHhhccccceeeeEeCCCCcE-EEEeecCCcEEEEeccCcceeeeEec----CCcceeeEECCCCCEE
Confidence 1112345567799999999999999994 66999999999999999998887765 4567888999999999
Q ss_pred cccCCCCc
Q psy4571 312 ASESPTPT 319 (437)
Q Consensus 312 ~s~s~d~~ 319 (437)
|+...|..
T Consensus 633 AT~Hvd~~ 640 (910)
T KOG1539|consen 633 ATVHVDQN 640 (910)
T ss_pred EEEEecCc
Confidence 99987744
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-20 Score=170.48 Aligned_cols=293 Identities=15% Similarity=0.157 Sum_probs=216.6
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCC------------------CceeEEEecCCCCeEE-EecCceEEEEEeee-
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNT------------------PFLYDLVVNNYVANIS-CILNISILFFEIIF- 96 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~------------------~~~~~~~~~~~~~~i~-~~~~~~i~~~~~~~- 96 (437)
|+++-++ |.+..|+++|.|++..+|.... +.-++..|+++...+. -+..|..++|..+.
T Consensus 270 V~sv~W~-p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~ 348 (764)
T KOG1063|consen 270 VYSVWWH-PEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDK 348 (764)
T ss_pred eEEEEEc-cchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCc
Confidence 8899999 8899999999999999999442 2255666777776664 45678899998221
Q ss_pred ------ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 97 ------TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 97 ------~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.-.-.|-..|.+++|+| .+.+|++.+.|.+-|++-.-. ......+...+-|...++|++|-+... .+++|.
T Consensus 349 ~~w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~-~FVSgA 426 (764)
T KOG1063|consen 349 TFWTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL-QFVSGA 426 (764)
T ss_pred cceeeccccccccccceeeeecC-CCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCc-eeeecc
Confidence 11123567899999999 678999999999999987651 112345556677888999999998533 599999
Q ss_pred CCCeEEEEeCCCC-------------------------------------------c-----------------------
Q psy4571 170 ADKTVALWDLRNL-------------------------------------------K----------------------- 183 (437)
Q Consensus 170 ~dg~i~lwd~~~~-------------------------------------------~----------------------- 183 (437)
....+|+|+.... .
T Consensus 427 dEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~E 506 (764)
T KOG1063|consen 427 DEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTE 506 (764)
T ss_pred cceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChH
Confidence 9999999975210 0
Q ss_pred ---------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-----eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 184 ---------LKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 184 ---------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
..+..+.+|...|++++.+|+++ ++||++... .|++|+..+-...+ .+.+|
T Consensus 507 dqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gn-liASaCKS~~~ehAvI~lw~t~~W~~~~--------------~L~~H 571 (764)
T KOG1063|consen 507 DQLQQNTLWPEVHKLYGHGYEVYALAISPTGN-LIASACKSSLKEHAVIRLWNTANWLQVQ--------------ELEGH 571 (764)
T ss_pred HHHHHhccchhhHHhccCceeEEEEEecCCCC-EEeehhhhCCccceEEEEEeccchhhhh--------------eeccc
Confidence 00234557889999999999998 799987654 39999988754433 37899
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
.-.|+.++|+|||+ +|++.+.|.++.+|....... ...+.....|..-+..+.|+|++.+++++|.|.+
T Consensus 572 sLTVT~l~FSpdg~-~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~--------- 641 (764)
T KOG1063|consen 572 SLTVTRLAFSPDGR-YLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKK--------- 641 (764)
T ss_pred ceEEEEEEECCCCc-EEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCce---------
Confidence 99999999999999 677999999999999854321 1222223334555667799999999999999999
Q ss_pred cccccccchhh--hhhhh--hcCCCccccccCCCC
Q psy4571 329 QGLVLFDILVC--EEQRQ--LLGTEEESSDRHSSD 359 (437)
Q Consensus 329 ~~i~~wd~~~~--~~~~~--~~~h~~~~~~~~~~~ 359 (437)
+++|..... +.+.. ...+...++++.+.|
T Consensus 642 --VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~ 674 (764)
T KOG1063|consen 642 --VKVWEEPDLRDKYISRFACLKFSLAVTAVAYLP 674 (764)
T ss_pred --EEEEeccCchhhhhhhhchhccCCceeeEEeec
Confidence 667766666 33333 345667777777555
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.5e-20 Score=171.67 Aligned_cols=337 Identities=15% Similarity=0.144 Sum_probs=237.0
Q ss_pred eEEEEeeCCCc--ceEEEeeccCceEeeec------------------------------------------CCCceeEE
Q psy4571 37 FYRLCVAEPFD--DAVEERVINEEYKIWKK------------------------------------------NTPFLYDL 72 (437)
Q Consensus 37 v~~~~~~~~~~--~~l~tgs~d~~v~iw~~------------------------------------------~~~~~~~~ 72 (437)
|-.++|..+.+ -+++++|.|..||||+. |...++++
T Consensus 194 Irsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv 273 (764)
T KOG1063|consen 194 IRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSV 273 (764)
T ss_pred hhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEE
Confidence 33466765443 57899999999999982 23457777
Q ss_pred EecCCC-CeEEEecCceEEEEEeee-----------ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC
Q psy4571 73 VVNNYV-ANISCILNISILFFEIIF-----------TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK 140 (437)
Q Consensus 73 ~~~~~~-~~i~~~~~~~i~~~~~~~-----------~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~ 140 (437)
.|.+.. ..++++.|.++.+|.-.. +..-.....-....|+| +++.+++-+..|-.++|..++.....
T Consensus 274 ~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~-n~~~ii~~g~~Gg~hlWkt~d~~~w~ 352 (764)
T KOG1063|consen 274 WWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSP-NSNVIIAHGRTGGFHLWKTKDKTFWT 352 (764)
T ss_pred EEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcC-CCCEEEEecccCcEEEEeccCcccee
Confidence 787776 556889999999996321 11111233567899999 67888888899999999954333344
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee---eeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
+.....||.+.|.+++|+|.|.+ |++.+.|.+-|++-.-..+.. +..-+-|....+|++|-+.. ..+++|.....
T Consensus 353 ~~~~iSGH~~~V~dv~W~psGef-lLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~-~~FVSgAdEKV 430 (764)
T KOG1063|consen 353 QEPVISGHVDGVKDVDWDPSGEF-LLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED-LQFVSGADEKV 430 (764)
T ss_pred eccccccccccceeeeecCCCCE-EEEeccccceeeecccccccceeeecccccccccceeeehccCC-ceeeeccccee
Confidence 55566799999999999999996 999999999999976522211 22234578889999998843 35889998899
Q ss_pred EEEEEcCCCC-----------CCC--CCC------------------C--------------------CCCCCC------
Q psy4571 218 LHVWDLSKIG-----------EEQ--STE------------------D--------------------AEDGPP------ 240 (437)
Q Consensus 218 i~vwd~~~~~-----------~~~--~~~------------------~--------------------~~~~~~------ 240 (437)
+|+|+....- ... ... . ....|+
T Consensus 431 lRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq 510 (764)
T KOG1063|consen 431 LRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQ 510 (764)
T ss_pred eeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHH
Confidence 9999875210 000 000 0 000000
Q ss_pred -----ceEEEecCccccEEEEEEccCCCeEEEEEeC-----CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 241 -----ELLFIHGGHTAKISDFSWNPNEPWVICSVSE-----DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 241 -----~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
..+..+-||...|.+++.+|+++ ++||++. ...|++|+..+....+.+.. |...+..++|||||++
T Consensus 511 ~~tLwPEv~KLYGHGyEv~~l~~s~~gn-liASaCKS~~~ehAvI~lw~t~~W~~~~~L~~---HsLTVT~l~FSpdg~~ 586 (764)
T KOG1063|consen 511 QNTLWPEVHKLYGHGYEVYALAISPTGN-LIASACKSSLKEHAVIRLWNTANWLQVQELEG---HSLTVTRLAFSPDGRY 586 (764)
T ss_pred HhccchhhHHhccCceeEEEEEecCCCC-EEeehhhhCCccceEEEEEeccchhhhheecc---cceEEEEEEECCCCcE
Confidence 11234458999999999999999 8988864 45699999999888776665 6678899999999999
Q ss_pred ccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCHHHHHHHHHhh
Q psy4571 311 TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTDEQREYYKTQF 383 (437)
Q Consensus 311 l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~~~~~~~~~~f 383 (437)
|++.+.|++.++|... -|+........++.|.-.+.+..++|++..+++. +|...... ..+-.+|
T Consensus 587 LLsvsRDRt~sl~~~~-------~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~-d~~i~~~ 658 (764)
T KOG1063|consen 587 LLSVSRDRTVSLYEVQ-------EDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLR-DKYISRF 658 (764)
T ss_pred EEEeecCceEEeeeee-------cccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCch-hhhhhhh
Confidence 9999999996666431 1111122234478899999999999999977765 89885543 2233344
Q ss_pred hcccc
Q psy4571 384 HNLQR 388 (437)
Q Consensus 384 ~~~~~ 388 (437)
..+++
T Consensus 659 a~~~~ 663 (764)
T KOG1063|consen 659 ACLKF 663 (764)
T ss_pred chhcc
Confidence 44443
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=169.70 Aligned_cols=233 Identities=16% Similarity=0.218 Sum_probs=182.4
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
|..|.++||+. ..+.||.+-.+|.|.+|++... .-....+.++ ...|-+++|++.++ |.+.+.+|.|.-||+.+
T Consensus 25 Ps~I~slA~s~-kS~~lAvsRt~g~IEiwN~~~~--w~~~~vi~g~~drsIE~L~W~e~~R--LFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 25 PSEIVSLAYSH-KSNQLAVSRTDGNIEIWNLSNN--WFLEPVIHGPEDRSIESLAWAEGGR--LFSSGLSGSITEWDLHT 99 (691)
T ss_pred ccceEEEEEec-cCCceeeeccCCcEEEEccCCC--ceeeEEEecCCCCceeeEEEccCCe--EEeecCCceEEEEeccc
Confidence 67899999999 5778999999999999999853 2333444454 45799999997665 89999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.+. ...+....+.|.+++.+|.+. .++.|+.||.+..++...+.... -..+...++.|.+++|+|+
T Consensus 100 lk~-~~~~d~~gg~IWsiai~p~~~-~l~IgcddGvl~~~s~~p~~I~~------------~r~l~rq~sRvLslsw~~~ 165 (691)
T KOG2048|consen 100 LKQ-KYNIDSNGGAIWSIAINPENT-ILAIGCDDGVLYDFSIGPDKITY------------KRSLMRQKSRVLSLSWNPT 165 (691)
T ss_pred Cce-eEEecCCCcceeEEEeCCccc-eEEeecCCceEEEEecCCceEEE------------EeecccccceEEEEEecCC
Confidence 776 677777889999999999997 68999999977777666543222 1335556789999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeee--eeccc---CCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRL--DSIRS---NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~---~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+. .+++|+.||.|++||+..+........ ..... .-+.++.+- ....+++|...|+ +.+||.
T Consensus 166 ~~-~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~-----------V~FWd~ 232 (691)
T KOG2048|consen 166 GT-KIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGT-----------VTFWDS 232 (691)
T ss_pred cc-EEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe-ecCcEEEecCCce-----------EEEEcc
Confidence 98 688999999999999999877663221 11111 112233333 5567888888888 899999
Q ss_pred hhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 337 LVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 337 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
..|.++.....|...+.+++..++++.+.+.
T Consensus 233 ~~gTLiqS~~~h~adVl~Lav~~~~d~vfsa 263 (691)
T KOG2048|consen 233 IFGTLIQSHSCHDADVLALAVADNEDRVFSA 263 (691)
T ss_pred cCcchhhhhhhhhcceeEEEEcCCCCeEEEc
Confidence 9999999999999999999999987655443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-19 Score=153.85 Aligned_cols=213 Identities=17% Similarity=0.211 Sum_probs=156.8
Q ss_pred cCCCcceEEeeCC---CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 102 FPLSRQDVAWHLL---HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 102 ~~~~v~~~~~sp~---~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
....-..++|+-+ ++-++|+|+.-|.|+|.|+. ..+....+.+|...|+.|.+.|+...+++++|.|.+|++|+
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~---~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwn 164 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVV---SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWN 164 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecc---hhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEe
Confidence 3455667777653 34588899999999999999 56777888999999999999999988999999999999999
Q ss_pred CCCCceeeeEe---ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC--------------------
Q psy4571 179 LRNLKLKLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-------------------- 235 (437)
Q Consensus 179 ~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-------------------- 235 (437)
+++... +..+ .+|.+.|.++.|+++|.+ +++++.|.+|++|++...+-...++..
T Consensus 165 I~~~~C-v~VfGG~egHrdeVLSvD~~~~gd~-i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp 242 (385)
T KOG1034|consen 165 IQTDVC-VAVFGGVEGHRDEVLSVDFSLDGDR-IASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFP 242 (385)
T ss_pred ccCCeE-EEEecccccccCcEEEEEEcCCCCe-eeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccc
Confidence 999554 6554 579999999999999995 999999999999999843211111000
Q ss_pred ------------------------------------------------CCCCCceEEEecCccccEEEE--EEccCCCeE
Q psy4571 236 ------------------------------------------------EDGPPELLFIHGGHTAKISDF--SWNPNEPWV 265 (437)
Q Consensus 236 ------------------------------------------------~~~~~~~~~~~~~h~~~v~~l--~~~p~~~~~ 265 (437)
..+....+..+.-....+.-+ +|.|-++ .
T Consensus 243 ~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~-~ 321 (385)
T KOG1034|consen 243 DFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQK-M 321 (385)
T ss_pred cccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHH-H
Confidence 000001122222222334444 4456667 7
Q ss_pred EEEEeCCCeEEEEeCCCCCCc-eeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 266 ICSVSEDNIMQEYCDSTDSDT-KTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
||.|...|.+++||++..++. .+..........+...+||.||.+|+....|+++
T Consensus 322 la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~V 377 (385)
T KOG1034|consen 322 LALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTV 377 (385)
T ss_pred HhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcE
Confidence 889999999999999988773 2333333344455666999999999999999984
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=188.20 Aligned_cols=236 Identities=20% Similarity=0.277 Sum_probs=186.3
Q ss_pred ccCCCcceEEeeCCCCC---EEEEEECCCcEEEEEcCC---CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 101 PFPLSRQDVAWHLLHES---LFGSVADDQKLMIWDTRS---HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~---~l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
.....-++++|.+.+.. ++|.|..||.|.+||... +.....+.....|++.|..+.|++.+.++||+|+.||.|
T Consensus 62 ~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI 141 (1049)
T KOG0307|consen 62 QSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI 141 (1049)
T ss_pred cccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE
Confidence 34557789999986554 699999999999999875 333456677889999999999999999889999999999
Q ss_pred EEEeCCCCceeeeE-eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 175 ALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 175 ~lwd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
.|||+...+.+... .......|.+++|+..-.++|++++.+|++.|||++..+.+..+. ..+....+
T Consensus 142 ~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls------------~~~~~~~~ 209 (1049)
T KOG0307|consen 142 LIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS------------DTPGRMHC 209 (1049)
T ss_pred EEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc------------cCCCccce
Confidence 99999986654322 122457899999999888899999999999999999875544311 12222458
Q ss_pred EEEEEccCCCeEEEEEeCC---CeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCC-CcccccCCCCcccccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSED---NIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~ 328 (437)
..++|+|++...+++++.| -.|.+||++... +.+.++ .|..+++.+.|++.+ .++++++.|+.
T Consensus 210 S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~---~H~~GilslsWc~~D~~lllSsgkD~~--------- 277 (1049)
T KOG0307|consen 210 SVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILE---GHQRGILSLSWCPQDPRLLLSSGKDNR--------- 277 (1049)
T ss_pred eeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhc---ccccceeeeccCCCCchhhhcccCCCC---------
Confidence 8999999997667777654 569999988643 344443 478899999999877 89999999998
Q ss_pred cccccccchhhhhhhhhcCCCccccccCCCCCCc
Q psy4571 329 QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
+.+|+..+|+.+..+....+-...+.|.|..-
T Consensus 278 --ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 278 --IICWNPNTGEVLGELPAQGNWCFDVQWCPRNP 309 (1049)
T ss_pred --eeEecCCCceEeeecCCCCcceeeeeecCCCc
Confidence 89999999999998877666777777777544
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=165.66 Aligned_cols=205 Identities=16% Similarity=0.179 Sum_probs=161.4
Q ss_pred cCCCcceEEeeCCCC-CEEEEEECCCcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLHE-SLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~-~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
+..+|.+++|+|... +++|+|...|.|-+||+... ....-+..+..|.++|.++.|+|.+...+++.|.||+|++-|+
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~ 264 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDF 264 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeee
Confidence 567899999999766 78999999999999999522 2234456778999999999999988878999999999999999
Q ss_pred CCCcee-eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 180 RNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 180 ~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+..... +...........++.|+.+.+. ++.|..=|...+||+++...... .+.-|...|.+|++
T Consensus 265 ~~~i~e~v~s~~~d~~~fs~~d~~~e~~~-vl~~~~~G~f~~iD~R~~~s~~~-------------~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 265 EGNISEEVLSLDTDNIWFSSLDFSAESRS-VLFGDNVGNFNVIDLRTDGSEYE-------------NLRLHKKKITSVAL 330 (498)
T ss_pred cchhhHHHhhcCccceeeeeccccCCCcc-EEEeecccceEEEEeecCCccch-------------hhhhhhcccceeec
Confidence 874321 2233334456778888888775 56666666999999998764322 25567789999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+|..+++++|+|.|++.+|||++....... +.....|...+.++.|||.|-.|++.+.|..+
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~I 393 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEI 393 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCce
Confidence 999999999999999999999997655443 22233356677778999999999999999983
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=172.97 Aligned_cols=258 Identities=17% Similarity=0.186 Sum_probs=195.7
Q ss_pred cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 100 FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
+.+..+-+.++|.| ++..+++++.||.|++|+..... ..+ ..+..+...|.+++-. +.+ |++|+.+++|.++..
T Consensus 10 yaht~G~t~i~~d~-~gefi~tcgsdg~ir~~~~~sd~-e~P-~ti~~~g~~v~~ia~~--s~~-f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 10 YAHTGGLTLICYDP-DGEFICTCGSDGDIRKWKTNSDE-EEP-ETIDISGELVSSIACY--SNH-FLTGSEQNTVLRYKF 83 (933)
T ss_pred hhccCceEEEEEcC-CCCEEEEecCCCceEEeecCCcc-cCC-chhhccCceeEEEeec--ccc-eEEeeccceEEEeeC
Confidence 34566778999999 56799999999999999987541 111 1222267778888765 344 999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
..+.. -..+....-++.+++|+.+|. .+|.||.|-.|++-++...... ..+.+|+++|.+|.|+
T Consensus 84 ps~~~-~~iL~Rftlp~r~~~v~g~g~-~iaagsdD~~vK~~~~~D~s~~--------------~~lrgh~apVl~l~~~ 147 (933)
T KOG1274|consen 84 PSGEE-DTILARFTLPIRDLAVSGSGK-MIAAGSDDTAVKLLNLDDSSQE--------------KVLRGHDAPVLQLSYD 147 (933)
T ss_pred CCCCc-cceeeeeeccceEEEEecCCc-EEEeecCceeEEEEeccccchh--------------eeecccCCceeeeeEc
Confidence 88664 334555678999999999998 4999999999999999886544 3478999999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc-----cCCceeeeecCCCCcccccCCCCcccccccccccccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR-----SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF 334 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~w 334 (437)
|.+. +||+.+.||.|++||++++.+...+..-... ......++|+|+|..++....++. |+++
T Consensus 148 p~~~-fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~-----------Vkvy 215 (933)
T KOG1274|consen 148 PKGN-FLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT-----------VKVY 215 (933)
T ss_pred CCCC-EEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe-----------EEEE
Confidence 9999 8999999999999999999887766532211 223455699999888888888888 5555
Q ss_pred cchhhhhhhhhc--CCCccccccCCCCCCcccccc-------ccccCHHHHHHHHHhhhccccccc
Q psy4571 335 DILVCEEQRQLL--GTEEESSDRHSSDNDTEDLNS-------IWSMTDEQREYYKTQFHNLQRHKS 391 (437)
Q Consensus 335 d~~~~~~~~~~~--~h~~~~~~~~~~~~~~~~~~~-------~w~~~~~~~~~~~~~f~~~~~~~~ 391 (437)
+....+....+. -+....+.+.|+|+|++++.+ +|+++.-++..+......+.+.++
T Consensus 216 ~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~~~~~~~Vc~~aw~p~ 281 (933)
T KOG1274|consen 216 SRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHERHEFKRAVCCEAWKPN 281 (933)
T ss_pred ccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchhccccceeEEEecCCC
Confidence 555655555552 233447888999999999886 999976555444445555555554
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=164.52 Aligned_cols=257 Identities=14% Similarity=0.172 Sum_probs=179.8
Q ss_pred cceEEEeeccCceEeee-----------------cCCCceeEEEecCCC-CeEEEecCceEEEEEeeecc------cccc
Q psy4571 47 DDAVEERVINEEYKIWK-----------------KNTPFLYDLVVNNYV-ANISCILNISILFFEIIFTQ------NFPF 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~-----------------~~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~------~~~~ 102 (437)
..+|+.+-.||.|.+++ .|-+.++++.|-+.. ..+++++|.++++||+.... .+.|
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH 143 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH 143 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccc
Confidence 56788888899888887 356778899886643 34588999999999976433 4567
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC---------------C---------CCCeeeeccCCCCeEE---E
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN---------------V---------SKPSHTVDAHTAEVNC---L 155 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~---------------~---------~~~~~~~~~h~~~v~~---l 155 (437)
..+|.+++|.|.+...|++|+.||.|.|||++-.. . .+.+...+++...|.+ +
T Consensus 144 ~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTv 223 (720)
T KOG0321|consen 144 TGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTV 223 (720)
T ss_pred ccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEE
Confidence 88999999999999999999999999999996321 0 0112223345555555 5
Q ss_pred EEeCCCCcEEEEEeC-CCeEEEEeCCCCcee-------eeEeccC---CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC
Q psy4571 156 SFNPYSEYILATGSA-DKTVALWDLRNLKLK-------LHSFESH---KDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~-dg~i~lwd~~~~~~~-------~~~~~~h---~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~ 224 (437)
-+..|... ||+++. |+.|++||++..... ...+..| ...+.++.....|.+++|+|. |+.|+.|++.
T Consensus 224 v~fkDe~t-laSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~sIy~ynm~ 301 (720)
T KOG0321|consen 224 VLFKDEST-LASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DNSIYFYNMR 301 (720)
T ss_pred EEEeccce-eeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEec-CCcEEEEecc
Confidence 56667774 888888 999999999975431 1112223 345778888888998777765 9999999998
Q ss_pred CCCCCCCCCCCCCCCCceEEEecCcccc--EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 225 KIGEEQSTEDAEDGPPELLFIHGGHTAK--ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
.... .+++.+.++... -..-..+|++. .+++|+.|...++|.+.+.+.-..+.. .+...+..+
T Consensus 302 s~s~------------sP~~~~sg~~~~sf~vks~lSpd~~-~l~SgSsd~~ayiw~vs~~e~~~~~l~--Ght~eVt~V 366 (720)
T KOG0321|consen 302 SLSI------------SPVAEFSGKLNSSFYVKSELSPDDC-SLLSGSSDEQAYIWVVSSPEAPPALLL--GHTREVTTV 366 (720)
T ss_pred ccCc------------CchhhccCcccceeeeeeecCCCCc-eEeccCCCcceeeeeecCccCChhhhh--CcceEEEEE
Confidence 8643 222334444321 11223689999 688999999999999998765443332 234456666
Q ss_pred eecCCC-CcccccCCCCcc
Q psy4571 303 TASPTA-SSTASESPTPTN 320 (437)
Q Consensus 303 ~~s~~g-~~l~s~s~d~~~ 320 (437)
.|.|.. .-+++++.|..+
T Consensus 367 ~w~pS~~t~v~TcSdD~~~ 385 (720)
T KOG0321|consen 367 RWLPSATTPVATCSDDFRV 385 (720)
T ss_pred eeccccCCCceeeccCcce
Confidence 775533 345666888883
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-19 Score=149.14 Aligned_cols=222 Identities=18% Similarity=0.249 Sum_probs=161.7
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEe-CC-CCcEEEEEeCCCeEEEEeC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFN-PY-SEYILATGSADKTVALWDL 179 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~-~~-~~~~l~sgs~dg~i~lwd~ 179 (437)
..-|+|+.|.+ .|+.+|+|+.|++|+|||.++ .+........+.|.+.|..+.|. |. |+ ++|+++.|+++.||.-
T Consensus 13 ~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGq-vvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 13 KDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQ-VVATCSYDRTVSIWEE 90 (361)
T ss_pred cceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccc-eEEEEecCCceeeeee
Confidence 35588999999 789999999999999999643 33455667788999999999995 44 55 7999999999999986
Q ss_pred CCCc--------eeeeEeccCCCceEEEEEcCCCC-cEEEEEeCCCeEEEEEcCCCCCCCCCCC----------------
Q psy4571 180 RNLK--------LKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTED---------------- 234 (437)
Q Consensus 180 ~~~~--------~~~~~~~~h~~~v~~v~~~p~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~---------------- 234 (437)
.... ....++......|+++.|.|... -.+|+++.||.+|||+............
T Consensus 91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~ 170 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQ 170 (361)
T ss_pred cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccC
Confidence 3211 11345566778999999999632 2589999999999999865432111100
Q ss_pred ------------------------------------CCCC-CCceEEEecCccccEEEEEEccCCC---eEEEEEeCCCe
Q psy4571 235 ------------------------------------AEDG-PPELLFIHGGHTAKISDFSWNPNEP---WVICSVSEDNI 274 (437)
Q Consensus 235 ------------------------------------~~~~-~~~~~~~~~~h~~~v~~l~~~p~~~---~~l~s~~~dg~ 274 (437)
...+ ....+..+.+|+.+|++|+|.|.-. +++|+++.||
T Consensus 171 ~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg- 249 (361)
T KOG2445|consen 171 PCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG- 249 (361)
T ss_pred cceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-
Confidence 0000 1122334557899999999999642 5899999999
Q ss_pred EEEEeCCCCC-----------------CceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccc
Q psy4571 275 MQEYCDSTDS-----------------DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY 327 (437)
Q Consensus 275 i~iwd~~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~ 327 (437)
|+||.+.... ++..+.....|...+..+.|.-.|..|++.+.||.+++|..++
T Consensus 250 v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 250 VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence 9999987421 1122222334556788889999999999999999976666554
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=147.11 Aligned_cols=240 Identities=17% Similarity=0.237 Sum_probs=183.3
Q ss_pred cccceeEEEEeeCCC--cceEEEeeccC----ceEeeecC--C------------CceeEEEecCCCC----eEEEecCc
Q psy4571 32 HSIYRFYRLCVAEPF--DDAVEERVINE----EYKIWKKN--T------------PFLYDLVVNNYVA----NISCILNI 87 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~--~~~l~tgs~d~----~v~iw~~~--~------------~~~~~~~~~~~~~----~i~~~~~~ 87 (437)
.++|..|++.|+... ..+|+.||... .|.|-... + -.+..+.|.|... .+.+..+.
T Consensus 42 ~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D 121 (364)
T KOG0290|consen 42 NAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD 121 (364)
T ss_pred cCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC
Confidence 467888899888543 45788887654 44444421 1 1234455555542 23556677
Q ss_pred eEEEEEeee-------------ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEE
Q psy4571 88 SILFFEIIF-------------TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC 154 (437)
Q Consensus 88 ~i~~~~~~~-------------~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 154 (437)
.+++|.+.. ..+-.+..++++..|+..+.+++.+.+-|-+..|||++++........+-+|..+|..
T Consensus 122 ~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~D 201 (364)
T KOG0290|consen 122 FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYD 201 (364)
T ss_pred eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeE
Confidence 899997542 1223356689999999999999999999999999999965444456677899999999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--CCCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCCCCC
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQS 231 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~~~~ 231 (437)
++|...+..+||+.+.||++|+||++......-.++. ...+...++|+++..+++|+-..|. .|.+.|++..
T Consensus 202 Iaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P----- 276 (364)
T KOG0290|consen 202 IAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP----- 276 (364)
T ss_pred EEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC-----
Confidence 9999988889999999999999999985542223332 2467889999999888788766554 5999999984
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
..++..+.+|.+.|++|+|.|.....++|++.|..+.+||+.+..
T Consensus 277 --------~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~ 321 (364)
T KOG0290|consen 277 --------CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMP 321 (364)
T ss_pred --------CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccc
Confidence 456677999999999999999988889999999999999998653
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.7e-18 Score=152.16 Aligned_cols=256 Identities=16% Similarity=0.115 Sum_probs=191.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeEEEecCceEEEEEeee--ccccc
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANISCILNISILFFEIIF--TQNFP 101 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~--~~~~~ 101 (437)
--|.|++|. ++++.+ ||..+|.+.||+. |.+.++.+.+...+..++...|..|..||-.. .+...
T Consensus 247 k~Vl~v~F~-engdvi-TgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~e 324 (626)
T KOG2106|consen 247 KFVLCVTFL-ENGDVI-TGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETE 324 (626)
T ss_pred eEEEEEEEc-CCCCEE-eecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEecccccccccccc
Confidence 448899999 887765 9999999999994 45667777777777788877888999998332 22233
Q ss_pred cC---CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 102 FP---LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 102 ~~---~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.| ..++.++=.. +. |+.|...+.|.-=.++. .......+|......++.+|+.. ++++++.|+.++||+
T Consensus 325 lPe~~G~iRtv~e~~--~d-i~vGTtrN~iL~Gt~~~----~f~~~v~gh~delwgla~hps~~-q~~T~gqdk~v~lW~ 396 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGK--GD-ILVGTTRNFILQGTLEN----GFTLTVQGHGDELWGLATHPSKN-QLLTCGQDKHVRLWN 396 (626)
T ss_pred CchhcCCeeEEecCC--Cc-EEEeeccceEEEeeecC----CceEEEEecccceeeEEcCCChh-heeeccCcceEEEcc
Confidence 33 3455555433 33 67788888877767762 33345568999999999999988 599999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
. .++..+ +....++.|+.|+|.| .+|.|...|...+.|.++... +..... +.++++++|
T Consensus 397 --~-~k~~wt-~~~~d~~~~~~fhpsg--~va~Gt~~G~w~V~d~e~~~l--------------v~~~~d-~~~ls~v~y 455 (626)
T KOG2106|consen 397 --D-HKLEWT-KIIEDPAECADFHPSG--VVAVGTATGRWFVLDTETQDL--------------VTIHTD-NEQLSVVRY 455 (626)
T ss_pred --C-CceeEE-EEecCceeEeeccCcc--eEEEeeccceEEEEeccccee--------------EEEEec-CCceEEEEE
Confidence 2 222332 2356889999999999 499999999999999988422 222333 789999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
+|+|. +||.|+.|+.|++|-+............- +......+.||+|++++.+.+.|-.+-.|
T Consensus 456 sp~G~-~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~-~gs~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 456 SPDGA-FLAVGSHDNHIYIYRVSANGRKYSRVGKC-SGSPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred cCCCC-EEEEecCCCeEEEEEECCCCcEEEEeeee-cCceeEEeeecCCCceEEeccCceEEEEE
Confidence 99999 89999999999999998765443332211 22455667999999999999988874333
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.1e-19 Score=150.28 Aligned_cols=219 Identities=20% Similarity=0.322 Sum_probs=176.5
Q ss_pred eeEEEEee------CCCcceEEEeeccCceEeeecCCCc----------------eeEEEecCCCCeEEEecCceEEEEE
Q psy4571 36 RFYRLCVA------EPFDDAVEERVINEEYKIWKKNTPF----------------LYDLVVNNYVANISCILNISILFFE 93 (437)
Q Consensus 36 ~v~~~~~~------~~~~~~l~tgs~d~~v~iw~~~~~~----------------~~~~~~~~~~~~i~~~~~~~i~~~~ 93 (437)
-||..|+- -|+..++++.+.|.-|++||.-+|. .+.+.|+++++.+.|+....|++||
T Consensus 106 tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFd 185 (406)
T KOG2919|consen 106 TVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFD 185 (406)
T ss_pred EEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEee
Confidence 35665554 3778899999999999999966544 5678889999999999999999999
Q ss_pred eee-ccc-----------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 94 IIF-TQN-----------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 94 ~~~-~~~-----------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
... +.. +....-+.|++|+|.+...++.|+....+-||.-. ...++..+.+|.+.|+.+.|.++|
T Consensus 186 t~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~---~~~pl~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 186 TSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD---GRRPLQLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred ccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecC---CCCceeeecccCCCeeeEEeccCc
Confidence 732 222 12244678999999888899999999999999877 568888999999999999999999
Q ss_pred CcEEEEEeC-CCeEEEEeCCCCceeeeEeccCCC-ceEEE--EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSA-DKTVALWDLRNLKLKLHSFESHKD-EIFQV--QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~-dg~i~lwd~~~~~~~~~~~~~h~~-~v~~v--~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.+ |.+|+. |-.|..||++..+.++..+..|.+ .-..| ...|+++ +|++|+.||.|++||+......
T Consensus 263 n~-lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~-~LasG~tdG~V~vwdlk~~gn~-------- 332 (406)
T KOG2919|consen 263 NK-LFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGE-ILASGDTDGSVRVWDLKDLGNE-------- 332 (406)
T ss_pred Ce-ecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCc-eeeccCCCccEEEEecCCCCCc--------
Confidence 97 777765 788999999988887888877766 33444 4468888 6999999999999999984331
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
+..+..|...++.++++|--+ ++++++...
T Consensus 333 -----~sv~~~~sd~vNgvslnP~mp-ilatssGqr 362 (406)
T KOG2919|consen 333 -----VSVTGNYSDTVNGVSLNPIMP-ILATSSGQR 362 (406)
T ss_pred -----ccccccccccccceecCcccc-eeeeccCce
Confidence 223567888999999999988 887877553
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=157.09 Aligned_cols=204 Identities=15% Similarity=0.291 Sum_probs=161.1
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
|..+|.+++|+|.++..+|+|+.|.+|.||.+..+. ..+++..+.+|...|--++|+|...++|++++.|.+|.+|
T Consensus 80 Ht~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iW 159 (472)
T KOG0303|consen 80 HTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIW 159 (472)
T ss_pred ccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEE
Confidence 567899999999999999999999999999986542 3456788999999999999999999999999999999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc-cEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-KISDF 256 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l 256 (437)
|+.+++. +.++. |.+-|+++.|+-+|. +|++.+.|..|+|||.+++..+.+ ..+|.+ .-..+
T Consensus 160 nv~tgea-li~l~-hpd~i~S~sfn~dGs-~l~TtckDKkvRv~dpr~~~~v~e--------------~~~heG~k~~Ra 222 (472)
T KOG0303|consen 160 NVGTGEA-LITLD-HPDMVYSMSFNRDGS-LLCTTCKDKKVRVIDPRRGTVVSE--------------GVAHEGAKPARA 222 (472)
T ss_pred eccCCce-eeecC-CCCeEEEEEeccCCc-eeeeecccceeEEEcCCCCcEeee--------------cccccCCCccee
Confidence 9999776 55666 999999999999998 599999999999999999865544 345543 23455
Q ss_pred EEccCCCeEEEEE---eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc-CCCCcccccc
Q psy4571 257 SWNPNEPWVICSV---SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE-SPTPTNSVHE 324 (437)
Q Consensus 257 ~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~-s~d~~~~~~~ 324 (437)
.|-.+|. ++.|| -.+..+-+||..+.+.--.+.. .-..+++...-+.||.+.+..+ -.|+.++.++
T Consensus 223 ifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~e-lDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyE 292 (472)
T KOG0303|consen 223 IFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQE-LDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFE 292 (472)
T ss_pred EEeccCc-eeeeccccccccceeccCcccccCcceeEE-eccCCceEEeeecCCCCEEEEEecCCcceEEEE
Confidence 6777887 66555 3688999999887644322221 1135566666888988877655 4677755553
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=149.98 Aligned_cols=281 Identities=15% Similarity=0.179 Sum_probs=195.1
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee-------
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH------- 112 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s------- 112 (437)
+.|+ |++.-|++-+.|..+++|+........-+ ..... ......-++.....|.+.+|.
T Consensus 55 ckWS-PDGSciL~~sedn~l~~~nlP~dlys~~~----~~~~~---------~~~~~~~r~~eg~tvydy~wYs~M~s~q 120 (406)
T KOG2919|consen 55 CKWS-PDGSCILSLSEDNCLNCWNLPFDLYSKKA----DGPLN---------FSKHLSYRYQEGETVYDYCWYSRMKSDQ 120 (406)
T ss_pred ceeC-CCCceEEeecccCeeeEEecChhhcccCC----CCccc---------cccceeEEeccCCEEEEEEeeeccccCC
Confidence 4455 88999999999999999985322211100 00000 000011122334456666665
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--cCCC---CeEEEEEeCCCCcEEEEEeCCCeEEEEeC-CCCcee-
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTA---EVNCLSFNPYSEYILATGSADKTVALWDL-RNLKLK- 185 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~---~v~~l~~~~~~~~~l~sgs~dg~i~lwd~-~~~~~~- 185 (437)
| +.+++|+.+.+.-|++||.-+++ ....+. .|.. ...+++|+|||.+ |++| ....|+++|+ +.++.+
T Consensus 121 P-~t~l~a~ssr~~PIh~wdaftG~---lraSy~~ydh~de~taAhsL~Fs~DGeq-lfaG-ykrcirvFdt~RpGr~c~ 194 (406)
T KOG2919|consen 121 P-STNLFAVSSRDQPIHLWDAFTGK---LRASYRAYDHQDEYTAAHSLQFSPDGEQ-LFAG-YKRCIRVFDTSRPGRDCP 194 (406)
T ss_pred C-ccceeeeccccCceeeeeccccc---cccchhhhhhHHhhhhheeEEecCCCCe-Eeec-ccceEEEeeccCCCCCCc
Confidence 4 56799999999999999998553 333332 2322 3568999999996 6555 5678999999 544432
Q ss_pred eeEec-----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 186 LHSFE-----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 186 ~~~~~-----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
..... +..+-+.+++|+|.....++.|+...++-||.-... .+++.+.+|.+.|+.+.|++
T Consensus 195 vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~--------------~pl~llggh~gGvThL~~~e 260 (406)
T KOG2919|consen 195 VYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR--------------RPLQLLGGHGGGVTHLQWCE 260 (406)
T ss_pred chhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCC--------------CceeeecccCCCeeeEEecc
Confidence 22222 236778999999998878999999999888876664 44666889999999999999
Q ss_pred CCCeEEEEEe-CCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 261 NEPWVICSVS-EDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 261 ~~~~~l~s~~-~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+.++ +|+ .|..|-.||++..+. +..+..+....+..+.....|+|++|++|+.+|. |++||+..
T Consensus 261 dGn~lf-sGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~-----------V~vwdlk~ 328 (406)
T KOG2919|consen 261 DGNKLF-SGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGS-----------VRVWDLKD 328 (406)
T ss_pred CcCeec-ccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCcc-----------EEEEecCC
Confidence 999555 554 688999999987543 3333322222334455577999999999999999 89999988
Q ss_pred -hhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 339 -CEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 339 -~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
|..+..+..|.+.++.+.++|.-..+++
T Consensus 329 ~gn~~sv~~~~sd~vNgvslnP~mpilat 357 (406)
T KOG2919|consen 329 LGNEVSVTGNYSDTVNGVSLNPIMPILAT 357 (406)
T ss_pred CCCcccccccccccccceecCcccceeee
Confidence 8888889999999999998887443333
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=160.11 Aligned_cols=266 Identities=15% Similarity=0.224 Sum_probs=191.9
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc----------eeEEEecCCCCe--EEEecCceEEEEEeee----
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVAN--ISCILNISILFFEIIF---- 96 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~--i~~~~~~~i~~~~~~~---- 96 (437)
+.-.|.++... |.+..|++|+.||++|||...++. +..++|++.... +++.....+.+.+...
T Consensus 399 Htg~Vr~iSvd-p~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~ 477 (733)
T KOG0650|consen 399 HTGLVRSISVD-PSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRL 477 (733)
T ss_pred cCCeEEEEEec-CCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccchh
Confidence 44567888888 899999999999999999976654 455666555432 2222222233322110
Q ss_pred -----------------------------------c--cccccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCC
Q psy4571 97 -----------------------------------T--QNFPFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSH 136 (437)
Q Consensus 97 -----------------------------------~--~~~~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~ 136 (437)
+ ..+.+..+|+.+.|+. .|.+|++...+ ..|.|+++...
T Consensus 478 e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHr-kGDYlatV~~~~~~~~VliHQLSK~ 556 (733)
T KOG0650|consen 478 EVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHR-KGDYLATVMPDSGNKSVLIHQLSKR 556 (733)
T ss_pred hhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeec-CCceEEEeccCCCcceEEEEecccc
Confidence 0 1233566889999999 68899887664 46889999854
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
..+. -|....+.|.++.|+|...+ |++++. ..|++||+.... .+..+......|..++.+|.|.+ |+.|+.|+
T Consensus 557 ~sQ~---PF~kskG~vq~v~FHPs~p~-lfVaTq-~~vRiYdL~kqe-lvKkL~tg~kwiS~msihp~GDn-li~gs~d~ 629 (733)
T KOG0650|consen 557 KSQS---PFRKSKGLVQRVKFHPSKPY-LFVATQ-RSVRIYDLSKQE-LVKKLLTGSKWISSMSIHPNGDN-LILGSYDK 629 (733)
T ss_pred cccC---chhhcCCceeEEEecCCCce-EEEEec-cceEEEehhHHH-HHHHHhcCCeeeeeeeecCCCCe-EEEecCCC
Confidence 3333 34344667999999999997 666654 579999999833 36666666778999999999997 78999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC------CCCCce---
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS------TDSDTK--- 287 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~------~~~~~~--- 287 (437)
.++++|+.-...+ ..++.-|...+++|+|++.-+ ++++|+.||++.|+.-. ....+.
T Consensus 630 k~~WfDldlsskP-------------yk~lr~H~~avr~Va~H~ryP-Lfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK 695 (733)
T KOG0650|consen 630 KMCWFDLDLSSKP-------------YKTLRLHEKAVRSVAFHKRYP-LFASGSDDGTVIVFHGMVYNDLLQNPLIVPLK 695 (733)
T ss_pred eeEEEEcccCcch-------------hHHhhhhhhhhhhhhhccccc-eeeeecCCCcEEEEeeeeehhhhcCCceEeee
Confidence 9999999876433 344778999999999999999 99999999999999643 222222
Q ss_pred eeeeeec-ccCCceeeeecCCCCcccccCCCCccc
Q psy4571 288 TMRLDSI-RSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 288 ~~~~~~~-~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.+..+.. ...++..+.|+|..-+|++++.|++++
T Consensus 696 ~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tir 730 (733)
T KOG0650|consen 696 RLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIR 730 (733)
T ss_pred eccCceeecccceEeecccCCCceEEecCCCceEE
Confidence 2222211 234567778999999999999999943
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=155.10 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=187.2
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
+...+|+++.|+| ...++++|+.||++++|.++.. ....++.+.--..+|.+.+|.|+|...+++++.......||+.
T Consensus 211 ps~~~I~sv~FHp-~~plllvaG~d~~lrifqvDGk-~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 211 PSHGGITSVQFHP-TAPLLLVAGLDGTLRIFQVDGK-VNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred cCcCCceEEEecC-CCceEEEecCCCcEEEEEecCc-cChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc
Confidence 3457899999999 7889999999999999999743 3455666666678999999999999669999999999999999
Q ss_pred CCcee-eeEeccCC-CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 181 NLKLK-LHSFESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 181 ~~~~~-~~~~~~h~-~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+.+.. +....++. ..+.....+|+++ +++..+..|.|++....++..... + .-.+.|..+.|
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s--------------~-KieG~v~~~~f 352 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITS--------------F-KIEGVVSDFTF 352 (514)
T ss_pred ccccccccCCCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhhe--------------e-eeccEEeeEEE
Confidence 86531 22233333 3467788899998 588999999999998888654333 2 23568999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+.+++ .|++++.+|.|.+||++...++..+.... .....+.+.|++|.++|+|+..|.+.+|+.+ ....-.+
T Consensus 353 sSdsk-~l~~~~~~GeV~v~nl~~~~~~~rf~D~G--~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~-----s~~~s~~ 424 (514)
T KOG2055|consen 353 SSDSK-ELLASGGTGEVYVWNLRQNSCLHRFVDDG--SVHGTSLCISLNGSYLATGSDSGIVNIYDGN-----SCFASTN 424 (514)
T ss_pred ecCCc-EEEEEcCCceEEEEecCCcceEEEEeecC--ccceeeeeecCCCceEEeccCcceEEEeccc-----hhhccCC
Confidence 99998 56677788999999999998888776432 2345566889999999999999996555433 2223345
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+.+..+......++.+.|+++...++.+
T Consensus 425 PkPik~~dNLtt~Itsl~Fn~d~qiLAia 453 (514)
T KOG2055|consen 425 PKPIKTVDNLTTAITSLQFNHDAQILAIA 453 (514)
T ss_pred CCchhhhhhhheeeeeeeeCcchhhhhhh
Confidence 66778888888889999999999876654
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-19 Score=150.85 Aligned_cols=221 Identities=20% Similarity=0.235 Sum_probs=154.2
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---ccCCCceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
+..+++|.+.|++++|+.||++ |++++.|++|++|+++........+ .---+..+.++|.||.+.++++.-...++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~-lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKK-LATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCCce-eEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 4577899999999999999997 9999999999999998743211111 11123568899999998877787778889
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
++|.+.....-.- ..+..+..-+...+.|...+-.+-....+. ++++++.|..|.+|++. |+.++.+.. ....
T Consensus 158 ~vyk~~K~~dG~~--~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k-~imsas~dt~i~lw~lk-Gq~L~~idt---nq~~ 230 (420)
T KOG2096|consen 158 CVYKLVKKTDGSG--SHHFVHIDNLEFERKHQVDIINIGIAGNAK-YIMSASLDTKICLWDLK-GQLLQSIDT---NQSS 230 (420)
T ss_pred EEEEeeecccCCC--CcccccccccccchhcccceEEEeecCCce-EEEEecCCCcEEEEecC-Cceeeeecc---cccc
Confidence 9998865432110 000111111222345666676676666667 88899999999999999 778877765 3455
Q ss_pred ceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------cccc
Q psy4571 299 GISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~ 371 (437)
...++.||+|+++++++....+++|+.-+.+.-. ...-+.+..++||...|..++|+++.....+. +|++
T Consensus 231 n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~---fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdt 307 (420)
T KOG2096|consen 231 NYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGT---FQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDT 307 (420)
T ss_pred ccceeeCCCCcEEEEecCCCCceEEEEEeccCcc---hhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeec
Confidence 6678999999999999988875444332211100 01112334569999999999999998876654 7776
Q ss_pred CH
Q psy4571 372 TD 373 (437)
Q Consensus 372 ~~ 373 (437)
+-
T Consensus 308 dV 309 (420)
T KOG2096|consen 308 DV 309 (420)
T ss_pred cc
Confidence 43
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=147.93 Aligned_cols=269 Identities=16% Similarity=0.184 Sum_probs=184.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
|..-.|+.+.|..-....++||+.|..||+|..+.+..-.- . ..|.... .--.+..+|+++.|
T Consensus 11 H~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~-----~--------~~V~y~s----~Ls~H~~aVN~vRf 73 (434)
T KOG1009|consen 11 HDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGG-----D--------MKVEYLS----SLSRHTRAVNVVRF 73 (434)
T ss_pred cCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCC-----c--------eeEEEee----cccCCcceeEEEEE
Confidence 46677899999944444999999999999999653221100 0 0110000 01135678999999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcC--------C-----CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTR--------S-----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~--------~-----~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
+| ++.+||+|+.+|.|.+|... + .+.....+.+.+|...|..++|+|++.+ +++|+.|.++++||
T Consensus 74 ~p-~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~-l~s~s~dns~~l~D 151 (434)
T KOG1009|consen 74 SP-DGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNF-LVSGSVDNSVRLWD 151 (434)
T ss_pred cC-CcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCce-eeeeeccceEEEEE
Confidence 99 78999999999999999876 1 1112344667789999999999999996 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC------------------------
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED------------------------ 234 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~------------------------ 234 (437)
+..+.. ...+.+|..-|..++|.|-+++ +++-+.|...+++.+...........
T Consensus 152 v~~G~l-~~~~~dh~~yvqgvawDpl~qy-v~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTl 229 (434)
T KOG1009|consen 152 VHAGQL-LAILDDHEHYVQGVAWDPLNQY-VASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETL 229 (434)
T ss_pred ecccee-Eeeccccccccceeecchhhhh-hhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCch
Confidence 999776 8888899999999999999886 77877787666665543322111110
Q ss_pred ---------C---------------CC-------------CCCceEEEecCccccEEEEEEccC----------------
Q psy4571 235 ---------A---------------ED-------------GPPELLFIHGGHTAKISDFSWNPN---------------- 261 (437)
Q Consensus 235 ---------~---------------~~-------------~~~~~~~~~~~h~~~v~~l~~~p~---------------- 261 (437)
. .. ...+++..+.+-..++..+.|+|-
T Consensus 230 ksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~l 309 (434)
T KOG1009|consen 230 KSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVL 309 (434)
T ss_pred hhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEecccccccccccc
Confidence 0 00 000122222333344555555541
Q ss_pred -CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 262 -EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 262 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.+..++.+ ..+.+++||.++..++.... ..|-......+|++||..++..|.||.+++..
T Consensus 310 pyrlvfaiA-t~~svyvydtq~~~P~~~v~--nihy~~iTDiaws~dg~~l~vSS~DGyCS~vt 370 (434)
T KOG1009|consen 310 PYRLVFAIA-TKNSVYVYDTQTLEPLAVVD--NIHYSAITDIAWSDDGSVLLVSSTDGFCSLVT 370 (434)
T ss_pred ccceEEEEe-ecceEEEeccccccceEEEe--eeeeeeecceeecCCCcEEEEeccCCceEEEE
Confidence 12133334 44579999998876665443 23445667789999999999999999976553
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=161.18 Aligned_cols=222 Identities=21% Similarity=0.326 Sum_probs=164.0
Q ss_pred cCceEEEEEeeecccccc--------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC----CCCeeeeccCCCCe
Q psy4571 85 LNISILFFEIIFTQNFPF--------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV----SKPSHTVDAHTAEV 152 (437)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~--------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~h~~~v 152 (437)
..|.|-|+++....+++. ...|++++|.|.+...||+++.||.|++|.+..++. ..+...+.+|...|
T Consensus 601 ~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI 680 (1012)
T KOG1445|consen 601 SGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKI 680 (1012)
T ss_pred CCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceE
Confidence 467899999876555442 357899999999999999999999999999976542 23556778999999
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
+++.|+|-...+|++++.|-+|++||+++++. ...+.+|.+.|..++|+|+|+ .+|+.+.||+|+||+.+.......
T Consensus 681 ~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~-~~~l~gHtdqIf~~AWSpdGr-~~AtVcKDg~~rVy~Prs~e~pv~- 757 (1012)
T KOG1445|consen 681 TSLRFHPLAADVLAVASYDSTIELWDLANAKL-YSRLVGHTDQIFGIAWSPDGR-RIATVCKDGTLRVYEPRSREQPVY- 757 (1012)
T ss_pred EEEEecchhhhHhhhhhccceeeeeehhhhhh-hheeccCcCceeEEEECCCCc-ceeeeecCceEEEeCCCCCCCccc-
Confidence 99999998877899999999999999999776 778889999999999999999 599999999999999988653221
Q ss_pred CCCCCCCCceEEEecCc-cccEEEEEEccCCCeEEEEE---eCCCeEEEEeCCCCC--CceeeeeeecccCCceeeeecC
Q psy4571 233 EDAEDGPPELLFIHGGH-TAKISDFSWNPNEPWVICSV---SEDNIMQEYCDSTDS--DTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~~~~~l~s~---~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
.-++. ...--.|.|..+|+.++++| +....|.+||.++-. .+.+..+.. ........+.+
T Consensus 758 ------------Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDv--aps~LvP~YD~ 823 (1012)
T KOG1445|consen 758 ------------EGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDV--APSPLVPHYDY 823 (1012)
T ss_pred ------------cCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecc--cCccccccccC
Confidence 11111 12234577888999666555 345678899887643 233322211 11122224556
Q ss_pred CCC-cccccCCCCccccc
Q psy4571 307 TAS-STASESPTPTNSVH 323 (437)
Q Consensus 307 ~g~-~l~s~s~d~~~~~~ 323 (437)
|.. ++++|-.|..+..+
T Consensus 824 Ds~~lfltGKGD~~v~~y 841 (1012)
T KOG1445|consen 824 DSNVLFLTGKGDRFVNMY 841 (1012)
T ss_pred CCceEEEecCCCceEEEE
Confidence 655 55677777774443
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-17 Score=157.67 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=189.8
Q ss_pred ceeEEecCCcc------cccceeEEEEeeCCCcceEEEeeccCceEeeec-----------------CCCceeEEEecCC
Q psy4571 21 AFFTWSALPLS------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------------NTPFLYDLVVNNY 77 (437)
Q Consensus 21 ~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------------~~~~~~~~~~~~~ 77 (437)
.+++|+...-. ...-.|.+++|+.-++.+++.|..+|.|-+||. |...+..+.|...
T Consensus 223 ~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~ 302 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN 302 (555)
T ss_pred eEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence 46777766542 335568899999777899999999999999993 2345667777332
Q ss_pred ---CCeEEEecCceEEEEEeeecc----------------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC
Q psy4571 78 ---VANISCILNISILFFEIIFTQ----------------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV 138 (437)
Q Consensus 78 ---~~~i~~~~~~~i~~~~~~~~~----------------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~ 138 (437)
.+.++++.||.|..|+..... ...-...+++++|.|.+...|++|+.+|.|..-+-.....
T Consensus 303 ~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~ 382 (555)
T KOG1587|consen 303 EHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTP 382 (555)
T ss_pred CCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcc
Confidence 346788899999999854211 1122347889999999999999999999988733332111
Q ss_pred -C----CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 139 -S----KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 139 -~----~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
. +....+..|.++|.++.++|-+..++++++ |.+++||.......++..+..+...|++++|||..+.+|+++.
T Consensus 383 ~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d 461 (555)
T KOG1587|consen 383 APEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVD 461 (555)
T ss_pred cccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEc
Confidence 1 224456678999999999999997666666 9999999998546668888888888999999999999999999
Q ss_pred CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.||.|.+||+....... +....-+....+.+.|++.|+ +++.|...|.+.+|++..
T Consensus 462 ~~G~l~iWDLl~~~~~P------------v~s~~~~~~~l~~~~~s~~g~-~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 462 GDGNLDIWDLLQDDEEP------------VLSQKVCSPALTRVRWSPNGK-LLAVGDANGTTHILKLSE 517 (555)
T ss_pred CCCceehhhhhccccCC------------cccccccccccceeecCCCCc-EEEEecCCCcEEEEEcCc
Confidence 99999999998754322 222333355677888999999 899999999999999974
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=150.19 Aligned_cols=183 Identities=15% Similarity=0.285 Sum_probs=141.2
Q ss_pred CCCEEEEE---ECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC------ce
Q psy4571 115 HESLFGSV---ADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL------KL 184 (437)
Q Consensus 115 ~~~~l~~~---~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~------~~ 184 (437)
+..++|.. +..|...+.-+.. +......-.+.+|+++|..++|+|.+.+.|||||+|.+|.||++-.+ ..
T Consensus 43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lte 122 (472)
T KOG0303|consen 43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTE 122 (472)
T ss_pred CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCccc
Confidence 44555432 3344555554432 11233445667999999999999999889999999999999998643 34
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
++..+.+|...|..++|+|.-.++|++++.|.+|.+|++.++.... .+. |.+.|.+++|+.+|.
T Consensus 123 pvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali--------------~l~-hpd~i~S~sfn~dGs- 186 (472)
T KOG0303|consen 123 PVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALI--------------TLD-HPDMVYSMSFNRDGS- 186 (472)
T ss_pred ceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceee--------------ecC-CCCeEEEEEeccCCc-
Confidence 5778899999999999999988899999999999999999975433 344 999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+++|.+.|..|+|||.++++.+..-..+ .......+.|-.+|.++.+|-
T Consensus 187 ~l~TtckDKkvRv~dpr~~~~v~e~~~h--eG~k~~Raifl~~g~i~tTGf 235 (472)
T KOG0303|consen 187 LLCTTCKDKKVRVIDPRRGTVVSEGVAH--EGAKPARAIFLASGKIFTTGF 235 (472)
T ss_pred eeeeecccceeEEEcCCCCcEeeecccc--cCCCcceeEEeccCceeeecc
Confidence 8999999999999999999877655321 223345567888888555553
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=141.28 Aligned_cols=228 Identities=19% Similarity=0.302 Sum_probs=171.5
Q ss_pred ccccceeEEEEeeCCCc-----ceEEEeeccCceEeeecC--------------------CCceeEEEecCCCCe-E-EE
Q psy4571 31 SHSIYRFYRLCVAEPFD-----DAVEERVINEEYKIWKKN--------------------TPFLYDLVVNNYVAN-I-SC 83 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~-----~~l~tgs~d~~v~iw~~~--------------------~~~~~~~~~~~~~~~-i-~~ 83 (437)
-..+|.+..+.|. |+. ++|||.+ ..+|+|+.. +..+.++.|+..... + ++
T Consensus 93 fd~~YP~tK~~wi-Pd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtS 169 (364)
T KOG0290|consen 93 FDHPYPVTKLMWI-PDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTS 169 (364)
T ss_pred CCCCCCccceEec-CCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEee
Confidence 3568899999998 654 5777764 358999943 233555555444333 3 66
Q ss_pred ecCceEEEEEeeec-------cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 84 ILNISILFFEIIFT-------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 84 ~~~~~i~~~~~~~~-------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
+-|.+-.+||+..+ |-+.|...|.+++|...+.++||+.+.||.||++|++..+....+..-.....+...++
T Consensus 170 SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLs 249 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLS 249 (364)
T ss_pred cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeec
Confidence 78899999998764 34678899999999997778999999999999999996544444433333356789999
Q ss_pred EeCCCCcEEEEEeCC-CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSAD-KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 ~~~~~~~~l~sgs~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
|+++..+.+|+-..| ..|.+.|++....++..+++|++.|+.++|.|.....++|++.|..+.+||+........
T Consensus 250 wnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~---- 325 (364)
T KOG0290|consen 250 WNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENG---- 325 (364)
T ss_pred cCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCC----
Confidence 999888777776655 459999999999999999999999999999998877899999999999999987643111
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
..++..+. -.+.|+.+.|+|..+..++.+.
T Consensus 326 ----~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 326 ----EDPILAYT-AGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred ----CCchhhhh-ccceeeeeeecccCCCEEEEEe
Confidence 01122222 3568999999987765665554
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.3e-18 Score=151.99 Aligned_cols=209 Identities=17% Similarity=0.296 Sum_probs=161.9
Q ss_pred CCeEEEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCe
Q psy4571 78 VANISCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEV 152 (437)
Q Consensus 78 ~~~i~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v 152 (437)
...++.+..+.|+|||++.... ..+...|+++.++. .+.+||+++..|.|.|..+.+.. ....+... ...|
T Consensus 92 ~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~---~tt~f~~~sgqsv 167 (673)
T KOG4378|consen 92 LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQ---KTTTFTIDSGQSV 167 (673)
T ss_pred eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecC-CcceeEEeccCCcEEEEecccCc---cccceecCCCCeE
Confidence 3445666778899999774332 23567899999998 67899999999999999998543 23333322 3356
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.-+.|+|..+++|.+++.+|.|.+||+............|..+...|+|+|.++.+|++-+.|..|.+||.+.......
T Consensus 168 Rll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~- 246 (673)
T KOG4378|consen 168 RLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDR- 246 (673)
T ss_pred EEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccce-
Confidence 6899999999999999999999999999866545566789999999999999998999999999999999986543332
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
+ ....+.+.++|.++|- +|+.|...|.|..||++..+.... ....|...+.+++|-|.-
T Consensus 247 -------------l-~y~~Plstvaf~~~G~-~L~aG~s~G~~i~YD~R~~k~Pv~--v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 247 -------------L-TYSHPLSTVAFSECGT-YLCAGNSKGELIAYDMRSTKAPVA--VRSAHDASVTRVAFQPSP 305 (673)
T ss_pred -------------e-eecCCcceeeecCCce-EEEeecCCceEEEEecccCCCCce--EeeecccceeEEEeeecc
Confidence 1 2345789999999999 888999999999999997654322 223355667777886653
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-17 Score=138.06 Aligned_cols=201 Identities=18% Similarity=0.267 Sum_probs=149.9
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC-CCe--eeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS-KPS--HTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALWD 178 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~--~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd 178 (437)
..+.|+.|.| ++..+++-. |..|.+|++...... ..+ ..-.+|....++-+|+| ++. -+....|+++..||
T Consensus 124 g~i~cvew~P-ns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgn--qv~tt~d~tl~~~D 199 (370)
T KOG1007|consen 124 GKINCVEWEP-NSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGN--QVATTSDSTLQFWD 199 (370)
T ss_pred CceeeEEEcC-CCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccc--eEEEeCCCcEEEEE
Confidence 3789999999 666666544 889999999854321 111 11123556788899998 444 34445689999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+++.++....-.+|...|..+.|+|+.+++|++|+.||.|++||.+..+ .+++.+.+|...|.++.|
T Consensus 200 ~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk-------------~pv~el~~HsHWvW~VRf 266 (370)
T KOG1007|consen 200 LRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK-------------FPVQELPGHSHWVWAVRF 266 (370)
T ss_pred ccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-------------ccccccCCCceEEEEEEe
Confidence 9997775555568889999999999999999999999999999999854 455668899999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCcee--------------------------eeeeecccCCceeeeecCCC-Ccc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKT--------------------------MRLDSIRSNGGISSTASPTA-SST 311 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~s~~g-~~l 311 (437)
+|....++.+|+.|..|.+|....-...+. +....-+...+..++||.-. -++
T Consensus 267 n~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiF 346 (370)
T KOG1007|consen 267 NPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIF 346 (370)
T ss_pred cCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeE
Confidence 998877999999999999998653221111 11222355677788886544 466
Q ss_pred cccCCCCccc
Q psy4571 312 ASESPTPTNS 321 (437)
Q Consensus 312 ~s~s~d~~~~ 321 (437)
|+-+.||.+.
T Consensus 347 ASLSYDGRvi 356 (370)
T KOG1007|consen 347 ASLSYDGRVI 356 (370)
T ss_pred EEeccCceEE
Confidence 7778888753
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=152.47 Aligned_cols=230 Identities=19% Similarity=0.283 Sum_probs=172.7
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-----CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-----~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+-..++.++|+| ....|++++.||++.+|+++. ....+++.++.+|.++|.|++..+.+.+ +++|+.||+|+.
T Consensus 293 ~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~-~ysgg~Dg~I~~ 370 (577)
T KOG0642|consen 293 HDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEH-CYSGGIDGTIRC 370 (577)
T ss_pred chhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceE-EEeeccCceeee
Confidence 345778899999 577899999999999999932 1235678899999999999999999996 999999999999
Q ss_pred EeCCCCc---------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC-------
Q psy4571 177 WDLRNLK---------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP------- 240 (437)
Q Consensus 177 wd~~~~~---------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~------- 240 (437)
|++.... .....+.+|.+.|..+++++...+ |++++.||+++.|+.......-.......+-+
T Consensus 371 w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~-Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~s 449 (577)
T KOG0642|consen 371 WNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDR-LLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTS 449 (577)
T ss_pred eccCCCCCcccccCcchhccceeccccceeeeeecccccc-eeeecCCceEEeeccCCcCccccCCccccCCcceEeecc
Confidence 9654211 223467799999999999998875 88999999999999877655111000000000
Q ss_pred -------------------------ceEEEecC-----ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 241 -------------------------ELLFIHGG-----HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 241 -------------------------~~~~~~~~-----h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
..++.... ....+..+.++|.+. +.+++..|+.|+++|..+++.+....
T Consensus 450 s~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~-~~~~~hed~~Ir~~dn~~~~~l~s~~ 528 (577)
T KOG0642|consen 450 SRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTAD-ITFTAHEDRSIRFFDNKTGKILHSMV 528 (577)
T ss_pred chhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCC-eeEecccCCceecccccccccchhee
Confidence 00000000 113467788899998 78899999999999999998887766
Q ss_pred eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 291 LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
. +...+.+.++.|+|-+|.+++.|+. +++|.+....++.....|.
T Consensus 529 a---~~~svtslai~~ng~~l~s~s~d~s-----------v~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 529 A---HKDSVTSLAIDPNGPYLMSGSHDGS-----------VRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred e---ccceecceeecCCCceEEeecCCce-----------eehhhccchheeecccccc
Confidence 5 5577788899999999999999999 6777776555554444443
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-18 Score=165.18 Aligned_cols=239 Identities=18% Similarity=0.213 Sum_probs=175.6
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
..+...|||+.|. ..+..++||+.|..+|||..+++.+.+.. ..+...+++++
T Consensus 187 lgH~naVyca~fD-rtg~~Iitgsdd~lvKiwS~et~~~lAs~--------------------------rGhs~ditdla 239 (1113)
T KOG0644|consen 187 LGHRNAVYCAIFD-RTGRYIITGSDDRLVKIWSMETARCLASC--------------------------RGHSGDITDLA 239 (1113)
T ss_pred Hhhhhheeeeeec-cccceEeecCccceeeeeeccchhhhccC--------------------------CCCccccchhc
Confidence 3445569999999 99999999999999999999887765432 12335567888
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE--
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-- 188 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-- 188 (437)
.+. +..++++++.|..|++|.+. ...++..+.+|++.|++|+|+|- .+.+.||++++||.+-... ...
T Consensus 240 vs~-~n~~iaaaS~D~vIrvWrl~---~~~pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~-~y~pr 309 (1113)
T KOG0644|consen 240 VSS-NNTMIAAASNDKVIRVWRLP---DGAPVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPR-IYVPR 309 (1113)
T ss_pred cch-hhhhhhhcccCceEEEEecC---CCchHHHHhccccceeeeccCcc-----ccCCCCCceEecccccccc-ccCCC
Confidence 877 67889999999999999999 67889999999999999999984 4778999999999982110 000
Q ss_pred -ec-cCCCceEEEEEcCCCCc------------------------------------EEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 189 -FE-SHKDEIFQVQWSPHNET------------------------------------ILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 189 -~~-~h~~~v~~v~~~p~~~~------------------------------------~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
+. ....-+.++.|...+.. +.+++-.+-.+++|++.++..
T Consensus 310 p~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l-- 387 (1113)
T KOG0644|consen 310 PLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL-- 387 (1113)
T ss_pred CCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchh--
Confidence 00 00112222222222221 223333344566666665533
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
++...+|...+..+.++|-+..+..+++.||...|||+-.|.+++.+.. .+.......||+||+.
T Consensus 388 ------------~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~---gh~kl~d~kFSqdgts 452 (1113)
T KOG0644|consen 388 ------------LHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFI---GHGKLVDGKFSQDGTS 452 (1113)
T ss_pred ------------hhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeec---ccceeeccccCCCCce
Confidence 3346789999999999999988889999999999999999999888873 3556677799999998
Q ss_pred ccccCCCCccccc
Q psy4571 311 TASESPTPTNSVH 323 (437)
Q Consensus 311 l~s~s~d~~~~~~ 323 (437)
++....-|.+.+.
T Consensus 453 ~~lsd~hgql~i~ 465 (1113)
T KOG0644|consen 453 IALSDDHGQLYIL 465 (1113)
T ss_pred EecCCCCCceEEe
Confidence 8877766665444
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.1e-18 Score=148.99 Aligned_cols=197 Identities=21% Similarity=0.349 Sum_probs=151.7
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC------CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK------PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~------~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
.+.++..+.|.+...+.+++|+.|..|++|.+....... ....+..|...|+++.|+|+|. +|+||+.+|.|.
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-lLASg~D~g~v~ 90 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-LLASGGDGGEVF 90 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-eeeecCCCceEE
Confidence 456888999999666699999999999999987543333 3456778999999999999999 699999999999
Q ss_pred EEeCC--------C-----C--ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 176 LWDLR--------N-----L--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 176 lwd~~--------~-----~--~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
+|-.. + . -.....+.+|...|+.++|+|++. ++++|+.|..+++||+..+..
T Consensus 91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~-~l~s~s~dns~~l~Dv~~G~l------------ 157 (434)
T KOG1009|consen 91 LWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN-FLVSGSVDNSVRLWDVHAGQL------------ 157 (434)
T ss_pred EEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc-eeeeeeccceEEEEEecccee------------
Confidence 99765 2 1 112345678999999999999998 599999999999999999754
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee----------------ecccC----Cce
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD----------------SIRSN----GGI 300 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~~~----~~~ 300 (437)
+..+.+|...|..++|.|.++ .+++-+.|...+.+++...+.++..... ..+.. -..
T Consensus 158 --~~~~~dh~~yvqgvawDpl~q-yv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFr 234 (434)
T KOG1009|consen 158 --LAILDDHEHYVQGVAWDPLNQ-YVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFR 234 (434)
T ss_pred --Eeeccccccccceeecchhhh-hhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhh
Confidence 445789999999999999999 6888888887777776654433322200 00111 123
Q ss_pred eeeecCCCCcccccC
Q psy4571 301 SSTASPTASSTASES 315 (437)
Q Consensus 301 ~~~~s~~g~~l~s~s 315 (437)
..+|+|+|.++++.+
T Consensus 235 RlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 235 RLSFTPDGSLLVTPA 249 (434)
T ss_pred hcccCCCCcEEEccc
Confidence 358899999888664
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.2e-17 Score=139.78 Aligned_cols=277 Identities=22% Similarity=0.293 Sum_probs=177.8
Q ss_pred ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC-CCCEEEEEECCC
Q psy4571 48 DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL-HESLFGSVADDQ 126 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~-~~~~l~~~~~dg 126 (437)
..++++-.+++||+++..++..+... ...+..++.++|... ....+.+|+.||
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~f--------------------------k~~~~~~N~vrf~~~ds~h~v~s~ssDG 94 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEF--------------------------KGPPATTNGVRFISCDSPHGVISCSSDG 94 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhhee--------------------------cCCCCcccceEEecCCCCCeeEEeccCC
Confidence 55666666777777776665444321 113345667777543 567788999999
Q ss_pred cEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeC----CCeEEEEeCCCCceeeeE-eccCCCceEEEE
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSA----DKTVALWDLRNLKLKLHS-FESHKDEIFQVQ 200 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~----dg~i~lwd~~~~~~~~~~-~~~h~~~v~~v~ 200 (437)
+|++||++..... .......+. .+..|++-+-.+. ++++|++ |-.|.+||+|..+.++.. ...|.+.|++++
T Consensus 95 ~Vr~wD~Rs~~e~-a~~~~~~~~~~~f~~ld~nck~~-ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lr 172 (376)
T KOG1188|consen 95 TVRLWDIRSQAES-ARISWTQQSGTPFICLDLNCKKN-IIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLR 172 (376)
T ss_pred eEEEEEeecchhh-hheeccCCCCCcceEeeccCcCC-eEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEE
Confidence 9999999965432 233344555 4666777664555 6888865 677999999987764444 467999999999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+|..+.+|++||.||.|.+||+....... .+...-.|...|.++.|...+-..+.+-+..++..+|++
T Consensus 173 FHP~~pnlLlSGSvDGLvnlfD~~~d~EeD-----------aL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~el 241 (376)
T KOG1188|consen 173 FHPSDPNLLLSGSVDGLVNLFDTKKDNEED-----------ALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL 241 (376)
T ss_pred ecCCCCCeEEeecccceEEeeecCCCcchh-----------hHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence 999999999999999999999998763222 122234667789999999888224778889999999999
Q ss_pred CCCCCceeeeeeeccc--------CCceeeeecC-CCCcccccCC-CCcccccccccccccccccchhh---hhhhhhcC
Q psy4571 281 STDSDTKTMRLDSIRS--------NGGISSTASP-TASSTASESP-TPTNSVHEKNYWQGLVLFDILVC---EEQRQLLG 347 (437)
Q Consensus 281 ~~~~~~~~~~~~~~~~--------~~~~~~~~s~-~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~~---~~~~~~~~ 347 (437)
+.+.+...+....... ...+.-+.+| ++.+++.++. .+...+ ..+-|..++ +.+..+.|
T Consensus 242 e~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~--------~~~~~~~s~~~~~~~a~l~g 313 (376)
T KOG1188|consen 242 EDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTI--------FPLVDTSSGSLLTEPAILQG 313 (376)
T ss_pred cCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeE--------EEeeecccccccCccccccC
Confidence 9987554443221100 0011112223 3334444443 333221 233333333 34455555
Q ss_pred -CCccccccCCCCCCcccccc-------cccc
Q psy4571 348 -TEEESSDRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 348 -h~~~~~~~~~~~~~~~~~~~-------~w~~ 371 (437)
|.+.|..+.+...+..+.++ +|..
T Consensus 314 ~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 314 GHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred CcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 77777777777655554443 7774
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=155.68 Aligned_cols=239 Identities=18% Similarity=0.194 Sum_probs=172.7
Q ss_pred cceeEEEEee-CCCcceEEEeeccCceEeeecCCC----ce-------------------eEEEecCCCCeEEEec-Cce
Q psy4571 34 IYRFYRLCVA-EPFDDAVEERVINEEYKIWKKNTP----FL-------------------YDLVVNNYVANISCIL-NIS 88 (437)
Q Consensus 34 ~~~v~~~~~~-~~~~~~l~tgs~d~~v~iw~~~~~----~~-------------------~~~~~~~~~~~i~~~~-~~~ 88 (437)
.-+|..+++- ..+..++++|+.||.||||+..-. .- .-+.|....+.+.+++ -..
T Consensus 1109 ~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~ 1188 (1387)
T KOG1517|consen 1109 DTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRS 1188 (1387)
T ss_pred CCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeE
Confidence 4467888754 466788999999999999993211 11 1123334445555555 458
Q ss_pred EEEEEeeeccc---ccc--CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC--eEEEEEeCCC
Q psy4571 89 ILFFEIIFTQN---FPF--PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE--VNCLSFNPYS 161 (437)
Q Consensus 89 i~~~~~~~~~~---~~~--~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~--v~~l~~~~~~ 161 (437)
|+|||....+. ++. ...++++.-+..+++++++|..||.|++||.+-......+...+.|... |..+.+.+.|
T Consensus 1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G 1268 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQG 1268 (1387)
T ss_pred EEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCC
Confidence 99999765443 222 3456667666667899999999999999999866555678888899887 9999999876
Q ss_pred CcEEEEEeCCCeEEEEeCCCC-ceeeeEeccCC--C-ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADKTVALWDLRNL-KLKLHSFESHK--D-EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~-~~~~~~~~~h~--~-~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
-.-|++|+.||.|++||++.. +....+...|- + ..+++..++..+ ++|+|+. +.|+||++...........
T Consensus 1269 ~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hap-iiAsGs~-q~ikIy~~~G~~l~~~k~n--- 1343 (1387)
T KOG1517|consen 1269 LGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAP-IIASGSA-QLIKIYSLSGEQLNIIKYN--- 1343 (1387)
T ss_pred CcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCC-eeeecCc-ceEEEEecChhhhcccccC---
Confidence 655999999999999999983 32222333332 3 589999999998 7999987 9999999987543322110
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+.. .....+.+.|++|+|..- ++++|+.|.+|.||.....
T Consensus 1344 --~~F---~~q~~gs~scL~FHP~~~-llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1344 --PGF---MGQRIGSVSCLAFHPHRL-LLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred --ccc---ccCcCCCcceeeecchhH-hhhhccCCceEEEeecCCc
Confidence 011 112234679999999988 8899999999999987754
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-16 Score=153.41 Aligned_cols=268 Identities=19% Similarity=0.218 Sum_probs=184.5
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc--------------eeEEEecCC--CC-eEEEecCceEEEEEeeecc-
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF--------------LYDLVVNNY--VA-NISCILNISILFFEIIFTQ- 98 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--------------~~~~~~~~~--~~-~i~~~~~~~i~~~~~~~~~- 98 (437)
...+.|+ |..+.++++.....|++||-+.+. +.++.+.+. .+ .++++.||.|++|+-....
T Consensus 1067 pk~~~~h-pf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1067 PKTLKFH-PFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred Cceeeec-CCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence 3446778 999999999888899999954333 333333222 22 3488899999999733221
Q ss_pred -cc-------------ccCCC-cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCC
Q psy4571 99 -NF-------------PFPLS-RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 99 -~~-------------~~~~~-v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~ 162 (437)
+. +.... ---+.|....+ +|++++.-..|+|||.... ..+..+ .+....|+++.-+..+.
T Consensus 1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E---~~~~diP~~s~t~vTaLS~~~~~g 1221 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAHKE---QVVADIPYGSSTLVTALSADLVHG 1221 (1387)
T ss_pred CCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecccc---eeEeecccCCCccceeecccccCC
Confidence 11 11111 13467877545 4455555789999999842 333332 23455678777665554
Q ss_pred cEEEEEeCCCeEEEEeCCCCce--eeeEeccCCCc--eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADKTVALWDLRNLKL--KLHSFESHKDE--IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~--~~~~~~~h~~~--v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
.++++|..||.|++||.+.... .+...+.|+.. |..+.+.++|-.-|++|+.||.|++||++.......
T Consensus 1222 n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~------- 1294 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETF------- 1294 (1387)
T ss_pred ceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCccccc-------
Confidence 5899999999999999986443 56778889887 999999987754589999999999999998522221
Q ss_pred CCceEEEecCcc---ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee----ecccCCceeeeecCCCCcc
Q psy4571 239 PPELLFIHGGHT---AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD----SIRSNGGISSTASPTASST 311 (437)
Q Consensus 239 ~~~~~~~~~~h~---~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~s~~g~~l 311 (437)
.....|- +..+++..+++.+ ++|+|+. +.|+||++... ++..+... ........+++|+|.--++
T Consensus 1295 -----~~iv~~~~yGs~lTal~VH~hap-iiAsGs~-q~ikIy~~~G~-~l~~~k~n~~F~~q~~gs~scL~FHP~~~ll 1366 (1387)
T KOG1517|consen 1295 -----LTIVAHWEYGSALTALTVHEHAP-IIASGSA-QLIKIYSLSGE-QLNIIKYNPGFMGQRIGSVSCLAFHPHRLLL 1366 (1387)
T ss_pred -----ceeeeccccCccceeeeeccCCC-eeeecCc-ceEEEEecChh-hhcccccCcccccCcCCCcceeeecchhHhh
Confidence 1122222 3589999999999 8989888 99999999754 33333311 1123445677999999999
Q ss_pred cccCCCCcccccc
Q psy4571 312 ASESPTPTNSVHE 324 (437)
Q Consensus 312 ~s~s~d~~~~~~~ 324 (437)
|.|+.|.++.+|.
T Consensus 1367 AaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1367 AAGSADSTVSIYS 1379 (1387)
T ss_pred hhccCCceEEEee
Confidence 9999999865553
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-17 Score=140.61 Aligned_cols=202 Identities=14% Similarity=0.217 Sum_probs=146.9
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC-CCcEEEEEeCCCeEEEEeCCCCcee-eeEeccCC-
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILATGSADKTVALWDLRNLKLK-LHSFESHK- 193 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~h~- 193 (437)
..+|++...|.|++||.. ++..+..+++++..++.+.|..+ +.+.+.+|+.||+|++||+|...+. ...+..++
T Consensus 41 ~~vav~lSngsv~lyd~~---tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~ 117 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKG---TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSG 117 (376)
T ss_pred eeEEEEecCCeEEEEecc---chhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCC
Confidence 568899999999999999 56778889999999999999764 6667999999999999999985542 33445555
Q ss_pred CceEEEEEcCCCCcEEEEEe----CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 194 DEIFQVQWSPHNETILASSG----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
.+..+++.+-.++ ++++|. .|-.|.+||+|..+.... .....|.+.|+++.|+|..+++|++|
T Consensus 118 ~~f~~ld~nck~~-ii~~GtE~~~s~A~v~lwDvR~~qq~l~------------~~~eSH~DDVT~lrFHP~~pnlLlSG 184 (376)
T KOG1188|consen 118 TPFICLDLNCKKN-IIACGTELTRSDASVVLWDVRSEQQLLR------------QLNESHNDDVTQLRFHPSDPNLLLSG 184 (376)
T ss_pred CcceEeeccCcCC-eEEeccccccCceEEEEEEeccccchhh------------hhhhhccCcceeEEecCCCCCeEEee
Confidence 4566777665555 677774 356799999998764211 22578999999999999999999999
Q ss_pred eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC-CcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 270 SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
|.||.|.++|+........+..--.+...+..+.|..++ +.+..-+...+ ..+|++..+.+...+
T Consensus 185 SvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Et-----------f~~~ele~~~~~~~~ 250 (376)
T KOG1188|consen 185 SVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMET-----------FAIYELEDGSEETWL 250 (376)
T ss_pred cccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCc-----------eeEEEccCCChhhcc
Confidence 999999999998653322221111123345666887777 23444444555 677777777655444
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-15 Score=130.41 Aligned_cols=278 Identities=14% Similarity=0.172 Sum_probs=198.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeE-EEecCceEEEEEeeec---cccc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFT---QNFP 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~---~~~~ 101 (437)
..|+.|+ +-|.++|.|..||.+-||| .|...+..+.|++.++.+ +.+.|..|.+||+..+ +++.
T Consensus 26 a~~~~Fs-~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFS-RWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEec-cCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 6788899 9999999999999999999 466778999999998876 7788999999998755 4667
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccC-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAH-TAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h-~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
++.+|..+.|+|.+.+.+++.-.+..-.+-++..+. ...+..- .+. .....+..|.+.|++ +++|...|.+.++|.
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~-h~~Lp~d~d~dln~sas~~~fdr~g~y-IitGtsKGkllv~~a 182 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK-HSVLPKDDDGDLNSSASHGVFDRRGKY-IITGTSKGKLLVYDA 182 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc-eeeccCCCccccccccccccccCCCCE-EEEecCcceEEEEec
Confidence 899999999999877777766666555566655211 1111000 000 112233468899996 999999999999999
Q ss_pred CCCceeeeEeccCC-CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEE
Q psy4571 180 RNLKLKLHSFESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDF 256 (437)
Q Consensus 180 ~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l 256 (437)
.+.+. +..++-.. ..|..+.++..|+ .|+.-+.|..||.|+++.-..... .+..++.+.+. -.+..-.++
T Consensus 183 ~t~e~-vas~rits~~~IK~I~~s~~g~-~liiNtsDRvIR~ye~~di~~~~r-----~~e~e~~~K~qDvVNk~~Wk~c 255 (405)
T KOG1273|consen 183 ETLEC-VASFRITSVQAIKQIIVSRKGR-FLIINTSDRVIRTYEISDIDDEGR-----DGEVEPEHKLQDVVNKLQWKKC 255 (405)
T ss_pred chhee-eeeeeechheeeeEEEEeccCc-EEEEecCCceEEEEehhhhcccCc-----cCCcChhHHHHHHHhhhhhhhe
Confidence 99654 66665444 6789999999998 588889999999999874322111 00011111110 112345778
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+|+.+|.++.++...-..++||.-..|..++.+.+.. ......+.|.|--..+++- ..|. +++|..
T Consensus 256 cfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k--gE~l~DV~whp~rp~i~si-~sg~-----------v~iw~~ 321 (405)
T KOG1273|consen 256 CFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK--GEELLDVNWHPVRPIIASI-ASGV-----------VYIWAV 321 (405)
T ss_pred eecCCccEEEeccccceeEEEEecCCcceeeeecCCc--hhheeecccccceeeeeec-cCCc-----------eEEEEe
Confidence 8999999777666778899999999998888776532 2334556788888777777 4455 566766
Q ss_pred hh
Q psy4571 337 LV 338 (437)
Q Consensus 337 ~~ 338 (437)
..
T Consensus 322 ~~ 323 (405)
T KOG1273|consen 322 VQ 323 (405)
T ss_pred ec
Confidence 43
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-15 Score=130.71 Aligned_cols=223 Identities=17% Similarity=0.240 Sum_probs=158.4
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecC---------C--CceeEEEecCCCCeEEEecC-ceEEEEEeeeccc---cc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKN---------T--PFLYDLVVNNYVANISCILN-ISILFFEIIFTQN---FP 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~---------~--~~~~~~~~~~~~~~i~~~~~-~~i~~~~~~~~~~---~~ 101 (437)
+...+|+ ++...|..|+.||. ++++.+ . ..+..+.|+...--++...+ ..+++.+.+.... +.
T Consensus 8 i~~~~~N-qd~~~lsvGs~~Gy-k~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~ 85 (391)
T KOG2110|consen 8 INFIGFN-QDSTLLSVGSKDGY-KIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIF 85 (391)
T ss_pred eeeeeec-cceeEEEccCCCce-eEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEe
Confidence 4556688 99999999999984 777732 2 22334444333222221122 2466666665443 34
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEVNCLSFNPYSEYILATGS-ADKTVALW 177 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lw 177 (437)
++.+|-++.++. +.|+++-.+ .|+|||++ ..+.+.++. .+...+.++++++.+.++.+-++ ..|.|.||
T Consensus 86 fpt~IL~VrmNr---~RLvV~Lee-~IyIydI~---~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~ 158 (391)
T KOG2110|consen 86 FPTSILAVRMNR---KRLVVCLEE-SIYIYDIK---DMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF 158 (391)
T ss_pred cCCceEEEEEcc---ceEEEEEcc-cEEEEecc---cceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence 788999999976 345555544 49999999 445554443 45566878888877777333333 36889999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
|+.+.+. +..+..|.+++.+++|+|+|. +|||+|..|+ |||+.+.+++...+ ++.......|.++
T Consensus 159 d~~nl~~-v~~I~aH~~~lAalafs~~G~-llATASeKGTVIRVf~v~~G~kl~e------------FRRG~~~~~IySL 224 (391)
T KOG2110|consen 159 DTINLQP-VNTINAHKGPLAALAFSPDGT-LLATASEKGTVIRVFSVPEGQKLYE------------FRRGTYPVSIYSL 224 (391)
T ss_pred Eccccee-eeEEEecCCceeEEEECCCCC-EEEEeccCceEEEEEEcCCccEeee------------eeCCceeeEEEEE
Confidence 9998554 888999999999999999998 7999999997 89999988865544 1111224568999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+|+|+++ +|++.|..++|++|.++..
T Consensus 225 ~Fs~ds~-~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 225 SFSPDSQ-FLAASSNTETVHIFKLEKV 250 (391)
T ss_pred EECCCCC-eEEEecCCCeEEEEEeccc
Confidence 9999999 7888889999999998754
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-15 Score=144.55 Aligned_cols=255 Identities=16% Similarity=0.242 Sum_probs=181.3
Q ss_pred CceEeeecCC-----------CceeEEEecCCCCeEEE--ecCceEEEEEeeeccc----------cccCCCcceEEeeC
Q psy4571 57 EEYKIWKKNT-----------PFLYDLVVNNYVANISC--ILNISILFFEIIFTQN----------FPFPLSRQDVAWHL 113 (437)
Q Consensus 57 ~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~--~~~~~i~~~~~~~~~~----------~~~~~~v~~~~~sp 113 (437)
..+-+|+... ..+..+.+.+....+.+ ..+|.|.+||+..... ..++.+|..+.|-.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 3678898543 33566667777766633 4689999999876554 23567889999966
Q ss_pred CC-CCEEEEEECCCcEEEEEcCCCCCCCCeee---ec------cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC--
Q psy4571 114 LH-ESLFGSVADDQKLMIWDTRSHNVSKPSHT---VD------AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN-- 181 (437)
Q Consensus 114 ~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~------~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~-- 181 (437)
+. +.-|++++.||.|..|+++.-........ .. .....+++++|.+...+.++.|+++|.|.--+...
T Consensus 302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~ 381 (555)
T KOG1587|consen 302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYT 381 (555)
T ss_pred cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCc
Confidence 31 24488999999999998873211111111 11 12346899999998888899999999998744332
Q ss_pred -Cc----eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 182 -LK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 182 -~~----~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
.. .....+..|.++|+++.++|-+..++.+++ |.++++|...... .++..+..+...|+++
T Consensus 382 ~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~-------------~Pl~~~~~~~~~v~~v 447 (555)
T KOG1587|consen 382 PAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIA-------------SPLLSLDSSPDYVTDV 447 (555)
T ss_pred ccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCC-------------Ccchhhhhccceeeee
Confidence 22 113355678899999999999987676766 9999999887321 3344567777789999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+|||..+.+++++..||.+.+||+............ ..........|+++|+.++.|...|. +.++++
T Consensus 448 aWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~-~~~~~l~~~~~s~~g~~lavGd~~G~-----------~~~~~l 515 (555)
T KOG1587|consen 448 AWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK-VCSPALTRVRWSPNGKLLAVGDANGT-----------THILKL 515 (555)
T ss_pred EEcCcCceEEEEEcCCCceehhhhhccccCCccccc-ccccccceeecCCCCcEEEEecCCCc-----------EEEEEc
Confidence 999999989999999999999999865433322211 12233344578899999999999999 677777
Q ss_pred h
Q psy4571 337 L 337 (437)
Q Consensus 337 ~ 337 (437)
.
T Consensus 516 ~ 516 (555)
T KOG1587|consen 516 S 516 (555)
T ss_pred C
Confidence 4
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-14 Score=135.40 Aligned_cols=235 Identities=9% Similarity=0.109 Sum_probs=142.4
Q ss_pred EEecCCCCeEEE--ecCceEEEEEeeec------cccccCCCcceEEeeCCCCCEEEEE-ECCCcEEEEEcCCCCC-CCC
Q psy4571 72 LVVNNYVANISC--ILNISILFFEIIFT------QNFPFPLSRQDVAWHLLHESLFGSV-ADDQKLMIWDTRSHNV-SKP 141 (437)
Q Consensus 72 ~~~~~~~~~i~~--~~~~~i~~~~~~~~------~~~~~~~~v~~~~~sp~~~~~l~~~-~~dg~v~vwd~~~~~~-~~~ 141 (437)
+.+++....+.+ ..++.|..|++... ...+.......++|+|+ ++.++++ ..++.|.+|+++..+. ...
T Consensus 40 l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~-g~~l~v~~~~~~~v~v~~~~~~g~~~~~ 118 (330)
T PRK11028 40 MVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQ-GRFLFSASYNANCVSVSPLDKDGIPVAP 118 (330)
T ss_pred EEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCC-CCEEEEEEcCCCeEEEEEECCCCCCCCc
Confidence 344555554422 24566777776421 11223345678999995 5555544 4589999999974321 122
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee------eEeccCCCceEEEEEcCCCCcEEEEEeCC
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL------HSFESHKDEIFQVQWSPHNETILASSGTD 215 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~------~~~~~h~~~v~~v~~~p~~~~~l~sg~~d 215 (437)
+..+. +.....+++++|++++++++...++.|.+||+++..... .... .......++|+|++++++++...+
T Consensus 119 ~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~ 196 (330)
T PRK11028 119 IQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELN 196 (330)
T ss_pred eeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCC
Confidence 33332 233467789999999866777778999999998633211 0111 123457899999999755554558
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC------ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG------HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
+.|.+|++....... +.+..... +......+.++|++++++++...++.|.+|++........+
T Consensus 197 ~~v~v~~~~~~~~~~----------~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~ 266 (330)
T PRK11028 197 SSVDVWQLKDPHGEI----------ECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSF 266 (330)
T ss_pred CEEEEEEEeCCCCCE----------EEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEE
Confidence 999999997421110 11111111 11234568999999966655566899999999654322222
Q ss_pred eeeecccCCceeeeecCCCCcccccCC-CCc
Q psy4571 290 RLDSIRSNGGISSTASPTASSTASESP-TPT 319 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g~~l~s~s~-d~~ 319 (437)
.........+..+.++|+|++|+++.. +++
T Consensus 267 ~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~ 297 (330)
T PRK11028 267 EGHQPTETQPRGFNIDHSGKYLIAAGQKSHH 297 (330)
T ss_pred eEEEeccccCCceEECCCCCEEEEEEccCCc
Confidence 221111234556799999999987664 566
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-16 Score=133.05 Aligned_cols=167 Identities=13% Similarity=0.221 Sum_probs=130.4
Q ss_pred ccCCCcceEEeeCC----CCCEEEEEECCCcEEEEEcCCCCCCCCeeee--ccCCCCeEEEEEeCC---CCcEEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLL----HESLFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPY---SEYILATGSAD 171 (437)
Q Consensus 101 ~~~~~v~~~~~sp~----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~---~~~~l~sgs~d 171 (437)
.+..++..++|++. ....+|+++ ...+.+|......-...++.. ..|......++|+-+ +.-++|.|+.-
T Consensus 36 d~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~ 114 (385)
T KOG1034|consen 36 DHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL 114 (385)
T ss_pred cCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence 34567888888752 344666655 457889987643212223222 236677888888643 33368999999
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
|.|++.|+.+++. ...+.+|...|+.+.++|+.+.+++++|.|..|++|++++..++.. +.-..+|.+
T Consensus 115 GvIrVid~~~~~~-~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~V-----------fGG~egHrd 182 (385)
T KOG1034|consen 115 GVIRVIDVVSGQC-SKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAV-----------FGGVEGHRD 182 (385)
T ss_pred eEEEEEecchhhh-ccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEE-----------ecccccccC
Confidence 9999999998555 7788999999999999999988999999999999999999765433 223578999
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
.|.++.|+++|. .+++++.|.++++|++.
T Consensus 183 eVLSvD~~~~gd-~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 183 EVLSVDFSLDGD-RIASCGMDHSLKLWRLN 211 (385)
T ss_pred cEEEEEEcCCCC-eeeccCCcceEEEEecC
Confidence 999999999999 78899999999999998
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-16 Score=150.14 Aligned_cols=233 Identities=16% Similarity=0.145 Sum_probs=155.5
Q ss_pred ceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 87 ISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 87 ~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
..|.+||....... .....+...+|+| +++.|+.++.+ ..|++||+.++. .+.+..+.+| ...++|+||
T Consensus 184 ~~i~i~d~dg~~~~~lt~~~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~-~~~l~~~~g~---~~~~~wSPD 258 (429)
T PRK01742 184 YEVRVADYDGFNQFIVNRSSQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGA-RKVVASFRGH---NGAPAFSPD 258 (429)
T ss_pred EEEEEECCCCCCceEeccCCCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCc-eEEEecCCCc---cCceeECCC
Confidence 57888886443222 2345789999999 56777766543 369999997432 1233333333 446899999
Q ss_pred CCcEEEEEeCCCeEEEE--eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lw--d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|+.++++.+.+|.+.|| |+.++. ...+..+...+....|+|+|+.+++++..++...||++........
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~--~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~------- 329 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGT--PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGAS------- 329 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCC--eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeE-------
Confidence 99744445678876665 555533 4556667777889999999997666666788888998765322111
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.. ++.. ....|+|+|+ .++..+.++ +.+||+.+++....... .......|+|||++++.++.++
T Consensus 330 ------~l-~~~~--~~~~~SpDG~-~ia~~~~~~-i~~~Dl~~g~~~~lt~~-----~~~~~~~~sPdG~~i~~~s~~g 393 (429)
T PRK01742 330 ------LV-GGRG--YSAQISADGK-TLVMINGDN-VVKQDLTSGSTEVLSST-----FLDESPSISPNGIMIIYSSTQG 393 (429)
T ss_pred ------Ee-cCCC--CCccCCCCCC-EEEEEcCCC-EEEEECCCCCeEEecCC-----CCCCCceECCCCCEEEEEEcCC
Confidence 11 2332 4578999999 555555565 55699988764321111 1224568999999999998877
Q ss_pred cccccccccccccccccc--hhhhhhhhhcCCCccccccCCCCC
Q psy4571 319 TNSVHEKNYWQGLVLFDI--LVCEEQRQLLGTEEESSDRHSSDN 360 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~--~~~~~~~~~~~h~~~~~~~~~~~~ 360 (437)
. ..+|++ .+|+.++.+.+|...+....++|-
T Consensus 394 ~-----------~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 394 L-----------GKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred C-----------ceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 7 455554 368888888888887888888874
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.6e-16 Score=130.25 Aligned_cols=230 Identities=15% Similarity=0.180 Sum_probs=159.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc------------eeEEEecCCCCeEEEecCceEEEEEeeeccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF------------LYDLVVNNYVANISCILNISILFFEIIFTQN 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~ 99 (437)
..--.|++++|. .++ ++.+|...|.+++|..++.. +..+-..+.....+-..|..+.+|++....-
T Consensus 12 p~~~~v~s~~fq-a~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~ 89 (323)
T KOG0322|consen 12 PHSSSVTSVLFQ-ANE-RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAF 89 (323)
T ss_pred cccchheehhhc-cch-hhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccCcce
Confidence 344457778887 544 48899999999999955422 2222223334444556677788886422000
Q ss_pred c---------------------------------------------------------ccCCCcceEEeeCCCC--CEEE
Q psy4571 100 F---------------------------------------------------------PFPLSRQDVAWHLLHE--SLFG 120 (437)
Q Consensus 100 ~---------------------------------------------------------~~~~~v~~~~~sp~~~--~~l~ 120 (437)
. .....+.|..|....+ -+++
T Consensus 90 i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lll 169 (323)
T KOG0322|consen 90 ISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLL 169 (323)
T ss_pred EEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEE
Confidence 0 0001233333322222 2677
Q ss_pred EEECCCcEEEEEcCCCC-------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC--ceeeeE-ec
Q psy4571 121 SVADDQKLMIWDTRSHN-------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL--KLKLHS-FE 190 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~--~~~~~~-~~ 190 (437)
+|..+|.|.+||+..+. ..+.......|..+|.++.+.+.-.. =++|+.+..+..|+++.. ..++.. ..
T Consensus 170 aGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~r-Gisgga~dkl~~~Sl~~s~gslq~~~e~~ 248 (323)
T KOG0322|consen 170 AGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDR-GISGGADDKLVMYSLNHSTGSLQIRKEIT 248 (323)
T ss_pred EeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcC-CcCCCccccceeeeeccccCcccccceEE
Confidence 88999999999998541 11334445679999999999876554 678888888999998753 222221 22
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
-.+..|..+..-||++ ++||++.|++||||..++.+.. ..++.|.+.|++++|+|+.+ ++|+++
T Consensus 249 lknpGv~gvrIRpD~K-IlATAGWD~RiRVyswrtl~pL--------------AVLkyHsagvn~vAfspd~~-lmAaas 312 (323)
T KOG0322|consen 249 LKNPGVSGVRIRPDGK-ILATAGWDHRIRVYSWRTLNPL--------------AVLKYHSAGVNAVAFSPDCE-LMAAAS 312 (323)
T ss_pred ecCCCccceEEccCCc-EEeecccCCcEEEEEeccCCch--------------hhhhhhhcceeEEEeCCCCc-hhhhcc
Confidence 2245688999999998 8999999999999999997554 44789999999999999988 999999
Q ss_pred CCCeEEEEeC
Q psy4571 271 EDNIMQEYCD 280 (437)
Q Consensus 271 ~dg~i~iwd~ 280 (437)
.|+.|.+|++
T Consensus 313 kD~rISLWkL 322 (323)
T KOG0322|consen 313 KDARISLWKL 322 (323)
T ss_pred CCceEEeeec
Confidence 9999999986
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6e-15 Score=141.96 Aligned_cols=266 Identities=25% Similarity=0.349 Sum_probs=188.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-eeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-LYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
-....+.++.|. +.+..++.++.|+.+.+|+...+. .......... ..+..+.
T Consensus 63 ~~~~~i~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~ 116 (466)
T COG2319 63 GHEDSITSIAFS-PDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHD-------------------------SSVSKLA 116 (466)
T ss_pred eccceEEEEEEC-CCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCC-------------------------CceeeEE
Confidence 444556666777 667777777777777777766554 1111100000 1344444
Q ss_pred e-eCCCCCEEEEEEC-CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCceeee
Q psy4571 111 W-HLLHESLFGSVAD-DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLKLKLH 187 (437)
Q Consensus 111 ~-sp~~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~~~~~ 187 (437)
+ +++....++..+. |+.+.+|+... .......+..|...|..++|+|++.. +++++. |+.+++|+...... +.
T Consensus 117 ~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 192 (466)
T COG2319 117 LSSPDGNSILLASSSLDGTVKLWDLST--PGKLIRTLEGHSESVTSLAFSPDGKL-LASGSSLDGTIKLWDLRTGKP-LS 192 (466)
T ss_pred EECCCcceEEeccCCCCccEEEEEecC--CCeEEEEEecCcccEEEEEECCCCCE-EEecCCCCCceEEEEcCCCce-EE
Confidence 4 6633325555444 99999999983 14667788899999999999999994 788875 99999999998444 77
Q ss_pred EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE-EecCccccEEEEEEccCCCeEE
Q psy4571 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF-IHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 188 ~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~~l 266 (437)
.+..|...|.+++|+|+++.++++++.|+.|++||...+. .+. .+.+|.... ...|+|++. ++
T Consensus 193 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~-~~ 256 (466)
T COG2319 193 TLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK--------------LLRSTLSGHSDSV-VSSFSPDGS-LL 256 (466)
T ss_pred eeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCc--------------EEeeecCCCCcce-eEeECCCCC-EE
Confidence 7788999999999999997445565899999999877432 222 467777665 338999996 77
Q ss_pred EEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 267 CSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 267 ~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
++++.|+.+++|+...... ...+ ..+......+.+.|++..+++++.++. +++||..+.......
T Consensus 257 ~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~d~~-----------~~~~~~~~~~~~~~~ 322 (466)
T COG2319 257 ASGSSDGTIRLWDLRSSSSLLRTL---SGHSSSVLSVAFSPDGKLLASGSSDGT-----------VRLWDLETGKLLSSL 322 (466)
T ss_pred EEecCCCcEEEeeecCCCcEEEEE---ecCCccEEEEEECCCCCEEEEeeCCCc-----------EEEEEcCCCceEEEe
Confidence 7999999999999997765 2222 234455666689998888888888866 677777777666555
Q ss_pred c--CCCccccccCC
Q psy4571 346 L--GTEEESSDRHS 357 (437)
Q Consensus 346 ~--~h~~~~~~~~~ 357 (437)
. +|...+..+.+
T Consensus 323 ~~~~~~~~~~~~~~ 336 (466)
T COG2319 323 TLKGHEGPVSSLSF 336 (466)
T ss_pred eecccCCceEEEEE
Confidence 5 77665565555
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.8e-16 Score=141.49 Aligned_cols=203 Identities=17% Similarity=0.277 Sum_probs=152.6
Q ss_pred CeEEEecCceEEEEEeeec--cc-cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEE
Q psy4571 79 ANISCILNISILFFEIIFT--QN-FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155 (437)
Q Consensus 79 ~~i~~~~~~~i~~~~~~~~--~~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l 155 (437)
..+.|+.||.+.+..-... +. -.|...+.+-.|+| ++.-|++++.||.|++|.-. +....++.....+|.|+
T Consensus 77 ~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSrs----GMLRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 77 TLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSP-DGAGLLTAGEDGVIKIWSRS----GMLRSTVVQNEESIRCA 151 (737)
T ss_pred eEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCC-CCceeeeecCCceEEEEecc----chHHHHHhhcCceeEEE
Confidence 3457888998888763321 11 24667889999999 67778899999999999865 33344444556789999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+|.|+...++.+.+. .+.+=-+..... +...++|.+-|.++.|+|..+ ++++|+.|-..+|||-..
T Consensus 152 ~W~p~S~~vl~c~g~--h~~IKpL~~n~k-~i~WkAHDGiiL~~~W~~~s~-lI~sgGED~kfKvWD~~G---------- 217 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQGG--HISIKPLAANSK-IIRWRAHDGLVLSLSWSTQSN-IIASGGEDFRFKIWDAQG---------- 217 (737)
T ss_pred EECCCCCceEEecCC--eEEEeecccccc-eeEEeccCcEEEEeecCcccc-ceeecCCceeEEeecccC----------
Confidence 999999987766654 444444554344 667889999999999999998 799999999999999876
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..++.-..|..+|++++|+|+ . +++.++.+ +++ ...+..+++..++||+||..++.|+
T Consensus 218 -----~~Lf~S~~~ey~ITSva~npd-~-~~~v~S~n-t~R--------------~~~p~~GSifnlsWS~DGTQ~a~gt 275 (737)
T KOG1524|consen 218 -----ANLFTSAAEEYAITSVAFNPE-K-DYLLWSYN-TAR--------------FSSPRVGSIFNLSWSADGTQATCGT 275 (737)
T ss_pred -----cccccCChhccceeeeeeccc-c-ceeeeeee-eee--------------ecCCCccceEEEEEcCCCceeeccc
Confidence 345556789999999999999 4 45555543 343 2333456677889999999999998
Q ss_pred CCCcccc
Q psy4571 316 PTPTNSV 322 (437)
Q Consensus 316 ~d~~~~~ 322 (437)
..|.+.+
T Consensus 276 ~~G~v~~ 282 (737)
T KOG1524|consen 276 STGQLIV 282 (737)
T ss_pred cCceEEE
Confidence 8876543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.6e-16 Score=133.21 Aligned_cols=205 Identities=16% Similarity=0.198 Sum_probs=163.7
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+|+|.+|++ +...+|.+-+...|.||.....+..+..++++.|...|++++|+|...+ |++++.|..-.+|....
T Consensus 9 ~~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snr-Ivtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 9 LLEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNR-IVTCSHDRNAYVWTQPS 86 (361)
T ss_pred ccCceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCc-eeEccCCCCccccccCC
Confidence 357899999999 6889999999999999999877667889999999999999999999986 99999999999999843
Q ss_pred Cc--eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 182 LK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 182 ~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
+. .+...+..++..++++.|+|.++ .||+|+....|.||-++..+.--. ..+..+.+.+.|.+++|+
T Consensus 87 ~~~WkptlvLlRiNrAAt~V~WsP~en-kFAVgSgar~isVcy~E~ENdWWV----------sKhikkPirStv~sldWh 155 (361)
T KOG1523|consen 87 GGTWKPTLVLLRINRAATCVKWSPKEN-KFAVGSGARLISVCYYEQENDWWV----------SKHIKKPIRSTVTSLDWH 155 (361)
T ss_pred CCeeccceeEEEeccceeeEeecCcCc-eEEeccCccEEEEEEEecccceeh----------hhhhCCccccceeeeecc
Confidence 22 23445667899999999999998 599999999999998887653211 112345678899999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCC------------------CceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDS------------------DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
|++- ++++|+.|+.++++..--.. .+.++. ...+.+..+.|+|+|..|+-.+.|.++.
T Consensus 156 pnnV-LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~---~~ggwvh~v~fs~sG~~lawv~Hds~v~ 231 (361)
T KOG1523|consen 156 PNNV-LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS---SSGGWVHGVLFSPSGNRLAWVGHDSTVS 231 (361)
T ss_pred CCcc-eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc---cCCCceeeeEeCCCCCEeeEecCCCceE
Confidence 9998 99999999999999753110 111111 2334566779999999999999999854
Q ss_pred cc
Q psy4571 322 VH 323 (437)
Q Consensus 322 ~~ 323 (437)
+.
T Consensus 232 ~~ 233 (361)
T KOG1523|consen 232 FV 233 (361)
T ss_pred Ee
Confidence 44
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-15 Score=138.82 Aligned_cols=241 Identities=9% Similarity=0.107 Sum_probs=146.6
Q ss_pred CCcceEEeeCCCCCEEEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
.....++++| ++++|+++ ..++.|.+|++............ ...+....++|+|++++++++...++.|.+|++++.
T Consensus 35 ~~~~~l~~sp-d~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~ 112 (330)
T PRK11028 35 GQVQPMVISP-DKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKD 112 (330)
T ss_pred CCCccEEECC-CCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCC
Confidence 4566889999 56665554 55889999999732112222222 223456789999999975555556899999999753
Q ss_pred ce---eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 183 KL---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 183 ~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.. ....+. +......++++|++++++++...++.|.+||+.......... ..... ... ......++|+
T Consensus 113 g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~------~~~~~-~~~-g~~p~~~~~~ 183 (330)
T PRK11028 113 GIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQE------PAEVT-TVE-GAGPRHMVFH 183 (330)
T ss_pred CCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccC------CCcee-cCC-CCCCceEEEC
Confidence 32 122222 334567889999999876777778999999997633221100 00001 111 2345779999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCC--CCC--ceeeeeeec---ccCCceeeeecCCCCcccccCC-CCccccccccccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDST--DSD--TKTMRLDSI---RSNGGISSTASPTASSTASESP-TPTNSVHEKNYWQGL 331 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~--~~~--~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i 331 (437)
|+|++++++...++.|.+|+++. ++. .+.+..... .......+.++|+|++++++.. ++. |
T Consensus 184 pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~-----------I 252 (330)
T PRK11028 184 PNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASL-----------I 252 (330)
T ss_pred CCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCe-----------E
Confidence 99996666656699999999974 222 222211000 0111224678999998888753 444 7
Q ss_pred ccccchhhhhhhhhcCCC---ccccccCCCCCCccccc
Q psy4571 332 VLFDILVCEEQRQLLGTE---EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 332 ~~wd~~~~~~~~~~~~h~---~~~~~~~~~~~~~~~~~ 366 (437)
.+|++........+.++. .....+.++|+|+.+..
T Consensus 253 ~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~v 290 (330)
T PRK11028 253 SVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIA 290 (330)
T ss_pred EEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEE
Confidence 778775433222222221 23456778888887664
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-15 Score=137.21 Aligned_cols=189 Identities=20% Similarity=0.302 Sum_probs=144.4
Q ss_pred EEEecCceEEEEEeeec--------cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC---------------
Q psy4571 81 ISCILNISILFFEIIFT--------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--------------- 137 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~--------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--------------- 137 (437)
+.....|.+.+.|.... .....+.+|+|+.|-|-+...|+++..+|.+++||.....
T Consensus 189 lIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~ 268 (636)
T KOG2394|consen 189 LIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQ 268 (636)
T ss_pred EEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCe
Confidence 34445566766664331 1112357899999999888899999999999999764210
Q ss_pred ----------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc
Q psy4571 138 ----------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 138 ----------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 207 (437)
...++..+.--++.|+.++|+|||++ ||+.+.||.+||||..+.+. +..++..-+...|++|+|||++
T Consensus 269 f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~-LA~VSqDGfLRvF~fdt~eL-lg~mkSYFGGLLCvcWSPDGKy 346 (636)
T KOG2394|consen 269 FAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKY-LATVSQDGFLRIFDFDTQEL-LGVMKSYFGGLLCVCWSPDGKY 346 (636)
T ss_pred eEEeeeeccccCCccceeEeccccccceeEcCCCce-EEEEecCceEEEeeccHHHH-HHHHHhhccceEEEEEcCCccE
Confidence 01122223333568999999999997 99999999999999998554 6666677789999999999995
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc---------------------------
Q psy4571 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--------------------------- 260 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--------------------------- 260 (437)
+++|+.|..|.||.+... +.+..-.+|+++|+.|+|.|
T Consensus 347 -IvtGGEDDLVtVwSf~er--------------RVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~ 411 (636)
T KOG2394|consen 347 -IVTGGEDDLVTVWSFEER--------------RVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEI 411 (636)
T ss_pred -EEecCCcceEEEEEeccc--------------eEEEeccccccceeeEeecccccccccccccccccccccchhccccc
Confidence 999999999999999875 45666889999999999983
Q ss_pred --------C------------CCeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 261 --------N------------EPWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 261 --------~------------~~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
+ -.+.+.+.+.|-.+.+||+......
T Consensus 412 r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L~ 457 (636)
T KOG2394|consen 412 RANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVLV 457 (636)
T ss_pred ccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhhcc
Confidence 0 1256788899999999999865433
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-16 Score=144.72 Aligned_cols=173 Identities=21% Similarity=0.397 Sum_probs=135.4
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCC-CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPY-SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~-~~~~l~sgs~dg~i~lwd 178 (437)
.|...|+|++|+. ++.+|++|+.|-.+.|||+- ..+.+..+ .+|...|.++.|-|. +..++++|..|..|+++|
T Consensus 48 GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~---~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 48 GHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPF---EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred cccceecceeecC-CCCEEeecCCcceEEeecch---hcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 3667899999999 78999999999999999998 44555444 499999999999984 444799999999999999
Q ss_pred CCC---------CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 179 LRN---------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 179 ~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
+.. .......+..|...|..++-.|++++.+.+++.||+|+-+|++.......-. .....+..+...
T Consensus 124 l~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~----~~~~~l~ny~~~ 199 (758)
T KOG1310|consen 124 LDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE----DCPSILVNYNPQ 199 (758)
T ss_pred cccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc----cccHHHHHhchh
Confidence 985 2333445667999999999999998889999999999999999854322210 001111112223
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
--...++..+|..+++|+.|+.|-..++||.+
T Consensus 200 lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 200 LIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred hheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 34678999999999999999999999999943
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.1e-16 Score=144.21 Aligned_cols=211 Identities=19% Similarity=0.285 Sum_probs=157.6
Q ss_pred eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC-------ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC
Q psy4571 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL-------KLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215 (437)
Q Consensus 143 ~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d 215 (437)
.++..|...|..++|.|.... |++++.||+|++|+++.. -.++.++++|.++|.|+++.+++.+ +.+|+.|
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~-lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~-~ysgg~D 365 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPV-LITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEH-CYSGGID 365 (577)
T ss_pred eeeecchhhhhhhhcCCCCCe-EEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceE-EEeeccC
Confidence 466678899999999999885 999999999999999421 2457889999999999999999985 8899999
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee--
Q psy4571 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-- 293 (437)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-- 293 (437)
|+|+.|++........ ...+..+...+.||.+.|+.+++|+... .|++++.||+++.|+.....+ .++....
T Consensus 366 g~I~~w~~p~n~dp~d----s~dp~vl~~~l~Ghtdavw~l~~s~~~~-~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~ 439 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDD----SYDPSVLSGTLLGHTDAVWLLALSSTKD-RLLSCSSDGTVRLWEPTEESP-CTFGEPKEH 439 (577)
T ss_pred ceeeeeccCCCCCccc----ccCcchhccceeccccceeeeeeccccc-ceeeecCCceEEeeccCCcCc-cccCCcccc
Confidence 9999998874322211 1122344566889999999999999888 577999999999999875544 1111000
Q ss_pred --------ccc---------------------------------------CCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 294 --------IRS---------------------------------------NGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 294 --------~~~---------------------------------------~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
... .....+.+.|.+.+.+++-.++.
T Consensus 440 g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~------- 512 (577)
T KOG0642|consen 440 GYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRS------- 512 (577)
T ss_pred CCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCc-------
Confidence 000 00111233344444444444444
Q ss_pred cccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 327 YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
|+++|..+|+.+.....|.+.++++++.|+|-.++++ +|.+.
T Consensus 513 ----Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld 561 (577)
T KOG0642|consen 513 ----IRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLD 561 (577)
T ss_pred ----eecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhcc
Confidence 9999999999999999999999999999999988875 67663
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.3e-16 Score=139.78 Aligned_cols=304 Identities=13% Similarity=0.119 Sum_probs=212.2
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcc
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQ 107 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~ 107 (437)
+++.-+.-.|..+.|+ ..++.+++||.|..|-+|+-..+...--.-+++. ..|.
T Consensus 136 ~kL~~H~GcVntV~FN-~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~-------------------------~Nvf 189 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFN-QRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHC-------------------------NNVF 189 (559)
T ss_pred hcccCCCCccceeeec-ccCceeeccCccceEEeehhhccCcccccccccc-------------------------cchh
Confidence 4456677789999999 9999999999999999999544333211111221 1222
Q ss_pred eEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-
Q psy4571 108 DVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK- 185 (437)
Q Consensus 108 ~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~- 185 (437)
.-.|-|. +..-+++++.||.|++=.+...+.......+..|.++|..++.-|+..+-|.+++.|+.+.-.|++.....
T Consensus 190 QaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~ 269 (559)
T KOG1334|consen 190 QAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE 269 (559)
T ss_pred hhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccc
Confidence 2334443 45678899999999998776544444566777899999999999999999999999999999999874321
Q ss_pred -eeEeccCCC---ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC-CCCCCCceEEEecCccccEEEEEEcc
Q psy4571 186 -LHSFESHKD---EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED-AEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 186 -~~~~~~h~~---~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
...-..+.. ..+.++..|...+.+++|+.|..+++||.+.......... ..-.|..+ .......|++++|+.
T Consensus 270 ~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl---~~d~~v~ITgl~Ysh 346 (559)
T KOG1334|consen 270 KFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHL---VEDDPVNITGLVYSH 346 (559)
T ss_pred eeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccc---cccCcccceeEEecC
Confidence 111223333 5688999999988899999999999999987654322110 00001011 112234699999998
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCC------------cee-eeeeecccCCceee-eecCCCCcccccCCCCcccccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSD------------TKT-MRLDSIRSNGGISS-TASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~-~~~~~~~~~~~~~~-~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
++..++ +...|-.|+++.-.-+.- .+. ++.+. ....+..+ -|-|...++++|+.-|.
T Consensus 347 ~~sElL-aSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHr-N~~TVKgVNFfGPrsEyVvSGSDCGh------- 417 (559)
T KOG1334|consen 347 DGSELL-ASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHR-NSRTVKGVNFFGPRSEYVVSGSDCGH------- 417 (559)
T ss_pred Ccccee-eeecccceEEeccccccCCCCCCCcchhhccchhhcccc-cccccceeeeccCccceEEecCccce-------
Confidence 887455 667788899995443211 111 22222 11123333 57899999999999988
Q ss_pred cccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 327 YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
|.+||-.+++.++.+.|-...|+++.-+|.--.++++ ||....
T Consensus 418 ----IFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 418 ----IFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ----EEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 8999999999999998877799999998877766665 898733
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-16 Score=144.88 Aligned_cols=179 Identities=17% Similarity=0.276 Sum_probs=138.9
Q ss_pred EECCCcEEEEEcCCCCCCC--CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce------eeeEeccCC
Q psy4571 122 VADDQKLMIWDTRSHNVSK--PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL------KLHSFESHK 193 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~------~~~~~~~h~ 193 (437)
++..|.|-||+++..+... .+-.+ .....|+++.|.|-....|++++.||.|+||.+..+.. +...+..|.
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l-~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~ 677 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGL-FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHG 677 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCccccccc-ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeeccc
Confidence 4557899999998543211 11122 23457999999997666799999999999999876442 345677899
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..|+++.|+|--..+|++++.|.+|++||++++..... +.+|++.|.+++|+|+|+ .+++.+.||
T Consensus 678 eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~--------------l~gHtdqIf~~AWSpdGr-~~AtVcKDg 742 (1012)
T KOG1445|consen 678 EKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSR--------------LVGHTDQIFGIAWSPDGR-RIATVCKDG 742 (1012)
T ss_pred ceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhhe--------------eccCcCceeEEEECCCCc-ceeeeecCc
Confidence 99999999998777899999999999999999865444 789999999999999999 899999999
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+|++|..++++.. .+.....-......+.|.-+|++++..+.|
T Consensus 743 ~~rVy~Prs~e~p-v~Eg~gpvgtRgARi~wacdgr~viv~Gfd 785 (1012)
T KOG1445|consen 743 TLRVYEPRSREQP-VYEGKGPVGTRGARILWACDGRIVIVVGFD 785 (1012)
T ss_pred eEEEeCCCCCCCc-cccCCCCccCcceeEEEEecCcEEEEeccc
Confidence 9999999887532 222222223445566888999988776655
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4e-15 Score=137.78 Aligned_cols=277 Identities=21% Similarity=0.194 Sum_probs=197.2
Q ss_pred eEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
..++..|++.+..+...+.++.+ +.+.||++++|.+.++.++ .+...|.|++|+|....-++++..++.+.|-+..
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~ 472 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPI 472 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCcc
Confidence 35677899999999988888888 5567899999999888765 4677999999999765555555555555555543
Q ss_pred CCC----------------------------------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC---CeEEEE
Q psy4571 135 SHN----------------------------------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---KTVALW 177 (437)
Q Consensus 135 ~~~----------------------------------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g~i~lw 177 (437)
-+. ...-+.....|...|..+.|+..|.| |++...+ ..|.|.
T Consensus 473 ~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDY-latV~~~~~~~~VliH 551 (733)
T KOG0650|consen 473 FGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDY-LATVMPDSGNKSVLIH 551 (733)
T ss_pred ccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCce-EEEeccCCCcceEEEE
Confidence 110 00112233457889999999999998 7776553 558899
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
++..... ...+....+.|.++.|+|...++| .++ ...|+|||+.....+.. +......|..++
T Consensus 552 QLSK~~s-Q~PF~kskG~vq~v~FHPs~p~lf-VaT-q~~vRiYdL~kqelvKk--------------L~tg~kwiS~ms 614 (733)
T KOG0650|consen 552 QLSKRKS-QSPFRKSKGLVQRVKFHPSKPYLF-VAT-QRSVRIYDLSKQELVKK--------------LLTGSKWISSMS 614 (733)
T ss_pred ecccccc-cCchhhcCCceeEEEecCCCceEE-EEe-ccceEEEehhHHHHHHH--------------HhcCCeeeeeee
Confidence 9987444 345555678899999999998744 444 56899999987544433 334456899999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
.+|.|.+ ++.|+.|+.+..+|+.-+ ++.+.+.. |...+..+++++.-.++++|+.|+++.++..... -|+
T Consensus 615 ihp~GDn-li~gs~d~k~~WfDldlsskPyk~lr~---H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY-----~Dl 685 (733)
T KOG0650|consen 615 IHPNGDN-LILGSYDKKMCWFDLDLSSKPYKTLRL---HEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVY-----NDL 685 (733)
T ss_pred ecCCCCe-EEEecCCCeeEEEEcccCcchhHHhhh---hhhhhhhhhhccccceeeeecCCCcEEEEeeeee-----hhh
Confidence 9999995 558999999999999765 34444443 5677888899999999999999999877654311 122
Q ss_pred hhhh---hhhhhcCCCcc----ccccCCCCCCc
Q psy4571 337 LVCE---EQRQLLGTEEE----SSDRHSSDNDT 362 (437)
Q Consensus 337 ~~~~---~~~~~~~h~~~----~~~~~~~~~~~ 362 (437)
.... .++.+.||.-. +....|+|..-
T Consensus 686 ~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qp 718 (733)
T KOG0650|consen 686 LQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQP 718 (733)
T ss_pred hcCCceEeeeeccCceeecccceEeecccCCCc
Confidence 2222 34677888764 44455666543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.3e-16 Score=140.79 Aligned_cols=227 Identities=15% Similarity=0.196 Sum_probs=183.6
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCC----------CceeEEEecCCCCeEEEecCceEEEEEeeec
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----------PFLYDLVVNNYVANISCILNISILFFEIIFT 97 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 97 (437)
+.+.+..|+.|.+.|. .+|..++.|+..|.+-.+|-.+ ..+.++.|.+...++++....-+.+||-...
T Consensus 123 f~L~l~eFGPY~~~yt-rnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~Gt 201 (545)
T KOG1272|consen 123 FDLSLPEFGPYHLDYT-RNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGT 201 (545)
T ss_pred ccccccccCCeeeeec-CCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCc
Confidence 3478889999999999 9999999999999999998544 3355666666667777777888999986544
Q ss_pred c--ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 98 Q--NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 98 ~--~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
+ ++.....|..+.|-| ...+|++++..|.++--|+. .++.+..+....+++..++-+|-+. ++-+|...|+|.
T Consensus 202 ElHClk~~~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS---~GklVa~~~t~~G~~~vm~qNP~Na-Vih~GhsnGtVS 276 (545)
T KOG1272|consen 202 ELHCLKRHIRVARLEFLP-YHFLLVAASEAGFLKYQDVS---TGKLVASIRTGAGRTDVMKQNPYNA-VIHLGHSNGTVS 276 (545)
T ss_pred EEeehhhcCchhhhcccc-hhheeeecccCCceEEEeec---hhhhhHHHHccCCccchhhcCCccc-eEEEcCCCceEE
Confidence 3 444567899999999 67889999999999999999 6677777777788899999999888 799999999999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+|.... +.++..+..|.++|.++++.++|++ ++|.+.|..++|||+++.....+ ... ..+...
T Consensus 277 lWSP~s-kePLvKiLcH~g~V~siAv~~~G~Y-MaTtG~Dr~~kIWDlR~~~ql~t--------------~~t-p~~a~~ 339 (545)
T KOG1272|consen 277 LWSPNS-KEPLVKILCHRGPVSSIAVDRGGRY-MATTGLDRKVKIWDLRNFYQLHT--------------YRT-PHPASN 339 (545)
T ss_pred ecCCCC-cchHHHHHhcCCCcceEEECCCCcE-EeecccccceeEeeeccccccce--------------eec-CCCccc
Confidence 999998 5567788899999999999999996 89999999999999998653332 222 335677
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
+++|..| +|| .+....+.+|.-
T Consensus 340 ls~Sqkg--lLA-~~~G~~v~iw~d 361 (545)
T KOG1272|consen 340 LSLSQKG--LLA-LSYGDHVQIWKD 361 (545)
T ss_pred ccccccc--cee-eecCCeeeeehh
Confidence 8888776 354 445557899953
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-17 Score=156.02 Aligned_cols=211 Identities=19% Similarity=0.296 Sum_probs=159.9
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v 220 (437)
.++.+.+|.+.|.|+.|...|.+ +++|+.|..++||.+.+..+ +....+|.+.|+.++.+.++- ++++++.|..|++
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~-Iitgsdd~lvKiwS~et~~~-lAs~rGhs~ditdlavs~~n~-~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRY-IITGSDDRLVKIWSMETARC-LASCRGHSGDITDLAVSSNNT-MIAAASNDKVIRV 258 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccce-EeecCccceeeeeeccchhh-hccCCCCccccchhccchhhh-hhhhcccCceEEE
Confidence 44566799999999999999997 99999999999999998555 889999999999999988775 6899999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCc
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGG 299 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~ 299 (437)
|.+..+..+.. +.+|++.|++++|+|.. +.+.||++++||.+-...+.... .......-.
T Consensus 259 Wrl~~~~pvsv--------------LrghtgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~ 319 (1113)
T KOG0644|consen 259 WRLPDGAPVSV--------------LRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLV 319 (1113)
T ss_pred EecCCCchHHH--------------HhccccceeeeccCccc-----cCCCCCceEeccccccccccCCCCCCcccccce
Confidence 99999755444 78999999999999975 67899999999998211111100 001111223
Q ss_pred eeeeecCCCCcccccCCCCcccccccc--------------------------cccccccccchhhhhhhhhcCCCcccc
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKN--------------------------YWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~--------------------------~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
.+..+..++...++|+.++....|+.. ....+.+|++.+|.+.+.+.+|.+.+.
T Consensus 320 ~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~y 399 (1113)
T KOG0644|consen 320 DSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVY 399 (1113)
T ss_pred eeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhccccccee
Confidence 333455566666666666665555322 222378899999999999999999999
Q ss_pred ccCCCCCCccccc--------cccccCH
Q psy4571 354 DRHSSDNDTEDLN--------SIWSMTD 373 (437)
Q Consensus 354 ~~~~~~~~~~~~~--------~~w~~~~ 373 (437)
.+.++|.+..++. .+|++..
T Consensus 400 vLd~Hpfn~ri~msag~dgst~iwdi~e 427 (1113)
T KOG0644|consen 400 VLDVHPFNPRIAMSAGYDGSTIIWDIWE 427 (1113)
T ss_pred eeeecCCCcHhhhhccCCCceEeeeccc
Confidence 9998886554443 3888743
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-14 Score=118.25 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=154.3
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeee---------------------cCCCceeEEEecCCCCeEEEecCceEEEEEe
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWK---------------------KNTPFLYDLVVNNYVANISCILNISILFFEI 94 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~---------------------~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~ 94 (437)
.|++-+++ |..++++.|..+|+|-+.. .|.+.++.+.+. ...+...+||.|+-|..
T Consensus 12 tvf~qa~s-p~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAIS-PSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDGLVYGWEW 88 (325)
T ss_pred HHHHHhhC-CcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCceEEEeee
Confidence 45566777 8888899999999888877 345667777764 45566677899999975
Q ss_pred eeccc-----------cccC------CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 95 IFTQN-----------FPFP------LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 95 ~~~~~-----------~~~~------~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
....+ .+.. ..|+++-..|..+.+|.+| .|+.++-||++ .++..+.+++|++.|.++.-
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag-GD~~~y~~dlE---~G~i~r~~rGHtDYvH~vv~ 164 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG-GDGVIYQVDLE---DGRIQREYRGHTDYVHSVVG 164 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec-CCeEEEEEEec---CCEEEEEEcCCcceeeeeee
Confidence 42211 1111 2578999999666666554 79999999999 67888899999999999998
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc---------CC-CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFES---------HK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~---------h~-~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~ 227 (437)
-..... +++|++||++++||.++.+. +..+.. |. ..|.+++-+ .. .+++|+ ...+.+|.++..+
T Consensus 165 R~~~~q-ilsG~EDGtvRvWd~kt~k~-v~~ie~yk~~~~lRp~~g~wigala~~--ed-WlvCGg-Gp~lslwhLrsse 238 (325)
T KOG0649|consen 165 RNANGQ-ILSGAEDGTVRVWDTKTQKH-VSMIEPYKNPNLLRPDWGKWIGALAVN--ED-WLVCGG-GPKLSLWHLRSSE 238 (325)
T ss_pred cccCcc-eeecCCCccEEEEeccccce-eEEeccccChhhcCcccCceeEEEecc--Cc-eEEecC-CCceeEEeccCCC
Confidence 554553 99999999999999999765 555432 21 235566654 34 365554 5679999999875
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
+.. ++.+.+ .+..+.|..+ .+++++..+.+.-|.+..
T Consensus 239 ~t~------------vfpipa---~v~~v~F~~d---~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 239 STC------------VFPIPA---RVHLVDFVDD---CVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred ceE------------EEeccc---ceeEeeeecc---eEEEeccccceeeeeecc
Confidence 433 344444 5677777544 677888888888887763
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-14 Score=122.57 Aligned_cols=250 Identities=14% Similarity=0.184 Sum_probs=177.5
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
.-.++|.||+ ++...++.+-.+..+-|+...+...+..... ...+...|++++|+|
T Consensus 10 ~~pitchAwn-~drt~iAv~~~~~evhiy~~~~~~~w~~~ht-----------------------ls~Hd~~vtgvdWap 65 (361)
T KOG1523|consen 10 LEPITCHAWN-SDRTQIAVSPNNHEVHIYSMLGADLWEPAHT-----------------------LSEHDKIVTGVDWAP 65 (361)
T ss_pred cCceeeeeec-CCCceEEeccCCceEEEEEecCCCCceecee-----------------------hhhhCcceeEEeecC
Confidence 4568899999 8899999998888888888766554333210 012446788999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce---eeeEec
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL---KLHSFE 190 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~---~~~~~~ 190 (437)
..+.|++++.|..-+||....+...++...+..+...++++.|+|.+.. |++|+....|.+|-++.... ....-+
T Consensus 66 -~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk-FAVgSgar~isVcy~E~ENdWWVsKhikk 143 (361)
T KOG1523|consen 66 -KSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK-FAVGSGARLISVCYYEQENDWWVSKHIKK 143 (361)
T ss_pred -CCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce-EEeccCccEEEEEEEecccceehhhhhCC
Confidence 6778899999999999999666677888888899999999999999885 99999999999998886331 011234
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC---C-CceEEEecCccccEEEEEEccCCCeEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG---P-PELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~---~-~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
.+...|++++|+|++- +|++|+.|+..+|+..--...........-+ | ..++..+....+.+..+.|+|+|. .|
T Consensus 144 PirStv~sldWhpnnV-LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~-~l 221 (361)
T KOG1523|consen 144 PIRSTVTSLDWHPNNV-LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGN-RL 221 (361)
T ss_pred ccccceeeeeccCCcc-eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCC-Ee
Confidence 5678899999999987 7999999999999975332211111111111 1 122233435567899999999999 78
Q ss_pred EEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 267 CSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 267 ~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
+-.+.|.++.+-|.....+ .+.... .......+.|-.+...++.|
T Consensus 222 awv~Hds~v~~~da~~p~~~v~~~~~---~~lP~ls~~~ise~~vv~ag 267 (361)
T KOG1523|consen 222 AWVGHDSTVSFVDAAGPSERVQSVAT---AQLPLLSVSWISENSVVAAG 267 (361)
T ss_pred eEecCCCceEEeecCCCchhccchhh---ccCCceeeEeecCCceeecC
Confidence 8999999999999876642 222221 12334444554444444444
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.5e-13 Score=131.51 Aligned_cols=121 Identities=21% Similarity=0.356 Sum_probs=101.6
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..++|.++|| +++++|+|..||.|.+|.--. .+.......+.-|...|++++|+++|.+ |+||+..|.+-+|.+.++
T Consensus 206 f~~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~-LlSGG~E~VLv~Wq~~T~ 283 (792)
T KOG1963|consen 206 FNITCVALSP-NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAY-LLSGGREGVLVLWQLETG 283 (792)
T ss_pred ccceeEEecc-ccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCce-EeecccceEEEEEeecCC
Confidence 3578999999 799999999999999996543 2334566788899999999999999997 999999999999999996
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~ 229 (437)
+ .+-+..-.++|..+.++||+.. .+....|..|.+-...+....
T Consensus 284 ~--kqfLPRLgs~I~~i~vS~ds~~-~sl~~~DNqI~li~~~dl~~k 327 (792)
T KOG1963|consen 284 K--KQFLPRLGSPILHIVVSPDSDL-YSLVLEDNQIHLIKASDLEIK 327 (792)
T ss_pred C--cccccccCCeeEEEEEcCCCCe-EEEEecCceEEEEeccchhhh
Confidence 6 3445667899999999999984 777788999999988665443
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=133.39 Aligned_cols=234 Identities=15% Similarity=0.136 Sum_probs=165.1
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.=+.-.|.|+.|+ .+|.+|++||.|-.+.|||.-..+..-.+-.++. ..|.++
T Consensus 46 L~GH~GCVN~LeWn-~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHt-------------------------aNIFsv 99 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWN-ADGELLASGSDDTRLIVWDPFEYKLLHSISTGHT-------------------------ANIFSV 99 (758)
T ss_pred hccccceecceeec-CCCCEEeecCCcceEEeecchhcceeeeeecccc-------------------------cceeEE
Confidence 44556779999999 9999999999999999999765444444333433 345577
Q ss_pred EeeCC-CCCEEEEEECCCcEEEEEcCCCC-------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 110 AWHLL-HESLFGSVADDQKLMIWDTRSHN-------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 110 ~~sp~-~~~~l~~~~~dg~v~vwd~~~~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.|-|. ++.++++|..|..|+++|+.... .......+..|...|..|+-.|++++.+.++++||+|+-+|++.
T Consensus 100 KFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 100 KFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred eeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 78774 45688899999999999998421 23455667789999999999999988999999999999999997
Q ss_pred CceeeeEe---------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC----CCCCCCceEEEe-c
Q psy4571 182 LKLKLHSF---------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIH-G 247 (437)
Q Consensus 182 ~~~~~~~~---------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~-~ 247 (437)
...+.... ...--...|+..+|..++.|+.|+.|-..++||.+.......-.. ....+..++..+ .
T Consensus 180 ph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p 259 (758)
T KOG1310|consen 180 PHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSP 259 (758)
T ss_pred CccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecC
Confidence 43322211 112235689999999999999999999999999654322111100 111111122211 1
Q ss_pred Ccc-----------ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 248 GHT-----------AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 248 ~h~-----------~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
+|- ..++-+.|+|+|..+|++-+.+ .|+++|+..++....+.
T Consensus 260 ~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gE-hVYlfdvn~~~~~~~y~ 312 (758)
T KOG1310|consen 260 GHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGE-HVYLFDVNEDKSPTPYF 312 (758)
T ss_pred ccccCcccccccceeeeEEEEECCCCcEEEEeeCCe-EEEEEeecCCCCceeec
Confidence 121 1257788999999788776665 69999999887655544
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=127.57 Aligned_cols=291 Identities=11% Similarity=0.087 Sum_probs=194.0
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|.++.|+ .++..|++|+.|..+++|+....-+..+ + ..|. ....++...|.|+
T Consensus 52 ~~~H~GCiNAlqFS-~N~~~L~SGGDD~~~~~W~~de~~~~k~---~--KPI~--------------~~~~~H~SNIF~L 111 (609)
T KOG4227|consen 52 VREHTGCINALQFS-HNDRFLASGGDDMHGRVWNVDELMVRKT---P--KPIG--------------VMEHPHRSNIFSL 111 (609)
T ss_pred hhhhccccceeeec-cCCeEEeecCCcceeeeechHHHHhhcC---C--CCce--------------eccCccccceEEE
Confidence 33456678999999 7799999999999999999643211111 0 0000 1123455788899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC---CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT---AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
+|.. +...+.+|..+++|..-|+++ .+.+..+ .|. +.|..+..+|... +|++.+.+|.|.+||.+....+.
T Consensus 112 ~F~~-~N~~~~SG~~~~~VI~HDiEt---~qsi~V~-~~~~~~~~VY~m~~~P~DN-~~~~~t~~~~V~~~D~Rd~~~~~ 185 (609)
T KOG4227|consen 112 EFDL-ENRFLYSGERWGTVIKHDIET---KQSIYVA-NENNNRGDVYHMDQHPTDN-TLIVVTRAKLVSFIDNRDRQNPI 185 (609)
T ss_pred EEcc-CCeeEecCCCcceeEeeeccc---ceeeeee-cccCcccceeecccCCCCc-eEEEEecCceEEEEeccCCCCCC
Confidence 9998 788899999999999999994 3334333 343 4899999999866 69999999999999999754333
Q ss_pred eEe--ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 HSF--ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 ~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+ -......+.+-|+|..+.+|++.+..+-+.+||.+..+...... .....+........++.|+|.|.
T Consensus 186 ~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~-------~~~~~L~~~~~~~M~~~~~~~G~- 257 (609)
T KOG4227|consen 186 SLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQR-------SMFKGLPQENTEWMGSLWSPSGN- 257 (609)
T ss_pred ceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhh-------hccccCcccchhhhheeeCCCCC-
Confidence 222 23455678999999999999999999999999998865322100 00011111123346788999998
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeec-----ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh-
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSI-----RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV- 338 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~- 338 (437)
.+++--....-.+||+-+..+. .+..... ......+++|-.| ..+++|+.+-. |++|.+..
T Consensus 258 Q~msiRR~~~P~~~D~~S~R~~-V~k~D~N~~GY~N~~T~KS~~F~~D-~~v~tGSD~~~-----------i~~WklP~~ 324 (609)
T KOG4227|consen 258 QFMSIRRGKCPLYFDFISQRCF-VLKSDHNPNGYCNIKTIKSMTFIDD-YTVATGSDHWG-----------IHIWKLPRA 324 (609)
T ss_pred eehhhhccCCCEEeeeecccce-eEeccCCCCcceeeeeeeeeeeecc-eeeeccCcccc-----------eEEEecCCC
Confidence 4545545555567787764332 2222110 1112233455444 44899998877 55555532
Q ss_pred ----------------------hhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 339 ----------------------CEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 339 ----------------------~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+....+.||...+.++.|+|+...++++
T Consensus 325 ~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SS 375 (609)
T KOG4227|consen 325 NDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSS 375 (609)
T ss_pred ccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEecc
Confidence 11234569999999999999988877765
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.6e-15 Score=135.14 Aligned_cols=200 Identities=14% Similarity=0.204 Sum_probs=149.5
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
...|+.+++||.+.+.+-. .+..+...+|.+.+.+-.|+|+|.- |+++++||.|++|.-.. ....++-....+
T Consensus 75 ~d~~~i~s~DGkf~il~k~----~rVE~sv~AH~~A~~~gRW~~dGtg-Llt~GEDG~iKiWSrsG--MLRStl~Q~~~~ 147 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKS----ARVERSISAHAAAISSGRWSPDGAG-LLTAGEDGVIKIWSRSG--MLRSTVVQNEES 147 (737)
T ss_pred cceEEEEcCCceEEEeccc----chhhhhhhhhhhhhhhcccCCCCce-eeeecCCceEEEEeccc--hHHHHHhhcCce
Confidence 4578889999999988754 5666778899999999999999996 99999999999999653 213344456678
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
|+|++|.|+.+.++.+.+ +.+.|=.+.... .+...+.|.+-|.++.|+|..+ ++++|+.|-..
T Consensus 148 v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~--------------k~i~WkAHDGiiL~~~W~~~s~-lI~sgGED~kf 210 (737)
T KOG1524|consen 148 IRCARWAPNSNSIVFCQG--GHISIKPLAANS--------------KIIRWRAHDGLVLSLSWSTQSN-IIASGGEDFRF 210 (737)
T ss_pred eEEEEECCCCCceEEecC--CeEEEeeccccc--------------ceeEEeccCcEEEEeecCcccc-ceeecCCceeE
Confidence 999999999987666654 455554444432 2344889999999999999999 99999999999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDR 355 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~ 355 (437)
++||.... .+ .....+.....+++|.|+ +.++.++..- .|+- +...+.+..+
T Consensus 211 KvWD~~G~-~L---f~S~~~ey~ITSva~npd-~~~~v~S~nt------------~R~~-----------~p~~GSifnl 262 (737)
T KOG1524|consen 211 KIWDAQGA-NL---FTSAAEEYAITSVAFNPE-KDYLLWSYNT------------ARFS-----------SPRVGSIFNL 262 (737)
T ss_pred EeecccCc-cc---ccCChhccceeeeeeccc-cceeeeeeee------------eeec-----------CCCccceEEE
Confidence 99998754 22 223346778889999999 7777776542 2211 1122456777
Q ss_pred CCCCCCcccccc
Q psy4571 356 HSSDNDTEDLNS 367 (437)
Q Consensus 356 ~~~~~~~~~~~~ 367 (437)
.+++||...+..
T Consensus 263 sWS~DGTQ~a~g 274 (737)
T KOG1524|consen 263 SWSADGTQATCG 274 (737)
T ss_pred EEcCCCceeecc
Confidence 888888765543
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=134.84 Aligned_cols=233 Identities=12% Similarity=0.117 Sum_probs=177.1
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeee---------cCCCceeEEEecCCCCeEEEecCceEEEEEee--e
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWK---------KNTPFLYDLVVNNYVANISCILNISILFFEII--F 96 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~---------~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~--~ 96 (437)
.+++-+..-|||++++ .+|+++++|+.|+.|.+|+ .|+..+..+.|+|-...+....-...-+|... .
T Consensus 47 qtLKgHKDtVycVAys-~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~ 125 (1081)
T KOG1538|consen 47 QPLKGHKDTVYCVAYA-KDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKS 125 (1081)
T ss_pred cccccccceEEEEEEc-cCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhh
Confidence 4566677889999999 9999999999999999999 45677778888887776644444556677643 3
Q ss_pred ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC----cEEEEEeCCC
Q psy4571 97 TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE----YILATGSADK 172 (437)
Q Consensus 97 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~----~~l~sgs~dg 172 (437)
..+......+.+++|.- ++.+|+.|..+|+|.+-+-... ..-.+....+...+|.+++|+|... .++++.....
T Consensus 126 V~K~kss~R~~~CsWtn-DGqylalG~~nGTIsiRNk~gE-ek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~q 203 (1081)
T KOG1538|consen 126 VSKHKSSSRIICCSWTN-DGQYLALGMFNGTISIRNKNGE-EKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQ 203 (1081)
T ss_pred HHhhhhheeEEEeeecC-CCcEEEEeccCceEEeecCCCC-cceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccc
Confidence 44455667889999998 7899999999999999865422 1222333445678999999998532 2688888888
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (437)
++..+.+.. +. +..-+.-.-...|+.+.|+|.+ +..|+.|+.+++|.... ..+.+......+
T Consensus 204 TLSFy~LsG-~~-Igk~r~L~FdP~CisYf~NGEy-~LiGGsdk~L~~fTR~G---------------vrLGTvg~~D~W 265 (1081)
T KOG1538|consen 204 TLSFYQLSG-KQ-IGKDRALNFDPCCISYFTNGEY-ILLGGSDKQLSLFTRDG---------------VRLGTVGEQDSW 265 (1081)
T ss_pred eeEEEEecc-ee-ecccccCCCCchhheeccCCcE-EEEccCCCceEEEeecC---------------eEEeecccccee
Confidence 888888874 32 3333334456689999999996 67888899999997654 234445556779
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 253 ISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
|+.++..|+++ .++.|+.||+|..|++-.
T Consensus 266 IWtV~~~PNsQ-~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 266 IWTVQAKPNSQ-YVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred EEEEEEccCCc-eEEEEEccCeeehhhhHH
Confidence 99999999999 688999999999998753
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-14 Score=118.82 Aligned_cols=207 Identities=16% Similarity=0.130 Sum_probs=145.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC-------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN-------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
.|..-+|+| .+.+|++|..+|.|.+..+.... ....+...++|.++|..++|. .. +|++|+ ||.|+=|
T Consensus 12 tvf~qa~sp-~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~-~Lls~g-dG~V~gw 86 (325)
T KOG0649|consen 12 TVFAQAISP-SKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DD-FLLSGG-DGLVYGW 86 (325)
T ss_pred HHHHHhhCC-cceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hh-heeecc-CceEEEe
Confidence 455667899 68899999999999999886421 123455568999999999998 33 367766 4999999
Q ss_pred eCCCCce-----eeeE--eccCC-----CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 178 DLRNLKL-----KLHS--FESHK-----DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 178 d~~~~~~-----~~~~--~~~h~-----~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
..+...+ ++.. ...|. ..|+++...|..+. ++.++.|+.++.||++++. ..+.
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS-i~~AgGD~~~y~~dlE~G~--------------i~r~ 151 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS-ILFAGGDGVIYQVDLEDGR--------------IQRE 151 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc-EEEecCCeEEEEEEecCCE--------------EEEE
Confidence 8764322 0111 11122 35889999998876 4555579999999999974 4456
Q ss_pred ecCccccEEEEEE-ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc-----CCceeeeecCCCCcccccCCCCc
Q psy4571 246 HGGHTAKISDFSW-NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS-----NGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 246 ~~~h~~~v~~l~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
++||++.|.++.- +..++ +.+|+.||++|+||.+++++.+.+....... .+....+..-+..+++-|+.-.
T Consensus 152 ~rGHtDYvH~vv~R~~~~q--ilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~- 228 (325)
T KOG0649|consen 152 YRGHTDYVHSVVGRNANGQ--ILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPK- 228 (325)
T ss_pred EcCCcceeeeeeecccCcc--eeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCCCc-
Confidence 8999999999998 44444 6699999999999999999988877543211 1222234445556666555332
Q ss_pred ccccccccccccccccchhhhhhhhh
Q psy4571 320 NSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
..+|.+...+....+
T Consensus 229 -----------lslwhLrsse~t~vf 243 (325)
T KOG0649|consen 229 -----------LSLWHLRSSESTCVF 243 (325)
T ss_pred -----------eeEEeccCCCceEEE
Confidence 577888776665444
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-15 Score=131.20 Aligned_cols=195 Identities=19% Similarity=0.162 Sum_probs=142.5
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.+++|++ ++..+++|+.||++|||+.. ....+.....|.+.|.++.|+|||+. |++-+.| ..++|+.+++.. +
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~P---s~~t~l~e~~~~~eV~DL~FS~dgk~-lasig~d-~~~VW~~~~g~~-~ 220 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWP---SMLTILEEIAHHAEVKDLDFSPDGKF-LASIGAD-SARVWSVNTGAA-L 220 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecC---cchhhhhhHhhcCccccceeCCCCcE-EEEecCC-ceEEEEeccCch-h
Confidence 5899999 68899999999999999966 35566677789999999999999995 9999999 999999999633 4
Q ss_pred eEec--cCCCceEEEEEcCCC---Cc-EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 187 HSFE--SHKDEIFQVQWSPHN---ET-ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 187 ~~~~--~h~~~v~~v~~~p~~---~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.... .-......+.|+.++ .. +++....-+.|+.||+..-.....+ ..+........|++++.++
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l---------~~~~~~~~~~siSsl~VS~ 291 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL---------RLRKKIKRFKSISSLAVSD 291 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc---------chhhhhhccCcceeEEEcC
Confidence 4333 222345677787665 21 3333344566777776543221110 0111122234799999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+|+ +++.|+.||.|.|++..+.+..+..+ ..|...+..+.|+||.+++++-+.+..+
T Consensus 292 dGk-f~AlGT~dGsVai~~~~~lq~~~~vk--~aH~~~VT~ltF~Pdsr~~~svSs~~~~ 348 (398)
T KOG0771|consen 292 DGK-FLALGTMDGSVAIYDAKSLQRLQYVK--EAHLGFVTGLTFSPDSRYLASVSSDNEA 348 (398)
T ss_pred CCc-EEEEeccCCcEEEEEeceeeeeEeeh--hhheeeeeeEEEcCCcCcccccccCCce
Confidence 999 89999999999999999876655443 3455667778999999999998877663
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=128.69 Aligned_cols=187 Identities=17% Similarity=0.150 Sum_probs=136.2
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.+++|+++|. .+++|+.||++|+|+..+... +.....|.+.|.++.|+|||+ +|++-+.| ..+||+.+++...+..
T Consensus 148 k~vaf~~~gs-~latgg~dg~lRv~~~Ps~~t-~l~e~~~~~eV~DL~FS~dgk-~lasig~d-~~~VW~~~~g~~~a~~ 223 (398)
T KOG0771|consen 148 KVVAFNGDGS-KLATGGTDGTLRVWEWPSMLT-ILEEIAHHAEVKDLDFSPDGK-FLASIGAD-SARVWSVNTGAALARK 223 (398)
T ss_pred eEEEEcCCCC-EeeeccccceEEEEecCcchh-hhhhHhhcCccccceeCCCCc-EEEEecCC-ceEEEEeccCchhhhc
Confidence 7899999999 599999999999999776454 556667999999999999998 58888888 9999999998665553
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCC---C-eEEEEEeCCCeEEEEeCCCCCCceeee--eeecccCCceeeeecC
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNE---P-WVICSVSEDNIMQEYCDSTDSDTKTMR--LDSIRSNGGISSTASP 306 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~s~ 306 (437)
.+ ..-+.....+.|+.++ . ++++....-+.|+.||+...+.-..++ .......+..+++.|+
T Consensus 224 t~------------~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~ 291 (398)
T KOG0771|consen 224 TP------------FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSD 291 (398)
T ss_pred CC------------cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcC
Confidence 21 1223345566777665 2 133334455677777765443211111 1111345677889999
Q ss_pred CCCcccccCCCCcccccccccccccccccchhhhhhhhh-cCCCccccccCCCCCCccccc
Q psy4571 307 TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL-LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 307 ~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~-~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+|++++.|+.+|. +-+++..+-+.+... ..|...|+.+.|+|+.+.+.+
T Consensus 292 dGkf~AlGT~dGs-----------Vai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 292 DGKFLALGTMDGS-----------VAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred CCcEEEEeccCCc-----------EEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence 9999999999999 666777666655444 678889999999998876655
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=121.78 Aligned_cols=240 Identities=15% Similarity=0.192 Sum_probs=168.9
Q ss_pred cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc-----cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC-
Q psy4571 64 KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP-----FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN- 137 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~- 137 (437)
.+.+.+....|.......+....|.+.+|+++..+..+ ....|+.+.--| + ..+.+-+.|+.+.+|++.-..
T Consensus 12 p~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p-~-d~l~tqgRd~~L~lw~ia~s~~ 89 (323)
T KOG0322|consen 12 PHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIP-N-DSLDTQGRDPLLILWTIAYSAF 89 (323)
T ss_pred cccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecC-C-cchhhcCCCceEEEEEccCcce
Confidence 45566666766666666677888999999998766543 234667777777 3 567788889999999886410
Q ss_pred --------------------CCCCe---e----------------------ee----ccCCCCeEEEEEeC-C-CCcEEE
Q psy4571 138 --------------------VSKPS---H----------------------TV----DAHTAEVNCLSFNP-Y-SEYILA 166 (437)
Q Consensus 138 --------------------~~~~~---~----------------------~~----~~h~~~v~~l~~~~-~-~~~~l~ 166 (437)
..+.. . .. .+..+.+.|..+.- + ...+++
T Consensus 90 i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lll 169 (323)
T KOG0322|consen 90 ISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLL 169 (323)
T ss_pred EEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEE
Confidence 00000 0 00 01234566666432 2 334678
Q ss_pred EEeCCCeEEEEeCCCCcee---------eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLK---------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~---------~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.|.++|.+.+||+.++... ......|..+|.++.+.+.-.. =++|+.+..+..|.+.........
T Consensus 170 aGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~r-Gisgga~dkl~~~Sl~~s~gslq~----- 243 (323)
T KOG0322|consen 170 AGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDR-GISGGADDKLVMYSLNHSTGSLQI----- 243 (323)
T ss_pred EeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcC-CcCCCccccceeeeeccccCcccc-----
Confidence 8999999999999985321 2234568999999999876543 468888888999988754211110
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
..- ..-.+-.|..+..-||++ ++||++.|+.||+|+-++..++..+.. |..++..++|+|+..++|+++.|
T Consensus 244 ---~~e--~~lknpGv~gvrIRpD~K-IlATAGWD~RiRVyswrtl~pLAVLky---Hsagvn~vAfspd~~lmAaaskD 314 (323)
T KOG0322|consen 244 ---RKE--ITLKNPGVSGVRIRPDGK-ILATAGWDHRIRVYSWRTLNPLAVLKY---HSAGVNAVAFSPDCELMAAASKD 314 (323)
T ss_pred ---cce--EEecCCCccceEEccCCc-EEeecccCCcEEEEEeccCCchhhhhh---hhcceeEEEeCCCCchhhhccCC
Confidence 001 111123578899999999 999999999999999999998888775 56788889999999999999999
Q ss_pred Ccc
Q psy4571 318 PTN 320 (437)
Q Consensus 318 ~~~ 320 (437)
..+
T Consensus 315 ~rI 317 (323)
T KOG0322|consen 315 ARI 317 (323)
T ss_pred ceE
Confidence 993
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-13 Score=120.71 Aligned_cols=216 Identities=13% Similarity=0.186 Sum_probs=141.4
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CC----------CeeeeccCCCCeEEEEEeCCCCcEEEEEeC-
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SK----------PSHTVDAHTAEVNCLSFNPYSEYILATGSA- 170 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~----------~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~- 170 (437)
...|+|++|-|.....|+.|+..| |.+|....... .+ .+..-.+| .+|+++.|.+||.. +++++.
T Consensus 140 QrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~-l~tAS~g 216 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTI-LVTASFG 216 (445)
T ss_pred hcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCE-EeecccC
Confidence 467899999999889999999776 88998753211 11 12223355 58999999999995 777765
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
|..|.|||.+++.. +.....-.+.++-+.|+|||.+ |.++.-|+..++|+....--... ..--.
T Consensus 217 sssi~iWdpdtg~~-~pL~~~glgg~slLkwSPdgd~-lfaAt~davfrlw~e~q~wt~er--------------w~lgs 280 (445)
T KOG2139|consen 217 SSSIMIWDPDTGQK-IPLIPKGLGGFSLLKWSPDGDV-LFAATCDAVFRLWQENQSWTKER--------------WILGS 280 (445)
T ss_pred cceEEEEcCCCCCc-ccccccCCCceeeEEEcCCCCE-EEEecccceeeeehhcccceecc--------------eeccC
Confidence 67899999998664 3322234577899999999996 66778899999996544321111 11123
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc-------eeee------------eeecccCCceeeeecCCCCcc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT-------KTMR------------LDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~~~------------~~~~~~~~~~~~~~s~~g~~l 311 (437)
+.|..-.|+|+|+.+|.+++..-.++--........ +... ......+....++|.|.|.++
T Consensus 281 grvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyL 360 (445)
T KOG2139|consen 281 GRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYL 360 (445)
T ss_pred CceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEE
Confidence 489999999999988888887766554433321111 0000 111123456778999999999
Q ss_pred cccCCCCcccccccccccccccccchhhh
Q psy4571 312 ASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 312 ~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
|+--..+.... +....|..||...--
T Consensus 361 av~fKg~~~v~---~~k~~i~~fdtr~sp 386 (445)
T KOG2139|consen 361 AVIFKGQSFVL---LCKLHISRFDTRKSP 386 (445)
T ss_pred EEEEcCCchhh---hhhhhhhhhcccccC
Confidence 98765443111 111126667765443
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.3e-13 Score=113.89 Aligned_cols=226 Identities=12% Similarity=0.135 Sum_probs=152.6
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEec--------CceEEEEEeeec
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCIL--------NISILFFEIIFT 97 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~--------~~~i~~~~~~~~ 97 (437)
..+++|+ ++..-++.|-.+| .||++.+- +...-..+......+.-.+ ...+.|||-...
T Consensus 8 ~lsvs~N-QD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 8 TLSVSFN-QDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred eeEEEEc-cCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 3458899 8888887776555 69988431 1111111111122222222 236999994332
Q ss_pred ---cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 98 ---QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 98 ---~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
..+.+..+|.++.+.+ ..+++.- .+.|.||...+. .+.++.+.. ....+.+++-......+..-|-.-|
T Consensus 86 ~~i~el~f~~~I~~V~l~r---~riVvvl-~~~I~VytF~~n--~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~G 159 (346)
T KOG2111|consen 86 RCIIELSFNSEIKAVKLRR---DRIVVVL-ENKIYVYTFPDN--PKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTG 159 (346)
T ss_pred cEEEEEEeccceeeEEEcC---CeEEEEe-cCeEEEEEcCCC--hhheeeeecccCCCceEeecCCCCceEEEcCCCccc
Confidence 2456788999999987 2344443 678999998743 233433332 2233555544444443333455679
Q ss_pred eEEEEeCCCCce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 173 TVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 173 ~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.|+|-|+...+. +...+.+|...|.|++++-+|. ++||+|..|+ |||||..++....+. ......
T Consensus 160 qvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt-~vATaStkGTLIRIFdt~~g~~l~E~------------RRG~d~ 226 (346)
T KOG2111|consen 160 QVQIVDLASTKPNAPSIINAHDSDIACVALNLQGT-LVATASTKGTLIRIFDTEDGTLLQEL------------RRGVDR 226 (346)
T ss_pred eEEEEEhhhcCcCCceEEEcccCceeEEEEcCCcc-EEEEeccCcEEEEEEEcCCCcEeeee------------ecCCch
Confidence 999999987543 3467889999999999999998 7999999998 899999998766552 122334
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
..|.+|+|+|+.. +|+..|.-|++.|+.++...
T Consensus 227 A~iy~iaFSp~~s-~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 227 ADIYCIAFSPNSS-WLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred heEEEEEeCCCcc-EEEEEcCCCeEEEEEeecCC
Confidence 6799999999999 78899999999999987643
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=135.58 Aligned_cols=258 Identities=14% Similarity=0.164 Sum_probs=171.5
Q ss_pred eeEEEecCCCCeEEEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee
Q psy4571 69 LYDLVVNNYVANISCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144 (437)
Q Consensus 69 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 144 (437)
++++++.|++..+....+..+.++|...+.. ..|+..|+|++|+. ++..||+|+.|..|.+|+.+-. ..++.
T Consensus 15 i~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~-dGkrFASG~aDK~VI~W~~klE---G~LkY 90 (1081)
T KOG1538|consen 15 INDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK-DGKRFASGSADKSVIIWTSKLE---GILKY 90 (1081)
T ss_pred hheeEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEcc-CCceeccCCCceeEEEeccccc---ceeee
Confidence 3444444444444444444444444332221 23667899999999 7899999999999999998732 22222
Q ss_pred eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC
Q psy4571 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 145 ~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~ 224 (437)
.|...|.|+.|+|-... |++++-. ..-+|.... +. +...+ ....+.+.+|..||++ ++.|-.||+|.+-+-.
T Consensus 91 --SH~D~IQCMsFNP~~h~-LasCsLs-dFglWS~~q-K~-V~K~k-ss~R~~~CsWtnDGqy-lalG~~nGTIsiRNk~ 162 (1081)
T KOG1538|consen 91 --SHNDAIQCMSFNPITHQ-LASCSLS-DFGLWSPEQ-KS-VSKHK-SSSRIICCSWTNDGQY-LALGMFNGTISIRNKN 162 (1081)
T ss_pred --ccCCeeeEeecCchHHH-hhhcchh-hccccChhh-hh-HHhhh-hheeEEEeeecCCCcE-EEEeccCceEEeecCC
Confidence 68999999999999885 8888764 356888775 22 32222 3567899999999985 9999999999886443
Q ss_pred CCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC----eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP----WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
.... -.+....|.+++|.+++|+|... .+++......++.++.+... .+.. ...-.-.+.
T Consensus 163 gEek------------~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~-~Igk---~r~L~FdP~ 226 (1081)
T KOG1538|consen 163 GEEK------------VKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK-QIGK---DRALNFDPC 226 (1081)
T ss_pred CCcc------------eEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecce-eecc---cccCCCCch
Confidence 3211 22344556788999999998642 47888888899999988743 2221 111233456
Q ss_pred eeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 301 SSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 301 ~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++.+-++|.++..|+.|+..+++.+. |..+.++.....-+..+...|+++.+..
T Consensus 227 CisYf~NGEy~LiGGsdk~L~~fTR~------------GvrLGTvg~~D~WIWtV~~~PNsQ~v~~ 280 (1081)
T KOG1538|consen 227 CISYFTNGEYILLGGSDKQLSLFTRD------------GVRLGTVGEQDSWIWTVQAKPNSQYVVV 280 (1081)
T ss_pred hheeccCCcEEEEccCCCceEEEeec------------CeEEeeccccceeEEEEEEccCCceEEE
Confidence 67889999999999999986665432 3333444344445555566666654443
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.2e-13 Score=131.01 Aligned_cols=232 Identities=25% Similarity=0.346 Sum_probs=171.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEE-eCCCCcEEEEE-eCCCeEEEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSF-NPYSEYILATG-SADKTVALW 177 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~-~~~~~~~l~sg-s~dg~i~lw 177 (437)
.+...+.++.+.+ .+..++.++.|+.+.+|+..... ..+..+..+. ..+..+.+ ++++..+++.. ..|+.+.+|
T Consensus 63 ~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 63 GHEDSITSIAFSP-DGELLLSGSSDGTIKLWDLDNGE--KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eccceEEEEEECC-CCcEEEEecCCCcEEEEEcCCCc--eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 3456788899998 67788888899999999998432 2555555544 36777777 77777334444 449999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
|..........+..|...|..++|+|+++ .+++++. |+.+++|++... ..+..+.+|...|.++
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~v~~~ 204 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGK-LLASGSSLDGTIKLWDLRTG--------------KPLSTLAGHTDPVSSL 204 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCCC-EEEecCCCCCceEEEEcCCC--------------ceEEeeccCCCceEEE
Confidence 99972333777888999999999999998 4777775 999999999873 3345567799999999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCcccccCCCCccccccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFD 335 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd 335 (437)
+|+|+++.++++++.|+.+++||...+..... +.. +.... ...|+|++..+++++.++. +++||
T Consensus 205 ~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~d~~-----------~~~~~ 269 (466)
T COG2319 205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSG---HSDSV-VSSFSPDGSLLASGSSDGT-----------IRLWD 269 (466)
T ss_pred EEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCC---CCcce-eEeECCCCCEEEEecCCCc-----------EEEee
Confidence 99999984555569999999998886655542 222 22222 2289999988889999998 78888
Q ss_pred chhhhh-hhhhcCCCccccccCCCCCCcccc
Q psy4571 336 ILVCEE-QRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 336 ~~~~~~-~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
...... ...+.+|...+..+.+.|++..+.
T Consensus 270 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 300 (466)
T COG2319 270 LRSSSSLLRTLSGHSSSVLSVAFSPDGKLLA 300 (466)
T ss_pred ecCCCcEEEEEecCCccEEEEEECCCCCEEE
Confidence 876654 333367777888888887554444
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-13 Score=120.58 Aligned_cols=236 Identities=15% Similarity=0.113 Sum_probs=173.6
Q ss_pred ceeEEEEeeC-CCcceEEEeeccCceEeeecCCCc-----------------eeEEEecCCCCeEEEecCceEEEEEeee
Q psy4571 35 YRFYRLCVAE-PFDDAVEERVINEEYKIWKKNTPF-----------------LYDLVVNNYVANISCILNISILFFEIIF 96 (437)
Q Consensus 35 ~~v~~~~~~~-~~~~~l~tgs~d~~v~iw~~~~~~-----------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~ 96 (437)
.++..++|.. +..+.+...+.|..+......... +.++. ..+...++|..+|.+.+|....
T Consensus 56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~-~~dg~Litc~~sG~l~~~~~k~ 134 (412)
T KOG3881|consen 56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLK-LADGTLITCVSSGNLQVRHDKS 134 (412)
T ss_pred hhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchh-hcCCEEEEEecCCcEEEEeccC
Confidence 4455666653 334555555566666655533222 22221 1233456999999999998774
Q ss_pred ccc-------cccCCCcceEEeeCCCCCEEEEEECC--CcEEEEEcCCCCCCCCeeeeccC---------CCCeEEEEEe
Q psy4571 97 TQN-------FPFPLSRQDVAWHLLHESLFGSVADD--QKLMIWDTRSHNVSKPSHTVDAH---------TAEVNCLSFN 158 (437)
Q Consensus 97 ~~~-------~~~~~~v~~~~~sp~~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~~~~h---------~~~v~~l~~~ 158 (437)
+.. ......+..+.=+|....++|+|+.. ..+.+||++.. +++..-+.- .-.++++.|-
T Consensus 135 ~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~---~qiw~aKNvpnD~L~LrVPvW~tdi~Fl 211 (412)
T KOG3881|consen 135 GDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS---KQIWSAKNVPNDRLGLRVPVWITDIRFL 211 (412)
T ss_pred CccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccc---eeeeeccCCCCccccceeeeeeccceec
Confidence 431 22345667777788778889999999 89999999843 333222211 1236678887
Q ss_pred CC--CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 159 PY--SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 159 ~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
+. .. .|++++.-+.+++||.+..+.|+..+.--..+++++...|.++ ++++|..-+.+..||++.+....
T Consensus 212 ~g~~~~-~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn-~Iy~gn~~g~l~~FD~r~~kl~g------ 283 (412)
T KOG3881|consen 212 EGSPNY-KFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGN-FIYTGNTKGQLAKFDLRGGKLLG------ 283 (412)
T ss_pred CCCCCc-eEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCc-EEEEecccchhheecccCceeec------
Confidence 75 44 5999999999999999999999999888889999999999998 58899999999999999875322
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
..+.+-.+.+++|..+|.++ +++++|.|..+||+|+.+.+.+....
T Consensus 284 -------~~~kg~tGsirsih~hp~~~-~las~GLDRyvRIhD~ktrkll~kvY 329 (412)
T KOG3881|consen 284 -------CGLKGITGSIRSIHCHPTHP-VLASCGLDRYVRIHDIKTRKLLHKVY 329 (412)
T ss_pred -------cccCCccCCcceEEEcCCCc-eEEeeccceeEEEeecccchhhhhhh
Confidence 22678889999999999999 89999999999999999976665544
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.4e-13 Score=129.99 Aligned_cols=236 Identities=12% Similarity=0.086 Sum_probs=149.1
Q ss_pred eEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEE---CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVA---DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~---~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
.|.++|....... .....+...+|+| ++..|+..+ .+..|.+|++.+++ .+.+..+ .+.+...+|+|||
T Consensus 180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~-~~~l~~~---~~~~~~~~~SPDG 254 (429)
T PRK03629 180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGA-VRQVASF---PRHNGAPAFSPDG 254 (429)
T ss_pred eEEEEcCCCCCCEEeecCCCceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCC-eEEccCC---CCCcCCeEECCCC
Confidence 5777775433221 2344688999999 566666443 23578999987432 1222223 3345568999999
Q ss_pred CcEEEEEeCCC--eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEE--EcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW--DLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vw--d~~~~~~~~~~~~~~~ 237 (437)
+.++++.+.+| .|.+||+++++ ...+..+...+....|+|+|+.++++...++...+| |+.++..
T Consensus 255 ~~La~~~~~~g~~~I~~~d~~tg~--~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~--------- 323 (429)
T PRK03629 255 SKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP--------- 323 (429)
T ss_pred CEEEEEEcCCCCcEEEEEECCCCC--EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe---------
Confidence 97555556565 48889998754 344444556778899999999754554445554555 5554321
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCC--CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..+..+........|+|+|+.+++++..+ ..|.+||+.+++. ..+.. ........|+|||+.++..+
T Consensus 324 ------~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~----~~~~~~p~~SpDG~~i~~~s 392 (429)
T PRK03629 324 ------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTD----TFLDETPSIAPNGTMVIYSS 392 (429)
T ss_pred ------EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCC----CCCCCCceECCCCCEEEEEE
Confidence 11222233456788999999555544433 4588899988753 22221 11234568999999999888
Q ss_pred CCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
.++.. ..+.++++ +|+..+.+.+|...+....++|
T Consensus 393 ~~~~~--------~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 393 SQGMG--------SVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred cCCCc--------eEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 76542 12566676 5666777888877777777776
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-13 Score=114.66 Aligned_cols=159 Identities=18% Similarity=0.373 Sum_probs=104.5
Q ss_pred ceEEeeCCCCCEEEEEEC---------CCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEE-EEEeCCCeEE
Q psy4571 107 QDVAWHLLHESLFGSVAD---------DQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYIL-ATGSADKTVA 175 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~---------dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l-~sgs~dg~i~ 175 (437)
-.+.|+|.+..+++.... -|...+|.++..+ .+...+. ...++|.+++|+|+|..++ +.|..++.|.
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~--~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ 86 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN--IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVT 86 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC--CccceeeccCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence 357788854444444441 2446666664322 2333332 2345799999999999733 3345678999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC---CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT---DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (437)
+||++. +. +..+. ...++.+.|+|+|++ +++|+. .|.|.+||+++.+.... . .| ..
T Consensus 87 lyd~~~-~~-i~~~~--~~~~n~i~wsP~G~~-l~~~g~~n~~G~l~~wd~~~~~~i~~--------------~-~~-~~ 145 (194)
T PF08662_consen 87 LYDVKG-KK-IFSFG--TQPRNTISWSPDGRF-LVLAGFGNLNGDLEFWDVRKKKKIST--------------F-EH-SD 145 (194)
T ss_pred EEcCcc-cE-eEeec--CCCceEEEECCCCCE-EEEEEccCCCcEEEEEECCCCEEeec--------------c-cc-Cc
Confidence 999973 33 55553 567889999999996 666553 46799999996543322 2 23 35
Q ss_pred EEEEEEccCCCeEEEEEe-----CCCeEEEEeCCCCCCceee
Q psy4571 253 ISDFSWNPNEPWVICSVS-----EDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~ 289 (437)
++.++|+|+|++++.+.+ .|+.++||+.. |+.+...
T Consensus 146 ~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 146 ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred EEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEec
Confidence 789999999996554444 38999999986 5554443
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=7e-13 Score=132.46 Aligned_cols=266 Identities=15% Similarity=0.101 Sum_probs=168.6
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
..+...|..+|.+++.+.+++|||.||+||+|+...-......+ .+..-|+ +...++.++.
T Consensus 1045 ~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~------------rS~ltys-------~~~sr~~~vt 1105 (1431)
T KOG1240|consen 1045 HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSA------------RSELTYS-------PEGSRVEKVT 1105 (1431)
T ss_pred hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCccee------------eeeEEEe-------ccCCceEEEE
Confidence 34444566788887777999999999999999943200000000 0000010 1235667788
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCC----CeeeeccC-CCC-eEEEEEeCCC-CcEEEEEeCCCeEEEEeCCCCc
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSK----PSHTVDAH-TAE-VNCLSFNPYS-EYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~----~~~~~~~h-~~~-v~~l~~~~~~-~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+ +++.+|.+++||.|++.+++.....+ ..+....+ .+. |..-+|.... ..+++.+..-+.|..||+++..
T Consensus 1106 ~~~-~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~ 1184 (1431)
T KOG1240|consen 1106 MCG-NGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRH 1184 (1431)
T ss_pred ecc-CCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhh
Confidence 888 78899999999999999987421111 11112222 222 3344444332 2368889999999999999744
Q ss_pred eeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 184 LKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 184 ~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
. ...++ ...+.|++++.+|.+. .+++|...|.+.+||++-....... ..++..+++.+..+|-
T Consensus 1185 ~-~w~lk~~~~hG~vTSi~idp~~~-WlviGts~G~l~lWDLRF~~~i~sw-------------~~P~~~~i~~v~~~~~ 1249 (1431)
T KOG1240|consen 1185 D-AWRLKNQLRHGLVTSIVIDPWCN-WLVIGTSRGQLVLWDLRFRVPILSW-------------EHPARAPIRHVWLCPT 1249 (1431)
T ss_pred h-HHhhhcCccccceeEEEecCCce-EEEEecCCceEEEEEeecCceeecc-------------cCcccCCcceEEeecc
Confidence 3 33332 2347899999999998 5999999999999999986554442 2344567888887764
Q ss_pred CC---eEEEEEe-CCCeEEEEeCCCCCCceeeeeee----------------cccCCceeeeecCCCCcccccCCCCccc
Q psy4571 262 EP---WVICSVS-EDNIMQEYCDSTDSDTKTMRLDS----------------IRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 262 ~~---~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.+ ..+.+++ ..+.|.+|++.+|.+...+.... ........+.+...+.++.+|+.|..
T Consensus 1250 ~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~k-- 1327 (1431)
T KOG1240|consen 1250 YPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMK-- 1327 (1431)
T ss_pred CCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccc--
Confidence 43 3454555 68899999999996655554320 00111122233333445666666666
Q ss_pred ccccccccccccccchhhhhh
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~ 342 (437)
|+.||..+.+..
T Consensus 1328 ---------IR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1328 ---------IRKWDPTRPEIS 1339 (1431)
T ss_pred ---------eeeccCCCcccc
Confidence 899999887655
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=118.20 Aligned_cols=162 Identities=16% Similarity=0.298 Sum_probs=110.8
Q ss_pred EEEEEeCCCCcEEEEEeC---------CCeEEEEeCCCCceeeeEecc-CCCceEEEEEcCCCCcEEEE-EeCCCeEEEE
Q psy4571 153 NCLSFNPYSEYILATGSA---------DKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILAS-SGTDRRLHVW 221 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~---------dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s-g~~dg~i~vw 221 (437)
..+.|+|+|.++++.... -|...+|.++....+...+.- ..++|.+++|+|+|+.+++. |..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 468899999986666652 244666666543443444432 34579999999999874333 4567899999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe---CCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS---EDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
|++. +.+..+. ...+..|.|+|+|+ ++++++ ..|.+.+||+++.+.+.... +..
T Consensus 89 d~~~---------------~~i~~~~--~~~~n~i~wsP~G~-~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-----~~~ 145 (194)
T PF08662_consen 89 DVKG---------------KKIFSFG--TQPRNTISWSPDGR-FLVLAGFGNLNGDLEFWDVRKKKKISTFE-----HSD 145 (194)
T ss_pred cCcc---------------cEeEeec--CCCceEEEECCCCC-EEEEEEccCCCcEEEEEECCCCEEeeccc-----cCc
Confidence 9963 2233343 45778999999999 555554 34779999999776665543 345
Q ss_pred ceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 299 GISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
...++|||||+++++++.....+ ....+++|+. +|+++.
T Consensus 146 ~t~~~WsPdGr~~~ta~t~~r~~-----~dng~~Iw~~-~G~~l~ 184 (194)
T PF08662_consen 146 ATDVEWSPDGRYLATATTSPRLR-----VDNGFKIWSF-QGRLLY 184 (194)
T ss_pred EEEEEEcCCCCEEEEEEecccee-----ccccEEEEEe-cCeEeE
Confidence 67889999999999987653322 2233899998 466543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.5e-13 Score=128.62 Aligned_cols=236 Identities=15% Similarity=0.066 Sum_probs=145.6
Q ss_pred eEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
.|.+||....... .....+...+|+| +++.|+.++.+ ..|.+||+..+ +. ..+..+.+...+.+|+|+|
T Consensus 185 ~l~i~D~~g~~~~~lt~~~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g---~~-~~l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 185 ALQVADSDGYNPQTILRSAEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATG---QR-ELVASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEECCCCCCceEeecCCCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCC---CE-EEeccCCCCccCceECCCC
Confidence 5788886433222 2345688999999 56677666533 46999999743 22 2233334455678999999
Q ss_pred CcEEEEEeCCC--eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe--EEEEEcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~ 237 (437)
+.++++.+.+| .|.+||+.+++ ...+..+.......+|+|+|+.++++...+|. |.++|+.+++..
T Consensus 260 ~~l~~~~s~~g~~~Iy~~d~~~g~--~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-------- 329 (433)
T PRK04922 260 RRLALTLSRDGNPEIYVMDLGSRQ--LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-------- 329 (433)
T ss_pred CEEEEEEeCCCCceEEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE--------
Confidence 98666777766 49999998755 44555565556788999999975555545555 566666553211
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
. +..+.......+|+|+|+.++++...++ .|.+||+.+++.. .+. .........|+|||+.++..+
T Consensus 330 ----~---lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt----~~~~~~~p~~spdG~~i~~~s 397 (433)
T PRK04922 330 ----R---LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT----PGSLDESPSFAPNGSMVLYAT 397 (433)
T ss_pred ----E---eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC----CCCCCCCceECCCCCEEEEEE
Confidence 1 1112223456899999995554443333 6999999877543 222 112334568999999887765
Q ss_pred CCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
.++. ...+.++|.. |...+.+..+...+....++|
T Consensus 398 ~~~g--------~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 398 REGG--------RGVLAAVSTD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred ecCC--------ceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence 5321 1126667773 445555555544455555554
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-12 Score=123.97 Aligned_cols=245 Identities=10% Similarity=0.139 Sum_probs=167.2
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecC---------------CCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN---------------TPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~---------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
-.++.+.+.+.+++ |.++.+++|-.||.|.+|+.- ...+..+.|+.++..+ +.+..+.+.+|.
T Consensus 201 ~~~Htf~~t~~~~s-pn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq 279 (792)
T KOG1963|consen 201 TVHHTFNITCVALS-PNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQ 279 (792)
T ss_pred hhhhcccceeEEec-cccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEe
Confidence 34556668899999 999999999999999999932 2356777787888777 677788999999
Q ss_pred eeeccccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--------cCCCCeEEEEEeCCCC
Q psy4571 94 IIFTQNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--------AHTAEVNCLSFNPYSE 162 (437)
Q Consensus 94 ~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~ 162 (437)
+....+.- ...+|..+.++| ++.+.+....|+.|.+....+......+..+. ...+-.+.++++|.-.
T Consensus 280 ~~T~~kqfLPRLgs~I~~i~vS~-ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~ 358 (792)
T KOG1963|consen 280 LETGKKQFLPRLGSPILHIVVSP-DSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN 358 (792)
T ss_pred ecCCCcccccccCCeeEEEEEcC-CCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCC
Confidence 87766432 456899999999 67788888889999998875321111111111 1123355666777433
Q ss_pred cEEEEEeCCCeEEEEeCCCCce----------------------------------------------------------
Q psy4571 163 YILATGSADKTVALWDLRNLKL---------------------------------------------------------- 184 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~---------------------------------------------------------- 184 (437)
.++-.+..|.|++||+.+...
T Consensus 359 -~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~ 437 (792)
T KOG1963|consen 359 -SLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQY 437 (792)
T ss_pred -ceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEE
Confidence 266666677777777654220
Q ss_pred ---------eeeEeccCCCceEEEEEcCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 185 ---------KLHSFESHKDEIFQVQWSPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 185 ---------~~~~~~~h~~~v~~v~~~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.......|...+...++.+. ....+++++.||.+++|-+...+.... ....+.+...-.-|..+++
T Consensus 438 n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k----~~s~W~c~~i~sy~k~~i~ 513 (792)
T KOG1963|consen 438 NPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYK----KSSNWTCKAIGSYHKTPIT 513 (792)
T ss_pred cCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCc----CccceEEeeeeccccCccc
Confidence 00111235555455555433 221578999999999999966554332 1223444444445888999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+.+|+.||. +++.+.|++|.+||..+.
T Consensus 514 a~~fs~dGs--lla~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 514 ALCFSQDGS--LLAVSFDDTITIWDYDTK 540 (792)
T ss_pred chhhcCCCc--EEEEecCCEEEEecCCCh
Confidence 999999997 557889999999999984
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-13 Score=129.29 Aligned_cols=224 Identities=13% Similarity=0.041 Sum_probs=141.7
Q ss_pred cCceEeeecC----------CCceeEEEecCCCCeEEEec----CceEEEEEeeecccc---ccCCCcceEEeeCCCCCE
Q psy4571 56 NEEYKIWKKN----------TPFLYDLVVNNYVANISCIL----NISILFFEIIFTQNF---PFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 56 d~~v~iw~~~----------~~~~~~~~~~~~~~~i~~~~----~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~ 118 (437)
+..+.+||.. ...+....|++++..+.... +..|.+||+..++.. ..+.....++|+| +++.
T Consensus 183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSP-DG~~ 261 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSP-DGSR 261 (429)
T ss_pred eEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECC-CCCE
Confidence 3567777633 23466778888888775542 236999998655421 1333456799999 5666
Q ss_pred EEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceE
Q psy4571 119 FGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 197 (437)
Q Consensus 119 l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~ 197 (437)
|+.+ +.+|.+.||.++.. . .....+..+...+....|+|||+.+++++..+|...||+++........+ .+.. .
T Consensus 262 La~~~~~~g~~~Iy~~d~~-~-~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~ 336 (429)
T PRK01742 262 LAFASSKDGVLNIYVMGAN-G-GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--Y 336 (429)
T ss_pred EEEEEecCCcEEEEEEECC-C-CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--C
Confidence 6554 56887666644321 1 23445556677788999999999755566678889999876433223333 3433 4
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
..+|+|+|+. ++..+.++ +.+||+.++..... ...+ ....+.|+|+|+ .++.++.++...+
T Consensus 337 ~~~~SpDG~~-ia~~~~~~-i~~~Dl~~g~~~~l--------------t~~~--~~~~~~~sPdG~-~i~~~s~~g~~~~ 397 (429)
T PRK01742 337 SAQISADGKT-LVMINGDN-VVKQDLTSGSTEVL--------------SSTF--LDESPSISPNGI-MIIYSSTQGLGKV 397 (429)
T ss_pred CccCCCCCCE-EEEEcCCC-EEEEECCCCCeEEe--------------cCCC--CCCCceECCCCC-EEEEEEcCCCceE
Confidence 6789999996 55555554 55699987643211 1111 224578999999 6777778888888
Q ss_pred EeCC--CCCCceeeeeeecccCCceeeeecCC
Q psy4571 278 YCDS--TDSDTKTMRLDSIRSNGGISSTASPT 307 (437)
Q Consensus 278 wd~~--~~~~~~~~~~~~~~~~~~~~~~~s~~ 307 (437)
|++. +++..+.+.. +...+...+|+|-
T Consensus 398 l~~~~~~G~~~~~l~~---~~g~~~~p~wsp~ 426 (429)
T PRK01742 398 LQLVSADGRFKARLPG---SDGQVKFPAWSPY 426 (429)
T ss_pred EEEEECCCCceEEccC---CCCCCCCcccCCC
Confidence 8763 4555555542 2333455678774
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.5e-13 Score=127.05 Aligned_cols=240 Identities=10% Similarity=0.065 Sum_probs=144.0
Q ss_pred eEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
.|.++|..... .......+.+.+|+| +++.|+..+.+ ..|.+||+.++ +. ..+....+.+.+.+|+|||
T Consensus 177 ~L~~~D~dG~~~~~l~~~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g---~~-~~l~~~~g~~~~~~~SPDG 251 (427)
T PRK02889 177 QLQISDADGQNAQSALSSPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATG---RR-RVVANFKGSNSAPAWSPDG 251 (427)
T ss_pred EEEEECCCCCCceEeccCCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCC---CE-EEeecCCCCccceEECCCC
Confidence 46666643211 123456788999999 56666665542 35999999843 22 2233334556789999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
+.++++.+.+|...||.++........+..+........|+|||+.+++++..+|...+|.+....... +
T Consensus 252 ~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~----------~ 321 (427)
T PRK02889 252 RTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA----------Q 321 (427)
T ss_pred CEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce----------E
Confidence 975567788888777765422222455555656667789999999755555556677777654321100 1
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.+ ...+ ......+|+|+|++++++...++ .|.+||+.+++.. .+.. ........|+|||+.++..+.++.
T Consensus 322 ~l-t~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~----~~~~~~p~~spdg~~l~~~~~~~g 393 (427)
T PRK02889 322 RV-TFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTD----TTRDESPSFAPNGRYILYATQQGG 393 (427)
T ss_pred EE-ecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccC----CCCccCceECCCCCEEEEEEecCC
Confidence 11 1222 22345789999995444433332 6999999887543 2221 122356699999999888775542
Q ss_pred ccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 320 NSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
. ..+.+.+. .|+..+.+..+...+....++|
T Consensus 394 ~--------~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 394 R--------SVLAAVSS-DGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred C--------EEEEEEEC-CCCceEEeecCCCCCCCCccCC
Confidence 1 11444455 4555555655555556666655
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-12 Score=120.65 Aligned_cols=218 Identities=13% Similarity=0.142 Sum_probs=146.2
Q ss_pred eeEEEecCCCCeEEEecCceEEEEEeeeccc--cc------cCCCcceEEeeCC----CCCEEEEEECCCcEEEEEcCCC
Q psy4571 69 LYDLVVNNYVANISCILNISILFFEIIFTQN--FP------FPLSRQDVAWHLL----HESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 69 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~------~~~~v~~~~~sp~----~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
...+.....+..+.......+.+|+...... .+ ......|-+|+.. .+--++.|-.-|.|.+.|....
T Consensus 126 ~~~~~~~~~gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~ 205 (636)
T KOG2394|consen 126 VTNTNQSGKGDRLCFNVGRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINF 205 (636)
T ss_pred eeeccccCCCCEEEEecCCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchhh
Confidence 3333344445555555556788887653222 11 2235566666321 3445677888999999998732
Q ss_pred CCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---------------------------eeee
Q psy4571 137 NVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---------------------------LKLH 187 (437)
Q Consensus 137 ~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---------------------------~~~~ 187 (437)
+..+ +.... -.+..|+|+.|-|.+..+++.+..+|.+.++|..-.. .++.
T Consensus 206 ~~sk-lfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~ 284 (636)
T KOG2394|consen 206 EVSK-LFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVA 284 (636)
T ss_pred HHHH-hhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccc
Confidence 1111 00111 1236899999999888889999999999999764210 1111
Q ss_pred EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 188 ~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
.+.--.+.|...+|+|||++ ||+.+.||.+||||..+.. ++..++..-+...|++|+|||+ +++
T Consensus 285 ~w~~~~g~in~f~FS~DG~~-LA~VSqDGfLRvF~fdt~e--------------Llg~mkSYFGGLLCvcWSPDGK-yIv 348 (636)
T KOG2394|consen 285 RWHIGEGSINEFAFSPDGKY-LATVSQDGFLRIFDFDTQE--------------LLGVMKSYFGGLLCVCWSPDGK-YIV 348 (636)
T ss_pred eeEeccccccceeEcCCCce-EEEEecCceEEEeeccHHH--------------HHHHHHhhccceEEEEEcCCcc-EEE
Confidence 22223457889999999995 9999999999999998853 3334556667899999999999 789
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
+|+.|..|.||.+...+.+..- ..|...+..++|.|
T Consensus 349 tGGEDDLVtVwSf~erRVVARG---qGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 349 TGGEDDLVTVWSFEERRVVARG---QGHKSWVSVVAFDP 384 (636)
T ss_pred ecCCcceEEEEEeccceEEEec---cccccceeeEeecc
Confidence 9999999999999876544332 23455555567764
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.9e-11 Score=103.79 Aligned_cols=171 Identities=20% Similarity=0.349 Sum_probs=119.5
Q ss_pred ceEEEeeccC--ceEeeecCCC----------ceeEEEecCCCCeEEEecCceEEEEEeeecc---cc----ccCCCcce
Q psy4571 48 DAVEERVINE--EYKIWKKNTP----------FLYDLVVNNYVANISCILNISILFFEIIFTQ---NF----PFPLSRQD 108 (437)
Q Consensus 48 ~~l~tgs~d~--~v~iw~~~~~----------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---~~----~~~~~v~~ 108 (437)
.+++..+.+. .+|+.+...+ .+.++.+ ...+.++|..+. |.|+|+..-+ .+ +.+.++.+
T Consensus 57 SLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~Vrm-Nr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~A 134 (391)
T KOG2110|consen 57 SLVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRM-NRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCA 134 (391)
T ss_pred ceeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEE-ccceEEEEEccc-EEEEecccceeehhhhccCCCccceEe
Confidence 4555555444 3677664322 2333333 334555665554 9999965322 22 22333444
Q ss_pred EEeeCCCCCEEEE--EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe-EEEEeCCCCcee
Q psy4571 109 VAWHLLHESLFGS--VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT-VALWDLRNLKLK 185 (437)
Q Consensus 109 ~~~sp~~~~~l~~--~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~-i~lwd~~~~~~~ 185 (437)
+.+++ ++.++|- ....|.|.+||.. ..++...+..|++++.+++|+++|. +|||+|+.|+ ||++.+.+++.
T Consensus 135 lS~n~-~n~ylAyp~s~t~GdV~l~d~~---nl~~v~~I~aH~~~lAalafs~~G~-llATASeKGTVIRVf~v~~G~k- 208 (391)
T KOG2110|consen 135 LSPNN-ANCYLAYPGSTTSGDVVLFDTI---NLQPVNTINAHKGPLAALAFSPDGT-LLATASEKGTVIRVFSVPEGQK- 208 (391)
T ss_pred eccCC-CCceEEecCCCCCceEEEEEcc---cceeeeEEEecCCceeEEEECCCCC-EEEEeccCceEEEEEEcCCccE-
Confidence 44444 3446653 2336899999999 6788889999999999999999999 6999999998 78999998776
Q ss_pred eeEeccC--CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCC
Q psy4571 186 LHSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 186 ~~~~~~h--~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~ 227 (437)
+..++.- ...|++++|+|+++ +|++.|..++|++|.+....
T Consensus 209 l~eFRRG~~~~~IySL~Fs~ds~-~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 209 LYEFRRGTYPVSIYSLSFSPDSQ-FLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred eeeeeCCceeeEEEEEEECCCCC-eEEEecCCCeEEEEEecccc
Confidence 6666532 34588999999999 58888889999999998755
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.4e-13 Score=116.68 Aligned_cols=201 Identities=14% Similarity=0.189 Sum_probs=148.1
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC---CCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH---NVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
.+...|+++.|+. ++.+|++|+.|..+++|+++.. ...+++.... .|...|.|++|...+.+ +.+|..+++|.+
T Consensus 54 ~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~-~~SG~~~~~VI~ 131 (609)
T KOG4227|consen 54 EHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRF-LYSGERWGTVIK 131 (609)
T ss_pred hhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCee-EecCCCcceeEe
Confidence 3567899999999 6999999999999999998632 1335555443 35578999999988885 999999999999
Q ss_pred EeCCCCceeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 177 WDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 177 wd~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
-|+++.+. +..+. ...+.|+.+..+|..+ +|++.+.++.|.+||.+....... ++..........
T Consensus 132 HDiEt~qs-i~V~~~~~~~~~VY~m~~~P~DN-~~~~~t~~~~V~~~D~Rd~~~~~~-----------~~~~AN~~~~F~ 198 (609)
T KOG4227|consen 132 HDIETKQS-IYVANENNNRGDVYHMDQHPTDN-TLIVVTRAKLVSFIDNRDRQNPIS-----------LVLPANSGKNFY 198 (609)
T ss_pred eeccccee-eeeecccCcccceeecccCCCCc-eEEEEecCceEEEEeccCCCCCCc-----------eeeecCCCccce
Confidence 99998544 44442 2234899999999976 699999999999999988653322 122333455678
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeec---ccCCceeeeecCCCCcccccCC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSI---RSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.+.|+|..+.+|++.+..+-+-+||.+.... +........ .......+.|+|+|..+.+-..
T Consensus 199 t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR 264 (609)
T KOG4227|consen 199 TAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRR 264 (609)
T ss_pred eeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhc
Confidence 8999999998999999999999999986432 111111110 1122356689999987766543
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=118.53 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=134.7
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..|.-+.|..+...+|.....++.|.+|++. +.+-...+.....++.+++|||+|+++|.+...|-.|.+|.+.+.+
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~---Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~ 125 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLV---QPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK 125 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEee---cceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce
Confidence 3566788888667778888999999999998 4555666677788999999999999989999999999999999855
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.. -+.--+..+..++|+|+|++ .+.+++-.....+.+... ....++..+.-.+-..+++.|+|||.
T Consensus 126 ~~--~~~~pK~~~kg~~f~~dg~f-~ai~sRrDCkdyv~i~~c-----------~~W~ll~~f~~dT~DltgieWsPdg~ 191 (447)
T KOG4497|consen 126 GY--LLPHPKTNVKGYAFHPDGQF-CAILSRRDCKDYVQISSC-----------KAWILLKEFKLDTIDLTGIEWSPDGN 191 (447)
T ss_pred eE--EecccccCceeEEECCCCce-eeeeecccHHHHHHHHhh-----------HHHHHHHhcCCCcccccCceECCCCc
Confidence 42 23323455689999999995 555543211111111110 01122333444556678999999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
+ ++ +||---.-.+..+. ...|...++|+|.+++++.|+.|+.+++.+.-.|+.
T Consensus 192 ~-la---------Vwd~~Leykv~aYe----~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~ 244 (447)
T KOG4497|consen 192 W-LA---------VWDNVLEYKVYAYE----RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKP 244 (447)
T ss_pred E-EE---------Eecchhhheeeeee----eccceeEEEeccccceEEeeccchhhhhhceeeeee
Confidence 4 33 45532211111221 246777889999999999999999987776665554
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.6e-13 Score=115.31 Aligned_cols=186 Identities=20% Similarity=0.342 Sum_probs=131.1
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+..++|++ +-..||++..|-.|++||-... .+...-......|+|++|-|.+...|+.|+..| |.+|......
T Consensus 99 ~dlr~~aWhq-H~~~fava~nddvVriy~ksst---~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tl 173 (445)
T KOG2139|consen 99 IDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSST---CPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTL 173 (445)
T ss_pred cceeeEeech-hhhhhhhhccCcEEEEeccCCC---CCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccc
Confidence 4567899999 6778899999999999998742 222111233557999999998877788887765 8899875311
Q ss_pred e-------------eeeEeccCCCceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 184 L-------------KLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 184 ~-------------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
. .+....+| .+|+++.|.+||. .+++++. |..|.|||..++....- ...-
T Consensus 174 n~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt-~l~tAS~gsssi~iWdpdtg~~~pL--------------~~~g 237 (445)
T KOG2139|consen 174 NANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGT-ILVTASFGSSSIMIWDPDTGQKIPL--------------IPKG 237 (445)
T ss_pred ccccccccccccchhheeCCCC-ceeeEEEEcCCCC-EEeecccCcceEEEEcCCCCCcccc--------------cccC
Confidence 1 12223344 6899999999998 5777765 56799999999765432 1122
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
-+.++-+.|+|||. .+.++.-|+..++|+.....-...... ....+...+|+|+|++|...
T Consensus 238 lgg~slLkwSPdgd-~lfaAt~davfrlw~e~q~wt~erw~l---gsgrvqtacWspcGsfLLf~ 298 (445)
T KOG2139|consen 238 LGGFSLLKWSPDGD-VLFAATCDAVFRLWQENQSWTKERWIL---GSGRVQTACWSPCGSFLLFA 298 (445)
T ss_pred CCceeeEEEcCCCC-EEEEecccceeeeehhcccceecceec---cCCceeeeeecCCCCEEEEE
Confidence 35688899999999 566888999999996654332222222 23466677999999976544
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=124.04 Aligned_cols=223 Identities=15% Similarity=0.231 Sum_probs=167.0
Q ss_pred eEeeccChhhhhhhcccceeEEecCCcccc----cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCC
Q psy4571 4 SIQALTSPKLLLHLSQNAFFTWSALPLSHS----IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVA 79 (437)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~ 79 (437)
.++|+|.+..+-++..+-+|+|.....-++ .++|.++.|. |+.=+|++++..|-++.-|..+|.+.+-.....
T Consensus 175 Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~~~v~rLeFL-PyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~-- 251 (545)
T KOG1272|consen 175 DVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRHIRVARLEFL-PYHFLLVAASEAGFLKYQDVSTGKLVASIRTGA-- 251 (545)
T ss_pred hhhhhcchHHHHhhhhceEEEecCCCcEEeehhhcCchhhhccc-chhheeeecccCCceEEEeechhhhhHHHHccC--
Confidence 468999999999999999999999888765 6789999999 999999999999999998888777654432222
Q ss_pred eEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC
Q psy4571 80 NISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 80 ~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~ 159 (437)
..+..++-+| .+..+-+|...|+|.+|.+. ..+++..+..|.++|.+|++.+
T Consensus 252 ------------------------G~~~vm~qNP-~NaVih~GhsnGtVSlWSP~---skePLvKiLcH~g~V~siAv~~ 303 (545)
T KOG1272|consen 252 ------------------------GRTDVMKQNP-YNAVIHLGHSNGTVSLWSPN---SKEPLVKILCHRGPVSSIAVDR 303 (545)
T ss_pred ------------------------CccchhhcCC-ccceEEEcCCCceEEecCCC---CcchHHHHHhcCCCcceEEECC
Confidence 2344566778 56788899999999999998 6677878889999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+|.+ ++|.+.|..++|||++.... +.++.. ..+...+++|..| +|| ++....|.||.-........ ..
T Consensus 304 ~G~Y-MaTtG~Dr~~kIWDlR~~~q-l~t~~t-p~~a~~ls~Sqkg--lLA-~~~G~~v~iw~d~~~~s~~~------~~ 371 (545)
T KOG1272|consen 304 GGRY-MATTGLDRKVKIWDLRNFYQ-LHTYRT-PHPASNLSLSQKG--LLA-LSYGDHVQIWKDALKGSGHG------ET 371 (545)
T ss_pred CCcE-EeecccccceeEeeeccccc-cceeec-CCCcccccccccc--cee-eecCCeeeeehhhhcCCCCC------Cc
Confidence 9997 99999999999999998775 445443 5667889998877 354 45566899995332211000 00
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
+.+.+ .-.+.|..+.|+|-.. +|-.|-..|
T Consensus 372 pYm~H---~~~~~V~~l~FcP~ED-vLGIGH~~G 401 (545)
T KOG1272|consen 372 PYMNH---RCGGPVEDLRFCPYED-VLGIGHAGG 401 (545)
T ss_pred chhhh---ccCcccccceeccHHH-eeeccccCC
Confidence 11111 1134899999999766 554444433
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.8e-12 Score=109.37 Aligned_cols=271 Identities=13% Similarity=0.162 Sum_probs=187.3
Q ss_pred eEeeccChhhhhhhcccceeEEecCCcc--------cccceeEEEEeeCCCcceEEEeeccCceEeee------------
Q psy4571 4 SIQALTSPKLLLHLSQNAFFTWSALPLS--------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWK------------ 63 (437)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~------------ 63 (437)
.||-.+.|.++....|..+.+|+..... +-+-++.++.+. ++..+|+.|-.++++.-+.
T Consensus 30 ~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~-~e~~~L~vg~~ngtvtefs~sedfnkm~~~r 108 (404)
T KOG1409|consen 30 AILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYV-SESRRLYVGQDNGTVTEFALSEDFNKMTFLK 108 (404)
T ss_pred heeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeee-ccceEEEEEEecceEEEEEhhhhhhhcchhh
Confidence 4677788888888888888887765543 225567778888 7788888888888765443
Q ss_pred ---cCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 64 ---KNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 64 ---~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
.|.+.+....+....+.+ +++.|..+.---...+..+ .+....+++.+.- . +...|...|.|.+-.+...
T Consensus 109 ~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~-~--~~fvGd~~gqvt~lr~~~~ 185 (404)
T KOG1409|consen 109 DYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDA-L--YAFVGDHSGQITMLKLEQN 185 (404)
T ss_pred hhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceee-E--EEEecccccceEEEEEeec
Confidence 556777777777766666 4444444322222222222 1223333444433 1 5556777788777766543
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
...++..+.+|.+.+.+++|.|... +|.+|..|..+.+||+--.+.....+.+|.+.|..+...+--+ .+.+++.||
T Consensus 186 -~~~~i~~~~~h~~~~~~l~Wd~~~~-~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~-~l~S~~edg 262 (404)
T KOG1409|consen 186 -GCQLITTFNGHTGEVTCLKWDPGQR-LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTR-QLISCGEDG 262 (404)
T ss_pred -CCceEEEEcCcccceEEEEEcCCCc-EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhhe-eeeeccCCC
Confidence 3567888999999999999999777 6999999999999999876666777889999999998887776 488999999
Q ss_pred eEEEEEcCCCCCCCCCC--C------------------------------------------------------------
Q psy4571 217 RLHVWDLSKIGEEQSTE--D------------------------------------------------------------ 234 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~--~------------------------------------------------------------ 234 (437)
.|.+|++.........- .
T Consensus 263 ~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~ 342 (404)
T KOG1409|consen 263 GIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVC 342 (404)
T ss_pred eEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccccceeEEEEe
Confidence 99999997643211100 0
Q ss_pred ------CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 235 ------AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 235 ------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
..+.++.++..+..-...|+.+.+...-. +|+|+|.|..|+|||++.
T Consensus 343 ~~c~~~i~~~~~t~LA~phei~tgItamhlqetlg-lLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 343 DSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLG-LLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cccchhhhcCCCCccccccccccceeEEEhhhhcc-ceeecCCceEEEEEechh
Confidence 01111122333333344688888887777 788999999999999875
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-11 Score=120.20 Aligned_cols=202 Identities=9% Similarity=0.010 Sum_probs=130.6
Q ss_pred eEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEEC---CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVAD---DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
.|.++|....... .....+...+|+| +++.|+..+. +..|.+||+.++ + ...+..+.+.+...+|+|||
T Consensus 183 ~l~~~d~dg~~~~~lt~~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g---~-~~~l~~~~g~~~~~~~SPDG 257 (435)
T PRK05137 183 RLAIMDQDGANVRYLTDGSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETG---Q-RELVGNFPGMTFAPRFSPDG 257 (435)
T ss_pred EEEEECCCCCCcEEEecCCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCC---c-EEEeecCCCcccCcEECCCC
Confidence 5777775433221 2345789999999 5666666543 468999999743 2 23344556678889999999
Q ss_pred CcEEEEEeCCCe--EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+.++++.+.++. |.+||+.++. ...+..+.......+|+|+|+.++++...+| .|+++|+..+..
T Consensus 258 ~~la~~~~~~g~~~Iy~~d~~~~~--~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~--------- 326 (435)
T PRK05137 258 RKVVMSLSQGGNTDIYTMDLRSGT--TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP--------- 326 (435)
T ss_pred CEEEEEEecCCCceEEEEECCCCc--eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe---------
Confidence 976667777766 6677888754 4556666666778999999997554443444 577888765422
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCC--CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..+..+...+....|+|+|+.++++.... ..|.+||+.++. .+.+.. ........|+|||+.++..+
T Consensus 327 ------~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~----~~~~~~p~~spDG~~i~~~~ 395 (435)
T PRK05137 327 ------RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTS----GFLVEGPTWAPNGRVIMFFR 395 (435)
T ss_pred ------EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccC----CCCCCCCeECCCCCEEEEEE
Confidence 11222234566788999999555444322 468888986543 233221 12345568999999887655
Q ss_pred C
Q psy4571 316 P 316 (437)
Q Consensus 316 ~ 316 (437)
.
T Consensus 396 ~ 396 (435)
T PRK05137 396 Q 396 (435)
T ss_pred c
Confidence 4
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.5e-12 Score=121.01 Aligned_cols=203 Identities=13% Similarity=0.067 Sum_probs=132.7
Q ss_pred cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC---CCeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA---DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~---dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
.|.++|.. +.....+..|...+.+.+|+|||+. |+..+. +..|.+||+.++.. ..+..+.+.+...+|+|
T Consensus 183 ~l~~~d~d----g~~~~~lt~~~~~v~~p~wSpDG~~-lay~s~~~g~~~i~~~dl~~g~~--~~l~~~~g~~~~~~~SP 255 (435)
T PRK05137 183 RLAIMDQD----GANVRYLTDGSSLVLTPRFSPNRQE-ITYMSYANGRPRVYLLDLETGQR--ELVGNFPGMTFAPRFSP 255 (435)
T ss_pred EEEEECCC----CCCcEEEecCCCCeEeeEECCCCCE-EEEEEecCCCCEEEEEECCCCcE--EEeecCCCcccCcEECC
Confidence 68888875 2344556677889999999999997 555443 46899999988653 34555667788999999
Q ss_pred CCCcEEEEEeCCCe--EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEe
Q psy4571 204 HNETILASSGTDRR--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYC 279 (437)
Q Consensus 204 ~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd 279 (437)
+|+.++++.+.++. |.+||+.++.. ..+..+........|+|||+.++++...+| .|+++|
T Consensus 256 DG~~la~~~~~~g~~~Iy~~d~~~~~~---------------~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d 320 (435)
T PRK05137 256 DGRKVVMSLSQGGNTDIYTMDLRSGTT---------------TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMN 320 (435)
T ss_pred CCCEEEEEEecCCCceEEEEECCCCce---------------EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEE
Confidence 99976667776665 77778876532 223344555677899999995554443433 688889
Q ss_pred CCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
+.+++. +.+.. .........|+|||+.++..+.++. ...+.+||...+.. +.+... .......++|
T Consensus 321 ~~g~~~-~~lt~---~~~~~~~~~~SpdG~~ia~~~~~~~--------~~~i~~~d~~~~~~-~~lt~~-~~~~~p~~sp 386 (435)
T PRK05137 321 ADGSNP-RRISF---GGGRYSTPVWSPRGDLIAFTKQGGG--------QFSIGVMKPDGSGE-RILTSG-FLVEGPTWAP 386 (435)
T ss_pred CCCCCe-EEeec---CCCcccCeEECCCCCEEEEEEcCCC--------ceEEEEEECCCCce-EeccCC-CCCCCCeECC
Confidence 876543 33322 1223345689999999887653321 01267788755443 333221 2355677899
Q ss_pred CCcccc
Q psy4571 360 NDTEDL 365 (437)
Q Consensus 360 ~~~~~~ 365 (437)
||+.++
T Consensus 387 DG~~i~ 392 (435)
T PRK05137 387 NGRVIM 392 (435)
T ss_pred CCCEEE
Confidence 987543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-12 Score=113.28 Aligned_cols=122 Identities=21% Similarity=0.359 Sum_probs=108.0
Q ss_pred cCCCcceEEeeCCC--CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLH--ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~--~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+..++++.|-| + ...||+++.-+.|++||.+. +.+++..+.-.+.+++++...|.+.+ +++|..-|.+..||+
T Consensus 201 VPvW~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~~--qRRPV~~fd~~E~~is~~~l~p~gn~-Iy~gn~~g~l~~FD~ 276 (412)
T KOG3881|consen 201 VPVWITDIRFLE-GSPNYKFATITRYHQVRLYDTRH--QRRPVAQFDFLENPISSTGLTPSGNF-IYTGNTKGQLAKFDL 276 (412)
T ss_pred eeeeeccceecC-CCCCceEEEEecceeEEEecCcc--cCcceeEeccccCcceeeeecCCCcE-EEEecccchhheecc
Confidence 345667888977 5 78899999999999999985 45788888888899999999999995 999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
+.++.....+.+..+.|.++..+|+++ ++++++.|..|||+|+.+.+.
T Consensus 277 r~~kl~g~~~kg~tGsirsih~hp~~~-~las~GLDRyvRIhD~ktrkl 324 (412)
T KOG3881|consen 277 RGGKLLGCGLKGITGSIRSIHCHPTHP-VLASCGLDRYVRIHDIKTRKL 324 (412)
T ss_pred cCceeeccccCCccCCcceEEEcCCCc-eEEeeccceeEEEeecccchh
Confidence 998876667899999999999999998 699999999999999998543
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-11 Score=108.22 Aligned_cols=277 Identities=13% Similarity=0.201 Sum_probs=178.1
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----eeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----LYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQ 107 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~ 107 (437)
....+.++.|+ .+|++|+||..+|.|-++...... .+....++..+ .. ..+.......|+
T Consensus 24 eadiis~vef~-~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepE-FD-------------YLkSleieEKin 88 (433)
T KOG1354|consen 24 EADIISAVEFD-HYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPE-FD-------------YLKSLEIEEKIN 88 (433)
T ss_pred hhcceeeEEee-cccceEeecCCCCeEEEeecccccccceeeeeeeeccCcc-cc-------------hhhhhhhhhhhh
Confidence 45568899999 999999999999999988843321 11111111111 10 112233456889
Q ss_pred eEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCC--------------------------------Ceee-eccCCCCeE
Q psy4571 108 DVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSK--------------------------------PSHT-VDAHTAEVN 153 (437)
Q Consensus 108 ~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~--------------------------------~~~~-~~~h~~~v~ 153 (437)
.+.|.++ +...|+..+.|.+|++|.+....... +.+. -.+|+-.|+
T Consensus 89 kIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiN 168 (433)
T KOG1354|consen 89 KIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHIN 168 (433)
T ss_pred hceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEee
Confidence 9999875 34577788899999999886432111 0011 136788899
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEeccC-----CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSFESH-----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~~~h-----~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
+|.++.|++. ++++ .|-.|.+|+++-.... +..++.+ ..-|++..|+|....+++-.+..|+|++-|++..
T Consensus 169 SIS~NsD~Et-~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~ 246 (433)
T KOG1354|consen 169 SISVNSDKET-FLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQS 246 (433)
T ss_pred eeeecCccce-Eeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhh
Confidence 9999999985 6554 6889999998753332 2233333 2458899999987778888889999999999965
Q ss_pred CCCCCCCC--CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC-CCCCCceeeeeeec--------c
Q psy4571 227 GEEQSTED--AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD-STDSDTKTMRLDSI--------R 295 (437)
Q Consensus 227 ~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~--------~ 295 (437)
.....-.. .....+....-+.+--..|..+.|++.|+ ++++-.. -+|++||+ ...+++.+++.+.. .
T Consensus 247 aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGr-yilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lY 324 (433)
T KOG1354|consen 247 ALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGR-YILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLY 324 (433)
T ss_pred hhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCc-EEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHh
Confidence 43221100 00000111111233345789999999999 4544432 68999999 55566666664321 1
Q ss_pred cC----CceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 296 SN----GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 296 ~~----~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
.. .-..++|+-++..+.+|+.... ++++++..|
T Consensus 325 EnD~IfdKFec~~sg~~~~v~TGsy~n~-----------frvf~~~~g 361 (433)
T KOG1354|consen 325 ENDAIFDKFECSWSGNDSYVMTGSYNNV-----------FRVFNLARG 361 (433)
T ss_pred hccchhheeEEEEcCCcceEecccccce-----------EEEecCCCC
Confidence 11 2234588999999999998887 566665544
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.9e-12 Score=123.22 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=131.7
Q ss_pred CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC---CCeEEEEeCCCCceeeeEeccCCCceEEEEEc
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA---DKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~---dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~ 202 (437)
..|.+||... ...+.+..+...+.+.+|+|+|+. |+..+. +..|.+||+.+++. ..+..+.+...+.+|+
T Consensus 184 ~~l~i~D~~g----~~~~~lt~~~~~v~~p~wSpDg~~-la~~s~~~~~~~l~~~dl~~g~~--~~l~~~~g~~~~~~~S 256 (433)
T PRK04922 184 YALQVADSDG----YNPQTILRSAEPILSPAWSPDGKK-LAYVSFERGRSAIYVQDLATGQR--ELVASFRGINGAPSFS 256 (433)
T ss_pred EEEEEECCCC----CCceEeecCCCccccccCCCCCCE-EEEEecCCCCcEEEEEECCCCCE--EEeccCCCCccCceEC
Confidence 3588898862 333445566778999999999997 665553 34699999987553 2333444555688999
Q ss_pred CCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe--EEEE
Q psy4571 203 PHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI--MQEY 278 (437)
Q Consensus 203 p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~--i~iw 278 (437)
|+|+.++++.+.+| .|++||+.++.. ..+..+.......+|+|||+.++++...+|. |+++
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~---------------~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~ 321 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQL---------------TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRV 321 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCe---------------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 99997666766666 599999987542 1233444445678999999955555444554 6677
Q ss_pred eCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 279 CDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
|+.+++. +.+.. ........+|||||+.++..+.++. ...+.+||+.+++.. .+... .......++
T Consensus 322 dl~~g~~-~~lt~---~g~~~~~~~~SpDG~~Ia~~~~~~~--------~~~I~v~d~~~g~~~-~Lt~~-~~~~~p~~s 387 (433)
T PRK04922 322 AASGGSA-ERLTF---QGNYNARASVSPDGKKIAMVHGSGG--------QYRIAVMDLSTGSVR-TLTPG-SLDESPSFA 387 (433)
T ss_pred ECCCCCe-EEeec---CCCCccCEEECCCCCEEEEEECCCC--------ceeEEEEECCCCCeE-ECCCC-CCCCCceEC
Confidence 7776643 22322 1122335699999999887643321 012789999887654 34322 234456789
Q ss_pred CCCcccc
Q psy4571 359 DNDTEDL 365 (437)
Q Consensus 359 ~~~~~~~ 365 (437)
|||..++
T Consensus 388 pdG~~i~ 394 (433)
T PRK04922 388 PNGSMVL 394 (433)
T ss_pred CCCCEEE
Confidence 9998654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=7e-12 Score=123.76 Aligned_cols=178 Identities=14% Similarity=0.181 Sum_probs=138.2
Q ss_pred EEecCceEEEEEeeeccc---cccCC-----CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE
Q psy4571 82 SCILNISILFFEIIFTQN---FPFPL-----SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~---~~~~~-----~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~ 153 (437)
....+..+.+||...... ..... ...-+-+++ +.-++++|+.-+.|.+|+... ...+. .+.+|.+.|.
T Consensus 104 l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~-~~~~i~~gsv~~~iivW~~~~--dn~p~-~l~GHeG~iF 179 (967)
T KOG0974|consen 104 LVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSA-EELYIASGSVFGEIIVWKPHE--DNKPI-RLKGHEGSIF 179 (967)
T ss_pred EEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccC-cEEEEEeccccccEEEEeccc--cCCcc-eecccCCceE
Confidence 556677788888654322 22222 222334456 567899999999999999982 22333 6789999999
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 233 (437)
++.|+.+|.+ +++.|+|.++++|++++.+.......+|..+|..+.|.|+ .++|++.|.+.++|+.....
T Consensus 180 ~i~~s~dg~~-i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~~~~~~------ 249 (967)
T KOG0974|consen 180 SIVTSLDGRY-IASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN---RIITVGEDCTCRVWGVNGTQ------ 249 (967)
T ss_pred EEEEccCCcE-EEEEecCcceeeeecccccccCcccccccceeEEEEeccc---eeEEeccceEEEEEecccce------
Confidence 9999999996 9999999999999999977755567789999999999998 38999999999999665532
Q ss_pred CCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 234 DAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+..+.+|. ..+..++..++.. +++|++.|+.+++||+...
T Consensus 250 ---------l~~y~~h~g~~iw~~~~~~~~~-~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 250 ---------LEVYDEHSGKGIWKIAVPIGVI-IKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred ---------ehhhhhhhhcceeEEEEcCCce-EEEeeccCcchhhhhhhcc
Confidence 22356664 4688999888877 8899999999999998753
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-10 Score=99.08 Aligned_cols=168 Identities=18% Similarity=0.303 Sum_probs=118.0
Q ss_pred CceEeeecCCCc-eeEEEecC-------CCCeEEEecCceEEEEEeeeccc----cccCC-CcceEEeeCCCCCEEEE--
Q psy4571 57 EEYKIWKKNTPF-LYDLVVNN-------YVANISCILNISILFFEIIFTQN----FPFPL-SRQDVAWHLLHESLFGS-- 121 (437)
Q Consensus 57 ~~v~iw~~~~~~-~~~~~~~~-------~~~~i~~~~~~~i~~~~~~~~~~----~~~~~-~v~~~~~sp~~~~~l~~-- 121 (437)
+.+.|||-+... +..+.+.. ....+++.....|.+|.....-+ +.... +---++..|..+..+++
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I~~V~l~r~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafP 154 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEIKAVKLRRDRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFP 154 (346)
T ss_pred ceEEEEecccCcEEEEEEeccceeeEEEcCCeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcC
Confidence 378999954433 33333322 23456777888999997552221 11111 22245555543433332
Q ss_pred EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe-EEEEeCCCCceeeeEecc--CCCceEE
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQ 198 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~-i~lwd~~~~~~~~~~~~~--h~~~v~~ 198 (437)
|-.-|.|.|-|+...... ......+|...|.|++.+.+|. ++||+|..|+ |||||..++.. +..++. ....|++
T Consensus 155 g~k~GqvQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~Gt-~vATaStkGTLIRIFdt~~g~~-l~E~RRG~d~A~iy~ 231 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPN-APSIINAHDSDIACVALNLQGT-LVATASTKGTLIRIFDTEDGTL-LQELRRGVDRADIYC 231 (346)
T ss_pred CCccceEEEEEhhhcCcC-CceEEEcccCceeEEEEcCCcc-EEEEeccCcEEEEEEEcCCCcE-eeeeecCCchheEEE
Confidence 455689999999854322 3467789999999999999999 6999999998 89999999776 666653 3457999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 199 VQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 199 v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
++|+|+.. +||.+|..|+++|+.++....
T Consensus 232 iaFSp~~s-~LavsSdKgTlHiF~l~~~~~ 260 (346)
T KOG2111|consen 232 IAFSPNSS-WLAVSSDKGTLHIFSLRDTEN 260 (346)
T ss_pred EEeCCCcc-EEEEEcCCCeEEEEEeecCCC
Confidence 99999998 599999999999999987543
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-11 Score=115.89 Aligned_cols=218 Identities=11% Similarity=0.086 Sum_probs=126.2
Q ss_pred cCCCceeEEEecCCCCeEEEec----CceEEEEEeeeccccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 64 KNTPFLYDLVVNNYVANISCIL----NISILFFEIIFTQNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~----~~~i~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
.+.+.+....|++++..+.... ...|.+||+..++... .+......+|+|++..++++.+.+|...||.++..
T Consensus 193 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~ 272 (427)
T PRK02889 193 SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNAD 272 (427)
T ss_pred cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECC
Confidence 3445566677777777664432 2357888876554322 33456689999954444456777888777765422
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC--CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
......+..+.+......|+|||+.+++++..+|...+|.+. ++. ...+..........+|+|+|++ ++..+.
T Consensus 273 --~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~--~~~lt~~g~~~~~~~~SpDG~~-Ia~~s~ 347 (427)
T PRK02889 273 --GSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA--AQRVTFTGSYNTSPRISPDGKL-LAYISR 347 (427)
T ss_pred --CCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc--eEEEecCCCCcCceEECCCCCE-EEEEEc
Confidence 122344445555567789999999755555556777777654 333 2222222233456789999996 444443
Q ss_pred CC---eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe--EEEEeCCCCCCceee
Q psy4571 215 DR---RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI--MQEYCDSTDSDTKTM 289 (437)
Q Consensus 215 dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~ 289 (437)
++ .|.+||+.++.... +... .......|+|+|+.++++....|. +.+.++. +.....+
T Consensus 348 ~~g~~~I~v~d~~~g~~~~---------------lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l 410 (427)
T PRK02889 348 VGGAFKLYVQDLATGQVTA---------------LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRL 410 (427)
T ss_pred cCCcEEEEEEECCCCCeEE---------------ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEe
Confidence 33 69999998754221 1111 223567999999966665554443 5555553 4333333
Q ss_pred eeeecccCCceeeeecC
Q psy4571 290 RLDSIRSNGGISSTASP 306 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~ 306 (437)
.. +.......+|+|
T Consensus 411 ~~---~~g~~~~p~wsp 424 (427)
T PRK02889 411 SV---QGGDVREPSWGP 424 (427)
T ss_pred ec---CCCCCCCCccCC
Confidence 22 122233446665
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.3e-11 Score=109.93 Aligned_cols=258 Identities=14% Similarity=0.205 Sum_probs=170.0
Q ss_pred EEEeeCCCcce-EEEeeccCceEeeecCCCc----------eeEEEecCC--CCeEEEecCceEEEEEeeecc--ccccC
Q psy4571 39 RLCVAEPFDDA-VEERVINEEYKIWKKNTPF----------LYDLVVNNY--VANISCILNISILFFEIIFTQ--NFPFP 103 (437)
Q Consensus 39 ~~~~~~~~~~~-l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~--~~~i~~~~~~~i~~~~~~~~~--~~~~~ 103 (437)
.+..+ |+|.+ ++||-..-.||+++...-. +..+....+ ...+.-..|..|-+-. ..+. ....|
T Consensus 56 ~ik~s-~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHa-k~G~hy~~RIP 133 (703)
T KOG2321|consen 56 RIKVS-PDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHA-KYGRHYRTRIP 133 (703)
T ss_pred eeEec-CCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehh-hcCeeeeeecC
Confidence 35556 77766 4678888899999954311 111111000 0001111222222211 1111 22346
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
....+++++.-+..++++|+ ...|+-++++ +++.+..+....+.++++..++... +|++|+.+|.|..||.++..
T Consensus 134 ~~GRDm~y~~~scDly~~gs-g~evYRlNLE---qGrfL~P~~~~~~~lN~v~in~~hg-Lla~Gt~~g~VEfwDpR~ks 208 (703)
T KOG2321|consen 134 KFGRDMKYHKPSCDLYLVGS-GSEVYRLNLE---QGRFLNPFETDSGELNVVSINEEHG-LLACGTEDGVVEFWDPRDKS 208 (703)
T ss_pred cCCccccccCCCccEEEeec-CcceEEEEcc---ccccccccccccccceeeeecCccc-eEEecccCceEEEecchhhh
Confidence 66778888765566665554 5568888998 6677777777778999999999888 79999999999999999844
Q ss_pred eeeeEe------ccCCC-----ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc
Q psy4571 184 LKLHSF------ESHKD-----EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252 (437)
Q Consensus 184 ~~~~~~------~~h~~-----~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (437)
. +..+ ..|.+ .|+++.|+.+|-. ++.|..+|.+.|||++...+.. ..-++..-+
T Consensus 209 r-v~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~-~aVGts~G~v~iyDLRa~~pl~-------------~kdh~~e~p 273 (703)
T KOG2321|consen 209 R-VGTLDAASSVNSHPGGDAAPSVTALKFRDDGLH-VAVGTSTGSVLIYDLRASKPLL-------------VKDHGYELP 273 (703)
T ss_pred h-heeeecccccCCCccccccCcceEEEecCCcee-EEeeccCCcEEEEEcccCCcee-------------ecccCCccc
Confidence 3 3333 23333 3999999998875 8999999999999999965432 223344568
Q ss_pred EEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 253 ISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 253 v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
|..+.|.+.+. ..++| .....++|||-.+|+....+.. .......++-|++-+++++-.++.+-.+
T Consensus 274 i~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEp----t~~lND~C~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 274 IKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEP----TSDLNDFCFVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred eeeecccccCCCceEEe-cchHHhhhcccccCCceeeccc----cCCcCceeeecCCceEEEecCCCcceeE
Confidence 99999977632 24544 3557899999999998877763 3345556788888888887766554433
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-11 Score=122.85 Aligned_cols=224 Identities=12% Similarity=0.106 Sum_probs=150.6
Q ss_pred cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 100 FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
..+...+..++.++.+..+|++|+.||+|++||...-. ..+...++..-..++.++...+.+.. +|.|+.||.|+
T Consensus 1045 ~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~-~Av~t~DG~v~ 1123 (1431)
T KOG1240|consen 1045 HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ-FAVSTKDGSVR 1123 (1431)
T ss_pred hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe-EEEEcCCCeEE
Confidence 44667788999988666999999999999999987432 12233344434678999999999996 99999999999
Q ss_pred EEeCCCCcee------eeEeccCC-Cce-EEEEEcCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 176 LWDLRNLKLK------LHSFESHK-DEI-FQVQWSPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 176 lwd~~~~~~~------~~~~~~h~-~~v-~~v~~~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.+++..... ......+. +.+ ..-+|... +..+++.+..-+.|..||+++........ .
T Consensus 1124 ~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk------------~ 1191 (1431)
T KOG1240|consen 1124 VLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK------------N 1191 (1431)
T ss_pred EEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh------------c
Confidence 9999862210 11112222 223 23334332 22367788888999999999876544421 2
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee---cCCCCcccccCCCCccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA---SPTASSTASESPTPTNSVH 323 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---s~~g~~l~s~s~d~~~~~~ 323 (437)
....+.|++++.+|.++ .++.|...|.+.+||++-+.++..+..... .....+.. .|.....++++..+.
T Consensus 1192 ~~~hG~vTSi~idp~~~-WlviGts~G~l~lWDLRF~~~i~sw~~P~~--~~i~~v~~~~~~~~~S~~vs~~~~~~---- 1264 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCN-WLVIGTSRGQLVLWDLRFRVPILSWEHPAR--APIRHVWLCPTYPQESVSVSAGSSSN---- 1264 (1431)
T ss_pred CccccceeEEEecCCce-EEEEecCCceEEEEEeecCceeecccCccc--CCcceEEeeccCCCCceEEEecccCC----
Confidence 23346899999999999 677999999999999998887777764332 22222322 333344444443211
Q ss_pred ccccccccccccchhhhhhhhhcCC
Q psy4571 324 EKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 324 ~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
..+.+|++.+|.....+...
T Consensus 1265 -----nevs~wn~~~g~~~~vl~~s 1284 (1431)
T KOG1240|consen 1265 -----NEVSTWNMETGLRQTVLWAS 1284 (1431)
T ss_pred -----CceeeeecccCcceEEEEcC
Confidence 12788999888777766544
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-10 Score=112.48 Aligned_cols=212 Identities=11% Similarity=0.049 Sum_probs=128.2
Q ss_pred CceeEEEecCCCCeEEEe----cCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEE-EEECCC--cEEEEEcCCC
Q psy4571 67 PFLYDLVVNNYVANISCI----LNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFG-SVADDQ--KLMIWDTRSH 136 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~----~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~-~~~~dg--~v~vwd~~~~ 136 (437)
+.+....|++++..++.. ....+.+|++..++.. .++..+...+|+|+ +..|+ +.+.+| .|.+||++++
T Consensus 199 ~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPD-G~~La~~~~~~g~~~I~~~d~~tg 277 (429)
T PRK03629 199 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASG 277 (429)
T ss_pred CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCC-CCEEEEEEcCCCCcEEEEEECCCC
Confidence 356678888888877543 2346888887655322 23455678999995 55554 445555 4888898743
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE--eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw--d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
. ...+..+...+....|+|+|+.++++...++...|| |+.++. ...+..+........|+|+|+.+++++..
T Consensus 278 ---~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~--~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~ 351 (429)
T PRK03629 278 ---Q-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSN 351 (429)
T ss_pred ---C-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC--eEEeecCCCCccCEEECCCCCEEEEEEcc
Confidence 2 333444455678899999999744444445555555 665543 33343344456778999999975444443
Q ss_pred C--CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe---EEEEeCCCCCCceee
Q psy4571 215 D--RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI---MQEYCDSTDSDTKTM 289 (437)
Q Consensus 215 d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~ 289 (437)
+ ..|.+||+.++.... +... .......|+|||+. ++..+.++. +.++++. ++..+.+
T Consensus 352 ~g~~~I~~~dl~~g~~~~---------------Lt~~-~~~~~p~~SpDG~~-i~~~s~~~~~~~l~~~~~~-G~~~~~l 413 (429)
T PRK03629 352 GGQQHIAKQDLATGGVQV---------------LTDT-FLDETPSIAPNGTM-VIYSSSQGMGSVLNLVSTD-GRFKARL 413 (429)
T ss_pred CCCceEEEEECCCCCeEE---------------eCCC-CCCCCceECCCCCE-EEEEEcCCCceEEEEEECC-CCCeEEC
Confidence 3 358889987754211 1111 12345789999994 555555543 6777774 4344444
Q ss_pred eeeecccCCceeeeecC
Q psy4571 290 RLDSIRSNGGISSTASP 306 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~ 306 (437)
.. +...+...+|+|
T Consensus 414 ~~---~~~~~~~p~Wsp 427 (429)
T PRK03629 414 PA---TDGQVKFPAWSP 427 (429)
T ss_pred cc---CCCCcCCcccCC
Confidence 32 223345567776
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.9e-11 Score=110.46 Aligned_cols=263 Identities=10% Similarity=0.028 Sum_probs=152.5
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 119 (437)
++|+ |+++.++..+.|+.+.++|..+..+.... +.......+++++ +++++
T Consensus 42 ~~~s-~Dgr~~yv~~rdg~vsviD~~~~~~v~~i---------------------------~~G~~~~~i~~s~-DG~~~ 92 (369)
T PF02239_consen 42 LKFS-PDGRYLYVANRDGTVSVIDLATGKVVATI---------------------------KVGGNPRGIAVSP-DGKYV 92 (369)
T ss_dssp EE-T-T-SSEEEEEETTSEEEEEETTSSSEEEEE---------------------------E-SSEEEEEEE---TTTEE
T ss_pred EEec-CCCCEEEEEcCCCeEEEEECCcccEEEEE---------------------------ecCCCcceEEEcC-CCCEE
Confidence 3455 66666666666666666666665554432 2233456899999 45555
Q ss_pred E-EEECCCcEEEEEcCCCCCCCCeeeecc-------CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 120 G-SVADDQKLMIWDTRSHNVSKPSHTVDA-------HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 120 ~-~~~~dg~v~vwd~~~~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
+ +....+.+.++|.+ +.++++.+.. ...++..+..+|.....+++--+.+.|.+-|....+........
T Consensus 93 ~v~n~~~~~v~v~D~~---tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~ 169 (369)
T PF02239_consen 93 YVANYEPGTVSVIDAE---TLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIK 169 (369)
T ss_dssp EEEEEETTEEEEEETT---T--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE
T ss_pred EEEecCCCceeEeccc---cccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeec
Confidence 5 44578999999998 5566665532 23468888888988853444455588888898775543333333
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC-------------------------------------
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED------------------------------------- 234 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~------------------------------------- 234 (437)
.........|+|++++++++...++.|-++|..+.+.......
T Consensus 170 ~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~ 249 (369)
T PF02239_consen 170 VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTD 249 (369)
T ss_dssp --TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--
T ss_pred ccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCC
Confidence 4566788999999998777777777899999887643322110
Q ss_pred ----CCCCCCceEEEecCccccEEEEEEccCCCeEEEE---EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCC
Q psy4571 235 ----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS---VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPT 307 (437)
Q Consensus 235 ----~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s---~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 307 (437)
.....++.+......... .-+.-+|+++++.+. +...+.|.++|.++.+....+.. ........+.|+++
T Consensus 250 ~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~--~~~~~~~h~ef~~d 326 (369)
T PF02239_consen 250 PVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITP--GPGKRVVHMEFNPD 326 (369)
T ss_dssp TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHH--HHT--EEEEEE-TT
T ss_pred ccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEec--cCCCcEeccEECCC
Confidence 011222344444444444 567779999976665 46679999999999855544432 12233778899999
Q ss_pred CCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 308 ASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 308 g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
|+.+.....+..- .|.++|..|.++++.+.
T Consensus 327 G~~v~vS~~~~~~---------~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 327 GKEVWVSVWDGNG---------AIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp SSEEEEEEE--TT---------EEEEEETTTTEEEEEEE
T ss_pred CCEEEEEEecCCC---------EEEEEECCCcEEEEEEE
Confidence 9966544332220 17889998888877765
|
... |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.9e-11 Score=100.18 Aligned_cols=218 Identities=14% Similarity=0.071 Sum_probs=147.4
Q ss_pred EEecCceEEEEEeeecccccc---------CC-CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC
Q psy4571 82 SCILNISILFFEIIFTQNFPF---------PL-SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE 151 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~~~~---------~~-~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~ 151 (437)
.+-..|.|.++.........+ .. ..-++.|++ .+..++++..+|.+.+-+.... ..+..+..+.|..+
T Consensus 90 ~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~-~~~~i~vs~s~G~~~~v~~t~~-~le~vq~wk~He~E 167 (339)
T KOG0280|consen 90 DAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDIST-SGTKIFVSDSRGSISGVYETEM-VLEKVQTWKVHEFE 167 (339)
T ss_pred eccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeec-cCceEEEEcCCCcEEEEeccee-eeeeccccccccee
Confidence 455667777776433222211 11 134678888 5677888888999985554422 23445678899999
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE-eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
+...+|+-..++++.+|+.|+.+.-||++.++..+.. .+.|...|.+|.-+|..++.+++|+.|..|++||.++...+.
T Consensus 168 ~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl 247 (339)
T KOG0280|consen 168 AWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPL 247 (339)
T ss_pred eeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcc
Confidence 9999999888889999999999999999954543443 567899999999998877789999999999999999765332
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce--eeeeeecccCCceeeeecCCC
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK--TMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~s~~g 308 (437)
. . ..-.+.|..+.++|.-...+..++.-+-.+|-+.+.+.... .+.....+..-.....|....
T Consensus 248 ~-------------~-~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~ 313 (339)
T KOG0280|consen 248 F-------------K-AKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKD 313 (339)
T ss_pred c-------------c-CccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeecccccccc
Confidence 2 1 12237899999999765444455555557888887664432 222222233333333453333
Q ss_pred CcccccC
Q psy4571 309 SSTASES 315 (437)
Q Consensus 309 ~~l~s~s 315 (437)
..+|+++
T Consensus 314 ~~lATCs 320 (339)
T KOG0280|consen 314 SFLATCS 320 (339)
T ss_pred ceeeeee
Confidence 4566644
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-10 Score=112.38 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=133.4
Q ss_pred cCCCcceEEeeCCCCCEEEEEE-CCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVA-DDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT--VAL 176 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~-~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~l 176 (437)
.+..+....|+|+ ++.|+..+ .++ .|.++|+.+++ .+.+..+ .+.....+|+|||+.++++.+.+|. |.+
T Consensus 216 ~~~~~~~p~wSPD-G~~La~~s~~~g~~~L~~~dl~tg~-~~~lt~~---~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 216 SPEPLMSPAWSPD-GRKLAYVSFENRKAEIFVQDIYTQV-REKVTSF---PGINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred CCCcccCceECCC-CCEEEEEEecCCCcEEEEEECCCCC-eEEecCC---CCCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 3457788999994 56665544 333 58888887432 1122222 3334578999999986667777776 777
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe--EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+|+.+++ ...+..+.......+|+|+|+.++++...++. |.++|+.+++.. .+ +..++ ...
T Consensus 291 ~dl~tg~--~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~------------~L-t~~g~--~~~ 353 (448)
T PRK04792 291 VDIATKA--LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS------------RL-TFEGE--QNL 353 (448)
T ss_pred EECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE------------EE-ecCCC--CCc
Confidence 7887754 44455555667788999999976666655554 556666554321 11 12222 234
Q ss_pred EEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
..+|+|+|+.++++...++ .|.++|+.+++. ..+.. ........|+|||+.++..+.++.- ..+.
T Consensus 354 ~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~----~~~d~~ps~spdG~~I~~~~~~~g~--------~~l~ 420 (448)
T PRK04792 354 GGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTS----TRLDESPSVAPNGTMVIYSTTYQGK--------QVLA 420 (448)
T ss_pred CeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEccC----CCCCCCceECCCCCEEEEEEecCCc--------eEEE
Confidence 5689999996666555555 455578777643 22221 1122345899999988766543321 1155
Q ss_pred cccchhhhhhhhhcCCCccccccCCCC
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
++|. +|+..+.+..+...+....++|
T Consensus 421 ~~~~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 421 AVSI-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred EEEC-CCCceEECcCCCCCcCCCccCC
Confidence 6665 5666666665555555555554
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-10 Score=110.87 Aligned_cols=203 Identities=12% Similarity=0.108 Sum_probs=128.5
Q ss_pred eEEEEEeeeccc--c-ccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQN--F-PFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~~--~-~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
.|.++|...... + .....+...+|+| +++.|+.+..+ ..|++||+.++ +. ..+..+.+.+.+++|+|+|
T Consensus 171 ~l~~~d~~g~~~~~l~~~~~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g---~~-~~~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 171 ELQVADYDGANPQTITRSREPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATG---QR-EKVASFPGMNGAPAFSPDG 245 (417)
T ss_pred eEEEEcCCCCCCEEeecCCCceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCC---CE-EEeecCCCCccceEECCCC
Confidence 466666532221 1 2233577889999 56777666543 47999999843 22 2333455667789999999
Q ss_pred CcEEEEEeCCC--eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 162 ~~~l~sgs~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+.++++.+.++ .|.+||+.++. ...+..+........|+|+|+.++++...++ .|.++|+.+++.
T Consensus 246 ~~l~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~--------- 314 (417)
T TIGR02800 246 SKLAVSLSKDGNPDIYVMDLDGKQ--LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV--------- 314 (417)
T ss_pred CEEEEEECCCCCccEEEEECCCCC--EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE---------
Confidence 97556666655 48888988754 3444455555567899999997555554444 477777765421
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC---eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN---IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
..+..+......+.|+|+|+ .++.++.++ .|.+||+.++.. +.+.. ........|+|||+.++..
T Consensus 315 ------~~l~~~~~~~~~~~~spdg~-~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~----~~~~~~p~~spdg~~l~~~ 382 (417)
T TIGR02800 315 ------RRLTFRGGYNASPSWSPDGD-LIAFVHREGGGFNIAVMDLDGGGE-RVLTD----TGLDESPSFAPNGRMILYA 382 (417)
T ss_pred ------EEeecCCCCccCeEECCCCC-EEEEEEccCCceEEEEEeCCCCCe-EEccC----CCCCCCceECCCCCEEEEE
Confidence 11223344567789999999 455555554 788999887532 22221 1123345899999988877
Q ss_pred CCCC
Q psy4571 315 SPTP 318 (437)
Q Consensus 315 s~d~ 318 (437)
+.++
T Consensus 383 ~~~~ 386 (417)
T TIGR02800 383 TTRG 386 (417)
T ss_pred EeCC
Confidence 6654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-10 Score=108.21 Aligned_cols=210 Identities=14% Similarity=0.182 Sum_probs=156.0
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee---CCCCCEEEE
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH---LLHESLFGS 121 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s---p~~~~~l~~ 121 (437)
|...++|....||.+|+|+...+.++.-.. | .....+.++-..|.+..+.. +....++.+- ..+-.+++-
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~-p---~~~~s~t~~~~~w~L~~~~s---~~k~~~~~~~~~~s~~t~~lvl 75 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFA-P---IASLSGTCTYTKWGLSADYS---PMKWLSLEKAKKASLDTSMLVL 75 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeec-c---chhccCcceeEEEEEEeccc---hHHHHhHHHHhhccCCceEEEe
Confidence 567888999999999999987777664322 2 12233344455565332211 1111111111 114567888
Q ss_pred EECCCcEEEEEcCCCCCCCCeeee--ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEE
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v 199 (437)
|...|.|.+|++..+ +....+ ..|.+.|.++.++.+-. .|.|++.|+.+..|+...... ...+.+.+..+.++
T Consensus 76 gt~~g~v~~ys~~~g---~it~~~st~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~~-~~~~~~~~~~~~sl 150 (541)
T KOG4547|consen 76 GTPQGSVLLYSVAGG---EITAKLSTDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKVI-IRIWKEQKPLVSSL 150 (541)
T ss_pred ecCCccEEEEEecCC---eEEEEEecCCCCCcceeeecccccC-ceEecCCceeEEEEeccccee-eeeeccCCCccceE
Confidence 999999999999843 333333 47999999999998877 499999999999999998554 77888888899999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC-----CCeEEEEEeCCCe
Q psy4571 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN-----EPWVICSVSEDNI 274 (437)
Q Consensus 200 ~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~-----~~~~l~s~~~dg~ 274 (437)
+.+||+. ++++|+ +.|++||+.+. +.+..+.||.++|++++|... |.++|.+...+..
T Consensus 151 ~is~D~~-~l~~as--~~ik~~~~~~k--------------evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~ 213 (541)
T KOG4547|consen 151 CISPDGK-ILLTAS--RQIKVLDIETK--------------EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERG 213 (541)
T ss_pred EEcCCCC-EEEecc--ceEEEEEccCc--------------eEEEEecCCCcceEEEEEEEeccccccceeeeccccccc
Confidence 9999998 577775 58999999986 556679999999999999887 7778877788888
Q ss_pred EEEEeCCCC
Q psy4571 275 MQEYCDSTD 283 (437)
Q Consensus 275 i~iwd~~~~ 283 (437)
+.+|-++..
T Consensus 214 i~~w~v~~~ 222 (541)
T KOG4547|consen 214 ITVWVVEKE 222 (541)
T ss_pred eeEEEEEcc
Confidence 999987653
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.7e-12 Score=129.28 Aligned_cols=202 Identities=15% Similarity=0.227 Sum_probs=148.9
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeec-CCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+++++.+|.++.=+ |.....+||+.||.+++|.- +...++..... -+..|+.
T Consensus 2204 ~k~~v~~v~r~~sH-p~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~--------------------------g~s~vtr 2256 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSH-PSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTA--------------------------GNSRVTR 2256 (2439)
T ss_pred eecccCceeeecCC-CCCceEEecCCCceEEEEeccCCCeEEEeecc--------------------------Ccchhhh
Confidence 34566677777766 77778888888888888873 22222222110 1246778
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe---CCCeEEEEeCCCCcee
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS---ADKTVALWDLRNLKLK 185 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs---~dg~i~lwd~~~~~~~ 185 (437)
+.|+. .|+.+..+..||.+.+|... .++....+.|.....++.|-. . ++++++ .++.+.+||..-....
T Consensus 2257 ~~f~~-qGnk~~i~d~dg~l~l~q~~----pk~~~s~qchnk~~~Df~Fi~--s-~~~tag~s~d~~n~~lwDtl~~~~~ 2328 (2439)
T KOG1064|consen 2257 SRFNH-QGNKFGIVDGDGDLSLWQAS----PKPYTSWQCHNKALSDFRFIG--S-LLATAGRSSDNRNVCLWDTLLPPMN 2328 (2439)
T ss_pred hhhcc-cCCceeeeccCCceeecccC----CcceeccccCCccccceeeee--h-hhhccccCCCCCcccchhcccCccc
Confidence 89998 67888899999999999987 577778889999999999875 3 466664 4788999997643322
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
-..-..|.+.++++++.|..+ +|++||.+|.|++||++..+.... + .. +. .+..
T Consensus 2329 s~v~~~H~~gaT~l~~~P~~q-llisggr~G~v~l~D~rqrql~h~--------------~-----~~----~~--~~~~ 2382 (2439)
T KOG1064|consen 2329 SLVHTCHDGGATVLAYAPKHQ-LLISGGRKGEVCLFDIRQRQLRHT--------------F-----QA----LD--TREY 2382 (2439)
T ss_pred ceeeeecCCCceEEEEcCcce-EEEecCCcCcEEEeehHHHHHHHH--------------h-----hh----hh--hhhe
Confidence 223378999999999999988 799999999999999987543222 1 11 33 3337
Q ss_pred EEEEeCCCeEEEEeCCCCCCceeeeee
Q psy4571 266 ICSVSEDNIMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~~~~~~~~~~ 292 (437)
+++|+..|.++||++..-..+..+...
T Consensus 2383 f~~~ss~g~ikIw~~s~~~ll~~~p~e 2409 (2439)
T KOG1064|consen 2383 FVTGSSEGNIKIWRLSEFGLLHTFPSE 2409 (2439)
T ss_pred eeccCcccceEEEEccccchhhcCchh
Confidence 889999999999999988777766643
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.9e-12 Score=118.95 Aligned_cols=240 Identities=19% Similarity=0.255 Sum_probs=164.9
Q ss_pred CCcceEEeeCCC-CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLH-ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
-.|.++.|+|.. ..+-++......-.+|++........-..+.+|...|+.+.|+|+.+.++++++.|-.+..||+++.
T Consensus 68 w~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp 147 (1081)
T KOG0309|consen 68 WQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP 147 (1081)
T ss_pred chhcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC
Confidence 346678888742 2344444445556689998766666677888999999999999999999999999999999999998
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
..++..+..-......++|+-..+.++| .+..+.|++||++.+. .++...++|...|+.++|..--
T Consensus 148 ~~p~ys~~~w~s~asqVkwnyk~p~vla-sshg~~i~vwd~r~gs-------------~pl~s~K~~vs~vn~~~fnr~~ 213 (1081)
T KOG0309|consen 148 HRPFYSTSSWRSAASQVKWNYKDPNVLA-SSHGNDIFVWDLRKGS-------------TPLCSLKGHVSSVNSIDFNRFK 213 (1081)
T ss_pred CcceeeeecccccCceeeecccCcchhh-hccCCceEEEeccCCC-------------cceEEecccceeeehHHHhhhh
Confidence 8877777666667788999887776554 4556789999999875 4456788899999999997654
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh-hh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC-EE 341 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-~~ 341 (437)
...+.+++.|++|+.||.+........... ....+....+-|-|.-...--..|-..+....-...-..|+..++ +.
T Consensus 214 ~s~~~s~~~d~tvkfw~y~kSt~e~~~~vt--t~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~p 291 (1081)
T KOG0309|consen 214 YSEIMSSSNDGTVKFWDYSKSTTESKRTVT--TNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTP 291 (1081)
T ss_pred hhhhcccCCCCceeeecccccccccceecc--ccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcc
Confidence 446789999999999998765433222211 122333445566554222221111112221111111345565554 46
Q ss_pred hhhhcCCCccccccCCCC
Q psy4571 342 QRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~~~~ 359 (437)
++++.||.+.|....+..
T Consensus 292 Vh~F~GH~D~V~eFlWR~ 309 (1081)
T KOG0309|consen 292 VHTFVGHDDVVLEFLWRK 309 (1081)
T ss_pred eeeecCcchHHHHHhhhh
Confidence 799999999888776544
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-09 Score=101.64 Aligned_cols=237 Identities=10% Similarity=0.057 Sum_probs=137.3
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
.+.|+| +++++.+++.||.|.++|+. ..+.+..++... ...++++++||++++++...++.+.++|.++.+. +.
T Consensus 41 ~~~~s~-Dgr~~yv~~rdg~vsviD~~---~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~-v~ 114 (369)
T PF02239_consen 41 GLKFSP-DGRYLYVANRDGTVSVIDLA---TGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEP-VK 114 (369)
T ss_dssp EEE-TT--SSEEEEEETTSEEEEEETT---SSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--E-EE
T ss_pred EEEecC-CCCEEEEEcCCCeEEEEECC---cccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccc-ee
Confidence 467888 67788888999999999999 556777776533 5688999999998666777899999999999665 55
Q ss_pred Eecc-------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 188 SFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 188 ~~~~-------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.+.. ....+..+..+|..+.++++--.-+.|.+-|....... ...............|+|
T Consensus 115 ~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~-------------~~~~i~~g~~~~D~~~dp 181 (369)
T PF02239_consen 115 TIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL-------------KVTTIKVGRFPHDGGFDP 181 (369)
T ss_dssp EEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE-------------EEEEEE--TTEEEEEE-T
T ss_pred ecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc-------------ceeeecccccccccccCc
Confidence 5432 23467788888888854555555578888887764221 111222334567889999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC-CcccccC-CCCcccccccccccccccccchh
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA-SSTASES-PTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
++++++++...++.|.++|..+++....+......+.+...-..+|.. ...+++. ....+.....+ .+.+||..+
T Consensus 182 dgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~---~v~v~d~~~ 258 (369)
T PF02239_consen 182 DGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTD---PVSVHDDYA 258 (369)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE-----TTT-STTTB
T ss_pred ccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCC---ccccchhhc
Confidence 999888777788899999999887766554322222111111123322 1111111 11111111111 156788888
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+.++.+...... ..+..+|++..+...
T Consensus 259 wkvv~~I~~~G~g-lFi~thP~s~~vwvd 286 (369)
T PF02239_consen 259 WKVVKTIPTQGGG-LFIKTHPDSRYVWVD 286 (369)
T ss_dssp TSEEEEEE-SSSS---EE--TT-SEEEEE
T ss_pred CeEEEEEECCCCc-ceeecCCCCccEEee
Confidence 8888877665444 555567777654443
|
... |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.7e-10 Score=109.69 Aligned_cols=202 Identities=9% Similarity=0.057 Sum_probs=124.2
Q ss_pred EEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC
Q psy4571 89 ILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 89 i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
|.++|...... ......+...+|+| +++.|+..+.+ ..|.+||+.++. . ..+....+.+...+|+|+|+
T Consensus 181 l~~~d~~g~~~~~l~~~~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~---~-~~l~~~~g~~~~~~~SpDG~ 255 (430)
T PRK00178 181 LQRSDYDGARAVTLLQSREPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGR---R-EQITNFEGLNGAPAWSPDGS 255 (430)
T ss_pred EEEECCCCCCceEEecCCCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCC---E-EEccCCCCCcCCeEECCCCC
Confidence 55666543221 12345678889999 46666555433 368889997432 1 22223334456789999999
Q ss_pred cEEEEEeCCC--eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 163 ~~l~sgs~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+++++.+.+| .|.++|++++. ...+..+........|+|+|+.++++...++ .|+++|+.+++...
T Consensus 256 ~la~~~~~~g~~~Iy~~d~~~~~--~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-------- 325 (430)
T PRK00178 256 KLAFVLSKDGNPEIYVMDLASRQ--LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-------- 325 (430)
T ss_pred EEEEEEccCCCceEEEEECCCCC--eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE--------
Confidence 7555666666 58888998754 3445555566677899999997666655554 46677776543211
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+ ...+ .......|+|+|+.++++...++ .|.++|+.+++. ..+.. ........|+|||+.++..+.
T Consensus 326 ----l-t~~~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt~----~~~~~~p~~spdg~~i~~~~~ 393 (430)
T PRK00178 326 ----V-TFVG--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILTD----TSLDESPSVAPNGTMLIYATR 393 (430)
T ss_pred ----e-ecCC--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEccC----CCCCCCceECCCCCEEEEEEe
Confidence 1 1112 12345689999996555554444 588899988753 22221 112234589999998887654
Q ss_pred C
Q psy4571 317 T 317 (437)
Q Consensus 317 d 317 (437)
+
T Consensus 394 ~ 394 (430)
T PRK00178 394 Q 394 (430)
T ss_pred c
Confidence 3
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-09 Score=101.33 Aligned_cols=205 Identities=11% Similarity=0.089 Sum_probs=130.2
Q ss_pred CCcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCe-eeec----------cCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPS-HTVD----------AHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~-~~~~----------~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
.....++++|+ +++|+++. .+|.|.++++......... .... .......++.|+|++++++++.-..
T Consensus 87 ~~p~~i~~~~~-g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~ 165 (345)
T PF10282_consen 87 SSPCHIAVDPD-GRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA 165 (345)
T ss_dssp SCEEEEEECTT-SSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred CCcEEEEEecC-CCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC
Confidence 44567899994 55555554 6899999999853221111 1110 1134578999999999866665556
Q ss_pred CeEEEEeCCCCceee---eEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 172 KTVALWDLRNLKLKL---HSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 172 g~i~lwd~~~~~~~~---~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
..|.+|+++.....+ ..+ .........++|+|++++++++...++.|.++++....... +.+....
T Consensus 166 D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~----------~~~~~~~ 235 (345)
T PF10282_consen 166 DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSL----------TEIQTIS 235 (345)
T ss_dssp TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE----------EEEEEEE
T ss_pred CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCce----------eEEEEee
Confidence 789999998755212 111 13345678999999999877888889999999998322111 1111111
Q ss_pred ----C--ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecCCCCcccccCCC-Cc
Q psy4571 248 ----G--HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-PT 319 (437)
Q Consensus 248 ----~--h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-~~ 319 (437)
+ .......|+++|+|+++.++...++.|.+|++.. ...+..+.........+..++++|+|++|+++..+ +.
T Consensus 236 ~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~ 315 (345)
T PF10282_consen 236 TLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNT 315 (345)
T ss_dssp SCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTE
T ss_pred eccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCe
Confidence 1 1126789999999998888888899999999943 22333333333234457778999999998877644 44
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-10 Score=108.32 Aligned_cols=239 Identities=13% Similarity=0.102 Sum_probs=161.2
Q ss_pred ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee--------------------------eeccCC-
Q psy4571 97 TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--------------------------TVDAHT- 149 (437)
Q Consensus 97 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--------------------------~~~~h~- 149 (437)
.+.+.++...+.|..+|++..++|+|...-.|++||+..-. .+.-+ .+.-|.
T Consensus 45 iQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS-LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak 123 (703)
T KOG2321|consen 45 IQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS-LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK 123 (703)
T ss_pred HHhcCCccccceeEecCCCcEEEEecccCCceEEEEcccce-eeeeecccccceeEEEeccchhhheEeecCceeeehhh
Confidence 45566788899999999877788899999999999997421 00000 001110
Q ss_pred ----------CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 150 ----------AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 150 ----------~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
..-.+++++.-... |+.++....|.=++++.++- +..+....++++++..++... +|++|+.||.|-
T Consensus 124 ~G~hy~~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGrf-L~P~~~~~~~lN~v~in~~hg-Lla~Gt~~g~VE 200 (703)
T KOG2321|consen 124 YGRHYRTRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGRF-LNPFETDSGELNVVSINEEHG-LLACGTEDGVVE 200 (703)
T ss_pred cCeeeeeecCcCCccccccCCCcc-EEEeecCcceEEEEcccccc-ccccccccccceeeeecCccc-eEEecccCceEE
Confidence 11223444433343 55555556788888888776 667776778999999999886 799999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCcc-----ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-----AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
.||.+.......+..... ...|. ..|+++.|+.+|- -++.|..+|.+.|||+++.+++..-. ..
T Consensus 201 fwDpR~ksrv~~l~~~~~--------v~s~pg~~~~~svTal~F~d~gL-~~aVGts~G~v~iyDLRa~~pl~~kd--h~ 269 (703)
T KOG2321|consen 201 FWDPRDKSRVGTLDAASS--------VNSHPGGDAAPSVTALKFRDDGL-HVAVGTSTGSVLIYDLRASKPLLVKD--HG 269 (703)
T ss_pred Eecchhhhhheeeecccc--------cCCCccccccCcceEEEecCCce-eEEeeccCCcEEEEEcccCCceeecc--cC
Confidence 999998776555332111 12232 3499999999886 68899999999999999987654332 11
Q ss_pred ccCCceeeeecCCC--CcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 295 RSNGGISSTASPTA--SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 295 ~~~~~~~~~~s~~g--~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
.......+.|-+.+ ..+++.. ..+ +++||-.+|+....+....+ +...++-|++..
T Consensus 270 ~e~pi~~l~~~~~~~q~~v~S~D--k~~----------~kiWd~~~Gk~~asiEpt~~-lND~C~~p~sGm 327 (703)
T KOG2321|consen 270 YELPIKKLDWQDTDQQNKVVSMD--KRI----------LKIWDECTGKPMASIEPTSD-LNDFCFVPGSGM 327 (703)
T ss_pred CccceeeecccccCCCceEEecc--hHH----------hhhcccccCCceeeccccCC-cCceeeecCCce
Confidence 23344555675553 3444433 222 89999999998887766554 666666665443
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.9e-12 Score=109.08 Aligned_cols=183 Identities=16% Similarity=0.206 Sum_probs=128.3
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
-++||| +++++|+++.- .+.|-|.+ +.+..+.+.. -..|.-+.|..|..++|...+.|+.|.+|++...+. ..
T Consensus 13 ~c~fSp-~g~yiAs~~~y-rlviRd~~---tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew-~c 85 (447)
T KOG4497|consen 13 FCSFSP-CGNYIASLSRY-RLVIRDSE---TLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW-YC 85 (447)
T ss_pred ceeECC-CCCeeeeeeee-EEEEeccc---hhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeeccee-EE
Confidence 578999 78999988865 78888887 3333322222 346888999999999889999999999999998776 66
Q ss_pred EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 188 ~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
.+.....++..++|+|+|+++|.+...|-+|.||.+.+.+... ..-.+..+..++|+|+|+ +.+
T Consensus 86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~---------------~~~pK~~~kg~~f~~dg~-f~a 149 (447)
T KOG4497|consen 86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL---------------LPHPKTNVKGYAFHPDGQ-FCA 149 (447)
T ss_pred EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE---------------ecccccCceeEEECCCCc-eee
Confidence 7777788999999999999999999999999999998854321 222234568899999999 555
Q ss_pred EEeCCCeEEEEeCCC---CCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 268 SVSEDNIMQEYCDST---DSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 268 s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
..+.-...-..++.. ...++.+.. .......+.|+|||..++.=..
T Consensus 150 i~sRrDCkdyv~i~~c~~W~ll~~f~~---dT~DltgieWsPdg~~laVwd~ 198 (447)
T KOG4497|consen 150 ILSRRDCKDYVQISSCKAWILLKEFKL---DTIDLTGIEWSPDGNWLAVWDN 198 (447)
T ss_pred eeecccHHHHHHHHhhHHHHHHHhcCC---CcccccCceECCCCcEEEEecc
Confidence 554322211222221 112222222 1223445689999998886543
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-10 Score=97.72 Aligned_cols=197 Identities=12% Similarity=0.171 Sum_probs=138.5
Q ss_pred CCcceEEeeC--CCCC-EEEEEECCCcEEEEEcCCCCCCCCeeeecc---CCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 104 LSRQDVAWHL--LHES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDA---HTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 104 ~~v~~~~~sp--~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
..+..+.|.. .++. .++-+...|.|.++..........+..+.. ......++.|++.+.. ++++..+|.+.+-
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~-i~vs~s~G~~~~v 148 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTK-IFVSDSRGSISGV 148 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCce-EEEEcCCCcEEEE
Confidence 4566777753 2344 667778889999998763221111111111 1113567889999986 9999999999955
Q ss_pred eCCCCc-eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE-ecCccccEEE
Q psy4571 178 DLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-HGGHTAKISD 255 (437)
Q Consensus 178 d~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~ 255 (437)
+..... +.++.++.|..+.....|+-..+.++.+|+.|+.+..||++..+ +.++. .+.|...|.+
T Consensus 149 ~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-------------~~i~~n~kvH~~GV~S 215 (339)
T KOG0280|consen 149 YETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-------------TFIWHNSKVHTSGVVS 215 (339)
T ss_pred ecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-------------ceeeecceeeecceEE
Confidence 554322 22457889999999999998888899999999999999999432 22222 5678899999
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecCCCC--cccccCCCC
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASPTAS--STASESPTP 318 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~--~l~s~s~d~ 318 (437)
|.-+|..+..++||+.|..|++||.++ ++++..-. ..+++..+..+|.-. .++.+-.+|
T Consensus 216 I~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~----v~GGVWRi~~~p~~~~~lL~~CMh~G 277 (339)
T KOG0280|consen 216 IYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK----VGGGVWRIKHHPEIFHRLLAACMHNG 277 (339)
T ss_pred EecCCCCCceEEEeccccceeeeehhcccCccccCc----cccceEEEEecchhhhHHHHHHHhcC
Confidence 999988777999999999999999994 44544433 246777777777543 555555555
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.9e-12 Score=113.64 Aligned_cols=208 Identities=19% Similarity=0.243 Sum_probs=149.2
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeE
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRL 218 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i 218 (437)
....+..|.+.|..+.|+..|. +|++|+.|..|.+||.......+.-..+|...|....|-|. .+. +++++.||.+
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd-~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~t-i~~~s~dgqv 211 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGD-VLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRT-IVTSSRDGQV 211 (559)
T ss_pred hhhcccCCCCccceeeecccCc-eeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcC-ceeccccCce
Confidence 3346778999999999999999 59999999999999999877645555678888888888875 343 8899999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC-
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN- 297 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~- 297 (437)
++=.+...+.... ...+..|.++|..++.-|+.++-|.+++.|+.+.-.|++.+.+...+........
T Consensus 212 r~s~i~~t~~~e~-----------t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~ 280 (559)
T KOG1334|consen 212 RVSEILETGYVEN-----------TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKE 280 (559)
T ss_pred eeeeeccccceec-----------ceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCcc
Confidence 9887765543332 2335678999999999999998999999999999999999877766654433333
Q ss_pred --CceeeeecCCCC-cccccCCCCcccccccccccccccccch-hhhhhhhhcCC------CccccccCCCCCCcccccc
Q psy4571 298 --GGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDIL-VCEEQRQLLGT------EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 298 --~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~-~~~~~~~~~~h------~~~~~~~~~~~~~~~~~~~ 367 (437)
+...++..|... .+++|+.|..+++++.. -.+.. ....+.++..| .-.+.++.++.++.+++.+
T Consensus 281 ~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R------~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaS 354 (559)
T KOG1334|consen 281 RVGLYTIAVDPRNTNEFAVGGSDQFARVYDQR------RIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLAS 354 (559)
T ss_pred ceeeeeEecCCCCccccccCChhhhhhhhccc------chhhccccchhhhcCCccccccCcccceeEEecCCccceeee
Confidence 334457778666 88899998885444421 11111 11112333222 2246677788777766654
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.8e-10 Score=109.35 Aligned_cols=203 Identities=16% Similarity=0.104 Sum_probs=127.7
Q ss_pred cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC---CeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
.|.++|... .....+..+...+...+|+|+|++ |+.++.+ ..|.+||+.+++. ..+..+.+.+.+.+|+|
T Consensus 171 ~l~~~d~~g----~~~~~l~~~~~~~~~p~~Spdg~~-la~~~~~~~~~~i~v~d~~~g~~--~~~~~~~~~~~~~~~sp 243 (417)
T TIGR02800 171 ELQVADYDG----ANPQTITRSREPILSPAWSPDGQK-LAYVSFESGKPEIYVQDLATGQR--EKVASFPGMNGAPAFSP 243 (417)
T ss_pred eEEEEcCCC----CCCEEeecCCCceecccCCCCCCE-EEEEEcCCCCcEEEEEECCCCCE--EEeecCCCCccceEECC
Confidence 577777652 223444456667899999999997 5555433 4799999998653 23334556677899999
Q ss_pred CCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEe
Q psy4571 204 HNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYC 279 (437)
Q Consensus 204 ~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd 279 (437)
+|+.++++.+.++ .|++||+.++... .+..+........|+|+|+.++++...++ .|+++|
T Consensus 244 Dg~~l~~~~~~~~~~~i~~~d~~~~~~~---------------~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d 308 (417)
T TIGR02800 244 DGSKLAVSLSKDGNPDIYVMDLDGKQLT---------------RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMD 308 (417)
T ss_pred CCCEEEEEECCCCCccEEEEECCCCCEE---------------ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 9987666666555 4888888765321 12233334456789999995555544443 588888
Q ss_pred CCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
+.+++. ..+.. .........|+|+|++++..+.+.. ...+.++|+.++.. ..+.... ......++|
T Consensus 309 ~~~~~~-~~l~~---~~~~~~~~~~spdg~~i~~~~~~~~--------~~~i~~~d~~~~~~-~~l~~~~-~~~~p~~sp 374 (417)
T TIGR02800 309 ADGGEV-RRLTF---RGGYNASPSWSPDGDLIAFVHREGG--------GFNIAVMDLDGGGE-RVLTDTG-LDESPSFAP 374 (417)
T ss_pred CCCCCE-EEeec---CCCCccCeEECCCCCEEEEEEccCC--------ceEEEEEeCCCCCe-EEccCCC-CCCCceECC
Confidence 876643 22221 2233455689999999888765541 01277888877543 3333222 234456888
Q ss_pred CCcccc
Q psy4571 360 NDTEDL 365 (437)
Q Consensus 360 ~~~~~~ 365 (437)
+|..++
T Consensus 375 dg~~l~ 380 (417)
T TIGR02800 375 NGRMIL 380 (417)
T ss_pred CCCEEE
Confidence 887543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.4e-09 Score=98.71 Aligned_cols=242 Identities=10% Similarity=0.048 Sum_probs=147.3
Q ss_pred CCcceEEeeCCCCCEEEEEEC----CCcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVAD----DQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~----dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.....++++| ++++|.++.. +|.|..|++... .....+............++++|++++++++...+|+|.+++
T Consensus 37 ~~Ps~l~~~~-~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~ 115 (345)
T PF10282_consen 37 ENPSWLAVSP-DGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFP 115 (345)
T ss_dssp SSECCEEE-T-TSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEe-CCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEE
Confidence 4556789999 5666666665 579999998754 233344444434456678999999998555556799999999
Q ss_pred CCCCceeeeE--ec-----------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 179 LRNLKLKLHS--FE-----------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 179 ~~~~~~~~~~--~~-----------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
+......... .. .-.....++.++|++++++++.-....|.+|++........ .....
T Consensus 116 l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~---------~~~~~ 186 (345)
T PF10282_consen 116 LDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLT---------PVDSI 186 (345)
T ss_dssp ECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEE---------EEEEE
T ss_pred ccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEE---------Eeecc
Confidence 9874331211 11 12345789999999997666655566899999987542111 00111
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC--CCCC--ceeeeeeec---ccCCceeeeecCCCCcccccCC-C
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS--TDSD--TKTMRLDSI---RSNGGISSTASPTASSTASESP-T 317 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~--~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~-d 317 (437)
........+.+.|+|+++++.+....++.|.++++. ++.. .+.+..... .......+.++|||++|.+... .
T Consensus 187 ~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~ 266 (345)
T PF10282_consen 187 KVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGS 266 (345)
T ss_dssp ECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTT
T ss_pred ccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccC
Confidence 123345678999999999888888899999999998 3321 122221110 1113455689999998776543 3
Q ss_pred Ccccccccccccccccccc--hhhhhh--hhhcCCCccccccCCCCCCccccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDI--LVCEEQ--RQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~--~~~~~~--~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
.. |.++++ .+|++. ..+.........+.++|+|+.+..
T Consensus 267 ~s-----------I~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~V 308 (345)
T PF10282_consen 267 NS-----------ISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYV 308 (345)
T ss_dssp TE-----------EEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEE
T ss_pred CE-----------EEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 33 667776 233321 222222233566778888886654
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.3e-10 Score=107.61 Aligned_cols=204 Identities=12% Similarity=0.045 Sum_probs=126.5
Q ss_pred cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC--CeEEEEeCCCCceeeeEeccCCCceEEEEEcCC
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d--g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~ 204 (437)
.|.++|.+. .....+..+...+...+|+|+|+.++++...+ ..|.+||+.+++. ..+....+.+...+|+|+
T Consensus 180 ~l~~~d~~g----~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~--~~l~~~~g~~~~~~~SpD 253 (430)
T PRK00178 180 TLQRSDYDG----ARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR--EQITNFEGLNGAPAWSPD 253 (430)
T ss_pred EEEEECCCC----CCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE--EEccCCCCCcCCeEECCC
Confidence 366777762 22344445677899999999999744444333 3588999987653 233334445567899999
Q ss_pred CCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeC
Q psy4571 205 NETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCD 280 (437)
Q Consensus 205 ~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~ 280 (437)
|+.++++.+.+| .|.++|+.++... .+..+........|+|+|+.++++...+| .|+++|+
T Consensus 254 G~~la~~~~~~g~~~Iy~~d~~~~~~~---------------~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~ 318 (430)
T PRK00178 254 GSKLAFVLSKDGNPEIYVMDLASRQLS---------------RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318 (430)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCeE---------------EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence 997655666665 5888898875321 12334444566789999996665554443 5777888
Q ss_pred CCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCC
Q psy4571 281 STDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDN 360 (437)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~ 360 (437)
.+++.. .+.. .........|+|||+.++..+.... ...+.++|+.+++. +.+..- .......++|+
T Consensus 319 ~~g~~~-~lt~---~~~~~~~~~~Spdg~~i~~~~~~~~--------~~~l~~~dl~tg~~-~~lt~~-~~~~~p~~spd 384 (430)
T PRK00178 319 NGGRAE-RVTF---VGNYNARPRLSADGKTLVMVHRQDG--------NFHVAAQDLQRGSV-RILTDT-SLDESPSVAPN 384 (430)
T ss_pred CCCCEE-Eeec---CCCCccceEECCCCCEEEEEEccCC--------ceEEEEEECCCCCE-EEccCC-CCCCCceECCC
Confidence 777532 2221 1122334589999999887654321 01277889888764 333221 12224578888
Q ss_pred Ccccc
Q psy4571 361 DTEDL 365 (437)
Q Consensus 361 ~~~~~ 365 (437)
|..++
T Consensus 385 g~~i~ 389 (430)
T PRK00178 385 GTMLI 389 (430)
T ss_pred CCEEE
Confidence 87554
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-09 Score=104.55 Aligned_cols=242 Identities=10% Similarity=0.048 Sum_probs=133.1
Q ss_pred eEEEEEeeecccccc---CCCcceEEeeCCCCC--EEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 88 SILFFEIIFTQNFPF---PLSRQDVAWHLLHES--LFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~---~~~v~~~~~sp~~~~--~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
.|.+.|........+ ......-+|+|++.. ++++...+| .|.+.++..++ .+.+..+ .+.....+|+||
T Consensus 166 ~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~-~~~lt~~---~g~~~~p~wSPD 241 (428)
T PRK01029 166 ELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA-GKKILAL---QGNQLMPTFSPR 241 (428)
T ss_pred eEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC-ceEeecC---CCCccceEECCC
Confidence 455555433322222 234566799996444 223444444 57777887442 2333333 344556899999
Q ss_pred CCcEEEEEeCCC----eEEEEeCCCC--ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc--CCCCCCCCC
Q psy4571 161 SEYILATGSADK----TVALWDLRNL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL--SKIGEEQST 232 (437)
Q Consensus 161 ~~~~l~sgs~dg----~i~lwd~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~--~~~~~~~~~ 232 (437)
|++++++...+| .+.+|++..+ ..+........+.....+|+|||+.++.+...+|...+|.+ ......
T Consensus 242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~--- 318 (428)
T PRK01029 242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS--- 318 (428)
T ss_pred CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc---
Confidence 997555554333 3455777652 22122222222345678999999975555556776555544 321110
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC--CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
...+..+...+....|+|||+.++++...+ ..|.+||+.+++... +.. .........|+|||+.
T Consensus 319 ----------~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~---~~~~~~~p~wSpDG~~ 384 (428)
T PRK01029 319 ----------PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTT---SPENKESPSWAIDSLH 384 (428)
T ss_pred ----------eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccC---CCCCccceEECCCCCE
Confidence 111233344567889999999655554433 469999999886532 221 1123345789999998
Q ss_pred ccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 311 TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 311 l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
++..+.+.. ...+.++|+..++.. .+...........++|
T Consensus 385 L~f~~~~~g--------~~~L~~vdl~~g~~~-~Lt~~~g~~~~p~Ws~ 424 (428)
T PRK01029 385 LVYSAGNSN--------ESELYLISLITKKTR-KIVIGSGEKRFPSWGA 424 (428)
T ss_pred EEEEECCCC--------CceEEEEECCCCCEE-EeecCCCcccCceecC
Confidence 775433211 122778888776643 3332223344444544
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.3e-10 Score=96.26 Aligned_cols=163 Identities=18% Similarity=0.265 Sum_probs=123.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.+.+++++.+++ ....|+.|-..|++.-+.+... +.....+....|..+|..+-|+...+. +++.+.|..+.---.+
T Consensus 67 mP~~~~~~~y~~-e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~-V~s~~~dk~~~~hc~e 144 (404)
T KOG1409|consen 67 MPSPCSAMEYVS-ESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEW-VLSTGKDKQFAWHCTE 144 (404)
T ss_pred CCCCceEeeeec-cceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCcee-EEEeccccceEEEeec
Confidence 577899999999 6788889999999988877532 123345566688899999998876664 6676666544322111
Q ss_pred CC----------------------------------------ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE
Q psy4571 181 NL----------------------------------------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220 (437)
Q Consensus 181 ~~----------------------------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v 220 (437)
.+ -.++.++.+|.+.+++++|.|... +|.+|..|..+.+
T Consensus 145 ~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~-~LfSg~~d~~vi~ 223 (404)
T KOG1409|consen 145 SGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQR-LLFSGASDHSVIM 223 (404)
T ss_pred cCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCc-EEEeccccCceEE
Confidence 11 123566788999999999999876 7999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
||+..... ......+|...|..+..-+.-+ .+.+++.||.|.+|+.+
T Consensus 224 wdigg~~g-------------~~~el~gh~~kV~~l~~~~~t~-~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 224 WDIGGRKG-------------TAYELQGHNDKVQALSYAQHTR-QLISCGEDGGIVVWNMN 270 (404)
T ss_pred EeccCCcc-------------eeeeeccchhhhhhhhhhhhhe-eeeeccCCCeEEEEecc
Confidence 99976532 3355779999999998877777 67899999999999987
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.6e-10 Score=110.59 Aligned_cols=195 Identities=15% Similarity=0.177 Sum_probs=142.2
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC----CeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA----EVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~----~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
+..+....+.- .+..++.+..++.+.+||.. ............. ...-+-++++.-+ +++|+.-+.|.+|+
T Consensus 87 s~wi~g~~l~~-e~k~i~l~~~~ns~~i~d~~---~~~~~~~i~~~er~~l~~~~~~g~s~~~~~-i~~gsv~~~iivW~ 161 (967)
T KOG0974|consen 87 SDWIFGAKLFE-ENKKIALVTSRNSLLIRDSK---NSSVLSKIQSDERCTLYSSLIIGDSAEELY-IASGSVFGEIIVWK 161 (967)
T ss_pred cccccccchhh-hcceEEEEEcCceEEEEecc---cCceehhcCCCceEEEEeEEEEeccCcEEE-EEeccccccEEEEe
Confidence 44444444444 46678888889999999998 3333333322111 1122334566665 89999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
....+.+. .+.+|.+.+..+.++-+|++ +++.|.|.++++|++.+.+... ...-+|...|..+.|
T Consensus 162 ~~~dn~p~-~l~GHeG~iF~i~~s~dg~~-i~s~SdDRsiRlW~i~s~~~~~-------------~~~fgHsaRvw~~~~ 226 (967)
T KOG0974|consen 162 PHEDNKPI-RLKGHEGSIFSIVTSLDGRY-IASVSDDRSIRLWPIDSREVLG-------------CTGFGHSARVWACCF 226 (967)
T ss_pred ccccCCcc-eecccCCceEEEEEccCCcE-EEEEecCcceeeeecccccccC-------------cccccccceeEEEEe
Confidence 98544433 67899999999999999985 9999999999999999865433 235699999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.|. .++|++.|.+.++|+.+.. .+..+..+ ...+...++..++....++++.|+.+++|
T Consensus 227 ~~n---~i~t~gedctcrvW~~~~~-~l~~y~~h--~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~ 285 (967)
T KOG0974|consen 227 LPN---RIITVGEDCTCRVWGVNGT-QLEVYDEH--SGKGIWKIAVPIGVIIKVTGGNDSTLKLW 285 (967)
T ss_pred ccc---eeEEeccceEEEEEecccc-eehhhhhh--hhcceeEEEEcCCceEEEeeccCcchhhh
Confidence 998 5889999999999976543 33444432 23445666888888899999999994433
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-08 Score=98.69 Aligned_cols=222 Identities=11% Similarity=0.061 Sum_probs=126.6
Q ss_pred CceeEEEecCCCCe--E--EEecC--ceEEEEEeeeccccc---cCCCcceEEeeCCCCCEEEEEE-CCC----cEEEEE
Q psy4571 67 PFLYDLVVNNYVAN--I--SCILN--ISILFFEIIFTQNFP---FPLSRQDVAWHLLHESLFGSVA-DDQ----KLMIWD 132 (437)
Q Consensus 67 ~~~~~~~~~~~~~~--i--~~~~~--~~i~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~-~dg----~v~vwd 132 (437)
+....-.|+|++.. + ....+ ..|.+.++..++... ++......+|+|+ ++.|+..+ .+| .+..|+
T Consensus 185 ~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPD-G~~Laf~s~~~g~~di~~~~~~ 263 (428)
T PRK01029 185 SLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPR-KKLLAFISDRYGNPDLFIQSFS 263 (428)
T ss_pred CCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCC-CCEEEEEECCCCCcceeEEEee
Confidence 33455567888764 2 11222 346666665443322 3445567899995 55555443 333 334467
Q ss_pred cCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe--CCCCceeeeEeccCCCceEEEEEcCCCCcEEE
Q psy4571 133 TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQVQWSPHNETILA 210 (437)
Q Consensus 133 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 210 (437)
+..+...........+.+.....+|+|||+.++.+...+|...+|. +.........+..+...+....|+|+|+.+++
T Consensus 264 ~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf 343 (428)
T PRK01029 264 LETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAF 343 (428)
T ss_pred cccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEE
Confidence 6643222333333333334567899999997555555677666664 43212213344445566788999999997554
Q ss_pred EEeCC--CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC--CCeEEEEeCCCCCCc
Q psy4571 211 SSGTD--RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE--DNIMQEYCDSTDSDT 286 (437)
Q Consensus 211 sg~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~ 286 (437)
++..+ ..|.+||+.+++... +......+....|+|||+.+++++.. ...|+++|+.+++..
T Consensus 344 ~~~~~g~~~I~v~dl~~g~~~~---------------Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 344 CSVIKGVRQICVYDLATGRDYQ---------------LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR 408 (428)
T ss_pred EEcCCCCcEEEEEECCCCCeEE---------------ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 54433 369999998764321 12222345678999999966655543 457888899877543
Q ss_pred eeeeeeecccCCceeeeecCCC
Q psy4571 287 KTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~s~~g 308 (437)
.... ........+|+|..
T Consensus 409 ~Lt~----~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 409 KIVI----GSGEKRFPSWGAFP 426 (428)
T ss_pred Eeec----CCCcccCceecCCC
Confidence 3221 12223455777654
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-09 Score=97.32 Aligned_cols=275 Identities=11% Similarity=0.109 Sum_probs=171.8
Q ss_pred eeEEEEeeCCCcceEEEe-----ecc-----CceEeeecCCCceeEEE-----------ecCCCCeEEEecCceEEEEEe
Q psy4571 36 RFYRLCVAEPFDDAVEER-----VIN-----EEYKIWKKNTPFLYDLV-----------VNNYVANISCILNISILFFEI 94 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tg-----s~d-----~~v~iw~~~~~~~~~~~-----------~~~~~~~i~~~~~~~i~~~~~ 94 (437)
.++.+-|+ |-+..+.|- ..+ -.+++|+..++...... |+.+.....-...+.+.+++.
T Consensus 75 ~~~~L~fS-P~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~ 153 (566)
T KOG2315|consen 75 KTYDLLFS-PKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDL 153 (566)
T ss_pred eeeeeeec-ccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEec
Confidence 67788888 877777651 112 24678887764332222 112212223335567888886
Q ss_pred eeccccc---cCCCcceEEeeCCCCC-EEEE-----EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEE
Q psy4571 95 IFTQNFP---FPLSRQDVAWHLLHES-LFGS-----VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 165 (437)
Q Consensus 95 ~~~~~~~---~~~~v~~~~~sp~~~~-~l~~-----~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 165 (437)
...+... +...++.+++||.... .+|+ ++.-+.|+||..........+..-.-....=..+.|++-|.-+|
T Consensus 154 ~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LL 233 (566)
T KOG2315|consen 154 GSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALL 233 (566)
T ss_pred CCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEE
Confidence 5533332 3568899999994233 3332 24456799998863222222211111222334688888877666
Q ss_pred EEEeC--C---------CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE-EeCCCeEEEEEcCCCCCCCCCC
Q psy4571 166 ATGSA--D---------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS-SGTDRRLHVWDLSKIGEEQSTE 233 (437)
Q Consensus 166 ~sgs~--d---------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s-g~~dg~i~vwd~~~~~~~~~~~ 233 (437)
+.++. | .++.+.+++. ..+...+. -.++|.++.|+|+++.+.++ |-.--.+.|||++..
T Consensus 234 vLastdVDktn~SYYGEq~Lyll~t~g-~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~------- 304 (566)
T KOG2315|consen 234 VLASTDVDKTNASYYGEQTLYLLATQG-ESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK------- 304 (566)
T ss_pred EEEEEeecCCCccccccceEEEEEecC-ceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-------
Confidence 55543 3 3577888773 33344443 47999999999999863333 334557999999862
Q ss_pred CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 311 (437)
+++.+ -.++-+++-|+|.|+.++++|= .-|.+-+||+.+.+++..+.. .....+.|+|||+++
T Consensus 305 --------~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a-----~~tt~~eW~PdGe~f 369 (566)
T KOG2315|consen 305 --------PVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA-----ANTTVFEWSPDGEYF 369 (566)
T ss_pred --------EeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc-----CCceEEEEcCCCcEE
Confidence 33323 3456788999999995554442 358999999999888777653 456667999999999
Q ss_pred cccCCCCcccccccccccccccccchhhhh
Q psy4571 312 ASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 312 ~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.+++.....++-. .++||+.. |..
T Consensus 370 lTATTaPRlrvdN-----g~Kiwhyt-G~~ 393 (566)
T KOG2315|consen 370 LTATTAPRLRVDN-----GIKIWHYT-GSL 393 (566)
T ss_pred EEEeccccEEecC-----CeEEEEec-Cce
Confidence 9998776554432 27889884 443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.2e-08 Score=85.21 Aligned_cols=206 Identities=12% Similarity=0.154 Sum_probs=134.6
Q ss_pred cceEEeeCCCCCEEEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCC----------eEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 106 RQDVAWHLLHESLFGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAE----------VNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~----------v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
..-++++++ +.+++++ ...|.|.++-++..+..........|.+. +....+.|++++++++.-.--.|
T Consensus 91 p~yvsvd~~-g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 91 PCYVSVDED-GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred CeEEEECCC-CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 377899994 5555544 55789999999765444444344456655 88999999999744444445579
Q ss_pred EEEeCCCCceeee---EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCcc
Q psy4571 175 ALWDLRNLKLKLH---SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 175 ~lwd~~~~~~~~~---~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.+|++..++.... .+ .-...-..|.|+|+++...+..-.+++|-+|..... .....+......|. .+.+ .
T Consensus 170 ~~y~~~dg~L~~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~----dF~g-~ 243 (346)
T COG2706 170 FLYDLDDGKLTPADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPE----DFTG-T 243 (346)
T ss_pred EEEEcccCcccccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcc----ccCC-C
Confidence 9999996553211 12 233556899999999977777788999999999874 11111110000000 0222 3
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
....+|..+|||+++.++--....|-++.+....- +........+...+....++|.|++|+++..+.
T Consensus 244 ~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s 312 (346)
T COG2706 244 NWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKS 312 (346)
T ss_pred CceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCC
Confidence 46788999999996666665666888888875433 333333333444466678999999998887654
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.4e-08 Score=103.90 Aligned_cols=242 Identities=10% Similarity=0.113 Sum_probs=148.9
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCce------------------------eEEEecCCCCeE-EE-ecCceEEEEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFL------------------------YDLVVNNYVANI-SC-ILNISILFFE 93 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~------------------------~~~~~~~~~~~i-~~-~~~~~i~~~~ 93 (437)
++++..++.++++-+.++.|++++..+..+ ..+++.+....+ .+ ...+.|+.+|
T Consensus 573 vavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id 652 (1057)
T PLN02919 573 LAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREID 652 (1057)
T ss_pred EEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEe
Confidence 667744577888888888899998554322 333333333322 22 2334566666
Q ss_pred eeeccc--c------------------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-------
Q psy4571 94 IIFTQN--F------------------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD------- 146 (437)
Q Consensus 94 ~~~~~~--~------------------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------- 146 (437)
...+.. + ..-....+++|+|.++.++++.+.++.|++||..++. +..+.
T Consensus 653 ~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~----v~~~~G~G~~~~ 728 (1057)
T PLN02919 653 FVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGV----TRVFSGDGYERN 728 (1057)
T ss_pred cCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCe----EEEEecCCcccc
Confidence 432111 0 0012346899999777788888888999999987431 11111
Q ss_pred --c------CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE------------eccC--------CCceEE
Q psy4571 147 --A------HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS------------FESH--------KDEIFQ 198 (437)
Q Consensus 147 --~------h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~------------~~~h--------~~~v~~ 198 (437)
+ .-.....++++|++..++++-+.++.|++||++++...... +... -.....
T Consensus 729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G 808 (1057)
T PLN02919 729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG 808 (1057)
T ss_pred CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence 1 11245679999999876777788899999999875431110 0000 112368
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 199 v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
++++++|. ++++-..++.|++||..++...........+... -....++-.....|+++++|+ ++++-+.++.|++|
T Consensus 809 vavd~dG~-LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~d-G~~~~a~l~~P~GIavd~dG~-lyVaDt~Nn~Irvi 885 (1057)
T PLN02919 809 VLCAKDGQ-IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKD-GKALKAQLSEPAGLALGENGR-LFVADTNNSLIRYL 885 (1057)
T ss_pred eeEeCCCc-EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCC-CcccccccCCceEEEEeCCCC-EEEEECCCCEEEEE
Confidence 89999997 7888888999999999765322110000000000 000112223568899999998 88899999999999
Q ss_pred eCCCCCCcee
Q psy4571 279 CDSTDSDTKT 288 (437)
Q Consensus 279 d~~~~~~~~~ 288 (437)
|+++++..+.
T Consensus 886 d~~~~~~~~~ 895 (1057)
T PLN02919 886 DLNKGEAAEI 895 (1057)
T ss_pred ECCCCcccee
Confidence 9998865433
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.5e-10 Score=98.24 Aligned_cols=167 Identities=14% Similarity=0.110 Sum_probs=117.8
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcE--EEEEeCCCeEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYI--LATGSADKTVALWDLRN 181 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~--l~sgs~dg~i~lwd~~~ 181 (437)
....+..+| ++.++|++..+....++++..... .+.+..... ...-+++.|..+.... .-.++....+.+|....
T Consensus 64 a~~~~~~s~-~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v-~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~ 141 (390)
T KOG3914|consen 64 APALVLTSD-SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCV-PKRPTAISFIREDTSVLVADKAGDVYSFDILSADS 141 (390)
T ss_pred cccccccCC-CceEEEEEeCCCceEEEEEecCCCcceeeeEeec-ccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence 444556666 788999998888887888765432 222322222 2234455555555442 22334455666666664
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
+. ....-+|-.-++.++++||++ +++++..|..|+|-........... .-||+..|..++.-++
T Consensus 142 ~~--~~~~lGhvSml~dVavS~D~~-~IitaDRDEkIRvs~ypa~f~Iesf-------------clGH~eFVS~isl~~~ 205 (390)
T KOG3914|consen 142 GR--CEPILGHVSMLLDVAVSPDDQ-FIITADRDEKIRVSRYPATFVIESF-------------CLGHKEFVSTISLTDN 205 (390)
T ss_pred cC--cchhhhhhhhhheeeecCCCC-EEEEecCCceEEEEecCcccchhhh-------------ccccHhheeeeeeccC
Confidence 22 445568999999999999998 5899999999999888765544431 4589999999999877
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.. |+++|.|+++++||+.+|+++.++..
T Consensus 206 ~~--LlS~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 206 YL--LLSGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred ce--eeecCCCCcEEEEecccCCcccccch
Confidence 64 77999999999999999998876653
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-08 Score=99.28 Aligned_cols=213 Identities=14% Similarity=0.082 Sum_probs=122.8
Q ss_pred ceeEEEecCCCCeEEEec--C--ceEEEEEeeeccccc---cCCCcceEEeeCCCCCEEEEEECCCc--EEEEEcCCCCC
Q psy4571 68 FLYDLVVNNYVANISCIL--N--ISILFFEIIFTQNFP---FPLSRQDVAWHLLHESLFGSVADDQK--LMIWDTRSHNV 138 (437)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~--~--~~i~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~--v~vwd~~~~~~ 138 (437)
.+....|++++..+.... + ..|.++|+..++... .+......+|+|++..++++.+.+|. |.++|+.++
T Consensus 219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg-- 296 (448)
T PRK04792 219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK-- 296 (448)
T ss_pred cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC--
Confidence 345667888888775542 2 257777876544221 23345678999954445555677775 666777632
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
....+..+.......+|+|||+++++++..++. |.++|+.+++. ..+..........+|+|+|++++++...++
T Consensus 297 --~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~--~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g 372 (448)
T PRK04792 297 --ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV--SRLTFEGEQNLGGSITPDGRSMIMVNRTNG 372 (448)
T ss_pred --CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE--EEEecCCCCCcCeeECCCCCEEEEEEecCC
Confidence 233444455566788999999985566555555 55567766543 222212223345789999997656555555
Q ss_pred e--EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe--EEEEeCCCCCCceeeeee
Q psy4571 217 R--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI--MQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 217 ~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~ 292 (437)
. |.++|+.++.... +.... ......|+|+|+.++++...++. +++++.. +.....+..
T Consensus 373 ~~~I~~~dl~~g~~~~---------------lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~~~~l~~- 434 (448)
T PRK04792 373 KFNIARQDLETGAMQV---------------LTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRFKARLPA- 434 (448)
T ss_pred ceEEEEEECCCCCeEE---------------ccCCC-CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcC-
Confidence 4 5556766643211 11111 11234799999976666655554 6677764 444444432
Q ss_pred ecccCCceeeeecC
Q psy4571 293 SIRSNGGISSTASP 306 (437)
Q Consensus 293 ~~~~~~~~~~~~s~ 306 (437)
........+|+|
T Consensus 435 --~~g~~~~p~Wsp 446 (448)
T PRK04792 435 --GQGEVKSPAWSP 446 (448)
T ss_pred --CCCCcCCCccCC
Confidence 122233446665
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1e-10 Score=121.18 Aligned_cols=195 Identities=13% Similarity=0.202 Sum_probs=152.5
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..|.++.=+| ...+.++|+.||.|++|.-.. ...+..+. +....|+.+.|+.+|.. +..+..||.+.+|...
T Consensus 2209 ~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~---~~~v~~~rt~g~s~vtr~~f~~qGnk-~~i~d~dg~l~l~q~~-- 2281 (2439)
T KOG1064|consen 2209 ENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGH---GQQVVCFRTAGNSRVTRSRFNHQGNK-FGIVDGDGDLSLWQAS-- 2281 (2439)
T ss_pred CceeeecCCC-CCceEEecCCCceEEEEeccC---CCeEEEeeccCcchhhhhhhcccCCc-eeeeccCCceeecccC--
Confidence 3567777788 456777999999999999874 34443332 23378999999999996 9999999999999998
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
..+....+.|......++|-. . ++++++ .++.+.+||.-..... .++ ...|.+.++++++.
T Consensus 2282 pk~~~s~qchnk~~~Df~Fi~--s-~~~tag~s~d~~n~~lwDtl~~~~~-----------s~v--~~~H~~gaT~l~~~ 2345 (2439)
T KOG1064|consen 2282 PKPYTSWQCHNKALSDFRFIG--S-LLATAGRSSDNRNVCLWDTLLPPMN-----------SLV--HTCHDGGATVLAYA 2345 (2439)
T ss_pred CcceeccccCCccccceeeee--h-hhhccccCCCCCcccchhcccCccc-----------cee--eeecCCCceEEEEc
Confidence 444778889999999999976 3 466664 4678999997553211 222 37899999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
|..+ ++++||.+|.|++||++..+....++. +. .-.++.+|+..|. ++||++...
T Consensus 2346 P~~q-llisggr~G~v~l~D~rqrql~h~~~~------------~~-~~~~f~~~ss~g~-----------ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2346 PKHQ-LLISGGRKGEVCLFDIRQRQLRHTFQA------------LD-TREYFVTGSSEGN-----------IKIWRLSEF 2400 (2439)
T ss_pred Ccce-EEEecCCcCcEEEeehHHHHHHHHhhh------------hh-hhheeeccCcccc-----------eEEEEcccc
Confidence 9999 899999999999999998777666642 23 4568889999998 899999887
Q ss_pred hhhhhhc
Q psy4571 340 EEQRQLL 346 (437)
Q Consensus 340 ~~~~~~~ 346 (437)
..++++.
T Consensus 2401 ~ll~~~p 2407 (2439)
T KOG1064|consen 2401 GLLHTFP 2407 (2439)
T ss_pred chhhcCc
Confidence 7777663
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-08 Score=83.67 Aligned_cols=160 Identities=8% Similarity=0.045 Sum_probs=115.4
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE--eccCCCc
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS--FESHKDE 195 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~--~~~h~~~ 195 (437)
-+..++.|.++++.+++.+.....+.. ..-.+.+++++++++. +++.+....|..|.+......+.. .....+.
T Consensus 130 ~~~i~sndht~k~~~~~~~s~~~~~h~---~~~~~ns~~~snd~~~-~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~ 205 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSNKFAVHN---QNLTQNSLHYSNDPSW-GSSVGDSRRVFRYAIDDESEYIENIYEAPTSDH 205 (344)
T ss_pred ceeeccCCcceeEEEEecCcccceeec---cccceeeeEEcCCCce-EEEecCCCcceEEEeCCccceeeeeEecccCCC
Confidence 455678899999998874322222211 1123889999999995 888899999999999875543332 2234455
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCe
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNI 274 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~ 274 (437)
-.+..|+.... .+|++..||++.|||++....+... .-.....|++.++.+.|+|-|. .+|.-.-.-+.
T Consensus 206 gF~~S~s~~~~-~FAv~~Qdg~~~I~DVR~~~tpm~~---------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~ 275 (344)
T KOG4532|consen 206 GFYNSFSENDL-QFAVVFQDGTCAIYDVRNMATPMAE---------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSR 275 (344)
T ss_pred ceeeeeccCcc-eEEEEecCCcEEEEEecccccchhh---------hcccCCCCCCceEEEEecCCCcceEEEEecCcce
Confidence 67889998887 6999999999999999987654331 1122346899999999998775 35555556678
Q ss_pred EEEEeCCCCCCceeeee
Q psy4571 275 MQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~ 291 (437)
+.+-|+++++..+.+..
T Consensus 276 ~hv~D~R~~~~~q~I~i 292 (344)
T KOG4532|consen 276 VHVVDTRNYVNHQVIVI 292 (344)
T ss_pred EEEEEcccCceeeEEec
Confidence 99999999987776654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-09 Score=95.04 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=138.5
Q ss_pred eEEEEeeC-CCcceEEEeeccCceEeeecCCCcee----EEEecCCCCeEEEecCceEEEEE----eeecc--ccccCCC
Q psy4571 37 FYRLCVAE-PFDDAVEERVINEEYKIWKKNTPFLY----DLVVNNYVANISCILNISILFFE----IIFTQ--NFPFPLS 105 (437)
Q Consensus 37 v~~~~~~~-~~~~~l~tgs~d~~v~iw~~~~~~~~----~~~~~~~~~~i~~~~~~~i~~~~----~~~~~--~~~~~~~ 105 (437)
|..+.+.. .+...++....|+++|+|+....... .+........++...--.+.-.+ ....+ ...|+.-
T Consensus 87 inkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyh 166 (433)
T KOG1354|consen 87 INKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYH 166 (433)
T ss_pred hhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeE
Confidence 44455442 23456777788999999995432111 11111111111111100000011 11111 2246678
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-----CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-----AEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
++++.++. +...++++ .|=.|.+|+++-.+..-.+--.+.+. .-|++..|+|....+++-++..|+|+|.|++
T Consensus 167 iNSIS~Ns-D~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR 244 (433)
T KOG1354|consen 167 INSISVNS-DKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMR 244 (433)
T ss_pred eeeeeecC-ccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeech
Confidence 89999998 45556554 57889999998544333333344443 3588999999988889999999999999999
Q ss_pred CCceeeeE---e------------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 181 NLKLKLHS---F------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 181 ~~~~~~~~---~------------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
....+... + ..--..|..+.|++.|++ +++-+ =-+|++||+.....+......+......+..
T Consensus 245 ~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGry-ilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~ 322 (433)
T KOG1354|consen 245 QSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRY-ILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCS 322 (433)
T ss_pred hhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcE-EEEec-cceeEEEeccccCCcceEEeehHhHHHHHHH
Confidence 53322110 1 111245789999999996 54543 2689999996654322211000000000000
Q ss_pred ecCcccc---EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 246 HGGHTAK---ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 246 ~~~h~~~---v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+-. .+. -..++|+.++. .++||+..+.++++++..|.
T Consensus 323 lYE-nD~IfdKFec~~sg~~~-~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 323 LYE-NDAIFDKFECSWSGNDS-YVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred Hhh-ccchhheeEEEEcCCcc-eEecccccceEEEecCCCCc
Confidence 000 111 24578998888 68899999999999976653
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.9e-09 Score=98.12 Aligned_cols=180 Identities=13% Similarity=0.162 Sum_probs=129.2
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe------C-------------CCCcEEEEEeCCCeEE
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN------P-------------YSEYILATGSADKTVA 175 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~------~-------------~~~~~l~sgs~dg~i~ 175 (437)
...+||....||.+++||...++......-...-++...+..|. | .+..+++-|...|.|.
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~ 83 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL 83 (541)
T ss_pred hhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence 56789999999999999998543222221111223444555553 2 1233688899999999
Q ss_pred EEeCCCCceeeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 176 LWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 176 lwd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+++...++...... ..|.++|.++.++.+-. .|.+++.|+.+..|+..... .++.....+..+.
T Consensus 84 ~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~--------------~~~~~~~~~~~~~ 148 (541)
T KOG4547|consen 84 LYSVAGGEITAKLSTDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKV--------------IIRIWKEQKPLVS 148 (541)
T ss_pred EEEecCCeEEEEEecCCCCCcceeeecccccC-ceEecCCceeEEEEecccce--------------eeeeeccCCCccc
Confidence 99999877532222 47999999999988776 69999999999999998753 3455777788899
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCC-----CCcccccC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPT-----ASSTASES 315 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~-----g~~l~s~s 315 (437)
+++.+|||. ++++++ +.|++||+++++.+..+.. |...+...+|.-+ |.++.++.
T Consensus 149 sl~is~D~~-~l~~as--~~ik~~~~~~kevv~~ftg---h~s~v~t~~f~~~~~g~~G~~vLssa 208 (541)
T KOG4547|consen 149 SLCISPDGK-ILLTAS--RQIKVLDIETKEVVITFTG---HGSPVRTLSFTTLIDGIIGKYVLSSA 208 (541)
T ss_pred eEEEcCCCC-EEEecc--ceEEEEEccCceEEEEecC---CCcceEEEEEEEeccccccceeeecc
Confidence 999999998 777765 6799999999988888875 3344444566554 55555443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.3e-08 Score=103.97 Aligned_cols=218 Identities=11% Similarity=0.092 Sum_probs=135.6
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-----------------CCCeEEEEEeCCCCcEEEE
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-----------------TAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-----------------~~~v~~l~~~~~~~~~l~s 167 (437)
....++++++++.++++-...+.|+++|+.++ .+.++.+- -.....++++|++..++++
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~----~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVa 700 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNE----TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIA 700 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCC----EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEE
Confidence 35789999843334444445678999998632 22222110 1234689999966657788
Q ss_pred EeCCCeEEEEeCCCCceeeeEecc---------------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 168 GSADKTVALWDLRNLKLKLHSFES---------------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 168 gs~dg~i~lwd~~~~~~~~~~~~~---------------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.+.++.|++||..++.. ..+.+ .-.....++++|++++++++.+.++.|++||+.++......
T Consensus 701 d~~~~~I~v~d~~~g~v--~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 701 MAGQHQIWEYNISDGVT--RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred ECCCCeEEEEECCCCeE--EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence 88899999999987542 22211 01234679999999877778788899999999865421000
Q ss_pred CCCCCCCCceEEEec--------CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee----------c
Q psy4571 233 EDAEDGPPELLFIHG--------GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS----------I 294 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~--------~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~ 294 (437)
.... .....+..+. ..-....+++++++|. ++++-..++.|++||..++.......... .
T Consensus 779 gg~~-~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a 856 (1057)
T PLN02919 779 GGDP-TFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKA 856 (1057)
T ss_pred eccc-ccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccccc
Confidence 0000 0000000010 0111346889999998 88888999999999998765432221100 0
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.-..+..++++++|+++++.+.++. |++||+.+++.
T Consensus 857 ~l~~P~GIavd~dG~lyVaDt~Nn~-----------Irvid~~~~~~ 892 (1057)
T PLN02919 857 QLSEPAGLALGENGRLFVADTNNSL-----------IRYLDLNKGEA 892 (1057)
T ss_pred ccCCceEEEEeCCCCEEEEECCCCE-----------EEEEECCCCcc
Confidence 1123556788999998888887777 78888877654
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=104.14 Aligned_cols=179 Identities=17% Similarity=0.307 Sum_probs=139.3
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.+..+++++-|+|++...+++++.|-.+..||+++. ..++.....-......++|+-.... +.+.+....|++||++
T Consensus 112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp--~~p~ys~~~w~s~asqVkwnyk~p~-vlasshg~~i~vwd~r 188 (1081)
T KOG0309|consen 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP--HRPFYSTSSWRSAASQVKWNYKDPN-VLASSHGNDIFVWDLR 188 (1081)
T ss_pred cCccceeccccCCCCCcceeeccccccceeeeccCC--CcceeeeecccccCceeeecccCcc-hhhhccCCceEEEecc
Confidence 356789999999999999999999999999999964 3455555555556788999987776 5566777889999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC--------------------------
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED-------------------------- 234 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------------------------- 234 (437)
.+..++..+++|...|+.++|+.-....+.+++.|++|+.||............
T Consensus 189 ~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~ 268 (1081)
T KOG0309|consen 189 KGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGG 268 (1081)
T ss_pred CCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCC
Confidence 999989999999999999999865444578999999999999876543221110
Q ss_pred ---------------CCCCCCceEEEecCccccEEEEEEccCC---------CeEEEEEeCCCeEEEEeCCC
Q psy4571 235 ---------------AEDGPPELLFIHGGHTAKISDFSWNPNE---------PWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 235 ---------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~---------~~~l~s~~~dg~i~iwd~~~ 282 (437)
..-....+++.+.||.+.|....|-..+ .+.|+|-+.|..+++|-+.+
T Consensus 269 n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 269 NMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred eeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 0111346788899999988877775322 36789999999999998764
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-07 Score=82.13 Aligned_cols=218 Identities=9% Similarity=0.066 Sum_probs=137.3
Q ss_pred CceEEEEEeee-------ccccccCCCcceEEeeCCCCCEEEEEEC---CCcEEEEEcCCC-CCCCCeeeeccCCCCeEE
Q psy4571 86 NISILFFEIIF-------TQNFPFPLSRQDVAWHLLHESLFGSVAD---DQKLMIWDTRSH-NVSKPSHTVDAHTAEVNC 154 (437)
Q Consensus 86 ~~~i~~~~~~~-------~~~~~~~~~v~~~~~sp~~~~~l~~~~~---dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~ 154 (437)
+..|.+|++.. .+.......++-++|+| +.+.|.++-. +|.|..|.++.. +....+........+.+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~-~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNP-DQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCY 93 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECC-CCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeE
Confidence 34566665441 12233456788999999 5656666544 577888887742 122223222223344588
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEeccCCCc----------eEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSFESHKDE----------IFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~~~h~~~----------v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
+++++++++++.+....|.|.++-++..... ......|.+. +....+.|++++++++.=.-.+|.+|+
T Consensus 94 vsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~ 173 (346)
T COG2706 94 VSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD 173 (346)
T ss_pred EEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence 9999999986666667899999999764321 1122335554 889999999996444433345799999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-CCceeee------eeecc
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMR------LDSIR 295 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~------~~~~~ 295 (437)
+..+...... ... + ......+.|.|+|+++...+.+-.+++|.+|..+.. .....++ .....
T Consensus 174 ~~dg~L~~~~---------~~~-v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g 242 (346)
T COG2706 174 LDDGKLTPAD---------PAE-V-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTG 242 (346)
T ss_pred cccCcccccc---------ccc-c-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCC
Confidence 9966543331 111 1 223456889999999966667778999999999874 2222222 11122
Q ss_pred cCCceeeeecCCCCcccccC
Q psy4571 296 SNGGISSTASPTASSTASES 315 (437)
Q Consensus 296 ~~~~~~~~~s~~g~~l~s~s 315 (437)
..+...+..+|||++|.+..
T Consensus 243 ~~~~aaIhis~dGrFLYasN 262 (346)
T COG2706 243 TNWAAAIHISPDGRFLYASN 262 (346)
T ss_pred CCceeEEEECCCCCEEEEec
Confidence 33445557899999998764
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-08 Score=87.43 Aligned_cols=273 Identities=14% Similarity=0.193 Sum_probs=168.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCC--CceeEE--EecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT--PFLYDL--VVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~--~~~~~~--~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
...+.++.|. ..|.+++||...|.|-++..+. ++-+.. .|..+..... ..+.......|+.+
T Consensus 26 ad~ItaVefd-~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFD-------------YLkSleieEKin~I 91 (460)
T COG5170 26 ADKITAVEFD-ETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFD-------------YLKSLEIEEKINAI 91 (460)
T ss_pred cceeeEEEec-cccceEeecCCCceEEEeecccccccchhhhhhhcccccchh-------------hhhhccHHHHhhhe
Confidence 4567889999 8899999998889888887432 222211 1111111110 11222344578888
Q ss_pred EeeCC-CCCEEEEEECCCcEEEEEcCCCC----------------CC-----------------------CCeeee-ccC
Q psy4571 110 AWHLL-HESLFGSVADDQKLMIWDTRSHN----------------VS-----------------------KPSHTV-DAH 148 (437)
Q Consensus 110 ~~sp~-~~~~l~~~~~dg~v~vwd~~~~~----------------~~-----------------------~~~~~~-~~h 148 (437)
.|... +...|+..+.|.+|++|.+.... .+ .+.+.. ..|
T Consensus 92 ~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH 171 (460)
T COG5170 92 EWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAH 171 (460)
T ss_pred eeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccc
Confidence 88653 44577788889999999875320 00 011111 457
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEeccCC-----CceEEEEEcCCCCcEEEEEeCCCeEEEE
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSFESHK-----DEIFQVQWSPHNETILASSGTDRRLHVW 221 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~~~h~-----~~v~~v~~~p~~~~~l~sg~~dg~i~vw 221 (437)
.-.++++.|+.|.+. +++ +.|-.|.+|++.-.... +..++.|. .-|++..|+|....++.-.+..|.|++-
T Consensus 172 ~yhiNSiS~NsD~et-~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~ 249 (460)
T COG5170 172 PYHINSISFNSDKET-LLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLN 249 (460)
T ss_pred eeEeeeeeecCchhe-eee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEeh
Confidence 777899999998884 555 46788999998754332 33444453 3588999999877777777889999999
Q ss_pred EcCCCCCCCCCCC--CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-CCceeeeeee-----
Q psy4571 222 DLSKIGEEQSTED--AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMRLDS----- 293 (437)
Q Consensus 222 d~~~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~----- 293 (437)
|++.......... .....+...--+.+-...|..+.|++.|+ ++++-+ =-++++||++.. .++++++++.
T Consensus 250 DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr-yIlsRd-yltvkiwDvnm~k~pikTi~~h~~l~~~ 327 (460)
T COG5170 250 DLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR-YILSRD-YLTVKIWDVNMAKNPIKTIPMHCDLMDE 327 (460)
T ss_pred hhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc-EEEEec-cceEEEEecccccCCceeechHHHHHHH
Confidence 9996442211000 00000011111233445789999999999 554543 358999999865 4566664321
Q ss_pred ---cccCC----ceeeeecCCCCcccccCCCCcccccc
Q psy4571 294 ---IRSNG----GISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 294 ---~~~~~----~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
..... -..+.||.|.+.+.+|+......++.
T Consensus 328 l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 328 LNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYP 365 (460)
T ss_pred HHhhhhccceeeeEEEEecCCcccccccccccceeeec
Confidence 11112 23357889999999999887755443
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-07 Score=88.72 Aligned_cols=278 Identities=12% Similarity=0.115 Sum_probs=167.6
Q ss_pred EecCCCCeEEEecCceEEEEEeeeccc-c-ccCCCcceEEeeCCCCCEEEEE-----ECC-----CcEEEEEcCCCCCCC
Q psy4571 73 VVNNYVANISCILNISILFFEIIFTQN-F-PFPLSRQDVAWHLLHESLFGSV-----ADD-----QKLMIWDTRSHNVSK 140 (437)
Q Consensus 73 ~~~~~~~~i~~~~~~~i~~~~~~~~~~-~-~~~~~v~~~~~sp~~~~~l~~~-----~~d-----g~v~vwd~~~~~~~~ 140 (437)
++++.+...++..+..++|++...... . .....+.++.|+| -+.+|.+- ..+ -.+.+|++++. .
T Consensus 41 ~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~~~~~~~L~fSP-~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~---~ 116 (566)
T KOG2315|consen 41 AYSNNGRLFAYSDNQVVKVFEIATLKVVLCVELKKTYDLLFSP-KGNYLLTWEPWAIYGPKNASNPNVLVYNVETG---V 116 (566)
T ss_pred EEcCCCcEEEEEcCCeEEEEEccCCcEEEEeccceeeeeeecc-cccccccccccccccCCCCCCCceeeeeeccc---e
Confidence 334444444555555555555433311 0 1123677889999 45666532 112 34779999852 2
Q ss_pred Ceeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCC-CcEEEE-----Ee
Q psy4571 141 PSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-ETILAS-----SG 213 (437)
Q Consensus 141 ~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s-----g~ 213 (437)
....+. ..... ++..|++|.. ++.=-..+.+.+|+....+.....+ |...|+.+.++|.+ ...+|+ +|
T Consensus 117 ~~s~~q~k~Q~~-W~~qfs~dEs--l~arlv~nev~f~~~~~f~~~~~kl--~~~~i~~f~lSpgp~~~~vAvyvPe~kG 191 (566)
T KOG2315|consen 117 QRSQIQKKMQNG-WVPQFSIDES--LAARLVSNEVQFYDLGSFKTIQHKL--SVSGITMLSLSPGPEPPFVAVYVPEKKG 191 (566)
T ss_pred ehhheehhhhcC-cccccccchh--hhhhhhcceEEEEecCCccceeeee--eccceeeEEecCCCCCceEEEEccCCCC
Confidence 222222 12222 6889998876 5555556789999998865544343 57788999999873 333433 34
Q ss_pred CCCeEEEEEcCCCCCCCCCCC--------------------------------CCCCCCceEEE--ec--------Cccc
Q psy4571 214 TDRRLHVWDLSKIGEEQSTED--------------------------------AEDGPPELLFI--HG--------GHTA 251 (437)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~~~~--------------------------------~~~~~~~~~~~--~~--------~h~~ 251 (437)
.-..|+||.......-+.+.. ........++. .. ...+
T Consensus 192 aPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~G 271 (566)
T KOG2315|consen 192 APASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEG 271 (566)
T ss_pred CCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCC
Confidence 455799998873222111110 00000011111 11 1257
Q ss_pred cEEEEEEccCCCeE-EEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 252 KISDFSWNPNEPWV-ICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 252 ~v~~l~~~p~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
+|.++.|+|++..+ ++-|-.-.++.|+|++.. .+..+ .......+-|+|.|++++.++-+.. -..
T Consensus 272 PVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-~v~df-----~egpRN~~~fnp~g~ii~lAGFGNL--------~G~ 337 (566)
T KOG2315|consen 272 PVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-PVFDF-----PEGPRNTAFFNPHGNIILLAGFGNL--------PGD 337 (566)
T ss_pred CceEEEECCCCCEEEEEEecccceEEEEcCCCC-EeEeC-----CCCCccceEECCCCCEEEEeecCCC--------CCc
Confidence 89999999999733 344557788999998843 33222 3344556789999999998876541 223
Q ss_pred cccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------------ccccCHHH
Q psy4571 331 LVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------------IWSMTDEQ 375 (437)
Q Consensus 331 i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------------~w~~~~~~ 375 (437)
+.+||+.+-+++..+.... .+...|+|||..+++. ||+.++..
T Consensus 338 mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 338 MEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred eEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence 8999999988887776643 5667799999988775 89987754
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-08 Score=95.97 Aligned_cols=309 Identities=11% Similarity=0.076 Sum_probs=186.9
Q ss_pred eEEecCCcccc-cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecccc-
Q psy4571 23 FTWSALPLSHS-IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 23 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~- 100 (437)
|+|..+.+... .....|+.|+ .+..+|+.|+.||.+|+.+..+...-.- ..+ +++.. .+...+.+
T Consensus 2 fvylskki~iPnnvkL~c~~WN-ke~gyIAcgG~dGlLKVlKl~t~t~d~~-~~g----laa~s-------nLsmNQtLe 68 (1189)
T KOG2041|consen 2 FVYLSKKIGIPNNVKLHCAEWN-KESGYIACGGADGLLKVLKLGTDTTDLN-KSG----LAAAS-------NLSMNQTLE 68 (1189)
T ss_pred ceEeecccCCCCCceEEEEEEc-ccCCeEEeccccceeEEEEccccCCccc-ccc----ccccc-------ccchhhhhc
Confidence 56777777744 5566778899 8899999999999999998654322110 001 11000 01112222
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.|+.+|..+.|+. +...|-+...+|.|.||-+-.+.-.+.. .-...++-|.+++|+.+|.. ++...+||.|.+=.++
T Consensus 69 GH~~sV~vvTWNe-~~QKLTtSDt~GlIiVWmlykgsW~EEM-iNnRnKSvV~SmsWn~dG~k-IcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 69 GHNASVMVVTWNE-NNQKLTTSDTSGLIIVWMLYKGSWCEEM-INNRNKSVVVSMSWNLDGTK-ICIVYEDGAVIVGSVD 145 (1189)
T ss_pred cCcceEEEEEecc-ccccccccCCCceEEEEeeecccHHHHH-hhCcCccEEEEEEEcCCCcE-EEEEEccCCEEEEeec
Confidence 3677899999998 5678888899999999998754321111 11234567999999999997 9999999999988887
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc-
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN- 259 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~- 259 (437)
.++.--..+++ .....+.|++|.+. +..+-.+|.+++||........-... -.....-.++-.+| .+-.+.|.
T Consensus 146 GNRIwgKeLkg--~~l~hv~ws~D~~~-~Lf~~ange~hlydnqgnF~~Kl~~~-c~Vn~tg~~s~~~~--kia~i~w~~ 219 (1189)
T KOG2041|consen 146 GNRIWGKELKG--QLLAHVLWSEDLEQ-ALFKKANGETHLYDNQGNFERKLEKD-CEVNGTGIFSNFPT--KIAEIEWNT 219 (1189)
T ss_pred cceecchhcch--heccceeecccHHH-HHhhhcCCcEEEecccccHHHhhhhc-eEEeeeeeecCCCc--cccceeecc
Confidence 64421122322 22357899999884 66677789999999876432211000 00000001111112 24555553
Q ss_pred -------cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 260 -------PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 260 -------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
|+.+ .++.+-.+|.+.+-.-++......+.. ....+.+.|+++|..|+.++.+....-- .. ...+.
T Consensus 220 g~~~~v~pdrP-~lavcy~nGr~QiMR~eND~~Pvv~dt----gm~~vgakWnh~G~vLAvcG~~~da~~~-~d-~n~v~ 292 (1189)
T KOG2041|consen 220 GPYQPVPPDRP-RLAVCYANGRMQIMRSENDPEPVVVDT----GMKIVGAKWNHNGAVLAVCGNDSDADEP-TD-SNKVH 292 (1189)
T ss_pred CccccCCCCCC-EEEEEEcCceehhhhhcCCCCCeEEec----ccEeecceecCCCcEEEEccCcccccCc-cc-cceEE
Confidence 5777 788899999888765554433323322 1345556899999999999876543211 11 01122
Q ss_pred cccchhhhhhhhhcCCCccccccCCCCCC
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSDND 361 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~~~ 361 (437)
++ ...|+.+.+++-....++.+.+-..|
T Consensus 293 Fy-sp~G~i~gtlkvpg~~It~lsWEg~g 320 (1189)
T KOG2041|consen 293 FY-SPYGHIVGTLKVPGSCITGLSWEGTG 320 (1189)
T ss_pred Ee-ccchhheEEEecCCceeeeeEEcCCc
Confidence 22 24566666665555556655544443
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-09 Score=100.03 Aligned_cols=183 Identities=15% Similarity=0.182 Sum_probs=126.0
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCC
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK------LKLHSFESHKDEIFQVQWSPHNETILASSGTD 215 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d 215 (437)
+..+.+|+..|..++--.+... +++++.|++|++|.++... .+..++..|+.+|.++.|-.+.++ +++ .|
T Consensus 728 L~nf~GH~~~iRai~AidNENS-FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~-i~S--cD 803 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENS-FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRS-IAS--CD 803 (1034)
T ss_pred eecccCcHHHhHHHHhcccccc-eeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccce-eee--cc
Confidence 4567789998888876555554 9999999999999987522 246678899999999999998875 544 48
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee--
Q psy4571 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-- 293 (437)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-- 293 (437)
|-|++||.-.+........ ...++..+.|.++. +-+..-+++.++...+|+++|.+.++-...++...
T Consensus 804 ~giHlWDPFigr~Laq~~d---------apk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~ 873 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMED---------APKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP 873 (1034)
T ss_pred CcceeecccccchhHhhhc---------CcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCC
Confidence 9999999876654433211 00112223344432 22344234444789999999999988777776542
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
........++..|.|+.++.+=..|. |.+.|.++|+.+......+
T Consensus 874 ~Pna~~R~iaVa~~GN~lAa~LSnGc-----------i~~LDaR~G~vINswrpme 918 (1034)
T KOG4190|consen 874 GPNALTRAIAVADKGNKLAAALSNGC-----------IAILDARNGKVINSWRPME 918 (1034)
T ss_pred CCchheeEEEeccCcchhhHHhcCCc-----------EEEEecCCCceeccCCccc
Confidence 22233445588999999999998988 6777777777666554433
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.2e-07 Score=84.16 Aligned_cols=280 Identities=13% Similarity=0.183 Sum_probs=172.5
Q ss_pred cccceeEEEEeeCCCcceEEEeecc-----------CceEeeecCCCcee--------------EEEecCCCCeEEEecC
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVIN-----------EEYKIWKKNTPFLY--------------DLVVNNYVANISCILN 86 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d-----------~~v~iw~~~~~~~~--------------~~~~~~~~~~i~~~~~ 86 (437)
+...+|..+.|+ |.+++|+|-|.. ..++|||..+|.+. -..|+.+..++++...
T Consensus 247 F~Hp~Vq~idfS-P~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~ 325 (698)
T KOG2314|consen 247 FYHPGVQFIDFS-PNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG 325 (698)
T ss_pred ccCCCceeeecC-CccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc
Confidence 345678889999 999999997643 36899997665422 2346777788888888
Q ss_pred ceEEEEEeeec----cccccCCCcceEEeeCCCCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 87 ISILFFEIIFT----QNFPFPLSRQDVAWHLLHESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 87 ~~i~~~~~~~~----~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
.+|.+++...- .+---..+|....|+| .+++||--... ..+.+-.+. ..+.+++-.-|.-.=..+.|
T Consensus 326 ~sisIyEtpsf~lld~Kslki~gIr~FswsP-~~~llAYwtpe~~~~parvtL~evP---s~~~iRt~nlfnVsDckLhW 401 (698)
T KOG2314|consen 326 NSISIYETPSFMLLDKKSLKISGIRDFSWSP-TSNLLAYWTPETNNIPARVTLMEVP---SKREIRTKNLFNVSDCKLHW 401 (698)
T ss_pred ceEEEEecCceeeecccccCCccccCcccCC-CcceEEEEcccccCCcceEEEEecC---ccceeeeccceeeeccEEEe
Confidence 89999985431 1112346889999999 56666532211 123334433 22333333223222234566
Q ss_pred eCCCCcEEEE----------EeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC--CCeEEEEEcCC
Q psy4571 158 NPYSEYILAT----------GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT--DRRLHVWDLSK 225 (437)
Q Consensus 158 ~~~~~~~l~s----------gs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~--dg~i~vwd~~~ 225 (437)
-.+|.+ |+. .+.-..+.|+.++....++... .....|...+|-|.|..+.+..+. ..++.+|.+.+
T Consensus 402 Qk~gdy-LcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~ 479 (698)
T KOG2314|consen 402 QKSGDY-LCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVET 479 (698)
T ss_pred ccCCcE-EEEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeec
Confidence 677776 443 2223357778887755555444 356889999999999863333333 34588888875
Q ss_pred CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE--eCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV--SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
... .++++..+.. ...+.+.|+|.|+++++.+ |..|.+.++|..-...... ....+.....+.
T Consensus 480 ~~~----------~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~---~~~eh~~at~ve 544 (698)
T KOG2314|consen 480 NIK----------KPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDT---ASPEHFAATEVE 544 (698)
T ss_pred CCC----------chhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhc---cCccccccccce
Confidence 221 1223333333 4578899999999555443 5689999999985322221 112345566679
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
|.|.|+++++++.....++- ...++|+..-
T Consensus 545 WDPtGRYvvT~ss~wrhk~d-----~GYri~tfqG 574 (698)
T KOG2314|consen 545 WDPTGRYVVTSSSSWRHKVD-----NGYRIFTFQG 574 (698)
T ss_pred ECCCCCEEEEeeehhhhccc-----cceEEEEeec
Confidence 99999999999866543322 2257777743
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.3e-09 Score=87.83 Aligned_cols=149 Identities=16% Similarity=0.222 Sum_probs=99.8
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEe-----CCCeEEEEeCCCCceeeeEe
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGS-----ADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs-----~dg~i~lwd~~~~~~~~~~~ 189 (437)
++-++++..||.+.+.+.+.. .+..+... .|.+ -.+.+....+.. +.++. .-+..+.|+++..+..+...
T Consensus 101 ~t~V~~~~~dg~~~v~s~~~~--~~~~~~i~~~~~~-~as~~~~~~~~~-i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~ 176 (319)
T KOG4714|consen 101 DNRVCIGYADGSLAVFSTDKD--LALMSRIPSIHSG-SASRKICRHGNS-ILSGGCGNWNAQDNFYANTLDPIKTLIPSK 176 (319)
T ss_pred CCceEecCCCceEEEEechHH--Hhhhhhccccccc-ccccceeecccE-EecCCcceEeeccceeeecccccccccccc
Confidence 456889999999999998731 11111111 1211 122333334442 33322 12345567766533322222
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
+. ...|++++-+|..++++++|+.||.+-+||.+....+. ..+..|+.+++.+.|+|..+.-|.++
T Consensus 177 ~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~-------------S~l~ahk~~i~eV~FHpk~p~~Lft~ 242 (319)
T KOG4714|consen 177 KA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPV-------------SLLKAHKAEIWEVHFHPKNPEHLFTC 242 (319)
T ss_pred cc-cccchhhhCCcccccEEEEecCCCeEEEEEcccccchH-------------HHHHHhhhhhhheeccCCCchheeEe
Confidence 22 24499999999988899999999999999999874333 33779999999999999877678899
Q ss_pred eCCCeEEEEeCCC
Q psy4571 270 SEDNIMQEYCDST 282 (437)
Q Consensus 270 ~~dg~i~iwd~~~ 282 (437)
+.||.+-.||..+
T Consensus 243 sedGslw~wdas~ 255 (319)
T KOG4714|consen 243 SEDGSLWHWDAST 255 (319)
T ss_pred cCCCcEEEEcCCC
Confidence 9999999999884
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=8e-07 Score=82.17 Aligned_cols=274 Identities=12% Similarity=0.125 Sum_probs=167.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccC---------------ceEeeecCCCceeEEEe--------------cCCCCeEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINE---------------EYKIWKKNTPFLYDLVV--------------NNYVANIS 82 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~---------------~v~iw~~~~~~~~~~~~--------------~~~~~~i~ 82 (437)
+....|+-+.|+ |++++|.|-+... .+.+||..+|.+....- +-.....+
T Consensus 69 ~~~~~V~~~~fS-P~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A 147 (561)
T COG5354 69 FRHPDVKYLDFS-PNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVA 147 (561)
T ss_pred eecCCceecccC-cccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhh
Confidence 445568888999 9999998865443 38899977665443221 11112222
Q ss_pred EecCceEEEEEeeecc--cccc----CCCcceEEeeCC-CCCEEEE-----EECCCcEEEEEcCCCCCCCCeeeeccCCC
Q psy4571 83 CILNISILFFEIIFTQ--NFPF----PLSRQDVAWHLL-HESLFGS-----VADDQKLMIWDTRSHNVSKPSHTVDAHTA 150 (437)
Q Consensus 83 ~~~~~~i~~~~~~~~~--~~~~----~~~v~~~~~sp~-~~~~l~~-----~~~dg~v~vwd~~~~~~~~~~~~~~~h~~ 150 (437)
-....++.++++ ... ..++ +..+....|+|- +...||. ....+.+++|.+.. ...+.+-.-...
T Consensus 148 Rvv~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~---~s~l~tk~lfk~ 223 (561)
T COG5354 148 RVVGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK---NSVLVTKNLFKV 223 (561)
T ss_pred hhccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC---CCeeeeeeeEee
Confidence 234456777775 221 1111 357889999995 2333442 35678899998873 233322111122
Q ss_pred CeEEEEEeCCCCcEEEEEeC----------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEE-EEEeCCCeEE
Q psy4571 151 EVNCLSFNPYSEYILATGSA----------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLH 219 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l-~sg~~dg~i~ 219 (437)
.=..+.|.+.|.++++-.-. ..++.|++++.... .......++|...+|.|.++.+. ++|-.+-.+.
T Consensus 224 ~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i--~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s 301 (561)
T COG5354 224 SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI--PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVS 301 (561)
T ss_pred cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccccc--ceeccccccceeeeecccCCceeEEeccccccee
Confidence 23468899999985543322 24688888885443 22325679999999999987633 2334677899
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE--eCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV--SEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
++|++.. +. +......=+.+.|+|.++++|+.| -..|.+-+||........ ......
T Consensus 302 ~~~lr~N---------------l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~----~~~~~~ 360 (561)
T COG5354 302 VFDLRGN---------------LR--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVA----GAFNGL 360 (561)
T ss_pred ecccccc---------------eE--EecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEE----EEeecC
Confidence 9999874 11 223334556788999999666544 245889999987642222 111234
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
....+.|+|||+++.+....... +....+++||+..
T Consensus 361 n~s~~~wspd~qF~~~~~ts~k~-----~~Dn~i~l~~v~g 396 (561)
T COG5354 361 NTSYCDWSPDGQFYDTDTTSEKL-----RVDNSIKLWDVYG 396 (561)
T ss_pred CceEeeccCCceEEEecCCCccc-----ccCcceEEEEecC
Confidence 45567899999998877654431 1122388898854
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.5e-07 Score=88.65 Aligned_cols=185 Identities=11% Similarity=0.063 Sum_probs=114.2
Q ss_pred CcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC--eEEEEeC
Q psy4571 105 SRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK--TVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg--~i~lwd~ 179 (437)
....-.|+|++...++..+.+ ..|.++|+.++ +.. .+....+......|+|||+.++++.+.++ .|.++|+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg---~~~-~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl 264 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG---KKE-KIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDT 264 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC---cEE-EEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 456789999644435543333 46888898743 222 22234555677889999998666766554 5777787
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.++. ...+..+........|+|||+.++++....+ .|.+.|+.+++..+. +..+.. ...
T Consensus 265 ~~g~--~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rl-------------t~~g~~----~~~ 325 (419)
T PRK04043 265 NTKT--LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQV-------------VFHGKN----NSS 325 (419)
T ss_pred CCCc--EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeC-------------ccCCCc----Cce
Confidence 7654 3344444443445689999998666665555 477777776543211 011211 248
Q ss_pred EccCCCeEEEEEeCC--------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 258 WNPNEPWVICSVSED--------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 258 ~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
|+|+|+.++++...+ ..|.+.|+.++.. +.+... .......|+|||+.++..+..
T Consensus 326 ~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~----~~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 326 VSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN----GVNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred ECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC----CCcCCeEECCCCCEEEEEEcc
Confidence 999999766665443 3688889888753 333221 123346899999987766543
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-07 Score=80.50 Aligned_cols=204 Identities=10% Similarity=0.021 Sum_probs=126.6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
..+||.|+..|...+|.+.+.+ ..+.....|...|.-+.=.-+...-+.-++.|.++++.+++-+.. ........-.
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~--~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~-~~~~h~~~~~ 160 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTND--GHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN-KFAVHNQNLT 160 (344)
T ss_pred ccEEEeccccceeeeecccCcc--cceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc-cceeeccccc
Confidence 5689999999999999998542 223333344443322211112222366778899999988875433 2222111233
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+.+++++++++ ++++.+....|..|.+........ + + ......+.--+.+|+.... .+|++..||++
T Consensus 161 ~ns~~~snd~~-~~~~Vgds~~Vf~y~id~~sey~~---------~-~-~~a~t~D~gF~~S~s~~~~-~FAv~~Qdg~~ 227 (344)
T KOG4532|consen 161 QNSLHYSNDPS-WGSSVGDSRRVFRYAIDDESEYIE---------N-I-YEAPTSDHGFYNSFSENDL-QFAVVFQDGTC 227 (344)
T ss_pred eeeeEEcCCCc-eEEEecCCCcceEEEeCCccceee---------e-e-EecccCCCceeeeeccCcc-eEEEEecCCcE
Confidence 88999999998 588888888999999987654332 0 1 1222233446778988877 89999999999
Q ss_pred EEEeCCCCCCc-eeeeeeecccCC-ceeeeecCCCC--cccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 276 QEYCDSTDSDT-KTMRLDSIRSNG-GISSTASPTAS--STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 276 ~iwd~~~~~~~-~~~~~~~~~~~~-~~~~~~s~~g~--~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.|||++..... ........++.+ ...+.|++.|. +|.....-+. +.+-|+++++....+.
T Consensus 228 ~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~-----------~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 228 AIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSR-----------VHVVDTRNYVNHQVIV 291 (344)
T ss_pred EEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcce-----------EEEEEcccCceeeEEe
Confidence 99999976433 222233334444 44558888665 2333222233 6777777776655553
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-07 Score=81.61 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=145.5
Q ss_pred cCCCCeEEEecCceEEEEEeeecc--cc----cc------C---CCcceEE-eeCCCCCEEEEEECCCcEEEEEcCCCCC
Q psy4571 75 NNYVANISCILNISILFFEIIFTQ--NF----PF------P---LSRQDVA-WHLLHESLFGSVADDQKLMIWDTRSHNV 138 (437)
Q Consensus 75 ~~~~~~i~~~~~~~i~~~~~~~~~--~~----~~------~---~~v~~~~-~sp~~~~~l~~~~~dg~v~vwd~~~~~~ 138 (437)
+.++..+.....|.|.++|..... ++ +. + .+..-+. |++.++.+++..+. |...|.+.. .
T Consensus 275 nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~---~ 350 (668)
T COG4946 275 NSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPW---D 350 (668)
T ss_pred CCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCC---C
Confidence 345567777788889999843321 11 11 1 1112222 66767889888874 667777765 2
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
...++ .+|.+.|.-..+.-+++. ++.|..|| .+-++|.++++ +..+...-+.|.++..+|+|++ ++.+.....
T Consensus 351 ~~~iq--v~~~~~VrY~r~~~~~e~-~vigt~dgD~l~iyd~~~~e--~kr~e~~lg~I~av~vs~dGK~-~vvaNdr~e 424 (668)
T COG4946 351 GYSIQ--VGKKGGVRYRRIQVDPEG-DVIGTNDGDKLGIYDKDGGE--VKRIEKDLGNIEAVKVSPDGKK-VVVANDRFE 424 (668)
T ss_pred CeeEE--cCCCCceEEEEEccCCcc-eEEeccCCceEEEEecCCce--EEEeeCCccceEEEEEcCCCcE-EEEEcCceE
Confidence 22332 367888999999888885 99999999 89999999855 5566667789999999999995 777777778
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeee
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~ 293 (437)
|.+.|+.++..... -+...+-|+.+.|+|+++ .+|-+- .-..|+++|+.+++......
T Consensus 425 l~vididngnv~~i--------------dkS~~~lItdf~~~~nsr-~iAYafP~gy~tq~Iklydm~~~Kiy~vTT--- 486 (668)
T COG4946 425 LWVIDIDNGNVRLI--------------DKSEYGLITDFDWHPNSR-WIAYAFPEGYYTQSIKLYDMDGGKIYDVTT--- 486 (668)
T ss_pred EEEEEecCCCeeEe--------------cccccceeEEEEEcCCce-eEEEecCcceeeeeEEEEecCCCeEEEecC---
Confidence 99999998754221 233456799999999999 454443 34579999999875433222
Q ss_pred cccCCceeeeecCCCCccccc
Q psy4571 294 IRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~ 314 (437)
...--.+.+|.|||++|.--
T Consensus 487 -~ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 487 -PTAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred -CcccccCcccCCCCcEEEEE
Confidence 12233456899999976544
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.1e-06 Score=72.47 Aligned_cols=181 Identities=13% Similarity=0.204 Sum_probs=115.3
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-------cCCCCeEEEEEeCCC-----CcEEEEEeCCCe
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-------AHTAEVNCLSFNPYS-----EYILATGSADKT 173 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-------~h~~~v~~l~~~~~~-----~~~l~sgs~dg~ 173 (437)
=+.++||| ++.+||.+...|+|+++|+... .+..+. .-...|..+.|.+.. .+.|++-..+|.
T Consensus 46 WRkl~WSp-D~tlLa~a~S~G~i~vfdl~g~----~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~ 120 (282)
T PF15492_consen 46 WRKLAWSP-DCTLLAYAESTGTIRVFDLMGS----ELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQ 120 (282)
T ss_pred heEEEECC-CCcEEEEEcCCCeEEEEecccc----eeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccce
Confidence 35799999 7899999999999999999732 222221 113457777776532 234777778888
Q ss_pred EEEEeCCC--Cce--eeeE--ec-cCCCceEEEEEcCCCCcEEEEEeCCC----------eEEEEEcCCCCCCCCCCCCC
Q psy4571 174 VALWDLRN--LKL--KLHS--FE-SHKDEIFQVQWSPHNETILASSGTDR----------RLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 174 i~lwd~~~--~~~--~~~~--~~-~h~~~v~~v~~~p~~~~~l~sg~~dg----------~i~vwd~~~~~~~~~~~~~~ 236 (437)
++-+-+.. .+. .... +. .+...|.++.++|..+-+++.|+... -+..|.+-++.+-.......
T Consensus 121 L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~ 200 (282)
T PF15492_consen 121 LRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSS 200 (282)
T ss_pred eeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEcccc
Confidence 88776532 111 1112 22 24678999999999874444443322 26677776554322211100
Q ss_pred ----C------CCCce----EEEe-cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee
Q psy4571 237 ----D------GPPEL----LFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 237 ----~------~~~~~----~~~~-~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 292 (437)
. .-.+. ++.. ......|..|..+|||. +||+...+|.|.+|++.+-++.+.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~-~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 201 EDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGS-LLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred CccccccccccceeeccceeeeeccccCCCceEEEEECCCCC-EEEEEEcCCeEEEEecCcchhhcccchh
Confidence 0 00000 1111 12356799999999999 8999999999999999998888777654
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=89.78 Aligned_cols=163 Identities=17% Similarity=0.226 Sum_probs=117.1
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC----ce
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL----KL 184 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~----~~ 184 (437)
++|+-.-..+-++.+.+-.|-+-|++++-. +.+. .++.|.++.|...+. ++..|...|.|...|++.. ..
T Consensus 217 CawSlni~gyhfs~G~sqqv~L~nvetg~~----qsf~-sksDVfAlQf~~s~n-Lv~~GcRngeI~~iDLR~rnqG~~~ 290 (425)
T KOG2695|consen 217 CAWSLNIMGYHFSVGLSQQVLLTNVETGHQ----QSFQ-SKSDVFALQFAGSDN-LVFNGCRNGEIFVIDLRCRNQGNGW 290 (425)
T ss_pred hhhhhccceeeecccccceeEEEEeecccc----cccc-cchhHHHHHhcccCC-eeEecccCCcEEEEEeeecccCCCc
Confidence 477753222224455566788889985422 2222 467899999998777 7999999999999999975 34
Q ss_pred eeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE--EccC
Q psy4571 185 KLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS--WNPN 261 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~~p~ 261 (437)
+...+ -|...|+++..-. ++++ |.+.+.+|+|++||++..++... +..++||...-.-+- ..+.
T Consensus 291 ~a~rl-yh~Ssvtslq~Lq~s~q~-LmaS~M~gkikLyD~R~~K~~~~-----------V~qYeGHvN~~a~l~~~v~~e 357 (425)
T KOG2695|consen 291 CAQRL-YHDSSVTSLQILQFSQQK-LMASDMTGKIKLYDLRATKCKKS-----------VMQYEGHVNLSAYLPAHVKEE 357 (425)
T ss_pred ceEEE-EcCcchhhhhhhccccce-EeeccCcCceeEeeehhhhcccc-----------eeeeecccccccccccccccc
Confidence 34444 3889999998776 5664 67778899999999998765332 556778865433333 3455
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.. .+++++.|...+||.+..+..+.+++.
T Consensus 358 eg-~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 358 EG-SIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred cc-eEEEccCeeEEEEEecccCceeeccCC
Confidence 55 778899999999999999988877764
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.7e-08 Score=88.18 Aligned_cols=261 Identities=11% Similarity=0.062 Sum_probs=161.3
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEEC
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVAD 124 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~ 124 (437)
...+.+.++|.|+.+|.|....-.....+ .+ ...+-..+..++.+- ++-++.+++.
T Consensus 18 tka~fiiqASlDGh~KFWkKs~isGvEfV--Kh---------------------FraHL~~I~sl~~S~-dg~L~~Sv~d 73 (558)
T KOG0882|consen 18 TKAKFIIQASLDGHKKFWKKSRISGVEFV--KH---------------------FRAHLGVILSLAVSY-DGWLFRSVED 73 (558)
T ss_pred ehhheEEeeecchhhhhcCCCCccceeeh--hh---------------------hHHHHHHHHhhhccc-cceeEeeccC
Confidence 44678999999999999996431111110 00 011222344555555 6778888777
Q ss_pred -CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCcee-eeEeccCCCceEEEE
Q psy4571 125 -DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQ 200 (437)
Q Consensus 125 -dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~h~~~v~~v~ 200 (437)
|..++++|+++-+....++. .--.+.+. +..+|... .+-++.-.+|.+.++|-.....+ ...-.-|..+|.++.
T Consensus 74 ~Dhs~KvfDvEn~DminmiKL-~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~ 151 (558)
T KOG0882|consen 74 PDHSVKVFDVENFDMINMIKL-VDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIR 151 (558)
T ss_pred cccceeEEEeeccchhhhccc-ccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEE
Confidence 99999999985432222221 11222222 22233211 13344456899999998764432 333456899999999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCC-CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEe
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd 279 (437)
++|.+. .+++....|.|.-|.... .+.+.............+..+...+....++.|+|++. .+.+-+.|..|++++
T Consensus 152 y~qa~D-s~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~-qistl~~DrkVR~F~ 229 (558)
T KOG0882|consen 152 YNQAGD-SAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGA-QISTLNPDRKVRGFV 229 (558)
T ss_pred eecccc-ceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccC-cccccCcccEEEEEE
Confidence 999998 478888889999999874 11111100011111122333344456778999999999 788888999999999
Q ss_pred CCCCCCceeeee------------------------------eecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 280 DSTDSDTKTMRL------------------------------DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 280 ~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.+++..+.+.- ..........+.|...|++|.-|+.-|
T Consensus 230 ~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g----------- 298 (558)
T KOG0882|consen 230 FKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG----------- 298 (558)
T ss_pred eccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-----------
Confidence 999886655531 001112234457788888888887655
Q ss_pred ccccccchhhhhhhhh
Q psy4571 330 GLVLFDILVCEEQRQL 345 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~ 345 (437)
|++.++.++...+.+
T Consensus 299 -ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 299 -IKVINLDTNTVVRIL 313 (558)
T ss_pred -EEEEEeecCeEEEEe
Confidence 677888777665544
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.1e-07 Score=85.18 Aligned_cols=188 Identities=11% Similarity=-0.012 Sum_probs=113.8
Q ss_pred CeEEEEEeCCCCcEEE-EEeC--CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--CeEEEEEcCC
Q psy4571 151 EVNCLSFNPYSEYILA-TGSA--DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--RRLHVWDLSK 225 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~-sgs~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d--g~i~vwd~~~ 225 (437)
....-.|+|+|+.+++ +... +..|.++|+.+++. ..+....+......|+|||+.++++.+.+ ..|.++|+.+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~--~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~ 266 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK--EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT 266 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE--EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 7788999999986344 3333 35688999988654 23333456667788999999776666555 4577778766
Q ss_pred CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
+... .+..+........|+|||+.++++....+ .|++.|+.+++..+... . +.....
T Consensus 267 g~~~---------------~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~-----g~~~~~ 325 (419)
T PRK04043 267 KTLT---------------QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF-H-----GKNNSS 325 (419)
T ss_pred CcEE---------------EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc-C-----CCcCce
Confidence 5321 12222222334579999996666654444 68888888775533221 1 112348
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
|||||+.++..+...... +.. ....+.+.|+.+|+. +.+.... ......++|||..++
T Consensus 326 ~SPDG~~Ia~~~~~~~~~-~~~-~~~~I~v~d~~~g~~-~~LT~~~-~~~~p~~SPDG~~I~ 383 (419)
T PRK04043 326 VSTYKNYIVYSSRETNNE-FGK-NTFNLYLISTNSDYI-RRLTANG-VNQFPRFSSDGGSIM 383 (419)
T ss_pred ECCCCCEEEEEEcCCCcc-cCC-CCcEEEEEECCCCCe-EECCCCC-CcCCeEECCCCCEEE
Confidence 999999887665432100 000 012277778877754 4444332 223467899997543
|
|
| >KOG1955|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-09 Score=96.66 Aligned_cols=60 Identities=43% Similarity=0.830 Sum_probs=54.2
Q ss_pred CccccccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 361 DTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 361 ~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
+.......|.++.++++||.++|++++++.+ |+|+|+.+++||++|+|||+||+.||.+.
T Consensus 215 nsS~~d~pw~IT~EQReYYvnQFrtvQpDp~------gfisGsaAknFFtKSklpi~ELshIWeLs 274 (737)
T KOG1955|consen 215 NSSELDTPWQITPEQREYYVNQFRTVQPDPH------GFISGSAAKNFFTKSKLPIEELSHIWELS 274 (737)
T ss_pred cccccCCccccCHHHHHHHHhhhhcccCCcc------cccccHHHHhhhhhccCchHHHHHHHhhc
Confidence 3344556999999999999999999999888 89999999999999999999999999764
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.8e-06 Score=77.49 Aligned_cols=223 Identities=9% Similarity=0.001 Sum_probs=129.9
Q ss_pred cCceEEEEEeeecc---ccccCCC--------cceEEeeCCCCCEEEEEE-C-CCcEEEEEcCCCCCCCCeeeeccCCCC
Q psy4571 85 LNISILFFEIIFTQ---NFPFPLS--------RQDVAWHLLHESLFGSVA-D-DQKLMIWDTRSHNVSKPSHTVDAHTAE 151 (437)
Q Consensus 85 ~~~~i~~~~~~~~~---~~~~~~~--------v~~~~~sp~~~~~l~~~~-~-dg~v~vwd~~~~~~~~~~~~~~~h~~~ 151 (437)
.++.|.+||....+ +++.+.. ...++++| +++++++.. . +..|.+.|+. ..+.+..+.- .+.
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~-dgk~l~V~n~~p~~~V~VvD~~---~~kvv~ei~v-p~~ 149 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTP-DNKTLLFYQFSPSPAVGVVDLE---GKAFVRMMDV-PDC 149 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECC-CCCEEEEecCCCCCEEEEEECC---CCcEEEEEeC-CCC
Confidence 46789999976544 3344333 33899999 566666554 4 7899999999 4555554432 112
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-e---Eecc-----CCCceEEEEEcC-CCCcEEEEEeCCCeEEEE
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-H---SFES-----HKDEIFQVQWSP-HNETILASSGTDRRLHVW 221 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~-~---~~~~-----h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vw 221 (437)
..-...++ .. ..+-+.||......+.+..... . .+.. ...+ .|.+ +|+.++++ . .|+|.+.
T Consensus 150 ~~vy~t~e-~~--~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs-~-eG~V~~i 220 (352)
T TIGR02658 150 YHIFPTAN-DT--FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPT-Y-TGKIFQI 220 (352)
T ss_pred cEEEEecC-Cc--cEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCC----ceEcCCCcEEEEe-c-CCeEEEE
Confidence 22222221 11 1222344544443333211101 0 1111 0122 4455 77754443 3 3999999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEe--c-----CccccEEEEEEccCCCeEEEEE---------eCCCeEEEEeCCCCCC
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIH--G-----GHTAKISDFSWNPNEPWVICSV---------SEDNIMQEYCDSTDSD 285 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~--~-----~h~~~v~~l~~~p~~~~~l~s~---------~~dg~i~iwd~~~~~~ 285 (437)
|+........ ..+..+ . -..+.+.-++++|+++.+++.. ...+.|.++|..+++.
T Consensus 221 d~~~~~~~~~---------~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv 291 (352)
T TIGR02658 221 DLSSGDAKFL---------PAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR 291 (352)
T ss_pred ecCCCcceec---------ceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeE
Confidence 9766432221 111111 0 1233445599999999666643 1225899999999988
Q ss_pred ceeeeeeecccCCceeeeecCCCC-cccccC-CCCcccccccccccccccccchhhhhhhhh
Q psy4571 286 TKTMRLDSIRSNGGISSTASPTAS-STASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
+..+.. ...+..++++|||+ +|.+.. .++. +.+.|..+++.++++
T Consensus 292 i~~i~v----G~~~~~iavS~Dgkp~lyvtn~~s~~-----------VsViD~~t~k~i~~i 338 (352)
T TIGR02658 292 LRKIEL----GHEIDSINVSQDAKPLLYALSTGDKT-----------LYIFDAETGKELSSV 338 (352)
T ss_pred EEEEeC----CCceeeEEECCCCCeEEEEeCCCCCc-----------EEEEECcCCeEEeee
Confidence 888775 34677789999999 766554 4555 789999999988877
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.3e-08 Score=92.87 Aligned_cols=199 Identities=15% Similarity=0.152 Sum_probs=133.3
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC----CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV----SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
...|..++--. +++-|++++.|.+|++|.++.... ..+-.++..|+.+|.++.|-.+.++ ++ +.||-|.+||
T Consensus 735 ~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~-i~--ScD~giHlWD 810 (1034)
T KOG4190|consen 735 QEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRS-IA--SCDGGIHLWD 810 (1034)
T ss_pred HHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccce-ee--eccCcceeec
Confidence 33455554433 678899999999999999975432 2244577899999999999988775 54 5689999999
Q ss_pred CCCCceeeeEec--cCCCceEEEEEcCC-CCcEEEEE-eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 179 LRNLKLKLHSFE--SHKDEIFQVQWSPH-NETILASS-GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 179 ~~~~~~~~~~~~--~h~~~v~~v~~~p~-~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.--++. +..+. ...+.+..+..-|+ .+.+++.| +...+|+++|.+..+-..++. +....+.+..++
T Consensus 811 PFigr~-Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~k---------Vcna~~Pna~~R 880 (1034)
T KOG4190|consen 811 PFIGRL-LAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELK---------VCNAPGPNALTR 880 (1034)
T ss_pred ccccch-hHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEE---------eccCCCCchhee
Confidence 876443 22221 11223333333343 33445555 778899999999876544311 122245567789
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+++..|.|+ .++.+-.+|+|.+.|.++|+.+..++.. ...... ...|..+.++....|.++
T Consensus 881 ~iaVa~~GN-~lAa~LSnGci~~LDaR~G~vINswrpm---ecdllq-laapsdq~L~~saldHsl 941 (1034)
T KOG4190|consen 881 AIAVADKGN-KLAAALSNGCIAILDARNGKVINSWRPM---ECDLLQ-LAAPSDQALAQSALDHSL 941 (1034)
T ss_pred EEEeccCcc-hhhHHhcCCcEEEEecCCCceeccCCcc---cchhhh-hcCchhHHHHhhccccee
Confidence 999999999 6778889999999999999877766531 111111 335667777777777663
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.5e-08 Score=84.28 Aligned_cols=210 Identities=15% Similarity=0.193 Sum_probs=139.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC--CCCCeeeeccCC------------CCeEEEEEeC-CCCcEEEEE
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--VSKPSHTVDAHT------------AEVNCLSFNP-YSEYILATG 168 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~h~------------~~v~~l~~~~-~~~~~l~sg 168 (437)
..|+++.|.. .+.++++|...|.|.+|.-+... ..+....+++|. ..|..+.|.. .++..++..
T Consensus 27 d~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 27 DKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred ceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4678899988 58899999999999999766321 122334455664 3578888864 444457778
Q ss_pred eCCCeEEEEeCCCCc------------------e-----------------------eeeEe-ccCCCceEEEEEcCCCC
Q psy4571 169 SADKTVALWDLRNLK------------------L-----------------------KLHSF-ESHKDEIFQVQWSPHNE 206 (437)
Q Consensus 169 s~dg~i~lwd~~~~~------------------~-----------------------~~~~~-~~h~~~v~~v~~~p~~~ 206 (437)
+.|.+|++|.+.... . +.+.+ ..|...+.++.|+.+.+
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 899999999876420 0 01111 35777789999999887
Q ss_pred cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc-----cccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH-----TAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 207 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
+ ++++ .|-+|.+|++........ +.-.+.| ..-|++..|+|....++.-.+..|.|++-|++
T Consensus 186 t-~lSa-DdLrINLWnl~i~D~sFn-----------IVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlR 252 (460)
T COG5170 186 T-LLSA-DDLRINLWNLEIIDGSFN-----------IVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLR 252 (460)
T ss_pred e-eeec-cceeeeeccccccCCceE-----------EEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhh
Confidence 5 5554 578899999876432211 1223333 34588899999888788888899999999998
Q ss_pred CCCC------ceeeeeeecc-------cCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 282 TDSD------TKTMRLDSIR-------SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 282 ~~~~------~~~~~~~~~~-------~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
.... +......... ........|+++|+++++-+.- + +++||....
T Consensus 253 q~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-t-----------vkiwDvnm~ 311 (460)
T COG5170 253 QSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-T-----------VKIWDVNMA 311 (460)
T ss_pred hhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-e-----------EEEEecccc
Confidence 4321 1111111111 1233345899999999987644 3 677777553
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.4e-06 Score=77.59 Aligned_cols=281 Identities=13% Similarity=0.150 Sum_probs=160.3
Q ss_pred eEEEecCCCCeEEEecCceEEEEEee---eccccccCCCcceEEeeCCCCCEEEEEEC-----------CCcEEEEEcCC
Q psy4571 70 YDLVVNNYVANISCILNISILFFEII---FTQNFPFPLSRQDVAWHLLHESLFGSVAD-----------DQKLMIWDTRS 135 (437)
Q Consensus 70 ~~~~~~~~~~~i~~~~~~~i~~~~~~---~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-----------dg~v~vwd~~~ 135 (437)
.-+.|+|.+.+++......|.+|-.. ..+++.| ..|.-+.||| +.++|++-+. ...++|||+.+
T Consensus 214 tyv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~H-p~Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t 291 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFYH-PGVQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT 291 (698)
T ss_pred eeEEecCCceEEEEEeccceeeecCccHHHHHhccC-CCceeeecCC-ccceEEEecCCccccCcccCCCceEEEEEccc
Confidence 34567899998888888889999643 2333333 4688999999 7889987653 25799999995
Q ss_pred CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe--
Q psy4571 136 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-- 213 (437)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~-- 213 (437)
+...+....++.....-.-..||.|+++ +|--.. .+|.|++..+... +..-.-....|....|+|.+. +||-=.
T Consensus 292 G~lkrsF~~~~~~~~~WP~frWS~DdKy-~Arm~~-~sisIyEtpsf~l-ld~Kslki~gIr~FswsP~~~-llAYwtpe 367 (698)
T KOG2314|consen 292 GLLKRSFPVIKSPYLKWPIFRWSHDDKY-FARMTG-NSISIYETPSFML-LDKKSLKISGIRDFSWSPTSN-LLAYWTPE 367 (698)
T ss_pred cchhcceeccCCCccccceEEeccCCce-eEEecc-ceEEEEecCceee-ecccccCCccccCcccCCCcc-eEEEEccc
Confidence 5333322232222222334789999996 665555 5799998876332 211111235678888999876 555321
Q ss_pred CC---CeEEEEEcCCCCCCCCCCCCCC---------------------------CCC--ceEEEec---------Ccccc
Q psy4571 214 TD---RRLHVWDLSKIGEEQSTEDAED---------------------------GPP--ELLFIHG---------GHTAK 252 (437)
Q Consensus 214 ~d---g~i~vwd~~~~~~~~~~~~~~~---------------------------~~~--~~~~~~~---------~h~~~ 252 (437)
.+ ..+.+-.+.+.+...+.....- +.. -.++.+. .-...
T Consensus 368 ~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~ 447 (698)
T KOG2314|consen 368 TNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKES 447 (698)
T ss_pred ccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchh
Confidence 11 1244444444433322211000 000 0011111 12345
Q ss_pred EEEEEEccCCCeEEEEEeC--CCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 253 ISDFSWNPNEPWVICSVSE--DNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~--dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
|-..+|-|.|+.+.+..+. -.++.+|.+++. .....+. .........+.|+|.|++++.+.--+. ..
T Consensus 448 vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk--~~dk~~~N~vfwsPkG~fvvva~l~s~--------~g 517 (698)
T KOG2314|consen 448 VIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVK--ELDKKFANTVFWSPKGRFVVVAALVSR--------RG 517 (698)
T ss_pred eeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhh--hhcccccceEEEcCCCcEEEEEEeccc--------cc
Confidence 6778999999844433332 467888988842 2111111 112345566799999999887753321 01
Q ss_pred ccccccchhhhhhh-hhcCCCccccccCCCCCCcccccc
Q psy4571 330 GLVLFDILVCEEQR-QLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 330 ~i~~wd~~~~~~~~-~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+.++|........ ....|. ..+.+.+.|.|+.+.++
T Consensus 518 ~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ 555 (698)
T KOG2314|consen 518 DLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTS 555 (698)
T ss_pred ceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEe
Confidence 16777776533222 224454 36677899999887765
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.5e-05 Score=71.14 Aligned_cols=226 Identities=10% Similarity=0.038 Sum_probs=138.0
Q ss_pred EEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCE
Q psy4571 39 RLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 118 (437)
..+|....+.++.+....+.|.-|+..++...... .+. ...+++.+.+ ..
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~----------------------------~~~-~~G~~~~~~~-g~ 53 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVID----------------------------LPG-PNGMAFDRPD-GR 53 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE----------------------------SSS-EEEEEEECTT-SE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEe----------------------------cCC-CceEEEEccC-CE
Confidence 45666336666666666666666666555443221 111 4566777324 45
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeec--c-CCCCeEEEEEeCCCCcEEEEEeCC--------CeEEEEeCCCCceeee
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVD--A-HTAEVNCLSFNPYSEYILATGSAD--------KTVALWDLRNLKLKLH 187 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~-h~~~v~~l~~~~~~~~~l~sgs~d--------g~i~lwd~~~~~~~~~ 187 (437)
|+.+..++ +.++|+.++. .+.+.... . .....+.+++.|+|. +.++.... |.|..++.. ++ ..
T Consensus 54 l~v~~~~~-~~~~d~~~g~-~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~--~~ 127 (246)
T PF08450_consen 54 LYVADSGG-IAVVDPDTGK-VTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK--VT 127 (246)
T ss_dssp EEEEETTC-EEEEETTTTE-EEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE--EE
T ss_pred EEEEEcCc-eEEEecCCCc-EEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce--EE
Confidence 55566554 5666887442 22233321 1 345789999999998 56666544 567777777 33 22
Q ss_pred EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 188 ~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
.....-...+.++|+|+++.++++-+..+.|..+++........ ..+.+..+..-.+..-.+++..+|+ +.+
T Consensus 128 ~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~g~pDG~~vD~~G~-l~v 199 (246)
T PF08450_consen 128 VVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELS-------NRRVFIDFPGGPGYPDGLAVDSDGN-LWV 199 (246)
T ss_dssp EEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEE-------EEEEEEE-SSSSCEEEEEEEBTTS--EEE
T ss_pred EEecCcccccceEECCcchheeecccccceeEEEecccccccee-------eeeeEEEcCCCCcCCCcceEcCCCC-EEE
Confidence 33333456789999999997677888899999999975432111 0122222333334578899999998 777
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCccc
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTA 312 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~ 312 (437)
+....+.|.++|.+ |+.+..+... ...+.+++| .++...|.
T Consensus 200 a~~~~~~I~~~~p~-G~~~~~i~~p---~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 200 ADWGGGRIVVFDPD-GKLLREIELP---VPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp EEETTTEEEEEETT-SCEEEEEE-S---SSSEEEEEEESTTSSEEE
T ss_pred EEcCCCEEEEECCC-ccEEEEEcCC---CCCEEEEEEECCCCCEEE
Confidence 77789999999988 8777777653 236777788 46655444
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.6e-08 Score=82.71 Aligned_cols=76 Identities=32% Similarity=0.597 Sum_probs=69.0
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
..|.+++-+|..++++++|+.||.+.+||++....+...+..|+.++..+-|+|..+.-|++++.||.+.-||..+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 3499999999988899999999999999999987777788999999999999998766689999999999999875
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.3e-07 Score=83.27 Aligned_cols=126 Identities=12% Similarity=0.186 Sum_probs=90.2
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
..+...+++.|-.. ......+..-|.++-+|+-....+. ....-+|-..+++++|+||+++ |+++..|..|++-...
T Consensus 105 ~v~~~~~ai~~~~~-~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~~-IitaDRDEkIRvs~yp 181 (390)
T KOG3914|consen 105 CVPKRPTAISFIRE-DTSVLVADKAGDVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQF-IITADRDEKIRVSRYP 181 (390)
T ss_pred ecccCcceeeeeec-cceEEEEeecCCceeeeeecccccC-cchhhhhhhhhheeeecCCCCE-EEEecCCceEEEEecC
Confidence 34556667777663 3444445555555544443221222 2344589999999999999995 9999999999998776
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
.....-.-..+|+.-|..++.-++. .|++||.|++|++||+++++....
T Consensus 182 a~f~IesfclGH~eFVS~isl~~~~--~LlS~sGD~tlr~Wd~~sgk~L~t 230 (390)
T KOG3914|consen 182 ATFVIESFCLGHKEFVSTISLTDNY--LLLSGSGDKTLRLWDITSGKLLDT 230 (390)
T ss_pred cccchhhhccccHhheeeeeeccCc--eeeecCCCCcEEEEecccCCcccc
Confidence 5443222345799999999998765 488999999999999999987654
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.5e-08 Score=98.93 Aligned_cols=200 Identities=19% Similarity=0.206 Sum_probs=143.5
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-e
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-R 217 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-~ 217 (437)
.+..+.+..|....+|++|+-+..+ |+.|+..|.|+++++.++.. .....+|+.+|+.+.-+.+|...|.+++... .
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~h-L~vG~~~Geik~~nv~sG~~-e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNH-LAVGSHAGEIKIFNVSSGSM-EESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPL 1168 (1516)
T ss_pred cccchhhhccccceeeEEeecCCce-EEeeeccceEEEEEccCccc-cccccccccccccccccCCcceeeeeccccCch
Confidence 3456677788899999999998886 99999999999999999776 6778899999999999999997555555444 4
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee-ccc
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-IRS 296 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~ 296 (437)
..+|++....... +.+ ..-.++.|+..-+ .-+.|..-....+||++++..+.++.... ...
T Consensus 1169 saLW~~~s~~~~~-------------Hsf----~ed~~vkFsn~~q-~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~ 1230 (1516)
T KOG1832|consen 1169 SALWDASSTGGPR-------------HSF----DEDKAVKFSNSLQ-FRALGTEADDALLYDVQTCSPLQTYLTDTVTSS 1230 (1516)
T ss_pred HHHhccccccCcc-------------ccc----cccceeehhhhHH-HHHhcccccceEEEecccCcHHHHhcCcchhhh
Confidence 7799987632111 112 2346788877655 23344444568899999998887754322 222
Q ss_pred CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc--cccccCHH
Q psy4571 297 NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN--SIWSMTDE 374 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~--~~w~~~~~ 374 (437)
.....+.|+|+..++.-.+ .+||+...+.++.+..... --.-.|+|+|..+.. ++|++..-
T Consensus 1231 y~~n~a~FsP~D~LIlndG----------------vLWDvR~~~aIh~FD~ft~-~~~G~FHP~g~eVIINSEIwD~RTF 1293 (1516)
T KOG1832|consen 1231 YSNNLAHFSPCDTLILNDG----------------VLWDVRIPEAIHRFDQFTD-YGGGGFHPSGNEVIINSEIWDMRTF 1293 (1516)
T ss_pred hhccccccCCCcceEeeCc----------------eeeeeccHHHHhhhhhhee-cccccccCCCceEEeechhhhhHHH
Confidence 2334558899888777543 6799998888888876663 334458888887664 49988543
Q ss_pred H
Q psy4571 375 Q 375 (437)
Q Consensus 375 ~ 375 (437)
.
T Consensus 1294 ~ 1294 (1516)
T KOG1832|consen 1294 K 1294 (1516)
T ss_pred H
Confidence 3
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-05 Score=73.36 Aligned_cols=222 Identities=9% Similarity=0.014 Sum_probs=132.2
Q ss_pred eeCCCcceEEEeec----------cCceEeeecCCCcee------------------EEEecCCCCeEEEec---CceEE
Q psy4571 42 VAEPFDDAVEERVI----------NEEYKIWKKNTPFLY------------------DLVVNNYVANISCIL---NISIL 90 (437)
Q Consensus 42 ~~~~~~~~l~tgs~----------d~~v~iw~~~~~~~~------------------~~~~~~~~~~i~~~~---~~~i~ 90 (437)
++ |+++.++.+.. +..|.+||..+.... .+.+++++..+.... +..+.
T Consensus 53 ~s-pDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~ 131 (352)
T TIGR02658 53 VA-SDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG 131 (352)
T ss_pred EC-CCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence 66 88887777655 789999997765543 344455555554322 56788
Q ss_pred EEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee---eccC-----CCCeEEEEEeC
Q psy4571 91 FFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT---VDAH-----TAEVNCLSFNP 159 (437)
Q Consensus 91 ~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~~h-----~~~v~~l~~~~ 159 (437)
+.|+...+. ++.+....-...+. .. +.+-+.||......+...+... ... +..- ..+ .|.+
T Consensus 132 VvD~~~~kvv~ei~vp~~~~vy~t~e-~~--~~~~~~Dg~~~~v~~d~~g~~~-~~~~~vf~~~~~~v~~rP----~~~~ 203 (352)
T TIGR02658 132 VVDLEGKAFVRMMDVPDCYHIFPTAN-DT--FFMHCRDGSLAKVGYGTKGNPK-IKPTEVFHPEDEYLINHP----AYSN 203 (352)
T ss_pred EEECCCCcEEEEEeCCCCcEEEEecC-Cc--cEEEeecCceEEEEecCCCceE-EeeeeeecCCccccccCC----ceEc
Confidence 888665443 33333222233322 12 2233456666665554332211 111 1110 112 4455
Q ss_pred -CCCcEEEEEeCCCeEEEEeCCCCc----eeeeEec-------cCCCceEEEEEcCCCCcEEEEEe---------CCCeE
Q psy4571 160 -YSEYILATGSADKTVALWDLRNLK----LKLHSFE-------SHKDEIFQVQWSPHNETILASSG---------TDRRL 218 (437)
Q Consensus 160 -~~~~~l~sgs~dg~i~lwd~~~~~----~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sg~---------~dg~i 218 (437)
+|.. +....+ |+|.+.|+.... .+...+. -..+...-++++|+++++++... ..+.|
T Consensus 204 ~dg~~-~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V 281 (352)
T TIGR02658 204 KSGRL-VWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFL 281 (352)
T ss_pred CCCcE-EEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEE
Confidence 7775 555555 999999965422 1121111 12345566999999997665431 22579
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.++|..+.+.... ... ...+..++++||++ .++++...++.|.+.|..+++.++.+
T Consensus 282 ~ViD~~t~kvi~~--------------i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 282 FVVDAKTGKRLRK--------------IEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred EEEECCCCeEEEE--------------EeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 9999988654332 221 34789999999999 66667768899999999999888877
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.9e-06 Score=84.79 Aligned_cols=242 Identities=14% Similarity=0.189 Sum_probs=149.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC----------------------------C------C------------
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------------------T------P------------ 67 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------------------~------~------------ 67 (437)
.-+|.+++|+ |++++++....++++-+...+ + |
T Consensus 120 d~GI~a~~WS-PD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~ 198 (928)
T PF04762_consen 120 DSGILAASWS-PDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTV 198 (928)
T ss_pred cCcEEEEEEC-CCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCC
Confidence 4579999999 999999999888887766511 0 0
Q ss_pred ------------ceeEEEecCCCCeEEEec----C---ceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEEC
Q psy4571 68 ------------FLYDLVVNNYVANISCIL----N---ISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVAD 124 (437)
Q Consensus 68 ------------~~~~~~~~~~~~~i~~~~----~---~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~ 124 (437)
....+.|-+++++++++. . ..+++|+-. +.-. +...--.+++|-| .++++|+...
T Consensus 199 ~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrP-sG~lIA~~q~ 276 (928)
T PF04762_consen 199 PKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRP-SGNLIASSQR 276 (928)
T ss_pred CccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCC-CCCEEEEEEE
Confidence 122344666777664431 1 367888743 1111 2223345889999 6888887754
Q ss_pred ---CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE-ec-cCCCceEEE
Q psy4571 125 ---DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQV 199 (437)
Q Consensus 125 ---dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~-~h~~~v~~v 199 (437)
...|.+|.-+....++....+......|..++|++++. +||.-..|. |.+|-..+....++. +. .....+..+
T Consensus 277 ~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~-iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~ 354 (928)
T PF04762_consen 277 LPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSE-ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFV 354 (928)
T ss_pred cCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCC-EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCce
Confidence 34566666542222222222223456899999999999 688877665 999998875543322 21 123345569
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEEcC----CCCCCCCC-----------------CCCCCCCCce-EEEecCccccEEEEE
Q psy4571 200 QWSPHNETILASSGTDRRLHVWDLS----KIGEEQST-----------------EDAEDGPPEL-LFIHGGHTAKISDFS 257 (437)
Q Consensus 200 ~~~p~~~~~l~sg~~dg~i~vwd~~----~~~~~~~~-----------------~~~~~~~~~~-~~~~~~h~~~v~~l~ 257 (437)
.|+|..+..|.....+|.+..++.. .+...... ......|+.+ .+.+ .-...|.+++
T Consensus 355 ~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~va 433 (928)
T PF04762_consen 355 KWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVA 433 (928)
T ss_pred EECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEE
Confidence 9999887767777776776555442 22110000 0011222222 2222 3356899999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
|++++. .+++-..||.|.+|....
T Consensus 434 f~~~~~-~~avl~~d~~l~~~~~~~ 457 (928)
T PF04762_consen 434 FSPSNS-RFAVLTSDGSLSIYEWDL 457 (928)
T ss_pred EeCCCC-eEEEEECCCCEEEEEecC
Confidence 999988 588889999999998554
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=90.18 Aligned_cols=164 Identities=12% Similarity=0.172 Sum_probs=121.8
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC------------CCCeeeeccCCCCeEEEEEeCCCCcEEEEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV------------SKPSHTVDAHTAEVNCLSFNPYSEYILATG 168 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~------------~~~~~~~~~h~~~v~~l~~~~~~~~~l~sg 168 (437)
+-+....|++|+. ..+++|+|+.||.++|..+.+... ...-+++.+|.+.|.-+.|+.+.+. |.|+
T Consensus 12 PnnvkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QK-LTtS 89 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQK-LTTS 89 (1189)
T ss_pred CCCceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccc-cccc
Confidence 3445678999999 788999999999999998875421 1223567899999999999999886 9999
Q ss_pred eCCCeEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 169 SADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 169 s~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
..+|.|.+|-+-.+..+..... ..+.-|.+++|+.+|.. ++..-.||.|.|=.+.....-.. .++
T Consensus 90 Dt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~k-IcIvYeDGavIVGsvdGNRIwgK-------------eLk 155 (1189)
T KOG2041|consen 90 DTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTK-ICIVYEDGAVIVGSVDGNRIWGK-------------ELK 155 (1189)
T ss_pred CCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcE-EEEEEccCCEEEEeeccceecch-------------hcc
Confidence 9999999999988765333222 23466899999999985 77777888887766654321111 011
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+ .....+.|++|.+ ++..+-.+|.+.++|.+..
T Consensus 156 g--~~l~hv~ws~D~~-~~Lf~~ange~hlydnqgn 188 (1189)
T KOG2041|consen 156 G--QLLAHVLWSEDLE-QALFKKANGETHLYDNQGN 188 (1189)
T ss_pred h--heccceeecccHH-HHHhhhcCCcEEEeccccc
Confidence 2 2345788999998 6667778899999997643
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-08 Score=97.11 Aligned_cols=213 Identities=12% Similarity=0.093 Sum_probs=147.5
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-eEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-TVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-~i~lwd~~~ 181 (437)
...-+|++|+- +.+.|+.|+..|.|+++++. .+.......+|..+|+-+.=+.+|..+|.+++... ...+|++..
T Consensus 1101 ~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~---sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1101 TALFTCIAFSG-GTNHLAVGSHAGEIKIFNVS---SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred ccceeeEEeec-CCceEEeeeccceEEEEEcc---CccccccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 35678999999 78899999999999999999 45566677899999999999999996555555555 578999987
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
...+...+. .-.++.|+..-.. -+.|.......+||+.+.....++.. -..+....-++..|+|+
T Consensus 1177 ~~~~~Hsf~----ed~~vkFsn~~q~-r~~gt~~d~a~~YDvqT~~~l~tylt----------~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1177 TGGPRHSFD----EDKAVKFSNSLQF-RALGTEADDALLYDVQTCSPLQTYLT----------DTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred ccCcccccc----ccceeehhhhHHH-HHhcccccceEEEecccCcHHHHhcC----------cchhhhhhccccccCCC
Confidence 444454543 2357888765443 34455556789999999876554210 01122223377889999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.. ++. .||. +||++..+.+..+... .....-.|+|.|.-++..+ .+||+.|.+.
T Consensus 1242 D~-LIl---ndGv--LWDvR~~~aIh~FD~f----t~~~~G~FHP~g~eVIINS----------------EIwD~RTF~l 1295 (1516)
T KOG1832|consen 1242 DT-LIL---NDGV--LWDVRIPEAIHRFDQF----TDYGGGGFHPSGNEVIINS----------------EIWDMRTFKL 1295 (1516)
T ss_pred cc-eEe---eCce--eeeeccHHHHhhhhhh----eecccccccCCCceEEeec----------------hhhhhHHHHH
Confidence 98 553 4664 7999987666655421 1233347899999888765 7899999999
Q ss_pred hhhhcCCCccccccCCCCCCc
Q psy4571 342 QRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~~~~~~~ 362 (437)
++.+..... ..+.|...|.
T Consensus 1296 Lh~VP~Ldq--c~VtFNstG~ 1314 (1516)
T KOG1832|consen 1296 LHSVPSLDQ--CAVTFNSTGD 1314 (1516)
T ss_pred HhcCccccc--eEEEeccCcc
Confidence 887755432 2333444443
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.7e-05 Score=67.51 Aligned_cols=212 Identities=16% Similarity=0.115 Sum_probs=123.2
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC---CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH---TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h---~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
+.+. +|++||+ -.|..|.|-..+++- ...+...+-. .-.=..++||||+. +||.+...|+|+++|+-... +
T Consensus 4 ~~~~-~Gk~lAi-~qd~~iEiRsa~Ddf-~si~~kcqVpkD~~PQWRkl~WSpD~t-lLa~a~S~G~i~vfdl~g~~--l 77 (282)
T PF15492_consen 4 ALSS-DGKLLAI-LQDQCIEIRSAKDDF-SSIIGKCQVPKDPNPQWRKLAWSPDCT-LLAYAESTGTIRVFDLMGSE--L 77 (282)
T ss_pred eecC-CCcEEEE-EeccEEEEEeccCCc-hheeEEEecCCCCCchheEEEECCCCc-EEEEEcCCCeEEEEecccce--e
Confidence 3444 5666654 557778877766432 2222222222 22356799999999 69999999999999998533 2
Q ss_pred eEecc-------CCCceEEEEEcCCC-----CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-ccccE
Q psy4571 187 HSFES-------HKDEIFQVQWSPHN-----ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKI 253 (437)
Q Consensus 187 ~~~~~-------h~~~v~~v~~~p~~-----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v 253 (437)
..+.. -...|..+.|.+.. .+.|+.-..+|.++-|-+..+....-. ..--+.+.. +...|
T Consensus 78 f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~-------e~hsfsf~~~yp~Gi 150 (282)
T PF15492_consen 78 FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQ-------ENHSFSFSSHYPHGI 150 (282)
T ss_pred EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcce-------eeEEEEecccCCCce
Confidence 22221 23456677775432 234556677888888876433211110 011122333 36789
Q ss_pred EEEEEccCCCeEEEEEeCCC----------eEEEEeCCCCCCcee---------------------ee--e---eecccC
Q psy4571 254 SDFSWNPNEPWVICSVSEDN----------IMQEYCDSTDSDTKT---------------------MR--L---DSIRSN 297 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~---------------------~~--~---~~~~~~ 297 (437)
.++.++|..+-+++.|.... -+..|.+-++.+-.. .. . ......
T Consensus 151 ~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d 230 (282)
T PF15492_consen 151 NSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQD 230 (282)
T ss_pred eEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCC
Confidence 99999999985555554322 256676543322111 00 0 011345
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccc
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF 334 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~w 334 (437)
++..+..||||+.|++...+|.+.+|+-...+..+.|
T Consensus 231 ~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 231 GIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred ceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 6777899999999999999999444433333333333
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.4e-07 Score=82.60 Aligned_cols=218 Identities=10% Similarity=0.025 Sum_probs=150.2
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DKTVALWDLR 180 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~ 180 (437)
|...|+-+.-. -.+++.+++.||.++.|......-.+.+..+..|-+.|.+++.+-++. ++.|.+. |..++++|+.
T Consensus 8 hrd~i~hv~~t--ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~-L~~Sv~d~Dhs~KvfDvE 84 (558)
T KOG0882|consen 8 HRDVITHVFPT--KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGW-LFRSVEDPDHSVKVFDVE 84 (558)
T ss_pred ccceeeeEeee--hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccce-eEeeccCcccceeEEEee
Confidence 44444444444 367899999999999998764223355667778899999999999888 6888777 9999999998
Q ss_pred CCcee-eeEeccCCCceEEEEEcCCCCc-EE-EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 181 NLKLK-LHSFESHKDEIFQVQWSPHNET-IL-ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 181 ~~~~~-~~~~~~h~~~v~~v~~~p~~~~-~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
+.... ...+....+.+. ...+|.... ++ ++.-.++.+.|+|-....+. ......-|..+|..+.
T Consensus 85 n~DminmiKL~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q------------~~~fkklH~sPV~~i~ 151 (558)
T KOG0882|consen 85 NFDMINMIKLVDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQ------------DGYFKKLHFSPVKKIR 151 (558)
T ss_pred ccchhhhcccccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCc------------cceecccccCceEEEE
Confidence 75542 122222223322 222332211 23 33446788999998876532 2344567899999999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCC------CCCceeee------eeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDST------DSDTKTMR------LDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~------~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
++|.+. .+++....|.|.-|..+. .+....+. ..........+..++|+|..+++-..|..
T Consensus 152 y~qa~D-s~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~Drk------ 224 (558)
T KOG0882|consen 152 YNQAGD-SAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRK------ 224 (558)
T ss_pred eecccc-ceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccE------
Confidence 999998 677888899999999873 11111111 11123345667799999999999998888
Q ss_pred ccccccccccchhhhhhhhhcC
Q psy4571 326 NYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 326 ~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
|++++..+|+.++.+..
T Consensus 225 -----VR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 225 -----VRGFVFKTGKLVQEIDE 241 (558)
T ss_pred -----EEEEEeccchhhhhhhc
Confidence 89999999988887744
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.9e-07 Score=56.82 Aligned_cols=38 Identities=21% Similarity=0.482 Sum_probs=35.1
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEe
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd 279 (437)
+++..+.+|.+.|++|+|+|++. ++++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~-~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGN-FLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSS-EEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccc-cceeeCCCCEEEEEC
Confidence 45678999999999999999988 899999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.2e-06 Score=79.03 Aligned_cols=235 Identities=11% Similarity=0.117 Sum_probs=158.3
Q ss_pred CCCeEEEecCceEEEEEeeeccc---cc-cCCCcceEEeeCCC-----------CCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 77 YVANISCILNISILFFEIIFTQN---FP-FPLSRQDVAWHLLH-----------ESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 77 ~~~~i~~~~~~~i~~~~~~~~~~---~~-~~~~v~~~~~sp~~-----------~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
..+.++.+....|.+-|....+. ++ ++..|+.+.|.|.. .-++|++...|.|.+||.. ....
T Consensus 25 ~~GLiAygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~---~~s~ 101 (1062)
T KOG1912|consen 25 PSGLIAYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV---LASV 101 (1062)
T ss_pred ccceEEEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh---hhhh
Confidence 34455555566667777544333 22 45688999998731 2367888889999999998 5566
Q ss_pred eeeeccCCCCeEEEEEeC---CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 142 SHTVDAHTAEVNCLSFNP---YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~---~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
+..+..|..++..++|-+ +.+++|+.-....+|.+|+..+++. ............|+.+.|-+..-+..-+..|.+
T Consensus 102 ~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k-~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~v 180 (1062)
T KOG1912|consen 102 INWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEK-FWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFV 180 (1062)
T ss_pred hhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCce-eeccccCCcceeeeeeCCCCcceEEEEccCceE
Confidence 667778888999999865 4556788888889999999999876 655555556677899999665445555667787
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccc-------------------------cEEEEEEccCCCeEEEEEeCCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-------------------------KISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~v~~l~~~p~~~~~l~s~~~dg 273 (437)
.+-+.-....... +.+.++....|.+ ..-.++|+|.-++.+ -.....
T Consensus 181 l~~~~l~~sep~~-------pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~l-fi~~pr 252 (1062)
T KOG1912|consen 181 LSCKDLGLSEPDV-------PGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNIL-FITFPR 252 (1062)
T ss_pred EEEeccCCCCCCC-------CceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceE-EEEecc
Confidence 7776654433221 2222222222221 012357788877554 334567
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC--cccccCCCCcccccccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS--STASESPTPTNSVHEKN 326 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~--~l~s~s~d~~~~~~~~~ 326 (437)
.+.++|++-..++..+..+ .++...+.+-|+++ .|+..-.+|.+.+|.+.
T Consensus 253 ellv~dle~~~~l~vvpie---r~~akfv~vlP~~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912|consen 253 ELLVFDLEYECCLAVVPIE---RGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred ceEEEcchhhceeEEEEec---cCCcceeEeccCCCcceEEEEecCCeEEEEEee
Confidence 7999999988888777764 45666667766665 67778888887777554
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-05 Score=70.67 Aligned_cols=217 Identities=11% Similarity=0.077 Sum_probs=131.0
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe-CCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
.+.+|.+.++.++.+-...+.|..|+..+. ....+... ....+++. +++. |+.+...+ +.++|..+++..
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~----~~~~~~~~--~~~G~~~~~~~g~--l~v~~~~~-~~~~d~~~g~~~ 73 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTG----EVEVIDLP--GPNGMAFDRPDGR--LYVADSGG-IAVVDPDTGKVT 73 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTT----EEEEEESS--SEEEEEEECTTSE--EEEEETTC-EEEEETTTTEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCC----eEEEEecC--CCceEEEEccCCE--EEEEEcCc-eEEEecCCCcEE
Confidence 367888866777777777899999999832 22222222 27778888 6654 55566555 455598886432
Q ss_pred -eeEec--c-CCCceEEEEEcCCCCcEEEEEeCC--------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 186 -LHSFE--S-HKDEIFQVQWSPHNETILASSGTD--------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 186 -~~~~~--~-h~~~v~~v~~~p~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
+.... . .....+.+++.|+|+ +.++.... |.|..++.. ++. ......-...
T Consensus 74 ~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~---------------~~~~~~~~~p 136 (246)
T PF08450_consen 74 VLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKV---------------TVVADGLGFP 136 (246)
T ss_dssp EEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEE---------------EEEEEEESSE
T ss_pred EEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeE---------------EEEecCcccc
Confidence 11221 1 335678999999998 56665543 456666666 211 1112223457
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeee-eeecccC--CceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMR-LDSIRSN--GGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~-~~~~~~~--~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.|+|+|+++.++++-+..+.|..+++..... +.... ....... .+-.+++..+|++.++.-..+.
T Consensus 137 NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~---------- 206 (246)
T PF08450_consen 137 NGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGR---------- 206 (246)
T ss_dssp EEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTE----------
T ss_pred cceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCE----------
Confidence 89999999997777888999999999974332 22111 1111111 2445688889988777655555
Q ss_pred ccccccchhhhhhhhhcCCCccccccCC-CCCC
Q psy4571 330 GLVLFDILVCEEQRQLLGTEEESSDRHS-SDND 361 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~~~h~~~~~~~~~-~~~~ 361 (437)
|.++|.. |+.+..+.-....++.++| -++.
T Consensus 207 -I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~ 237 (246)
T PF08450_consen 207 -IVVFDPD-GKLLREIELPVPRPTNCAFGGPDG 237 (246)
T ss_dssp -EEEEETT-SCEEEEEE-SSSSEEEEEEESTTS
T ss_pred -EEEECCC-ccEEEEEcCCCCCEEEEEEECCCC
Confidence 6777766 7777766444335566665 3443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=57.17 Aligned_cols=38 Identities=34% Similarity=0.746 Sum_probs=34.7
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
+++..+.+|.+.|.+++|+|++.. |++|+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~-~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNF-LASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSE-EEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEeccccc-ceeeCCCCEEEEEC
Confidence 356788999999999999999884 99999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.9e-06 Score=82.96 Aligned_cols=149 Identities=17% Similarity=0.235 Sum_probs=114.0
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC---------CCeEEEEeCCCCcee
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA---------DKTVALWDLRNLKLK 185 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~---------dg~i~lwd~~~~~~~ 185 (437)
+++.+.+|...|+|.+-|+. ..+.++++.+|++.|.++... |. +|++++. |..|++||++..+.
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~---s~~~iht~~aHs~siSDfDv~--GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmra- 258 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPN---SFETIHTFDAHSGSISDFDVQ--GN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRA- 258 (1118)
T ss_pred cCcEEEeecccceEEeecCC---cCceeeeeeccccceeeeecc--CC-eEEEeecccccccccccchhhhhhhhhhhc-
Confidence 57889999999999999999 678899999999999877664 66 5777764 66789999998665
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
+..+.-+.++ .-+.|+|.-...++.++..|...+-|..+.... ..-..........+.++.+++.++ .
T Consensus 259 l~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP----------~~~~~~v~p~~s~i~~fDiSsn~~-a 326 (1118)
T KOG1275|consen 259 LSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNP----------PAGVKMVNPNGSGISAFDISSNGD-A 326 (1118)
T ss_pred cCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCC----------ccceeEEccCCCcceeEEecCCCc-e
Confidence 4444444444 668899987667888899999999985443322 112233444455699999999999 8
Q ss_pred EEEEeCCCeEEEEeCCC
Q psy4571 266 ICSVSEDNIMQEYCDST 282 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~ 282 (437)
++.|..+|.|.+|--+.
T Consensus 327 lafgd~~g~v~~wa~~~ 343 (1118)
T KOG1275|consen 327 LAFGDHEGHVNLWADRP 343 (1118)
T ss_pred EEEecccCcEeeecCCC
Confidence 99999999999998443
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.50 E-value=8.3e-05 Score=78.05 Aligned_cols=224 Identities=13% Similarity=0.165 Sum_probs=134.5
Q ss_pred CceeEEEecCCCCeE-EEecCceEEEE----Eeeec--cc-cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC----
Q psy4571 67 PFLYDLVVNNYVANI-SCILNISILFF----EIIFT--QN-FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR---- 134 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i-~~~~~~~i~~~----~~~~~--~~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~---- 134 (437)
+.+.++.+....+.+ .+..+|.|.+. +.... +. =....+|.+++||| ++.+|+..+.+|++.+-+-.
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSP-D~Ella~vT~~~~l~~mt~~fd~i 154 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSP-DEELLALVTGEGNLLLMTRDFDPI 154 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECC-CcCEEEEEeCCCEEEEEeccceEE
Confidence 567777776666655 56678888888 32211 11 12567999999999 68888888888888775432
Q ss_pred C------C--CC--------CCCeeeecc------------------------CCCCeEEEEEeCCCCcEEEEEeC---C
Q psy4571 135 S------H--NV--------SKPSHTVDA------------------------HTAEVNCLSFNPYSEYILATGSA---D 171 (437)
Q Consensus 135 ~------~--~~--------~~~~~~~~~------------------------h~~~v~~l~~~~~~~~~l~sgs~---d 171 (437)
. . +. ++.-..|+| +...-..|+|-.||.+ +|+.+. +
T Consensus 155 ~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~y-FAVss~~~~~ 233 (928)
T PF04762_consen 155 SEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEY-FAVSSVEPET 233 (928)
T ss_pred EEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcE-EEEEEEEcCC
Confidence 0 0 00 000001100 2334567999999997 777764 3
Q ss_pred ---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC---CCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 172 ---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT---DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 172 ---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
..+++|+-+ +.. ..+...-.+--.+++|-|.|+ ++|+.-. ...|.+|.-.....- +....
T Consensus 234 ~~~R~iRVy~Re-G~L-~stSE~v~gLe~~l~WrPsG~-lIA~~q~~~~~~~VvFfErNGLrhg-----------eF~l~ 299 (928)
T PF04762_consen 234 GSRRVIRVYSRE-GEL-QSTSEPVDGLEGALSWRPSGN-LIASSQRLPDRHDVVFFERNGLRHG-----------EFTLR 299 (928)
T ss_pred CceeEEEEECCC-ceE-EeccccCCCccCCccCCCCCC-EEEEEEEcCCCcEEEEEecCCcEee-----------eEecC
Confidence 579999977 232 333333334446789999998 5776643 344667765443211 11111
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
+......|..+.|++++. +||..-.|. |.+|-..+..---..............+.|+|..
T Consensus 300 ~~~~~~~v~~l~Wn~ds~-iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~ 360 (928)
T PF04762_consen 300 FDPEEEKVIELAWNSDSE-ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEK 360 (928)
T ss_pred CCCCCceeeEEEECCCCC-EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCC
Confidence 224456899999999999 777766554 9999988765322222222222333446787743
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.9e-05 Score=72.37 Aligned_cols=153 Identities=15% Similarity=0.216 Sum_probs=100.8
Q ss_pred CcceEEeeCCCCCEEEEEE----CCCcE----EEEEcCCCCCCCCe-eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 105 SRQDVAWHLLHESLFGSVA----DDQKL----MIWDTRSHNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~----~dg~v----~vwd~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
..-++.||...++.+.+.. .+|.+ .+|++...+ .+.+ .+--.....|.|++++|+... ++.|+.||+|.
T Consensus 207 dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~k-lqrvsvtsipL~s~v~~ca~sp~E~k-LvlGC~DgSii 284 (545)
T PF11768_consen 207 DPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNK-LQRVSVTSIPLPSQVICCARSPSEDK-LVLGCEDGSII 284 (545)
T ss_pred CcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCc-eeEEEEEEEecCCcceEEecCcccce-EEEEecCCeEE
Confidence 3467888876666665542 24433 457765332 2222 122256778999999999996 99999999999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE--EecCccccE
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKI 253 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v 253 (437)
+||...+. .......-..+.++|+|+|. ++++|+..|.+.+||+.-......+......|...+. ..-.+....
T Consensus 285 LyD~~~~~---t~~~ka~~~P~~iaWHp~ga-i~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~~L 360 (545)
T PF11768_consen 285 LYDTTRGV---TLLAKAEFIPTLIAWHPDGA-IFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQLSKYFRVSSSL 360 (545)
T ss_pred EEEcCCCe---eeeeeecccceEEEEcCCCc-EEEEEcCCceEEEEEeecCccceeeccccCCCccEEeeehhccCcchh
Confidence 99998633 22334456679999999998 7999999999999999766544443332222222222 122345567
Q ss_pred EEEEEccCCC
Q psy4571 254 SDFSWNPNEP 263 (437)
Q Consensus 254 ~~l~~~p~~~ 263 (437)
..+.|.+...
T Consensus 361 ~~iqW~~~~~ 370 (545)
T PF11768_consen 361 VHIQWAPAPQ 370 (545)
T ss_pred heeEeccCCC
Confidence 7888886554
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-05 Score=72.63 Aligned_cols=305 Identities=11% Similarity=0.083 Sum_probs=181.0
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc---------eeEEEecCCCCeEEEe----------------cCc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------LYDLVVNNYVANISCI----------------LNI 87 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------~~~~~~~~~~~~i~~~----------------~~~ 87 (437)
..+.+...+++ |.|..++..-.. -|.+|...+.. ++.+.+++....++.- .+.
T Consensus 31 ~~~p~~~~~~S-P~G~~l~~~~~~-~V~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n 108 (561)
T COG5354 31 ENWPVAYVSES-PLGTYLFSEHAA-GVECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN 108 (561)
T ss_pred cCcchhheeec-Ccchheehhhcc-ceEEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence 45567788999 999888775433 47888855422 3333444444333221 223
Q ss_pred eEEEEEeeeccccc------cCCCcc-eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 88 SILFFEIIFTQNFP------FPLSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 88 ~i~~~~~~~~~~~~------~~~~v~-~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
.+.+||...++... .+.... -+.|+. ++.+.|=. ....+.|+++...-...+...++ ...|....|+|.
T Consensus 109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~-~D~y~ARv-v~~sl~i~e~t~n~~~~p~~~lr--~~gi~dFsisP~ 184 (561)
T COG5354 109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSI-DDKYVARV-VGSSLYIHEITDNIEEHPFKNLR--PVGILDFSISPE 184 (561)
T ss_pred ceeEEeccCceeEeeccccCCcccccceeeeee-cchhhhhh-ccCeEEEEecCCccccCchhhcc--ccceeeEEecCC
Confidence 58889977665432 122233 678888 45554433 34569999973221222333332 356888999997
Q ss_pred CCc-EEEE-----EeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe----------CCCeEEEEEcC
Q psy4571 161 SEY-ILAT-----GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG----------TDRRLHVWDLS 224 (437)
Q Consensus 161 ~~~-~l~s-----gs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~----------~dg~i~vwd~~ 224 (437)
+.+ .|+. ...++.+++|.+..+.. +.+..-.+..=..+.|++.|.++++-.- ....+.+++++
T Consensus 185 ~n~~~la~~tPEk~~kpa~~~i~sIp~~s~-l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 185 GNHDELAYWTPEKLNKPAMVRILSIPKNSV-LVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred CCCceEEEEccccCCCCcEEEEEEccCCCe-eeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence 432 2332 34578899999885443 3322212233356888999987554322 12457788877
Q ss_pred CCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE-EEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV-ICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
.... .....-.++|...+|.|.++.+ +++|..+..+.++|++.. +..+ . ....-....
T Consensus 264 e~~i---------------~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~-~---Pe~~rNT~~ 322 (561)
T COG5354 264 ERSI---------------PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFY-F---PEQKRNTIF 322 (561)
T ss_pred cccc---------------ceeccccccceeeeecccCCceeEEecccccceeecccccc--eEEe-c---CCccccccc
Confidence 4321 1122557899999999998743 445568899999999875 2222 1 233444568
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchhhhhhh-hhcCCCccccccCCCCCCcccccc-------------cc
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR-QLLGTEEESSDRHSSDNDTEDLNS-------------IW 369 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~-~~~~h~~~~~~~~~~~~~~~~~~~-------------~w 369 (437)
|||.+++++.++-+.. ...+-+||........ .+.|.. .+...++|++..+... +|
T Consensus 323 fsp~~r~il~agF~nl--------~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~ 392 (561)
T COG5354 323 FSPHERYILFAGFDNL--------QGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLW 392 (561)
T ss_pred ccCcccEEEEecCCcc--------ccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEE
Confidence 9999999988776643 1227788876654433 444432 3445688888765543 78
Q ss_pred ccCHHH
Q psy4571 370 SMTDEQ 375 (437)
Q Consensus 370 ~~~~~~ 375 (437)
++.+..
T Consensus 393 ~v~g~~ 398 (561)
T COG5354 393 DVYGAK 398 (561)
T ss_pred EecCch
Confidence 875543
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.9e-06 Score=82.80 Aligned_cols=154 Identities=18% Similarity=0.243 Sum_probs=112.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
...++|++++ +..|+-|+.+|.|++++... .+ .....|... ..+|.+ ++||+.||+|.|-.+-+.
T Consensus 39 ~D~is~~av~---~~~~~~GtH~g~v~~~~~~~----~~-~~~~~~s~~------~~~Gey-~asCS~DGkv~I~sl~~~ 103 (846)
T KOG2066|consen 39 NDAISCCAVH---DKFFALGTHRGAVYLTTCQG----NP-KTNFDHSSS------ILEGEY-VASCSDDGKVVIGSLFTD 103 (846)
T ss_pred hhHHHHHHhh---cceeeeccccceEEEEecCC----cc-ccccccccc------ccCCce-EEEecCCCcEEEeeccCC
Confidence 4567788886 47899999999999999872 22 333345443 667997 999999999999999886
Q ss_pred ceeeeEeccCCCceEEEEEcCC-----CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPH-----NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
+. ..++ ....++.+++++|+ .+ .+++||..| +.++.-+-.+.... + ....-.++|.++.
T Consensus 104 ~~-~~~~-df~rpiksial~Pd~~~~~sk-~fv~GG~ag-lvL~er~wlgnk~~-----------v-~l~~~eG~I~~i~ 167 (846)
T KOG2066|consen 104 DE-ITQY-DFKRPIKSIALHPDFSRQQSK-QFVSGGMAG-LVLSERNWLGNKDS-----------V-VLSEGEGPIHSIK 167 (846)
T ss_pred cc-ceeE-ecCCcceeEEeccchhhhhhh-heeecCcce-EEEehhhhhcCccc-----------e-eeecCccceEEEE
Confidence 65 3333 35689999999998 33 478999888 77776554433322 1 2445568999999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|. |. ++|-++.+| |++||..+.+.+..++.
T Consensus 168 W~--g~-lIAWand~G-v~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 168 WR--GN-LIAWANDDG-VKVYDTPTRQRLTNIPP 197 (846)
T ss_pred ec--Cc-EEEEecCCC-cEEEeccccceeeccCC
Confidence 95 55 787777666 89999998877665543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00021 Score=63.89 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=139.7
Q ss_pred EEeeCCCcceEEEeeccCc-eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCE
Q psy4571 40 LCVAEPFDDAVEERVINEE-YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~-v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~ 118 (437)
++.++.....++.+-.-|+ .-+||..++........+....+.. --.||| ++.+
T Consensus 10 ~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyG------------------------Hg~fs~-dG~~ 64 (305)
T PF07433_consen 10 VAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYG------------------------HGVFSP-DGRL 64 (305)
T ss_pred eeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEec------------------------CEEEcC-CCCE
Confidence 4555224555555655553 4567777777776665555544421 246888 5677
Q ss_pred EEEEEC-----CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe------------------CCCeEE
Q psy4571 119 FGSVAD-----DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS------------------ADKTVA 175 (437)
Q Consensus 119 l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs------------------~dg~i~ 175 (437)
|.+.-+ .|.|-|||... ..+.+..+..|.-....+.+.|||+. |+.+- .+-++.
T Consensus 65 LytTEnd~~~g~G~IgVyd~~~--~~~ri~E~~s~GIGPHel~l~pDG~t-LvVANGGI~Thpd~GR~kLNl~tM~psL~ 141 (305)
T PF07433_consen 65 LYTTENDYETGRGVIGVYDAAR--GYRRIGEFPSHGIGPHELLLMPDGET-LVVANGGIETHPDSGRAKLNLDTMQPSLV 141 (305)
T ss_pred EEEeccccCCCcEEEEEEECcC--CcEEEeEecCCCcChhhEEEcCCCCE-EEEEcCCCccCcccCceecChhhcCCceE
Confidence 766543 58899999983 45667777777777788999999975 55552 133445
Q ss_pred EEeCCCCceeeeE--e--ccCCCceEEEEEcCCCCcEEEEEeCCCe-------EEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 176 LWDLRNLKLKLHS--F--ESHKDEIFQVQWSPHNETILASSGTDRR-------LHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 176 lwd~~~~~~~~~~--~--~~h~~~v~~v~~~p~~~~~l~sg~~dg~-------i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
.-|..+++. +.. + ..|+..+..+++.++|. +++..-..|. |-+++.... ..... .+...
T Consensus 142 ~ld~~sG~l-l~q~~Lp~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g~~--~~~~~----~p~~~-- 211 (305)
T PF07433_consen 142 YLDARSGAL-LEQVELPPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRGGA--LRLLP----APEEQ-- 211 (305)
T ss_pred EEecCCCce-eeeeecCccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEcCCCc--ceecc----CChHH--
Confidence 555666554 332 3 33777899999999986 3333322221 333332221 11100 00000
Q ss_pred EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 245 ~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
...-...+-+|++++++..+.+|+-..+.+.+||..+++.+...... .+.-++..+++ ++++.+
T Consensus 212 -~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~-----D~cGva~~~~~-f~~ssG 275 (305)
T PF07433_consen 212 -WRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP-----DACGVAPTDDG-FLVSSG 275 (305)
T ss_pred -HHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC-----ceeeeeecCCc-eEEeCC
Confidence 11224578999999999977788889999999999999887766542 23334444555 444444
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.9e-05 Score=67.35 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=136.2
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCc-EEEEEcCCCCCCCCeeeeccCCCCe--EEEEEeCCCCcEEEEE----eCCCe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQK-LMIWDTRSHNVSKPSHTVDAHTAEV--NCLSFNPYSEYILATG----SADKT 173 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~~~h~~~v--~~l~~~~~~~~~l~sg----s~dg~ 173 (437)
+.+.....++.+|.....++.+-.-|+ ..+||..++ +....+....+.- -.-.|++||+.+++|- ...|.
T Consensus 2 ~lP~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g---~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~ 78 (305)
T PF07433_consen 2 PLPARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTG---QLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGV 78 (305)
T ss_pred CCCccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCC---ceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEE
Confidence 345667788899976777777777665 568899844 3333333322221 1357999999744442 33688
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe-------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
|-+||....-..+..+..|.-.-..+.+.|+|++ |+.+- ..|.-++ ++.+++..........+..-....+
T Consensus 79 IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~t-LvVANGGI~Thpd~GR~kL-Nl~tM~psL~~ld~~sG~ll~q~~L 156 (305)
T PF07433_consen 79 IGVYDAARGYRRIGEFPSHGIGPHELLLMPDGET-LVVANGGIETHPDSGRAKL-NLDTMQPSLVYLDARSGALLEQVEL 156 (305)
T ss_pred EEEEECcCCcEEEeEecCCCcChhhEEEcCCCCE-EEEEcCCCccCcccCceec-ChhhcCCceEEEecCCCceeeeeec
Confidence 9999999444447778777777788999999986 44431 1122222 3333332222111111111111223
Q ss_pred --cCccccEEEEEEccCCCeEEEEEeCCCe-------EEEEeCCCCCCceeeeee----ecccCCceeeeecCCCCcccc
Q psy4571 247 --GGHTAKISDFSWNPNEPWVICSVSEDNI-------MQEYCDSTDSDTKTMRLD----SIRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 247 --~~h~~~v~~l~~~p~~~~~l~s~~~dg~-------i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~s~~g~~l~s 313 (437)
.-|...++.+++.++|. .++..-..|. +-+++ .++....+... ....+-+-+++++++|..++.
T Consensus 157 p~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~ 233 (305)
T PF07433_consen 157 PPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAV 233 (305)
T ss_pred CccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEE
Confidence 34777899999999997 4544433222 33332 23223333221 112234556799999999988
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
.+..+.. +.+||..+|+.+....-
T Consensus 234 tsPrGg~----------~~~~d~~tg~~~~~~~l 257 (305)
T PF07433_consen 234 TSPRGGR----------VAVWDAATGRLLGSVPL 257 (305)
T ss_pred ECCCCCE----------EEEEECCCCCEeecccc
Confidence 8877765 89999999988765533
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.1e-05 Score=72.48 Aligned_cols=259 Identities=9% Similarity=-0.024 Sum_probs=143.5
Q ss_pred cceEEEeeccCceEeeecCCCcee-EEEecC--------CCCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeC
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLY-DLVVNN--------YVANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHL 113 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~--------~~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp 113 (437)
++.++.++.++.+..+|..+|.+. ...... ..+.+ ....++.+..+|...++.. .....+. -+|
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~---~~p 141 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVL---SPP 141 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceee---cCC
Confidence 567888888888888886655532 221111 12222 3446777888886555432 1111111 111
Q ss_pred C-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCe-----EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 114 L-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV-----NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 114 ~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
. .+..++.++.+|.|..+|.+++ +.+.........+ .+.... +. .++.+..+|.+..+|.++++. +.
T Consensus 142 ~v~~~~v~v~~~~g~l~a~d~~tG---~~~W~~~~~~~~~~~~~~~sp~~~--~~-~v~~~~~~g~v~ald~~tG~~-~W 214 (377)
T TIGR03300 142 LVANGLVVVRTNDGRLTALDAATG---ERLWTYSRVTPALTLRGSASPVIA--DG-GVLVGFAGGKLVALDLQTGQP-LW 214 (377)
T ss_pred EEECCEEEEECCCCeEEEEEcCCC---ceeeEEccCCCceeecCCCCCEEE--CC-EEEEECCCCEEEEEEccCCCE-ee
Confidence 1 2346667788999999999843 4333332221111 011112 23 377888899999999998765 33
Q ss_pred Eecc-CCC---c---eEEEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 188 SFES-HKD---E---IFQVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 188 ~~~~-h~~---~---v~~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
.... ... . ...+.-+| .+. .++.++.+|.++.+|..+++.... ... . ......
T Consensus 215 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~-~vy~~~~~g~l~a~d~~tG~~~W~--------------~~~-~-~~~~p~- 276 (377)
T TIGR03300 215 EQRVALPKGRTELERLVDVDGDPVVDGG-QVYAVSYQGRVAALDLRSGRVLWK--------------RDA-S-SYQGPA- 276 (377)
T ss_pred eeccccCCCCCchhhhhccCCccEEECC-EEEEEEcCCEEEEEECCCCcEEEe--------------ecc-C-CccCce-
Confidence 2211 000 0 00010011 233 366777899999999988753322 111 1 111122
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
..+. .++.++.||.+..+|..+++.+...... .... .......+..++.++.++. +.++|..+
T Consensus 277 -~~~~-~vyv~~~~G~l~~~d~~tG~~~W~~~~~---~~~~-~ssp~i~g~~l~~~~~~G~-----------l~~~d~~t 339 (377)
T TIGR03300 277 -VDDN-RLYVTDADGVVVALDRRSGSELWKNDEL---KYRQ-LTAPAVVGGYLVVGDFEGY-----------LHWLSRED 339 (377)
T ss_pred -EeCC-EEEEECCCCeEEEEECCCCcEEEccccc---cCCc-cccCEEECCEEEEEeCCCE-----------EEEEECCC
Confidence 2344 4667788999999999998765443210 0111 1111124567778888887 78889889
Q ss_pred hhhhhhhcCCCc
Q psy4571 339 CEEQRQLLGTEE 350 (437)
Q Consensus 339 ~~~~~~~~~h~~ 350 (437)
|+.+.++..+..
T Consensus 340 G~~~~~~~~~~~ 351 (377)
T TIGR03300 340 GSFVARLKTDGS 351 (377)
T ss_pred CCEEEEEEcCCC
Confidence 988877765543
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.5e-06 Score=81.46 Aligned_cols=185 Identities=16% Similarity=0.165 Sum_probs=126.5
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
++..+..|+-...+..+|+.+ .+..+...-..+.|.-+.. +++ .+.+|...|+|.+-|.++.+. +.++.+|.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~---~~e~r~~~v~a~~v~imR~--Nnr-~lf~G~t~G~V~LrD~~s~~~-iht~~aHs~ 218 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNT---EKETRTTNVSASGVTIMRY--NNR-NLFCGDTRGTVFLRDPNSFET-IHTFDAHSG 218 (1118)
T ss_pred CCcceeecchhhheeeeeccc---ceeeeeeeccCCceEEEEe--cCc-EEEeecccceEEeecCCcCce-eeeeecccc
Confidence 345666777778888899983 3444443333334554444 466 499999999999999999665 899999999
Q ss_pred ceEEEEEcCCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 195 EIFQVQWSPHNETILASSGT---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
.|.++.. .|+ +|+++|. |..|+|||+++....... .-+.+ ..-+.|+|.-...
T Consensus 219 siSDfDv--~GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI--------------~~~~~-P~flrf~Psl~t~ 280 (1118)
T KOG1275|consen 219 SISDFDV--QGN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI--------------QFPYG-PQFLRFHPSLTTR 280 (1118)
T ss_pred ceeeeec--cCC-eEEEeecccccccccccchhhhhhhhhhhccCCc--------------ccccC-chhhhhcccccce
Confidence 9987766 465 5777764 556899999997644331 11222 2456788877667
Q ss_pred EEEEeCCCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 266 ICSVSEDNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
++.++..|...+-|..+. .+......-.....+.....+|++|..++.|..++.+.+|.
T Consensus 281 ~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 281 LAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred EEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 888899999999884322 12111222222334466678999999999999999965554
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.2e-07 Score=78.99 Aligned_cols=157 Identities=9% Similarity=0.031 Sum_probs=113.0
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++.+.+-.|-+-|+.++-. +.+. ..+.|.++.|...++ ++..|+.+|.|.++|++....-. ..+..
T Consensus 228 fs~G~sqqv~L~nvetg~~--qsf~-sksDVfAlQf~~s~n-Lv~~GcRngeI~~iDLR~rnqG~---------~~~a~- 293 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ--QSFQ-SKSDVFALQFAGSDN-LVFNGCRNGEIFVIDLRCRNQGN---------GWCAQ- 293 (425)
T ss_pred ecccccceeEEEEeecccc--cccc-cchhHHHHHhcccCC-eeEecccCCcEEEEEeeecccCC---------CcceE-
Confidence 4555667788889988543 3333 677899999998887 79999999999999999862211 12222
Q ss_pred ecCccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCCCC---ceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 246 HGGHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTDSD---TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.-.|.+.|+++..-. +++ .|++.+.+|+|++||.+.-++ +.++..+. .......+-+.+....+++++.|=.
T Consensus 294 rlyh~Ssvtslq~Lq~s~q-~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHv-N~~a~l~~~v~~eeg~I~s~GdDcy-- 369 (425)
T KOG2695|consen 294 RLYHDSSVTSLQILQFSQQ-KLMASDMTGKIKLYDLRATKCKKSVMQYEGHV-NLSAYLPAHVKEEEGSIFSVGDDCY-- 369 (425)
T ss_pred EEEcCcchhhhhhhccccc-eEeeccCcCceeEeeehhhhcccceeeeeccc-ccccccccccccccceEEEccCeeE--
Confidence 235788899988766 666 677889999999999998777 55554422 2233344456677777778887766
Q ss_pred ccccccccccccccchhhhhhhhhcCCC
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.|+|.+..|.++.++.-..
T Consensus 370 ---------tRiWsl~~ghLl~tipf~~ 388 (425)
T KOG2695|consen 370 ---------TRIWSLDSGHLLCTIPFPY 388 (425)
T ss_pred ---------EEEEecccCceeeccCCCC
Confidence 7999999999888875544
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.1e-06 Score=74.35 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=101.5
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
...|.+++|+|.+..++..++.+.+|.|.|++ ....+..+..+ ..+++++|.-+..+.|..|-..|.|.++|++..
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~nkiki~dle---t~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGNKIKIMDLE---TSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred chhhhhhccCccccceeeeeccCceEEEEecc---cceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 45789999999888899999999999999999 44556666666 789999999988888999999999999999987
Q ss_pred ceeeeEecc--CCCceEEEEEcC------CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 183 KLKLHSFES--HKDEIFQVQWSP------HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 183 ~~~~~~~~~--h~~~v~~v~~~p------~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+.++..+.+ ...+|..++.-+ .+. +++....+ +..|+......... ++.. -+..+.+.
T Consensus 269 ~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt~--l~f~ei~~s~~~~p----------~vle-le~pG~ci 334 (463)
T KOG1645|consen 269 EGPLMELVANVTINPVHKIAPVQPNKIFTSGG-LLVFALTV--LQFYEIVFSAECLP----------CVLE-LEPPGICI 334 (463)
T ss_pred CchHhhhhhhhccCcceeecccCccccccccc-eEEeeehh--hhhhhhhccccCCC----------cccc-cCCCccee
Confidence 765554433 234565555433 232 34433332 55676654332111 1111 12244566
Q ss_pred EEEEccCCCeEEEEEeC
Q psy4571 255 DFSWNPNEPWVICSVSE 271 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~ 271 (437)
+++.++..+.+++|--.
T Consensus 335 smqy~~~snh~l~tyRs 351 (463)
T KOG1645|consen 335 SMQYHGVSNHLLLTYRS 351 (463)
T ss_pred eeeecCccceEEEEecC
Confidence 66666655656665543
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.27 E-value=7.4e-06 Score=77.84 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=71.6
Q ss_pred ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 99 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.++.+..+.|++++| ++..|+.|+.||.|.+||...+ +..+....-.++.++|+|+|. ++++|+..|.+.+||
T Consensus 255 sipL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~-----~t~~~ka~~~P~~iaWHp~ga-i~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 255 SIPLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRG-----VTLLAKAEFIPTLIAWHPDGA-IFVVGSEQGELQCFD 327 (545)
T ss_pred EEecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCC-----eeeeeeecccceEEEEcCCCc-EEEEEcCCceEEEEE
Confidence 456788999999999 6889999999999999998732 222223455688999999999 699999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEc
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWS 202 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~ 202 (437)
+.-.....+.+..-..+-..+.++
T Consensus 328 ~ALspi~~qLlsEd~~P~~~L~Ls 351 (545)
T PF11768_consen 328 MALSPIKMQLLSEDATPKSTLQLS 351 (545)
T ss_pred eecCccceeeccccCCCccEEeee
Confidence 986444344333323333344444
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00024 Score=65.76 Aligned_cols=198 Identities=10% Similarity=0.037 Sum_probs=128.1
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEec-C-----------------------CCCeEEEecCceEEEEEeeec--c
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVN-N-----------------------YVANISCILNISILFFEIIFT--Q 98 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~-~-----------------------~~~~i~~~~~~~i~~~~~~~~--~ 98 (437)
.++++|+- +.-|.|-++|..+..+..+... + .++.++...-|..-+.+...+ -
T Consensus 276 sDGkrIvF-q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~i 354 (668)
T COG4946 276 SDGKRIVF-QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSI 354 (668)
T ss_pred CCCcEEEE-ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeE
Confidence 44555543 3456677888666554444332 1 123333444444444443222 2
Q ss_pred ccccCCCcceEEeeCCCCCEEEEEECCC-cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 99 NFPFPLSRQDVAWHLLHESLFGSVADDQ-KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 99 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
+...+..|.-..+.-+ +.-++.|..|| .+-|+|.+. .....+...-+.|.++..+|+|++ ++.+.....|.+.
T Consensus 355 qv~~~~~VrY~r~~~~-~e~~vigt~dgD~l~iyd~~~----~e~kr~e~~lg~I~av~vs~dGK~-~vvaNdr~el~vi 428 (668)
T COG4946 355 QVGKKGGVRYRRIQVD-PEGDVIGTNDGDKLGIYDKDG----GEVKRIEKDLGNIEAVKVSPDGKK-VVVANDRFELWVI 428 (668)
T ss_pred EcCCCCceEEEEEccC-CcceEEeccCCceEEEEecCC----ceEEEeeCCccceEEEEEcCCCcE-EEEEcCceEEEEE
Confidence 3344556777777763 44778899999 899999983 334555666788999999999996 8888888889999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC----eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
|++++.. ...-+...+-|+.++|+|+++ ++|-+--+| .|+++|+.+++.... .+..+| =
T Consensus 429 didngnv-~~idkS~~~lItdf~~~~nsr-~iAYafP~gy~tq~Iklydm~~~Kiy~v------------TT~ta~---D 491 (668)
T COG4946 429 DIDNGNV-RLIDKSEYGLITDFDWHPNSR-WIAYAFPEGYYTQSIKLYDMDGGKIYDV------------TTPTAY---D 491 (668)
T ss_pred EecCCCe-eEecccccceeEEEEEcCCce-eEEEecCcceeeeeEEEEecCCCeEEEe------------cCCccc---c
Confidence 9999764 222233457799999999998 488776555 599999988653221 112222 2
Q ss_pred EEEEEccCCCeEE
Q psy4571 254 SDFSWNPNEPWVI 266 (437)
Q Consensus 254 ~~l~~~p~~~~~l 266 (437)
.+-+|.|+++++.
T Consensus 492 fsPaFD~d~ryLY 504 (668)
T COG4946 492 FSPAFDPDGRYLY 504 (668)
T ss_pred cCcccCCCCcEEE
Confidence 4457888888543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.8e-05 Score=74.92 Aligned_cols=156 Identities=15% Similarity=0.285 Sum_probs=116.3
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC-----------CCcEEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-----------SEYILATGSADK 172 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-----------~~~~l~sgs~dg 172 (437)
..-.++.|+| +.++|-|+ ...|.+-|.. ..+.++.+..|...|+.+.|.|. ..-+||++...|
T Consensus 16 sN~~A~Dw~~--~GLiAygs-hslV~VVDs~---s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~G 89 (1062)
T KOG1912|consen 16 SNRNAADWSP--SGLIAYGS-HSLVSVVDSR---SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISG 89 (1062)
T ss_pred ccccccccCc--cceEEEec-CceEEEEehh---hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccC
Confidence 3456889998 45777666 4568888988 67788888899999999999873 223688889999
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcCC---CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPH---NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.|.+||...... +..+..|..++..++|.|. .+.+|+.-.....+.+|+..+++.... ....
T Consensus 90 rIil~d~~~~s~-~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk--------------~~ys 154 (1062)
T KOG1912|consen 90 RIILVDFVLASV-INWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWK--------------YDYS 154 (1062)
T ss_pred cEEEEEehhhhh-hhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeec--------------cccC
Confidence 999999998555 6678888999999999763 445677777788999999999865433 3444
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
.....|+.+.|-...-+..-+..|.+-+-+.
T Consensus 155 ~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~ 185 (1062)
T KOG1912|consen 155 HEILSCFRVDPFDSRHFCVLGSKGFVLSCKD 185 (1062)
T ss_pred CcceeeeeeCCCCcceEEEEccCceEEEEec
Confidence 4567778888866534445555666666654
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.0001 Score=72.89 Aligned_cols=156 Identities=13% Similarity=0.110 Sum_probs=101.7
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC-eEEEEEeCCCCcEEEEEeCCCe-----EEEEeCCCC-
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE-VNCLSFNPYSEYILATGSADKT-----VALWDLRNL- 182 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~sgs~dg~-----i~lwd~~~~- 182 (437)
+|++ ++..++.|+.+|.|.+.+-. .+.++.++++... |..+ +.-+++.+|++-++|+. +++||++..
T Consensus 30 c~~s-~~~~vvigt~~G~V~~Ln~s----~~~~~~fqa~~~siv~~L-~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 30 CCSS-STGSVVIGTADGRVVILNSS----FQLIRGFQAYEQSIVQFL-YILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred EEcC-CCceEEEeeccccEEEeccc----ceeeehheecchhhhhHh-hcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 4556 67889999999999888764 4555777777776 4444 44445445777777654 999999753
Q ss_pred ----ceee--eEecc-----CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 183 ----KLKL--HSFES-----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 183 ----~~~~--~~~~~-----h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
..++ ..+.. ...++.+++.+.+-. .+|.|-.||.|..+.-.-...... +. .....-..
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~-~Iv~Gf~nG~V~~~~GDi~RDrgs---------r~-~~~~~~~~ 172 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLK-TIVCGFTNGLVICYKGDILRDRGS---------RQ-DYSHRGKE 172 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEcccc-EEEEEecCcEEEEEcCcchhcccc---------ce-eeeccCCC
Confidence 1222 11222 245788999999877 589999999998885432221111 11 11223357
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+|+++++..++...+ -...-..|.+|.+...
T Consensus 173 pITgL~~~~d~~s~l-Fv~Tt~~V~~y~l~gr 203 (933)
T KOG2114|consen 173 PITGLALRSDGKSVL-FVATTEQVMLYSLSGR 203 (933)
T ss_pred CceeeEEecCCceeE-EEEecceeEEEEecCC
Confidence 999999999998532 2333457999999843
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.4e-05 Score=72.01 Aligned_cols=96 Identities=16% Similarity=0.295 Sum_probs=79.4
Q ss_pred EEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc
Q psy4571 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 128 v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 207 (437)
+++.+.. ..+....+.+|...|.+++|+|...-++..++.+..|+|.|+++.. .+..+..+ ..+.+++|.-+..+
T Consensus 175 v~~l~~~---~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~-~vssy~a~-~~~wSC~wDlde~h 249 (463)
T KOG1645|consen 175 VQKLESH---DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC-VVSSYIAY-NQIWSCCWDLDERH 249 (463)
T ss_pred eEEeccC---CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccce-eeeheecc-CCceeeeeccCCcc
Confidence 5555555 3444556677888999999999888779999999999999999944 37777766 88999999999888
Q ss_pred EEEEEeCCCeEEEEEcCCCCC
Q psy4571 208 ILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~~~~ 228 (437)
.+..|...|.|.|||++..+.
T Consensus 250 ~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 250 VIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred eeEEeccCceEEEEEccCCCc
Confidence 899999999999999998653
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0002 Score=63.41 Aligned_cols=194 Identities=13% Similarity=0.028 Sum_probs=106.4
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE-eccCC-
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-FESHK- 193 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~h~- 193 (437)
++.+++++.++.|..||..+ ++.+..... .+++...... .+. .++.++.++.+..+|..+++. +.. .....
T Consensus 36 ~~~v~~~~~~~~l~~~d~~t---G~~~W~~~~-~~~~~~~~~~-~~~-~v~v~~~~~~l~~~d~~tG~~-~W~~~~~~~~ 108 (238)
T PF13360_consen 36 GGRVYVASGDGNLYALDAKT---GKVLWRFDL-PGPISGAPVV-DGG-RVYVGTSDGSLYALDAKTGKV-LWSIYLTSSP 108 (238)
T ss_dssp TTEEEEEETTSEEEEEETTT---SEEEEEEEC-SSCGGSGEEE-ETT-EEEEEETTSEEEEEETTTSCE-EEEEEE-SSC
T ss_pred CCEEEEEcCCCEEEEEECCC---CCEEEEeec-cccccceeee-ccc-ccccccceeeeEecccCCcce-eeeecccccc
Confidence 55666778999999999984 454444433 2221111222 244 377777899999999999776 444 22221
Q ss_pred --CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE-EEEEEccCCCeEEEEEe
Q psy4571 194 --DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI-SDFSWNPNEPWVICSVS 270 (437)
Q Consensus 194 --~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~~~p~~~~~l~s~~ 270 (437)
...........+. .++.+..++.|..+|+++++...............+. ....+ ..+.+. ++ .+..++
T Consensus 109 ~~~~~~~~~~~~~~~-~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~--~v~~~~ 180 (238)
T PF13360_consen 109 PAGVRSSSSPAVDGD-RLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS----SFSDINGSPVIS-DG--RVYVSS 180 (238)
T ss_dssp TCSTB--SEEEEETT-EEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE----EETTEEEEEECC-TT--EEEEEC
T ss_pred ccccccccCceEecC-EEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee----eecccccceEEE-CC--EEEEEc
Confidence 1112222222355 4677777999999999988654332110000000000 00111 222222 34 344566
Q ss_pred CCCe-EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 271 EDNI-MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 271 ~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.++. +.+ |+.+++.+ +.. . .........+++..++.++.++. +..||..+|+.+
T Consensus 181 ~~g~~~~~-d~~tg~~~--w~~---~-~~~~~~~~~~~~~~l~~~~~~~~-----------l~~~d~~tG~~~ 235 (238)
T PF13360_consen 181 GDGRVVAV-DLATGEKL--WSK---P-ISGIYSLPSVDGGTLYVTSSDGR-----------LYALDLKTGKVV 235 (238)
T ss_dssp CTSSEEEE-ETTTTEEE--EEE---C-SS-ECECEECCCTEEEEEETTTE-----------EEEEETTTTEEE
T ss_pred CCCeEEEE-ECCCCCEE--EEe---c-CCCccCCceeeCCEEEEEeCCCE-----------EEEEECCCCCEE
Confidence 6664 555 99998743 221 1 11222235677777777777777 899999998754
|
... |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00013 Score=71.67 Aligned_cols=176 Identities=10% Similarity=0.079 Sum_probs=121.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe-----cCCCCeE-EEecCceEEEEEeeeccc---cccCC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV-----NNYVANI-SCILNISILFFEIIFTQN---FPFPL 104 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~-----~~~~~~i-~~~~~~~i~~~~~~~~~~---~~~~~ 104 (437)
..-++|++++ +..++-|..+|.+.+.+.+... ...+ ...++.+ +|+.||++.+..+...+. +.+..
T Consensus 39 ~D~is~~av~---~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~r 113 (846)
T KOG2066|consen 39 NDAISCCAVH---DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKR 113 (846)
T ss_pred hhHHHHHHhh---cceeeeccccceEEEEecCCcc--cccccccccccCCceEEEecCCCcEEEeeccCCccceeEecCC
Confidence 4446666666 6789999999999999876543 1112 2245555 899999999988766654 45788
Q ss_pred CcceEEeeCC----CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 105 SRQDVAWHLL----HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 105 ~v~~~~~sp~----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
++.+++++|+ ..+.+++|+.-| +.++.-.=-+....+ .+....++|.++.|. |. ++|-++.+| |+++|..
T Consensus 114 piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~--g~-lIAWand~G-v~vyd~~ 187 (846)
T KOG2066|consen 114 PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR--GN-LIAWANDDG-VKVYDTP 187 (846)
T ss_pred cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--Cc-EEEEecCCC-cEEEecc
Confidence 9999999995 357889999988 777654311111122 455667899999997 55 588888777 9999999
Q ss_pred CCceeeeEeccCCC------ceEEEEEcCCCCcEEEEEeCCCeEEEEEcC
Q psy4571 181 NLKLKLHSFESHKD------EIFQVQWSPHNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 181 ~~~~~~~~~~~h~~------~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~ 224 (437)
+.+. +..+..... --..+.|.++.+ |+.|= ..+|+|..++
T Consensus 188 ~~~~-l~~i~~p~~~~R~e~fpphl~W~~~~~--LVIGW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 188 TRQR-LTNIPPPSQSVRPELFPPHLHWQDEDR--LVIGW-GDSVKICSIK 233 (846)
T ss_pred ccce-eeccCCCCCCCCcccCCCceEecCCCe--EEEec-CCeEEEEEEe
Confidence 8554 433322112 235678887764 55654 4578998888
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.8e-05 Score=72.12 Aligned_cols=189 Identities=14% Similarity=0.177 Sum_probs=113.4
Q ss_pred CcceEEeeCCCCCEEEEEECC---CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE--eC
Q psy4571 105 SRQDVAWHLLHESLFGSVADD---QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW--DL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw--d~ 179 (437)
.+..-+|+|+...+....-.. ..+.++|+..+. ...+..+.++. ..-+|+|||++++++...||...|| |+
T Consensus 194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~-~~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~dl 269 (425)
T COG0823 194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGK-RPVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLMDL 269 (425)
T ss_pred ceeccccCcCCCceEEEEEecCCCceEEEEeccCCc-cceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEEcC
Confidence 455677888554433332222 358899998653 23334444443 4578999999988899999886655 55
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEE--EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.... ...+....+.-..=.|+|+|++++.+.+..|.-.|| ++....... .+..+-. -..-.
T Consensus 270 ~~~~--~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~r-------------iT~~~~~--~~~p~ 332 (425)
T COG0823 270 DGKN--LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTR-------------LTFSGGG--NSNPV 332 (425)
T ss_pred CCCc--ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeE-------------eeccCCC--CcCcc
Confidence 5533 334443334444678999999988888888875555 444432211 1122222 22677
Q ss_pred EccCCCeEEEEEeCCCe--EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 258 WNPNEPWVICSVSEDNI--MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
|+|||++++.....+|. |.+.|+.++...+.+. .........+.|+|+.+...+..+
T Consensus 333 ~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt----~~~~~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 333 WSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT----STYLNESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred CCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc----ccccCCCCCcCCCCceEEEeccCC
Confidence 99999966655544455 6777776665433332 122233457888888776555443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0011 Score=66.02 Aligned_cols=206 Identities=13% Similarity=0.155 Sum_probs=123.5
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 119 (437)
-|++ +.+..++.|+.+|.|-+.+..-....+.- . ++.++-..-|.-++.++|
T Consensus 29 sc~~-s~~~~vvigt~~G~V~~Ln~s~~~~~~fq--a-------------------------~~~siv~~L~~~~~~~~L 80 (933)
T KOG2114|consen 29 SCCS-SSTGSVVIGTADGRVVILNSSFQLIRGFQ--A-------------------------YEQSIVQFLYILNKQNFL 80 (933)
T ss_pred eEEc-CCCceEEEeeccccEEEecccceeeehhe--e-------------------------cchhhhhHhhcccCceEE
Confidence 3555 77788888888887666553222211111 0 111111122222233566
Q ss_pred EEEECCC-----cEEEEEcCCCCCCC---Ce--eeecc-----CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC--
Q psy4571 120 GSVADDQ-----KLMIWDTRSHNVSK---PS--HTVDA-----HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL-- 182 (437)
Q Consensus 120 ~~~~~dg-----~v~vwd~~~~~~~~---~~--~~~~~-----h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~-- 182 (437)
++.+.|+ .|+||+++..+... .+ ..... .+.++.+++.+.+-. .+|.|-.+|.|..+.-+-.
T Consensus 81 ~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~-~Iv~Gf~nG~V~~~~GDi~RD 159 (933)
T KOG2114|consen 81 FSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLK-TIVCGFTNGLVICYKGDILRD 159 (933)
T ss_pred EEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEcccc-EEEEEecCcEEEEEcCcchhc
Confidence 6665554 48999997542222 22 11222 245789999999877 5999999999999854321
Q ss_pred c-eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 K-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
+ ........-..+|+.+++..++..++..+ .-..|.+|.+.... + .+.....|.....|.++++.
T Consensus 160 rgsr~~~~~~~~~pITgL~~~~d~~s~lFv~-Tt~~V~~y~l~gr~-p------------~~~~ld~~G~~lnCss~~~~ 225 (933)
T KOG2114|consen 160 RGSRQDYSHRGKEPITGLALRSDGKSVLFVA-TTEQVMLYSLSGRT-P------------SLKVLDNNGISLNCSSFSDG 225 (933)
T ss_pred cccceeeeccCCCCceeeEEecCCceeEEEE-ecceeEEEEecCCC-c------------ceeeeccCCccceeeecCCC
Confidence 1 11222233467899999998888633333 34579999998532 1 13446777888999999887
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.. .+++++ +..+.+|+....+.-..+.
T Consensus 226 t~-qfIca~-~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 226 TY-QFICAG-SEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred Cc-cEEEec-CceEEEEcCCCcceeeeec
Confidence 66 343443 4569999988655544444
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.0011 Score=63.31 Aligned_cols=238 Identities=9% Similarity=-0.070 Sum_probs=130.0
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEec----------CCCCeEEEecCceEEEEEeeecccc---ccCCCc------c
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVN----------NYVANISCILNISILFFEIIFTQNF---PFPLSR------Q 107 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~----------~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v------~ 107 (437)
+..++.++.|+.+..+|..++.+.-.... .....+....++.+..+|...++.. ...... .
T Consensus 105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~ 184 (377)
T TIGR03300 105 GGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSA 184 (377)
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCC
Confidence 56677888888888888766554311110 1122234456778888887655432 111111 1
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-C-C-----C---e-EEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-T-A-----E---V-NCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~-~-----~---v-~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
..... +..++.+..+|.+..+|++++. .+...... . + . + ..... .+. .++.++.+|.+..
T Consensus 185 sp~~~---~~~v~~~~~~g~v~ald~~tG~---~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~-~vy~~~~~g~l~a 255 (377)
T TIGR03300 185 SPVIA---DGGVLVGFAGGKLVALDLQTGQ---PLWEQRVALPKGRTELERLVDVDGDPVV--DGG-QVYAVSYQGRVAA 255 (377)
T ss_pred CCEEE---CCEEEEECCCCEEEEEEccCCC---EeeeeccccCCCCCchhhhhccCCccEE--ECC-EEEEEEcCCEEEE
Confidence 11121 2466778888999999988543 22211100 0 0 0 0 01111 244 3777888999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
+|.++++. +.... .. ....... .+.+ ++.++.||.+..+|..+++...+.. .+.+ ....+.
T Consensus 256 ~d~~tG~~-~W~~~-~~-~~~~p~~--~~~~-vyv~~~~G~l~~~d~~tG~~~W~~~-----------~~~~--~~~ssp 316 (377)
T TIGR03300 256 LDLRSGRV-LWKRD-AS-SYQGPAV--DDNR-LYVTDADGVVVALDRRSGSELWKND-----------ELKY--RQLTAP 316 (377)
T ss_pred EECCCCcE-EEeec-cC-CccCceE--eCCE-EEEECCCCeEEEEECCCCcEEEccc-----------cccC--CccccC
Confidence 99998765 43332 11 1112222 3443 6677789999999998875433210 0001 111111
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.. .+. .++.++.+|.++++|..+++.+..+.... ......-...++ .|..++.||.
T Consensus 317 ~i--~g~-~l~~~~~~G~l~~~d~~tG~~~~~~~~~~---~~~~~sp~~~~~-~l~v~~~dG~ 372 (377)
T TIGR03300 317 AV--VGG-YLVVGDFEGYLHWLSREDGSFVARLKTDG---SGIASPPVVVGD-GLLVQTRDGD 372 (377)
T ss_pred EE--ECC-EEEEEeCCCEEEEEECCCCCEEEEEEcCC---CccccCCEEECC-EEEEEeCCce
Confidence 12 344 57788999999999999998877665421 111111112233 3666666766
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00037 Score=61.36 Aligned_cols=204 Identities=8% Similarity=0.118 Sum_probs=113.7
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..++.++|+|+++.++++....+.|..++.+ ++.++...-. .+..-.|++..++.+ +++.-.++.+.++++...
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~----G~vlr~i~l~g~~D~EgI~y~g~~~~-vl~~Er~~~L~~~~~~~~ 96 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD----GKVLRRIPLDGFGDYEGITYLGNGRY-VLSEERDQRLYIFTIDDD 96 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT------EEEEEE-SS-SSEEEEEE-STTEE-EEEETTTTEEEEEEE---
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC----CCEEEEEeCCCCCCceeEEEECCCEE-EEEEcCCCcEEEEEEecc
Confidence 4588999999777788888888888777764 3455544322 356888999877763 555445899999988432
Q ss_pred ce--e---eeEe-----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc
Q psy4571 183 KL--K---LHSF-----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252 (437)
Q Consensus 183 ~~--~---~~~~-----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (437)
.. . ...+ ..++..+-.++|.|.++.++ .+-......+|.+............ ....+.........
T Consensus 97 ~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~-v~kE~~P~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d 172 (248)
T PF06977_consen 97 TTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLF-VAKERKPKRLYEVNGFPGGFDLFVS---DDQDLDDDKLFVRD 172 (248)
T ss_dssp -TT--EEEEEEEE---S---SS--EEEEEETTTTEEE-EEEESSSEEEEEEESTT-SS--EEE---E-HHHH-HT--SS-
T ss_pred ccccchhhceEEecccccCCCcceEEEEEcCCCCEEE-EEeCCCChhhEEEccccCccceeec---cccccccccceecc
Confidence 11 0 1111 13456789999999887655 4555556677776652100000000 00000001122345
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc------CCceeeeecCCCCcccccCCC
Q psy4571 253 ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS------NGGISSTASPTASSTASESPT 317 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~s~~g~~l~s~s~d 317 (437)
+.+++++|....+++....+..|..+| .+|+....+.+....+ ..+--+++.++|++.++.-.+
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpN 242 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPN 242 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTT
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCc
Confidence 799999999887888899999999999 6677777666544222 134456899999887776544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=2e-06 Score=81.88 Aligned_cols=168 Identities=18% Similarity=0.307 Sum_probs=108.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEEC----CCcEEEEEcCCCCC-CCCeeeecc-CCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVAD----DQKLMIWDTRSHNV-SKPSHTVDA-HTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~----dg~v~vwd~~~~~~-~~~~~~~~~-h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
++...+++++|++.+.+.||+|-. |..+.|||+.+.-+ .+....+.+ ......+++|..+.+ ++.+|.....+
T Consensus 100 ~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~k-lvlaGm~sr~~ 178 (783)
T KOG1008|consen 100 GYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTK-LVLAGMTSRSV 178 (783)
T ss_pred cccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcc-hhhcccccchh
Confidence 345789999999988889988743 56799999985411 111112222 344567899997777 69999999999
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEE-cCCCCCCCCCCCCCCCCCceEEEecCcccc
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWD-LSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (437)
.++|++........+ .+..+..+...| .+.+ +++ ..||.|.+|| .++.+.... ..+.........
T Consensus 179 ~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY-~cs-~~dg~iAiwD~~rnienpl~---------~i~~~~N~~~~~ 245 (783)
T KOG1008|consen 179 HIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNY-FCS-NSDGDIAIWDTYRNIENPLQ---------IILRNENKKPKQ 245 (783)
T ss_pred hhhhhhhhhhhhhhh--hhhhcccceecCCCCCc-eec-cccCceeeccchhhhccHHH---------HHhhCCCCcccc
Confidence 999999522212222 234567788888 4443 544 5599999999 443322111 000001111235
Q ss_pred EEEEEEccCCCeEEEEEeCC-CeEEEEeCCC
Q psy4571 253 ISDFSWNPNEPWVICSVSED-NIMQEYCDST 282 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~d-g~i~iwd~~~ 282 (437)
+..++|+|....++++...| ++|+.+|+..
T Consensus 246 l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 246 LFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred eeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 88999999877677777654 8899999863
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.8e-06 Score=78.83 Aligned_cols=229 Identities=16% Similarity=0.234 Sum_probs=134.0
Q ss_pred CCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCC-eEEEe-----cCceEEEEEeeecccccc---
Q psy4571 45 PFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVA-NISCI-----LNISILFFEIIFTQNFPF--- 102 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~-~i~~~-----~~~~i~~~~~~~~~~~~~--- 102 (437)
-+..+++.|+.+|.|-+-... ...+..++|.+-.. .++++ .+..+.+||....-..|.
T Consensus 68 ~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~ 147 (783)
T KOG1008|consen 68 NDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESP 147 (783)
T ss_pred CchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccc
Confidence 445788999999988876621 12355555554432 23333 455799999765522221
Q ss_pred ------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEE
Q psy4571 103 ------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVA 175 (437)
Q Consensus 103 ------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~ 175 (437)
-...+.++|-. +..++.+|.....+.++|++.. ......-.+..+..+...| .+.+ ++ ...||.|.
T Consensus 148 ~fs~~~l~gqns~cwlr-d~klvlaGm~sr~~~ifdlRqs----~~~~~svnTk~vqG~tVdp~~~nY-~c-s~~dg~iA 220 (783)
T KOG1008|consen 148 LFSSSTLDGQNSVCWLR-DTKLVLAGMTSRSVHIFDLRQS----LDSVSSVNTKYVQGITVDPFSPNY-FC-SNSDGDIA 220 (783)
T ss_pred ccccccccCcccccccc-Ccchhhcccccchhhhhhhhhh----hhhhhhhhhhhcccceecCCCCCc-ee-ccccCcee
Confidence 23567888885 7888999999999999999832 1111112233566778888 4443 54 45599999
Q ss_pred EEe-CCCCceeeeEeccCCC----ceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--
Q psy4571 176 LWD-LRNLKLKLHSFESHKD----EIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-- 247 (437)
Q Consensus 176 lwd-~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (437)
+|| .+..+.++..+...+. .+..++|+|....++++...| ++|+.+|+.........+.........-+.++
T Consensus 221 iwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~~s~~~~q~~ 300 (783)
T KOG1008|consen 221 IWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNYESKYPVQPN 300 (783)
T ss_pred eccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccCCcccccccceeeeccccccccc
Confidence 999 5554554544433333 489999999876678877765 57999998764433222111000000000111
Q ss_pred CccccEEEEEEccCCC-eEEEEEeCCCeEEEEeC
Q psy4571 248 GHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCD 280 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~ 280 (437)
+.-+.|.+..|++..+ .....+-.+-.+.-+++
T Consensus 301 ~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~V 334 (783)
T KOG1008|consen 301 SQCSGIDFFTWHTASPTERQILGVINLQPKDFSV 334 (783)
T ss_pred ccccceeecCcCcCCccceeEEeeccCChhhccc
Confidence 1124677777777552 22334444444444443
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00096 Score=67.76 Aligned_cols=101 Identities=19% Similarity=0.170 Sum_probs=74.1
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCee-eec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSH-TVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.-+.|-.+..+..||++-.+ .+.+. ..+ .......|++-..+|. ||.|+.+|.|||||- .+......+.+...
T Consensus 544 ~tflGls~n~lfriDpR~~~-~k~v~~~~k~Y~~~~~Fs~~aTt~~G~--iavgs~~G~IRLyd~-~g~~AKT~lp~lG~ 619 (794)
T PF08553_consen 544 QTFLGLSDNSLFRIDPRLSG-NKLVDSQSKQYSSKNNFSCFATTEDGY--IAVGSNKGDIRLYDR-LGKRAKTALPGLGD 619 (794)
T ss_pred ceEEEECCCceEEeccCCCC-CceeeccccccccCCCceEEEecCCce--EEEEeCCCcEEeecc-cchhhhhcCCCCCC
Confidence 34467888899999998543 22221 111 2345688888888775 999999999999994 33444556677789
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcC
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~ 224 (437)
+|..|..+.||+++|+|| +..+.+++..
T Consensus 620 pI~~iDvt~DGkwilaTc--~tyLlLi~t~ 647 (794)
T PF08553_consen 620 PIIGIDVTADGKWILATC--KTYLLLIDTL 647 (794)
T ss_pred CeeEEEecCCCcEEEEee--cceEEEEEEe
Confidence 999999999999877776 5678888864
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00046 Score=67.59 Aligned_cols=140 Identities=10% Similarity=0.038 Sum_probs=84.0
Q ss_pred CeEEEEeCCC----CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc-eEEEe
Q psy4571 172 KTVALWDLRN----LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE-LLFIH 246 (437)
Q Consensus 172 g~i~lwd~~~----~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~ 246 (437)
+.|.+.|.++ +......+ .-......++++|||+++++++..+.+|.|.|+.+......-. ..+.. .+...
T Consensus 296 n~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~---~~~~~~vvaev 371 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGK---IKPRDAVVAEP 371 (635)
T ss_pred CEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhcc---CCccceEEEee
Confidence 4577777776 22223223 2345668899999999988888899999999998865321100 00111 11111
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC------C----CCceeeeeee--cccCCceeeeecCCCCccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST------D----SDTKTMRLDS--IRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~------~----~~~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~ 314 (437)
.- .......+|.++|. ...|--.|..|..||+.. | ..+..+..+- .|......-.-.|||++|++.
T Consensus 372 ev-GlGPLHTaFDg~G~-aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~ 449 (635)
T PRK02888 372 EL-GLGPLHTAFDGRGN-AYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSL 449 (635)
T ss_pred cc-CCCcceEEECCCCC-EEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEc
Confidence 11 22335578999987 777888999999999886 2 2222222211 111111222458899999887
Q ss_pred CCC
Q psy4571 315 SPT 317 (437)
Q Consensus 315 s~d 317 (437)
..-
T Consensus 450 nk~ 452 (635)
T PRK02888 450 NKF 452 (635)
T ss_pred ccc
Confidence 543
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00057 Score=65.45 Aligned_cols=168 Identities=15% Similarity=0.120 Sum_probs=102.4
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCC---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe--EEEE
Q psy4571 147 AHTAEVNCLSFNPYSEYILATGSAD---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR--LHVW 221 (437)
Q Consensus 147 ~h~~~v~~l~~~~~~~~~l~sgs~d---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~--i~vw 221 (437)
.-...+..-+|+|++..+....-.. ..+.++|+.+++.. ... ...+.-..-+|+|||+.++.+...||. |.+.
T Consensus 190 ~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~-~i~-~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~ 267 (425)
T COG0823 190 DSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP-VIL-NFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLM 267 (425)
T ss_pred ccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccc-eee-ccCCccCCccCCCCCCEEEEEECCCCCccEEEE
Confidence 3345677788999998744443333 34899999986652 222 234445567899999998888888887 5556
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEE--eCCCCCCceeeeeeecccCCc
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY--CDSTDSDTKTMRLDSIRSNGG 299 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~ 299 (437)
|+......+ +....+.. ..=.|+|||++++.+.+..|.-.|| |.+.+.. ..+... ....
T Consensus 268 dl~~~~~~~------------Lt~~~gi~---~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~---~~~~ 328 (425)
T COG0823 268 DLDGKNLPR------------LTNGFGIN---TSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFS---GGGN 328 (425)
T ss_pred cCCCCccee------------cccCCccc---cCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeecc---CCCC
Confidence 666654211 11122222 2567999999888887777765554 5555433 333321 2223
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
....+||||+.++..+..+.- ..|.+.|..++...+
T Consensus 329 ~~p~~SpdG~~i~~~~~~~g~--------~~i~~~~~~~~~~~~ 364 (425)
T COG0823 329 SNPVWSPDGDKIVFESSSGGQ--------WDIDKNDLASGGKIR 364 (425)
T ss_pred cCccCCCCCCEEEEEeccCCc--------eeeEEeccCCCCcEE
Confidence 366899999999877733110 115566666655433
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0052 Score=63.64 Aligned_cols=200 Identities=12% Similarity=0.207 Sum_probs=121.7
Q ss_pred CceeEEEecCCCCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc----CCCC-
Q psy4571 67 PFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT----RSHN- 137 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~----~~~~- 137 (437)
+.+.++.+......+ .....|.|.+-|......- ....+|.+++||| ++..++..+..+++.+-+- -...
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~-Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSP-DEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecC-CCcEEEEEeCCcEEEEEeccccchhccc
Confidence 467777776665555 6667888887775543321 2456899999999 6888888888887766433 1000
Q ss_pred ---------------CCCCeeeeccCC---------------------CCeEEEEEeCCCCcEEEEEe-----CCCeEEE
Q psy4571 138 ---------------VSKPSHTVDAHT---------------------AEVNCLSFNPYSEYILATGS-----ADKTVAL 176 (437)
Q Consensus 138 ---------------~~~~~~~~~~h~---------------------~~v~~l~~~~~~~~~l~sgs-----~dg~i~l 176 (437)
-++....+.+.. +.=++|+|--||++ +++.. ..+.|++
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~-fAVs~~~~~~~~RkirV 226 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEY-FAVSFVESETGTRKIRV 226 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcE-EEEEEEeccCCceeEEE
Confidence 011111222111 11235899999996 77632 2378999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEE---eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
||-+ +.. -..-..-.+.=.+++|-|.|. ++++- ..|+.|.+|.-.....-. ....+.....+|
T Consensus 227 ~drE-g~L-ns~se~~~~l~~~LsWkPsgs-~iA~iq~~~sd~~IvffErNGL~hg~-----------f~l~~p~de~~v 292 (1265)
T KOG1920|consen 227 YDRE-GAL-NSTSEPVEGLQHSLSWKPSGS-LIAAIQCKTSDSDIVFFERNGLRHGE-----------FVLPFPLDEKEV 292 (1265)
T ss_pred eccc-chh-hcccCcccccccceeecCCCC-eEeeeeecCCCCcEEEEecCCccccc-----------cccCCcccccch
Confidence 9987 232 112222233446899999997 46654 346679898876543211 011122223348
Q ss_pred EEEEEccCCCeEEEE---EeCCCeEEEEeCCCC
Q psy4571 254 SDFSWNPNEPWVICS---VSEDNIMQEYCDSTD 283 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s---~~~dg~i~iwd~~~~ 283 (437)
..++|+.++. +|+. ......|++|-+.+.
T Consensus 293 e~L~Wns~sd-iLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 293 EELAWNSNSD-ILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred heeeecCCCC-ceeeeecccccceEEEEEecCe
Confidence 9999999998 6766 445556999988764
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00014 Score=69.57 Aligned_cols=97 Identities=20% Similarity=0.330 Sum_probs=76.9
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE-EEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN-CLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
..+..+.-+.|+| .-.++|.+..+|.|.+..+. .+.+.++.-|...++ +++|.|||+ +|+.|-.||+|++.|.
T Consensus 18 ~l~~~i~~~ewnP-~~dLiA~~t~~gelli~R~n----~qRlwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dv 91 (665)
T KOG4640|consen 18 SLPINIKRIEWNP-KMDLIATRTEKGELLIHRLN----WQRLWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDV 91 (665)
T ss_pred ccccceEEEEEcC-ccchhheeccCCcEEEEEec----cceeEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEc
Confidence 3456778899999 68899999999999999887 455667766777777 999999999 6999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcC
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
.++.........-...|.++-|.|
T Consensus 92 e~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 92 EKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred cCCCceeccccccccchheeeccc
Confidence 997763322233456778888864
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.019 Score=50.67 Aligned_cols=146 Identities=16% Similarity=0.085 Sum_probs=83.8
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCC---CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHT---AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~---~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
+..+++++.++.++.+|..+ ++.+... .... ...........+.. ++.+..++.|..+|+++++. +.....
T Consensus 76 ~~~v~v~~~~~~l~~~d~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~l~~~d~~tG~~-~w~~~~ 150 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKT---GKVLWSIYLTSSPPAGVRSSSSPAVDGDR-LYVGTSSGKLVALDPKTGKL-LWKYPV 150 (238)
T ss_dssp TTEEEEEETTSEEEEEETTT---SCEEEEEEE-SSCTCSTB--SEEEEETTE-EEEEETCSEEEEEETTTTEE-EEEEES
T ss_pred ccccccccceeeeEecccCC---cceeeeeccccccccccccccCceEecCE-EEEEeccCcEEEEecCCCcE-EEEeec
Confidence 45566677888999999884 4555442 2211 11122222333664 88888899999999999776 554443
Q ss_pred CCCc----------eEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 192 HKDE----------IFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 192 h~~~----------v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.... +..-....++ . +..++.++. +.+ |+.+++. +.... ...+..+ ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-~-v~~~~~~g~~~~~-d~~tg~~--------------~w~~~--~~~~~~~-~~~ 210 (238)
T PF13360_consen 151 GEPRGSSPISSFSDINGSPVISDG-R-VYVSSGDGRVVAV-DLATGEK--------------LWSKP--ISGIYSL-PSV 210 (238)
T ss_dssp STT-SS--EEEETTEEEEEECCTT-E-EEEECCTSSEEEE-ETTTTEE--------------EEEEC--SS-ECEC-EEC
T ss_pred CCCCCCcceeeecccccceEEECC-E-EEEEcCCCeEEEE-ECCCCCE--------------EEEec--CCCccCC-cee
Confidence 3221 1222222344 3 555566675 555 9988642 12122 1122221 345
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCce
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTK 287 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~ 287 (437)
.+. .++.++.++.+..||+++++...
T Consensus 211 ~~~-~l~~~~~~~~l~~~d~~tG~~~W 236 (238)
T PF13360_consen 211 DGG-TLYVTSSDGRLYALDLKTGKVVW 236 (238)
T ss_dssp CCT-EEEEEETTTEEEEEETTTTEEEE
T ss_pred eCC-EEEEEeCCCEEEEEECCCCCEEe
Confidence 666 55566699999999999987543
|
... |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0021 Score=48.19 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=70.0
Q ss_pred cceEEeeC---CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 106 RQDVAWHL---LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 106 v~~~~~sp---~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
|+++++.. ++.+.|++|+.|..||+|+-+ ..+..+.. .+.|.++.-...+. ++.|..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-----e~~~Ei~e-~~~v~~L~~~~~~~--F~Y~l~NGTVGvY~~~~- 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-----EIVAEITE-TDKVTSLCSLGGGR--FAYALANGTVGVYDRSQ- 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-----cEEEEEec-ccceEEEEEcCCCE--EEEEecCCEEEEEeCcc-
Confidence 45555544 345789999999999999865 44555544 45788888777643 89999999999998754
Q ss_pred ceeeeEeccCCCceEEEEEcC---CCCcEEEEEeCCCeEE
Q psy4571 183 KLKLHSFESHKDEIFQVQWSP---HNETILASSGTDRRLH 219 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p---~~~~~l~sg~~dg~i~ 219 (437)
. +...+. +..+.++++.. +|..-|++|-.+|.|-
T Consensus 73 -R-lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 73 -R-LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -e-eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 2 334432 33356665543 3444588998899874
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0061 Score=58.08 Aligned_cols=214 Identities=13% Similarity=0.099 Sum_probs=138.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe--CCCeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS--ADKTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs--~dg~i~lwd~~~~ 182 (437)
....++.++.+.+.++....++.|.+.|.. ..+......- ......++++|+++++.++-. .++++.+.|..+.
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~---~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTA---TNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCc---ccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 345788888666678777778999999976 3333333322 225678999999997555555 3789999999986
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+. ......-..+ ..+++.|+|..++++-..++.|.+.|........ .. ... ...-...-..+.+.|+|
T Consensus 151 ~~-~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~-----~~~----~~~~~~~P~~i~v~~~g 218 (381)
T COG3391 151 KV-TATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS-----VGS----LVGVGTGPAGIAVDPDG 218 (381)
T ss_pred eE-EEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc-----ccc----ccccCCCCceEEECCCC
Confidence 66 3334333344 8999999999767676789999999976643221 00 000 01112234668899999
Q ss_pred CeEEEEEeCC--CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC-Ccccccccccccccccccchhh
Q psy4571 263 PWVICSVSED--NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-PTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 263 ~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
.++.++...+ +.+...|..++........ .... .......+|+|..+...... +. +.+-|..+.
T Consensus 219 ~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~-~~~~-~~~~v~~~p~g~~~yv~~~~~~~-----------V~vid~~~~ 285 (381)
T COG3391 219 NRVYVANDGSGSNNVLKIDTATGNVTATDLP-VGSG-APRGVAVDPAGKAAYVANSQGGT-----------VSVIDGATD 285 (381)
T ss_pred CEEEEEeccCCCceEEEEeCCCceEEEeccc-cccC-CCCceeECCCCCEEEEEecCCCe-----------EEEEeCCCC
Confidence 9666665554 6899999888755443111 1111 45567889999988777433 34 566666666
Q ss_pred hhhhhhcC
Q psy4571 340 EEQRQLLG 347 (437)
Q Consensus 340 ~~~~~~~~ 347 (437)
.....+..
T Consensus 286 ~v~~~~~~ 293 (381)
T COG3391 286 RVVKTGPT 293 (381)
T ss_pred ceeeeecc
Confidence 65555433
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00066 Score=66.50 Aligned_cols=77 Identities=8% Similarity=0.034 Sum_probs=55.8
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc--------eeeeeeecccCCceeeeecCCCCcccccCCCCcccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT--------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSV 322 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~ 322 (437)
.....+.++|||+++++++..++++.+.|+.+.+.. ..+...-.-..++...+|.++|....+-.-|..
T Consensus 321 KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsq--- 397 (635)
T PRK02888 321 KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQ--- 397 (635)
T ss_pred CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecce---
Confidence 356789999999999999999999999999986531 111111112456777899999886666665555
Q ss_pred cccccccccccccchh
Q psy4571 323 HEKNYWQGLVLFDILV 338 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~ 338 (437)
+-.||+..
T Consensus 398 --------v~kwn~~~ 405 (635)
T PRK02888 398 --------IVKWNIEA 405 (635)
T ss_pred --------eEEEehHH
Confidence 77888876
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.017 Score=55.45 Aligned_cols=254 Identities=9% Similarity=-0.056 Sum_probs=131.0
Q ss_pred cceEEEeeccCceEeeecCCCcee-EEEecC-------------------CCCeE-EEecCceEEEEEeeecccc---cc
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLY-DLVVNN-------------------YVANI-SCILNISILFFEIIFTQNF---PF 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~-------------------~~~~i-~~~~~~~i~~~~~~~~~~~---~~ 102 (437)
++.++.++.++.+..+|..+|.+. ...... ....+ ....++.+..+|...++.. ..
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 148 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV 148 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence 556667777777777775544422 211111 01122 3335667777886655532 11
Q ss_pred CCCcce-EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCe-----EEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 103 PLSRQD-VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV-----NCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 103 ~~~v~~-~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
...+.+ -.. .+..++.+..+|.+.-+|.+++ +.+.......... .+-... +. .++.++.+|.+..
T Consensus 149 ~~~~~ssP~v---~~~~v~v~~~~g~l~ald~~tG---~~~W~~~~~~~~~~~~~~~sP~v~--~~-~v~~~~~~g~v~a 219 (394)
T PRK11138 149 AGEALSRPVV---SDGLVLVHTSNGMLQALNESDG---AVKWTVNLDVPSLTLRGESAPATA--FG-GAIVGGDNGRVSA 219 (394)
T ss_pred CCceecCCEE---ECCEEEEECCCCEEEEEEccCC---CEeeeecCCCCcccccCCCCCEEE--CC-EEEEEcCCCEEEE
Confidence 111111 111 2345667788899999999844 4443332111000 001111 23 3667788999999
Q ss_pred EeCCCCceeeeEeccCC----C---ceEEEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 177 WDLRNLKLKLHSFESHK----D---EIFQVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~----~---~v~~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
.|..+++. ........ . ....+.-+| .+.. ++.++.+|.+..+|..+++...+.. .
T Consensus 220 ~d~~~G~~-~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~-vy~~~~~g~l~ald~~tG~~~W~~~------------~- 284 (394)
T PRK11138 220 VLMEQGQL-IWQQRISQPTGATEIDRLVDVDTTPVVVGGV-VYALAYNGNLVALDLRSGQIVWKRE------------Y- 284 (394)
T ss_pred EEccCChh-hheeccccCCCccchhcccccCCCcEEECCE-EEEEEcCCeEEEEECCCCCEEEeec------------C-
Confidence 99988764 33221100 0 011111122 2333 5566789999999998875433210 0
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY 327 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~ 327 (437)
+ ....+.. .+. .++.++.||.+..+|..+++.+....... ......... .+..+..++.++.
T Consensus 285 ~---~~~~~~~--~~~-~vy~~~~~g~l~ald~~tG~~~W~~~~~~--~~~~~sp~v--~~g~l~v~~~~G~-------- 346 (394)
T PRK11138 285 G---SVNDFAV--DGG-RIYLVDQNDRVYALDTRGGVELWSQSDLL--HRLLTAPVL--YNGYLVVGDSEGY-------- 346 (394)
T ss_pred C---CccCcEE--ECC-EEEEEcCCCeEEEEECCCCcEEEcccccC--CCcccCCEE--ECCEEEEEeCCCE--------
Confidence 1 1111222 344 45677789999999999987543322100 000111111 2455666777777
Q ss_pred ccccccccchhhhhhhhh
Q psy4571 328 WQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 328 ~~~i~~wd~~~~~~~~~~ 345 (437)
+.+.|..+|+.+.+.
T Consensus 347 ---l~~ld~~tG~~~~~~ 361 (394)
T PRK11138 347 ---LHWINREDGRFVAQQ 361 (394)
T ss_pred ---EEEEECCCCCEEEEE
Confidence 677788888766544
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0023 Score=62.39 Aligned_cols=163 Identities=15% Similarity=0.109 Sum_probs=110.9
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
+.+-+|+=-|++ ..++.++.|+.-|.+-+++.|++........... ..+..+..
T Consensus 31 ~~~~~v~lTc~d-st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~-------------------------~~~~~~~v 84 (726)
T KOG3621|consen 31 FFPARVKLTCVD-ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGAT-------------------------GITCVRSV 84 (726)
T ss_pred cCcceEEEEEee-cCCceEEEecccceEEEEecCchhhhcccccCcc-------------------------ceEEEEEe
Confidence 345556667888 8899999999999999999999887766432211 12234556
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee---ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC---cee
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL---KLK 185 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~---~~~ 185 (437)
|+ .+.++|+|+..|.|.++-+...........- +.|+..|++++|++++.. +++|...|.|.+-.+.+. ...
T Consensus 85 s~-~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k-~ysGD~~Gkv~~~~L~s~~~~~~~ 162 (726)
T KOG3621|consen 85 SS-VEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMK-LYSGDSQGKVVLTELDSRQAFLSK 162 (726)
T ss_pred cc-hhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccE-EeecCCCceEEEEEechhhhhccc
Confidence 77 6789999999999999988764332222221 246789999999999996 999999999999888761 111
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
.+.+..-...|-.+.... + ++|++... ...+++++..
T Consensus 163 ~q~il~~ds~IVQlD~~q-~-~LLVStl~--r~~Lc~tE~e 199 (726)
T KOG3621|consen 163 SQEILSEDSEIVQLDYLQ-S-YLLVSTLT--RCILCQTEAE 199 (726)
T ss_pred cceeeccCcceEEeeccc-c-eehHhhhh--hhheeecchh
Confidence 233333456677777653 2 34555443 2335555543
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0064 Score=63.02 Aligned_cols=187 Identities=11% Similarity=0.171 Sum_probs=106.6
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCC----CceeEEEecCCCCeEEEecCceEEEEEeeecc----------
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----PFLYDLVVNNYVANISCILNISILFFEIIFTQ---------- 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---------- 98 (437)
--.+|.+++++ |+++.++-...++++-+....- .........+.+..+.++....-.-+....++
T Consensus 108 vd~GI~aaswS-~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~e 186 (1265)
T KOG1920|consen 108 VDNGISAASWS-PDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKE 186 (1265)
T ss_pred ccCceEEEeec-CCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccc
Confidence 35678888888 8888888888877777666421 11112222333344444433322222211111
Q ss_pred ----ccccCCCcceEEeeCCCCCEEEEE-----ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 99 ----NFPFPLSRQDVAWHLLHESLFGSV-----ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 99 ----~~~~~~~v~~~~~sp~~~~~l~~~-----~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.......-..|.|-- ++.+||+. ..-..|+|||-+ + ...... ..-.+.=.+++|-|.|. ++++-.
T Consensus 187 k~~~~~~~~~~~~~IsWRg-Dg~~fAVs~~~~~~~~RkirV~drE-g-~Lns~s--e~~~~l~~~LsWkPsgs-~iA~iq 260 (1265)
T KOG1920|consen 187 KALEQIEQDDHKTSISWRG-DGEYFAVSFVESETGTRKIRVYDRE-G-ALNSTS--EPVEGLQHSLSWKPSGS-LIAAIQ 260 (1265)
T ss_pred ccccchhhccCCceEEEcc-CCcEEEEEEEeccCCceeEEEeccc-c-hhhccc--CcccccccceeecCCCC-eEeeee
Confidence 011222335688887 57788772 223789999987 1 111111 11233346899999988 476653
Q ss_pred ---CCCeEEEEeCCCCcee--eeEeccCCCceEEEEEcCCCCcEEEE---EeCCCeEEEEEcCCCC
Q psy4571 170 ---ADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILAS---SGTDRRLHVWDLSKIG 227 (437)
Q Consensus 170 ---~dg~i~lwd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~s---g~~dg~i~vwd~~~~~ 227 (437)
.|+.|.++.-+..+.- ...+.....+|..++|+.++. +|+. ......|++|-+.+..
T Consensus 261 ~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd-iLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 261 CKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD-ILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred ecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC-ceeeeecccccceEEEEEecCeE
Confidence 3567888876542211 111222344589999999998 6776 4445559999987753
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.005 Score=62.72 Aligned_cols=143 Identities=14% Similarity=0.101 Sum_probs=96.7
Q ss_pred CCEEEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCC-eEEEEEeC-----CCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 116 ESLFGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAE-VNCLSFNP-----YSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 116 ~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~-v~~l~~~~-----~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
.++|+.- .....|+-.|++ .++.+..+..|... |..++=.. .... -+.|-.+..+..||.|-....+..
T Consensus 493 ~~mil~~~~~~~~ly~mDLe---~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~-tflGls~n~lfriDpR~~~~k~v~ 568 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLE---RGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQ-TFLGLSDNSLFRIDPRLSGNKLVD 568 (794)
T ss_pred cceEeecCCCCCceEEEecC---CCcEEEEeecCCCcceeEecccccccccCCCc-eEEEECCCceEEeccCCCCCceee
Confidence 4444433 345778888888 67888888877654 55553321 1222 567888899999999964322221
Q ss_pred ec----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 189 FE----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 189 ~~----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
-. ......+|++-..+|. +|.|+.+|.||+||--. ..-. ..+.+-..+|.+|..+.||+|
T Consensus 569 ~~~k~Y~~~~~Fs~~aTt~~G~--iavgs~~G~IRLyd~~g-~~AK-------------T~lp~lG~pI~~iDvt~DGkw 632 (794)
T PF08553_consen 569 SQSKQYSSKNNFSCFATTEDGY--IAVGSNKGDIRLYDRLG-KRAK-------------TALPGLGDPIIGIDVTADGKW 632 (794)
T ss_pred ccccccccCCCceEEEecCCce--EEEEeCCCcEEeecccc-hhhh-------------hcCCCCCCCeeEEEecCCCcE
Confidence 11 2345678888888884 89999999999999432 2111 224566789999999999998
Q ss_pred EEEEEeCCCeEEEEeC
Q psy4571 265 VICSVSEDNIMQEYCD 280 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~ 280 (437)
+|+|| +..+.+.+.
T Consensus 633 ilaTc--~tyLlLi~t 646 (794)
T PF08553_consen 633 ILATC--KTYLLLIDT 646 (794)
T ss_pred EEEee--cceEEEEEE
Confidence 88776 456777775
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.038 Score=52.15 Aligned_cols=150 Identities=12% Similarity=0.134 Sum_probs=81.6
Q ss_pred CCCeEEEEEeCCCCc-EEEEEeCCC---eEEEEeCCCCceeeeEeccCCCc---eEEEEEc-CCCCcEEEEEeCCCeEEE
Q psy4571 149 TAEVNCLSFNPYSEY-ILATGSADK---TVALWDLRNLKLKLHSFESHKDE---IFQVQWS-PHNETILASSGTDRRLHV 220 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~-~l~sgs~dg---~i~lwd~~~~~~~~~~~~~h~~~---v~~v~~~-p~~~~~l~sg~~dg~i~v 220 (437)
...+..+.|.+++.. ++.....+. .+.++|..++......-....+. -....|. +++..++.....||.-++
T Consensus 183 ~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hl 262 (353)
T PF00930_consen 183 DYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHL 262 (353)
T ss_dssp SEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEE
T ss_pred ccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEE
Confidence 345788999998883 233334333 36677887655422222222222 2345554 777766777778887555
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE-EEEccCCCeEEEEEeCC----CeEEEEeCCCCCCceeeeeeecc
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD-FSWNPNEPWVICSVSED----NIMQEYCDSTDSDTKTMRLDSIR 295 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~ 295 (437)
|-+...... ...+....-.|.. +.+.++++.+..++..+ ..++.-++..+...+.+..
T Consensus 263 y~~~~~~~~-------------~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~---- 325 (353)
T PF00930_consen 263 YLYDLDGGK-------------PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTC---- 325 (353)
T ss_dssp EEEETTSSE-------------EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESST----
T ss_pred EEEcccccc-------------eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccC----
Confidence 544432211 1223333445644 67888888677777653 3555556662223333332
Q ss_pred cCCc-eeeeecCCCCcccccC
Q psy4571 296 SNGG-ISSTASPTASSTASES 315 (437)
Q Consensus 296 ~~~~-~~~~~s~~g~~l~s~s 315 (437)
..+. ..+.|||+|++++...
T Consensus 326 ~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 326 EDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp TSSTTEEEEE-TTSSEEEEEE
T ss_pred CCCCceEEEECCCCCEEEEEE
Confidence 2233 4789999999877543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0007 Score=65.82 Aligned_cols=123 Identities=17% Similarity=0.196 Sum_probs=89.7
Q ss_pred CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCC
Q psy4571 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 148 h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~ 227 (437)
|...|.--+++..+++ ++.|+.-|.+.+++-..+........+-.+.+.....+++.. ++|.|+..|.|.|+-+....
T Consensus 32 ~~~~v~lTc~dst~~~-l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~-lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEY-LAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEY-LVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred CcceEEEEEeecCCce-EEEecccceEEEEecCchhhhcccccCccceEEEEEecchhH-hhhhhcCCceEEeehhhccC
Confidence 3445555566777886 999999999999998876653433333445566667777775 68999999999999887743
Q ss_pred CCCCCCCCCCCCCceEEE-ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 228 EEQSTEDAEDGPPELLFI-HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.... ..+.. -..|...|++++|++++. .+.+|...|+|..-.+..
T Consensus 110 p~~~---------~~~t~~d~~~~~rVTal~Ws~~~~-k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 110 PRDL---------DYVTPCDKSHKCRVTALEWSKNGM-KLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CCcc---------eeeccccccCCceEEEEEeccccc-EEeecCCCceEEEEEech
Confidence 3221 11111 123778999999999999 788999999999888876
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0033 Score=62.52 Aligned_cols=74 Identities=19% Similarity=0.358 Sum_probs=62.3
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.|..+++++|+| ..-.|+.|-.-|.+.+|...+ .+.-.....|+.+|..+.|||+|. .++++..-|.+.+|...
T Consensus 58 ~P~hatSLCWHp-e~~vLa~gwe~g~~~v~~~~~---~e~htv~~th~a~i~~l~wS~~G~-~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 58 YPVHATSLCWHP-EEFVLAQGWEMGVSDVQKTNT---TETHTVVETHPAPIQGLDWSHDGT-VLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cceehhhhccCh-HHHHHhhccccceeEEEecCC---ceeeeeccCCCCCceeEEecCCCC-eEEEcCCCceeEEEEee
Confidence 345677899999 678899999999999999873 334444557999999999999999 49999999999999876
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.064 Score=51.61 Aligned_cols=163 Identities=9% Similarity=0.049 Sum_probs=80.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC---CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN---VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
..+-++.|+. + ..|++...||.+++||+.... .+..+....-....+....+...| ++.-..++.+.+.+--
T Consensus 81 ~~iv~~~wt~-~-e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G---ivvLt~~~~~~~v~n~ 155 (410)
T PF04841_consen 81 GRIVGMGWTD-D-EELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG---IVVLTGNNRFYVVNNI 155 (410)
T ss_pred CCEEEEEECC-C-CeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC---EEEECCCCeEEEEeCc
Confidence 4677899987 3 455567889999999986221 011111111122223333333344 2222334444443322
Q ss_pred CCceeeeEec---c-----CCC-ceEE-EEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 181 NLKLKLHSFE---S-----HKD-EIFQ-VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 181 ~~~~~~~~~~---~-----h~~-~v~~-v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
........+. . +.. .... ..++.+.. ..+....++.+.+.+-..... . ...
T Consensus 156 ~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~-~~i~~~~g~~i~~i~~~~~~~-----------------i-~~~ 216 (410)
T PF04841_consen 156 DEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV-VEILLANGETIYIIDENSFKQ-----------------I-DSD 216 (410)
T ss_pred cccchhhccccCCCcccccccccccccceEeecCcc-eEEEEecCCEEEEEEcccccc-----------------c-cCC
Confidence 2111011110 0 000 0001 22333433 234444455555444322100 1 123
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
+++..++.||+|+ .+|.-..+|.+.+.+..-.+....+..
T Consensus 217 ~~i~~iavSpng~-~iAl~t~~g~l~v~ssDf~~~~~e~~~ 256 (410)
T PF04841_consen 217 GPIIKIAVSPNGK-FIALFTDSGNLWVVSSDFSEKLCEFDT 256 (410)
T ss_pred CCeEEEEECCCCC-EEEEEECCCCEEEEECcccceeEEeec
Confidence 5799999999999 777778889998887665544444443
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.072 Score=50.80 Aligned_cols=188 Identities=12% Similarity=0.111 Sum_probs=120.8
Q ss_pred cCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC
Q psy4571 85 LNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 85 ~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~ 159 (437)
.+..|.+.|..... ..........++++|+++...++-. .++++.+.|.. ..+.+.....-..+ ..++++|
T Consensus 94 ~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~---t~~~~~~~~vG~~P-~~~a~~p 169 (381)
T COG3391 94 DSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA---TNKVTATIPVGNTP-TGVAVDP 169 (381)
T ss_pred CCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCC---CCeEEEEEecCCCc-ceEEECC
Confidence 35677777733322 2223346778999996656665555 36888888887 34444443332334 8899999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeee-----EeccCCCceEEEEEcCCCCcEEEEEeCC--CeEEEEEcCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLH-----SFESHKDEIFQVQWSPHNETILASSGTD--RRLHVWDLSKIGEEQST 232 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~-----~~~~h~~~v~~v~~~p~~~~~l~sg~~d--g~i~vwd~~~~~~~~~~ 232 (437)
+|..++++-..++.|.+.|.+.... .. ... -...-..+.+.|+|.++.++...+ +.+...|..+.......
T Consensus 170 ~g~~vyv~~~~~~~v~vi~~~~~~v-~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~ 247 (381)
T COG3391 170 DGNKVYVTNSDDNTVSVIDTSGNSV-VRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATD 247 (381)
T ss_pred CCCeEEEEecCCCeEEEEeCCCcce-eccccccccc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEec
Confidence 9998666667899999999876443 21 111 123346789999999755555444 58888888775432210
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
...+-. ....+..+|+|....+.-+..+.+.+-|..+.........
T Consensus 248 ------------~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~ 293 (381)
T COG3391 248 ------------LPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPT 293 (381)
T ss_pred ------------cccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecc
Confidence 011111 3456889999995555546668999999888766655543
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.013 Score=44.02 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=67.8
Q ss_pred eEEEEEe---CCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 152 VNCLSFN---PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 152 v~~l~~~---~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
|+++++. .+|..-|++|+.|..|++|+-.. . +..+.. ...|++++-...++ |+.+-.+|+|-+|+-...
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~-~~Ei~e-~~~v~~L~~~~~~~--F~Y~l~NGTVGvY~~~~R-- 73 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--I-VAEITE-TDKVTSLCSLGGGR--FAYALANGTVGVYDRSQR-- 73 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--E-EEEEec-ccceEEEEEcCCCE--EEEEecCCEEEEEeCcce--
Confidence 4555554 45666799999999999998663 2 445543 46778887777653 788999999999986431
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEc---cCCCeEEEEEeCCCeEE
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWN---PNEPWVICSVSEDNIMQ 276 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---p~~~~~l~s~~~dg~i~ 276 (437)
. ...+.. ..+.++++. .||..-|++|=.+|.|-
T Consensus 74 -------------l-WRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 74 -------------L-WRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -------------e-eeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 1 222222 235555543 34444677888888774
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0007 Score=39.75 Aligned_cols=37 Identities=24% Similarity=0.463 Sum_probs=31.8
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEe
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd 279 (437)
+...+..|...|.++.|+|.+. ++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGK-YLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCC-EEEEecCCCeEEEcC
Confidence 3455667888999999999987 788999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0055 Score=53.51 Aligned_cols=183 Identities=11% Similarity=0.031 Sum_probs=105.7
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~ 236 (437)
.+||++-.++.+++|.+.- .. .-...-..++++|.-+.-++-+-.-|+ ..++|....+.+.......
T Consensus 44 ~~dgs~g~a~~~eaGk~v~-----------~~-~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~ 111 (366)
T COG3490 44 ARDGSFGAATLSEAGKIVF-----------AT-ALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQE 111 (366)
T ss_pred ccCCceeEEEEccCCceee-----------ee-ecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEeccc
Confidence 4677766666677765531 11 112333567888877766666666665 6789988876554422110
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
-+.+-+|. .|||||.++.+|-. .-|.|-+||.+.+ .+.+--...+..+...+.+.+||++++
T Consensus 112 ------~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~lm~DGrtlv 177 (366)
T COG3490 112 ------GRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTLMADGRTLV 177 (366)
T ss_pred ------Cceeeccc------ccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEEecCCcEEE
Confidence 12244553 69999995555432 2478999999854 222222233567788899999999988
Q ss_pred ccCCC-------Ccccccccccccccccccchhhhhhhhh--c--CCCccccccCCCCCCccccc
Q psy4571 313 SESPT-------PTNSVHEKNYWQGLVLFDILVCEEQRQL--L--GTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 313 s~s~d-------~~~~~~~~~~~~~i~~wd~~~~~~~~~~--~--~h~~~~~~~~~~~~~~~~~~ 366 (437)
.+... +...+--+.+.-.+.+.|..+|+++.+. . -+...+..+...+||+....
T Consensus 178 vanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfg 242 (366)
T COG3490 178 VANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFG 242 (366)
T ss_pred EeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEE
Confidence 76431 1222222222233667787888876543 2 23334555555666664443
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.12 Score=47.31 Aligned_cols=194 Identities=9% Similarity=0.039 Sum_probs=106.3
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-c-CCCCeEEEEEeCCCCcEEEEEeCC--------
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-A-HTAEVNCLSFNPYSEYILATGSAD-------- 171 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~-h~~~v~~l~~~~~~~~~l~sgs~d-------- 171 (437)
.+..+.++..-. .+..|+++ ..| +.+++.+++.....+.... + -....+.+...|+|.. ..+...
T Consensus 64 ~p~~~~~~~~~d-~~g~Lv~~-~~g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~--wfgt~~~~~~~~~~ 138 (307)
T COG3386 64 SPGGFSSGALID-AGGRLIAC-EHG-VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRI--WFGDMGYFDLGKSE 138 (307)
T ss_pred CCCCcccceeec-CCCeEEEE-ccc-cEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCE--EEeCCCccccCccc
Confidence 444444444443 23444443 233 5667765322111111111 1 1245678888999983 333333
Q ss_pred ----CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEe
Q psy4571 172 ----KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 ----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~ 246 (437)
|.|.-.|. .+.. ......+-..-+.++||||++.++++=+..+.|.-|++... ..... .......
T Consensus 139 ~~~~G~lyr~~p-~g~~-~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~--------~~~~~~~ 208 (307)
T COG3386 139 ERPTGSLYRVDP-DGGV-VRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGG--------RRGFVDF 208 (307)
T ss_pred cCCcceEEEEcC-CCCE-EEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCC--------cceEEEc
Confidence 33333343 2222 44444444556889999999976666666788999888641 11111 1112223
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCC-eEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCcccccC
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDN-IMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASES 315 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~s~s 315 (437)
....+..-.++...+|. +.+++..+| .|..|+.. ++.+..+.+.. ..+.+++| .|+.+.|...+
T Consensus 209 ~~~~G~PDG~~vDadG~-lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~---~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 209 DEEPGLPDGMAVDADGN-LWVAAVWGGGRVVRFNPD-GKLLGEIKLPV---KRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred cCCCCCCCceEEeCCCC-EEEecccCCceEEEECCC-CcEEEEEECCC---CCCccceEeCCCcCEEEEEe
Confidence 33445566677778888 454444444 99999999 88888887632 44455555 55566555444
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.025 Score=54.32 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=99.3
Q ss_pred cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce-----eeeEeccCCCceEEEEE
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL-----KLHSFESHKDEIFQVQW 201 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~-----~~~~~~~h~~~v~~v~~ 201 (437)
.|.||+.. ++.+..+.-..+.+.++.|+.+.. |+.-..||.++++|+..... ......-....+....+
T Consensus 62 ~I~iys~s----G~ll~~i~w~~~~iv~~~wt~~e~--LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~ 135 (410)
T PF04841_consen 62 SIQIYSSS----GKLLSSIPWDSGRIVGMGWTDDEE--LVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWF 135 (410)
T ss_pred EEEEECCC----CCEeEEEEECCCCEEEEEECCCCe--EEEEEcCCEEEEEeCCCceeechhhhccccCccccccccccc
Confidence 48888886 455555544448999999998654 77778999999999874220 01111111122333344
Q ss_pred cCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 202 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 202 ~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
..+| +++. ..++.+.+. .+............ .+........+........++.+.. ..+....++.+.+-+-.
T Consensus 136 ~~~G--ivvL-t~~~~~~~v--~n~~~~~~~~~~~~-~p~~~~~~~~~~~~~~i~~l~~~~~-~~i~~~~g~~i~~i~~~ 208 (410)
T PF04841_consen 136 YKNG--IVVL-TGNNRFYVV--NNIDEPVKLRRLPE-IPGLWTKFHWWPSWTVIPLLSSDRV-VEILLANGETIYIIDEN 208 (410)
T ss_pred CCCC--EEEE-CCCCeEEEE--eCccccchhhcccc-CCCcccccccccccccceEeecCcc-eEEEEecCCEEEEEEcc
Confidence 4455 2322 234444333 22221110000000 0011111111111111133455555 44455556666655443
Q ss_pred CCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 282 TDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
..+. +. .......+++||+|+++|.-..++.+.+...+..+.+...|+.
T Consensus 209 ~~~~---i~----~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~ 257 (410)
T PF04841_consen 209 SFKQ---ID----SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD 257 (410)
T ss_pred cccc---cc----CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC
Confidence 3211 11 1245677899999999999988888877777666666666665
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00016 Score=54.15 Aligned_cols=50 Identities=36% Similarity=0.632 Sum_probs=41.9
Q ss_pred cCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccCC
Q psy4571 371 MTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPDS 427 (437)
Q Consensus 371 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~~ 427 (437)
++.+++..|...|..+. +..|.++|..++.+|.+|+||.+.|.+||+...
T Consensus 4 ls~~e~~~y~~~F~~l~-------~~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD 53 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLD-------PQDGKISGDQAREFFMKSGLPRDVLAQIWNLAD 53 (104)
T ss_dssp -SCCHHHHHHHHHHCTS-------SSTTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhcC-------CCCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 35667888999998876 445899999999999999999999999998643
|
... |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.025 Score=53.72 Aligned_cols=175 Identities=15% Similarity=0.133 Sum_probs=91.0
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE-ecc------CCCceEEEEEcC-----CC--Cc
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-FES------HKDEIFQVQWSP-----HN--ET 207 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~------h~~~v~~v~~~p-----~~--~~ 207 (437)
...+....++|++++.|.-| ++|.|+++|.+.|.|+|........ +.. ....|+++.|.. |+ .-
T Consensus 79 ~~l~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi 156 (395)
T PF08596_consen 79 LTLLDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSI 156 (395)
T ss_dssp EEEE---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEE
T ss_pred hhheeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccce
Confidence 34445567899999998666 5999999999999999876542221 111 234577888762 22 12
Q ss_pred EEEEEeCCCeEEEEEcCC-CCCCCCCC--------C----------CC--------------------------------
Q psy4571 208 ILASSGTDRRLHVWDLSK-IGEEQSTE--------D----------AE-------------------------------- 236 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~-~~~~~~~~--------~----------~~-------------------------------- 236 (437)
.++.|...|.+.+|.+.- ........ . ..
T Consensus 157 ~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~ 236 (395)
T PF08596_consen 157 CLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESD 236 (395)
T ss_dssp EEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccc
Confidence 577888889999997741 11100000 0 00
Q ss_pred -----CCCCceEEEecCccccEEEEEEcc----CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec-ccCCceeeeecC
Q psy4571 237 -----DGPPELLFIHGGHTAKISDFSWNP----NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI-RSNGGISSTASP 306 (437)
Q Consensus 237 -----~~~~~~~~~~~~h~~~v~~l~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~s~ 306 (437)
....+..............+.+-+ .+...|++-..||.++++.+...+.+..+..... .........+++
T Consensus 237 irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~ 316 (395)
T PF08596_consen 237 IRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISR 316 (395)
T ss_dssp EEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-T
T ss_pred eEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECC
Confidence 000000111111111233344421 2334677888999999999999888777765321 112334457788
Q ss_pred CCCcccccCCCC
Q psy4571 307 TASSTASESPTP 318 (437)
Q Consensus 307 ~g~~l~s~s~d~ 318 (437)
+|..+...+...
T Consensus 317 ~Gdi~~~~gpsE 328 (395)
T PF08596_consen 317 NGDIFYWTGPSE 328 (395)
T ss_dssp TS-EEEE-SSSE
T ss_pred CCCEEEEeCccc
Confidence 998877666544
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00069 Score=39.78 Aligned_cols=37 Identities=38% Similarity=0.653 Sum_probs=31.9
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
+...+..|...|.++.|++.+. ++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGK-YLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCC-EEEEecCCCeEEEcC
Confidence 4456667888999999999887 599999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0023 Score=61.62 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=66.6
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceE-EEEEcCCCCcEEEEEeCCCeEEEEEcCCCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF-QVQWSPHNETILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~ 227 (437)
.-.+.-+.|+|.-. ++|.+..+|.|.+..+.. +. +.++.-+..+++ +++|.|||+ ++|.|-.||+|++-|+.++.
T Consensus 20 ~~~i~~~ewnP~~d-LiA~~t~~gelli~R~n~-qR-lwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 20 PINIKRIEWNPKMD-LIATRTEKGELLIHRLNW-QR-LWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred ccceEEEEEcCccc-hhheeccCCcEEEEEecc-ce-eEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEccCCC
Confidence 34678899999888 799999999999999884 33 777776777777 999999998 79999999999999999876
Q ss_pred CCCC
Q psy4571 228 EEQS 231 (437)
Q Consensus 228 ~~~~ 231 (437)
....
T Consensus 96 ~l~~ 99 (665)
T KOG4640|consen 96 RLVS 99 (665)
T ss_pred ceec
Confidence 5443
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.082 Score=51.06 Aligned_cols=212 Identities=13% Similarity=0.116 Sum_probs=105.0
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC------CCceeEEEecCCCCeEEEecCceEEEEE-eeecc--ccccCC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN------TPFLYDLVVNNYVANISCILNISILFFE-IIFTQ--NFPFPL 104 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~------~~~~~~~~~~~~~~~i~~~~~~~i~~~~-~~~~~--~~~~~~ 104 (437)
......+.++ |+++.++.+ .|+...++... .|...+.+|.+.+...+.....+|.++. ..... .+..+.
T Consensus 32 ~~~p~~ls~n-pngr~v~V~-g~geY~iyt~~~~r~k~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~~ 109 (443)
T PF04053_consen 32 EIYPQSLSHN-PNGRFVLVC-GDGEYEIYTALAWRNKAFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLPF 109 (443)
T ss_dssp SS--SEEEE--TTSSEEEEE-ETTEEEEEETTTTEEEEEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----SS
T ss_pred CcCCeeEEEC-CCCCEEEEE-cCCEEEEEEccCCcccccCceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcCCc
Confidence 3446788999 999999884 57777777732 3556677787765555555678899864 33322 333333
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC--
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL-- 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~-- 182 (437)
.+..+ .+ |.+|+..+. +.|.+||.+ +.+.++.+... +|..+.|+++|.+ ++-.+.+ ++.+.+.+..
T Consensus 110 ~~~~I--f~--G~LL~~~~~-~~i~~yDw~---~~~~i~~i~v~--~vk~V~Ws~~g~~-val~t~~-~i~il~~~~~~~ 177 (443)
T PF04053_consen 110 SVEKI--FG--GNLLGVKSS-DFICFYDWE---TGKLIRRIDVS--AVKYVIWSDDGEL-VALVTKD-SIYILKYNLEAV 177 (443)
T ss_dssp -EEEE--E---SSSEEEEET-TEEEEE-TT---T--EEEEESS---E-EEEEE-TTSSE-EEEE-S--SEEEEEE-HHHH
T ss_pred ccceE--Ec--CcEEEEECC-CCEEEEEhh---HcceeeEEecC--CCcEEEEECCCCE-EEEEeCC-eEEEEEecchhc
Confidence 33333 32 566666554 489999999 56777776533 4899999999995 6655544 6777765532
Q ss_pred --------ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 183 --------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 183 --------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+............|.+.+|..+ -++.|.. . .++. +..+.. ..+..+ ..++.
T Consensus 178 ~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~-~-~lkY--l~~Ge~------------~~i~~l---d~~~y 236 (443)
T PF04053_consen 178 AAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTS-N-HLKY--LVNGET------------GIIAHL---DKPLY 236 (443)
T ss_dssp HHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-T-T-EEEE--EETTEE------------EEEEE----SS--E
T ss_pred ccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcC-C-eEEE--EEcCCc------------ceEEEc---CCceE
Confidence 0013333333567888888765 2344433 3 6665 322211 111111 23344
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
=+.+.|..+ .+.....|+.+..+.+.
T Consensus 237 llgy~~~~~-~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 237 LLGYLPKEN-RLYLIDRDGNVISYELD 262 (443)
T ss_dssp EEEEETTTT-EEEEE-TT--EEEEE--
T ss_pred EEEEEccCC-EEEEEECCCCEEEEEEC
Confidence 445555444 44455566666666554
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.06 Score=50.84 Aligned_cols=249 Identities=14% Similarity=0.109 Sum_probs=118.9
Q ss_pred eEEEEEeeecccccc---CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-eecc-------C--------
Q psy4571 88 SILFFEIIFTQNFPF---PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDA-------H-------- 148 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~---~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~-------h-------- 148 (437)
.+.++|+...+..++ ...+....||| +++.++-.. ++.|.+++..++. ..+ +..+ -
T Consensus 24 ~y~i~d~~~~~~~~l~~~~~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~~~---~~~lT~dg~~~i~nG~~dwvyeEE 98 (353)
T PF00930_consen 24 DYYIYDIETGEITPLTPPPPKLQDAKWSP-DGKYIAFVR-DNNLYLRDLATGQ---ETQLTTDGEPGIYNGVPDWVYEEE 98 (353)
T ss_dssp EEEEEETTTTEEEESS-EETTBSEEEE-S-SSTEEEEEE-TTEEEEESSTTSE---EEESES--TTTEEESB--HHHHHH
T ss_pred eEEEEecCCCceEECcCCccccccceeec-CCCeeEEEe-cCceEEEECCCCC---eEEeccccceeEEcCccceecccc
Confidence 455566554443333 34688999999 577777665 6789999876431 111 1111 0
Q ss_pred -CCCeEEEEEeCCCCcEEEEEeCCCeEEE-----------------------------------EeCCCCceeeeE-e--
Q psy4571 149 -TAEVNCLSFNPYSEYILATGSADKTVAL-----------------------------------WDLRNLKLKLHS-F-- 189 (437)
Q Consensus 149 -~~~v~~l~~~~~~~~~l~sgs~dg~i~l-----------------------------------wd~~~~~~~~~~-~-- 189 (437)
-+.-..+.||||+++++..--.+..|+. +|+.+++..... .
T Consensus 99 v~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~ 178 (353)
T PF00930_consen 99 VFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNS 178 (353)
T ss_dssp TSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HH
T ss_pred ccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccc
Confidence 1123568899999974444433333333 333332210000 0
Q ss_pred -ccCCCceEEEEEcCCCCc-EEEEEeCCCe---EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE---EEEEEc-c
Q psy4571 190 -ESHKDEIFQVQWSPHNET-ILASSGTDRR---LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI---SDFSWN-P 260 (437)
Q Consensus 190 -~~h~~~v~~v~~~p~~~~-~l~sg~~dg~---i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---~~l~~~-p 260 (437)
..-..-+..+.|.+++.. ++.....+.. +.+.|..++.... +.. ......| ....|. +
T Consensus 179 ~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~------------~~~-e~~~~Wv~~~~~~~~~~~ 245 (353)
T PF00930_consen 179 LNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRV------------VLE-ETSDGWVDVYDPPHFLGP 245 (353)
T ss_dssp HHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEE------------EEE-EESSSSSSSSSEEEE-TT
T ss_pred cCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeE------------EEE-ecCCcceeeecccccccC
Confidence 112234678888888873 2333344432 5666776543221 111 1111121 234444 7
Q ss_pred CCCeEEEEEeCCCeEEEEeC--CCCCCceeeeeeecccCCce-eeeecCCCCccc-ccCCCCcccccccccccccccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCD--STDSDTKTMRLDSIRSNGGI-SSTASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~-~~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
++..++.....||.-+++-+ ..+. .+.+.. ..-.+. ...+++++..+. ++..+. ...+.+..-++
T Consensus 246 ~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~---G~~~V~~i~~~d~~~~~iyf~a~~~~-------p~~r~lY~v~~ 314 (353)
T PF00930_consen 246 DGNEFLWISERDGYRHLYLYDLDGGK-PRQLTS---GDWEVTSILGWDEDNNRIYFTANGDN-------PGERHLYRVSL 314 (353)
T ss_dssp TSSEEEEEEETTSSEEEEEEETTSSE-EEESS----SSS-EEEEEEEECTSSEEEEEESSGG-------TTSBEEEEEET
T ss_pred CCCEEEEEEEcCCCcEEEEEcccccc-eecccc---CceeecccceEcCCCCEEEEEecCCC-------CCceEEEEEEe
Confidence 77766666667776555544 4432 222211 111121 347778776544 333322 11112444455
Q ss_pred hhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 337 LVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 337 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
..+.....|...........++|+|..+.
T Consensus 315 ~~~~~~~~LT~~~~~~~~~~~Spdg~y~v 343 (353)
T PF00930_consen 315 DSGGEPKCLTCEDGDHYSASFSPDGKYYV 343 (353)
T ss_dssp TETTEEEESSTTSSTTEEEEE-TTSSEEE
T ss_pred CCCCCeEeccCCCCCceEEEECCCCCEEE
Confidence 53344455554443335778999987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0017 Score=64.49 Aligned_cols=113 Identities=19% Similarity=0.335 Sum_probs=84.5
Q ss_pred ceEEeeCCCCCEEEEEEC----CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 107 QDVAWHLLHESLFGSVAD----DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
+-..|+| ...+||+++. .|.|.||--. ++..+-+ ..+-.+++++|+|..- +|+.|-.-|.+.+|...+.
T Consensus 19 ti~SWHP-sePlfAVA~fS~er~GSVtIfadt-GEPqr~V----t~P~hatSLCWHpe~~-vLa~gwe~g~~~v~~~~~~ 91 (1416)
T KOG3617|consen 19 TISSWHP-SEPLFAVASFSPERGGSVTIFADT-GEPQRDV----TYPVHATSLCWHPEEF-VLAQGWEMGVSDVQKTNTT 91 (1416)
T ss_pred cccccCC-CCceeEEEEecCCCCceEEEEecC-CCCCccc----ccceehhhhccChHHH-HHhhccccceeEEEecCCc
Confidence 3467999 5778887764 5788888532 2111111 1233467899999765 6999999999999999884
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
+. ......|+.+|..+.|+|+|. .+.++..-|.+.+|.......
T Consensus 92 e~-htv~~th~a~i~~l~wS~~G~-~l~t~d~~g~v~lwr~d~~g~ 135 (1416)
T KOG3617|consen 92 ET-HTVVETHPAPIQGLDWSHDGT-VLMTLDNPGSVHLWRYDVIGE 135 (1416)
T ss_pred ee-eeeccCCCCCceeEEecCCCC-eEEEcCCCceeEEEEeeeccc
Confidence 43 555667999999999999998 699999999999998874433
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.029 Score=49.22 Aligned_cols=225 Identities=14% Similarity=0.087 Sum_probs=121.1
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCc-EEEEEcCCCCCCCCeeeeccCCCC--eEEEEEeCCCCcEEEEEeC-----CC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQK-LMIWDTRSHNVSKPSHTVDAHTAE--VNCLSFNPYSEYILATGSA-----DK 172 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~l~sgs~-----dg 172 (437)
..+.....++|+|....-++.+-.-|+ ..++|....+ ...++...+++ --.-.|||||.. |...-. -|
T Consensus 65 ~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~---~pv~~~s~~~RHfyGHGvfs~dG~~-LYATEndfd~~rG 140 (366)
T COG3490 65 ALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQ---EPVTLVSQEGRHFYGHGVFSPDGRL-LYATENDFDPNRG 140 (366)
T ss_pred ecccccCCeecCCCCcceEEEEecCCceEEEECCCCCc---CcEEEecccCceeecccccCCCCcE-EEeecCCCCCCCc
Confidence 345566788888876666777766665 4578887443 22222211111 112358999995 443322 37
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEE-E-------cCCCCCCCCCCCCCCCCCceEE
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW-D-------LSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vw-d-------~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
.|-+||.+..-..+..+..|.-....+.+.+||+. ++.+ +|-|..- | +.+++....+.....+..-...
T Consensus 141 ViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrt-lvva--nGGIethpdfgR~~lNldsMePSlvlld~atG~liekh 217 (366)
T COG3490 141 VIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRT-LVVA--NGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKH 217 (366)
T ss_pred eEEEEecccccceecccccCCcCcceeEEecCCcE-EEEe--CCceecccccCccccchhhcCccEEEEeccccchhhhc
Confidence 79999999765557778888888899999999996 4443 3334433 2 2222211111110011000001
Q ss_pred Eec--CccccEEEEEEccCCCeEEEEEeCCC-----eEEEEeCCCCCCceeeeeeec----ccCCceeeeecCCCCcccc
Q psy4571 245 IHG--GHTAKISDFSWNPNEPWVICSVSEDN-----IMQEYCDSTDSDTKTMRLDSI----RSNGGISSTASPTASSTAS 313 (437)
Q Consensus 245 ~~~--~h~~~v~~l~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~s~~g~~l~s 313 (437)
++. -+.-.++.++..+||. +++.+-.-| ---+=-...+++++-+....- ..+-+-+++...+..+++.
T Consensus 218 ~Lp~~l~~lSiRHld~g~dgt-vwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~l 296 (366)
T COG3490 218 TLPASLRQLSIRHLDIGRDGT-VWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVAL 296 (366)
T ss_pred cCchhhhhcceeeeeeCCCCc-EEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEE
Confidence 111 2345688888888888 554443222 111112233334333332110 0112233455666667777
Q ss_pred cCCCCcccccccccccccccccchhhhhhh
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
.+..|.. .-+||..+|..+.
T Consensus 297 TSP~GN~----------~vi~da~tG~vv~ 316 (366)
T COG3490 297 TSPRGNR----------AVIWDAATGAVVS 316 (366)
T ss_pred ecCCCCe----------EEEEEcCCCcEEe
Confidence 7777665 6899999998654
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.097 Score=49.79 Aligned_cols=51 Identities=4% Similarity=-0.110 Sum_probs=39.7
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 293 (437)
..+.+......+.+|+.+|.++ +.++...=|.|.++|+.++..++.++..+
T Consensus 299 ~r~~l~D~~R~~~~i~~sP~~~-laA~tDslGRV~LiD~~~~~vvrmWKGYR 349 (415)
T PF14655_consen 299 MRFGLPDSKREGESICLSPSGR-LAAVTDSLGRVLLIDVARGIVVRMWKGYR 349 (415)
T ss_pred eEEeeccCCceEEEEEECCCCC-EEEEEcCCCcEEEEECCCChhhhhhccCc
Confidence 3344555566789999999988 77777777999999999998887776543
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.046 Score=47.30 Aligned_cols=116 Identities=10% Similarity=-0.089 Sum_probs=80.5
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
...++.+.+++.|+..+.+.--|.++++..-... ...++.+-+.- -|+ +++.|+..|.+++.+..++.....
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~i--lg~RiE~sa~v-vgd-fVV~GCy~g~lYfl~~~tGs~~w~---- 88 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI--LGVRIECSAIV-VGD-FVVLGCYSGGLYFLCVKTGSQIWN---- 88 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEeehh--hCceeeeeeEE-ECC-EEEEEEccCcEEEEEecchhheee----
Confidence 3445556678999999999999999977633333 23455554444 355 488999999999999999854433
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
+..-..-=..-...+++. ++..|+.|+..+.-|.++..++...+
T Consensus 89 ----------f~~~~~vk~~a~~d~~~g-lIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 89 ----------FVILETVKVRAQCDFDGG-LIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred ----------eeehhhhccceEEcCCCc-eEEEecCCCcEEEecccccceEEecc
Confidence 111111111233567888 89999999999999999988776654
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.27 Score=47.17 Aligned_cols=135 Identities=13% Similarity=0.013 Sum_probs=71.8
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC-Cc
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK-DE 195 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~-~~ 195 (437)
..+..++.+|.+..+|..++ +.+.... .+....+.. .+.. ++.++.+|.+...|..+++. +.....-. ..
T Consensus 257 ~~vy~~~~~g~l~ald~~tG---~~~W~~~--~~~~~~~~~--~~~~-vy~~~~~g~l~ald~~tG~~-~W~~~~~~~~~ 327 (394)
T PRK11138 257 GVVYALAYNGNLVALDLRSG---QIVWKRE--YGSVNDFAV--DGGR-IYLVDQNDRVYALDTRGGVE-LWSQSDLLHRL 327 (394)
T ss_pred CEEEEEEcCCeEEEEECCCC---CEEEeec--CCCccCcEE--ECCE-EEEEcCCCeEEEEECCCCcE-EEcccccCCCc
Confidence 34555666777777777743 3222211 111111222 2443 77778899999999988664 32221111 11
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE-EEEEccCCCeEEEEEeCCCe
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS-DFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~p~~~~~l~s~~~dg~ 274 (437)
..+.... +. .++.++.||.+.+.|..+++...+ .+-....+. ...+ .++ .|+.++.||.
T Consensus 328 ~~sp~v~--~g-~l~v~~~~G~l~~ld~~tG~~~~~--------------~~~~~~~~~s~P~~-~~~--~l~v~t~~G~ 387 (394)
T PRK11138 328 LTAPVLY--NG-YLVVGDSEGYLHWINREDGRFVAQ--------------QKVDSSGFLSEPVV-ADD--KLLIQARDGT 387 (394)
T ss_pred ccCCEEE--CC-EEEEEeCCCEEEEEECCCCCEEEE--------------EEcCCCcceeCCEE-ECC--EEEEEeCCce
Confidence 1222221 33 367888899999999988753322 221111222 1112 133 4667889998
Q ss_pred EEEEeC
Q psy4571 275 MQEYCD 280 (437)
Q Consensus 275 i~iwd~ 280 (437)
++.++.
T Consensus 388 l~~~~~ 393 (394)
T PRK11138 388 VYAITR 393 (394)
T ss_pred EEEEeC
Confidence 887764
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.48 Score=46.93 Aligned_cols=142 Identities=11% Similarity=0.045 Sum_probs=77.4
Q ss_pred eEEEEeCCCCceeeeEecc--CCC----ceEEEEEc----CCCC--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 173 TVALWDLRNLKLKLHSFES--HKD----EIFQVQWS----PHNE--TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~--h~~----~v~~v~~~----p~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.|.-.|.++++. ...+.. |.. ......+. -++. .+++.++.+|.+...|.++++.......
T Consensus 257 ~l~Ald~~tG~~-~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~------ 329 (488)
T cd00216 257 SIVALDADTGKV-KWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPE------ 329 (488)
T ss_pred eEEEEcCCCCCE-EEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEe------
Confidence 799999999776 444321 110 00000111 1221 2577888899999999999875443110
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEE-----------------EeCCCeEEEEeCCCCCCceeeeeeecccC----Cc
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICS-----------------VSEDNIMQEYCDSTDSDTKTMRLDSIRSN----GG 299 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s-----------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~ 299 (437)
. ...++.+| +. +++. ...+|.+.-.|+.+|+.+........... ..
T Consensus 330 ------~-----~~~~~~~~-~~-vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~ 396 (488)
T cd00216 330 ------V-----EQPMAYDP-GL-VYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFP 396 (488)
T ss_pred ------e-----ccccccCC-ce-EEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCc
Confidence 0 01122333 11 2211 12467888889888887666554211000 00
Q ss_pred -eeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 300 -ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 300 -~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
........+..++.++.++. ++.+|..+|+++-+.
T Consensus 397 ~~~~~~~~~g~~v~~g~~dG~-----------l~ald~~tG~~lW~~ 432 (488)
T cd00216 397 HWGGSLATAGNLVFAGAADGY-----------FRAFDATTGKELWKF 432 (488)
T ss_pred ccCcceEecCCeEEEECCCCe-----------EEEEECCCCceeeEE
Confidence 01111235567888888887 788888888877554
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1029|consensus | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0014 Score=64.31 Aligned_cols=54 Identities=39% Similarity=0.704 Sum_probs=50.3
Q ss_pred ccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 366 NSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 366 ~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
...|-++.+++..+..+|..++ |..|+++|..||+||..|+||-+.|.+||-+.
T Consensus 5 ~n~WavT~~Er~K~~~qF~~Lk-------p~~gfitg~qArnfflqS~LP~~VLaqIWALs 58 (1118)
T KOG1029|consen 5 TNPWAVTDEERQKHDAQFGQLK-------PGQGFITGDQARNFFLQSGLPTPVLAQIWALS 58 (1118)
T ss_pred CCccccchHHHHHHHHHHhccC-------CCCCccchHhhhhhHHhcCCChHHHHHHHHhh
Confidence 5689999999999999999999 88899999999999999999999999999653
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.24 Score=44.83 Aligned_cols=151 Identities=16% Similarity=0.133 Sum_probs=87.3
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE------
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS------ 188 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~------ 188 (437)
.++.|+.|+.+| +.+++... ........ +...|..+...|+-.. |++- .|+.+.++++.........
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~--~~~~~~i~--~~~~I~ql~vl~~~~~-llvL-sd~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSD--PSKPTRIL--KLSSITQLSVLPELNL-LLVL-SDGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred CCCEEEEEECCC-EEEEEecC--CccceeEe--ecceEEEEEEecccCE-EEEE-cCCccEEEEchhhcccccccccccc
Confidence 467888899999 89999832 22333332 2334999999998774 4443 3599999999864432210
Q ss_pred -------eccCCCceEEEE--EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 189 -------FESHKDEIFQVQ--WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 189 -------~~~h~~~v~~v~--~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.......+...+ -.+.+...|+.+. ..+|.+|.......... ..+..+ .-...+.+++|.
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~---------~~~ke~-~lp~~~~~i~~~ 147 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFS---------KLLKEI-SLPDPPSSIAFL 147 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCccccc---------ceeEEE-EcCCCcEEEEEe
Confidence 111233444444 1233433454444 55899998876422110 111222 223678899998
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCce
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTK 287 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 287 (437)
++ .++.|..+ ...+.|+.++....
T Consensus 148 --~~-~i~v~~~~-~f~~idl~~~~~~~ 171 (275)
T PF00780_consen 148 --GN-KICVGTSK-GFYLIDLNTGSPSE 171 (275)
T ss_pred --CC-EEEEEeCC-ceEEEecCCCCceE
Confidence 33 45555544 47788998765533
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.15 Score=51.22 Aligned_cols=153 Identities=9% Similarity=0.012 Sum_probs=80.3
Q ss_pred CCcceEEeeCCCCCEEEEEE------CCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----
Q psy4571 104 LSRQDVAWHLLHESLFGSVA------DDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---- 171 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~------~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---- 171 (437)
..+...+.+|+ +..++... .|. .|.+++.. ...+++ ..+. ....-.|+|+|.. +.+....
T Consensus 350 ~~vsspaiSpd-G~~vA~v~~~~~~~~d~~s~Lwv~~~g--g~~~~l--t~g~--~~t~PsWspDG~~-lw~v~dg~~~~ 421 (591)
T PRK13616 350 GNITSAALSRS-GRQVAAVVTLGRGAPDPASSLWVGPLG--GVAVQV--LEGH--SLTRPSWSLDADA-VWVVVDGNTVV 421 (591)
T ss_pred cCcccceECCC-CCEEEEEEeecCCCCCcceEEEEEeCC--Ccceee--ecCC--CCCCceECCCCCc-eEEEecCcceE
Confidence 36788999995 55544443 244 44454542 122222 2232 3778899999886 5555422
Q ss_pred --------CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE---EEcCCCCCCCCCCCCCCCCC
Q psy4571 172 --------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV---WDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 172 --------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v---wd~~~~~~~~~~~~~~~~~~ 240 (437)
+.+.+.+++.+.. .. ...+.|..+.|+|||.++.+.. ++.|.+ -....+. ..+ .
T Consensus 422 ~v~~~~~~gql~~~~vd~ge~-~~---~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~--~~l-----~-- 486 (591)
T PRK13616 422 RVIRDPATGQLARTPVDASAV-AS---RVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQ--YAL-----T-- 486 (591)
T ss_pred EEeccCCCceEEEEeccCchh-hh---ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCc--eee-----c--
Confidence 2222223333221 11 2356799999999999755444 477776 3322322 111 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
.......+-...+.++.|.+++. ++ .+..++.-.+|.+.
T Consensus 487 ~~~~l~~~l~~~~~~l~W~~~~~-L~-V~~~~~~~~v~~v~ 525 (591)
T PRK13616 487 NPREVGPGLGDTAVSLDWRTGDS-LV-VGRSDPEHPVWYVN 525 (591)
T ss_pred ccEEeecccCCccccceEecCCE-EE-EEecCCCCceEEEe
Confidence 11111122333468899999998 54 44444444445443
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.029 Score=53.30 Aligned_cols=142 Identities=13% Similarity=0.162 Sum_probs=94.1
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc------EEEEEeCCCeEEEEeCCCCce-eeeEec
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY------ILATGSADKTVALWDLRNLKL-KLHSFE 190 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~------~l~sgs~dg~i~lwd~~~~~~-~~~~~~ 190 (437)
+|.++.....++-.|++ .++.+...+-+.. |+-+.+.|+... -=+.|-.|..|.-||++-... .+....
T Consensus 348 il~~~~~~~~l~klDIE---~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q 423 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIE---RGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQ 423 (644)
T ss_pred EeeCCCCcCcceeeecc---cceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeee
Confidence 44455555667777887 6677777776665 666677775432 124566788999999985332 222222
Q ss_pred cC----CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 191 SH----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 191 ~h----~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
.| .....|.+-..+| .++.||.+|.|++||--. ....+ .+.+-..+|..|..+.+|.++|
T Consensus 424 ~kqy~~k~nFsc~aTT~sG--~IvvgS~~GdIRLYdri~-~~AKT-------------AlPgLG~~I~hVdvtadGKwil 487 (644)
T KOG2395|consen 424 SKQYSTKNNFSCFATTESG--YIVVGSLKGDIRLYDRIG-RRAKT-------------ALPGLGDAIKHVDVTADGKWIL 487 (644)
T ss_pred ccccccccccceeeecCCc--eEEEeecCCcEEeehhhh-hhhhh-------------cccccCCceeeEEeeccCcEEE
Confidence 23 2345677766666 389999999999999733 22111 2567778999999999999777
Q ss_pred EEEeCCCeEEEEeCC
Q psy4571 267 CSVSEDNIMQEYCDS 281 (437)
Q Consensus 267 ~s~~~dg~i~iwd~~ 281 (437)
+|| +..+.+-++.
T Consensus 488 ~Tc--~tyLlLi~t~ 500 (644)
T KOG2395|consen 488 ATC--KTYLLLIDTL 500 (644)
T ss_pred Eec--ccEEEEEEEe
Confidence 665 5566666654
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.64 Score=43.23 Aligned_cols=148 Identities=9% Similarity=0.065 Sum_probs=87.9
Q ss_pred CCEEEEEEC----------CCcEEEEEcCCC-CCCCCeeee--ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 116 ESLFGSVAD----------DQKLMIWDTRSH-NVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 116 ~~~l~~~~~----------dg~v~vwd~~~~-~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..++++|+. .|.|.++++... .....+... ....++|++++-- +.+ |+.+. .+.|.+|++...
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~-lv~~~-g~~l~v~~l~~~ 117 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGR-LVVAV-GNKLYVYDLDNS 117 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTE-EEEEE-TTEEEEEEEETT
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCE-EEEee-cCEEEEEEccCc
Confidence 456666643 288999999852 111122222 2447889999877 443 44333 478999999986
Q ss_pred c-eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 K-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
+ ............+.++... ++ .++.|.....+.++..+...... ..+. .......++++.|-++
T Consensus 118 ~~l~~~~~~~~~~~i~sl~~~--~~-~I~vgD~~~sv~~~~~~~~~~~l----------~~va-~d~~~~~v~~~~~l~d 183 (321)
T PF03178_consen 118 KTLLKKAFYDSPFYITSLSVF--KN-YILVGDAMKSVSLLRYDEENNKL----------ILVA-RDYQPRWVTAAEFLVD 183 (321)
T ss_dssp SSEEEEEEE-BSSSEEEEEEE--TT-EEEEEESSSSEEEEEEETTTE-E----------EEEE-EESS-BEEEEEEEE-S
T ss_pred ccchhhheecceEEEEEEecc--cc-EEEEEEcccCEEEEEEEccCCEE----------EEEE-ecCCCccEEEEEEecC
Confidence 6 3222222233456666655 44 47788887888887555421100 1111 2333557899999877
Q ss_pred CCeEEEEEeCCCeEEEEeCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~ 282 (437)
++ .++.+..+|.+.++....
T Consensus 184 ~~-~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 184 ED-TIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp SS-EEEEEETTSEEEEEEE-S
T ss_pred Cc-EEEEEcCCCeEEEEEECC
Confidence 76 788999999999998763
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.14 Score=46.92 Aligned_cols=210 Identities=11% Similarity=0.018 Sum_probs=105.5
Q ss_pred ceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 107 QDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
+..+++. ++++++... -.-.|.|-|+. ..+.+..+.- .+.. + .-|.++.-|.+-+.||++.-..+....+
T Consensus 98 ~~~~ls~-dgk~~~V~N~TPa~SVtVVDl~---~~kvv~ei~~-PGC~--~-iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk 169 (342)
T PF06433_consen 98 NMFALSA-DGKFLYVQNFTPATSVTVVDLA---AKKVVGEIDT-PGCW--L-IYPSGNRGFSMLCGDGSLLTVTLDADGK 169 (342)
T ss_dssp GGEEE-T-TSSEEEEEEESSSEEEEEEETT---TTEEEEEEEG-TSEE--E-EEEEETTEEEEEETTSCEEEEEETSTSS
T ss_pred cceEEcc-CCcEEEEEccCCCCeEEEEECC---CCceeeeecC-CCEE--E-EEecCCCceEEEecCCceEEEEECCCCC
Confidence 4456666 444444332 23456666766 3344444321 2222 2 2233323488999999999999985443
Q ss_pred eeeEe----ccCCCce-EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec---C----cccc
Q psy4571 185 KLHSF----ESHKDEI-FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG---G----HTAK 252 (437)
Q Consensus 185 ~~~~~----~~h~~~v-~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~---~----h~~~ 252 (437)
..... ..-..++ ..-++...+.. ++--+.+|.|+--|+........ ....... . -.+.
T Consensus 170 ~~~~~t~~F~~~~dp~f~~~~~~~~~~~-~~F~Sy~G~v~~~dlsg~~~~~~---------~~~~~~t~~e~~~~WrPGG 239 (342)
T PF06433_consen 170 EAQKSTKVFDPDDDPLFEHPAYSRDGGR-LYFVSYEGNVYSADLSGDSAKFG---------KPWSLLTDAEKADGWRPGG 239 (342)
T ss_dssp EEEEEEEESSTTTS-B-S--EEETTTTE-EEEEBTTSEEEEEEETTSSEEEE---------EEEESS-HHHHHTTEEE-S
T ss_pred EeEeeccccCCCCcccccccceECCCCe-EEEEecCCEEEEEeccCCccccc---------CcccccCccccccCcCCcc
Confidence 22221 1112222 23334444433 33467899999988877542111 0000000 0 0112
Q ss_pred EEEEEEccCCCeEEEEE--eC-----CC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccc-cCCCCccc
Q psy4571 253 ISDFSWNPNEPWVICSV--SE-----DN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STAS-ESPTPTNS 321 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~--~~-----dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s-~s~d~~~~ 321 (437)
-.-+++++..+++.+.- +. |+ .|=++|+.+++.+..+.+.. ...++..+.+.+ +|.+ ...++.
T Consensus 240 ~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~----~~~Si~Vsqd~~P~L~~~~~~~~~-- 313 (342)
T PF06433_consen 240 WQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEH----PIDSIAVSQDDKPLLYALSAGDGT-- 313 (342)
T ss_dssp SS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEE----EESEEEEESSSS-EEEEEETTTTE--
T ss_pred eeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCC----ccceEEEccCCCcEEEEEcCCCCe--
Confidence 23366766555333322 22 22 36667888888888887632 244677787777 3433 344555
Q ss_pred ccccccccccccccchhhhhhhhhcCCC
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
+.++|..+|+.++++.+-.
T Consensus 314 ---------l~v~D~~tGk~~~~~~~lG 332 (342)
T PF06433_consen 314 ---------LDVYDAATGKLVRSIEQLG 332 (342)
T ss_dssp ---------EEEEETTT--EEEEE---S
T ss_pred ---------EEEEeCcCCcEEeehhccC
Confidence 8999999999998886543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.26 Score=49.61 Aligned_cols=192 Identities=14% Similarity=0.078 Sum_probs=98.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe---
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT--- 173 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~--- 173 (437)
+..-.+++... +.++++|+.| .++..||....+ ...+..+............ +|. +.++|+.||.
T Consensus 322 ~r~~~~~~~~~--~~lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~M~~~R~~~~v~~l--~g~-iYavGG~dg~~~l 395 (571)
T KOG4441|consen 322 PRCRVGVAVLN--GKLYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAPMNTKRSDFGVAVL--DGK-LYAVGGFDGEKSL 395 (571)
T ss_pred ccccccEEEEC--CEEEEEccccCCCcccceEEEecCCCCc-eeccCCccCccccceeEEE--CCE-EEEEecccccccc
Confidence 33444555554 6888999998 357788887553 3333333222222211111 244 7899999865
Q ss_pred --EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC------eEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 174 --VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR------RLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 174 --i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
+..||.++.+... ......+....+...-+..+.++||.|+ ++..||..+..-.... .+...
T Consensus 396 ~svE~YDp~~~~W~~--va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~--------~M~~~ 465 (571)
T KOG4441|consen 396 NSVECYDPVTNKWTP--VAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIA--------PMNTR 465 (571)
T ss_pred ccEEEecCCCCcccc--cCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecC--------Ccccc
Confidence 7778887755421 1112223333333222334788888554 4678888776432220 00011
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCe-----EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNI-----MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
..++. ++. -++. +.+.||.|+. |..||..+.+-...-... ......-...-++...+.|+.++..
T Consensus 466 R~~~g-----~a~-~~~~-iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~---~~rs~~g~~~~~~~ly~vGG~~~~~ 535 (571)
T KOG4441|consen 466 RSGFG-----VAV-LNGK-IYVVGGFDGTSALSSVERYDPETNQWTMVAPMT---SPRSAVGVVVLGGKLYAVGGFDGNN 535 (571)
T ss_pred cccce-----EEE-ECCE-EEEECCccCCCccceEEEEcCCCCceeEcccCc---cccccccEEEECCEEEEEecccCcc
Confidence 11221 111 1444 7888887763 677888776443321111 1111111234466777777777653
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=60.52 Aligned_cols=101 Identities=22% Similarity=0.374 Sum_probs=72.9
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
...++.|+..|.+...|.... ..+...-..-.++|++++|+.+|. +++.|-.+|.|.+||+..++. ++.+..|..+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~n--L~~~~~ne~v~~~Vtsvafn~dg~-~l~~G~~~G~V~v~D~~~~k~-l~~i~e~~ap 174 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGN--LGPLHQNERVQGPVTSVAFNQDGS-LLLAGLGDGHVTVWDMHRAKI-LKVITEHGAP 174 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcc--cchhhcCCccCCcceeeEecCCCc-eeccccCCCcEEEEEccCCcc-eeeeeecCCc
Confidence 456888999999999888732 222223233467999999999999 599999999999999998655 7777767666
Q ss_pred eEEEEE---cCCCCcEEEEEeCCCeEEEEEc
Q psy4571 196 IFQVQW---SPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 196 v~~v~~---~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
.+.+-+ ..++. .+.++...|. +|.+
T Consensus 175 ~t~vi~v~~t~~nS-~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 175 VTGVIFVGRTSQNS-KLLTSDTGGS--FWKL 202 (1206)
T ss_pred cceEEEEEEeCCCc-EEEEccCCCc--eEEE
Confidence 555443 34454 4778777775 5554
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.06 Score=51.21 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=75.2
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc------------------------------------------eeeeE
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLK------------------------------------------LKLHS 188 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~------------------------------------------~~~~~ 188 (437)
.|+.+.|+++... |++|...|.|.||.....+ .+...
T Consensus 3 ~v~~vs~a~~t~E-lav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPETLE-LAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTTTE-EEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCCce-EEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 5889999998774 9999999999998653211 11222
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc-----CC-
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-----NE- 262 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-----~~- 262 (437)
+....++|++++.+.-| ++|.|..+|.+.|.|+|............ ..........++++.|.. |+
T Consensus 82 ~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~------~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRE------SFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp E---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--------T-SS----EEEEEEEEEE-TTSSS
T ss_pred eeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccc------cccccccccCeeEEEEEEEecCCCcc
Confidence 33446889999998666 69999999999999998864332200000 000112234678888862 22
Q ss_pred -CeEEEEEeCCCeEEEEeCC
Q psy4571 263 -PWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 263 -~~~l~s~~~dg~i~iwd~~ 281 (437)
.-+++.|...|.+.+|.+.
T Consensus 154 SSi~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEEEEEETTSEEEEEEEE
T ss_pred cceEEEEEeCCCCEEEEEEe
Confidence 1356788888999999875
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.015 Score=49.36 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=65.6
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe-CCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
.+..+++|+.+|.|.+|+.... +........-...|.+.--. .++. +..+++.||.|+.|+....+. +.....|.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~--g~~~d~~~s~~e~i~~~Ip~~~~~~-~~c~~~~dg~ir~~n~~p~k~-~g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLE--GAHSDRVCSGEESIDLGIPNGRDSS-LGCVGAQDGRIRACNIKPNKV-LGYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCcc--chHHHhhhcccccceeccccccccc-eeEEeccCCceeeeccccCce-eeeecccc
Confidence 4567889999999999988732 11111111222333333222 2233 689999999999999997665 54455566
Q ss_pred -CceEEEEEcCCCCcEEEEE--eCCCeEEEEEcCCC
Q psy4571 194 -DEIFQVQWSPHNETILASS--GTDRRLHVWDLSKI 226 (437)
Q Consensus 194 -~~v~~v~~~p~~~~~l~sg--~~dg~i~vwd~~~~ 226 (437)
.++.....+..++ +++.+ |.|..++.|++...
T Consensus 145 ~~~~e~~ivv~sd~-~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 145 FESGEELIVVGSDE-FLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred CCCcceeEEecCCc-eEEeeccccchhhhhcchhhh
Confidence 4555555555555 35565 66677777776553
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.41 E-value=1 Score=43.61 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=89.2
Q ss_pred eEEEEEeeecccccc--CCC-cceEEeeCCCCCEEEEEECC----------CcEEEEEcCCCCCCCCeeeeccCCCC--e
Q psy4571 88 SILFFEIIFTQNFPF--PLS-RQDVAWHLLHESLFGSVADD----------QKLMIWDTRSHNVSKPSHTVDAHTAE--V 152 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~--~~~-v~~~~~sp~~~~~l~~~~~d----------g~v~vwd~~~~~~~~~~~~~~~h~~~--v 152 (437)
.++++|+..++.... ... ...+.|.+++..++.+...+ ..|+.|++.+... .-...+.+.... .
T Consensus 151 ~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~-~d~lvfe~~~~~~~~ 229 (414)
T PF02897_consen 151 TLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQS-EDELVFEEPDEPFWF 229 (414)
T ss_dssp EEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GG-G-EEEEC-TTCTTSE
T ss_pred EEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChH-hCeeEEeecCCCcEE
Confidence 366666554433221 111 12399999545555554333 1377788775421 212334333333 5
Q ss_pred EEEEEeCCCCcEEEEEeCCC---eEEEEeCCCC---ceeeeEeccCCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEc
Q psy4571 153 NCLSFNPYSEYILATGSADK---TVALWDLRNL---KLKLHSFESHKDEIFQVQWSPHNETILASSG---TDRRLHVWDL 223 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~ 223 (437)
..+..+++++++++...... .+.+.|+... ......+......+....-+..+. +++... .++.|...++
T Consensus 230 ~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~-~yi~Tn~~a~~~~l~~~~l 308 (414)
T PF02897_consen 230 VSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDR-LYILTNDDAPNGRLVAVDL 308 (414)
T ss_dssp EEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTE-EEEEE-TT-TT-EEEEEET
T ss_pred EEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCE-EEEeeCCCCCCcEEEEecc
Confidence 78889999998776665544 4788888864 222333433344443333333443 344332 2456766777
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCC
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDS 281 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~ 281 (437)
........ ...+..|...+.--.+...+.++++..-.++ .|+++++.
T Consensus 309 ~~~~~~~~-----------~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 309 ADPSPAEW-----------WTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp TSTSGGGE-----------EEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred cccccccc-----------eeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECC
Confidence 66432110 1123344443332333345665777766554 47788888
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.01 Score=60.80 Aligned_cols=134 Identities=9% Similarity=0.056 Sum_probs=91.2
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce
Q psy4571 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK 287 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 287 (437)
.++.|+..|.+...|+...-.. +..-..-.++|++++|+.+|. +++.|-.+|.|.+||+..++..+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~-------------~~~ne~v~~~Vtsvafn~dg~-~l~~G~~~G~V~v~D~~~~k~l~ 166 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGP-------------LHQNERVQGPVTSVAFNQDGS-LLLAGLGDGHVTVWDMHRAKILK 166 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccch-------------hhcCCccCCcceeeEecCCCc-eeccccCCCcEEEEEccCCccee
Confidence 5788888888988888763111 111123357899999999999 78899999999999999999999
Q ss_pred eeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCC
Q psy4571 288 TMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 288 ~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~ 359 (437)
.+........+++.+.+..++..+.++...|. +|.-.+.+. .-+..+.+...-+.|..+++.....-|
T Consensus 167 ~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv~nk~--~L~~~~~kskcl~sg~~g~Vis~s~i~ 234 (1206)
T KOG2079|consen 167 VITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLVFNKA--LLNMNTDKSKCLLSGKNGEVISASPIS 234 (1206)
T ss_pred eeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEEechh--hhcccchHHHHhhcCCCCceEecccCC
Confidence 99877777778888888888887888777775 333222221 333344444444455444444444333
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.33 Score=47.00 Aligned_cols=221 Identities=11% Similarity=0.101 Sum_probs=107.0
Q ss_pred ceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEE-EcCCCCCCCCeeeec
Q psy4571 68 FLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIW-DTRSHNVSKPSHTVD 146 (437)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vw-d~~~~~~~~~~~~~~ 146 (437)
.+..+.++|.++.+...++|.-.++.....+.. ........+|.+ .+.+|+-..+++|.|+ +.+. .....+.
T Consensus 34 ~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k-~~G~g~~~vw~~--~n~yAv~~~~~~I~I~kn~~~----~~~k~i~ 106 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNK-AFGSGLSFVWSS--RNRYAVLESSSTIKIYKNFKN----EVVKSIK 106 (443)
T ss_dssp --SEEEE-TTSSEEEEEETTEEEEEETTTTEEE-EEEE-SEEEE-T--SSEEEEE-TTS-EEEEETTEE-----TT----
T ss_pred CCeeEEECCCCCEEEEEcCCEEEEEEccCCccc-ccCceeEEEEec--CccEEEEECCCeEEEEEcCcc----ccceEEc
Confidence 366777889999999999999888873322221 234556788998 4568888888999996 4431 1111221
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 147 AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 147 ~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
. ...+..|-. |. +|+..+.+ .|.+||+.+.+. +..+.. .+|..+.|++++.. ++..+. ..+.+++....
T Consensus 107 ~-~~~~~~If~---G~-LL~~~~~~-~i~~yDw~~~~~-i~~i~v--~~vk~V~Ws~~g~~-val~t~-~~i~il~~~~~ 175 (443)
T PF04053_consen 107 L-PFSVEKIFG---GN-LLGVKSSD-FICFYDWETGKL-IRRIDV--SAVKYVIWSDDGEL-VALVTK-DSIYILKYNLE 175 (443)
T ss_dssp --SS-EEEEE----SS-SEEEEETT-EEEEE-TTT--E-EEEESS---E-EEEEE-TTSSE-EEEE-S--SEEEEEE-HH
T ss_pred C-CcccceEEc---Cc-EEEEECCC-CEEEEEhhHcce-eeEEec--CCCcEEEEECCCCE-EEEEeC-CeEEEEEecch
Confidence 1 123444433 66 46666554 899999999665 766653 34899999999985 666554 46777765442
Q ss_pred CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
.... ...++-...+.....-...|.+..|..+ -++.|... .++- +..|+. ..+.. -.....-+.+.|
T Consensus 176 ~~~~---~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~--~lkY--l~~Ge~-~~i~~---ld~~~yllgy~~ 242 (443)
T PF04053_consen 176 AVAA---IPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN--HLKY--LVNGET-GIIAH---LDKPLYLLGYLP 242 (443)
T ss_dssp HHHH---BTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT--EEEE--EETTEE-EEEEE----SS--EEEEEET
T ss_pred hccc---ccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC--eEEE--EEcCCc-ceEEE---cCCceEEEEEEc
Confidence 0000 0011111123333333567888888665 24544433 5554 333321 12211 112233335555
Q ss_pred CCCcccccCCCCc
Q psy4571 307 TASSTASESPTPT 319 (437)
Q Consensus 307 ~g~~l~s~s~d~~ 319 (437)
....+.....+..
T Consensus 243 ~~~~ly~~Dr~~~ 255 (443)
T PF04053_consen 243 KENRLYLIDRDGN 255 (443)
T ss_dssp TTTEEEEE-TT--
T ss_pred cCCEEEEEECCCC
Confidence 5555555555555
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.52 Score=43.84 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=71.1
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
..+.+|++++-.. +. |+++. ++.|.+|++...+......... ....+.++... +. .++.|.....+.++..+
T Consensus 86 ~~~g~V~ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~-~~~~i~sl~~~--~~-~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 86 EVKGPVTAICSFN--GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYD-SPFYITSLSVF--KN-YILVGDAMKSVSLLRYD 157 (321)
T ss_dssp EESS-EEEEEEET--TE-EEEEE-TTEEEEEEEETTSSEEEEEEE--BSSSEEEEEEE--TT-EEEEEESSSSEEEEEEE
T ss_pred eecCcceEhhhhC--CE-EEEee-cCEEEEEEccCcccchhhheec-ceEEEEEEecc--cc-EEEEEEcccCEEEEEEE
Confidence 3567788887763 44 44444 5789999998543111122222 22366677665 45 48899988888888554
Q ss_pred CCceeeeEe--ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 181 NLKLKLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 181 ~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
.....+..+ ......++++.|-++++ .++.+..+|.+.++....
T Consensus 158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~-~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 158 EENNKLILVARDYQPRWVTAAEFLVDED-TIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp TTTE-EEEEEEESS-BEEEEEEEE-SSS-EEEEEETTSEEEEEEE-S
T ss_pred ccCCEEEEEEecCCCccEEEEEEecCCc-EEEEEcCCCeEEEEEECC
Confidence 322212222 22355688999987776 588999999999998864
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.67 Score=41.24 Aligned_cols=177 Identities=10% Similarity=0.125 Sum_probs=103.5
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
....+.++.|+|+. +.|++..+...-.|+=.. .+..++++. + -...-.|++..+|.+ .++--.++.+.++.+
T Consensus 84 ~~~nvS~LTynp~~-rtLFav~n~p~~iVElt~---~GdlirtiPL~g-~~DpE~Ieyig~n~f-vi~dER~~~l~~~~v 157 (316)
T COG3204 84 ETANVSSLTYNPDT-RTLFAVTNKPAAIVELTK---EGDLIRTIPLTG-FSDPETIEYIGGNQF-VIVDERDRALYLFTV 157 (316)
T ss_pred ccccccceeeCCCc-ceEEEecCCCceEEEEec---CCceEEEecccc-cCChhHeEEecCCEE-EEEehhcceEEEEEE
Confidence 34568999999954 455455555554454333 244444432 2 223456888877774 666666888888877
Q ss_pred CCCce---------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 180 RNLKL---------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 180 ~~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
..... ++.....-+.....++|.|.+.. |..+-.-.-+.||................ +.... .---
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~-l~~aKEr~P~~I~~~~~~~~~l~~~~~~~--~~~~~--~~f~ 232 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHR-LFVAKERNPIGIFEVTQSPSSLSVHASLD--PTADR--DLFV 232 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCCCce-EEEEEccCCcEEEEEecCCcccccccccC--ccccc--ceEe
Confidence 65322 11112222566789999999886 55555566677777764332211110000 00000 0001
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
..|+++.|++....+++-+..++.+.-.|.... .+..+.
T Consensus 233 ~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~-~~~~ls 271 (316)
T COG3204 233 LDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE-VIELLS 271 (316)
T ss_pred eccccceecCCCCcEEEEecCCceEEEEecCCC-eeeeEE
Confidence 357889999877778988889999888887754 344443
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0044 Score=52.42 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=53.9
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEE
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ 198 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~ 198 (437)
+...+.||.|+-+++.... ...+.-..|...-.-+ .-+.. ++.|+.+|.|.+|...-..........-...|-+
T Consensus 33 l~~~sa~~~v~~~~~~k~k--~s~rse~~~~e~~~v~---~~~~~-~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~ 106 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHK--ESCRSERFIDEGQRVV---TASAK-LMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDL 106 (238)
T ss_pred hccccCCcccccchhhhhh--hhhhhhhhhhcceeec---ccCce-EEeecccceEEEecCCccchHHHhhhccccccee
Confidence 4455667888777776321 0111111122111111 22343 9999999999999987322211111111222222
Q ss_pred EEEcCCCCc--EEEEEeCCCeEEEEEcCCCC
Q psy4571 199 VQWSPHNET--ILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 199 v~~~p~~~~--~l~sg~~dg~i~vwd~~~~~ 227 (437)
. -|.++. +..+++.||.|+.|++.-.+
T Consensus 107 ~--Ip~~~~~~~~c~~~~dg~ir~~n~~p~k 135 (238)
T KOG2444|consen 107 G--IPNGRDSSLGCVGAQDGRIRACNIKPNK 135 (238)
T ss_pred c--cccccccceeEEeccCCceeeeccccCc
Confidence 2 233332 68899999999999987653
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.014 Score=36.52 Aligned_cols=33 Identities=12% Similarity=0.322 Sum_probs=29.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
..+..|.+++|+| ..+++|.|+.+|.|.++.+.
T Consensus 9 ~l~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 9 NLPSRVSCMSWCP-TMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCCcEEEEEECC-CCCEEEEEECCCeEEEEECC
Confidence 3456789999999 68899999999999999985
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.96 Score=41.50 Aligned_cols=211 Identities=8% Similarity=-0.043 Sum_probs=111.6
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
.-.|.+..+.++.+--..+.|.-|+..++ + ...+. +.+.+.++..-..+.. |+++. . -+.+++.+++.. ..
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g---~-~~~~~-~p~~~~~~~~~d~~g~-Lv~~~-~-g~~~~~~~~~~~-~t 99 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETG---K-KRVFP-SPGGFSSGALIDAGGR-LIACE-H-GVRLLDPDTGGK-IT 99 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcC---c-eEEEE-CCCCcccceeecCCCe-EEEEc-c-ccEEEeccCCce-eE
Confidence 34567744556666667788888988732 1 22332 3334455555544553 44443 2 356666654333 12
Q ss_pred Eec----cC-CCceEEEEEcCCCCcEEEEEeCC------------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 188 SFE----SH-KDEIFQVQWSPHNETILASSGTD------------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 188 ~~~----~h-~~~v~~v~~~p~~~~~l~sg~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.+. +. ....+.+...|+|.. . .+... |.|+.+|. .+ ........+-
T Consensus 100 ~~~~~~~~~~~~r~ND~~v~pdG~~-w-fgt~~~~~~~~~~~~~~G~lyr~~p-~g--------------~~~~l~~~~~ 162 (307)
T COG3386 100 LLAEPEDGLPLNRPNDGVVDPDGRI-W-FGDMGYFDLGKSEERPTGSLYRVDP-DG--------------GVVRLLDDDL 162 (307)
T ss_pred EeccccCCCCcCCCCceeEcCCCCE-E-EeCCCccccCccccCCcceEEEEcC-CC--------------CEEEeecCcE
Confidence 211 11 134567888899873 3 33222 11222222 11 1122233444
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCCcee--eeeeecccCCceeeeecCCCCcccccCCCC-ccccccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSDTKT--MRLDSIRSNGGISSTASPTASSTASESPTP-TNSVHEK 325 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~--~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~-~~~~~~~ 325 (437)
..-+.|+||||++.+.++=+..+.|.-|++.. +..... ...........=.++...+|.+.+++-.++ .
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~------ 236 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGR------ 236 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCce------
Confidence 45678999999986666667778999888763 221111 111111223333345666777665444333 3
Q ss_pred ccccccccccchhhhhhhhhcCCCccccccC
Q psy4571 326 NYWQGLVLFDILVCEEQRQLLGTEEESSDRH 356 (437)
Q Consensus 326 ~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~ 356 (437)
+..|+-. |+++..+.-....+++.+
T Consensus 237 -----v~~~~pd-G~l~~~i~lP~~~~t~~~ 261 (307)
T COG3386 237 -----VVRFNPD-GKLLGEIKLPVKRPTNPA 261 (307)
T ss_pred -----EEEECCC-CcEEEEEECCCCCCccce
Confidence 6778877 887777766533444444
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.028 Score=35.18 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=28.3
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...|..++|+|..+ ++|.+..||.|.++.++
T Consensus 11 ~~~v~~~~w~P~md-LiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMD-LIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCC-EEEEEECCCeEEEEECC
Confidence 45799999999999 99999999999999983
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.52 Score=45.61 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=74.4
Q ss_pred eEEEEEeCCCCcEEEEEeCCCe----EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC----------Ce
Q psy4571 152 VNCLSFNPYSEYILATGSADKT----VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RR 217 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~----i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d----------g~ 217 (437)
+...+++|+|++++++-+..|. |++.|+++++.....+... ....+.|.++++.++.+...+ ..
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 4467889999986666566555 9999999976533233321 123399999998766665333 23
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCC
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTD 283 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~ 283 (437)
|+.|.+.+..... .+++.-.........+..+++++++++..... ..+.+.|+..+
T Consensus 204 v~~~~~gt~~~~d----------~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 204 VYRHKLGTPQSED----------ELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEEEETTS-GGG-----------EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEEEECCCChHhC----------eeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 7778876643221 23333333332367888999999777666544 34778888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.54 Score=45.82 Aligned_cols=122 Identities=11% Similarity=0.190 Sum_probs=76.3
Q ss_pred CCcceEEeeCCC---CCEEEEEECCCcEEEEEcCC--CCCCCCeeeeccC-CC----CeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 104 LSRQDVAWHLLH---ESLFGSVADDQKLMIWDTRS--HNVSKPSHTVDAH-TA----EVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 104 ~~v~~~~~sp~~---~~~l~~~~~dg~v~vwd~~~--~~~~~~~~~~~~h-~~----~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
..|..+.|.|-. ..-|++......|.||.+.. .+..+.+.....+ .. --..+.|+|... +|+.-.....
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~-iL~VLT~~dv 135 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKA-ILTVLTARDV 135 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCc-eEEEEecCce
Confidence 457889998842 22344566678899999862 2222322221111 11 124567999888 5776666655
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
-.+.+++.....+..--...+.|.|.+|.+||++++++-+..=.-++||-...
T Consensus 136 SV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 136 SVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred eEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 56677775444344333456889999999999986666665556778886543
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.055 Score=51.52 Aligned_cols=117 Identities=17% Similarity=0.152 Sum_probs=81.0
Q ss_pred cCCCcceEEeeCCC-------CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC----CCCeEEEEEeCCCCcEEEEEeC
Q psy4571 102 FPLSRQDVAWHLLH-------ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH----TAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 102 ~~~~v~~~~~sp~~-------~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
+...|+-+.+.|+. ...| .|-.+..|.-||++-.... .+...++| .....|.+-..+|. ++.||.
T Consensus 374 ~~~di~mv~~t~d~K~~Ql~~e~Tl-vGLs~n~vfriDpRv~~~~-kl~~~q~kqy~~k~nFsc~aTT~sG~--IvvgS~ 449 (644)
T KOG2395|consen 374 FEDDINMVDITPDFKFAQLTSEQTL-VGLSDNSVFRIDPRVQGKN-KLAVVQSKQYSTKNNFSCFATTESGY--IVVGSL 449 (644)
T ss_pred ccCCcceeeccCCcchhcccccccE-EeecCCceEEecccccCcc-eeeeeeccccccccccceeeecCCce--EEEeec
Confidence 34446666676642 1233 4777888999999853321 22222333 23566777666664 999999
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
+|.|+|||- .+......+.+...+|..|..+.+|+++|+|| +..+.+-++.-
T Consensus 450 ~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t~~ 501 (644)
T KOG2395|consen 450 KGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLIDTLI 501 (644)
T ss_pred CCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEEEec
Confidence 999999998 44554666788889999999999999766655 66787877654
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=95.87 E-value=1.6 Score=40.94 Aligned_cols=209 Identities=13% Similarity=0.091 Sum_probs=94.5
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe--CCCCcEEEEEeC----------------
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN--PYSEYILATGSA---------------- 170 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~~l~sgs~---------------- 170 (437)
..++|. .+.++-...+..|+-.|+++ .+....+.....-+-...|. .++. .+.|.+
T Consensus 86 ~~~s~~-~~~~~Yv~~~~~l~~vdL~T---~e~~~vy~~p~~~~g~gt~v~n~d~t--~~~g~e~~~~d~~~l~~~~~f~ 159 (386)
T PF14583_consen 86 GFLSPD-DRALYYVKNGRSLRRVDLDT---LEERVVYEVPDDWKGYGTWVANSDCT--KLVGIEISREDWKPLTKWKGFR 159 (386)
T ss_dssp -EE-TT-SSEEEEEETTTEEEEEETTT-----EEEEEE--TTEEEEEEEEE-TTSS--EEEEEEEEGGG-----SHHHHH
T ss_pred eEEecC-CCeEEEEECCCeEEEEECCc---CcEEEEEECCcccccccceeeCCCcc--EEEEEEEeehhccCccccHHHH
Confidence 445564 34443344456777788874 33333333444445445564 3344 333321
Q ss_pred -------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC---CCe-EEEEEcCCCCCCCCCCCCCCCC
Q psy4571 171 -------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT---DRR-LHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 171 -------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~---dg~-i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
...|.--|+++++ ...+..-...+..+.|+|..+.+++-|-. |.. -|+|-+++......
T Consensus 160 e~~~a~p~~~i~~idl~tG~--~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~-------- 229 (386)
T PF14583_consen 160 EFYEARPHCRIFTIDLKTGE--RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVK-------- 229 (386)
T ss_dssp HHHHC---EEEEEEETTT----EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---E--------
T ss_pred HHHhhCCCceEEEEECCCCc--eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcce--------
Confidence 2445556777654 33333345667889999998876665532 221 36676665432211
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEE----eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSV----SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
++... .-...+..=-|.|||..+..-+ +.+..|.-+|+.+++....... ........++||++++.-+
T Consensus 230 --~v~~~-~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~-----p~~~H~~ss~Dg~L~vGDG 301 (386)
T PF14583_consen 230 --KVHRR-MEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM-----PWCSHFMSSPDGKLFVGDG 301 (386)
T ss_dssp --ESS----TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE------SEEEEEE-TTSSEEEEEE
T ss_pred --eeecC-CCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC-----CceeeeEEcCCCCEEEecC
Confidence 11111 1123445556899998554433 2355678888888765332221 1233446689999887666
Q ss_pred CCCcccccc-----cccccccccccchhhhh
Q psy4571 316 PTPTNSVHE-----KNYWQGLVLFDILVCEE 341 (437)
Q Consensus 316 ~d~~~~~~~-----~~~~~~i~~wd~~~~~~ 341 (437)
.|.-..+.+ .....-+++++...++.
T Consensus 302 ~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~ 332 (386)
T PF14583_consen 302 GDAPVDVADAGGYKIENDPWIYLFDVEAGRF 332 (386)
T ss_dssp -------------------EEEEEETTTTEE
T ss_pred CCCCccccccccceecCCcEEEEeccccCce
Confidence 553222211 11112367778776554
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.95 Score=44.84 Aligned_cols=164 Identities=10% Similarity=0.066 Sum_probs=84.6
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC------CeE--EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA------EVN--CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~------~v~--~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
..+..++.++.|.-.|..++ +.+-....... .+. .+... ++. .++.++.++.|.-+|.++++. +..
T Consensus 62 g~vy~~~~~g~l~AlD~~tG---~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~-~V~v~~~~g~v~AlD~~TG~~-~W~ 135 (488)
T cd00216 62 GDMYFTTSHSALFALDAATG---KVLWRYDPKLPADRGCCDVVNRGVAYW-DPR-KVFFGTFDGRLVALDAETGKQ-VWK 135 (488)
T ss_pred CEEEEeCCCCcEEEEECCCC---hhhceeCCCCCccccccccccCCcEEc-cCC-eEEEecCCCeEEEEECCCCCE-eee
Confidence 45556777899999998854 33322221111 010 11111 214 377888999999999999776 444
Q ss_pred eccCCCc-----eE-EEEEcCCCCcEEEEEe---------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe------c
Q psy4571 189 FESHKDE-----IF-QVQWSPHNETILASSG---------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH------G 247 (437)
Q Consensus 189 ~~~h~~~-----v~-~v~~~p~~~~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~------~ 247 (437)
....... +. ...+. +. +++.++ .++.+..+|..+++..-........+ ..+... .
T Consensus 136 ~~~~~~~~~~~~i~ssP~v~--~~-~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~-~~~~~~~~~~~~~ 211 (488)
T cd00216 136 FGNNDQVPPGYTMTGAPTIV--KK-LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDP-NAFPTWGPDRQMW 211 (488)
T ss_pred ecCCCCcCcceEecCCCEEE--CC-EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCc-CCCCCCCCCccee
Confidence 4322110 11 11222 22 244443 36788999998887554422110000 000000 0
Q ss_pred Ccc-ccE-EEEEEccCCCeEEEEEeCCC------------------eEEEEeCCCCCCceeeee
Q psy4571 248 GHT-AKI-SDFSWNPNEPWVICSVSEDN------------------IMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 248 ~h~-~~v-~~l~~~p~~~~~l~s~~~dg------------------~i~iwd~~~~~~~~~~~~ 291 (437)
.+. ..+ ...++.+.+. +++.++.|+ .+.-.|..+|+....+..
T Consensus 212 ~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~ 274 (488)
T cd00216 212 GPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQT 274 (488)
T ss_pred cCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeC
Confidence 000 011 1234444455 555666554 799999999988777653
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.67 E-value=1.5 Score=39.17 Aligned_cols=157 Identities=12% Similarity=0.125 Sum_probs=87.3
Q ss_pred CcceEEeeCCCCCEEEEEE-CC--CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe-CC
Q psy4571 105 SRQDVAWHLLHESLFGSVA-DD--QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD-LR 180 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~-~d--g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd-~~ 180 (437)
.+...+++++ +..+|... .+ ..++++... ..... .+. ...+..-.|++++. +.+....+...+++. ..
T Consensus 25 ~~~s~AvS~d-g~~~A~v~~~~~~~~L~~~~~~--~~~~~--~~~--g~~l~~PS~d~~g~-~W~v~~~~~~~~~~~~~~ 96 (253)
T PF10647_consen 25 DVTSPAVSPD-GSRVAAVSEGDGGRSLYVGPAG--GPVRP--VLT--GGSLTRPSWDPDGW-VWTVDDGSGGVRVVRDSA 96 (253)
T ss_pred cccceEECCC-CCeEEEEEEcCCCCEEEEEcCC--Cccee--ecc--CCccccccccCCCC-EEEEEcCCCceEEEEecC
Confidence 5778999995 55554444 23 344444433 11121 112 23678889999976 566666666667764 33
Q ss_pred CCceeeeEecc--CCCceEEEEEcCCCCcEEEEE--eCCCeEEEEEcCCCCCC--CCCCCCCCCCCceEEEecCccccEE
Q psy4571 181 NLKLKLHSFES--HKDEIFQVQWSPHNETILASS--GTDRRLHVWDLSKIGEE--QSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 181 ~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg--~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.+......... -...|..++++|||..+.+.. ..++.|.+=-+.....- ..+ ...+.........+.
T Consensus 97 ~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l-------~~~~~~~~~~~~~v~ 169 (253)
T PF10647_consen 97 SGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRL-------TGPRRVAPPLLSDVT 169 (253)
T ss_pred CCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCccee-------ccceEecccccCcce
Confidence 32221222221 122899999999999754444 23567777665433222 110 011222223356889
Q ss_pred EEEEccCCCeEEEEE-eCCCeEEE
Q psy4571 255 DFSWNPNEPWVICSV-SEDNIMQE 277 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~-~~dg~i~i 277 (437)
.++|.+++. +++.+ ..++.+..
T Consensus 170 ~v~W~~~~~-L~V~~~~~~~~~~~ 192 (253)
T PF10647_consen 170 DVAWSDDST-LVVLGRSAGGPVVR 192 (253)
T ss_pred eeeecCCCE-EEEEeCCCCCceeE
Confidence 999999998 55444 44443433
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.65 E-value=1.6 Score=39.40 Aligned_cols=218 Identities=13% Similarity=0.113 Sum_probs=118.5
Q ss_pred CCcceEEEeeccCceEeeec-CC---------CceeEEEecCCCCeEEEecCceEEEEEeeecccc--------------
Q psy4571 45 PFDDAVEERVINEEYKIWKK-NT---------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF-------------- 100 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~-~~---------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~-------------- 100 (437)
..++.|+.|..+| +-+++. +. ..+..+...+..+.+.+..|+.+.++++......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~ 83 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSL 83 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccc
Confidence 4577888887777 566664 11 2255566667777778888899999985432211
Q ss_pred --ccCCCcceEEee---CCCCCEEEEEECCCcEEEEEcCCCC-CC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 101 --PFPLSRQDVAWH---LLHESLFGSVADDQKLMIWDTRSHN-VS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 101 --~~~~~v~~~~~s---p~~~~~l~~~~~dg~v~vwd~~~~~-~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
..+..-.+..|. ...+...++......|.+|...... .. +..+.+. -...+.+++|. +. .++.|..++
T Consensus 84 ~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~-~i~v~~~~~- 158 (275)
T PF00780_consen 84 PTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GN-KICVGTSKG- 158 (275)
T ss_pred cccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CC-EEEEEeCCc-
Confidence 112222233333 2233333344445589999887531 22 3444443 34678999999 34 377776554
Q ss_pred EEEEeCCCCceeeeEe--cc----------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 174 VALWDLRNLKLKLHSF--ES----------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~--~~----------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
..+.|+.++.. ...+ .. ...++..+... ++. +|++ .|..-...|.... ....
T Consensus 159 f~~idl~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e-~Ll~--~~~~g~fv~~~G~-~~r~---------- 222 (275)
T PF00780_consen 159 FYLIDLNTGSP-SELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNE-FLLC--YDNIGVFVNKNGE-PSRK---------- 222 (275)
T ss_pred eEEEecCCCCc-eEEeCccCCcchhhhcccCCCceEEEEeC-Cce-EEEE--ecceEEEEcCCCC-cCcc----------
Confidence 77889886442 1111 11 11233334443 344 3443 2444444454332 1111
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
....+. ..+.++++ ..++++ ..+. +.|.||++.+++.++.+..
T Consensus 223 ~~i~W~---~~p~~~~~--~~pyli-~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 223 STIQWS---SAPQSVAY--SSPYLI-AFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred cEEEcC---CchhEEEE--ECCEEE-EECC-CEEEEEECcCCcEEEEEEC
Confidence 011122 24455666 445444 4444 5699999999988888764
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.63 E-value=1.1 Score=40.03 Aligned_cols=155 Identities=12% Similarity=0.052 Sum_probs=86.2
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE-cCCCCCC
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD-LSKIGEE 229 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd-~~~~~~~ 229 (437)
.+.+.+.++++..+.+....++.-.||-...+........ ...+..-.|++++. +.+....+...+++. ...+...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~--g~~l~~PS~d~~g~-~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLT--GGSLTRPSWDPDGW-VWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeecc--CCccccccccCCCC-EEEEEcCCCceEEEEecCCCcce
Confidence 6889999999996334442333333443333333122222 23678889999976 555555566666664 2222211
Q ss_pred CCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE--eCCCeEEEEeCCCCCCc------eeeeeeecccCCcee
Q psy4571 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV--SEDNIMQEYCDSTDSDT------KTMRLDSIRSNGGIS 301 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~ 301 (437)
.. .+. ...-...|+.+.++|||.++.+.. ..++.|.+=-+.....- ............+..
T Consensus 102 ~~----------~v~-~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~ 170 (253)
T PF10647_consen 102 PV----------EVD-WPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTD 170 (253)
T ss_pred eE----------Eec-ccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCccee
Confidence 10 000 111112899999999999665555 34577777655422111 111121112345667
Q ss_pred eeecCCCCcccccCCCCc
Q psy4571 302 STASPTASSTASESPTPT 319 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~ 319 (437)
++|.+++.+++.+...+.
T Consensus 171 v~W~~~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 171 VAWSDDSTLVVLGRSAGG 188 (253)
T ss_pred eeecCCCEEEEEeCCCCC
Confidence 899999998887765543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.37 Score=45.37 Aligned_cols=107 Identities=12% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
..+|.++.||+ ++..+|+--.+++|.+++...++.. ......+..+..|....|+..-. +|--+..| +-+|....
T Consensus 66 ~G~I~SIkFSl-DnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e--~A~i~~~G-~e~y~v~p 141 (657)
T KOG2377|consen 66 KGEIKSIKFSL-DNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE--IAFITDQG-IEFYQVLP 141 (657)
T ss_pred CCceeEEEecc-CcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee--EEEEecCC-eEEEEEch
Confidence 35788999999 6889999999999999998533221 12223334455689999987633 66555554 67777766
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
.+..++..+.|+..|.=..|.|+.+-+|.+.+
T Consensus 142 ekrslRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 142 EKRSLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred hhhhhhhhhhcccCccEEEEccccceEeeecc
Confidence 55556677778888888888888764444444
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.27 Score=49.40 Aligned_cols=192 Identities=10% Similarity=0.002 Sum_probs=90.6
Q ss_pred CCCEEEEEECC------CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCc
Q psy4571 115 HESLFGSVADD------QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLK 183 (437)
Q Consensus 115 ~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~ 183 (437)
++.+++.|+.+ ..+..||+.+.. ...+..+....... +++.. +|. +.+.|+.++ ++..||..+..
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~-W~~~~~m~~~R~~~-~~~~~-~g~-IYviGG~~~~~~~~sve~Ydp~~~~ 378 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKI-HVELPPMIKNRCRF-SLAVI-DDT-IYAIGGQNGTNVERTIECYTMGDDK 378 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCe-EeeCCCCcchhhce-eEEEE-CCE-EEEECCcCCCCCCceEEEEECCCCe
Confidence 56777788753 347788887432 22222221111111 22222 344 678888764 48889988754
Q ss_pred eee-eEeccCCCceEEEEEcCCCCcEEEEEeCCC-----------------------eEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 184 LKL-HSFESHKDEIFQVQWSPHNETILASSGTDR-----------------------RLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 184 ~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-----------------------~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
... ..+.........+++ +|. +.+.||.++ .+..||..+..-...
T Consensus 379 W~~~~~mp~~r~~~~~~~~--~g~-IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v-------- 447 (557)
T PHA02713 379 WKMLPDMPIALSSYGMCVL--DQY-IYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETL-------- 447 (557)
T ss_pred EEECCCCCcccccccEEEE--CCE-EEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeec--------
Confidence 321 111111111112222 344 778887653 366677666432111
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeCC------CeEEEEeCCC-CCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSED------NIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
..+.........+. -++. +.+.||.+ ..+..||.++ .+-........ ......+..-+|++.+
T Consensus 448 ----~~m~~~r~~~~~~~--~~~~-IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~---~r~~~~~~~~~~~iyv 517 (557)
T PHA02713 448 ----PNFWTGTIRPGVVS--HKDD-IYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES---RLSALHTILHDNTIMM 517 (557)
T ss_pred ----CCCCcccccCcEEE--ECCE-EEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc---ccccceeEEECCEEEE
Confidence 10111111111112 2455 66677654 2467898887 43322111111 1111123344788888
Q ss_pred ccCCCCcccccccccccccccccchhhh
Q psy4571 313 SESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 313 s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
.|+.++.. .+..+|..+++
T Consensus 518 ~Gg~~~~~---------~~e~yd~~~~~ 536 (557)
T PHA02713 518 LHCYESYM---------LQDTFNVYTYE 536 (557)
T ss_pred Eeeeccee---------ehhhcCccccc
Confidence 88877731 15666666654
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.82 Score=45.88 Aligned_cols=122 Identities=17% Similarity=0.260 Sum_probs=69.6
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEc--CCCCcEEEEEeCCCeEEEEEcCCCCCC
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNETILASSGTDRRLHVWDLSKIGEE 229 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~--p~~~~~l~sg~~dg~i~vwd~~~~~~~ 229 (437)
+.-+.-+.-++ +.++-+....+.|||.+.+...........+.|.++.|. |+++. +.+-|....|.+|.-......
T Consensus 32 ~~li~gss~~k-~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qs-iLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 32 PSLISGSSIKK-IAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQS-ILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred cceEeecccCc-EEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCE-EEEEEcCcEEEEEEccchhhh
Confidence 34444444454 234444455799999998664333322457889999984 78886 455566888888865332211
Q ss_pred CCCCCCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 230 QSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...+ .-.+.+.+. ...|+ .+|.+..|.++|. ++ .|+ ++.+.|+|-.
T Consensus 110 ~~~p--~w~~i~~i~-i~~~T~h~Igds~Wl~~G~-Lv-V~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 110 NKGP--SWAPIRKID-ISSHTPHPIGDSIWLKDGT-LV-VGS-GNQLFVFDKW 156 (631)
T ss_pred cCCc--ccceeEEEE-eecCCCCCccceeEecCCe-EE-EEe-CCEEEEECCC
Confidence 1100 001112221 22333 5799999999997 44 333 3568888653
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.58 Score=47.19 Aligned_cols=153 Identities=10% Similarity=0.081 Sum_probs=78.0
Q ss_pred CCeEEEEEeCCCCcEEEEEe-----CCC--eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEE
Q psy4571 150 AEVNCLSFNPYSEYILATGS-----ADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVW 221 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs-----~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vw 221 (437)
..+...+.+|+|+.+.++.. .|+ .|.+.+.. ........+ ...+.-.|+|+|+. +++.+.. ..+++.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g--g~~~~lt~g--~~~t~PsWspDG~~-lw~v~dg~~~~~v~ 424 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG--GVAVQVLEG--HSLTRPSWSLDADA-VWVVVDGNTVVRVI 424 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC--CcceeeecC--CCCCCceECCCCCc-eEEEecCcceEEEe
Confidence 46788999999997555542 244 45555543 221222222 23788899999875 5554422 223332
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE---EeCCCCCCceee----eeeec
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE---YCDSTDSDTKTM----RLDSI 294 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i---wd~~~~~~~~~~----~~~~~ 294 (437)
+-........... .. .+. . . .....|..+.|+|||.++++.. ++.|++ -....|. ..+ .+...
T Consensus 425 ~~~~~gql~~~~v--d~-ge~-~-~-~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~--~~l~~~~~l~~~ 494 (591)
T PRK13616 425 RDPATGQLARTPV--DA-SAV-A-S-RVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQ--YALTNPREVGPG 494 (591)
T ss_pred ccCCCceEEEEec--cC-chh-h-h-ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCc--eeecccEEeecc
Confidence 2211111000000 00 000 0 0 2245699999999999666554 477777 4444443 122 11111
Q ss_pred ccCCceeeeecCCCCcccccCCCC
Q psy4571 295 RSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.......+.|.+++.++ .+..++
T Consensus 495 l~~~~~~l~W~~~~~L~-V~~~~~ 517 (591)
T PRK13616 495 LGDTAVSLDWRTGDSLV-VGRSDP 517 (591)
T ss_pred cCCccccceEecCCEEE-EEecCC
Confidence 11224667899999965 444333
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.31 E-value=2.3 Score=39.11 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=92.4
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee--eeccCCCCe-EEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAEV-NCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~h~~~v-~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
|....|.++.-|.+-+.||.+.-..+...+...... .+..-..++ ..-++...+.. ++--+.+|.|+--|+.....
T Consensus 139 C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~-~~F~Sy~G~v~~~dlsg~~~ 217 (342)
T PF06433_consen 139 CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGR-LYFVSYEGNVYSADLSGDSA 217 (342)
T ss_dssp EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTE-EEEEBTTSEEEEEEETTSSE
T ss_pred EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCe-EEEEecCCEEEEEeccCCcc
Confidence 555566666778899999999999988543222111 111112222 23334444443 55567889998888876432
Q ss_pred ee-eEecc----------CCCceEEEEEcCCCCcEEEEE--eC-----CC--eEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 185 KL-HSFES----------HKDEIFQVQWSPHNETILASS--GT-----DR--RLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 185 ~~-~~~~~----------h~~~v~~v~~~p~~~~~l~sg--~~-----dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
.. ..+.- -.+.-.-+++++..+.+++.- +. |+ .|.++|+.+.+.+ .
T Consensus 218 ~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv--------------~ 283 (342)
T PF06433_consen 218 KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRV--------------A 283 (342)
T ss_dssp EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEE--------------E
T ss_pred cccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEE--------------E
Confidence 11 11110 123345577776655433322 11 22 2777777776433 3
Q ss_pred EecCccccEEEEEEccCCCeEEEE-EeCCCeEEEEeCCCCCCceeee
Q psy4571 245 IHGGHTAKISDFSWNPNEPWVICS-VSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 245 ~~~~h~~~v~~l~~~p~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
++.- ..++.+|+.+.+.+-+|++ ...++.+.+||..+|+.+..+.
T Consensus 284 Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 284 RIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 3332 2357789999877645544 4568999999999998888776
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.68 Score=45.19 Aligned_cols=148 Identities=14% Similarity=0.213 Sum_probs=91.7
Q ss_pred cccccceeEEEEeeCCCcceEEEee--ccCceEeee----cCCCceeEEEecCC----C-CeEEEecCceEEEEEeeec-
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERV--INEEYKIWK----KNTPFLYDLVVNNY----V-ANISCILNISILFFEIIFT- 97 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs--~d~~v~iw~----~~~~~~~~~~~~~~----~-~~i~~~~~~~i~~~~~~~~- 97 (437)
+...++.+.-++|. --...++|.- .+|.++.=| .+-+.++++.|.+. . ..++......|.+|.+...
T Consensus 15 L~qAiHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~ 93 (671)
T PF15390_consen 15 LHQAIHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDSKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPST 93 (671)
T ss_pred HHhhhccccceEec-CCCEEEEEeeeeeCCccccCCccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCc
Confidence 34556666667777 3334444433 344444433 23366888888654 2 4556777788999986521
Q ss_pred ---------c--cc--ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 98 ---------Q--NF--PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 98 ---------~--~~--~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
+ ++ +++.-...+.|+| ...+|++-.....-.++++..+. .+....+ ...+.|.|.+|.+||+++
T Consensus 94 ~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~~dvSV~~sV~~d~-srVkaDi-~~~G~IhCACWT~DG~RL 170 (671)
T PF15390_consen 94 TERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTARDVSVLPSVHCDS-SRVKADI-KTSGLIHCACWTKDGQRL 170 (671)
T ss_pred cccccceeeeeeeccCCcccCCCcccccC-CCceEEEEecCceeEeeeeeeCC-ceEEEec-cCCceEEEEEecCcCCEE
Confidence 1 11 2344456899999 56777766665555567776432 2222233 456789999999999986
Q ss_pred EEEEeCCCeEEEEeCCC
Q psy4571 165 LATGSADKTVALWDLRN 181 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~ 181 (437)
+++.+..-.-.+||-..
T Consensus 171 VVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 171 VVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred EEEeCCeEEEEEecCch
Confidence 66666666677888653
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=95.19 E-value=2.1 Score=37.92 Aligned_cols=156 Identities=15% Similarity=0.224 Sum_probs=78.1
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee---ee-----ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH---TV-----DAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~-----~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
...|++-- ++.++++--.++.+.++++.......... .+ ..+...+-.++|+|.+.. |+.+-+..-..++
T Consensus 67 ~EgI~y~g-~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~-L~v~kE~~P~~l~ 144 (248)
T PF06977_consen 67 YEGITYLG-NGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNR-LFVAKERKPKRLY 144 (248)
T ss_dssp EEEEEE-S-TTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTE-EEEEEESSSEEEE
T ss_pred ceeEEEEC-CCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCE-EEEEeCCCChhhE
Confidence 34566653 34444433348889888885332111111 11 124456899999998886 6666676666677
Q ss_pred eCCC--Cceeee--Ee------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 178 DLRN--LKLKLH--SF------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 178 d~~~--~~~~~~--~~------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
.++. ....+. .. ......+.+++++|...++++....+..|..+|... +.... ..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G-~~~~~------------~~L~ 211 (248)
T PF06977_consen 145 EVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQG-RVVSS------------LSLD 211 (248)
T ss_dssp EEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT---EEEE------------EE-S
T ss_pred EEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCC-CEEEE------------EEeC
Confidence 6653 111111 11 123345789999998877888888888999999443 32211 1121
Q ss_pred C-c------cccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 248 G-H------TAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 248 ~-h------~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
. . -...-.|+|.++|. +. ..+.-+..+++
T Consensus 212 ~g~~gl~~~~~QpEGIa~d~~G~-LY-IvsEpNlfy~f 247 (248)
T PF06977_consen 212 RGFHGLSKDIPQPEGIAFDPDGN-LY-IVSEPNLFYRF 247 (248)
T ss_dssp TTGGG-SS---SEEEEEE-TT---EE-EEETTTEEEEE
T ss_pred CcccCcccccCCccEEEECCCCC-EE-EEcCCceEEEe
Confidence 1 1 12467899999997 44 34455565554
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.43 Score=49.95 Aligned_cols=152 Identities=12% Similarity=0.107 Sum_probs=91.4
Q ss_pred CCcceEEeeCCCCCEEE--EEECCCcEEEEEcCCCCC-----CCCee---eeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 104 LSRQDVAWHLLHESLFG--SVADDQKLMIWDTRSHNV-----SKPSH---TVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~--~~~~dg~v~vwd~~~~~~-----~~~~~---~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
..+..+..++ +....+ ..+++-.|..||++.-.. ..++. .......-..++.|+|.=....+....|+.
T Consensus 101 ~pi~~~v~~~-D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls 179 (1405)
T KOG3630|consen 101 IPIVIFVCFH-DATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS 179 (1405)
T ss_pred ccceEEEecc-CCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence 3555666666 333333 233344788899874321 11111 112223456788899876555788888999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
|++..+.........+ .....+++++|+|.|.. ++.|...|++.-|...-.. ..... ..+ . .....|
T Consensus 180 l~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQ-l~iG~nnGt~vQy~P~lei-k~~ip------~Pp---~-~e~yrv 246 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQ-LFIGRNNGTEVQYEPSLEI-KSEIP------EPP---V-EENYRV 246 (1405)
T ss_pred hhhhhhhhhhhhhccc-CcccceeeEEeccccce-eeEecCCCeEEEeecccce-eeccc------CCC---c-CCCcce
Confidence 9998876533323332 34567899999999996 8899999999888765431 11100 000 0 114678
Q ss_pred EEEEEccCCCeEEEEE
Q psy4571 254 SDFSWNPNEPWVICSV 269 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~ 269 (437)
.+|.|-....++++-+
T Consensus 247 l~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 247 LSVTWLSTQEFLVVYG 262 (1405)
T ss_pred eEEEEecceeEEEEec
Confidence 9999977766444433
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.87 E-value=1 Score=42.49 Aligned_cols=157 Identities=13% Similarity=0.185 Sum_probs=96.5
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL- 186 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~- 186 (437)
.+-|.. .++.+++ ...|.+.=|-....+..-++..-....++|.++.|++|.+ +||+--.|.+|.+++....+...
T Consensus 27 gvFfDD-aNkqlfa-vrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnk-ilAVQR~~~~v~f~nf~~d~~~l~ 103 (657)
T KOG2377|consen 27 GVFFDD-ANKQLFA-VRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNK-ILAVQRTSKTVDFCNFIPDNSQLE 103 (657)
T ss_pred ceeecc-CcceEEE-EecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcc-eEEEEecCceEEEEecCCCchhhH
Confidence 444443 2333333 3344455666654444455554445677999999999999 69999999999999985422211
Q ss_pred --eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 --HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 --~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
.+.+..+..|....|+.... +|.-.. .-+-+|.+.... +.++..+.|+..|.-..|+|+-+-
T Consensus 104 ~~~~ck~k~~~IlGF~W~~s~e--~A~i~~-~G~e~y~v~pek-------------rslRlVks~~~nvnWy~yc~et~v 167 (657)
T KOG2377|consen 104 YTQECKTKNANILGFCWTSSTE--IAFITD-QGIEFYQVLPEK-------------RSLRLVKSHNLNVNWYMYCPETAV 167 (657)
T ss_pred HHHHhccCcceeEEEEEecCee--EEEEec-CCeEEEEEchhh-------------hhhhhhhhcccCccEEEEccccce
Confidence 12223345588899987644 444443 346677665432 223446677888888899998874
Q ss_pred EEEEEe-CCCeEEEEeCCCC
Q psy4571 265 VICSVS-EDNIMQEYCDSTD 283 (437)
Q Consensus 265 ~l~s~~-~dg~i~iwd~~~~ 283 (437)
.+.+.+ ..+++.-+.++++
T Consensus 168 ~LL~t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 168 ILLSTTVLENVLNPFHFRAG 187 (657)
T ss_pred EeeeccccccccccEEEeec
Confidence 444444 4555555555554
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.63 E-value=2.6 Score=36.30 Aligned_cols=139 Identities=9% Similarity=0.097 Sum_probs=84.7
Q ss_pred CCCeEEEEEeCCCCcEEEEEeC-C---------CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 149 TAEVNCLSFNPYSEYILATGSA-D---------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~-d---------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
..+.+.-..+|+|++ ..|.. | |.++.|-... . +..+...-+--+.++|+.+.+.+..+-+.+-.|
T Consensus 108 knR~NDgkvdP~Gry--y~GtMad~~~~le~~~g~Ly~~~~~h--~-v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V 182 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRY--YGGTMADFGDDLEPIGGELYSWLAGH--Q-VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEV 182 (310)
T ss_pred hcccccCccCCCCce--eeeeeccccccccccccEEEEeccCC--C-ceeeehhccCCccccccccCcEEEEEccCceEE
Confidence 456677788999996 33332 1 3344443332 1 112222223346789998887777788888889
Q ss_pred EEEE--cCCCCCCCCCCCCCCCCCceEEEecCc----cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee
Q psy4571 219 HVWD--LSKIGEEQSTEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 219 ~vwd--~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 292 (437)
.-|| ..++..... +.++.++.. .-..-.++...+|. +.+++-..++|...|..+|+.+.++.+.
T Consensus 183 ~a~dyd~~tG~~snr---------~~i~dlrk~~~~e~~~PDGm~ID~eG~-L~Va~~ng~~V~~~dp~tGK~L~eiklP 252 (310)
T KOG4499|consen 183 DAYDYDCPTGDLSNR---------KVIFDLRKSQPFESLEPDGMTIDTEGN-LYVATFNGGTVQKVDPTTGKILLEIKLP 252 (310)
T ss_pred eeeecCCCcccccCc---------ceeEEeccCCCcCCCCCCcceEccCCc-EEEEEecCcEEEEECCCCCcEEEEEEcC
Confidence 8888 555543322 222222221 11123344556777 7878888899999999999999998874
Q ss_pred ecccCCceeeeec
Q psy4571 293 SIRSNGGISSTAS 305 (437)
Q Consensus 293 ~~~~~~~~~~~~s 305 (437)
.....+++|-
T Consensus 253 ---t~qitsccFg 262 (310)
T KOG4499|consen 253 ---TPQITSCCFG 262 (310)
T ss_pred ---CCceEEEEec
Confidence 4556666763
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.44 Score=47.97 Aligned_cols=148 Identities=9% Similarity=0.076 Sum_probs=74.5
Q ss_pred CCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-----------------
Q psy4571 115 HESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK----------------- 172 (437)
Q Consensus 115 ~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg----------------- 172 (437)
++.+++.|+.++ .+..||+.+.. ...+..+.........+.. +|. +.+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~-W~~~~~mp~~r~~~~~~~~--~g~-IYviGG~~~~~~~~~~~~~~~~~~~~ 426 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDK-WKMLPDMPIALSSYGMCVL--DQY-IYIIGGRTEHIDYTSVHHMNSIDMEE 426 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCe-EEECCCCCcccccccEEEE--CCE-EEEEeCCCcccccccccccccccccc
Confidence 577888888764 47889987542 2222222111111112222 344 677787653
Q ss_pred ------eEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEeCCC------eEEEEEcCC-CCCCCCCCCCCCC
Q psy4571 173 ------TVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDR------RLHVWDLSK-IGEEQSTEDAEDG 238 (437)
Q Consensus 173 ------~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg------~i~vwd~~~-~~~~~~~~~~~~~ 238 (437)
.+..||.++.+... ..+...... .+++. -+++ +.+.|+.++ .+..||..+ .+-
T Consensus 427 ~~~~~~~ve~YDP~td~W~~v~~m~~~r~~-~~~~~-~~~~-IYv~GG~~~~~~~~~~ve~Ydp~~~~~W---------- 493 (557)
T PHA02713 427 DTHSSNKVIRYDTVNNIWETLPNFWTGTIR-PGVVS-HKDD-IYVVCDIKDEKNVKTCIFRYNTNTYNGW---------- 493 (557)
T ss_pred cccccceEEEECCCCCeEeecCCCCccccc-CcEEE-ECCE-EEEEeCCCCCCccceeEEEecCCCCCCe----------
Confidence 47778888754311 111111111 11222 2344 677777542 356788776 332
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDS 284 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~ 284 (437)
..+..+.........+.+ +|. +.+.||.|+ .+..||..+.+
T Consensus 494 --~~~~~m~~~r~~~~~~~~--~~~-iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 494 --ELITTTESRLSALHTILH--DNT-IMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred --eEccccCcccccceeEEE--CCE-EEEEeeecceeehhhcCccccc
Confidence 111122222222233333 455 888999888 67777777654
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.16 Score=30.87 Aligned_cols=31 Identities=19% Similarity=0.176 Sum_probs=26.8
Q ss_pred CcceEEeeCCCC--CEEEEEECCCcEEEEEcCC
Q psy4571 105 SRQDVAWHLLHE--SLFGSVADDQKLMIWDTRS 135 (437)
Q Consensus 105 ~v~~~~~sp~~~--~~l~~~~~dg~v~vwd~~~ 135 (437)
++.++.|+|.++ .+|+.+-..|.|.|+|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 578999998655 7999998899999999984
|
It contains a characteristic DLL sequence motif. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=94.18 E-value=4.4 Score=37.05 Aligned_cols=185 Identities=9% Similarity=0.027 Sum_probs=81.9
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
..++.|.. ...+++|. .| +.+...+.+.....+..-..-.+....+....++. ...++..|.|. -...+...
T Consensus 64 l~~I~f~~--~~g~ivG~-~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~--~~l~~~~G~iy--~T~DgG~t 135 (302)
T PF14870_consen 64 LNSISFDG--NEGWIVGE-PG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDGS--AELAGDRGAIY--RTTDGGKT 135 (302)
T ss_dssp EEEEEEET--TEEEEEEE-TT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETTE--EEEEETT--EE--EESSTTSS
T ss_pred EEEEEecC--CceEEEcC-Cc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCc--EEEEcCCCcEE--EeCCCCCC
Confidence 45677764 34455554 44 33334443333222221112233344454444443 33344555543 23322221
Q ss_pred e-eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 186 L-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 186 ~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
- .....-.+.+..+.-+++|++ ++.+.......-||-....- .+. ...-...|..|.|.|++.
T Consensus 136 W~~~~~~~~gs~~~~~r~~dG~~-vavs~~G~~~~s~~~G~~~w------------~~~--~r~~~~riq~~gf~~~~~- 199 (302)
T PF14870_consen 136 WQAVVSETSGSINDITRSSDGRY-VAVSSRGNFYSSWDPGQTTW------------QPH--NRNSSRRIQSMGFSPDGN- 199 (302)
T ss_dssp EEEEE-S----EEEEEE-TTS-E-EEEETTSSEEEEE-TT-SS-------------EEE--E--SSS-EEEEEE-TTS--
T ss_pred eeEcccCCcceeEeEEECCCCcE-EEEECcccEEEEecCCCccc------------eEE--ccCccceehhceecCCCC-
Confidence 1 123344577888889999984 66665555556776543211 111 122346899999999988
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeee----eecccCCceeeeecCCCCcccccCCC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRL----DSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+.+. ...|.|+.=+... ....+.. ......+...+++.+++...++|+..
T Consensus 200 lw~~-~~Gg~~~~s~~~~--~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 200 LWML-ARGGQIQFSDDPD--DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp EEEE-ETTTEEEEEE-TT--EEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred EEEE-eCCcEEEEccCCC--CccccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 5443 4888888776211 1111111 11123445777999998888877755
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.095 Score=53.14 Aligned_cols=170 Identities=12% Similarity=0.132 Sum_probs=97.2
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC-----CeeeeccCCCCeEEEEEeC---CCCcEEEEEeCCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK-----PSHTVDAHTAEVNCLSFNP---YSEYILATGSADK 172 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~-----~~~~~~~h~~~v~~l~~~~---~~~~~l~sgs~dg 172 (437)
.++..|-+++|-..+...++ -.-|.+.|||+..- .++ .+.........+.-+.|+| +..+ +..+-.++
T Consensus 130 gf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l-~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~-ic~~~~~~ 205 (1283)
T KOG1916|consen 130 GFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVL-QGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVY-ICYGLKGG 205 (1283)
T ss_pred cCCCCcccccccccCChHHH--HHhhhhheeehHhh-ccccccceEEeecCcCCCCcceeeecccccccce-eeeccCCC
Confidence 46778888888654433333 33467889988631 111 1122222334455566654 4554 77888899
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEE-----------EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQ-----------WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~-----------~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
+|++....+... ..+.+|...+..++ .+|||. +++.++.||.++.|.+.-...... +
T Consensus 206 ~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt-v~a~a~~dG~v~f~Qiyi~g~~~~---------r 273 (1283)
T KOG1916|consen 206 EIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGT-VFAWAISDGSVGFYQIYITGKIVH---------R 273 (1283)
T ss_pred ceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCc-EEEEeecCCccceeeeeeeccccH---------h
Confidence 999888776332 34455765554433 688997 689999999988887754332211 3
Q ss_pred eEEEecCcc-ccEEEEEEccC-------C--CeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 242 LLFIHGGHT-AKISDFSWNPN-------E--PWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 242 ~~~~~~~h~-~~v~~l~~~p~-------~--~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
++...+.|+ .+-.|..|+.+ + ..++-+...+..+++|.....+|.
T Consensus 274 clhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 274 CLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred hhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 334444454 22222222211 1 223333345677999988777666
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.39 Score=29.18 Aligned_cols=33 Identities=3% Similarity=0.058 Sum_probs=27.3
Q ss_pred ccEEEEEEccCCC--eEEEEEeCCCeEEEEeCCCC
Q psy4571 251 AKISDFSWNPNEP--WVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 251 ~~v~~l~~~p~~~--~~l~s~~~dg~i~iwd~~~~ 283 (437)
+.|+++.|+|... .+|+.+-.-|.|.++|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 3689999997544 58888888999999999953
|
It contains a characteristic DLL sequence motif. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=93.52 E-value=2 Score=43.36 Aligned_cols=179 Identities=11% Similarity=0.022 Sum_probs=94.2
Q ss_pred CCCEEEEEECCC------cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC------CeEEEEeCCCC
Q psy4571 115 HESLFGSVADDQ------KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD------KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d------g~i~lwd~~~~ 182 (437)
.+.+++.|+.++ .+..||..+.. ......+. ....-.+++... + .+.++|+.| .++..||.+++
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~-w~~~a~m~-~~r~~~~~~~~~-~-~lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNE-WSSLAPMP-SPRCRVGVAVLN-G-KLYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCc-EeecCCCC-cccccccEEEEC-C-EEEEEccccCCCcccceEEEecCCCC
Confidence 466777787773 57788887541 22222222 222344555554 3 478999999 35778888876
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-----EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-----LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
+.. ....-..+-.......-+..+.|.||.||. +-.||..+.+-... ..... ...+..
T Consensus 360 ~W~--~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v------------a~m~~---~r~~~g 422 (571)
T KOG4441|consen 360 QWT--PVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV------------APMLT---RRSGHG 422 (571)
T ss_pred cee--ccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccccc------------CCCCc---ceeeeE
Confidence 541 121111111222222223348899999875 66777766532211 11111 122222
Q ss_pred Ecc-CCCeEEEEEeCC------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 258 WNP-NEPWVICSVSED------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 258 ~~p-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
... +|. +.+.||.| .++..||..+.+............ ......-++.+.+.|+.++
T Consensus 423 v~~~~g~-iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~---~~g~a~~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 423 VAVLGGK-LYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRS---GFGVAVLNGKIYVVGGFDG 486 (571)
T ss_pred EEEECCE-EEEEcCcCCCccccceEEEEcCCCCceeecCCcccccc---cceEEEECCEEEEECCccC
Confidence 222 455 77788754 346788887765433322211111 1114455788888888777
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=93.20 E-value=5.8 Score=37.65 Aligned_cols=150 Identities=9% Similarity=0.134 Sum_probs=76.4
Q ss_pred CeEEEEEeCCCCcEEEEEe-----------CCC-eEEEEeCCCCcee---eeEeccCCCceEEEEEcCCCCcEEEEEeCC
Q psy4571 151 EVNCLSFNPYSEYILATGS-----------ADK-TVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTD 215 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs-----------~dg-~i~lwd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d 215 (437)
....++|.++|. ++++-. ..+ .|.+++-.++... ...+.........+++.+++ ++++ +..
T Consensus 15 ~P~~ia~d~~G~-l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~-~~~ 90 (367)
T TIGR02604 15 NPIAVCFDERGR-LWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVA-TPP 90 (367)
T ss_pred CCceeeECCCCC-EEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEe-CCC
Confidence 456788999888 454432 223 6777765432211 22333233456889998887 4554 333
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCCCceEEE-ecC----ccccEEEEEEccCCCeEEEEEeCC------------------
Q psy4571 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFI-HGG----HTAKISDFSWNPNEPWVICSVSED------------------ 272 (437)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~----h~~~v~~l~~~p~~~~~l~s~~~d------------------ 272 (437)
...++.|........ ...+.+.. +.. +......++|.|||. +.++-+..
T Consensus 91 ~i~~~~d~~gdg~ad-------~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~~~~~~~~~~~~~~~~~ 162 (367)
T TIGR02604 91 DILFLRDKDGDDKAD-------GEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLASKVTRPGTSDESRQGL 162 (367)
T ss_pred eEEEEeCCCCCCCCC-------CccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCCceeccCCCccCccccc
Confidence 333333443321111 01122221 222 234578899999998 54444421
Q ss_pred -CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 273 -NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 273 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
|.|.-++..+++. ..+ .........++|+|+|.++++-..
T Consensus 163 ~g~i~r~~pdg~~~-e~~---a~G~rnp~Gl~~d~~G~l~~tdn~ 203 (367)
T TIGR02604 163 GGGLFRYNPDGGKL-RVV---AHGFQNPYGHSVDSWGDVFFCDND 203 (367)
T ss_pred CceEEEEecCCCeE-EEE---ecCcCCCccceECCCCCEEEEccC
Confidence 3455555554331 111 112233456789999998776543
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.16 E-value=2.5 Score=42.51 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCCEEEEEECCC------cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCc
Q psy4571 115 HESLFGSVADDQ------KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLK 183 (437)
Q Consensus 115 ~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~ 183 (437)
++.+++.|+.++ .+..||+.+.. ...+..+.........+.. ++. +++.|+.+ ..+..||..+.+
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~R~~~~~~~~--~~~-lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKS-WNKVPELIYPRKNPGVTVF--NNR-IYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCe-eeECCCCCcccccceEEEE--CCE-EEEEeCCCCCEecceEEEEcCCCCc
Confidence 456777776543 46778876432 1111111111111222222 344 67888765 347778887654
Q ss_pred eeee-EeccCCCceEEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 184 LKLH-SFESHKDEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 184 ~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
.... .+. +...-.+++. -++ .+++.||.+ ..+..||+.+..
T Consensus 370 W~~~~~lp-~~r~~~~~~~-~~~-~iYv~GG~~~~~~~~~~v~~yd~~t~~ 417 (534)
T PHA03098 370 WREEPPLI-FPRYNPCVVN-VNN-LIYVIGGISKNDELLKTVECFSLNTNK 417 (534)
T ss_pred eeeCCCcC-cCCccceEEE-ECC-EEEEECCcCCCCcccceEEEEeCCCCe
Confidence 3111 111 1111112222 234 367777732 357888887653
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=92.90 E-value=6.1 Score=34.69 Aligned_cols=99 Identities=9% Similarity=-0.012 Sum_probs=61.2
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEE-EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC-LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
++.++.|...|.+++.+.+++ .....+..-. .|.+ ....+++. ++..|+.|++....|.++... +...+.-.+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tG---s~~w~f~~~~-~vk~~a~~d~~~g-lIycgshd~~~yalD~~~~~c-VykskcgG~ 136 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTG---SQIWNFVILE-TVKVRAQCDFDGG-LIYCGSHDGNFYALDPKTYGC-VYKSKCGGG 136 (354)
T ss_pred CCEEEEEEccCcEEEEEecch---hheeeeeehh-hhccceEEcCCCc-eEEEecCCCcEEEecccccce-EEecccCCc
Confidence 456889999999999999954 3333333221 2222 23456777 699999999999999998444 666554333
Q ss_pred ceEEEEEcC-CCCcEEEEEeCCCeEEEEE
Q psy4571 195 EIFQVQWSP-HNETILASSGTDRRLHVWD 222 (437)
Q Consensus 195 ~v~~v~~~p-~~~~~l~sg~~dg~i~vwd 222 (437)
...+-+..| ++. |..+...|.+.--.
T Consensus 137 ~f~sP~i~~g~~s--ly~a~t~G~vlavt 163 (354)
T KOG4649|consen 137 TFVSPVIAPGDGS--LYAAITAGAVLAVT 163 (354)
T ss_pred eeccceecCCCce--EEEEeccceEEEEc
Confidence 333344555 333 44445555554333
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=92.79 E-value=3.2 Score=39.48 Aligned_cols=228 Identities=12% Similarity=0.085 Sum_probs=94.9
Q ss_pred EEecCceEEEEEeeeccccc------------cC---CCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCC
Q psy4571 82 SCILNISILFFEIIFTQNFP------------FP---LSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSK 140 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~~~------------~~---~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~ 140 (437)
-+..++.|.++|.......+ .+ .....+..-| ++.+++++-.| |-+.++|-+ ...
T Consensus 93 PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp-~G~imIS~lGd~~G~g~Ggf~llD~~---tf~ 168 (461)
T PF05694_consen 93 PGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLP-DGRIMISALGDADGNGPGGFVLLDGE---TFE 168 (461)
T ss_dssp EBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-S-S--EEEEEEEETTS-S--EEEEE-TT---T--
T ss_pred eeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecC-CccEEEEeccCCCCCCCCcEEEEcCc---ccc
Confidence 34467788888865322211 00 0112222335 46677665322 446667766 233
Q ss_pred Ceeeecc---CCCCeEEEEEeCCCCcEEEEEeC--------------------CCeEEEEeCCCCceeeeEeccCC--Cc
Q psy4571 141 PSHTVDA---HTAEVNCLSFNPYSEYILATGSA--------------------DKTVALWDLRNLKLKLHSFESHK--DE 195 (437)
Q Consensus 141 ~~~~~~~---h~~~v~~l~~~~~~~~~l~sgs~--------------------dg~i~lwd~~~~~~~~~~~~~h~--~~ 195 (437)
....... ...--..+.|.|... +++|... -.++.+||+.+.+. ++++.--. ..
T Consensus 169 v~g~We~~~~~~~~gYDfw~qpr~n-vMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~-~Q~idLg~~g~~ 246 (461)
T PF05694_consen 169 VKGRWEKDRGPQPFGYDFWYQPRHN-VMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKL-LQTIDLGEEGQM 246 (461)
T ss_dssp EEEE--SB-TT------EEEETTTT-EEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEE-EEEEES-TTEEE
T ss_pred ccceeccCCCCCCCCCCeEEcCCCC-EEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcE-eeEEecCCCCCc
Confidence 3333222 122345677788665 5666642 46799999999554 66654222 23
Q ss_pred eEEEEEc--CCCCcEEEEEeCCCeEEEEEc-CCCCCCCC----CCCCC---CCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 196 IFQVQWS--PHNETILASSGTDRRLHVWDL-SKIGEEQS----TEDAE---DGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 196 v~~v~~~--p~~~~~l~sg~~dg~i~vwd~-~~~~~~~~----~~~~~---~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
...+.|. |+..+=++.+....+|..|-- ..+.-..+ ..... ..-++++..+..-..-|+.|..|.|.+++
T Consensus 247 pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfL 326 (461)
T PF05694_consen 247 PLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFL 326 (461)
T ss_dssp EEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EE
T ss_pred eEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEE
Confidence 5677775 445544555555566665544 32221110 00000 00001111112223468999999999988
Q ss_pred EEEEeCCCeEEEEeCCCCCCceeee---eee-------------cccCCceeeeecCCCCcccccC
Q psy4571 266 ICSVSEDNIMQEYCDSTDSDTKTMR---LDS-------------IRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~~~~~~~~---~~~-------------~~~~~~~~~~~s~~g~~l~s~s 315 (437)
.+++=.+|.++.||+..-...+..- +.. .-..++..+..|.||+.|...+
T Consensus 327 Yvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 327 YVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp EEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred EEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 8888899999999998754332221 110 1122345567888888776654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=92.72 E-value=2.5 Score=42.59 Aligned_cols=107 Identities=14% Similarity=0.125 Sum_probs=68.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc--cCCCeEEEEEeCC
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN--PNEPWVICSVSED 272 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--p~~~~~l~s~~~d 272 (437)
...-+.-+..++ +.+.-+....+.|||.+.+....+ ..+ ...+.|.++.|. |+++ .+.+.|..
T Consensus 31 ~~~li~gss~~k-~a~V~~~~~~LtIWD~~~~~lE~~------------~~f-~~~~~I~dLDWtst~d~q-siLaVGf~ 95 (631)
T PF12234_consen 31 NPSLISGSSIKK-IAVVDSSRSELTIWDTRSGVLEYE------------ESF-SEDDPIRDLDWTSTPDGQ-SILAVGFP 95 (631)
T ss_pred CcceEeecccCc-EEEEECCCCEEEEEEcCCcEEEEe------------eee-cCCCceeeceeeecCCCC-EEEEEEcC
Confidence 445555555555 233334445699999988753332 122 346789999995 7888 55577788
Q ss_pred CeEEEEeCC---------CCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 273 NIMQEYCDS---------TDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 273 g~i~iwd~~---------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+.|.++.-. +..+++.+.......+.+....|.++|.+++..+.
T Consensus 96 ~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGN 148 (631)
T PF12234_consen 96 HHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSGN 148 (631)
T ss_pred cEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeCC
Confidence 888888532 22345555554444455667799999998876654
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=92.56 E-value=12 Score=37.37 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=35.7
Q ss_pred eEEEEeCCCCceeeeEeccCCC---------ceEEEEEcCCCC--cEEEEEeCCCeEEEEEcCCCCCC
Q psy4571 173 TVALWDLRNLKLKLHSFESHKD---------EIFQVQWSPHNE--TILASSGTDRRLHVWDLSKIGEE 229 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~---------~v~~v~~~p~~~--~~l~sg~~dg~i~vwd~~~~~~~ 229 (437)
+|.-.|+++++. ...++.... +..-+.+..+|+ .+++.+..+|.+.+.|.++++.+
T Consensus 272 s~vAld~~TG~~-~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 272 SIVARDPDTGKI-KWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred eEEEEccccCCE-EEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 567778888775 333332111 122233334554 47889999999999999998764
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=92.53 E-value=1.5 Score=46.23 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=85.0
Q ss_pred CeEEEEEeCCCCcEEEE-EeCCCeEEEEeCCCCceee----eEec------cCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 151 EVNCLSFNPYSEYILAT-GSADKTVALWDLRNLKLKL----HSFE------SHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~s-gs~dg~i~lwd~~~~~~~~----~~~~------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
++..+...+|+....+. .+.+-.|..+|+++..... ..+. ....-..++.|+|.-.-..+.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 55566666776642222 2334478899998643211 1111 12234567888887554456777899999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec-ccCC
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI-RSNG 298 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~ 298 (437)
|..+........ --.-...+++++|+|.|. .++.|-.+|++.-|...-. ....+..... ....
T Consensus 182 V~~~~~~~~~v~--------------s~p~t~~~Tav~WSprGK-Ql~iG~nnGt~vQy~P~le-ik~~ip~Pp~~e~yr 245 (1405)
T KOG3630|consen 182 VKSTKQLAQNVT--------------SFPVTNSQTAVLWSPRGK-QLFIGRNNGTEVQYEPSLE-IKSEIPEPPVEENYR 245 (1405)
T ss_pred hhhhhhhhhhhc--------------ccCcccceeeEEeccccc-eeeEecCCCeEEEeecccc-eeecccCCCcCCCcc
Confidence 887765322111 112345789999999999 7889999999998876532 2222221111 1244
Q ss_pred ceeeeecCCCCccc
Q psy4571 299 GISSTASPTASSTA 312 (437)
Q Consensus 299 ~~~~~~s~~g~~l~ 312 (437)
+..++|-....+++
T Consensus 246 vl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 246 VLSVTWLSTQEFLV 259 (1405)
T ss_pred eeEEEEecceeEEE
Confidence 55566655544444
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=92.33 E-value=1.6 Score=41.46 Aligned_cols=161 Identities=11% Similarity=0.040 Sum_probs=75.0
Q ss_pred CcceEEeeCCCCCEEEEEE--------------------CCCcEEEEEcCCCCCCCCeeeeccCC--CCeEEEEEe--CC
Q psy4571 105 SRQDVAWHLLHESLFGSVA--------------------DDQKLMIWDTRSHNVSKPSHTVDAHT--AEVNCLSFN--PY 160 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~--------------------~dg~v~vwd~~~~~~~~~~~~~~~h~--~~v~~l~~~--~~ 160 (437)
--.++-|.| ..+.+++.. ...++.+||+. ..+.++++.--. ..+..+.|. |+
T Consensus 182 ~gYDfw~qp-r~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~---~r~~~Q~idLg~~g~~pLEvRflH~P~ 257 (461)
T PF05694_consen 182 FGYDFWYQP-RHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWS---TRKLLQTIDLGEEGQMPLEVRFLHDPD 257 (461)
T ss_dssp ----EEEET-TTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETT---TTEEEEEEES-TTEEEEEEEEE-SSTT
T ss_pred CCCCeEEcC-CCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECC---CCcEeeEEecCCCCCceEEEEecCCCC
Confidence 346788888 566776653 24679999999 455666654322 235667775 55
Q ss_pred CCcEEEEEeCCCeEEEEeC-CCCcee---eeEecc-----------------CCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 161 SEYILATGSADKTVALWDL-RNLKLK---LHSFES-----------------HKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~-~~~~~~---~~~~~~-----------------h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
..+=++.+.-..+|..|-- +.++.. +..+.. -..-|+.|..|.|++++.+++=.+|.|+
T Consensus 258 ~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~Gdvr 337 (461)
T PF05694_consen 258 ANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVR 337 (461)
T ss_dssp --EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEE
T ss_pred ccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEE
Confidence 5554555556666666644 332211 111111 1345799999999998888888899999
Q ss_pred EEEcCCCCCCCCCCCCCCCC------CceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 220 VWDLSKIGEEQSTEDAEDGP------PELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~------~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
.||+.....++.......+. ...+. -+.-.+...-|..|-||+++.+|.|
T Consensus 338 qYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~-g~~l~GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 338 QYDISDPFNPKLVGQVFLGGSIRKGDHPVVK-GKRLRGGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp EEE-SSTTS-EEEEEEE-BTTTT-B--TTS-------S----EEE-TTSSEEEEE--
T ss_pred EEecCCCCCCcEEeEEEECcEeccCCCcccc-ccccCCCCCeEEEccCCeEEEEEee
Confidence 99998865433211000000 00000 0001223466788889997777775
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=92.29 E-value=16 Score=37.97 Aligned_cols=127 Identities=14% Similarity=0.227 Sum_probs=72.1
Q ss_pred ccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 55 INEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 55 ~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
.|+.+-+|+.....++.+.+......- ..+..+....+.... +....|..+..|| .+.++|..+..|...+.=.+
T Consensus 40 ~d~~L~vWd~~e~~l~~~nlr~~~~~~--~~~~~~~~q~L~~~~--~~~f~v~~i~~n~-~g~~lal~G~~~v~V~~LP~ 114 (717)
T PF10168_consen 40 RDGDLFVWDSSECCLLTVNLRSLESDA--EGPAKSSYQKLLPSN--PPLFEVHQISLNP-TGSLLALVGPRGVVVLELPR 114 (717)
T ss_pred eCCEEEEEECCCCEEEEEeeccccccc--cCccccCcceeecCC--CCceeEEEEEECC-CCCEEEEEcCCcEEEEEecc
Confidence 368899999877666555432211100 001111111111111 1224788999999 67888888877654443332
Q ss_pred CCC------CCC---Ceeee--------ccCCCCeEEEEEeCCC---CcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 135 SHN------VSK---PSHTV--------DAHTAEVNCLSFNPYS---EYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 135 ~~~------~~~---~~~~~--------~~h~~~v~~l~~~~~~---~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
... .++ ..++. ..+...|..+.|+|.+ .+ |+.-..|+++|+||+.....+..
T Consensus 115 r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~-l~vLtsdn~lR~y~~~~~~~p~~ 186 (717)
T PF10168_consen 115 RWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH-LVVLTSDNTLRLYDISDPQHPWQ 186 (717)
T ss_pred ccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe-EEEEecCCEEEEEecCCCCCCeE
Confidence 100 011 11111 1344579999999974 64 88889999999999986555443
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.022 Score=53.68 Aligned_cols=147 Identities=9% Similarity=0.142 Sum_probs=100.1
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
-...|-|.+.+ ++.++.+-.+..||-.. +..... ..++....++|..++..+++.+-..+.+.+||+.+.....
T Consensus 38 i~~~w~~e~~n-lavaca~tiv~~YD~ag----q~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 38 IIHRWRPEGHN-LAVACANTIVIYYDKAG----QVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred ceeeEecCCCc-eehhhhhhHHHhhhhhc----ceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 45678885555 77777788888898752 222222 3356677899999988767777889999999998733211
Q ss_pred eEecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 187 HSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 187 ~~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
..+.+ |.. .-+.|++-++. ++.|-..|.+.|++..+...... ...|...++++++.+.+.
T Consensus 112 LE~gg~~s~--sll~wsKg~~e-l~ig~~~gn~viynhgtsR~iiv--------------~Gkh~RRgtq~av~lEd~-- 172 (615)
T KOG2247|consen 112 LESGGTSSK--SLLAWSKGTPE-LVIGNNAGNIVIYNHGTSRRIIV--------------MGKHQRRGTQIAVTLEDY-- 172 (615)
T ss_pred HhccCcchH--HHHhhccCCcc-ccccccccceEEEeccchhhhhh--------------hcccccceeEEEecccce--
Confidence 11211 222 22788888874 78888899999999887644332 334888999999999885
Q ss_pred EEEEeCCCeEEEE
Q psy4571 266 ICSVSEDNIMQEY 278 (437)
Q Consensus 266 l~s~~~dg~i~iw 278 (437)
.+.++.|..+.+-
T Consensus 173 vil~dcd~~L~v~ 185 (615)
T KOG2247|consen 173 VILCDCDNTLSVT 185 (615)
T ss_pred eeecCcHHHHHHh
Confidence 5566666555443
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.14 Score=52.02 Aligned_cols=135 Identities=11% Similarity=0.192 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC-CCcEEEEEeCCCeEEEEeCCCC--c----eeeeEeccCCCceE
Q psy4571 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILATGSADKTVALWDLRNL--K----LKLHSFESHKDEIF 197 (437)
Q Consensus 125 dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~sgs~dg~i~lwd~~~~--~----~~~~~~~~h~~~v~ 197 (437)
.+.+++-+....- ......++..+.|..+.|... ... +. -.-|.+.+||++-- + ..+.........+.
T Consensus 110 ~~~vrvaN~~~sm--~~~~l~kgf~G~v~dl~fah~~~pk-~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~ 184 (1283)
T KOG1916|consen 110 ENGVRVANQEPSM--RHNELAKGFPGGVGDLQFAHTKCPK-GR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQ 184 (1283)
T ss_pred hhhhhhccCcchh--HHHHHHhcCCCCcccccccccCChH-HH--HHhhhhheeehHhhccccccceEEeecCcCCCCcc
Confidence 4557777765321 111345677888888888532 222 22 33467889988741 1 11222233344556
Q ss_pred EEEEcC---CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE-----------EccCCC
Q psy4571 198 QVQWSP---HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS-----------WNPNEP 263 (437)
Q Consensus 198 ~v~~~p---~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~-----------~~p~~~ 263 (437)
-+.|.| +.- .+..+-.++.|++....+... ..+.+|...+..++ .+|||.
T Consensus 185 ~V~wcp~~~~~~-~ic~~~~~~~i~lL~~~ra~~---------------~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt 248 (1283)
T KOG1916|consen 185 LVSWCPIAVNKV-YICYGLKGGEIRLLNINRALR---------------SLFRSHSQRVTDMAFFAEGVLKLASLSPDGT 248 (1283)
T ss_pred eeeecccccccc-eeeeccCCCceeEeeechHHH---------------HHHHhcCCCcccHHHHhhchhhheeeCCCCc
Confidence 677765 333 355666778888877665322 11334555444433 589999
Q ss_pred eEEEEEeCCCeEEEEeCC
Q psy4571 264 WVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~ 281 (437)
.+++.+.||.++.|.+.
T Consensus 249 -v~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 249 -VFAWAISDGSVGFYQIY 265 (1283)
T ss_pred -EEEEeecCCccceeeee
Confidence 88899999999988764
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.046 Score=51.57 Aligned_cols=107 Identities=12% Similarity=0.199 Sum_probs=73.4
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
...-+++|...++..++.+-..+.+.+||+.+....+ +..-..|.... +.|++.+.. ++.|...|.+.+++..+.+
T Consensus 75 g~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-LE~gg~~s~sl--l~wsKg~~e-l~ig~~~gn~viynhgtsR 150 (615)
T KOG2247|consen 75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-LESGGTSSKSL--LAWSKGTPE-LVIGNNAGNIVIYNHGTSR 150 (615)
T ss_pred hhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-HhccCcchHHH--HhhccCCcc-ccccccccceEEEeccchh
Confidence 3445677777556666777888999999998543221 11111222222 789998885 8889999999999999866
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
. ......|...++++++.+.+. .+.++.|..
T Consensus 151 ~-iiv~Gkh~RRgtq~av~lEd~--vil~dcd~~ 181 (615)
T KOG2247|consen 151 R-IIVMGKHQRRGTQIAVTLEDY--VILCDCDNT 181 (615)
T ss_pred h-hhhhcccccceeEEEecccce--eeecCcHHH
Confidence 5 434444899999999999875 455554543
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=91.76 E-value=13 Score=35.79 Aligned_cols=112 Identities=9% Similarity=0.111 Sum_probs=65.1
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeC---C-CCcEEEEEeCCCeEEEEeCCCCc-----
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNP---Y-SEYILATGSADKTVALWDLRNLK----- 183 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~---~-~~~~l~sgs~dg~i~lwd~~~~~----- 183 (437)
++...+++|+.+|.++||++...+.. ..+..-..-..+|..++.-+ . ....||. =.-..+.+|.+....
T Consensus 35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEH 113 (418)
T ss_pred CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCccc
Confidence 35678999999999999999654311 11212223456888887643 1 2222333 556678888773211
Q ss_pred ---eeeeEeccCCC--ceEEEEEcC----CCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 184 ---LKLHSFESHKD--EIFQVQWSP----HNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 184 ---~~~~~~~~h~~--~v~~v~~~p----~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
..+.....|.- ....++.-| .++.+++.=+.||.+.+|+-+..
T Consensus 114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~ 165 (418)
T PF14727_consen 114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESF 165 (418)
T ss_pred CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcE
Confidence 11223333432 233333333 23456788899999999997764
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=91.72 E-value=12 Score=35.46 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=55.4
Q ss_pred CCcceEEeeCCCCCEEEEEE-----------CCC-cEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 104 LSRQDVAWHLLHESLFGSVA-----------DDQ-KLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~-----------~dg-~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
.....|+|.+ +++++++-. ..+ .|.+++-.++ ........+.........+++.+++ ++++ ..
T Consensus 14 ~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~-~~ 89 (367)
T TIGR02604 14 RNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVA-TP 89 (367)
T ss_pred CCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEe-CC
Confidence 4567889988 566665532 223 6766654322 1122233333334456889999887 3554 44
Q ss_pred CCeEEEEeCCCC-----c-eee-eEecc----CCCceEEEEEcCCCCcEEEEEe
Q psy4571 171 DKTVALWDLRNL-----K-LKL-HSFES----HKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 171 dg~i~lwd~~~~-----~-~~~-~~~~~----h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
+...++.|.... + ..+ ..+.. +......++|.|+|. +.++-+
T Consensus 90 ~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G 142 (367)
T TIGR02604 90 PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHG 142 (367)
T ss_pred CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecc
Confidence 443344455321 1 111 11222 134477899999997 455444
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=91.64 E-value=3 Score=42.49 Aligned_cols=120 Identities=15% Similarity=0.215 Sum_probs=79.0
Q ss_pred cCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCC-------C----C------CCCCeeeeccCCCCeEEEEEe--CCC
Q psy4571 102 FPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRS-------H----N------VSKPSHTVDAHTAEVNCLSFN--PYS 161 (437)
Q Consensus 102 ~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~-------~----~------~~~~~~~~~~h~~~v~~l~~~--~~~ 161 (437)
.+..|+-|...-. +...|+++..||.|.+|..+. . + ..++...+. -...++.++++ ...
T Consensus 99 ~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~ 177 (717)
T PF08728_consen 99 FPHTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKS 177 (717)
T ss_pred CCceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcc
Confidence 5556666655433 456889999999999997631 0 0 011222222 24478999998 666
Q ss_pred CcEEEEEeCCCeEEEEeCCCC--ceeeeEeccCCCceEEEEEcCCC--C---cEEEEEeCCCeEEEEEc
Q psy4571 162 EYILATGSADKTVALWDLRNL--KLKLHSFESHKDEIFQVQWSPHN--E---TILASSGTDRRLHVWDL 223 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~--~~~~~~~~~h~~~v~~v~~~p~~--~---~~l~sg~~dg~i~vwd~ 223 (437)
+ +||+++....|.||-.... +.....-..|...|.+|+|.++. . ..+++++-.|.+.+|++
T Consensus 178 r-lIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 178 R-LIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred e-EEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 6 6999999999998866542 21111122366789999998754 1 15778889999998888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=91.29 E-value=8.2 Score=40.05 Aligned_cols=115 Identities=6% Similarity=0.078 Sum_probs=66.4
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCe----EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEE
Q psy4571 151 EVNCLSFNPYSEYILATGSADKT----VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVW 221 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~----i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vw 221 (437)
.+..+.++|+|+++.++.+.+|. |++-|+.++......+.. .-..++|.++++.++++...+ ..|+.+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN---VEPSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC---cceEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 46778899999975555444443 888899876532222221 125699999998766665432 357777
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEE-EEEEccCCCeEEEEEe--CCCeEEEEeC
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS-DFSWNPNEPWVICSVS--EDNIMQEYCD 280 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~p~~~~~l~s~~--~dg~i~iwd~ 280 (437)
++.+..... .+++. ....... .+..+.+++++++... .++.+.+++.
T Consensus 205 ~lgt~~~~d----------~lv~~--e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 205 TIGTPASQD----------ELVYE--EKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred ECCCChhHC----------eEEEe--eCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 777653221 22322 2122222 3333447776554443 3467888885
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=91.08 E-value=2.9 Score=34.83 Aligned_cols=32 Identities=9% Similarity=0.401 Sum_probs=26.7
Q ss_pred cEEEEEEccCC-----CeEEEEEeCCCeEEEEeCCCC
Q psy4571 252 KISDFSWNPNE-----PWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 252 ~v~~l~~~p~~-----~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.+.+++|||.| +.+|+....++.|.+|.....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~ 123 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGN 123 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCC
Confidence 78999999954 468889999999999987643
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=90.86 E-value=10 Score=32.90 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=62.7
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEc--CCCCCC--CCeeeecc----CCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDT--RSHNVS--KPSHTVDA----HTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~--~~~~~~--~~~~~~~~----h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
-+.++|+.+...+..+-+.+-+|.-||. .++... +.+..++. ..-..-.++...+|. +.++.-..++|...
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~-L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGN-LYVATFNGGTVQKV 238 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCc-EEEEEecCcEEEEE
Confidence 3678998766666677777788877874 333211 12222211 011122344455666 68888889999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCC
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPH 204 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~ 204 (437)
|..+++. +.+++--...|++++|-..
T Consensus 239 dp~tGK~-L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 239 DPTTGKI-LLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred CCCCCcE-EEEEEcCCCceEEEEecCC
Confidence 9999887 6666666888999999643
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=90.14 E-value=9.2 Score=37.13 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=50.0
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC-------CCCCCceEEEecCccccEEEEEEccCC--CeE
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-------EDGPPELLFIHGGHTAKISDFSWNPNE--PWV 265 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~l~~~p~~--~~~ 265 (437)
.|..+..++.|.. ++-.|.+|.+..+=.+.-......++. ..+-...+++.. ..-.+..++|+|+. ..-
T Consensus 105 eV~~vl~s~~GS~-VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss-~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 105 EVYQVLLSPTGSH-VALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS-TSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEEecCCCce-EEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC-CceeeeeccccCCccCCce
Confidence 5778889999985 556666775543322211111111100 000011122222 22357788999987 334
Q ss_pred EEEEeCCCeEEEEeCCCCCCc
Q psy4571 266 ICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~~~~ 286 (437)
+..-+.|+.||+||+.....+
T Consensus 183 L~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEEEecCcEEEEEecCCcchh
Confidence 557788999999999865544
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=89.73 E-value=9.7 Score=39.49 Aligned_cols=87 Identities=22% Similarity=0.362 Sum_probs=50.6
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCC-CCCCCceE-----EEecCccccEEEEEEccCC---C
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDA-EDGPPELL-----FIHGGHTAKISDFSWNPNE---P 263 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~-~~~~~~~~-----~~~~~h~~~v~~l~~~p~~---~ 263 (437)
..|..|.++|+|.. ++..|.. .|.|-.+... ......+.. ....++.+ +....+...|..+.|+|.+ .
T Consensus 85 f~v~~i~~n~~g~~-lal~G~~-~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 85 FEVHQISLNPTGSL-LALVGPR-GVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred eeEEEEEECCCCCE-EEEEcCC-cEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 46889999999985 5555544 4555555431 110000000 00001111 0112345689999999975 5
Q ss_pred eEEEEEeCCCeEEEEeCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~ 283 (437)
.|+.-..|+++|+||+...
T Consensus 163 -~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 163 -HLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred -eEEEEecCCEEEEEecCCC
Confidence 5667788999999999754
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=89.60 E-value=11 Score=37.35 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=50.6
Q ss_pred CCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC--CeEEEEeCCCCceeee
Q psy4571 115 HESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD--KTVALWDLRNLKLKLH 187 (437)
Q Consensus 115 ~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d--g~i~lwd~~~~~~~~~ 187 (437)
++.++++|+.++ .+..||+.+.. ...+..+.........+. -++. +.+.|+.+ .++..||..+++. .
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~-W~~~~~m~~~r~~~~~v~--~~~~-iYviGG~~~~~sve~ydp~~n~W--~ 344 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNN-WIPIPPMNSPRLYASGVP--ANNK-LYVVGGLPNPTSVERWFHGDAAW--V 344 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCE-EEECCCCCchhhcceEEE--ECCE-EEEECCcCCCCceEEEECCCCeE--E
Confidence 456777777543 46678877431 111112211111111222 2344 67888764 3577888776443 1
Q ss_pred EeccCCCceE--EEEEcCCCCcEEEEEeCCC---eEEEEEcCCC
Q psy4571 188 SFESHKDEIF--QVQWSPHNETILASSGTDR---RLHVWDLSKI 226 (437)
Q Consensus 188 ~~~~h~~~v~--~v~~~p~~~~~l~sg~~dg---~i~vwd~~~~ 226 (437)
....-..+.. +++ .-+|. +.+.||.++ .+..||.++.
T Consensus 345 ~~~~l~~~r~~~~~~-~~~g~-IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 345 NMPSLLKPRCNPAVA-SINNV-IYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred ECCCCCCCCcccEEE-EECCE-EEEecCcCCCCccEEEEeCCCC
Confidence 1111111111 122 12344 778887654 3667887664
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.55 E-value=15 Score=32.99 Aligned_cols=153 Identities=14% Similarity=0.121 Sum_probs=89.2
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe---cCCCCeEEEecCc----------eEEEEEe
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV---NNYVANISCILNI----------SILFFEI 94 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~---~~~~~~i~~~~~~----------~i~~~~~ 94 (437)
+|+.--.-.+.++.|+ |+.+.|++-......-+|=...|.+...+- -.+.+.+...+++ .+.++.+
T Consensus 79 kpi~g~~~nvS~LTyn-p~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~v 157 (316)
T COG3204 79 KPILGETANVSSLTYN-PDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTV 157 (316)
T ss_pred cccccccccccceeeC-CCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEE
Confidence 3344334458899999 888877777666665565544455444332 1222333333333 3333321
Q ss_pred eec--------cccc-----c-CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-------CCeE
Q psy4571 95 IFT--------QNFP-----F-PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-------AEVN 153 (437)
Q Consensus 95 ~~~--------~~~~-----~-~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-------~~v~ 153 (437)
... .+++ . +..-..++|.|. +..|..+-.-.-+.||........-.......++ ..|.
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~-~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvS 236 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPV-DHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVS 236 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCC-CceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccc
Confidence 110 0111 1 456778999995 5555567777778888776332111222222222 3578
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
++.|++....+|+-+.+++.+...|....
T Consensus 237 gl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 237 GLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred cceecCCCCcEEEEecCCceEEEEecCCC
Confidence 88999877778889999999998888753
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=89.34 E-value=2 Score=25.31 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=23.2
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCC--CeEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTD--RRLHVW 221 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~d--g~i~vw 221 (437)
......-....|+|||++++.++..+ |.-.||
T Consensus 5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34456678899999999888888777 766666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=88.93 E-value=12 Score=38.08 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=37.7
Q ss_pred CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
-.|+||+.. +..+..+....+++-.+.|+.+.. |++-..||++.++++-.
T Consensus 64 ~~I~If~~s----G~lL~~~~w~~~~lI~mgWs~~ee--LI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNIS----GQLLGRILWKHGELIGMGWSDDEE--LICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEecc----ccchHHHHhcCCCeeeecccCCce--EEEEeccceEEEeecch
Confidence 458888886 455544444444788999998776 77889999999999875
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=88.88 E-value=20 Score=33.86 Aligned_cols=229 Identities=15% Similarity=0.026 Sum_probs=95.2
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEE--EEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLM--IWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~--vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.-+.=+|.+++..+|..+..||.-. +.|+.+ ..+..+.... .......++|+++. ++-......|+-.|+++
T Consensus 37 YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t----~~i~QLTdg~g~~~~g~~~s~~~~~-~~Yv~~~~~l~~vdL~T 111 (386)
T PF14583_consen 37 YFYQNCFTDDGRKLLFASDFDGNRNLYLLDLAT----GEITQLTDGPGDNTFGGFLSPDDRA-LYYVKNGRSLRRVDLDT 111 (386)
T ss_dssp -TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-----EEEE---SS-B-TTT-EE-TTSSE-EEEEETTTEEEEEETTT
T ss_pred eecCCCcCCCCCEEEEEeccCCCcceEEEEccc----CEEEECccCCCCCccceEEecCCCe-EEEEECCCeEEEEECCc
Confidence 3344567886556677666677544 456652 2233333322 11224566788876 54444556889999998
Q ss_pred CceeeeEeccCCCceEEEEEc--CCCCcEEEEEe---C-------------------CCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWS--PHNETILASSG---T-------------------DRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~--p~~~~~l~sg~---~-------------------dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.+. ...+.....-+-...|. .++. .++-.- . ...|.--|+.+++
T Consensus 112 ~e~-~~vy~~p~~~~g~gt~v~n~d~t-~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~---------- 179 (386)
T PF14583_consen 112 LEE-RVVYEVPDDWKGYGTWVANSDCT-KLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE---------- 179 (386)
T ss_dssp --E-EEEEE--TTEEEEEEEEE-TTSS-EEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT------------
T ss_pred CcE-EEEEECCcccccccceeeCCCcc-EEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc----------
Confidence 664 33344344444444553 3444 232211 0 0112222333221
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEe---CCCe-EEEEeCCCC-CCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVS---EDNI-MQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~---~dg~-i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
.+. ...-+..+..+.|+|..+.+++-|- .|.. -|||-+++. ...+.+.... ....+..--|+|||..+.
T Consensus 180 --~~~---v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~-~~e~~gHEfw~~DG~~i~ 253 (386)
T PF14583_consen 180 --RKV---VFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM-EGESVGHEFWVPDGSTIW 253 (386)
T ss_dssp --EEE---EEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS-EE
T ss_pred --eeE---EEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCC-CCcccccccccCCCCEEE
Confidence 111 1123456788999999887777653 3432 467766543 2333332211 112222237899998665
Q ss_pred ccCC-CCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 313 SESP-TPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 313 s~s~-d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
--+. .+. ....|.-.|..+++... +. .....+-...+++|+.++
T Consensus 254 y~~~~~~~-------~~~~i~~~d~~t~~~~~-~~-~~p~~~H~~ss~Dg~L~v 298 (386)
T PF14583_consen 254 YDSYTPGG-------QDFWIAGYDPDTGERRR-LM-EMPWCSHFMSSPDGKLFV 298 (386)
T ss_dssp EEEEETTT---------EEEEEE-TTT--EEE-EE-EE-SEEEEEE-TTSSEEE
T ss_pred EEeecCCC-------CceEEEeeCCCCCCceE-EE-eCCceeeeEEcCCCCEEE
Confidence 4221 000 00115566677765432 21 112334444566666443
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=88.79 E-value=10 Score=29.82 Aligned_cols=111 Identities=11% Similarity=0.096 Sum_probs=69.3
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCce-------eeeEeccCCCceEEEEEcC----CCCcEEEEEeCCCeEEEEE
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKL-------KLHSFESHKDEIFQVQWSP----HNETILASSGTDRRLHVWD 222 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~-------~~~~~~~h~~~v~~v~~~p----~~~~~l~sg~~dg~i~vwd 222 (437)
.-.|....+. |++++.-|.|.|.+...... .+..+ .-...|++++-.| +++-+|+.|+ ...+..||
T Consensus 3 iGkfDG~~pc-L~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYD 79 (136)
T PF14781_consen 3 IGKFDGVHPC-LACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYD 79 (136)
T ss_pred EEEeCCCcee-EEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEE
Confidence 4456666774 89999999999998764321 12233 3566788886544 2334677776 56788999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc----CCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP----NEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p----~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+........ +.-.+.|+++.+-. ..+ ++..+.+..|.=||.+..+
T Consensus 80 V~~N~d~Fy---------------ke~~DGvn~i~~g~~~~~~~~--l~ivGGncsi~Gfd~~G~e 128 (136)
T PF14781_consen 80 VENNSDLFY---------------KEVPDGVNAIVIGKLGDIPSP--LVIVGGNCSIQGFDYEGNE 128 (136)
T ss_pred cccCchhhh---------------hhCccceeEEEEEecCCCCCc--EEEECceEEEEEeCCCCcE
Confidence 988755432 22345677777632 233 4455566777777766543
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=88.77 E-value=7.2 Score=39.87 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=64.0
Q ss_pred EEecCceEEEEEeee-------c----------------cccccCCCcceEEee--CCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 82 SCILNISILFFEIIF-------T----------------QNFPFPLSRQDVAWH--LLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~-------~----------------~~~~~~~~v~~~~~s--p~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
.|..||.|.+|.... . -.+..+.++..++++ . ..+++|++++...|.||-....
T Consensus 119 ~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~-~~rlIAVSsNs~~VTVFaf~l~ 197 (717)
T PF08728_consen 119 LCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYK-KSRLIAVSSNSQEVTVFAFALV 197 (717)
T ss_pred EEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecC-cceEEEEecCCceEEEEEEecc
Confidence 777889999995310 0 011134577788887 5 5788999998888888866532
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCC--C---cEEEEEeCCCeEEEEeC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYS--E---YILATGSADKTVALWDL 179 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~--~---~~l~sgs~dg~i~lwd~ 179 (437)
+.......-..|...|.+|+|-++. . -.+++++-.|.+.+|++
T Consensus 198 ~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 198 DERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 1111111122356679999998754 1 14788899999999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=88.71 E-value=8.4 Score=37.25 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=83.7
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc------EEEEEeCCCeEEEEeCCCCceeee--Eec
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY------ILATGSADKTVALWDLRNLKLKLH--SFE 190 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~------~l~sgs~dg~i~lwd~~~~~~~~~--~~~ 190 (437)
+..|..-..++--|++ .++.+....-|..- -+.|.|+..+ .-+.|-.+..|.-.|.+-....+. ..+
T Consensus 483 ~~dg~~~~kLykmDIE---rGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esK 557 (776)
T COG5167 483 YLDGGERDKLYKMDIE---RGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESK 557 (776)
T ss_pred EecCCCcccceeeecc---cceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeeh
Confidence 3445555566666776 56677776666543 4667774321 124555666777777775432222 222
Q ss_pred c--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 191 S--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
. ......+..-...| .+|.||..|.|++||.-...... .+.+-...|..|..+.+|.++|+|
T Consensus 558 dY~tKn~Fss~~tTesG--yIa~as~kGDirLyDRig~rAKt--------------alP~lG~aIk~idvta~Gk~ilaT 621 (776)
T COG5167 558 DYKTKNKFSSGMTTESG--YIAAASRKGDIRLYDRIGKRAKT--------------ALPGLGDAIKHIDVTANGKHILAT 621 (776)
T ss_pred hccccccccccccccCc--eEEEecCCCceeeehhhcchhhh--------------cCcccccceeeeEeecCCcEEEEe
Confidence 1 12223333333344 48999999999999975432221 144566789999999999988877
Q ss_pred EeCCCeEEEEeCC
Q psy4571 269 VSEDNIMQEYCDS 281 (437)
Q Consensus 269 ~~~dg~i~iwd~~ 281 (437)
|- ..+.+-|++
T Consensus 622 Ck--~yllL~d~~ 632 (776)
T COG5167 622 CK--NYLLLTDVP 632 (776)
T ss_pred ec--ceEEEEecc
Confidence 63 456666654
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=88.70 E-value=3.7 Score=35.71 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=45.4
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE------ec-------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHS------FE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~------~~-------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
+...+.+ +++-+.+|.+++||+.+.+..+.. +. .....|..+.++.+|. .+++-+ +|..+.|+.
T Consensus 18 l~~~~~~-Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~-PiV~ls-ng~~y~y~~ 94 (219)
T PF07569_consen 18 LECNGSY-LLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGV-PIVTLS-NGDSYSYSP 94 (219)
T ss_pred EEeCCCE-EEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCC-EEEEEe-CCCEEEecc
Confidence 3445776 888999999999999986543222 11 2446678888887776 455544 577788877
Q ss_pred CC
Q psy4571 224 SK 225 (437)
Q Consensus 224 ~~ 225 (437)
.-
T Consensus 95 ~L 96 (219)
T PF07569_consen 95 DL 96 (219)
T ss_pred cc
Confidence 65
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=88.33 E-value=37 Score=35.86 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=80.0
Q ss_pred EEEecCceEEEEEee-eccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC
Q psy4571 81 ISCILNISILFFEII-FTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 81 i~~~~~~~i~~~~~~-~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~ 159 (437)
+.......|++++-. ......-+...+..+.+. +...++.++.++.+...++.... .+. ..-+.....|.|+.++|
T Consensus 464 lvQvTs~~iRl~ss~~~~~~W~~p~~~ti~~~~~-n~sqVvvA~~~~~l~y~~i~~~~-l~e-~~~~~~e~evaCLDisp 540 (1096)
T KOG1897|consen 464 LVQVTSNSIRLVSSAGLRSEWRPPGKITIGVVSA-NASQVVVAGGGLALFYLEIEDGG-LRE-VSHKEFEYEVACLDISP 540 (1096)
T ss_pred EEEEecccEEEEcchhhhhcccCCCceEEEEEee-cceEEEEecCccEEEEEEeeccc-eee-eeeheecceeEEEeccc
Confidence 344455567777755 333344455666666666 45566667767777666666332 111 11123356899999997
Q ss_pred C--CCc---EEEEEeCCCeEEEEeCCCCceeeeE--ec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 160 Y--SEY---ILATGSADKTVALWDLRNLKLKLHS--FE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 160 ~--~~~---~l~sgs~dg~i~lwd~~~~~~~~~~--~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
- +++ +++.|..+..+.+--.......+.. +. .-+..|.-..+-.+.. .|.++..||.+.-|-+...
T Consensus 541 ~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~-yLlvalgdG~l~~fv~d~~ 615 (1096)
T KOG1897|consen 541 LGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIH-YLLVALGDGALLYFVLDIN 615 (1096)
T ss_pred CCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccce-EEEEEcCCceEEEEEEEcc
Confidence 5 444 7999988877665543321211111 11 1123344455555555 4778888999876655443
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=87.85 E-value=12 Score=35.05 Aligned_cols=113 Identities=13% Similarity=0.195 Sum_probs=58.0
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce--eeeEe----ccCCCceEEEEEcCC---CCcEEEEEeCC------
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHSF----ESHKDEIFQVQWSPH---NETILASSGTD------ 215 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~--~~~~~----~~h~~~v~~v~~~p~---~~~~l~sg~~d------ 215 (437)
..+.++|.|+|+ ++++...|.|++++... .. .+... .........++++|+ +.++.++.+..
T Consensus 3 ~P~~~a~~pdG~--l~v~e~~G~i~~~~~~g-~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLPDGR--LLVAERSGRIWVVDKDG-SLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEETTSC--EEEEETTTEEEEEETTT-EECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeCCCc--EEEEeCCceEEEEeCCC-cCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 357899999987 45567799999999332 32 22222 223457899999995 33445444422
Q ss_pred --CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC---ccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 216 --RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 216 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..|.-|.......... ....++..... ....-..|.|.|||. +.++.+..+
T Consensus 80 ~~~~v~r~~~~~~~~~~~------~~~~l~~~~p~~~~~~H~g~~l~fgpDG~-LYvs~G~~~ 135 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLS------SEEVLVTGLPDTSSGNHNGGGLAFGPDGK-LYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEEETTSCEEE------EEEEEEEEEES-CSSSS-EEEEEE-TTSE-EEEEEB-TT
T ss_pred cceeeEEEeccCCccccc------cceEEEEEeCCCCCCCCCCccccCCCCCc-EEEEeCCCC
Confidence 2344444433300000 00011111121 223456799999997 666655443
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=87.53 E-value=16 Score=31.37 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=64.4
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC---C---eEEEE-eCCC---Cceee
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---K---TVALW-DLRN---LKLKL 186 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g---~i~lw-d~~~---~~~~~ 186 (437)
+.|+.+...+.|.+|++... ..+.+..+.. -+.|..+.++..|.+ |+|-=++ . .+|+| +.+. ...++
T Consensus 29 d~Lfva~~g~~Vev~~l~~~-~~~~~~~F~T-v~~V~~l~y~~~GDY-lvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v 105 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQE-ECPLLCTFST-VGRVLQLVYSEAGDY-LVTLEEKNKRSPVDFVRAYFNWRSQKEENSPV 105 (215)
T ss_pred ceEEEEcCCCEEEEEEcccC-CCceeEEEcc-hhheeEEEeccccce-EEEEEeecCCccceEEEEEEEhhhhcccCCcE
Confidence 44545577888999999833 3455566644 478999999999998 6665332 2 55665 2221 11111
Q ss_pred e-Eecc---------------------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 187 H-SFES---------------------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 187 ~-~~~~---------------------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
. .+-+ -..++.+++..|.... |+.|+ ++++.+|.+...
T Consensus 106 ~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~-LlVg~-~~~l~lf~l~~~ 165 (215)
T PF14761_consen 106 RVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGN-LLVGC-GNKLVLFTLKYQ 165 (215)
T ss_pred EEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCC-EEEEc-CCEEEEEEEEEE
Confidence 1 1111 1345678888886555 55555 568889988664
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=87.34 E-value=3.2 Score=24.42 Aligned_cols=29 Identities=10% Similarity=0.402 Sum_probs=21.4
Q ss_pred cccEEEEEEccCCCeEEEEEeCC--CeEEEE
Q psy4571 250 TAKISDFSWNPNEPWVICSVSED--NIMQEY 278 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~d--g~i~iw 278 (437)
...-....|+|||+.++.+...+ |...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 44567789999999888887777 766665
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=87.29 E-value=15 Score=39.70 Aligned_cols=30 Identities=13% Similarity=0.076 Sum_probs=25.8
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKN 65 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~ 65 (437)
.....++|+ |...+++.|..+|.++++...
T Consensus 36 ~~~~~~afD-~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 36 STPSALAFD-PTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred CCCcceeec-cccceEEEEEecccEEEeccc
Confidence 455678999 999999999999999998853
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=87.03 E-value=44 Score=35.31 Aligned_cols=118 Identities=15% Similarity=0.181 Sum_probs=74.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC--CCCeeeeccCCCC----------eEEEEEeCCCCcEEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV--SKPSHTVDAHTAE----------VNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~h~~~----------v~~l~~~~~~~~~l~sgs~dg 172 (437)
+..+++|+|.+...||.....|.-.||++..... .........+.+. -..+.|.++... |+.++. .
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~-lLv~~r-~ 224 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNR-LLVCNR-S 224 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCE-EEEEcC-C
Confidence 5678999999889999999999999999921111 1111111112222 237888887775 555544 4
Q ss_pred eEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCc-EEEEEeCCCeEEEEEcCCC
Q psy4571 173 TVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNET-ILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 173 ~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~-~l~sg~~dg~i~vwd~~~~ 226 (437)
.+.++|+++..... .........|..+.-+|.... +|+-. ...|.+.++...
T Consensus 225 ~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT--s~eiiw~~~~~~ 278 (765)
T PF10214_consen 225 KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT--SKEIIWLDVKSS 278 (765)
T ss_pred ceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEe--cCeEEEEEccCC
Confidence 68899999755411 122234467888888887322 33332 356888888774
|
These proteins are found in fungi. |
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=86.59 E-value=5.2 Score=43.17 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=31.3
Q ss_pred eccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 96 FTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 96 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
......++.....++|+| ...++|.|+..|.|.+|-..
T Consensus 28 ~~~~~G~~~~~~~~afD~-~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 28 KTNRHGFPSTPSALAFDP-TQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred cceecCCCCCCcceeecc-ccceEEEEEecccEEEeccc
Confidence 344556677888999999 68899999999999999765
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=86.54 E-value=30 Score=34.76 Aligned_cols=106 Identities=10% Similarity=0.072 Sum_probs=51.3
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC------CeEEEEeCCCCc
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD------KTVALWDLRNLK 183 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d------g~i~lwd~~~~~ 183 (437)
++.+++.|+.+ ..+..||+.+.. ......+...... .+++.. ++. +.+.|+.+ ..+..||..+.+
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~lp~~r~~-~~~~~~-~~~-iYv~GG~~~~~~~~~~v~~yd~~t~~ 417 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESK-WREEPPLIFPRYN-PCVVNV-NNL-IYVIGGISKNDELLKTVECFSLNTNK 417 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCc-eeeCCCcCcCCcc-ceEEEE-CCE-EEEECCcCCCCcccceEEEEeCCCCe
Confidence 56788888765 347778877432 2222111111111 122222 344 67777742 458889988754
Q ss_pred eeee-EeccCCCceEEEEEcCCCCcEEEEEeCCC--------eEEEEEcCCCC
Q psy4571 184 LKLH-SFESHKDEIFQVQWSPHNETILASSGTDR--------RLHVWDLSKIG 227 (437)
Q Consensus 184 ~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--------~i~vwd~~~~~ 227 (437)
.... .+...... .+++. .++ .+++.|+.++ .+.+||..+.+
T Consensus 418 W~~~~~~p~~r~~-~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 418 WSKGSPLPISHYG-GCAIY-HDG-KIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred eeecCCCCccccC-ceEEE-ECC-EEEEECCccCCCCCcccceEEEecCCCCc
Confidence 3211 11100111 12222 234 3677776432 37888887654
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=86.27 E-value=32 Score=32.97 Aligned_cols=111 Identities=8% Similarity=0.027 Sum_probs=61.9
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce----eeeEecc--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL----KLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~----~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
...+..+.|.+++. ++..+.+|.+.. ....+.. ....... -...+..+.|.+++. ++ .++.+|.+....
T Consensus 280 ~~~l~~v~~~~dg~--l~l~g~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~~-a~G~~G~v~~s~ 354 (398)
T PLN00033 280 ARRIQNMGWRADGG--LWLLTRGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKE-AW-AAGGSGILLRST 354 (398)
T ss_pred ccceeeeeEcCCCC--EEEEeCCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCc-EE-EEECCCcEEEeC
Confidence 45688999999888 444556777544 3333221 1122211 123588999998876 44 555678776553
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
..++.-.. ......-....+.+.|.++++ .+ ..+.+|.|.-|
T Consensus 355 -D~G~tW~~-----------~~~~~~~~~~ly~v~f~~~~~-g~-~~G~~G~il~~ 396 (398)
T PLN00033 355 -DGGKSWKR-----------DKGADNIAANLYSVKFFDDKK-GF-VLGNDGVLLRY 396 (398)
T ss_pred -CCCcceeE-----------ccccCCCCcceeEEEEcCCCc-eE-EEeCCcEEEEe
Confidence 33222111 010122234677899988776 44 45677777654
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=86.17 E-value=15 Score=35.70 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=70.2
Q ss_pred CCCcceEEeeCCC-------CCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 103 PLSRQDVAWHLLH-------ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 103 ~~~v~~~~~sp~~-------~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
...+ -+.|.|.. ...| +|-.+..|.-.|++..+..-.+...+. ......|..-.. +.+ +|.|+..|-
T Consensus 509 ~ddv-vVqy~p~~kf~qmt~eqtl-vGlS~~svFrIDPR~~gNKi~v~esKdY~tKn~Fss~~tTe-sGy-Ia~as~kGD 584 (776)
T COG5167 509 KDDV-VVQYNPYFKFQQMTDEQTL-VGLSDYSVFRIDPRARGNKIKVVESKDYKTKNKFSSGMTTE-SGY-IAAASRKGD 584 (776)
T ss_pred CCcc-eeecCCchhHHhcCccceE-EeecccceEEecccccCCceeeeeehhcccccccccccccc-Cce-EEEecCCCc
Confidence 3344 67777742 2334 455566666667764321111111111 122233333333 344 999999999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
|++||--. ......+.+....|..+....+|.++|+|| ...+.+-|++.
T Consensus 585 irLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTC--k~yllL~d~~i 633 (776)
T COG5167 585 IRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATC--KNYLLLTDVPI 633 (776)
T ss_pred eeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEee--cceEEEEeccc
Confidence 99999654 222445667778899999999999877776 45788888764
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=86.15 E-value=11 Score=36.15 Aligned_cols=88 Identities=10% Similarity=0.065 Sum_probs=56.4
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE----EEEEEc-----
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI----SDFSWN----- 259 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~l~~~----- 259 (437)
+......+.+++.+|+++ +.|+...=|+|.++|+.++....- ++|..+.= ....-.
T Consensus 303 l~D~~R~~~~i~~sP~~~-laA~tDslGRV~LiD~~~~~vvrm--------------WKGYRdAqc~wi~~~~~~~~~~~ 367 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGR-LAAVTDSLGRVLLIDVARGIVVRM--------------WKGYRDAQCGWIEVPEEGDRDRS 367 (415)
T ss_pred eccCCceEEEEEECCCCC-EEEEEcCCCcEEEEECCCChhhhh--------------hccCccceEEEEEeecccccccc
Confidence 334456689999999987 577777778999999998754433 33332210 000000
Q ss_pred --------c-CCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 260 --------P-NEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 260 --------p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
+ ....+++=...-|.|.||++++|..+..+..
T Consensus 368 ~~~~~~~~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 368 NSNSPKSSSRFALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred cccccCCCCcceEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 0 0123455567789999999999987776654
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=86.08 E-value=40 Score=33.83 Aligned_cols=204 Identities=11% Similarity=0.017 Sum_probs=102.0
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeE----------EEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVN----------CLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~----------~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
+..+..++.++.|.-.|..++ +.+-...... ..+. .+++. +. .++.++.|+.+.-.|.++++.
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TG---k~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~-~v~v~t~dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTG---KELWKYDPKLPDDVIPVMCCDVVNRGVALY--DG-KVFFGTLDARLVALDAKTGKV 142 (527)
T ss_pred CCEEEEECCCCcEEEEECCCC---ceeeEecCCCCcccccccccccccccceEE--CC-EEEEEcCCCEEEEEECCCCCE
Confidence 345556777788888888743 3333322110 0111 12222 23 377788899999999999876
Q ss_pred eeeEecc--CCC--ceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCCCCCC-----------c--
Q psy4571 185 KLHSFES--HKD--EIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAEDGPP-----------E-- 241 (437)
Q Consensus 185 ~~~~~~~--h~~--~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------~-- 241 (437)
+..... +.. .+++--..-++. ++.+. .+|.|..+|.++++..-........+. +
T Consensus 143 -~W~~~~~~~~~~~~~tssP~v~~g~--Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~ 219 (527)
T TIGR03075 143 -VWSKKNGDYKAGYTITAAPLVVKGK--VITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPG 219 (527)
T ss_pred -EeecccccccccccccCCcEEECCE--EEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccc
Confidence 333321 111 111110111342 34433 268899999998876544222111000 0
Q ss_pred ------eEEEecCccccEEEEEEccCCCeEEEEEeC-----CC-----------eEEEEeCCCCCCceeeeeeec-----
Q psy4571 242 ------LLFIHGGHTAKISDFSWNPNEPWVICSVSE-----DN-----------IMQEYCDSTDSDTKTMRLDSI----- 294 (437)
Q Consensus 242 ------~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-----dg-----------~i~iwd~~~~~~~~~~~~~~~----- 294 (437)
.... .+-...-..+++.|... ++..+.. ++ .|.--|+++|+..-.++....
T Consensus 220 ~~tw~~~~~~-~gg~~~W~~~s~D~~~~-lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~ 297 (527)
T TIGR03075 220 AKTWPGDAWK-TGGGATWGTGSYDPETN-LIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDY 297 (527)
T ss_pred cCCCCCCccc-cCCCCccCceeEcCCCC-eEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccc
Confidence 0000 01111123456666655 4444431 12 677788999987766653110
Q ss_pred -ccCCceeeeecCCCC---cccccCCCCcccccccccccc
Q psy4571 295 -RSNGGISSTASPTAS---STASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 295 -~~~~~~~~~~s~~g~---~l~s~s~d~~~~~~~~~~~~~ 330 (437)
.....+-+....+|+ .++.+..+|.+.+.++...+.
T Consensus 298 d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 298 DGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred cCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 001112223335776 788889999855555544433
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=86.03 E-value=2.9 Score=24.93 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.5
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|++++++++...++.|.++|..+++....+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 57777787787899999999988876666654
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=85.57 E-value=26 Score=31.28 Aligned_cols=189 Identities=9% Similarity=0.053 Sum_probs=111.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
...+++-.| ++..-.++...|.|--.|..+ ++....-.+....-..|..-|||.. -++-+.. -|.-.|-++.+.
T Consensus 63 ap~dvapap-dG~VWft~qg~gaiGhLdP~t---Gev~~ypLg~Ga~Phgiv~gpdg~~-Witd~~~-aI~R~dpkt~ev 136 (353)
T COG4257 63 APFDVAPAP-DGAVWFTAQGTGAIGHLDPAT---GEVETYPLGSGASPHGIVVGPDGSA-WITDTGL-AIGRLDPKTLEV 136 (353)
T ss_pred CccccccCC-CCceEEecCccccceecCCCC---CceEEEecCCCCCCceEEECCCCCe-eEecCcc-eeEEecCcccce
Confidence 445667777 566666777777777777773 4444343444555667777888874 4433222 455556655442
Q ss_pred eeeEec--cCCCceEEEEEcCCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 185 KLHSFE--SHKDEIFQVQWSPHNETILASSGT---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 185 ~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
....+. .-........|.+.|. +-+++.. -+.|++|+... ...-
T Consensus 137 t~f~lp~~~a~~nlet~vfD~~G~-lWFt~q~G~yGrLdPa~~~i~vfpaPq------------------------G~gp 191 (353)
T COG4257 137 TRFPLPLEHADANLETAVFDPWGN-LWFTGQIGAYGRLDPARNVISVFPAPQ------------------------GGGP 191 (353)
T ss_pred EEeecccccCCCcccceeeCCCcc-EEEeeccccceecCcccCceeeeccCC------------------------CCCC
Confidence 222221 2234577888999887 5666642 12344444432 2345
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
+.|+..|+|. +-++.-.++.|-.-|..++. ...+......+.+...+-.+|.|...++....+.+..++..
T Consensus 192 yGi~atpdGs-vwyaslagnaiaridp~~~~-aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs 262 (353)
T COG4257 192 YGICATPDGS-VWYASLAGNAIARIDPFAGH-AEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPS 262 (353)
T ss_pred cceEECCCCc-EEEEeccccceEEcccccCC-cceecCCCcccccccccccCccCcEEEeccCCceeeEeCcc
Confidence 7788999999 66666667777777887773 33333333223444455667888888886666665444433
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=85.55 E-value=4.8 Score=35.01 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=48.9
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-----cCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-----GGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+..++.+ +++-..+|.+++||+.+.+....... ..++... ......|..+..+.+|. -+++-+ +|..
T Consensus 18 l~~~~~~-Ll~iT~~G~l~vWnl~~~k~~~~~~S-----i~pll~~~~~~~~~~~~~i~~~~lt~~G~-PiV~ls-ng~~ 89 (219)
T PF07569_consen 18 LECNGSY-LLAITSSGLLYVWNLKKGKAVLPPVS-----IAPLLNSSPVSDKSSSPNITSCSLTSNGV-PIVTLS-NGDS 89 (219)
T ss_pred EEeCCCE-EEEEeCCCeEEEEECCCCeeccCCcc-----HHHHhcccccccCCCCCcEEEEEEcCCCC-EEEEEe-CCCE
Confidence 4445765 66777899999999999876544210 0001000 03456789999998887 555544 5788
Q ss_pred EEEeCCCCC
Q psy4571 276 QEYCDSTDS 284 (437)
Q Consensus 276 ~iwd~~~~~ 284 (437)
+.|+..-+.
T Consensus 90 y~y~~~L~~ 98 (219)
T PF07569_consen 90 YSYSPDLGC 98 (219)
T ss_pred EEeccccce
Confidence 999877543
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=85.51 E-value=16 Score=39.71 Aligned_cols=152 Identities=13% Similarity=0.214 Sum_probs=84.4
Q ss_pred EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE--------eCCCCcEEEEEeCCCeEEEEeCCCCcee--eeE---
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATGSADKTVALWDLRNLKLK--LHS--- 188 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~--------~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~--- 188 (437)
.+.|+.+.+|+.+++ .....+.+-...|..+.. -|.=+++|+.++. -.|.++-+.-.+.+ ...
T Consensus 95 iTiDn~L~lWny~~~---~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~-~ei~ilgV~~~~~~~~~~~f~~ 170 (1311)
T KOG1900|consen 95 ITIDNNLFLWNYESD---NELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATP-VEIVILGVSFDEFTGELSIFNT 170 (1311)
T ss_pred EEeCCeEEEEEcCCC---CccccccchhhhheeeeeecCCCCcchhhhheeEEeccc-ceEEEEEEEeccccCccccccc
Confidence 456889999999953 334444444555655554 2333444555443 34555533211110 111
Q ss_pred ---eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCC--C-----CCCCCCC----CCCCCceEEEecCccccEE
Q psy4571 189 ---FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG--E-----EQSTEDA----EDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 189 ---~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~--~-----~~~~~~~----~~~~~~~~~~~~~h~~~v~ 254 (437)
+......|.++....+|+ ++.+| .|| .+|.+.-.. . ....... ..--+..+.....+.++|.
T Consensus 171 ~~~i~~dg~~V~~I~~t~nGR-IF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~ 246 (1311)
T KOG1900|consen 171 SFKISVDGVSVNCITYTENGR-IFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIR 246 (1311)
T ss_pred ceeeecCCceEEEEEeccCCc-EEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcce
Confidence 222345688999888887 56554 566 555542111 0 0000000 0000111222236778999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.++.....+ ++.+-+..|+|.+||+..
T Consensus 247 qi~ID~SR~-IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 247 QITIDNSRN-ILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeEeccccc-eeeeeccCceEEEEEccC
Confidence 999987766 888999999999999986
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=84.67 E-value=23 Score=34.99 Aligned_cols=103 Identities=7% Similarity=-0.076 Sum_probs=49.4
Q ss_pred CCCEEEEEECC--CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEe
Q psy4571 115 HESLFGSVADD--QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK---TVALWDLRNLKLKLHSF 189 (437)
Q Consensus 115 ~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~ 189 (437)
++.+++.|+.+ ..+..||..++. ...+..+.........+.. +|. +.+.|+.++ .+..||.++........
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~-W~~~~~l~~~r~~~~~~~~--~g~-IYviGG~~~~~~~ve~ydp~~~~W~~~~~ 393 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAA-WVNMPSLLKPRCNPAVASI--NNV-IYVIGGHSETDTTTEYLLPNHDQWQFGPS 393 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCe-EEECCCCCCCCcccEEEEE--CCE-EEEecCcCCCCccEEEEeCCCCEEEeCCC
Confidence 57777888764 357788876331 2222222111111112222 344 678887654 47788887754321110
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
......-.+++ .-++. +.+.|+ .+.+||..+.
T Consensus 394 m~~~r~~~~~~-~~~~~-IYv~GG---~~e~ydp~~~ 425 (480)
T PHA02790 394 TYYPHYKSCAL-VFGRR-LFLVGR---NAEFYCESSN 425 (480)
T ss_pred CCCccccceEE-EECCE-EEEECC---ceEEecCCCC
Confidence 01111111222 22343 666664 4678888654
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=84.00 E-value=13 Score=30.95 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=25.6
Q ss_pred CeEEEEEeCCC-----CcEEEEEeCCCeEEEEeCCC
Q psy4571 151 EVNCLSFNPYS-----EYILATGSADKTVALWDLRN 181 (437)
Q Consensus 151 ~v~~l~~~~~~-----~~~l~sgs~dg~i~lwd~~~ 181 (437)
.|..++|||.| +.+|++-+.+|.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 78899999843 44789999999999998764
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=83.14 E-value=40 Score=31.48 Aligned_cols=150 Identities=5% Similarity=-0.019 Sum_probs=75.9
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE-eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~ 227 (437)
.+.+.++.+.|++.. + ..+..|.+..- .+.+...-.. ...-...++++.+.|+++ +++.| ..|.+++=....+.
T Consensus 172 ~g~~~~i~~~~~g~~-v-~~g~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~-~~~vg-~~G~~~~~s~d~G~ 246 (334)
T PRK13684 172 AGVVRNLRRSPDGKY-V-AVSSRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGN-LWMLA-RGGQIRFNDPDDLE 246 (334)
T ss_pred cceEEEEEECCCCeE-E-EEeCCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCC-EEEEe-cCCEEEEccCCCCC
Confidence 457889999998763 4 44455655432 1121111111 123346789999999987 45554 56766432222222
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCC
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPT 307 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 307 (437)
.-.... .........+.++.+.|++. ++ .++.+|.+. .....++.-+..............+.+..+
T Consensus 247 sW~~~~----------~~~~~~~~~l~~v~~~~~~~-~~-~~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~ 313 (334)
T PRK13684 247 SWSKPI----------IPEITNGYGYLDLAYRTPGE-IW-AGGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDP 313 (334)
T ss_pred cccccc----------CCccccccceeeEEEcCCCC-EE-EEcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCC
Confidence 111100 00001123578889999877 45 455677654 445555443333211111123444566666
Q ss_pred CCcccccCC
Q psy4571 308 ASSTASESP 316 (437)
Q Consensus 308 g~~l~s~s~ 316 (437)
++.+++|..
T Consensus 314 ~~~~~~G~~ 322 (334)
T PRK13684 314 EKGFVLGQR 322 (334)
T ss_pred CceEEECCC
Confidence 666666643
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=82.96 E-value=38 Score=31.07 Aligned_cols=154 Identities=12% Similarity=0.111 Sum_probs=72.6
Q ss_pred ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 146 DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 146 ~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
..-.+.+..+.-+++|.+ +++++.-....-||.-...... .-+.....|..+.|.|++. +.+ ....|.|+.=+...
T Consensus 141 ~~~~gs~~~~~r~~dG~~-vavs~~G~~~~s~~~G~~~w~~-~~r~~~~riq~~gf~~~~~-lw~-~~~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRY-VAVSSRGNFYSSWDPGQTTWQP-HNRNSSRRIQSMGFSPDGN-LWM-LARGGQIQFSDDPD 216 (302)
T ss_dssp -S----EEEEEE-TTS-E-EEEETTSSEEEEE-TT-SS-EE-EE--SSS-EEEEEE-TTS--EEE-EETTTEEEEEE-TT
T ss_pred cCCcceeEeEEECCCCcE-EEEECcccEEEEecCCCccceE-EccCccceehhceecCCCC-EEE-EeCCcEEEEccCCC
Confidence 344577899999999995 7777666666788865422212 2223467899999999986 344 44888998877222
Q ss_pred CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec
Q psy4571 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s 305 (437)
....-. +.+.......-.+..++|.+++. +.++|+ .|.+ +.....|+.-+..+...........+.|.
T Consensus 217 ~~~~w~---------~~~~~~~~~~~~~ld~a~~~~~~-~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~ 284 (302)
T PF14870_consen 217 DGETWS---------EPIIPIKTNGYGILDLAYRPPNE-IWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFV 284 (302)
T ss_dssp EEEEE------------B-TTSS--S-EEEEEESSSS--EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEE
T ss_pred Cccccc---------cccCCcccCceeeEEEEecCCCC-EEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEc
Confidence 111000 00000112223488999999887 665554 4444 34556665444333211122334455665
Q ss_pred CCCCcccccC
Q psy4571 306 PTASSTASES 315 (437)
Q Consensus 306 ~~g~~l~s~s 315 (437)
++.+-++.|.
T Consensus 285 ~~~~gf~lG~ 294 (302)
T PF14870_consen 285 NPDKGFVLGQ 294 (302)
T ss_dssp ETTEEEEE-S
T ss_pred CCCceEEECC
Confidence 5555555554
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=82.75 E-value=6.5 Score=23.34 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.3
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|++++++++...+++|.++|..+.+. +..+.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~-~~~i~ 31 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKV-IATIP 31 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeE-EEEEE
Confidence 56777666666789999999987554 44443
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=82.27 E-value=43 Score=31.17 Aligned_cols=159 Identities=13% Similarity=0.106 Sum_probs=82.2
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCe------EEEEeCCCCc---eee-----eEeccCCC--------ceEEEEEcCCCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKT------VALWDLRNLK---LKL-----HSFESHKD--------EIFQVQWSPHNE 206 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~------i~lwd~~~~~---~~~-----~~~~~h~~--------~v~~v~~~p~~~ 206 (437)
-+.+..|.+.|++.. +++-+.+|. +...++.... ..+ ..+..-.+ ...++++.++|.
T Consensus 19 ~GGlSgl~~~~~~~~-~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGR-FYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred cCcEeeEEEeCCCCE-EEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 356788888865553 666677777 5555544310 001 11111111 334788877776
Q ss_pred cEEEEEeCC------CeEEEEEcCCCCCCCCCCCCCCCCCceEE-----EecCccccEEEEEEccCCCeEEEEE-e---C
Q psy4571 207 TILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLF-----IHGGHTAKISDFSWNPNEPWVICSV-S---E 271 (437)
Q Consensus 207 ~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~~p~~~~~l~s~-~---~ 271 (437)
++++.-.+ ..|..++.. +........ |..... .....+...-+|+++|+|+.+++.. + .
T Consensus 98 -~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~v----P~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~ 171 (326)
T PF13449_consen 98 -FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPV----PAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQ 171 (326)
T ss_pred -EEEEeCCccCCCCCCEEEEECCC-CcccceEcc----ccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccC
Confidence 56666666 678888866 333222110 000000 1123456789999999999444332 1 1
Q ss_pred CCe---------EEE--EeCCC-CCCceeeeeeec------ccCCceeeeecCCCCccccc
Q psy4571 272 DNI---------MQE--YCDST-DSDTKTMRLDSI------RSNGGISSTASPTASSTASE 314 (437)
Q Consensus 272 dg~---------i~i--wd~~~-~~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~s~ 314 (437)
|+. +++ +|..+ +.....+..... ...++..+.+-+++++++.-
T Consensus 172 d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLE 232 (326)
T PF13449_consen 172 DGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLE 232 (326)
T ss_pred CCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEE
Confidence 321 444 44444 333444433221 23455556777888766644
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=82.24 E-value=47 Score=34.94 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=63.4
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEeccCCCc--------eEEEEEcC----------------CCCcEEEEEeCCCeEE
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDE--------IFQVQWSP----------------HNETILASSGTDRRLH 219 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~--------v~~v~~~p----------------~~~~~l~sg~~dg~i~ 219 (437)
.++.++.++.|.-.|.++++. +..+...... ...+++.. .+. .++.++.|+.+.
T Consensus 196 ~lYv~t~~~~V~ALDa~TGk~-lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~-rV~~~T~Dg~Li 273 (764)
T TIGR03074 196 TLYLCTPHNKVIALDAATGKE-KWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCAR-RIILPTSDARLI 273 (764)
T ss_pred EEEEECCCCeEEEEECCCCcE-EEEEcCCCCcccccccccccceEEecCCcccccccccccccccCC-EEEEecCCCeEE
Confidence 377778888888889888776 4444321110 11222211 223 366788899999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEE-ecCccccEEEEEEcc--CCCeEEEEEeC----------CCeEEEEeCCCCCCc
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFI-HGGHTAKISDFSWNP--NEPWVICSVSE----------DNIMQEYCDSTDSDT 286 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~p--~~~~~l~s~~~----------dg~i~iwd~~~~~~~ 286 (437)
-.|.++++.......... .. +.. +......-..+.-.| .+. .++.|+. +|.|+-+|+++|+..
T Consensus 274 ALDA~TGk~~W~fg~~G~--vd-l~~~~g~~~~g~~~~ts~P~V~~g-~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~ 349 (764)
T TIGR03074 274 ALDADTGKLCEDFGNNGT--VD-LTAGMGTTPPGYYYPTSPPLVAGT-TVVIGGRVADNYSTDEPSGVIRAFDVNTGALV 349 (764)
T ss_pred EEECCCCCEEEEecCCCc--ee-eecccCcCCCcccccccCCEEECC-EEEEEecccccccccCCCcEEEEEECCCCcEe
Confidence 999998875532110000 00 000 000000000111111 122 3445532 688999999999988
Q ss_pred eeeee
Q psy4571 287 KTMRL 291 (437)
Q Consensus 287 ~~~~~ 291 (437)
..+..
T Consensus 350 W~~~~ 354 (764)
T TIGR03074 350 WAWDP 354 (764)
T ss_pred eEEec
Confidence 77653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=81.97 E-value=40 Score=30.67 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=123.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC---CCCC-eeeecc-----CCCCeEEEEEeCCCCc-----------E
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN---VSKP-SHTVDA-----HTAEVNCLSFNPYSEY-----------I 164 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~---~~~~-~~~~~~-----h~~~v~~l~~~~~~~~-----------~ 164 (437)
.-..|+++| .+.+-++....+...+||..... .... +-.+.. .....+.+.|+....+ .
T Consensus 24 N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 24 NAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred ccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 346799999 56666677777889999986221 1112 222221 1345777888753321 2
Q ss_pred EEEEeCCCeEEEEeCCCCce----eeeEeccC-CCce-EEEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCC--CCC
Q psy4571 165 LATGSADKTVALWDLRNLKL----KLHSFESH-KDEI-FQVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQS--TED 234 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~----~~~~~~~h-~~~v-~~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~ 234 (437)
++.+++||+|.-|...-... ....+... .+.| ..+++.+ .+.++.++--..++|.|||-.-...... ..+
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D 182 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID 182 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence 67788999999998643222 12223211 2334 3455543 3565666666789999998654322110 000
Q ss_pred ---CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee------c
Q psy4571 235 ---AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA------S 305 (437)
Q Consensus 235 ---~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------s 305 (437)
...-.+--+..+.+ .-.|+-..-.+++. -=+.|..-|.|-++|.. +..++.+.... .-+.+.-++. .
T Consensus 183 P~iPagyAPFnIqnig~-~lyVtYA~qd~~~~-d~v~G~G~G~VdvFd~~-G~l~~r~as~g-~LNaPWG~a~APa~FG~ 258 (336)
T TIGR03118 183 PALPAGYAPFNVQNLGG-TLYVTYAQQDADRN-DEVAGAGLGYVNVFTLN-GQLLRRVASSG-RLNAPWGLAIAPESFGS 258 (336)
T ss_pred CCCCCCCCCcceEEECC-eEEEEEEecCCccc-ccccCCCcceEEEEcCC-CcEEEEeccCC-cccCCceeeeChhhhCC
Confidence 00000111111111 11222222234443 23456677899999987 44555553211 2233333333 3
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
..|.+|+..-.|++ |..+|..+|+-+..+..
T Consensus 259 ~sg~lLVGNFGDG~-----------InaFD~~sG~~~g~L~~ 289 (336)
T TIGR03118 259 LSGALLVGNFGDGT-----------INAYDPQSGAQLGQLLD 289 (336)
T ss_pred CCCCeEEeecCCce-----------eEEecCCCCceeeeecC
Confidence 46778887778888 89999888887665544
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=81.91 E-value=24 Score=34.40 Aligned_cols=130 Identities=11% Similarity=0.042 Sum_probs=71.0
Q ss_pred eEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcE
Q psy4571 49 AVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKL 128 (437)
Q Consensus 49 ~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v 128 (437)
.++.+-.| .+-.|+.....+.-..+....+.........-+. ..-.......|..+..++ .|..++..+.+|.+
T Consensus 54 N~~~~~gD-~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~----l~P~~~V~feV~~vl~s~-~GS~VaL~G~~Gi~ 127 (741)
T KOG4460|consen 54 NVVFGLGD-ELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQR----LLPINPVLFEVYQVLLSP-TGSHVALIGIKGLM 127 (741)
T ss_pred chhcccCC-EEEEEecCcceEEEEEeccCCCCcccccccccce----eccCCcceEEEEEEEecC-CCceEEEecCCeeE
Confidence 34445555 7888998777776666542222111111000000 000112234677888898 57777777888876
Q ss_pred EEEEcCCC------CCCCCee---ee--------ccCCCCeEEEEEeCCC--CcEEEEEeCCCeEEEEeCCCCce
Q psy4571 129 MIWDTRSH------NVSKPSH---TV--------DAHTAEVNCLSFNPYS--EYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 129 ~vwd~~~~------~~~~~~~---~~--------~~h~~~v~~l~~~~~~--~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.++-.+.- +.++..- ++ ....-.+...+|+|+. ...|..-+.|..|++||+.....
T Consensus 128 vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 128 VMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred EEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 65542210 0111111 10 1112257788999986 33488888999999999987544
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=80.92 E-value=48 Score=30.90 Aligned_cols=105 Identities=11% Similarity=0.219 Sum_probs=54.9
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee----ccCCCCeEEEEEeCC---CCcEEEEEeCC-------
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV----DAHTAEVNCLSFNPY---SEYILATGSAD------- 171 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~~l~sgs~d------- 171 (437)
...|+|.| ++.+|+ +...|.|++++.. +.....+..+ .........++++|+ ..++.++.+..
T Consensus 4 P~~~a~~p-dG~l~v-~e~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 4 PRSMAFLP-DGRLLV-AERSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp EEEEEEET-TSCEEE-EETTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred ceEEEEeC-CCcEEE-EeCCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 46899999 466665 5779999999933 2111122222 234557899999994 34444444422
Q ss_pred -CeEEEEeCCCC-------ceeeeEecc---CCCceEEEEEcCCCCcEEEEEeC
Q psy4571 172 -KTVALWDLRNL-------KLKLHSFES---HKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 172 -g~i~lwd~~~~-------~~~~~~~~~---h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
..|.-|..... +..+..+.. ....-..++|.|+|. ++++.+.
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~-LYvs~G~ 133 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGK-LYVSVGD 133 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSE-EEEEEB-
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCc-EEEEeCC
Confidence 23444444332 111111122 223456799999995 5665553
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=80.26 E-value=52 Score=30.81 Aligned_cols=42 Identities=10% Similarity=-0.048 Sum_probs=20.7
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.+.+||.++.+-.....+. .......+..-++++++.|+.+.
T Consensus 291 ~~e~yd~~~~~W~~~~~lp---~~~~~~~~~~~~~~iyv~GG~~~ 332 (346)
T TIGR03547 291 SSEVYALDNGKWSKVGKLP---QGLAYGVSVSWNNGVLLIGGENS 332 (346)
T ss_pred EeeEEEecCCcccccCCCC---CCceeeEEEEcCCEEEEEeccCC
Confidence 4678888765432221111 11111224455777777777553
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=80.18 E-value=56 Score=32.22 Aligned_cols=56 Identities=11% Similarity=-0.018 Sum_probs=27.3
Q ss_pred CCCeEEEEEeCC----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 261 NEPWVICSVSED----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 261 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+++ +++.++.+ ..+.+||+.+.+-.+.-.............+..-++++++.|+..
T Consensus 328 ~gk-iyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~ 387 (470)
T PLN02193 328 QGK-VWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEI 387 (470)
T ss_pred CCc-EEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCcc
Confidence 455 66666654 458899988764322211100011111122334466777777653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 437 | ||||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 6e-96 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 7e-96 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 9e-96 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 4e-94 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-92 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-90 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 7e-11 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 8e-06 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 7e-11 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 7e-06 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-10 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-10 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-10 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-10 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-10 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-10 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 2e-10 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-10 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 2e-10 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-10 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-10 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-10 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-10 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-10 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 2e-10 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 4e-10 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 4e-10 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 4e-09 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 5e-08 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-07 | ||
| 1iq3_A | 110 | Solution Structure Of The Eps15 Homology Domain Of | 1e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 1e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 7e-05 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 2e-07 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 2e-04 | ||
| 4i79_A | 399 | Crystal Structure Of Human Nup43 Length = 399 | 5e-07 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 5e-07 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 5e-07 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 9e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-06 | ||
| 1fi6_A | 92 | Solution Structure Of The Reps1 Eh Domain Length = | 3e-06 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 3e-06 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 4e-06 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 4e-06 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 5e-06 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 6e-06 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 7e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 7e-06 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 8e-06 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 8e-06 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 3e-05 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 3e-05 | ||
| 3ei1_B | 383 | Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Pho | 7e-05 | ||
| 4a08_B | 382 | Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Dup | 7e-05 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 1e-04 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 1e-04 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 3e-04 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 3e-04 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 3e-04 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 3e-04 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 3e-04 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 4e-04 | ||
| 4gqb_B | 344 | Crystal Structure Of The Human Prmt5:mep50 Complex | 5e-04 | ||
| 2pm9_A | 416 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 5e-04 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 5e-04 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 6e-04 | ||
| 4g56_B | 357 | Crystal Structure Of Full Length Prmt5/mep50 Comple | 7e-04 |
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1IQ3|A Chain A, Solution Structure Of The Eps15 Homology Domain Of A Human Pob1 Length = 110 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|4I79|A Chain A, Crystal Structure Of Human Nup43 Length = 399 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain Length = 92 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3EI1|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Photoproduct Containing Dna-Duplex Length = 383 | Back alignment and structure |
|
| >pdb|4A08|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex ( Purine At D-1 Position) At 3.0 A Resolution (Cpd 1) Length = 382 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex Length = 344 | Back alignment and structure |
|
| >pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 416 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 2e-89
Identities = 164/169 (97%), Positives = 168/169 (99%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILAT
Sbjct: 236 DVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILAT 295
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG
Sbjct: 296 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-33
Identities = 74/275 (26%), Positives = 110/275 (40%), Gaps = 65/275 (23%)
Query: 42 VAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP 101
AE FDDAVEERVINEEYKIWKKNTPFLYDLV+ + L L + +
Sbjct: 8 AAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHA-------LEWPSLTAQWLPDVTKQ 60
Query: 102 FPLSRQDVAWHLLHESLFGSVADDQK--LMIWDTRSHNVSKPSHTVDA------------ 147
+D + H L + G+ D++ L+I V PS
Sbjct: 61 ---DGKDYSVHRL---ILGTHTSDEQNHLLIAS-----VQLPSEDAQFDGSHYDNEKGEF 109
Query: 148 -----------------HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK----- 185
H EVN + P + ++AT + V ++D K
Sbjct: 110 GGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSG 169
Query: 186 ----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
H+ E + + W+P+ L S+ D + +WD++ +E DA
Sbjct: 170 ECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA------ 223
Query: 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
I GHTA + D +W+ + SV++D +
Sbjct: 224 -KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 24/193 (12%)
Query: 94 IIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-------NVSKPSHTVD 146
I + + + + ++++D H +P +
Sbjct: 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR 178
Query: 147 AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK------LHSFESHKDEIFQVQ 200
H E LS+NP L + S D T+ LWD+ + + F H + V
Sbjct: 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVA 238
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
W +E++ S D++L +WD + + HTA+++ S+NP
Sbjct: 239 WHLLHESLFGSVADDQKLMIWDTR-----------NNNTSKPSHTVDAHTAEVNCLSFNP 287
Query: 261 NEPWVICSVSEDN 273
+++ + S D
Sbjct: 288 YSEFILATGSADK 300
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 4e-23
Identities = 31/151 (20%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
++++ E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+
Sbjct: 283 LSFNPYSEFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASS 340
Query: 169 SADKTVALWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
D+ + +WDL + + L H +I W+P+ I+ S D
Sbjct: 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246
+ VW ++ E ++ + P L +
Sbjct: 401 NIMQVWQMA---ENVYNDEEPEIPASELETN 428
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTR-----------SHNVSKPSHTVDAHTAEVNCLSF 157
V W +E++ S D++L +WD + HTA+++ S+
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386
Query: 158 NPYSEYILATGSADKTVALWDLR-------NLKLKLHSFESHK 193
NP +I+ + S D + +W + ++ E++
Sbjct: 387 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETNT 429
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC 154
D +W+ + SV++D + +W + + + A E N
Sbjct: 383 DFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETNT 429
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 17/158 (10%)
Query: 124 DDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182
D+ L ++ T +N H++ V + FN + +LA+G + + +WD+
Sbjct: 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146
Query: 183 K--------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
L S DE+ + W+ + AS+G+ +WDL K +E
Sbjct: 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL-KAKKEVIHLS 205
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
G ++S W+P + + +
Sbjct: 206 YTSPN-------SGIKQQLSVVEWHPKNSTRVATATGS 236
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 8e-23
Identities = 42/229 (18%), Positives = 80/229 (34%), Gaps = 23/229 (10%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVS---KPSHTVDAHTAEVNCLSFNPYSEYIL 165
+AW+ +F S IWD ++ + +++ + ++P + +
Sbjct: 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230
Query: 166 ATGSA---DKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
AT + D ++ +WDLRN L + + H+ I + W +E +L SSG D + +W
Sbjct: 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290
Query: 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281
+ E+ S + P P + S DN ++ +
Sbjct: 291 NPES-AEQLSQFP-------------ARGNWCFKTKFAPEAPDLFACASFDNKIEVQ--T 334
Query: 282 TDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330
+ T T+ + S T S P+ + W G
Sbjct: 335 LQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYG 383
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 6e-22
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 26/179 (14%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDT------RSHNVSKPSHTVDAHTAEVNCLSFNPYSE 162
V ++ +++ S ++ ++ IWD S+ + EV L++N
Sbjct: 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA 178
Query: 163 YILATGSADKTVALWDLRNLKLKLH-----SFESHKDEIFQVQWSPHNETILAS---SGT 214
++ A+ + ++WDL+ K +H K ++ V+W P N T +A+ S
Sbjct: 179 HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238
Query: 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D + +WDL + L ++ GH I W + ++ S DN
Sbjct: 239 DPSILIWDL------------RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN 285
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 4e-13
Identities = 21/156 (13%), Positives = 53/156 (33%), Gaps = 22/156 (14%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G+ + + + S+ + +H +S + A S D ++ LW L
Sbjct: 1 GA--MGSMVKLAE-----FSRTATFAWSHDKIPLLVSGTVSGT-VDANFSTDSSLELWSL 52
Query: 180 --RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
+ + + S + + WS +N I+A + + L ++ ++
Sbjct: 53 LAADSEKPIASL-QVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAI------- 103
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ H++ + +N + V+ S +
Sbjct: 104 ---NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNG 136
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 3e-22
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS--EYILA 166
V W+ +F S + D+ L +WDT + + + + V +P S ++A
Sbjct: 105 VQWYPHDTGMFTSSSFDKTLKVWDTNT---LQTADVFN-FEETVYSHHMSPVSTKHCLVA 160
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
G+ V L DL++ H + H+ EI V WSP + ILA++ D R+ +WD+ +
Sbjct: 161 VGTRGPKVQLCDLKSGSC-SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219
Query: 227 GEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
T D +G + + H K++ + + ++ +V DN
Sbjct: 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL-TVGTDN 267
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 7e-18
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 29/165 (17%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN-- 181
K+ + D +S SH + H E+ +S++P +YILAT SAD V LWD+R
Sbjct: 164 RGPKVQLCDLKSG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220
Query: 182 -------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
+ + +H ++ + ++ + L + GTD R+ +W+ S GE
Sbjct: 221 GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSN-GE 278
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
G + V +
Sbjct: 279 NTLV---NYGKV--CNNSKKGLKFTVSCGCSSE----FVFVPYGS 314
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 4e-17
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 32/167 (19%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + +K H +N L P + +G +D + L+DL
Sbjct: 18 LRRAESTRRVLGLEL---NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLE 74
Query: 181 NLKLK------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
N + + H+ + VQW PH+ + SS D+ L VWD + +
Sbjct: 75 NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-LQ 133
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--NEPWVICSVSEDN 273
+ +P + ++ +
Sbjct: 134 TADVF--------------NFEETVYSHHMSPVSTKHCLVAVGTRGP 166
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-14
Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 8/102 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
V + ++ S + + H V+C F + + +GS D + W
Sbjct: 309 FVPYGSTIAVYTVYS---GEQITMLKGHYKTVDCCVFQSNFQEL-YSGSRDCNILAWVPS 364
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ + + Q +P E +SS + W
Sbjct: 365 LYE----PVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWS 402
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 4e-13
Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 2/109 (1%)
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
L A+ T + L K H I + P + S G+D + ++DL
Sbjct: 16 LRLRRAESTRRVLGLELNKD-RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLE 74
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
QS + H + W P++ + S S D
Sbjct: 75 N-SSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 14/106 (13%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 121 SVADDQKLMIWDTRS-HNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
+V D ++ +W++ + N + + S T+A++
Sbjct: 262 TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF-VFVPYGSTIAVYT 320
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ + + + + H + + N L S D + W S
Sbjct: 321 VYSGEQ-ITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPS 364
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 1e-21
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI-LATGSADKTVALWDL 179
+ + D+K+ IWD+ + K HT D H+ +VNC F S ++ LATGS D + LWDL
Sbjct: 674 TCSADKKVKIWDSATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDL 730
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ ++ H + + ++SP ++ +LAS D L +WD+ E+ + + +
Sbjct: 731 NQKEC-RNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRS-ANERKSINVKRFF 787
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
+ SW+ + +I +++ +
Sbjct: 788 LSSEDPPEDVEVIVKCCSWSADGDKII-VAAKNKV 821
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 9e-18
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 11/141 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +W+ + + H V + + + ++ SADKT +W
Sbjct: 1060 SWSFDGTVKVWNVIT---GRIERDFTCHQGTVLSCAISSDATKF-SSTSADKTAKIWSFD 1115
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
L LH + H + +S + +LA+ + + +W++S G+ +
Sbjct: 1116 LLSP-LHELKGHNGCVRCSAFSL-DGILLATGDDNGEIRIWNVSD-GQLLHSCAPISVEE 1172
Query: 241 ELLFIHGGHTAKISDFSWNPN 261
H ++D ++P+
Sbjct: 1173 GT----ATHGGWVTDVCFSPD 1189
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 84.1 bits (208), Expect = 2e-17
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+V + + L + ++ A+V+C +P+ EY+ A G D + + +L
Sbjct: 939 AVDNIRGLQLIAGKTG------QIDYLPEAQVSCCCLSPHLEYV-AFGDEDGAIKIIELP 991
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
N ++ S HK + +Q++ + L SS D + VW + + G
Sbjct: 992 NNRV-FSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVW------------NWQTGDY 1037
Query: 241 ELLFIHGGHTAKISDFSWNPN 261
L H + DF +
Sbjct: 1038 VFLQ---AHQETVKDFRLLQD 1055
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 9e-17
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S D+ L ++ + + + AH EV C +F+ YI AT SADK V +WD
Sbjct: 632 SCGADKTLQVFKAETG---EKLLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIWDSA 687
Query: 181 NLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
KL +H+++ H +++ ++ N +LA+ D L +WDL++ E ++T
Sbjct: 688 TGKL-VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECRNT------- 738
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG 299
+F GHT ++ ++P++ + S S D ++ + + ++ K++ + +
Sbjct: 739 ---MF---GHTNSVNHCRFSPDDELLA-SCSADGTLRLWDVRSANERKSINVKRFFLSSE 791
Query: 300 ISSTASPTASSTASESP 316
S S
Sbjct: 792 DPPEDVEVIVKCCSWSA 808
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 6e-15
Identities = 23/153 (15%), Positives = 54/153 (35%), Gaps = 23/153 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S ++D + +W+ ++ + AH V S L + S D TV +W++
Sbjct: 1020 SSSEDSVIQVWNWQT----GDYVFLQAHQETVKDFRLLQDSR--LLSWSFDGTVKVWNVI 1073
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
++ F H+ + S + T +S+ D+ +W +
Sbjct: 1074 TGRI-ERDFTCHQGTVLSCAISS-DATKFSSTSADKTAKIW------------SFDLL-- 1117
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L GH + +++ + + + ++
Sbjct: 1118 SPLHELKGHNGCVRCSAFSLDGILLA-TGDDNG 1149
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 2e-14
Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 28/163 (17%)
Query: 121 SVADDQKLMIWDTRS----------HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
S + D L +WD RS + V C S++ + I +
Sbjct: 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI-IVAAK 818
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
+K + L+D+ L H I +SP++ + + + +W
Sbjct: 819 NKVL-LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA-VIALSQYCVELW--------- 867
Query: 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + + GH + + ++P+ + + S+D
Sbjct: 868 ---NIDSR--LKVADCRGHLSWVHGVMFSPDGSSFL-TASDDQ 904
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 2e-14
Identities = 27/151 (17%), Positives = 61/151 (40%), Gaps = 18/151 (11%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+ + W + + V HT V F+ + I A+ ADKT+ ++ +
Sbjct: 590 TGRLYLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRI-ASCGADKTLQVFKAETGE 648
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
L ++H+DE+ +S + I A+ D+++ +W D+ G +L+
Sbjct: 649 K-LLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIW------------DSATG--KLV 692
Query: 244 FIHGGHTAKISDFSWNPN-EPWVICSVSEDN 273
+ H+ +++ + ++ + S D
Sbjct: 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 3e-14
Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 30/162 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ IW P H + H V C +F+ + ATG + + +W++
Sbjct: 1102 STSADKTAKIWSFDL---LSPLHELKGHNGCVRCSAFSLDGILL-ATGDDNGEIRIWNVS 1157
Query: 181 NLKL--------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ +L +H + V +SP ++T++++ G L W+++ G+ T
Sbjct: 1158 DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGY---LKWWNVAT-GDSSQT 1213
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
+ + +P+ + +V I
Sbjct: 1214 ---------FY----TNGTNLKKIHVSPDFRTYV-TVDNLGI 1241
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 26/153 (16%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ +DDQ + +W+ K + + F + + + L +
Sbjct: 899 TASDDQTIRVWE-----TKKVCKNSAIVLKQEIDVVFQENETMV-LAVDNIRGLQLIAGK 952
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
++ + ++ SPH E + A D + + +L S+
Sbjct: 953 TGQI----DYLPEAQVSCCCLSPHLEYV-AFGDEDGAIKIIELPN-NRVFSSGV------ 1000
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + + + +I S SED+
Sbjct: 1001 -------GHKKAVRHIQFTADGKTLI-SSSEDS 1025
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 16/111 (14%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 121 SVADDQKLMIWDT------RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174
+ D+ ++ IW+ S H V + F+P S+ ++ SA +
Sbjct: 1144 TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLV---SAGGYL 1200
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
W++ +F ++ + ++ SP + + L++ + +
Sbjct: 1201 KWWNVATGDS-SQTFYTNGTNLKKIHVSP-DFRTYVTVDNLGILYILQVLE 1249
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 14/75 (18%)
Query: 115 HESLFGSVA---DDQKLM-------IWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
H V D + L+ W+ + S T + + + +P
Sbjct: 1177 HGGWVTDVCFSPDSKTLVSAGGYLKWWNVATG---DSSQTFYTNGTNLKKIHVSPDFRTY 1233
Query: 165 LATGSADKTVALWDL 179
T + + +
Sbjct: 1234 -VTVDNLGILYILQV 1247
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 15/161 (9%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWDLRN 181
D+ + ++D R+ + V L F+ L S + ++D+R
Sbjct: 188 DNGDIKLFDLRNMAL----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243
Query: 182 LK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--- 234
S ++HK ++QV+ P N + ++G LH+W + +
Sbjct: 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGI 303
Query: 235 --AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
G LL T IS W+P++ + S D
Sbjct: 304 EMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ 344
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 2e-16
Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 20/125 (16%)
Query: 121 SVADDQKLMIWDTRSHNVSKP--SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
+ + + K ++D R+ + +K S + AH + V + P + + T + LW
Sbjct: 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288
Query: 179 LRNLKLK------------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
+ L + I + WSP + S D+ + V
Sbjct: 289 YEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRV 348
Query: 221 WDLSK 225
++K
Sbjct: 349 LIVTK 353
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 121 SVADDQKLMIWDTRSHNVSKPS------HTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174
+ + D + +WD R + + ++N E ++ G + +
Sbjct: 134 TGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDI 192
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQST 232
L+DLRN+ L+ + K+ + +++ + L ++ + + HV+D+ T
Sbjct: 193 KLFDLRNMALR--WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM-------RT 243
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ G H + + P + +
Sbjct: 244 QHPTKG--FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG 282
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 21/160 (13%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS--EYILATGSADKTVALWDLRN 181
+ +++ + ++ + C +F S + LATG + +W+L
Sbjct: 42 GTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99
Query: 182 LKLKLHSFESHKDEIFQVQW------SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
++ ++S + HK+ I + + + D + VWD + + + +
Sbjct: 100 PEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158
Query: 236 EDGPPELLFIHGGHTAKISDFS--WNPNEPWVICSVSEDN 273
G F +N E +C+ ++
Sbjct: 159 VQG-------ENKRDCWTVAFGNAYNQEERV-VCAGYDNG 190
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 24/142 (16%), Positives = 41/142 (28%), Gaps = 25/142 (17%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATG---SADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
H V + P S + G + L+++++ LKL I
Sbjct: 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCG 71
Query: 200 Q---WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256
S + LA+ LH+W+L + P ++ GH I+
Sbjct: 72 TFGATSL-QQRYLATGDFGGNLHIWNL-------------EAPEMPVYSVKGHKEIINAI 117
Query: 257 SWNPNEPW-----VICSVSEDN 273
I + S D
Sbjct: 118 DGIGGLGIGEGAPEIVTGSRDG 139
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S D + + + S V T ++ L ++P + S D+TV + +
Sbjct: 296 SKKDSEGIEMGVAGS---VSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352
Query: 181 NL 182
L
Sbjct: 353 KL 354
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 26/182 (14%)
Query: 115 HESLFGSVA------------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE 162
+ + V +L++ H A+V FNP +
Sbjct: 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG----HEIFKEKLHKAKVTHAEFNPRCD 217
Query: 163 YILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
+++AT S D TV LWDLRN+K K + H+ + ++P + T L ++ + V
Sbjct: 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277
Query: 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280
+ + + L W+P ++ D+ +
Sbjct: 278 YSSYDWSKPDQIIIHPHRQFQHLTPIKAT--------WHPMYDLIVAGRYPDDQLLLNDK 329
Query: 281 ST 282
T
Sbjct: 330 RT 331
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 18/166 (10%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+ WH H + + +++WD N + + FN ++ L
Sbjct: 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNK-TSFIQGMGPGDAITGMKFNQFNTNQLFVS 137
Query: 169 SADKTVALWDL-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S L D ++ +S V S + +LA+ + RL + L G
Sbjct: 138 SIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD--G 194
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E E H AK++ +NP W++ + S D
Sbjct: 195 HEIFKEK-------------LHKAKVTHAEFNPRCDWLMATSSVDA 227
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 22/150 (14%), Positives = 40/150 (26%), Gaps = 17/150 (11%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR-NLK 183
Q+ I +S K T V L ++P +A GS + LWD K
Sbjct: 52 LQEPFIRSLKS---YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK 108
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
D I ++++ N L S + D S ++
Sbjct: 109 TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------------SVIQVF 156
Query: 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + ++ +
Sbjct: 157 AKTDSWDYWYCCVDVSVS-RQMLATGDSTG 185
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 5e-15
Identities = 28/180 (15%), Positives = 50/180 (27%), Gaps = 28/180 (15%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
++ + L + + D + +WD R+ H VN FNP L T
Sbjct: 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT 269
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDE------IFQVQWSPHNETILASSGT-------- 214
+ ++ + K H + W P + I+A
Sbjct: 270 DQRNEIRVYSSYDWS-KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLND 328
Query: 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
R + ++D + G IS ++P + S NI
Sbjct: 329 KRTIDIYDANS-GGLVHQ-----------LRDPNAAGIISLNKFSPTGDV-LASGMGFNI 375
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 16/117 (13%)
Query: 121 SVADDQKLMIWDTRS-----------HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169
+ ++ ++ + H + + A + L +
Sbjct: 268 TTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLN 327
Query: 170 ADKTVALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+T+ ++D + L +H I ++SP +LAS G + +W+
Sbjct: 328 DKRTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSP-TGDVLAS-GMGFNILIWNRE 381
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL---- 179
L++ ++ V K V HTA V +++ P+++ ++A+GS D TV +W++
Sbjct: 56 GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115
Query: 180 --RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
L+ + + E H + V W P + +L S+G D + VWD+ G T +
Sbjct: 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GAAVLTLGPD- 173
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
H I W+ + IC+ D
Sbjct: 174 ----------VHPDTIYSVDWSRDGAL-ICTSCRDK 198
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 5e-21
Identities = 28/120 (23%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWD----TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+AW ++++ S ++D +M+W+ + +P T++ HT V ++++P ++
Sbjct: 86 DIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN 145
Query: 164 ILATGSADKTVALWDLRNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+L + D + +WD+ L + H D I+ V WS + ++ +S D+R+ V +
Sbjct: 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIE 204
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 7e-13
Identities = 26/168 (15%), Positives = 61/168 (36%), Gaps = 17/168 (10%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH +++ S D +++WD + + + D H + + ++ I T
Sbjct: 137 VAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIYSVDWSRDGALI-CTS 194
Query: 169 SADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETIL--ASSGTDRRLHVWDLSK 225
DK V + + R + H+ + + + S ++R++ +WD
Sbjct: 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ E S ++ ++ + ++P+ V D+
Sbjct: 255 LEEPLSLQEL------------DTSSGVLLPFFDPDTNIVYLCGKGDS 290
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 42/215 (19%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYSEYILATG---SAD 171
+L + D+++ + + R D + F IL TG ++
Sbjct: 189 ALICTSCRDKRVRVIEPRK---GTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSE 244
Query: 172 KTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
+ VALWD ++L+ L E + + P + D + +
Sbjct: 245 RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF--------- 295
Query: 231 STEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289
+ P L ++ + P V++ I + Y
Sbjct: 296 ---EITSEAPFLHYLSMFSSKESQRGMGYMPKR---GLEVNKCEIARFY------KLHER 343
Query: 290 RLDSI-----RSNGGISS-----TASPTASSTASE 314
+ + I R + TA P + TA E
Sbjct: 344 KCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEE 378
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 15/93 (16%)
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
++++ +++S +P ++ + V L K G + P
Sbjct: 27 DVRVSQTTWDSGF-----CAVNPKFMALICEASGGGAFLVLPLGKTGR------VDKNVP 75
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ GHTA + D +W P+ VI S SED
Sbjct: 76 LVC----GHTAPVLDIAWCPHNDNVIASGSEDC 104
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 3e-20
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+ + I+D S T+ H A V CLS+N + +L++GS + D+R
Sbjct: 154 GNGLVDIYDVES---QTKLRTMAGHQARVGCLSWNRH---VLSSGSRSGAIHHHDVRIAN 207
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
++ + + H E+ + W + LAS G D + +WD
Sbjct: 208 HQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDAR--------------SSIPK 252
Query: 244 FIHGGHTAKISDFSWNPNEPWVICSVS 270
F H A + +W P + ++ +
Sbjct: 253 FTKTNHNAAVKAVAWCPWQSNLLATGG 279
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 8e-15
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 21/153 (13%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT--GSADKTVALWDLRN 181
+D + IWD RS S P T H A V +++ P+ +LAT G+ DK + W+
Sbjct: 237 NDNVVQIWDARS---SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+++ ++ ++ + WSPH++ I+++ G D L +W S G + +
Sbjct: 294 GAR-VNTVDAG-SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD------- 344
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
H ++ + +P+ + + + D
Sbjct: 345 -----IPAHDTRVLYSALSPDGRI-LSTAASDE 371
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 109 VAW-----HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
VAW +LL G D+++ W+ + +TVDA + +V L ++P+S+
Sbjct: 265 VAWCPWQSNLL---ATGGGTMDKQIHFWNAAT---GARVNTVDAGS-QVTSLIWSPHSKE 317
Query: 164 ILAT-GSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
I++T G D +++W + L K +H + SP + +++ +D L W
Sbjct: 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL-STAASDENLKFW 376
Query: 222 DL 223
+
Sbjct: 377 RV 378
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 139 SKPSHTVDA--HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196
+ P +DA + + + ++A + ++ V +W+ + + + +
Sbjct: 79 TTPERVLDAPGIIDDYYLNLLDWSNLNVVA-VALERNVYVWNADSGSVSALAETDESTYV 137
Query: 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256
V+WS + + L+ + + ++D+ + T GH A++
Sbjct: 138 ASVKWSH-DGSFLSVGLGNGLVDIYDVES-QTKLRT-------------MAGHQARVGCL 182
Query: 257 SWNPNEPWVICSVSEDN 273
SWN + V+ S S
Sbjct: 183 SWNRH---VLSSGSRSG 196
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
S G D L IW S ++K + AH V + +P + +T ++D+ +
Sbjct: 320 STHGF--PDNNLSIWSYSSSGLTK-QVDIPAHDTRVLYSALSPDGRIL-STAASDENLKF 375
Query: 177 WDLRNLKLKLHSFESHKDEIFQV 199
W + + K +
Sbjct: 376 WRVYDGDHVKRPIPITKTPSSSI 398
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 9e-20
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+DD ++ +++ + + +AH + ++ +P Y+ +GS D TV LW+
Sbjct: 72 VGSDDFRIRVFNYNTG---EKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWE 127
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
N +FE H+ + V ++P + + AS DR + VW L + T
Sbjct: 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ-STPNFT-------- 178
Query: 241 ELLFIHGGHTAKIS--DFSWNPNEPWVICSVSEDN 273
+ G ++ D+ P++P+ + + S+D
Sbjct: 179 ----LTTGQERGVNYVDYYPLPDKPY-MITASDDL 208
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 6e-15
Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 19/150 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
++ IW+ + ++ V F +I GS D + +++ +
Sbjct: 33 YSGRVEIWNYETQ---VEVRSIQVTETPVRAGKFIARKNWI-IVGSDDFRIRVFNYNTGE 88
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
K+ FE+H D I + P + + S D + +W+ L
Sbjct: 89 -KVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWEN-NW------------ALE 133
Query: 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + ++NP +P S D
Sbjct: 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 3e-14
Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 35/183 (19%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ +DD + IWD ++ T++ H + V+ F+P I +GS D T+ +W+
Sbjct: 203 TASDDLTIKIWDYQT---KSCVATLEGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSS 258
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL----------------- 223
K+ + + + + P +SG D V L
Sbjct: 259 TYKV-EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVW 317
Query: 224 ----------SKIGEEQSTEDAEDGPPELLFIH--GGHTAKISDFSWNPNEPWVICSVSE 271
+ E+ E P L G + +PN +V V +
Sbjct: 318 SGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV-TVVGD 376
Query: 272 DNI 274
Sbjct: 377 GEY 379
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 7e-13
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSE-YILA 166
VA++ S F S D+ + +W S P+ T+ VN + + P + +
Sbjct: 146 VAFNPKDPSTFASGCLDRTVKVWSLGQ---STPNFTLTTGQERGVNYVDYYPLPDKPYMI 202
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
T S D T+ +WD + + + E H + + P I S D L +W+ S
Sbjct: 203 TASDDLTIKIWDYQTKSC-VATLEGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSST- 259
Query: 227 GEEQST 232
+ + T
Sbjct: 260 YKVEKT 265
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 18/131 (13%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
T + V + F+P +E + T V +W+ + S + + + ++
Sbjct: 7 KTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVE-VRSIQVTETPVRAGKFI 64
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262
I D R+ V+ + G E + H I + +P +
Sbjct: 65 ARKNWI-IVGSDDFRIRVF------------NYNTG--EKVVDFEAHPDYIRSIAVHPTK 109
Query: 263 PWVICSVSEDN 273
P+V+ S S+D
Sbjct: 110 PYVL-SGSDDL 119
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 1e-19
Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
++ ++ + + + +N + F P + + +GS D TVA+++
Sbjct: 121 VGEGRERFGHVFLFDTGT---SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 177
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
K +F H + V+++P + ++ AS+G D + +++ G + + +
Sbjct: 178 PPFKF-KSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNG-VDGTKTGVFEDDSLK 234
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
H+ + +W+P+ + S S D
Sbjct: 235 NV------AHSGSVFGLTWSPDGTKIA-SASADK 261
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 6e-18
Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 21/157 (13%)
Query: 121 SVADDQKLMIWDTRS----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
S D +++++ S AH+ V L+++P I A+ SADKT+ +
Sbjct: 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI-ASASADKTIKI 265
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
W++ LK++ + E Q+ + + S + ++ +
Sbjct: 266 WNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL-VSISANGFINFVNPEL----------- 313
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + GH I+ S + + + S +
Sbjct: 314 ---GSIDQVRYGHNKAITALSSSADGKTLF-SADAEG 346
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 7e-17
Identities = 15/154 (9%), Positives = 44/154 (28%), Gaps = 18/154 (11%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S++ + + + H + LS + + + + A+ + WD+
Sbjct: 299 SISANGFINFVNPELG---SIDQVRYGHNKAITALSSSADGKTL-FSADAEGHINSWDIS 354
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ H I ++ + + L + D L V G
Sbjct: 355 TGISNRVFPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVP-----------AGGSGVD 401
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
+ +++ + + + + + +I
Sbjct: 402 SSKAVANKLSSQPLGLAVSADGDIAV-AACYKHI 434
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 9e-17
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ +K++ + ++ +++ HTA+V C+S++P + + ATGS D +V +W++
Sbjct: 508 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL-ATGSLDNSVIVWNMN 566
Query: 181 N-LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ +H NET + S+G D + W++
Sbjct: 567 KPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNVP 610
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 3e-16
Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 23/154 (14%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
A + + I+ K + ++ +C++ + +++ A G D V ++ L
Sbjct: 427 VAACYKHIAIYSH-----GKLTEVPISYN--SSCVALSNDKQFV-AVGGQDSKVHVYKLS 478
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-P 239
+ H EI V +S N L ++ R++ + +
Sbjct: 479 GASVSEVKTIVHPAEITSVAFSN-NGAFLVATDQSRKVIPY------------SVANNFE 525
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
HTAK++ SW+P+ + + S DN
Sbjct: 526 LAHTNSWTFHTAKVACVSWSPDNVRLA-TGSLDN 558
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 4e-14
Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 23/158 (14%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
+ + + + + H+ + +P Y A+G V +W
Sbjct: 34 QYCNGTSVYTVPVGSLTD------TEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIW 86
Query: 178 DLRN-LKLKLHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLHVWDLSKIGEEQSTEDA 235
D + + + + W ++ I G +R HV+
Sbjct: 87 DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF------------LF 134
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ G G ++ + P+ P+ I S S+DN
Sbjct: 135 DTG--TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN 170
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 6e-12
Identities = 22/153 (14%), Positives = 55/153 (35%), Gaps = 22/153 (14%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+V+ D L + V + +++ L+ + + +A + K +A++
Sbjct: 383 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD--IAVAACYKHIAIYSHG 440
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
L S+ S V S ++ +A G D ++HV+
Sbjct: 441 KLTEVPISYNSS-----CVALSN-DKQFVAVGGQDSKVHVY------------KLSGASV 482
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ H A+I+ +++ N +++ + +
Sbjct: 483 SEVKTI-VHPAEITSVAFSNNGAFLV-ATDQSR 513
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 6e-19
Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 11/160 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL- 179
+ D+ +W + KP+ + C+ + P +E A GS + +++
Sbjct: 69 TCGTDRNAYVWTLKG-RTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFE 126
Query: 180 --RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
+ + H + + + + W P N +LA+ D + ++ E+
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 185
Query: 238 GPP----ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
G EL+F + ++ N + VS D+
Sbjct: 186 GSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAWVSHDS 224
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 1e-14
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 15/154 (9%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++ ++ I++ + + H + H +V + + P S I T D+ +W L+
Sbjct: 25 ICPNNHEVHIYEKSGNKWVQ-VHELKEHNGQVTGVDWAPDSNRI-VTCGTDRNAYVWTLK 82
Query: 181 NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
K V+W+P NE A R + + + E+
Sbjct: 83 GRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYF----------EQENDW 131
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
I + + W+PN + + S D
Sbjct: 132 WVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDF 164
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNE 206
++C ++N I A + V +++ K +++H + H ++ V W+P +
Sbjct: 7 LVEPISCHAWNKDRTQI-AICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 65
Query: 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266
I + GTDR +VW + + + W PNE
Sbjct: 66 RI-VTCGTDRNAYVW------------TLKGRTWKPTLVILRINRAARCVRWAPNEKK-F 111
Query: 267 CSVSEDN 273
S
Sbjct: 112 AVGSGSR 118
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 6e-11
Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 21/135 (15%)
Query: 120 GSVADDQKLMIWDTRSHNV-SKPSHTVDA--------------HTAEVNCLSFNPYSEYI 164
GS D K I+ V +P+ T V+ + F+ +
Sbjct: 160 GS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSR 216
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+A S D TV L D + + S + V + + + ++G D ++
Sbjct: 217 VAWVSHDSTVCLADADKKMA-VATLASETLPLLAVTFITESSLV--AAGHDCFPVLFTYD 273
Query: 225 KIGEEQSTEDAEDGP 239
+ S D P
Sbjct: 274 SAAGKLSFGGRLDVP 288
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D +++ ++ + + S + K +
Sbjct: 264 DCFPVLFT---YDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320
Query: 185 KLHSFESHKDEIFQVQWSP---HNETILASSGTDRRLHVWDLS 224
L S HK+ + Q+ + ++G D + +WD+
Sbjct: 321 -LDSL--HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP---YSEYILATGSADKTVALWDLR 180
D + + ++ H V+ +S T D +++WD+R
Sbjct: 306 DKKASSEGSAAA---GAGLDSL--HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360
Query: 181 NLKLKL 186
+L+ L
Sbjct: 361 SLESAL 366
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 6e-19
Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 121 SVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSE-YILATGSADKTVALWD 178
+ + DQ + ++ + + S + AH + + + + I+A+ S DKTV LW+
Sbjct: 28 TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87
Query: 179 LRN--------LKLKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEE 229
KL + K ++ V+++P + LA G D L ++D + +
Sbjct: 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALE-PSD 146
Query: 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV--ICSVSEDN 273
+ L H SW P+ + + +
Sbjct: 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ 192
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 4e-17
Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 11/174 (6%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
H V+ + ++ Y ++ AT S+D+ + ++ L S+ +H I + W+
Sbjct: 10 HDDLVHDVVYDFYGRHV-ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP 68
Query: 205 NE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263
I+AS+ D+ + +W+ E+ E+ L + + P
Sbjct: 69 EYGRIIASASYDKTVKLWE-----EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL 123
Query: 264 -WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316
+ + D I++ Y SD ++ L S I + S P
Sbjct: 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP 177
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 37/190 (19%)
Query: 109 VAW-HLLHESLFGSVADDQKLMIWDT------RSHNVSKPSHTVDAHTAEVNCLSFNPYS 161
+ W + + S + D+ + +W+ S T++ + + F P
Sbjct: 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH 122
Query: 162 E-YILATGSADKTVALWDLRN------------LKLKLHSFESHKDEIFQVQWSP--HNE 206
LA D + L+D +K+ +H F + W P +
Sbjct: 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182
Query: 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV- 265
LA S ++ + +DG + GH + I SW P+
Sbjct: 183 EKLAVSALEQAIIYQ------------RGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230
Query: 266 --ICSVSEDN 273
I + +D
Sbjct: 231 QLIATGCKDG 240
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 108 DVAW---HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY- 163
++W L + D ++ I+ +++ + + + N F+ ++
Sbjct: 219 SISWAPSIGRWYQLIATGCKDGRIRIFK-----ITEKLSPLASEESLTNSNMFDNSADVD 273
Query: 164 ILATGSAD----KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219
+ A G +D + L ++L L + H E++ V W+ TIL+S+G D ++
Sbjct: 274 MDAQGRSDSNTEEKAELQSNLQVEL-LSEHDDHNGEVWSVSWNL-TGTILSSAGDDGKVR 331
Query: 220 VWDLS 224
+W +
Sbjct: 332 LWKAT 336
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 29/175 (16%)
Query: 109 VAWH--LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP---YSEY 163
++W A +Q ++ + + + + H + + +S+ P
Sbjct: 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAPSIGRWYQ 231
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETI---LASSGTDRRL 218
++ATG D + ++ + KL S + S + + S T+ +
Sbjct: 232 LIATGCKDGRIRIFKITE---KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288
Query: 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ ++ ELL H H ++ SWN ++ S +D
Sbjct: 289 ELQSNLQV--------------ELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDG 328
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
++K + + D H EV +S+N IL++ D V L
Sbjct: 277 QGRSDSNTEEKAELQSNLQ---VELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRL 332
Query: 177 WDLRNLKL--KLHSFESHK 193
W + + +
Sbjct: 333 WKATYSNEFKCMSVITAQQ 351
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 2e-18
Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 18/166 (10%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AWH H S + +M+W+ + + L FNP +
Sbjct: 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYAS 183
Query: 169 SADKTVALWDLR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S + T L D + N+ S ++ + S + ++ + + + ++ G
Sbjct: 184 SMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMD--G 240
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+E H K++ + NP W + + S D
Sbjct: 241 KELWN-------------LRMHKKKVTHVALNPCCDWFLATASVDQ 273
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 31/173 (17%), Positives = 66/173 (38%), Gaps = 18/173 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + +++ + K + H +V ++ NP ++ LAT S D+TV +WDLR
Sbjct: 226 TGDNVGNVILLNMDG----KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281
Query: 181 NLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
++ K H+ + +SP + L ++ + V+ S+ +
Sbjct: 282 QVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQ-WDCPLGLIPHPH 339
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
H H I +W+P ++ D + T + +T+ +
Sbjct: 340 R------HFQHLTPIK-AAWHPRYNLIVVGRYPDP---NFKSCTPYELRTIDV 382
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 13/119 (10%), Positives = 34/119 (28%), Gaps = 17/119 (14%)
Query: 121 SVADDQKLMIWDTRS---------HNVSKPSHT-----VDAHTAEVNCLSFNPYSEYILA 166
+ ++ ++ H H + + P +
Sbjct: 313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSC 372
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ-WSPHNETILASSGTDRRLHVWDLS 224
T +T+ ++D + K+ ++ I + ++P LA S + +W
Sbjct: 373 TPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNP-MGDTLA-SAMGYHILIWSQQ 429
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 7e-18
Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D +W + + + T+D HT + + + +++Y TGSAD ++ LWD+
Sbjct: 49 SCSKDSSASVWYSLN---GERLGTLDGHTGTIWSIDVDCFTKYC-VTGSADYSIKLWDVS 104
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASS----GTDRRLHVWDLSKIGEEQSTEDAE 236
N + + +++ + +V++SP LA ++++++ +
Sbjct: 105 NGQC-VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIER-DSATHELTKV 161
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
P I + W+ ++I + +D
Sbjct: 162 SEEPIHKIITHEGLDAATVAGWSTKGKYII-AGHKDG 197
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 8e-16
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 23/173 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAE--VNCLSFNPYSEYILATGSADKTVALWD 178
+ D S +P H + H ++ +YI G D ++ +D
Sbjct: 148 EIERDSATHELTKVS---EEPIHKIITHEGLDAATVAGWSTKGKYI-IAGHKDGKISKYD 203
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ N + S + H+ I +Q+SP + T +S D + D
Sbjct: 204 VSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLV------------DVSTL 250
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
++L + ++ P + ++I S + R
Sbjct: 251 --QVLKKYETDCP-LNTAVITPLKEFII-LGGGQEAKDVTTTSANEGKFEARF 299
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 16/157 (10%), Positives = 49/157 (31%), Gaps = 22/157 (14%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++ SH + + H + + +N + + + S D + ++W
Sbjct: 7 HHHHSSGENLYFQGSH---MKAIKLTGHERPLTQVKYNKEGDLL-FSCSKDSSASVWYSL 62
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
N + L + + H I+ + + D + +W D +G
Sbjct: 63 NGER-LGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLW------------DVSNG-- 106
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277
+ + + ++P + ++ ++ +
Sbjct: 107 QCVATWKSPVP-VKRVEFSPCGNY-FLAILDNVMKNP 141
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 20/136 (14%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI------------ 164
+ F + + D + D + + + +N P E+I
Sbjct: 231 TYFITSSRDTNSFLVDVSTL---QVLKKYETDCP-LNTAVITPLKEFIILGGGQEAKDVT 286
Query: 165 -LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ + + + + H + V SP T AS G D + +
Sbjct: 287 TTSANEGKFEARFYHKIFEEE-IGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHF 344
Query: 224 SKIGEEQSTEDAEDGP 239
K D E
Sbjct: 345 EK-SYFDFKYDVEKAA 359
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 19/109 (17%), Positives = 32/109 (29%), Gaps = 17/109 (15%)
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
L+ + K H+ + QV+++ +L S D VW
Sbjct: 5 HHHHHHSSGENLYFQGSHM-KAIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVW--- 59
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ +G E L GHT I + + + S D
Sbjct: 60 ---------YSLNG--ERLGTLDGHTGTIWSIDVDCFTKY-CVTGSADY 96
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 7e-18
Identities = 13/153 (8%), Positives = 25/153 (16%), Gaps = 13/153 (8%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
V + I+ K + + + + + L +
Sbjct: 41 YVYKRRTDGIYIINL---GKTWEKLQLAARVIVAIENPQDIIVQ-SARPYGQRAVLKFAQ 96
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
H F Q + + E A P
Sbjct: 97 YTG-AHAIAGRHTPGTFTNQLQT-SFSEPRLLILTDPRTDHQP-------IKESALGNIP 147
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ F + D N
Sbjct: 148 TIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFW 180
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 2e-16
Identities = 8/121 (6%), Positives = 22/121 (18%), Gaps = 10/121 (8%)
Query: 120 GSVADDQKLMIWDTRS----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
N+ + + ++ + G +A
Sbjct: 126 LI--LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLA 183
Query: 176 LWDLRN----LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231
L+ L + + E A+ V + + +
Sbjct: 184 RMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAAPAADTW 243
Query: 232 T 232
Sbjct: 244 G 244
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 8e-16
Identities = 8/160 (5%), Positives = 21/160 (13%), Gaps = 21/160 (13%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
Q+ ++ + + HT
Sbjct: 84 RP--YGQRAVLKFAQY---TGAHAIAGRHTPGTFTNQLQTSFSEP-RLLILTDPRTDHQP 137
Query: 180 RNLKLK------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
+ +N+ + L L
Sbjct: 138 IKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQM-RGTILPG 196
Query: 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D D + ++ +
Sbjct: 197 HKWDVM--------VDLFFYRDPEEAKEQEEEEAALVAPD 228
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-14
Identities = 13/124 (10%), Positives = 19/124 (15%), Gaps = 6/124 (4%)
Query: 120 GSVADDQKLMIWD--TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
G L R + V E A A A+
Sbjct: 176 GC--LFWLLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVA 233
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
+ E D Q P + + +
Sbjct: 234 EYAAPAADTWGGEWGTDAAAQPAAIP-AQAGADWTAAPAPAAGGWD-TAAAPAPGWEQGS 291
Query: 238 GPPE 241
P
Sbjct: 292 APVP 295
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 9/132 (6%), Positives = 27/132 (20%), Gaps = 19/132 (14%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
+ + +T ++ + K + I ++
Sbjct: 19 IQMMLAADVHLGTKNCDFQMER--YVYKRRTDGIYIINLGKT-WEKLQLAARVIVAIENP 75
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262
+ + ++ +R + A+ I G HT +
Sbjct: 76 Q-DIIVQSARPYGQRAVLK------------FAQYT--GAHAIAGRHTPGTFTNQLQTSF 120
Query: 263 PWVICSVSEDNI 274
+
Sbjct: 121 SEPRLL-ILTDP 131
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 2e-17
Identities = 25/156 (16%), Positives = 54/156 (34%), Gaps = 17/156 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+V DD ++ + S T + V + F+P S + T +D+ ++ +D +
Sbjct: 178 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237
Query: 181 NLKLKLHSFESHKDEIFQVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ + L E ++ + ++ + A+ G D + VWD++ +
Sbjct: 238 SGEF-LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT-SKCVQK------ 289
Query: 239 PPELLFIHGGHTAKIS-DFSWNPNEPWVICSVSEDN 273
+ N I S+S D
Sbjct: 290 ----WTLDKQQLGNQQVGVVATGNG--RIISLSLDG 319
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 3e-15
Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 6/111 (5%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
D + S N V H+ +N T D +V + K
Sbjct: 138 RDNFGVFISWDSGN---SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 194
Query: 184 LK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ + V++SP + + + G+DR++ +D GE
Sbjct: 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKY 244
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 5e-15
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY---------ILATGSAD 171
+ K++++D +S V + T+++N +S+ P + ++ATGS D
Sbjct: 505 AGDVMGKILLYDLQSREV--KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562
Query: 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ ++ ++ + + +HKD + + W + L SSG D + W++
Sbjct: 563 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST--LVSSGADACIKRWNV 612
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 24/161 (14%), Positives = 41/161 (25%), Gaps = 25/161 (15%)
Query: 123 ADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSE-YILATGSADKTVALWDLR 180
+ D P H ++ V + F+P L +G V +W
Sbjct: 38 GKSAFVRCLDDGDSK-VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96
Query: 181 NLKLK-------LHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLHVWDLSKIGEEQST 232
K F+ I + W + G D
Sbjct: 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS---------- 146
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ G L GH+ +I+ + P +V +D
Sbjct: 147 --WDSG--NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 183
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 30/162 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
Q + D + A+ + +S +P Y +A G + L+DL+
Sbjct: 465 EGNTIQVFKLSD-----LEVSFDLKTPLRAKPSYISISPSETY-IAAGDVMGKILLYDLQ 518
Query: 181 NLKLKLHSFESHKDEIFQVQWSP---------HNETILASSGTDRRLHVWDLSKIGEEQS 231
+ ++K + +I + W P E ++A+ D + ++ + +
Sbjct: 519 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR------ 572
Query: 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
P +++ H +++ W V S D
Sbjct: 573 -------PMKIIKALNAHKDGVNNLLWETPSTLV--SSGADA 605
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 45/196 (22%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+V D + +WD + + T+D + + + S D T+ ++L
Sbjct: 269 TVGADATIRVWDVTTSKCVQ-KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ ++ L + H I + +P L S D R+ W S + +
Sbjct: 328 HDEV-LKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQ------------ 369
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN--- 297
H+ I + + S+S D T++++ I +
Sbjct: 370 -------DHSNLIVSLDNSKAQ--EYSSISWD--------------DTLKVNGITKHEFG 406
Query: 298 GGISSTASPTASSTAS 313
++ TA
Sbjct: 407 SQPKVASANNDGFTAV 422
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 18/153 (11%), Positives = 40/153 (26%), Gaps = 30/153 (19%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S++ D L + H ++ S N + A + D + +
Sbjct: 388 SISWDDTLKVNGITKH----------EFGSQPKVASANN--DGFTAVLTNDDDLLILQSF 435
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ + + + L T + + DL +
Sbjct: 436 TGDIIKSVRLNSPGSAVSLSQNY-VAVGLEEGNTIQVFKLSDLEVSFD------------ 482
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ AK S S +P+E ++ +
Sbjct: 483 ----LKTPLRAKPSYISISPSETYIA-AGDVMG 510
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 24/118 (20%), Positives = 38/118 (32%), Gaps = 9/118 (7%)
Query: 147 AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQ-VQWSP- 203
LS++P + I V D + K+ + F H + V++SP
Sbjct: 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 75
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261
L S ++ VW + E S E + ISD SW+
Sbjct: 76 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ------VLAGPISDISWDFE 127
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 2e-17
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S D+++ IW T + S + H V ++++P Y LA+ S D T +W
Sbjct: 33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASASFDATTCIWKKN 91
Query: 181 NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ + + E H++E+ V W+P + +LA+ D+ + VW++ E+
Sbjct: 92 QDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEV-----------DEEDE 139
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E + + HT + W+P++ + S S D+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQEL-LASASYDD 172
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 2e-16
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + D+ + +W+ + + +++HT +V + ++P S+ +LA+ S D TV L+
Sbjct: 122 TCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREE 180
Query: 181 NLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ E H+ ++ + + P + LAS DR + +W G EQ + P
Sbjct: 181 EDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239
Query: 240 P--ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + G H+ I D +W + + D+
Sbjct: 240 SWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDD 274
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 4e-15
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 24/180 (13%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V WH + L S + D + ++ + T++ H + V L+F+P + + A+
Sbjct: 156 VVWHP-SQELLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQRL-ASC 212
Query: 169 SADKTVALWDL----RNLKLKLHSFES-----------HKDEIFQVQWSPHNETILASSG 213
S D+TV +W + + H I+ + W + A++
Sbjct: 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGAL-ATAC 271
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D + V+ E+ +++ + +H H+ ++ +WNP EP ++ S S+D
Sbjct: 272 GDDAIRVFQ-----EDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-14
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVD-------------AHTAEVNCLSFNPYSEYILAT 167
S +DD+ + IW + H+ + +++ + + AT
Sbjct: 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGAL-AT 269
Query: 168 GSADKTVALWDLR--------NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219
D + ++ L H ++H ++ V W+P +LAS D +
Sbjct: 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVA 329
Query: 220 VWDLSKIGEEQST 232
W + E
Sbjct: 330 FWKYQR-PEGLHH 341
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 6e-13
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 18/134 (13%)
Query: 143 HTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDL--RNLKLKLHSFESHKDEIFQV 199
V AH + L++NP +LA+ D+ + +W + K E H+ + +V
Sbjct: 9 GRVPAHPDSRCWFLAWNPAGT-LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKV 67
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
WSP LAS+ D +W E + GH ++ +W
Sbjct: 68 AWSP-CGNYLASASFDATTCIW------------KKNQDDFECVTTLEGHENEVKSVAWA 114
Query: 260 PNEPWVICSVSEDN 273
P+ + + S D
Sbjct: 115 PSGNLLA-TCSRDK 127
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 4e-10
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 121 SVADDQKLMIWDTRS------HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174
+ D + ++ S +H AH+ +VNC+++NP +LA+ S D V
Sbjct: 269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Query: 175 ALWDLRNLKLKLHSFESH 192
A W + + LH H
Sbjct: 329 AFWKYQRPEG-LHHHHHH 345
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 81.3 bits (202), Expect = 3e-17
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD+ L IWD S K T+ H+ V C +FNP S I +GS D++V +WD++
Sbjct: 82 SASDDKTLKIWDVSSG---KCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVK 137
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K L + +H D + V ++ + +++ SS D +WD + G+ T
Sbjct: 138 TGKC-LKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTAS-GQCLKT-------- 186
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ +S ++PN + I + + DN
Sbjct: 187 ----LIDDDNPPVSFVKFSPNGKY-ILAATLDN 214
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-15
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
T+ HT V+ + F+P E++ A+ SADK + +W + K + HK I V WS
Sbjct: 17 FTLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWS 74
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262
+ +L S+ D+ L +WD+S G+ T L GH+ + ++NP
Sbjct: 75 S-DSNLLVSASDDKTLKIWDVSS-GKCLKT---------LK----GHSNYVFCCNFNPQS 119
Query: 263 PWVICSVSEDN 273
I S S D
Sbjct: 120 NL-IVSGSFDE 129
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 73.6 bits (182), Expect = 1e-14
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D+ + IWD ++ K T+ AH+ V+ + FN I + S D +WD
Sbjct: 125 GS--FDESVRIWDVKT---GKCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDT 178
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ + + + V++SP N + ++ D L +WD SK G+ T
Sbjct: 179 ASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSK-GKCLKT 229
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 71.3 bits (176), Expect = 6e-14
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 23/157 (14%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
S + D IWDT S + T +D V+ + F+P +YI + D T+ LWD
Sbjct: 166 SSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDY 221
Query: 180 RNLKLKLHSFESHKDEIFQVQW--SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
K L ++ HK+E + + S + S D +++W+L E
Sbjct: 222 SKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQ--- 276
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVI-CSVSEDN 273
GHT + + +P E + ++ D
Sbjct: 277 ----------GHTDVVISTACHPTENIIASAALENDK 303
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 66.7 bits (164), Expect = 2e-12
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN---PYSEYILATGSADKTVALW 177
+ D L +WD K T H E C+ N ++I +GS D V +W
Sbjct: 209 AATLDNTLKLWDYSK---GKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIW 264
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLHVWDL 223
+L+ ++ + + H D + P I A+ D+ + +W
Sbjct: 265 NLQTKEI-VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 8e-07
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 21/108 (19%)
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AT S V L + H + V++SP N LASS D+ + +W
Sbjct: 1 ATQSKPTPVKPNY----AL-KFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIW---- 50
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
A DG + GH ISD +W+ + + S S+D
Sbjct: 51 --------GAYDG--KFEKTISGHKLGISDVAWSSDSNL-LVSASDDK 87
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 16/155 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ ++ +++ N K + T H V C+ + P S I T S D+ +++ R
Sbjct: 28 TTTATNQVELYEQDG-NGWKHARTFSDHDKIVTCVDWAPKSNRI-VTCSQDRNAYVYEKR 85
Query: 181 NLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ V+WSP NE A R + V + E+
Sbjct: 86 PDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYF----------EQEND 134
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + I W+PN ++ + D
Sbjct: 135 WWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCADR 168
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 21/159 (13%), Positives = 56/159 (35%), Gaps = 9/159 (5%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL- 179
+ + D+ +++ R K + + + ++P +E A GS + +++
Sbjct: 72 TCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFE 130
Query: 180 --RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL---SKIGEEQSTED 234
+ + H + I + W P N +LA+ DR+ +V + +++
Sbjct: 131 QENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVW 189
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
P + + ++P+ + D+
Sbjct: 190 GSRLPFNTVCAEYPSGGWVHAVGFSPSGNA-LAYAGHDS 227
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 3e-13
Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 15/127 (11%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNE 206
+FN T +A V L++ K +F H + V W+P +
Sbjct: 10 LPKPSYEHAFNSQRTEF-VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN 68
Query: 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266
I + DR +V++ DG + + + W+PNE
Sbjct: 69 RI-VTCSQDRNAYVYEKR-----------PDGTWKQTLVLLRLNRAATFVRWSPNEDK-F 115
Query: 267 CSVSEDN 273
S
Sbjct: 116 AVGSGAR 122
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 8e-08
Identities = 16/130 (12%), Positives = 45/130 (34%), Gaps = 20/130 (15%)
Query: 121 SVADDQKLMIWDTRSHNV-SKPSHTVDA-------------HTAEVNCLSFNPYSEYILA 166
+ D+K + +V +KP +V V+ + F+P + A
Sbjct: 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-A 221
Query: 167 TGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
D +V + + L + + + + + W+ + + ++G + +
Sbjct: 222 YAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV--AAGYNYSPILLQG 279
Query: 224 SKIGEEQSTE 233
++ G + +
Sbjct: 280 NESGWAHTRD 289
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 20/167 (11%), Positives = 41/167 (24%), Gaps = 7/167 (4%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
V + +L D + I + + TV + L + S I+A
Sbjct: 210 AVGFSPSGNAL-AYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVA 267
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
G + L + ++ + H + + L
Sbjct: 268 AGYNYSPILLQGNESGWAHTRDLDAGTSKT----SFTHTGNTGEGREEEGPVSFTALRST 323
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + L +H A + ++ P S D
Sbjct: 324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDG 370
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 80.6 bits (200), Expect = 4e-17
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 21/153 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S A D + I+D + K HT++ H + L+F+P S+ + T S D + ++D++
Sbjct: 181 SGAIDGIINIFDIATG---KLLHTLEGHAMPIRSLTFSPDSQLL-VTASDDGYIKIYDVQ 236
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ L + H + V + P + SS +D+ + VW D
Sbjct: 237 HANL-AGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVW------------DVGTR-- 280
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ H ++ +N N ++ SV +D
Sbjct: 281 TCVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQ 312
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 79.0 bits (196), Expect = 2e-16
Identities = 26/104 (25%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ +DD + I+D + + + T+ H + V ++F P + + S+DK+V +WD+
Sbjct: 223 TASDDGYIKIYDVQH---ANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVG 278
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+H+F H+D+++ V+++ N + + S G D+ +H++D
Sbjct: 279 TRTC-VHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDCP 320
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 5e-16
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ K+ I+ S K +++D + ++++P +Y+ A+G+ D + ++D+
Sbjct: 139 TGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSPDGKYL-ASGAIDGIINIFDIA 194
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
KL LH+ E H I + +SP + +L ++ D + ++D+ T
Sbjct: 195 TGKL-LHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQH-ANLAGT 243
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 6e-16
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 21/153 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD + K ++DA + L+F+P S+Y+ ATG+ V ++ +
Sbjct: 97 SSSLDAHIRLWDLENG---KQIKSIDAGPVDAWTLAFSPDSQYL-ATGTHVGKVNIFGVE 152
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ K +S ++ I + +SP + LAS D ++++D++ G+ T +
Sbjct: 153 SGKK-EYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIAT-GKLLHTLE------ 203
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH I +++P+ + + S+D
Sbjct: 204 -------GHAMPIRSLTFSPDSQL-LVTASDDG 228
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 77.1 bits (191), Expect = 8e-16
Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 24/164 (14%)
Query: 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY---ILATGSA 170
+H S + + + AH + +++ + + TGS
Sbjct: 1 MHHHHHHS-SRENLYFQGTNQY---GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSL 56
Query: 171 DKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
D V +W R+ +L L S E H+ + V S I ASS D + +WDL G++
Sbjct: 57 DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWDLEN-GKQ 114
Query: 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ D +++P+ + + + +
Sbjct: 115 IKSID-------------AGPVDAWTLAFSPDSQY-LATGTHVG 144
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 5e-17
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
SV D +L +W+T + +T AH + VN LS +P +YI ATG DK + +WD+
Sbjct: 189 SVGWDGRLKVWNTNF----QIRYTFKAHESNVNHLSISPNGKYI-ATGGKDKKLLIWDIL 243
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
NL I Q+ ++P +A GTD+ + +++L + E P
Sbjct: 244 NLTY-PQREFDAGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLMT-QSKAPVCTIEAEPI 299
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
G + + +WN + + D
Sbjct: 300 TKAEGQKGKNPQCTSLAWNALGKKLF-AGFTDG 331
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 4e-13
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
S D+ L +WD R+ H +EV ++F+P + I + A++ + LW++
Sbjct: 94 SS--WDKTLRLWDLRTG---TTYKRFVGHQSEVYSVAFSPDNRQI-LSAGAEREIKLWNI 147
Query: 180 RN-LKLKLHSFESHKDEIFQVQWSP---------HNETILASSGTDRRLHVWDLS 224
K E+H D + V++SP AS G D RL VW+ +
Sbjct: 148 LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 18/116 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL- 179
+ D+KL+IWD + + +N ++FNP +A G+ D+ V +++L
Sbjct: 230 TGGKDKKLLIWDILN---LTYPQREFDAGSTINQIAFNP-KLQWVAVGT-DQGVKIFNLM 284
Query: 180 -----------RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
K + + + W+ L + TD + +
Sbjct: 285 TQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFE 339
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 27/163 (16%), Positives = 66/163 (40%), Gaps = 28/163 (17%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP---------YSEYILATGSAD 171
S ++++ +W+ S + H+ V+C+ ++P A+ D
Sbjct: 135 SAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD 193
Query: 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231
+ +W+ N ++ ++F++H+ + + SP N +A+ G D++L +WD+
Sbjct: 194 GRLKVWNT-NFQI-RYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDILN-LTYPQ 249
Query: 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
E + I+ ++NP W + ++ +
Sbjct: 250 REF-------------DAGSTINQIAFNPKLQW-VAVGTDQGV 278
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 5e-11
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 20/120 (16%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-----ILATGSADKTVALWD 178
D+ L I + ++ H+ V + + +L +GS DKTV +W
Sbjct: 3 DNSSLDIQVVKRG-------ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWK 55
Query: 179 LRNLKLK------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
L + + H + + S SS D+ L +WDL G
Sbjct: 56 LYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRT-GTTYKR 113
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 20/111 (18%)
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQV------QWSPHNETILASSGTDRRLHVWD 222
+ + ++ + +K E H D + + + + + +L S D+ + +W
Sbjct: 2 ADNSSLDIQV-----VKRGILEGHSDWVTSIVAGFSQKENE-DSPVLISGSRDKTVMIWK 55
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L E+ GH +SD + + + S S D
Sbjct: 56 L-------YEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-AISSSWDK 98
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-16
Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 22/154 (14%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G + + W R + + H + V + F+P + + S D T+ +WD
Sbjct: 83 GPLGQKRDPKEWIPRP----PEKYALSGHRSPVTRVIFHPVFSVM-VSASEDATIKVWDY 137
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ + H D + + + +LAS D + +WD E T
Sbjct: 138 ETGDF-ERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQG-FECIRT------- 187
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ GH +S S PN I S S D
Sbjct: 188 --MH----GHDHNVSSVSIMPNGDH-IVSASRDK 214
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-15
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD + T+ H V + F+ ++I + + DKT+ +WD +
Sbjct: 313 SGSRDKTIKMWDVST---GMCLMTLVGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYK 368
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
N + + + +H+ + + + + + D+ + VW+
Sbjct: 369 NKRC-MKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWEC 409
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 4e-15
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 21/153 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S ++D + +WD + T+ HT V +SF+ + + A+ SAD T+ LWD +
Sbjct: 125 SASEDATIKVWDYET---GDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ + + H + V P N + S+ D+ + +W++ G T
Sbjct: 181 GFEC-IRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQT-GYCVKT-------- 229
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
F GH + N + I S S D
Sbjct: 230 ---FT--GHREWVRMVRPNQDGTL-IASCSNDQ 256
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 6e-15
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 39/169 (23%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI------------------- 164
+DQ + +W + + + H V C+S+ P S Y
Sbjct: 254 NDQTVRVWVVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
L +GS DKT+ +WD+ L + H + + V + + S D+ L VWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY- 367
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
K T + H ++ ++ P+V+ + S D
Sbjct: 368 KNKRCMKTLN-------------AHEHFVTSLDFHKTAPYVV-TGSVDQ 402
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 4e-13
Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 39/172 (22%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +W+ ++ T H V + N I A+ S D+TV +W +
Sbjct: 209 SASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVRPNQDGTLI-ASCSNDQTVRVWVVA 264
Query: 181 NLKLKLHSFESHKDEIFQVQWSP-------------------HNETILASSGTDRRLHVW 221
+ H+ + + W+P L S D+ + +W
Sbjct: 265 TKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D G L GH + ++ +++ S ++D
Sbjct: 324 ------------DVSTG--MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 9e-10
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S ADD+ L +WD ++ + T++AH V L F+ + Y+ TGS D+TV +W+ R
Sbjct: 355 SCADDKTLRVWDYKNK---RCMKTLNAHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWECR 410
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 18/109 (16%)
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ W R + ++ H+ + +V + P +++ S+ D + VW
Sbjct: 82 GGPLGQKRDPKEWIPRP--PEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVW--- 135
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D E G + GHT + D S++ + + S S D
Sbjct: 136 ---------DYETG--DFERTLKGHTDSVQDISFDHSGKL-LASCSADM 172
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 3e-16
Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 32/174 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP----------------YSEYI 164
+ D + + + +AHT N +S+ P
Sbjct: 122 CGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR 181
Query: 165 LATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNE---TILASSGTDRRLH 219
A+G D + LW + E+H D + V W+P + +AS D R+
Sbjct: 182 FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241
Query: 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+W +DA +H + SW+ ++ DN
Sbjct: 242 IWTC---------DDASSNTWSPKLLH-KFNDVVWHVSWSITAN-ILAVSGGDN 284
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 4e-16
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE-YILATGSADKTVALWDLRNL 182
D+ + I+D R+ + H V +++ ILA+ S D+ V +W N
Sbjct: 33 SDRSVKIFDVRN-GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91
Query: 183 K-LKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K H H + V W+PH+ ILA +D + + +G
Sbjct: 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY-----------TGEGQW 140
Query: 241 ELLFIHGGHTAKISDFSWNPN 261
E+ I+ HT + SW P
Sbjct: 141 EVKKINNAHTIGCNAVSWAPA 161
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 6e-16
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNE 206
H ++ + Y LAT S+D++V ++D+RN L H+ ++QV W+
Sbjct: 12 HEDMIHDAQMDYYGTR-LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMY 70
Query: 207 -TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-W 264
ILAS DR++ +W E+G E H GH + ++ W P++
Sbjct: 71 GNILASCSYDRKVIIW------------REENGTWEKSHEHAGHDSSVNSVCWAPHDYGL 118
Query: 265 VICSVSEDN 273
++ S D
Sbjct: 119 ILACGSSDG 127
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP---YSEYILATGSADKTVALW 177
S D + +W K ++AH+ V +++ P +A+ S D V +W
Sbjct: 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243
Query: 178 DL---RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
+ D ++ V WS ILA SG D ++ +W S G+
Sbjct: 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKESVDGQWV 298
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 6/100 (6%)
Query: 108 DVAWH---LLHESLFGSVADDQKLMIWDTRSHNVSKP-SHTVDAHTAEVNCLSFNPYSEY 163
DVAW L S S + D ++ IW + + + V +S++ +
Sbjct: 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI-TAN 275
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
ILA D V LW ++ + V S
Sbjct: 276 ILAVSGGDNKVTLWKE-SVDGQWVCISDVNKGQGSVSASV 314
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 3e-16
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S A D +WD R T H +++N + F P ATGS D T L+DLR
Sbjct: 201 SGACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNGNAF-ATGSDDATCRLFDLR 256
Query: 181 NLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ L +S ++ I V +S + +L + D +VWD K +
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALK-ADRAGV------- 307
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L GH ++S + + + S D+
Sbjct: 308 ---LA---GHDNRVSCLGVTDDGMA-VATGSWDS 334
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 2e-15
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
S D +WD + + + T HT +V LS P + +G+ D + LWD+
Sbjct: 160 SS--GDTTCALWDIET---GQQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDV 213
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
R +F H+ +I + + P N A+ D ++DL + +E T
Sbjct: 214 REGMC-RQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDL-RADQELMT 263
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 5e-15
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 24/156 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D KL+IWD+ + + H + ++ V ++ P Y+ A G D ++++L+
Sbjct: 72 SASQDGKLIIWDSYT---TNKVHAIPLRSSWVMTCAYAPSGNYV-ACGGLDNICSIYNLK 127
Query: 181 ---NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
H + ++ + I+ SSG D +WD+ G++ +T
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSG-DTTCALWDIET-GQQTTT----- 179
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
F GHT + S P+ + S + D
Sbjct: 180 ------FT--GHTGDVMSLSLAPDTRLFV-SGACDA 206
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 6e-15
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 124 DDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182
D I++ ++ + S + HT ++C F ++ + T S D T ALWD+
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETG 174
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ +F H ++ + +P + + S D +WD+ + G + T
Sbjct: 175 QQ-TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDV-REGMCRQT 221
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 3e-13
Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Query: 121 SVADDQKLMIWDTRSHNVS----KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
D L V + T+ H A++ + + S + + S D + +
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLL-LSASQDGKLII 81
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
WD K+H+ + ++P + +A G D +++L
Sbjct: 82 WDSYTTN-KVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLK 127
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 3e-13
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 117 SLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
+ F + +DD ++D R+ + SH D + +SF+ + G D
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTYSH--DNIICGITSVSFSKSGRLL-LAGYDDFNCN 295
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WD H + + + + + +A+ D L +W+
Sbjct: 296 VWDALKADR-AGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 3e-16
Identities = 20/161 (12%), Positives = 56/161 (34%), Gaps = 19/161 (11%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKP--SHTVDAHTAEVNCLSFNP---YSEYILATGSADK 172
+F +V ++ +++ S + S+ ++ S +LA +
Sbjct: 37 VFATV-GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95
Query: 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ + + ++ + + H + I ++++ P + +L S D L +W++ +
Sbjct: 96 IIRIINPITMQC-IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-DTLVAI 153
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH ++ ++ I S D+
Sbjct: 154 ----------FGGVEGHRDEVLSADYDLLGEK-IMSCGMDH 183
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 9/138 (6%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN-- 181
+ I + + + H +N L F+P +L + S D + LW+++
Sbjct: 93 SRGIIRIINPITM---QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST-EDAEDGPP 240
L E H+DE+ + + S G D L +W ++ + +++ D P
Sbjct: 150 LVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNP 207
Query: 241 ELLFI-HGGHTAKISDFS 257
DFS
Sbjct: 208 NKTNRPFISQKIHFPDFS 225
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-14
Identities = 20/136 (14%), Positives = 53/136 (38%), Gaps = 24/136 (17%)
Query: 148 HTAEVNCLSFNPYS---EYILATGSADKTVALWDLRN----LKLKLHSFESHKDEIFQVQ 200
H + + FN +S + ++ V L++ + L+ + + +
Sbjct: 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCA 76
Query: 201 WSP---HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257
W+ + +LA +G+ + + + + ++ GH I++
Sbjct: 77 WTYDSNTSHPLLAVAGSRGIIRIINPIT-MQCIKH-----------YV--GHGNAINELK 122
Query: 258 WNPNEPWVICSVSEDN 273
++P +P ++ SVS+D+
Sbjct: 123 FHPRDPNLLLSVSKDH 138
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 32/194 (16%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
++ +H +L SV+ D L +W+ ++ + V+ H EV ++ E I +
Sbjct: 120 ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKI-MS 178
Query: 168 GSADKTVALWDLRNLKLK---------------------------LHSFESHKDEIFQVQ 200
D ++ LW + + ++ + + H++ + V+
Sbjct: 179 CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
W ++ S + + W K+ ++ + +L I ++
Sbjct: 239 WLG---DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM 295
Query: 261 NEP-WVICSVSEDN 273
+ ++ ++
Sbjct: 296 DFWQKMLALGNQVG 309
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-12
Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 39/169 (23%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
QK+ D T D H V+C+ + ++ + S + + W
Sbjct: 212 RPFISQKIHFPDF---------STRDIHRNYVDCVRWLGD---LILSKSCENAIVCWKPG 259
Query: 181 NLKLK-------------LHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKI 226
++ L F+ + +I+ +++S +LA +L+VWDL
Sbjct: 260 KMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL--- 316
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFS--WNPNEPWVICSVSEDN 273
+ ED H + ++ + +I +V +D
Sbjct: 317 -------EVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI-AVCDDA 357
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 28/135 (20%)
Query: 115 HESLFGSVA----------DDQKLMIWDTRSHNVSKPS-----------HTVDAHTAEVN 153
H + V + ++ W D ++
Sbjct: 230 HRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIW 289
Query: 154 CLSFNPYSEY-ILATGSADKTVALWDLRN---LKLKLHSFESHK--DEIFQVQWSPHNET 207
+ F+ +LA G+ + +WDL K K + HK I Q +S + +
Sbjct: 290 YMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSS 348
Query: 208 ILASSGTDRRLHVWD 222
IL + D + WD
Sbjct: 349 ILIAVCDDASIWRWD 363
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 3e-16
Identities = 23/164 (14%), Positives = 56/164 (34%), Gaps = 19/164 (11%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + + D+ + AH +E+ L F P E + + S D + +W ++
Sbjct: 114 LGTTEGDIKVLDSNFN---LQREIDQAHVSEITKLKFFPSGEAL-ISSSQDMQLKIWSVK 169
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP- 239
+ + H+ + + + S+ D + +W+ G T + ++ P
Sbjct: 170 DGSN-PRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGT-GTTIHTFNRKENPH 226
Query: 240 ----------PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+H T+K ++ + +VI +
Sbjct: 227 DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSG 269
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 9e-15
Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + + + S + T N L+ + + + G + +A WDLR
Sbjct: 264 AGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321
Query: 181 NLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ + + + I V ++ + SSG D + + +S E + + P
Sbjct: 322 SPECPVGEFLINEGTPINNVYFAA--GALFVSSGFDTSIKLDIISD-PESERPAIEFETP 378
Query: 240 PELLFIHGGHTAKISDFSWNPNEPW---VICSVSEDNI 274
L+ + +S F + ++ V+ +
Sbjct: 379 TFLV----SNDDAVSQFCYVSDDESNGEVLEVGKNNFC 412
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-14
Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 22/153 (14%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
D +++T + + + G+ + + + D
Sbjct: 73 KARLDGHDFLFNTIIRD----GSKMLKRADYTAVDTAKLQMRRF-ILGTTEGDIKVLDSN 127
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
++H EI ++++ P E + SS D +L +W +DG
Sbjct: 128 FNLQ-REIDQAHVSEITKLKFFPSGEAL-ISSSQDMQLKIW------------SVKDG-- 171
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH A ++D + + S S D
Sbjct: 172 SNPRTLIGHRATVTDIAIIDRGRN-VLSASLDG 203
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
+ T++ N L F Y +Y+ G + + ++ + + + +
Sbjct: 241 QLHEISTSKKNNLEFGTYGKYV-IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVD 299
Query: 203 PHNETILASSGTDRRLHVWDLS 224
+N + + + L WDL
Sbjct: 300 GNNANYIYAGYENGMLAQWDLR 321
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ ++ L WD RS + +N + F + + + D ++ L +
Sbjct: 308 AGYENGMLAQWDLRSPE-CPVGEFLINEGTPINNVYFAAGA--LFVSSGFDTSIKLDIIS 364
Query: 181 NLK----LKLHS----FESHKDEIFQVQWSPHNETI--LASSGTDRRLHVWDLS 224
+ + S+ D + Q + +E+ + G + +++LS
Sbjct: 365 DPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 16/159 (10%), Positives = 42/159 (26%), Gaps = 25/159 (15%)
Query: 121 SVADDQKLMIWDTRS---HNVSKPSHTVDAHTAEVNCL---SFNPYSEYILATGSADKTV 174
D+ + + + + V ++ V+ +F ++ D
Sbjct: 22 EENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHL-YKARLDGHD 80
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
L++ D T+ + V D + ++ +
Sbjct: 81 FLFNTIIRDGS--KMLKRADYTAVDTAKLQMRRF-ILGTTEGDIKVLDSNF-NLQREIDQ 136
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
H ++I+ + P+ + S S+D
Sbjct: 137 -------------AHVSEITKLKFFPSGEA-LISSSQDM 161
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 6e-16
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S D+K M+WD RS + + H ++VN + + P + A+GS D T L+DLR
Sbjct: 215 SGGCDKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSGDAF-ASGSDDATCRLYDLR 270
Query: 181 NLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ + ++S ES V +S + +L + D ++VWD+ K G S
Sbjct: 271 ADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLK-GSRVSI------- 321
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
LF GH ++S +P+ CS S D+
Sbjct: 322 ---LF---GHENRVSTLRVSPDGTA-FCSGSWDH 348
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 2e-15
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 120 GSVADDQKLMIWDTRSH---NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
G D K ++ N++ +V HT ++ SF I T S D T AL
Sbjct: 124 GG--LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQI-LTASGDGTCAL 180
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDL 223
WD+ + +L L SF H ++ + +P S G D++ VWD+
Sbjct: 181 WDVESGQL-LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 7e-15
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 25/159 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D K+++WD+ + + H V V ++ P I A G D +++ L
Sbjct: 81 SSSQDGKVIVWDSFT---TNKEHAVTMPCTWVMACAYAPSGCAI-ACGGLDNKCSVYPLT 136
Query: 181 NLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
K + S H + + ++ ++ + ++ D +WD+ G+ +
Sbjct: 137 FDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVES-GQLLQS--- 191
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDN 273
F GH A + P+E S D
Sbjct: 192 --------FH--GHGADVLCLDLAPSETGNTFVSGGCDK 220
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 3e-14
Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 23/161 (14%)
Query: 124 DDQKLMIWDTRSHNVS-----------KPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172
++++ + D H V+ K T+ H +V C+ + I + S D
Sbjct: 28 EEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRI-VSSSQDG 86
Query: 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
V +WD K H+ + ++P + +A G D + V+ L+ E
Sbjct: 87 KVIVWDSFTTN-KEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLTFDKNENMA 144
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
HT +S S+ ++ ++ + S D
Sbjct: 145 --------AKKKSVAMHTNYLSACSFTNSDMQIL-TASGDG 176
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 2e-11
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 117 SLFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
F S +DD ++D R+ V+ S ++ + + F+ S +L G D T+
Sbjct: 253 DAFASGSDDATCRLYDLRADREVAIYSK--ESIIFGASSVDFSL-SGRLLFAGYNDYTIN 309
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+WD+ + H++ + ++ SP + T S D L VW
Sbjct: 310 VWDVLKGSR-VSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 353
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 15/93 (16%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR-------------NLKLKLHSFE 190
D S +E L ++ L D+ + + +
Sbjct: 3 ATDGLHENETLASLKSEAES-LKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLK 61
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
H +++ + W ++ + SS D ++ VWD
Sbjct: 62 GHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDS 93
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 6e-16
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 24/153 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S A D + +WD + HT+ HT V L F+ ++ +GS D ++ +WD+
Sbjct: 254 SGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVE 307
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+H+ H+ ++ IL S D + +WD+ K G+ T
Sbjct: 308 TGNC-IHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDI-KTGQCLQT-------- 354
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L H + ++ +N N + + S+D
Sbjct: 355 --LQGPNKHQSAVTCLQFNKNF---VITSSDDG 382
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 21/155 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD + HT+ H + + + IL +G+AD TV +WD++
Sbjct: 294 SGSLDTSIRVWDVET---GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIK 347
Query: 181 NLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ L H+ + +Q++ + +S D + +WDL K GE +
Sbjct: 348 TGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDL-KTGEFIRNLVTLE- 402
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GG + + + V S +
Sbjct: 403 -------SGGSGGVVWRIRASNTKL-VCAVGSRNG 429
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W + K T+ HT V I+ +GS D+T+ +W+
Sbjct: 134 SGSDDNTLKVWSAVT---GKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAE 187
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ +H+ H + + + S D L VWD+ G+
Sbjct: 188 TGEC-IHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIET-GQCLHV 234
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 36/194 (18%), Positives = 58/194 (29%), Gaps = 30/194 (15%)
Query: 84 ILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG----SVADDQKLMIWDTRSHNVS 139
+ ++L+ E + PL + + + W
Sbjct: 52 LAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGEL--- 108
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
K + H V I +GS D T+ +W K L + H ++
Sbjct: 109 KSPKVLKGHDDHVIT-CLQFCGNRI-VSGSDDNTLKVWSAVTGKC-LRTLVGHTGGVWSS 165
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
Q + I+ S TDR L VW+ GE T L GHT+ + +
Sbjct: 166 QMRDN---IIISGSTDRTLKVWNAET-GECIHT---------L----YGHTSTVRCMHLH 208
Query: 260 PNEPWVICSVSEDN 273
+ S S D
Sbjct: 209 EK---RVVSGSRDA 219
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 6e-13
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D+ L +W+ + + HT+ HT+ V C+ + + +GS D T+ +WD+
Sbjct: 175 GS--TDRTLKVWNAET---GECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDI 226
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ LH H + VQ+ + + S D + VWD
Sbjct: 227 ETGQC-LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPE 267
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 115 HESLFGSVA----------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
H+SL + D + IWD ++ + + H + V CL FN
Sbjct: 318 HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 374
Query: 165 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDR---- 216
+ T S D TV LWDL+ + L +++++ S + + A +
Sbjct: 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEET 433
Query: 217 RLHVWDL 223
+L V D
Sbjct: 434 KLLVLDF 440
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 30/171 (17%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY------------ILATG 168
+ D K+ + + + N + +DAH VN S+ P + TG
Sbjct: 118 VASSDGKVSVVEFKE-NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176
Query: 169 SADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSPHNE--TILASSGTDRRLHVWDL 223
AD V +W + + + E H D + V WSP + +AS DR +W
Sbjct: 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236
Query: 224 SKIGEEQSTEDAEDGPPE-LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D E GP + L + SW+ + V+ DN
Sbjct: 237 ----------DNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDN 276
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-15
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQW 201
+AH ++ + Y + +AT S+DKT+ ++++ KL + H+ +++V W
Sbjct: 3 VIANAHNEMIHDAVMDYYGKR-MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW 61
Query: 202 SPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+ TILAS D ++ +W E+G + +H H+A ++ W P
Sbjct: 62 AHPKFGTILASCSYDGKVMIW------------KEENGRWSQIAVHAVHSASVNSVQWAP 109
Query: 261 NEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASESPTP 318
+E ++ S D + + T + +D+ G++S + +P E
Sbjct: 110 HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGT 167
Query: 319 TNS 321
S
Sbjct: 168 KES 170
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 5e-15
Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 18/144 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--NPYSEYILATGSADKTVALWDLRN 181
D+ + I++ K T+ H V + + + ILA+ S D V +W N
Sbjct: 29 SDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEEN 86
Query: 182 LKL-KLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ ++ H + VQW+PH +L + +D ++ V + ++
Sbjct: 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVV------------EFKENG 134
Query: 240 PELLFIHGGHTAKISDFSWNPNEP 263
I H ++ SW P
Sbjct: 135 TTSPIIIDAHAIGVNSASWAPATI 158
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 121 SVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALW 177
+ D + IW S + T++ H+ V ++++P +A+ S D+T +W
Sbjct: 175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234
Query: 178 DLRN----LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
N K L E D +++ WS + +LA SG D ++ +W + G+ +
Sbjct: 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEGKWEPA 292
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 108 DVAWH--LLHESLFGSVADDQKLMIW--DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
DVAW +L S SV+ D+ +IW D K + + S++
Sbjct: 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN- 267
Query: 164 ILATGSADKTVALWD 178
+LA D V LW
Sbjct: 268 VLALSGGDNKVTLWK 282
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 4/112 (3%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +W + + + + + A D V ++DL+
Sbjct: 305 SCSMDGSVRLWSLKQ---NTLLALSIVDGVPIFAGRISQDGQKY-AVAFMDGQVNVYDLK 360
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
L K S ++D I P + +S D + +
Sbjct: 361 KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA 412
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-14
Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 10/125 (8%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV W + F + ++ P+ + H ++ L FN ++ + +
Sbjct: 211 DVEWV--DDDKFVIPGPKGAIFVYQITEK---TPTGKLIGHHGPISVLEFNDTNKLL-LS 264
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T+ +W N + F H I W ++ + S D + +W L +
Sbjct: 265 ASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDDK--VISCSMDGSVRLWSLKQ-N 320
Query: 228 EEQST 232
+
Sbjct: 321 TLLAL 325
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 14/125 (11%), Positives = 38/125 (30%), Gaps = 20/125 (16%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G ++ +L +W+ + ++ H A + + +N +I + + LW++
Sbjct: 126 GV--ENGELRLWNKTG----ALLNVLNFHRAPIVSVKWNKDGTHI-ISMDVENVTILWNV 178
Query: 180 RN--LKLKLHSFESHKDEIFQVQWSPHNETI----------LASSGTDRRLHVWDLSKIG 227
+ + E+ I S G + V+ +++
Sbjct: 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE-K 237
Query: 228 EEQST 232
Sbjct: 238 TPTGK 242
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 28/176 (15%), Positives = 50/176 (28%), Gaps = 38/176 (21%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
D + D V K + + ++NP E ILA G + L
Sbjct: 15 ERETQEDDTNSIDSSDDLDGFV-KILKEI-VKLDNIVSSTWNPLDESILAYGEKNSVARL 72
Query: 177 WD-------------------LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217
LR+ S +++ + WS + + + +
Sbjct: 73 ARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-DGNSIVTGVENGE 131
Query: 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L +W+ + G + H A I WN + I S+ +N
Sbjct: 132 LRLWNKT--GALLNV-------------LNFHRAPIVSVKWNKDGTH-IISMDVEN 171
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 14/153 (9%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ A+D+ + IWD + K + H ++ L + P + + +GS D+TV +WDLR
Sbjct: 140 TGAEDRLIRIWDIEN---RKIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLR 195
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ + D + V SP + +A+ DR + VWD G D+E+
Sbjct: 196 TGQC-SLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESG 252
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + + + V+ S S D
Sbjct: 253 T------GHKDSVYSVVFTRDGQSVV-SGSLDR 278
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 4e-14
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD- 178
GS D+ + IWD R+ + S T+ V ++ +P +A GS D+ V +WD
Sbjct: 183 GS--GDRTVRIWDLRTG---QCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDS 236
Query: 179 -----LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
+ L + S HKD ++ V ++ + + S DR + +W+L + ++
Sbjct: 237 ETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSK 295
Query: 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
G E+ +I GH + + N+ +++ S S+D
Sbjct: 296 TPNSGTCEVTYI--GHKDFVLSVATTQNDEYIL-SGSKDR 332
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-13
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPS---------HTVDAHTAEVNCLSFNPYSEYILATGSAD 171
S + D+ + +W+ ++ N S T H V ++ EYI +GS D
Sbjct: 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKD 331
Query: 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH-----NETILASSGTDRRLHVWDLS 224
+ V WD ++ L + H++ + V + + A+ D + +W
Sbjct: 332 RGVLFWDKKSGNP-LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 4e-13
Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 16/146 (10%)
Query: 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK------LHSFESH 192
P + H+ + + S+ + +T + L N L LH H
Sbjct: 5 LVPYNQRANHSKPIPPFLLDLDSQSV-PDALKKQTNDYYILYNPALPREIDVELHKSLDH 63
Query: 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST-----EDAEDGPPELLFIHG 247
+ V++S + LA +G ++ V+ +S G + +D
Sbjct: 64 TSVVCCVKFSN-DGEYLA-TGCNKTTQVYRVSD-GSLVARLSDDSAANKDPENLNTSSSP 120
Query: 248 GHTAKISDFSWNPNEPWVICSVSEDN 273
I ++P+ + + + +ED
Sbjct: 121 SSDLYIRSVCFSPDGKF-LATGAEDR 145
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 7e-13
Identities = 25/129 (19%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 125 DQKLMIWDTRS---------HNVSKPS------HTVDAHTAEVNCLSFNPYSEYILATGS 169
++ ++ + + + + + + F+P +++ ATG+
Sbjct: 84 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL-ATGA 142
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
D+ + +WD+ N K+ + + H+ +I+ + + P + L S DR + +WDL G+
Sbjct: 143 EDRLIRIWDIENRKI-VMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT-GQC 199
Query: 230 QSTEDAEDG 238
T EDG
Sbjct: 200 SLTLSIEDG 208
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 4e-10
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 25/133 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPS----HTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
Q + + + + H HT+ V C+ F+ EY+ ATG +KT +
Sbjct: 32 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL-ATGC-NKTTQV 89
Query: 177 WDLRN----LKLKLHS-------------FESHKDEIFQVQWSPHNETILASSGTDRRLH 219
+ + + +L S S I V +SP + LA+ DR +
Sbjct: 90 YRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLATGAEDRLIR 148
Query: 220 VWDLSKIGEEQST 232
+WD+ +
Sbjct: 149 IWDIEN-RKIVMI 160
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-----ILATGSADKTV 174
GS D+ ++ WD +S P + H V ++ S + ATGS D
Sbjct: 328 GS--KDRGVLFWDKKS---GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 382
Query: 175 ALWDLRNLK 183
+W + +
Sbjct: 383 RIWKYKKIA 391
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 121 SVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
+ + D+K+ + + + + AH + +++ P++ LA GS D TV++W
Sbjct: 29 TGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSL-LAAGSFDSTVSIWAK 87
Query: 180 RNLKLK------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
+ L E H++E+ V WS + LA+ D+ + +W+ + GEE
Sbjct: 88 EESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEE---- 142
Query: 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E + + H+ + W+P+E ++ S S D+
Sbjct: 143 ------YECISVLQEHSQDVKHVIWHPSEA-LLASSSYDD 175
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 9e-15
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 23/174 (13%)
Query: 115 HESLFGSVA------------DDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYS 161
HE+ VA D+ + IW+T + + H+ +V + ++P
Sbjct: 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165
Query: 162 EYILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETI-LASSGTDRRLH 219
+LA+ S D TV +W + + + H+ ++ + L S D +
Sbjct: 166 A-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224
Query: 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
VW +E ++ + H ++ + +W N +I SV D
Sbjct: 225 VWKYMG-DDEDDQQEWV----CEAILPDVHKRQVYNVAWGFNG--LIASVGADG 271
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 4e-14
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 15/134 (11%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQV 199
++ + ++ F+ ILATGS D+ + L ++ + +HK I V
Sbjct: 8 KSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSV 64
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
W PH ++LA+ D + +W +LL I GH ++ +W+
Sbjct: 65 AWRPHT-SLLAAGSFDSTVSIWAK-------EESADRTFEMDLLAIIEGHENEVKGVAWS 116
Query: 260 PNEPWVICSVSEDN 273
+ + + + S D
Sbjct: 117 NDGYY-LATCSRDK 129
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSH------TVDAHTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +W + D H +V +++ ++A+ AD +
Sbjct: 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVL 273
Query: 175 ALWDLRNLKLK---LHSFESHKDEIFQVQW-SPHNETILASSGTDRRLHVWDL 223
A+++ + + K + EI V+W + +TILA+ G D ++ W L
Sbjct: 274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLS-FNPYSEYIL 165
+VAW L SV D L +++ + E+N + + IL
Sbjct: 255 NVAWG--FNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312
Query: 166 ATGSADKTVALWDL 179
ATG D V W L
Sbjct: 313 ATGGDDGIVNFWSL 326
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245
+ S + +K++I+ +S ILA+ TDR++ + + D L
Sbjct: 7 IKSLKLYKEKIWSFDFSQ---GILATGSTDRKIKLVSVKY--------DDFTLIDVLDE- 54
Query: 246 HGGHTAKISDFSWNPNEPWVICSVSEDN 273
H I +W P+ + + S D+
Sbjct: 55 -TAHKKAIRSVAWRPHTSL-LAAGSFDS 80
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQW 201
+AH ++ + Y + LAT S+DKT+ ++++ KL + H+ +++V W
Sbjct: 5 VIANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW 63
Query: 202 SPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+ TILAS D ++ +W E+G + +H H+A ++ W P
Sbjct: 64 AHPKFGTILASCSYDGKVLIW------------KEENGRWSQIAVHAVHSASVNSVQWAP 111
Query: 261 NEP-WVICSVSEDN 273
+E ++ S D
Sbjct: 112 HEYGPLLLVASSDG 125
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 5e-15
Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 28/170 (16%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY------------ILATG 168
+ D K+ + + + N + +DAH VN S+ P + TG
Sbjct: 120 VASSDGKVSVVEFKE-NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178
Query: 169 SADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNE--TILASSGTDRRLHVWDL 223
AD V +W + + E H D + V WSP + LAS DR +W
Sbjct: 179 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238
Query: 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
++ + + L + SW+ + + DN
Sbjct: 239 ---------DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA-LSGGDN 278
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 6e-15
Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 18/144 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWDLRN 181
D+ + I++ K T+ H V + + ++ ILA+ S D V +W N
Sbjct: 31 SDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIWKEEN 88
Query: 182 LKL-KLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ ++ H + VQW+PH +L + +D ++ V + ++
Sbjct: 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV------------EFKENG 136
Query: 240 PELLFIHGGHTAKISDFSWNPNEP 263
I H ++ SW P
Sbjct: 137 TTSPIIIDAHAIGVNSASWAPATI 160
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 7e-14
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 124 DDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSE--YILATGSADKTVALWDLR 180
D + IW S + T++ H+ V ++++P LA+ S D+T +W
Sbjct: 180 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239
Query: 181 N----LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
N K L E D +++ WS + +LA SG D ++ +W + G+ + +
Sbjct: 240 NEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 298
Query: 237 DGP 239
G
Sbjct: 299 QGG 301
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 19/129 (14%)
Query: 108 DVAWH--LLHESLFGSVADDQKLMIW--DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
DVAW +L S SV+ D+ +IW D K + + S++ S
Sbjct: 211 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGN 269
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA D V LW + E + +V S G +D
Sbjct: 270 VLALSGGDNKVTLWK--------ENLEGKWEPAGEVHQGG-----GGSGGGGATSKEFD- 315
Query: 224 SKIGEEQST 232
E
Sbjct: 316 GPCQNEIDL 324
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 76.3 bits (187), Expect = 2e-15
Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 13/167 (7%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
L + D L +++ S + S A++ + F + Y + D+TV
Sbjct: 183 LLLALYSPDGILDVYNLSSPDQ-ASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVC 239
Query: 177 WDLRN----LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+DLR L ++ K + ++A S L ++ K + +
Sbjct: 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299
Query: 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279
++ TA +D + + + ++
Sbjct: 300 DEESA------LCLQSDTADFTDMDVVCGDGGIAAILKTNDSFNIVA 340
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 67.5 bits (164), Expect = 2e-12
Identities = 19/155 (12%), Positives = 46/155 (29%), Gaps = 17/155 (10%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILATGSADKTVALWDL 179
+ ++ I D++++ V + E+ + + + T+
Sbjct: 99 LLYPGNQITILDSKTNKVLREIEV--DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSY 156
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ + E + +LA D L V++LS ++ S+
Sbjct: 157 EDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSS-PDQASS------- 207
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
AKI + + N W + + +
Sbjct: 208 ----RFPVDEEAKIKEVKFADNGYW-MVVECDQTV 237
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 1e-04
Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 11/113 (9%)
Query: 122 VADDQKLMIWDTRSHNVSK--PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
V DQ ++ +D R + P++T+ + + ++A + ++ ++
Sbjct: 231 VECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290
Query: 180 RNLKLKLHSFE--------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
K K + + S + + + I A T+ ++ L+
Sbjct: 291 DK-KTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSFNIVALT 342
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 77.2 bits (189), Expect = 2e-15
Identities = 24/182 (13%), Positives = 58/182 (31%), Gaps = 29/182 (15%)
Query: 108 DVAWHLLHES-----LFGSVADDQKLMIWDTRSHN--------VSKPSHTVDAHTAEVNC 154
D+ WH + V+ + + + + KPS T+ + +
Sbjct: 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITT 271
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETILASS 212
F + + G + VA +DL + ++ + H I V +S +T++++
Sbjct: 272 FDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329
Query: 213 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
D ++++ D + + + + P I S
Sbjct: 330 AVDGYFYIFNPK------------DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377
Query: 273 NI 274
++
Sbjct: 378 SL 379
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 8e-09
Identities = 17/160 (10%), Positives = 39/160 (24%), Gaps = 25/160 (15%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
V + + L +R+ H + + + + + +
Sbjct: 359 VPVVYCP-QIYSYIYSDGASSLRAVPSRAA---FAVHPLVSRETTITAIGVSRLHPMV-L 413
Query: 167 TGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
GSAD ++ + + L K S +++ +S ++ S +
Sbjct: 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYE-------- 465
Query: 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263
I I+ WN
Sbjct: 466 --------VYPLTVNDVSKAKIDAHGIN-ITCTKWNETSA 496
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 6e-15
Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 26/155 (16%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D L++WD K + + HT + ++ + + S D T+ +WDL
Sbjct: 286 GS--YDNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRC-ISASMDTTIRIWDL 339
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
N +L +++ + H + ++ S L S+ D + WD + + +
Sbjct: 340 ENGEL-MYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAND-YSRKFS------- 387
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
HT + ++ ++ ++ S SE+
Sbjct: 388 -------YHHTNLSAITTFYVSDNILV-SGSENQF 414
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 3e-14
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 25/166 (15%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G+ DD+ + ++D+ + K + H V L + IL +GS D+TV +WD+
Sbjct: 138 GA--DDKMIRVYDSIN---KKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDI 190
Query: 180 RNLKLKLHSFESHKDEI--FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
+ H FE H + + N + + D LHVW L K E
Sbjct: 191 KKGCC-THVFEGHNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPK-ESSVPDHGEEH 247
Query: 238 GPPELLFIHG----------GHTAKISDFSWNPNEPWVICSVSEDN 273
P + GH A + S + V+ S S DN
Sbjct: 248 DYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVV-SGSYDN 290
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 20/122 (16%)
Query: 115 HESLFGSVA----------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
H +L G + D + WD ++ H HT +F S+ I
Sbjct: 351 HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYV-SDNI 405
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWD 222
L +GS + +++LR+ KL + D+I+ V + +T++A+ L + D
Sbjct: 406 LVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILD 462
Query: 223 LS 224
S
Sbjct: 463 FS 464
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 37/178 (20%), Positives = 57/178 (32%), Gaps = 48/178 (26%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYSEYILATGSADKTVALW 177
GS D+ + +WD + +H + H + V CL +YI TGS D T+ +W
Sbjct: 179 GS--TDRTVRVWDIKK---GCCTHVFEGHNSTVRCLDIVEYKNIKYI-VTGSRDNTLHVW 232
Query: 178 DLRNLKLK----------------------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
L + H + V S H I+ S D
Sbjct: 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH-GNIVVSGSYD 289
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L VWD+++ + GHT +I ++ S S D
Sbjct: 290 NTLIVWDVAQ-MKCLYILS-------------GHTDRIYSTIYDHERKR-CISASMDT 332
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 9/107 (8%), Positives = 30/107 (28%), Gaps = 6/107 (5%)
Query: 126 QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185
+KL+I + ++++ ++ L+ + W +
Sbjct: 57 KKLLISENFVSPKG--FNSLNLKLSQKYPKLSQQ-DRLRLSFLENIFILKNWYNPKFVPQ 113
Query: 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ H + + + + D+ + V+D +
Sbjct: 114 RTTLRGHMTSVITC-LQFEDNYV-ITGADDKMIRVYDSIN-KKFLLQ 157
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 7e-15
Identities = 34/157 (21%), Positives = 52/157 (33%), Gaps = 25/157 (15%)
Query: 124 DDQKLMIWDTRSHNVS--KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181
D+ L+ W + P + H+ V + Y + S DKT+ LWD+
Sbjct: 38 RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDKTLRLWDVAT 96
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
+ F HK ++ V I S D+ + VW + G+ +T
Sbjct: 97 GET-YQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIK--GQCLATLL------- 145
Query: 242 LLFIHGGHTAKISDFSWNPNEPWV-----ICSVSEDN 273
GH +S PNE I S D
Sbjct: 146 ------GHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-14
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-----ILATGSADKTV 174
GS D+ + +W + + T+ H V+ + P + + + DK V
Sbjct: 125 GS--RDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
W+L ++ F H I + SP + T++AS+G D + +W+L+ + T
Sbjct: 179 KAWNLNQFQI-EADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAA-KKAMYTLS 235
Query: 235 AED 237
A+D
Sbjct: 236 AQD 238
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 1e-12
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
S D+ L +WD + + H ++V + + + I +GS DKT+ +W +
Sbjct: 83 AS--WDKTLRLWDVAT---GETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTI 136
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNE-----TILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + L + H D + QV+ P+ + + S+G D+ + W+L++ + ++
Sbjct: 137 KG-QC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEAD-- 191
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + I+ + +P+ I S +D
Sbjct: 192 -----------FIGHNSNINTLTASPDGTL-IASAGKDG 218
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 6e-12
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK----LHSFESHKDEIFQ 198
T++ H V L+ + +L + S DKT+ W L K + SF+ H +
Sbjct: 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQD 70
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+ + S+ D+ L +WD++ GE
Sbjct: 71 CTLTA-DGAYALSASWDKTLRLWDVAT-GETYQR 102
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 5e-11
Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD-- 178
S D ++M+W+ + K +T+ A EV L+F+P Y LA + + ++
Sbjct: 213 SAGKDGEIMLWNLAA---KKAMYTLSAQD-EVFSLAFSPNR-YWLAAAT-ATGIKVFSLD 266
Query: 179 ----LRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ +L+ + ++ + + WS + L + TD + VW +
Sbjct: 267 PQYLVDDLRPEFAGYSKAAEPHAVSLAWSA-DGQTLFAGYTDNVIRVWQVM 316
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245
+ E H + + S +L S+ D+ L W L + +D + G P F
Sbjct: 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKL-------TGDDQKFGVPVRSFK 62
Query: 246 HGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH+ + D + + + S S D
Sbjct: 63 --GHSHIVQDCTLTADGAY-ALSASWDK 87
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 8e-15
Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 18/170 (10%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+ + +++ D S + + A + Y + L
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIG---SPSFQALTNNEANLGICRICKYGDDKLIA 117
Query: 168 GSADKTVALWDLRN---LKLKLHSFESHKDEIFQVQWSPH-NETILASSGTDRRLHVWDL 223
S D + + D RN + + + S+ ++ ++ N + L + ++ + L
Sbjct: 118 ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL 177
Query: 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
++ T G +I D + P E S D
Sbjct: 178 PLCEDDNGT-----------IEESGLKYQIRDVALLPKEQEGYACSSIDG 216
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 5e-14
Identities = 21/202 (10%), Positives = 60/202 (29%), Gaps = 13/202 (6%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
D L ++ + + + C +F ++ + G+ + DL
Sbjct: 31 WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
+ +++ + + + + L ++ D + V D G+ +
Sbjct: 91 S-FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD----------GVIAV 139
Query: 244 FIHGGHTAKISD--FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGIS 301
+ K+ + F+ + N +I ++ + + D T+ ++
Sbjct: 140 KNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV 199
Query: 302 STASPTASSTASESPTPTNSVH 323
+ A S +V
Sbjct: 200 ALLPKEQEGYACSSIDGRVAVE 221
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 1e-09
Identities = 12/124 (9%), Positives = 32/124 (25%), Gaps = 17/124 (13%)
Query: 152 VNCLSFNPYSEYILATGSADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETIL 209
++ + P L S D ++ ++ + + L +K + + + + +
Sbjct: 14 ISDIKIIPSKSL-LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72
Query: 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269
+ DL Q + A + + +
Sbjct: 73 YVGTVQGEILKVDLIGSPSFQ--------------ALTNNEANLGICRICKYGDDKLIAA 118
Query: 270 SEDN 273
S D
Sbjct: 119 SWDG 122
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 8e-06
Identities = 16/155 (10%), Positives = 49/155 (31%), Gaps = 28/155 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++ ++ + + ++ ++ P + A S D VA+
Sbjct: 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224
Query: 181 N-----LKLKLHSFESHKDE---------IFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+ K +F H+ + +++SP ++ + ++G+D + W+L
Sbjct: 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNL--- 280
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261
++ + + + + N
Sbjct: 281 ----------QTRKKIKNFAKFNEDSVVKIACSDN 305
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 14/116 (12%)
Query: 109 VAWHLLHESLFGSVADDQKLMIW---DTRSHNVSKPSHTVDAHTAE---------VNCLS 156
VA + + + D ++ + D S H VN +
Sbjct: 199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIE 258
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 212
F+P +++ T +D ++ W+L+ K + + ++D + ++ S N LA+S
Sbjct: 259 FSPRHKFL-YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSD-NILCLATS 312
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 9e-15
Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ L IWD + + + + L+ +P S+ + +D +A+WDL
Sbjct: 114 VGGEASTLSIWDLAAPT-PRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLH 171
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
N L + F+ H D + S + T L + G D + WDL + G +
Sbjct: 172 NQTL-VRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLRE-GRQLQQH------- 221
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
T++I + P W+ E +
Sbjct: 222 -------DFTSQIFSLGYCPTGEWLA-VGMESS 246
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 67.1 bits (165), Expect = 2e-12
Identities = 21/136 (15%), Positives = 39/136 (28%), Gaps = 17/136 (12%)
Query: 111 WHLLHESLFGSVA---DDQKL--------MIWDTRSHNVSKP--SHTVDAHTAEVNCLSF 157
L H + +V + + +WD P +
Sbjct: 46 NTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL 105
Query: 158 NPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDR 216
P + G T+++WDL ++ S + + SP + + S +D
Sbjct: 106 LPDGCTL-IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDG 163
Query: 217 RLHVWDLSKIGEEQST 232
+ VWDL
Sbjct: 164 NIAVWDLHN-QTLVRQ 178
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 8e-12
Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 26/154 (16%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G D + WD R + D T+++ L + P E++ A G V + +
Sbjct: 201 GG--LDNTVRSWDLREG---RQLQQHD-FTSQIFSLGYCPTGEWL-AVGMESSNVEVLHV 253
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
K + H+ + ++++ + S+G D L+ W G
Sbjct: 254 N--KPDKYQLHLHESCVLSLKFAYCGKWF-VSTGKDNLLNAWRT-PYGASIFQS------ 303
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
++ + + ++ +++ + S D
Sbjct: 304 --------KESSSVLSCDISVDDKYIV-TGSGDK 328
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 1e-10
Identities = 9/103 (8%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + + + + + H + V L F ++ + D + W
Sbjct: 241 VGMESSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTP 295
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ S ++ + + D++ V+++
Sbjct: 296 YGASI--FQSKESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 4e-08
Identities = 13/126 (10%), Positives = 31/126 (24%), Gaps = 14/126 (11%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
+ + D + R+ + +++ H + + V S
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ-INTLN-HGEVVCAVTISNPTRH 65
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267
+ +G + VWD+ + P I P+ +
Sbjct: 66 V--YTGGKGCVKVWDI---------SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT-LI 113
Query: 268 SVSEDN 273
E +
Sbjct: 114 VGGEAS 119
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 75.4 bits (185), Expect = 1e-14
Identities = 47/283 (16%), Positives = 74/283 (26%), Gaps = 53/283 (18%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY------------ILATG 168
+ D K+ + + + N + +DAH VN S+ P + TG
Sbjct: 118 VASSDGKVSVVEFKE-NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176
Query: 169 SADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSPHNE--TILASSGTDRRLHVWDL 223
AD V +W + + + E H D + V WSP + LAS DR +W
Sbjct: 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236
Query: 224 SKIGEEQSTEDAEDGPPE-LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--------- 273
D E GP + L + SW+ + + DN
Sbjct: 237 ----------DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA-LSGGDNKVTLWKENL 285
Query: 274 --------IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325
+ + + T + I S +
Sbjct: 286 EGKWEPAGEVHQGGGGSGGGGATSKEFDGPCQNEIDLLFSECNDEIDNAKLIMKERRFTA 345
Query: 326 NYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSI 368
+Y F L S TE
Sbjct: 346 SYT--FAKFS----TGSMLLTKDIVGKSGVSIKRLPTELQRKF 382
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 1e-13
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 18/141 (12%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVN--CLSFNPYSEYILATGSADKTVALWDLRN 181
D+ + I++ K T+ H V + + ILA+ S D V +W N
Sbjct: 29 SDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEEN 86
Query: 182 LKL-KLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ ++ H + VQW+PH +L + +D ++ V + ++
Sbjct: 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV------------EFKENG 134
Query: 240 PELLFIHGGHTAKISDFSWNP 260
I H ++ SW P
Sbjct: 135 TTSPIIIDAHAIGVNSASWAP 155
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQW 201
+AH ++ + Y + LAT S+DKT+ ++++ KL + H+ +++V W
Sbjct: 3 VIANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW 61
Query: 202 S-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+ P TILAS D ++ +W E+G + +H H+A ++ W P
Sbjct: 62 AHPKFGTILASCSYDGKVLIW------------KEENGRWSQIAVHAVHSASVNSVQWAP 109
Query: 261 NEP-WVICSVSEDN 273
+E ++ S D
Sbjct: 110 HEYGPLLLVASSDG 123
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 4e-07
Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 38/281 (13%)
Query: 108 DVAWH--LLHESLFGSVADDQKLMIW--DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
DVAW +L S SV+ D+ +IW D K + + S++
Sbjct: 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN- 267
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA D V LW + E + +V ++ S G +D
Sbjct: 268 VLALSGGDNKVTLWK--------ENLEGKWEPAGEV-----HQGGGGSGGGGATSKEFDG 314
Query: 224 SKI--------GEEQSTEDAEDGPPELLFIHGGHTAKISD------FSWNPNEPWVICSV 269
++A+ E F AK S I +
Sbjct: 315 PCQNEIDLLFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGVSIKRL 374
Query: 270 SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329
+ + D D + ++ S ++ + + N W+
Sbjct: 375 PTELQRKFLFDDVYLDKEIEKVTIEARKSNPYPQISESSLLFKDALDYMEKTSSDYNLWK 434
Query: 330 -GLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSIW 369
+LFD T+ + + + W
Sbjct: 435 LSSILFD-----PVSYPYKTDNDQVKMALLKKERHCRLTSW 470
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 72.5 bits (179), Expect = 3e-14
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D L +WD + + HT +V ++F+ + I +GS DKT+ LW+
Sbjct: 104 GS--WDGTLRLWDLTTG---TTTRRFVGHTKDVLSVAFSSDNRQI-VSGSRDKTIKLWNT 157
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRRLHVWDLSKIGEEQST 232
+ ESH + + V++SP++ I+ S G D+ + VW+L+ + ++
Sbjct: 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-CKLKTN 210
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 70.2 bits (173), Expect = 2e-13
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
D+ + +W+ + K HT +N ++ +P A+G D LWDL K
Sbjct: 193 WDKLVKVWNLANC---KLKTNHIGHTGYLNTVTVSPDGSLC-ASGGKDGQAMLWDLNEGK 248
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
L++ + D I + +SP+ + + T + +WDL E
Sbjct: 249 H-LYTLDGG-DIINALCFSPNRYWL--CAATGPSIKIWDLEG-KIIVDELKQEVISTSS- 302
Query: 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + +W+ + + + DN
Sbjct: 303 ---KAEPPQCTSLAWSADGQTLF-AGYTDN 328
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 4e-13
Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 9/118 (7%)
Query: 120 GSVADDQKLMIWDTRSHNVSKP-SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
G D ++ T+ H V ++ P ++ + S DKT+ +W
Sbjct: 10 GV--DLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWK 67
Query: 179 LRNLKLK----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
L + + H + V S + S D L +WDL+ G
Sbjct: 68 LTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLTT-GTTTRR 123
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 2e-12
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S D + M+WD K +T+D +N L F+P Y L + ++ +WDL
Sbjct: 232 SGGKDGQAMLWDLNE---GKHLYTLDGGDI-INALCFSPNR-YWLCAAT-GPSIKIWDLE 285
Query: 181 NLKLK--------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ S ++ + + WS + L + TD + VW ++
Sbjct: 286 GKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVT 336
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-09
Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 165 LATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
++G T L+ + + + + H + Q+ +P ++ S+ D+ + +W
Sbjct: 7 HSSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 66
Query: 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L + ++ G P+ GH+ +SD + + + S S D
Sbjct: 67 KL-------TRDETNYGIPQRALR--GHSHFVSDVVISSDGQF-ALSGSWDG 108
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 4e-14
Identities = 19/132 (14%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSP 203
+ + +P L TGS + +W+L+ + + Q+ P
Sbjct: 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP 121
Query: 204 HNETILASSGTDRRLHVWDL--SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261
N A S D ++ V + + E + E L G + + ++
Sbjct: 122 -NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180
Query: 262 EPWVICSVSEDN 273
E ++ +++ +
Sbjct: 181 EKSLLVALTNLS 192
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 19/184 (10%), Positives = 52/184 (28%), Gaps = 31/184 (16%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
A + +D + IW+ + S ++ V ++ P + A
Sbjct: 69 SAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAF-A 127
Query: 167 TGSADKTVALWDL---------------RNLKLKLHSFESHKDEIFQVQWSPHNETILAS 211
S D + + + K+ L +F ++ + + +++L +
Sbjct: 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187
Query: 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271
R+ ++D+ E + +S + + +
Sbjct: 188 LTNLSRVIIFDIRT-LERLQI-----------IENSPRHGAVSSICIDEECCV-LILGTT 234
Query: 272 DNIM 275
I+
Sbjct: 235 RGII 238
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 3e-12
Identities = 16/168 (9%), Positives = 43/168 (25%), Gaps = 27/168 (16%)
Query: 121 SVADDQKLMIWDTRSHNVSKPS-------------HTVDAHTAEVNCLSFNPYSEYILAT 167
+ D ++++ + + V +F + +L
Sbjct: 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187
Query: 168 GSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ V ++D+R L+ L E + + +L T + +WD+ +
Sbjct: 188 LTNLSRVIIFDIRTLER-LQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDI-R 244
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ F + + ++ S
Sbjct: 245 FNVLIRS---------WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 2e-10
Identities = 21/201 (10%), Positives = 51/201 (25%), Gaps = 52/201 (25%)
Query: 124 DDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182
+ IWD R + + S A V F + I+ GS+ + +W+
Sbjct: 234 TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293
Query: 183 KLKLHSFESHKDEIFQVQWSP------------------------HNETILASSGTDRRL 218
++F + ++ + P N+ IL + +
Sbjct: 294 HC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSI 352
Query: 219 HVWDLSKI-----------------------GEEQSTEDAEDGPPELLFIHGGHTAKISD 255
++ L+++ + + H I+
Sbjct: 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINS 412
Query: 256 --FSWNPNEPWVICSVSEDNI 274
P ++ + +
Sbjct: 413 ISTCEVDETPLLV-ACDNSGL 432
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 9e-08
Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 16/137 (11%)
Query: 143 HTVDAHTAEV----NCLSFNPYSEYILATGSADKTVALWDLRNL--KLKLHSFESHKDEI 196
H + + + P G + V ++ NL KL E+ + I
Sbjct: 7 HHGEGDVESIEKFLSTFKILPPLRDYKEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSI 66
Query: 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256
SP L + + +W+L +I E L + ++ ++
Sbjct: 67 TSSAVSPGETPYLITGSDQGVIKIWNLKEI------IVGEVYSSSLTY---DCSSTVTQI 117
Query: 257 SWNPNEPWVICSVSEDN 273
+ PN S+D
Sbjct: 118 TMIPNFDA-FAVSSKDG 133
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 8e-14
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 31/162 (19%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTV 174
S+FGS D + D + + CLSF+P + L GS V
Sbjct: 16 SMFGSATTDNHNPMKDIE---------VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDV 66
Query: 175 ALWDLR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
W+++ + + + + H + V WS + + + ++ D+ +WDLS +
Sbjct: 67 RCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDLSS-NQAIQI- 123
Query: 234 DAEDGPPELLFIHGGHTAKISD--FSWNPNEPWVICSVSEDN 273
H A + + PN V+ + S D
Sbjct: 124 -------------AQHDAPVKTIHWIKAPNYSCVM-TGSWDK 151
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 13/114 (11%)
Query: 120 GSVADDQKLMIWDT----------RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169
GS+ + + + H + + + VN ++F+P + AT
Sbjct: 234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVG 292
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+D + WD + KL + E I ++ N I A + + +
Sbjct: 293 SDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEF 344
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 18/127 (14%), Positives = 37/127 (29%), Gaps = 22/127 (17%)
Query: 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE-- 206
+ F + + + D + D+ S D I + +SP
Sbjct: 2 SLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVT-------SSPDDSIGCLSFSPPTLPG 54
Query: 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266
L + + W++ G+ P+ HT + D W+ + +
Sbjct: 55 NFLIAGSWANDVRCWEVQDSGQTI---------PKAQQ---MHTGPVLDVCWSDDGSK-V 101
Query: 267 CSVSEDN 273
+ S D
Sbjct: 102 FTASCDK 108
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 21/155 (13%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-ILATGSADKTVALWDL 179
+ + D+ +WD S+ + H A V + + Y + TGS DKT+ WD
Sbjct: 103 TASCDKTAKMWDLSSNQAI----QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
R+ + + + P ++A++ +R L V+ L E
Sbjct: 159 RSSNP-MMVLQLPERCYCADVIYPM--AVVATA--ERGLIVYQLENQPSEFRR------- 206
Query: 240 PELLFIHGGHTAKISDFSWNP-NEPWVICSVSEDN 273
+ ++ + N+P S +
Sbjct: 207 --IESPLKHQHRCVA-IFKDKQNKPTGFALGSIEG 238
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+ W+ + HT V + ++ + T S DKT +WDL + +
Sbjct: 62 WANDVRCWEV-QDSGQTIPKAQQMHTGPVLDVCWSDDGSKV-FTASCDKTAKMWDLSSNQ 119
Query: 184 LKLHSFESHKDEIFQVQWSPH-NETILASSGTDRRLHVWDLS 224
H + + W N + + + D+ L WD
Sbjct: 120 AI--QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 42/183 (22%)
Query: 105 SRQDVAWHLLHESLFGSVAD---------DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
S + L E + + ++ L+++ + S+ + C+
Sbjct: 160 SSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP-SEFRRIESPLKHQHRCV 218
Query: 156 SFNP---YSEYILATGSADKTVALWDL-------RNLKLKLHS-------FESHKDEIFQ 198
+ A GS + VA+ + N K H +
Sbjct: 219 AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ + P + T+ A+ G+D R W D + L IS +
Sbjct: 279 IAFHPVHGTL-ATVGSDGRFSFW------------DKDAR--TKLKTSEQLDQPISACCF 323
Query: 259 NPN 261
N N
Sbjct: 324 NHN 326
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 12/93 (12%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+A+H +H +V D + WD + T + ++ FN I A
Sbjct: 278 GIAFHPVH-GTLATVGSDGRFSFWDKDAR---TKLKTSEQLDQPISACCFNHNGN-IFAY 332
Query: 168 GSADKTVALWDLRNL----KLKLHSFESHKDEI 196
S+ + N + L + +E+
Sbjct: 333 ASSYDWSKGHEFYNPQKKNYIFLR---NAAEEL 362
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 70.9 bits (173), Expect = 2e-13
Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 28/227 (12%)
Query: 123 ADDQKLMIWDTRSHNVS-----KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
ADD ++ +W + S ++ T + F+P S S+ T+ L
Sbjct: 195 ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254
Query: 178 DLRNLKLKLHS---------------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D+R L F I V++S ++ + + VWD
Sbjct: 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM--TRDYLSVKVWD 312
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS--WNPNEPWVICSVSEDNIMQEYCD 280
L+ T + L + F WN ++ + + S +N + +
Sbjct: 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDR 371
Query: 281 STDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY 327
+T D ++ R N + P + + SV ++
Sbjct: 372 NTKRDITL---EASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDF 415
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 4e-08
Identities = 22/212 (10%), Positives = 61/212 (28%), Gaps = 50/212 (23%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRS-------------HNVSKPSHTVDAHTAEVNCL 155
+H + F + + + D R+ + ++ +
Sbjct: 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDV 291
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD---------------EIFQVQ 200
F+ Y+ T +V +WDL + +++ H+ + F+
Sbjct: 292 KFSHSGRYM-MTRD-YLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECC 349
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTED------------------AEDGPPEL 242
W+ + + + + ++D + + + E+
Sbjct: 350 WNGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEI 408
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
KI +W+P E + + + +N+
Sbjct: 409 SVDSLDFNKKILHTAWHPKENIIAVA-TTNNL 439
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 9e-05
Identities = 28/205 (13%), Positives = 56/205 (27%), Gaps = 48/205 (23%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS-EYILAT 167
V + E+ S + + + +SH ++N + + P
Sbjct: 53 VIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLL 112
Query: 168 GSADKTVALWDLRNLKLKLHSF-------------------------------------- 189
+ DKT+ LW + + +
Sbjct: 113 STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172
Query: 190 -ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248
+H I + + ET L++ D R+++W L + D + E
Sbjct: 173 ANAHTYHINSISINSDYETYLSAD--DLRINLWHLEITDRSFNIVDIKPANME------E 224
Query: 249 HTAKISDFSWNPNEPWVICSVSEDN 273
T I+ ++PN S
Sbjct: 225 LTEVITAAEFHPNSCNTFVYSSSKG 249
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 8e-04
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 26/127 (20%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ A + W V A ++ + FN E LATG V ++
Sbjct: 2 AGAGGGNDIQWCFS--QVKGAVDDDVAEADIISTVEFNHSGEL-LATGDKGGRVVIFQQE 58
Query: 181 NLK-LKLHSFESHK---------------------DEIFQVQWSP-HNETILASSGTDRR 217
++ HS + ++I +++W P N S D+
Sbjct: 59 QENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118
Query: 218 LHVWDLS 224
+ +W +S
Sbjct: 119 IKLWKIS 125
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 30/153 (19%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +W+T + + T++ H + CL + ++ +GS+D T+ LWD+
Sbjct: 271 SASGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 324
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
L E H++ + +++ + + S D ++ VWDL + +
Sbjct: 325 CGAC-LRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDL-----VAALDPRAPAGT 375
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L H+ ++ ++ + I S S D+
Sbjct: 376 LCLRTLVEHSGRVFRLQFDEFQ---IVSSSHDD 405
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 6e-13
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 20/121 (16%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D + +WD ++ H V C+ F+ + +G+ D + +WDL
Sbjct: 312 GS--SDNTIRLWDIECG---ACLRVLEGHEELVRCIRFDNK---RIVSGAYDGKIKVWDL 363
Query: 180 RNLKLK--------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231
L + H +F++Q +E + SS D + +WD
Sbjct: 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQ---FDEFQIVSSSHDDTILIWDF-LNDPAAQ 419
Query: 232 T 232
Sbjct: 420 A 420
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G D + IWD + + + HT V CL ++ ++ TGS+D TV +WD+
Sbjct: 149 GL--RDNTIKIWDKNT---LECKRILTGHTGSVLCLQYDER---VIITGSSDSTVRVWDV 200
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
++ L++ H + + +++ N ++ + DR + VWD++
Sbjct: 201 NTGEM-LNTLIHHCEAVLHLRF---NNGMMVTCSKDRSIAVWDMA 241
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D + +WD + + +T+ H V L FN ++ T S D+++A+WD+
Sbjct: 189 GS--SDSTVRVWDVNT---GEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 240
Query: 180 RNLK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ H+ + V + ++ + S+ DR + VW+ S
Sbjct: 241 ASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTS 284
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190
W H++ + H + V CL ++ + + +G D T+ +WD L+
Sbjct: 116 WRCGRHSL-QRIHCRSETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLEC-KRILT 170
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
H + +Q ++E ++ + +D + VWD++ GE +T
Sbjct: 171 GHTGSVLCLQ---YDERVIITGSSDSTVRVWDVNT-GEMLNT 208
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 2e-13
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWD 178
S D+ + +W+T S + H V+C+ F+P + + + S DKTV +W+
Sbjct: 490 AS--RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 547
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
L N KL + H + V SP + ++ AS G D + +WDL G++ +
Sbjct: 548 LSNCKL-RSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDL-AEGKKLYS 598
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 6e-12
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D +L +WD + + HT +V ++F+ + I + S D+T+ LW+
Sbjct: 447 SGSWDGELRLWDLAA---GVSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTL 502
Query: 181 NLKLK--LHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQST 232
E H+D + V++SP + + S+ D+ + VW+LS + +ST
Sbjct: 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLRST 556
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 7e-12
Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 6/139 (4%)
Query: 98 QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157
N P + + + G D L T + T+ AHT V ++
Sbjct: 331 PNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAGLVLKGTMRAHTDMVTAIAT 390
Query: 158 NPYSEYILATGSADKTVALWDLRNLKLK----LHSFESHKDEIFQVQWSPHNETILASSG 213
+ I+ + S DK++ LW L H + V S + S
Sbjct: 391 PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGS 449
Query: 214 TDRRLHVWDLSKIGEEQST 232
D L +WDL+ G
Sbjct: 450 WDGELRLWDLAA-GVSTRR 467
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 5e-10
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 27/124 (21%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
G D +++WD K ++++A++ ++ L F+P + Y L + + + +WDL
Sbjct: 579 GG--KDGVVLLWDLAE---GKKLYSLEANS-VIHALCFSP-NRYWLCAAT-EHGIKIWDL 630
Query: 180 RN----LKLKLHS--------------FESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+ LK+ + + WS + + L S TD + VW
Sbjct: 631 ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVW 689
Query: 222 DLSK 225
+ +
Sbjct: 690 GIGR 693
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 22/157 (14%), Positives = 58/157 (36%), Gaps = 11/157 (7%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+ L + + + + + + + + ++ATG + TV + +L L+
Sbjct: 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR 218
Query: 184 L-----KLHSFESHKDEIFQVQWSPHNETILASS--GTDRRLHVWDLSKIGEEQSTEDAE 236
HS ++ + I V++SP + + + + +++ + GE +
Sbjct: 219 PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET-EFGERIGSLSVP 277
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ H++ + S+N + +CS D
Sbjct: 278 THSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDG 313
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 7e-11
Identities = 23/130 (17%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 121 SVADDQKLMIWDT---RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT---V 174
+ ++ + I + R + H++ ++ + + F+P LA + +
Sbjct: 202 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL-LAIAHDSNSFGCI 260
Query: 175 ALWD------LRNLKLKLHSFES------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
L++ + +L + HS ++ H + + ++ ET L S+G D +L WD
Sbjct: 261 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRFWD 319
Query: 223 LSKIGEEQST 232
+ E +T
Sbjct: 320 VKT-KERITT 328
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 130 IWDTRS----------HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
+++T + S+ S AH++ V LSFN E L + D + WD+
Sbjct: 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRFWDV 320
Query: 180 RNLKLKLHSFESHKDEIFQ----VQWSPHNETILASSGTDRRLHVW 221
+ + + + H D+I + H +++ D +
Sbjct: 321 KTKER-ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 9e-08
Identities = 12/123 (9%), Positives = 30/123 (24%), Gaps = 24/123 (19%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWD 178
+D+ + + + H+ + L T +W
Sbjct: 98 ITREDETKKVIFEKLDLLDSDMKK---HSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 154
Query: 179 LRN-----------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
L+ + S + V S ++A+ + + +
Sbjct: 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212
Query: 222 DLS 224
+LS
Sbjct: 213 ELS 215
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 5e-07
Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 21/148 (14%)
Query: 141 PSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR-----NLKLKLHSFESHKD 194
+ AH A++ +S + S D + +WD + N K K +S HK
Sbjct: 7 ATANAGKAHDADIFSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS 63
Query: 195 EIFQV-------QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247
+ V + + ++A++ L + +++ E + + L
Sbjct: 64 GLHHVDVLQAIERDAFEL-CLVATTSFSGDLLFYRITREDETKKVIFEKLDL--LDSDMK 120
Query: 248 GHTAKISDFSWNPNEPW--VICSVSEDN 273
H+ + + + + +
Sbjct: 121 KHSFWALKWGASNDRLLSHRLVATDVKG 148
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 20/169 (11%), Positives = 44/169 (26%), Gaps = 30/169 (17%)
Query: 121 SVADDQKLMIWDTRSHNVSKP---SHTVDAHTAE-------------------VNCLSFN 158
S + D L +WD + + P S++ H + V SF+
Sbjct: 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90
Query: 159 PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET--ILASSGTDR 216
D+T + + L + H + S L ++
Sbjct: 91 G-DLLFYRITREDETKKVIFEKLDLL-DSDMKKHSFWALKWGASNDRLLSHRLVATDVKG 148
Query: 217 RLHVWDLSKIGEEQSTEDAEDGP----PELLFIHGGHTAKISDFSWNPN 261
++W +E ++ P + + + +
Sbjct: 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 197
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 68.6 bits (167), Expect = 9e-13
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 16/142 (11%)
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN---LKLKLHSFESHK 193
V P + + L ++A +DK++ ++D+ LKL
Sbjct: 90 KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFS 149
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ + + T+ + ++ D++ I EE+ T E + GH + +
Sbjct: 150 KRPNAISIAEDDTTV-IIADKFGDVYSIDINSIPEEKFT-------QEPIL---GHVSML 198
Query: 254 SDFSWNPN--EPWVICSVSEDN 273
+D + I + D
Sbjct: 199 TDVHLIKDSDGHQFIITSDRDE 220
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 7e-11
Identities = 35/290 (12%), Positives = 85/290 (29%), Gaps = 25/290 (8%)
Query: 124 DDQKLMIWDTRSHNVSKPSH-TVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWDLR 180
+ D S K + + H + + + S+ + T D+ + +
Sbjct: 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ HK + + + +L S+G D ++ WD G+ ST D
Sbjct: 229 QCFIVDKWLFGHKHFVSSICCGK--DYLLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIK 285
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWV--ICSVSEDNIMQEYCDST----------DSDTKT 288
L + + + + E V I + + ++T
Sbjct: 286 PYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDL 345
Query: 289 MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348
I + S ++ + ++ V + F E ++
Sbjct: 346 ALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKN-----FAKFIEYNLNENSFVVNN 400
Query: 349 EEESSDRHSSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYH 398
E+ + + + +++ + +E Y +L++H +H
Sbjct: 401 EKSNEFDSAIIQSVQGDSNLVTKKEEIYPLYNVS--SLRKHGEHYSHHHH 448
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 1e-12
Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 33/159 (20%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV---ALW 177
SV+ D + +W V +N + ++ E + G D + L+
Sbjct: 34 SVSRDGTVRLWSKDD---QWLGTVVYTGQGFLNSVCYDSEKELL-LFGGKDTMINGVPLF 89
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
L++ H+ + + + ++ S D+ VW G
Sbjct: 90 ATSGEDP-LYTLIGHQGNVCSLSFQD---GVVISGSWDKTAKVWK---EGSLVYN----- 137
Query: 238 GPPELLFIHGGHTAKISD---FSWNPNEPWVICSVSEDN 273
L H A + D S++ N+ + S D
Sbjct: 138 ----LQ----AHNASVWDAKVVSFSENK---FLTASADK 165
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 1e-12
Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 9/113 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S ++D + + D + T + H + V C+ P + + + D+TV +W
Sbjct: 200 SCSNDGLIKLVDMHT---GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKE 254
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
N L I+ V N I+ S D + ++ K S +
Sbjct: 255 NGSL-KQVITLPAISIWSVDCMS-NGDIIVGSS-DNLVRIFSQEK-SRWASED 303
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 2e-12
Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 29/155 (18%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS D+ +W + + AH A V +SE T SADKT+ LW
Sbjct: 120 GS--WDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN 172
Query: 180 RNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ + +F H D + + S D + + D+ G+ T
Sbjct: 173 DKV---IKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT-GDVLRT------ 220
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + + PN I S ED
Sbjct: 221 ----YE---GHESFVYCIKLLPN--GDIVSCGEDR 246
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 2e-11
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 26/144 (18%)
Query: 130 IWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 189
++ T P +T+ H V LSF ++ +GS DKT +W +L +++
Sbjct: 88 LFATSG---EDPLYTLIGHQGNVCSLSFQDG---VVISGSWDKTAKVWKEGSL---VYNL 138
Query: 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249
++H ++ + +E ++ D+ + +W + T G H
Sbjct: 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQ---NDKVIKT------------FSGIH 183
Query: 250 TAKISDFSWNPNEPWVICSVSEDN 273
+ + + S S D
Sbjct: 184 NDVVRHLAVVDDG--HFISCSNDG 205
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 3e-11
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 18/132 (13%)
Query: 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 201
S T+ H +V + S +A+ S D TV LW + L + + + V +
Sbjct: 11 SATLKGHDQDVRDVVAVDDS--KVASVSRDGTVRLWSKDDQWL-GTVVYTGQGFLNSVCY 67
Query: 202 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261
+ +L G D ++ L P I GH + S+
Sbjct: 68 DS-EKELLLFGGKDTMINGVPLF---------ATSGEDPLYTLI--GHQGNVCSLSFQDG 115
Query: 262 EPWVICSVSEDN 273
V+ S S D
Sbjct: 116 ---VVISGSWDK 124
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 68.4 bits (166), Expect = 1e-12
Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 18/173 (10%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVS--------KPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+ S + +D R+ + + V + +NP ++A
Sbjct: 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
AD ++A+ + K+ + + V WSP LA + + + + +
Sbjct: 169 LADGSIAVLQVTETV-KVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPTLQEK 226
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281
+ P F H ++ D W + I + D ++ D
Sbjct: 227 KVI--------PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 2e-08
Identities = 17/173 (9%), Positives = 44/173 (25%), Gaps = 15/173 (8%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D+ W+ S+ D + + + T V + ++P + + A
Sbjct: 154 DMKWNPTVPSMVAVCLADGSIAVLQVTE---TVKVCATLPSTVAVTSVCWSPKGKQL-AV 209
Query: 168 GSADKTVALWDL-----RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
G + TV + + + H + V W + + D
Sbjct: 210 GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD------G 263
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
+ + + I + + + E +++
Sbjct: 264 TLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLV 316
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 66.6 bits (162), Expect = 3e-12
Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 11/176 (6%)
Query: 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161
+ H+ GS Q + + AHT + + N
Sbjct: 152 YSNEFNLGQIHITKLQSSGSA-TTQDQGVQQKAI---LGKGVLIKAHTNPIKMVRLNR-K 206
Query: 162 EYILATGSADKT-VALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRL 218
++AT S D T + ++ + + F + ++ ++WS + + LA L
Sbjct: 207 SDMVATCSQDGTIIRVFKTEDGV-LVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTL 264
Query: 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
HV+++ ++ + F I +SE ++
Sbjct: 265 HVFEIFN-DQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 18/113 (15%)
Query: 130 IWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL-KL 186
++ T A+V + ++ LA S T+ ++++ N + K
Sbjct: 222 VFKTEDG---VLVREFRRGLDRADVVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKR 277
Query: 187 HSFESHKDEI-FQVQWS----------PHNETILASSGTDRRLHVWDLSKIGE 228
H+ + + FQ +WS +A + VW +++ E
Sbjct: 278 HALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIE 330
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 6e-07
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196
P + + V FN L + K+ ++++ + + H +
Sbjct: 7 ITRNPIVPENHVSNPVTDYEFNQDQSC-LILST-LKSFEIYNVHPVAHIMSQEMRH---L 61
Query: 197 FQVQWSPHNETILASSGTDRRLHVWDLSK 225
+V+ + +G +H+WD K
Sbjct: 62 SKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-10
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
W +TDEQR+YY QF +Q + I G A++FF SKLP+ EL IW
Sbjct: 1 WKITDEQRQYYVNQFKTIQPDLN------GFIPGSAAKEFFTKSKLPILELSHIW 49
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 4e-10
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 346 LGTEEESSDRHSSD-NDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQV 404
+G + W++T E+R + QFH+L P I+G
Sbjct: 1 MGHHHHHHSHVAQFPTPFGGSLDTWAITVEERAKHDQQFHSL-------KPISGFITGDQ 53
Query: 405 ARKFFENSKLPVTELRKIW 423
AR FF S LP L +IW
Sbjct: 54 ARNFFFQSGLPQPVLAQIW 72
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 4e-10
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 357 SSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPV 416
S +++ + W +T+EQREYY QF +LQ S ISG VA+ FF SKL +
Sbjct: 2 SLQDNSSYPDEPWRITEEQREYYVNQFRSLQPDPS------SFISGSVAKNFFTKSKLSI 55
Query: 417 TELRKIW 423
EL IW
Sbjct: 56 PELSYIW 62
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-09
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 367 SIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
S W++ E + Y F +L P +SG + NSKLPV L ++W
Sbjct: 5 SPWAVKPEDKAKYDAIFDSL-------SPVNGFLSGDKVKPVLLNSKLPVDILGRVW 54
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-09
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
W ++ ++ Y F + +SG R+ F + LP T L IW
Sbjct: 2 WVVSPAEKAKYDEIFLKTDKDMD------GFVSGLEVREIFLKTGLPSTLLAHIW 50
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 3e-09
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
W++ R Y+ F++ + S ++G AR S LP +L IW
Sbjct: 6 WAVPQSSRLKYRQLFNSHDKTMS------GHLTGPQARTILMQSSLPQAQLASIW 54
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 9e-09
Identities = 23/223 (10%), Positives = 68/223 (30%), Gaps = 26/223 (11%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
+++ +F+ +LA + V ++ + +++ + + I ++++
Sbjct: 16 MSSKPIAAAFDFTQN-LLAIATVTGEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIY- 71
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267
L ++V L + +T KI+ + + W +
Sbjct: 72 -LVVINAKDTVYVLSLYS-QKVLTTV--------------FVPGKITSIDTDASLDW-ML 114
Query: 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE-KN 326
++ M Y D D + + + S + S S P + +
Sbjct: 115 IGLQNGSMIVY----DIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170
Query: 327 YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSIW 369
Y + + ++ E ++ + + T + +
Sbjct: 171 YEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 8e-08
Identities = 21/159 (13%), Positives = 49/159 (30%), Gaps = 12/159 (7%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+L ++ I+ + V + + + F L +A TV +
Sbjct: 30 NLLAIATVTGEVHIYGQQQVEVVIKLE----DRSAIKEMRFVK--GIYLVVINAKDTVYV 83
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
L K+ + +I + + + + + V+D+ + +Q +
Sbjct: 84 LSLY--SQKVLTTVFVPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDR---DQLSSFKL 137
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
D + F + I WNP + + E +
Sbjct: 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 2e-07
Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 40/239 (16%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSH--------NVSKPSHTVDAHTAEVNCLSFNPY 160
+ + + + ++++D N+ K S A + + + +NP
Sbjct: 104 IDTDASLDWML-IGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162
Query: 161 SEYILATGSADKTVALWDLRNLKLK-----------------LHSFESHKDEIFQVQWSP 203
+ + + L ++K + E ++ Q + P
Sbjct: 163 DIGTVLISY-EYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221
Query: 204 HNETILASSGTDRRLHVWDLS--KIGEEQSTEDAEDGPPELLFIHGGHT--AKISDFSWN 259
N + + D L WD + + ++ + E P+ +I T AKIS W
Sbjct: 222 -NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW- 279
Query: 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR-SNGGISSTASPTASSTASESPT 317
+C + + + S L I S S +P
Sbjct: 280 ------MCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPK 332
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 18/162 (11%), Positives = 44/162 (27%), Gaps = 12/162 (7%)
Query: 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158
F S L S+A +W + +
Sbjct: 385 IFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA 444
Query: 159 PYSEYILATGSADKTVALWDLRNLKLKLHSF----------ESHKDEIFQVQWSPHNETI 208
Y TG ++ +V ++D + ++ ++ ++ + + ++ ++
Sbjct: 445 EYGT-AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET-LE 502
Query: 209 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
LA S + ++ E G E+ F
Sbjct: 503 LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLN 544
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 2e-08
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 347 GTEEESSDRHSSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVAR 406
GT + E ++ + + + + Y F+ L P I+G A+
Sbjct: 21 GTMNGPFGHGYGEGAGEGIDDVEWVVGKDKPTYDEIFYTL-------SPVNGKITGANAK 73
Query: 407 KFFENSKLPVTELRKIW 423
K SKLP T L KIW
Sbjct: 74 KEMVKSKLPNTVLGKIW 90
|
| >2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} Length = 550 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 6e-07
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 7/124 (5%)
Query: 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSD 359
+ ++ + + + + E ++ E D D
Sbjct: 381 LKPKLLEALDDMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGPDEAIED 440
Query: 360 NDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTEL 419
+ + + + + Y F+NL P+ +SG A+ + +KLP + L
Sbjct: 441 GEEGSEDDAEWVVTKDKSKYDEIFYNL-------APADGKLSGSKAKTWMVGTKLPNSVL 493
Query: 420 RKIW 423
+IW
Sbjct: 494 GRIW 497
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 2e-06
Identities = 67/493 (13%), Positives = 139/493 (28%), Gaps = 161/493 (32%)
Query: 44 EPFD-----DAVEERVINEEYK-IWKKNTP-----FLYDLVVNNYVANISCILNISILFF 92
+ FD D + + EE I L+ +++ + F
Sbjct: 31 DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE-------EMVQKFV 83
Query: 93 EIIFTQNFPF---PLSRQDVAWHLL-------HESLFGSVADDQKLMIWDTRSHNVSK-- 140
E + N+ F P+ + ++ + L+ K + R K
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS--RLQPYLKLR 141
Query: 141 -------PSHTVDAH----------TAEVNCLSF-----NPYSEYILATGSADKTVA--- 175
P+ V +V CLS+ + + L + +
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200
Query: 176 -LWDL---------------RNLKLKLHSFESHKDEIFQVQWSPHNET--ILASSGTDRR 217
L L N+KL++HS ++ + + P+ +L
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL--KSKPYENCLLVL-----L-- 251
Query: 218 LHVWDL---------SKI-----------------GEEQSTEDAEDG--PPEL--LFIHG 247
+V + KI S + P E+ L
Sbjct: 252 -NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL--- 307
Query: 248 GHTAKISDFSWN--PNE-----PWVICSVSEDNIMQEYCDSTD--SDTKTMRLDSIRSNG 298
K D P E P + ++E +++ + D +L +I
Sbjct: 308 ---LKYLDCRPQDLPREVLTTNPRRLSIIAE--SIRDGLATWDNWKHVNCDKLTTIIE-- 360
Query: 299 GISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF--DILVCEEQRQLLGTEEESSDRH 356
SS P + + K + + L +F + L+ + SD
Sbjct: 361 ----------SSLNVLEP----AEYRKMFDR-LSVFPPSAHIPTILLSLIWFDVIKSD-- 403
Query: 357 SSDNDTEDLNSIWSMTDEQREYYKTQFHNLQ---RHKSVSDPSYH--LISGQVARKFFEN 411
L+ +S+ ++Q + ++ + K ++ + H ++ K F++
Sbjct: 404 -VMVVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 412 SKLPVTELRKIWY 424
L L + +Y
Sbjct: 462 DDLIPPYLDQYFY 474
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 48/397 (12%), Positives = 106/397 (26%), Gaps = 140/397 (35%)
Query: 3 ISIQALTSPKLLLHLSQNAFFT----WSALPLSHSIYRFYRLCVAEPFDDAVEERVINEE 58
++++ SP+ +L + Q + W++ S + R+ + + ++
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK-LRI---HSIQAELRRLLKSKP 242
Query: 59 YK--------IWKKNT--PFLYDLVVNNYVANISC-IL------------------NISI 89
Y+ + F N+SC IL +IS+
Sbjct: 243 YENCLLVLLNVQNAKAWNAF-----------NLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 90 LFFEIIFTQN-----F-------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT-RSH 136
+ T + P L R+ + + S+ D WD +
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHV 350
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEY-------------------IL------------ 165
N K + ++ + +N L Y + ++
Sbjct: 351 NCDKLTTIIE---SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 166 ATGSADKTVALWDLRNLKLKLHS----FESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
++ + + + S + + + + H +I+ +
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL----HR-SIVDHYNIPKTFDSD 462
Query: 222 DLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKIS-------------DFSW------NPN 261
DL D + H G H I DF + + +
Sbjct: 463 DLIP--------PYLDQ---YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 262 EPWVICSVSEDNIMQ--EYCDS-TDSDTK-TMRLDSI 294
W + + Q Y D+D K +++I
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-06
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
+ Y+ + ++ + + A F + S LP L KIW
Sbjct: 3 LTQLSSGNPVYEKYYRQVEAGNT------GRVLALDAAAFLKKSGLPDLILGKIW 51
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 437 | |||
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.98 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.98 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.98 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.98 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.97 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.97 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.97 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.96 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.94 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.93 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.91 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.89 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.89 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.89 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.89 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.88 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.88 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.87 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.86 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.86 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.86 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.85 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.85 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.84 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.84 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.84 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.83 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.83 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.83 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.82 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.82 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.81 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.81 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.81 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.79 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.77 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.77 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.75 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.75 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.74 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.74 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.72 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.71 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.71 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.69 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.68 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.68 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.66 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.64 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.61 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.59 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.57 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.57 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.56 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.54 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.54 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.53 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.53 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.52 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.52 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.51 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.51 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.5 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.47 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.46 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.46 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.46 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.46 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.44 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.41 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.41 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.4 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.39 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.38 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.38 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.37 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.35 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.34 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.33 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.33 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.33 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.32 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.32 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.32 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.29 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.27 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.25 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.25 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.2 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.2 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.14 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.14 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.06 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.05 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.05 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.05 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.05 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.02 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.01 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.98 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.98 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.95 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.92 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.87 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.84 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.83 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.82 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.79 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.79 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.78 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.77 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.76 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.65 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.65 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.64 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.63 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.62 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.61 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.61 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.6 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.56 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.55 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.54 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.49 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.48 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.48 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.44 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.44 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.44 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.4 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.4 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.39 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.35 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.31 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.27 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.24 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.24 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.23 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.2 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.18 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.18 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.17 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.17 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.16 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.16 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.15 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.14 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.12 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.11 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.05 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.01 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.0 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.99 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.99 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.89 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.87 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.84 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.82 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.8 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.77 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.75 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.74 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.73 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.73 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.71 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.71 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.66 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.66 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.64 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.61 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.57 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.54 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.5 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.37 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.35 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.32 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 97.25 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.17 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.14 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.06 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.04 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.03 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.02 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 96.86 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.85 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.7 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.66 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.43 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.22 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.16 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.15 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.01 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.63 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.56 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 95.55 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.42 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.38 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 95.32 | |
| 2qpt_A | 550 | EH domain-containing protein-2; protein-nucleotide | 95.15 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.08 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 95.02 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.02 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 94.89 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 94.55 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 94.48 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 94.37 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 94.08 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 94.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 93.47 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 92.74 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 91.63 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 91.44 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 91.35 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 91.32 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 91.27 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 91.17 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 90.87 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 90.75 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 89.46 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 87.74 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 87.48 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 86.99 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 86.39 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 86.35 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 85.92 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 85.68 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 85.6 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 84.75 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 83.31 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 82.98 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 82.55 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 81.97 | |
| 3q6k_A | 381 | 43.2 kDa salivary protein; beta propeller, binding | 80.25 |
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-41 Score=312.84 Aligned_cols=270 Identities=14% Similarity=0.119 Sum_probs=224.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecC----------------------CCceeEEEecCCCCeEEEecCceEEEE
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------------TPFLYDLVVNNYVANISCILNISILFF 92 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------------~~~~~~~~~~~~~~~i~~~~~~~i~~~ 92 (437)
-.|.+++|+ |++.+|++++ |+++|+|+.. ...+.++.|+++...++++.|+.|++|
T Consensus 31 ~~v~~~~fs-~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lW 108 (344)
T 4gqb_B 31 RQLEAARYR-SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELW 108 (344)
T ss_dssp SEEEEEEEC-TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred CCEEEEEEC-CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEE
Confidence 358999999 9999999888 8889999721 134788999998888899999999999
Q ss_pred Eeeecccc--------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 93 EIIFTQNF--------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 93 ~~~~~~~~--------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
|+..++.. .|...|++++|+| ++.+|++|+.||+|++||+. ..+.+..+.+|.+.|.+++|+|++..+
T Consensus 109 d~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~---~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 109 ELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLA---QQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred eccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 98765432 3677999999999 68999999999999999998 567888999999999999999999877
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEe--ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
|++|+.|++|++||+++++. ...+ ..|...+.+++|+|++..++++|+.||.|++||+++++.
T Consensus 185 l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~-------------- 249 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC-------------- 249 (344)
T ss_dssp EEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--------------
T ss_pred eeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--------------
Confidence 99999999999999998665 4444 345667999999998777899999999999999988643
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc-ccccCCCCccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS-TASESPTPTNS 321 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~s~s~d~~~~ 321 (437)
+..+.+|...|++++|+|++..+|++|+.|++|++||+++++... + ..|...+..++|+|++.. +++++.|++
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~---~~H~~~V~~v~~sp~~~~llas~s~D~~-- 323 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S---QAHRDFVRDATWSPLNHSLLTTVGWDHQ-- 323 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E---CCCSSCEEEEEECSSSTTEEEEEETTSC--
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E---cCCCCCEEEEEEeCCCCeEEEEEcCCCe--
Confidence 455889999999999999986689999999999999999875432 2 236667888899999975 678999999
Q ss_pred ccccccccccccccchhhh
Q psy4571 322 VHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~ 340 (437)
|++|++.+..
T Consensus 324 ---------v~~w~v~~~~ 333 (344)
T 4gqb_B 324 ---------VVHHVVPTEP 333 (344)
T ss_dssp ---------EEEEECCC--
T ss_pred ---------EEEEECCCCC
Confidence 8899987654
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=312.44 Aligned_cols=278 Identities=13% Similarity=0.138 Sum_probs=225.3
Q ss_pred cceeEEEEeeCCCcceEEEeec------cCceEeeec---------------CCCceeEEEecCCCCeEEEecCceEEEE
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVI------NEEYKIWKK---------------NTPFLYDLVVNNYVANISCILNISILFF 92 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~------d~~v~iw~~---------------~~~~~~~~~~~~~~~~i~~~~~~~i~~~ 92 (437)
.-.|.+++|+ |++++|++||. |+.+++|+. +...+.++.|++....++++.+++|++|
T Consensus 42 ~~~V~~v~fS-pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lW 120 (357)
T 4g56_B 42 EVQIGAVRYR-RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELW 120 (357)
T ss_dssp CSEEEEEEEC-SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC
T ss_pred cCCEEEEEEC-CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEe
Confidence 4569999999 99999999998 667888873 2345788999999888899999999999
Q ss_pred Eeeecccc--------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 93 EIIFTQNF--------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 93 ~~~~~~~~--------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
|+..++.. .+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|++..+
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~---~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLS---QKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 97655422 3567899999999 68899999999999999998 567788899999999999999998767
Q ss_pred EEEEeCCCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 165 LATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+++++.||+|++||+++++... .....|...+.+++|+|++..+|++|+.|+.|++||+++++. +
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--------------~ 262 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--------------A 262 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--------------C
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--------------e
Confidence 9999999999999999866422 223457788999999999777899999999999999987643 4
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC-CCCcccccCCCCcccc
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP-TASSTASESPTPTNSV 322 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~~~ 322 (437)
..+.+|...|++++|+|++..+|++|+.|++|++||+++++....+ .|...+..++|+| ++.+|++++.|++
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~~~V~~vafsP~d~~~l~s~s~Dg~--- 335 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHRDFVTGVAWSPLDHSKFTTVGWDHK--- 335 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCSSCEEEEEECSSSTTEEEEEETTSC---
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCCCCEEEEEEeCCCCCEEEEEcCCCe---
Confidence 5578999999999999998768999999999999999988655433 2566778889998 8999999999999
Q ss_pred cccccccccccccchhhhhhhhh
Q psy4571 323 HEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
|++||+.+......+
T Consensus 336 --------v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 336 --------VLHHHLPSEGRTENL 350 (357)
T ss_dssp --------EEEEECC--------
T ss_pred --------EEEEECCCCCccccc
Confidence 899998765444333
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=302.01 Aligned_cols=273 Identities=18% Similarity=0.247 Sum_probs=232.5
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |+++++++|+.|++|++|+..++....... .+..+|.+++
T Consensus 10 ~~h~~~V~~~~fs-p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--------------------------~~~~~v~~~~ 62 (304)
T 2ynn_A 10 SNRSDRVKGIDFH-PTEPWVLTTLYSGRVELWNYETQVEVRSIQ--------------------------VTETPVRAGK 62 (304)
T ss_dssp EEECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------------CCSSCEEEEE
T ss_pred cCCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCceeEEee--------------------------ccCCcEEEEE
Confidence 3445679999999 999999999999999999988765433211 1335688999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++++|++|+.|++|++||+. ..+.+..+.+|.+.|.+++|+|++.. |++|+.||+|++||++++......+.
T Consensus 63 ~~~-~~~~l~s~s~d~~i~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 63 FIA-RKNWIIVGSDDFRIRVFNYN---TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp EEG-GGTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred EeC-CCCEEEEECCCCEEEEEECC---CCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhc
Confidence 999 68899999999999999998 56778889999999999999999995 99999999999999998766567888
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc--CCCeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--NEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~~l~s 268 (437)
+|...|.+++|+|.+..+|++|+.|++|++||++..... .....+|...+..+.|+| +++ ++++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~-~l~s 203 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-------------FTLTTGQERGVNYVDYYPLPDKP-YMIT 203 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS-------------EEEECCCTTCEEEEEECCSTTCC-EEEE
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc-------------ceeccCCcCcEEEEEEEEcCCCC-EEEE
Confidence 999999999999954447999999999999999775432 222446777899999987 556 8899
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.|+.|++||+++++++..+.. |...+..++|+|++.++++|+.|++ |++||..+++..+.+.+|
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg~-----------i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGT-----------LKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSC-----------EEEEETTTCCEEEEECCS
T ss_pred EcCCCeEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEcCCCe-----------EEEEECCCCceeeeccCC
Confidence 99999999999999887776654 5566777899999999999999999 899999999999999999
Q ss_pred CccccccCCCCCCcc
Q psy4571 349 EEESSDRHSSDNDTE 363 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~ 363 (437)
.+.+.++.++|++..
T Consensus 270 ~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 270 LERSWCIATHPTGRK 284 (304)
T ss_dssp SSSEEEEEECTTCGG
T ss_pred CccEEEEEECCCCCc
Confidence 999999998887753
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=300.36 Aligned_cols=271 Identities=16% Similarity=0.266 Sum_probs=228.8
Q ss_pred ccccceeEEEEeeC---CCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 31 SHSIYRFYRLCVAE---PFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 31 ~~~~~~v~~~~~~~---~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
.-+.-.|.+++|++ +++++|+||+.|++||+|+.. ...+..+.+.+....+ +++.|+.|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 44667899999983 246799999999999999843 3446666676666655 677899999999
Q ss_pred eeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 94 IIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 94 ~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
+..++.. ..+..+.+++|+| ++.+|++|+.||.|++||++ ..+....+..|...|.+++|+|++++ |++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~---~~~~~~~~~~~~~~v~~~~~spdg~~-lasg~ 183 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE---SGKKEYSLDTRGKFILSIAYSPDGKY-LASGA 183 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETT---TCSEEEEEECSSSCEEEEEECTTSSE-EEEEE
T ss_pred CCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcC---CCceeEEecCCCceEEEEEECCCCCE-EEEEc
Confidence 8655432 2456789999999 68899999999999999998 45667778889999999999999995 99999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.||.|++||+++++. +..+.+|..+|.+++|+|+++ +|++|+.|+.|++||++... .+..+.+|
T Consensus 184 ~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~--------------~~~~~~~h 247 (321)
T 3ow8_A 184 IDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHAN--------------LAGTLSGH 247 (321)
T ss_dssp TTSCEEEEETTTTEE-EEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCC--------------EEEEECCC
T ss_pred CCCeEEEEECCCCcE-EEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcc--------------eeEEEcCC
Confidence 999999999998655 788899999999999999998 59999999999999998753 34568899
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
...|.+++|+|+++ +|++++.|+.|++||+++++++..+.. +...+..++|+|+|..|++++.|+.
T Consensus 248 ~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~s~~~d~~---------- 313 (321)
T 3ow8_A 248 ASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFD---HQDQVWGVKYNGNGSKIVSVGDDQE---------- 313 (321)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCC----------
T ss_pred CCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcC---CCCcEEEEEECCCCCEEEEEeCCCe----------
Confidence 99999999999999 788999999999999999887776643 5567788899999999999999999
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
|++||..
T Consensus 314 -i~vwd~p 320 (321)
T 3ow8_A 314 -IHIYDCP 320 (321)
T ss_dssp -EEEEECC
T ss_pred -EEEEeCC
Confidence 7888753
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=308.74 Aligned_cols=267 Identities=17% Similarity=0.250 Sum_probs=233.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~ 100 (437)
+.-.|.+++|+ |++.++++|+.|++|++|+. |.+.+..+.|++.+..+ +++.|++|++||+...+..
T Consensus 107 h~~~V~~~~~~-p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 107 HRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred cCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 45679999999 99999999999999999994 44667888888887766 7788999999997654432
Q ss_pred ----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 101 ----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 101 ----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
.+...|.+++|+| ++.+|++|+.|++|++||+. ....+..+.+|...|.+++|+|++. +|++|+.|++|++
T Consensus 186 ~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~v 260 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQ---TGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRV 260 (410)
T ss_dssp ECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred EEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEE
Confidence 3567899999999 68899999999999999998 5677888999999999999999999 5999999999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCC--------------------CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPH--------------------NETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~--------------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
||+++++. ...+.+|...|.+++|+|+ ++ +|++|+.|+.|++||++++
T Consensus 261 wd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~---------- 328 (410)
T 1vyh_C 261 WVVATKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTG---------- 328 (410)
T ss_dssp EETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTT----------
T ss_pred EECCCCce-eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCC----------
Confidence 99998655 7788899999999999996 44 6999999999999999875
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.++..+.+|...|++++|+|+++ +|++|+.|+.|++||+.+++++..+.. |...+..++|+|++.++++|+.
T Consensus 329 ----~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 329 ----MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp ----EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEEEET
T ss_pred ----ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceEEEEcC---CCCcEEEEEEcCCCCEEEEEeC
Confidence 34566889999999999999999 788999999999999999988877754 5567888899999999999999
Q ss_pred CCcccccccccccccccccc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~ 336 (437)
|++ |++||.
T Consensus 401 D~~-----------i~vW~~ 409 (410)
T 1vyh_C 401 DQT-----------VKVWEC 409 (410)
T ss_dssp TSE-----------EEEEC-
T ss_pred CCc-----------EEEEeC
Confidence 999 777775
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=302.36 Aligned_cols=279 Identities=16% Similarity=0.214 Sum_probs=235.6
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|.+++|+ |+++++++|+.|++|++|+..++....... .+...|.++
T Consensus 51 l~gH~~~v~~~~~s-~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--------------------------~~~~~v~~~ 103 (340)
T 1got_B 51 LRGHLAKIYAMHWG-TDSRLLLSASQDGKLIIWDSYTTNKVHAIP--------------------------LRSSWVMTC 103 (340)
T ss_dssp ECCCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE--------------------------CSSSCEEEE
T ss_pred ecCCCCceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCcceEee--------------------------cCCccEEEE
Confidence 33456679999999 999999999999999999987665433221 123567899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
+|+| ++.+|++|+.|+.|++|++.+... ......+.+|.+.|.++.|++++. +++++.|++|++||+++++. +..
T Consensus 104 ~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~-~~~ 179 (340)
T 1got_B 104 AYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQ-TTT 179 (340)
T ss_dssp EECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEE-EEE
T ss_pred EECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcE-EEE
Confidence 9999 688999999999999999985421 234566789999999999999875 89999999999999998665 788
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+.+|.+.|.+++|+|+++ ++++|+.|+.|++||++++. .+..+.+|...|++++|+|+++ ++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~-~l~s 243 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--------------CRQTFTGHESDINAICFFPNGN-AFAT 243 (340)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred EcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--------------eEEEEcCCcCCEEEEEEcCCCC-EEEE
Confidence 899999999999999998 69999999999999998753 3456889999999999999999 8889
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.||.|++||+++++....+.. .....++..++|+|+|+++++|+.|+. +++||+.+++.+..+.+|
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~g~~d~~-----------i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFN-----------CNVWDALKADRAGVLAGH 311 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECTTSSEEEEEETTSE-----------EEEEETTTCCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcc-CCcccceEEEEECCCCCEEEEECCCCe-----------EEEEEcccCcEeeEeecC
Confidence 99999999999998766554432 112235677899999999999999998 899999999999999999
Q ss_pred CccccccCCCCCCcccccc
Q psy4571 349 EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~ 367 (437)
...+.++.++|+|..++++
T Consensus 312 ~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 312 DNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp SSCEEEEEECTTSSCEEEE
T ss_pred CCcEEEEEEcCCCCEEEEE
Confidence 9999999999999887765
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=321.76 Aligned_cols=334 Identities=15% Similarity=0.195 Sum_probs=257.6
Q ss_pred cceeEEecCC------cccccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCe
Q psy4571 20 NAFFTWSALP------LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVAN 80 (437)
Q Consensus 20 ~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~ 80 (437)
..+.+|.... +.-+...|.+++|+ |++++|++|+.|++|++|+.. .+.+..+.|++++..
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~ 117 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEEC-CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCE
Confidence 4555665432 22345679999999 999999999999999999953 345778889999888
Q ss_pred EEEecC-----ceEEEEEeeec--cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE
Q psy4571 81 ISCILN-----ISILFFEIIFT--QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 81 i~~~~~-----~~i~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~ 153 (437)
+.+..+ +.|++||.... ....+...|++++|+|++...|++|+.|++|++||.. ..+....+.+|...|.
T Consensus 118 l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~---~~~~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP---PFKFKSTFGEHTKFVH 194 (611)
T ss_dssp EEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT---TBEEEEEECCCSSCEE
T ss_pred EEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC---CCeEeeeeccccCceE
Confidence 855443 47888884221 1234677899999999655579999999999999987 4566788899999999
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
+++|+|+++ +|++|+.|++|++||+.+++. ...+. +|.+.|.+++|+|+++ .|++|+.|++|++||++++
T Consensus 195 ~v~fspdg~-~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 195 SVRYNPDGS-LFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCC-EEEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCC
Confidence 999999999 499999999999999998665 55553 7999999999999998 5999999999999999876
Q ss_pred CCCCCCCCCC-----------------------------CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 227 GEEQSTEDAE-----------------------------DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 227 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
+......... .........+.+|...|++++|+|+|+ +|++++.|+.|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEE
Confidence 5433221100 001124456779999999999999999 7889999999999
Q ss_pred EeCCCCCCceeee----------------------------eee------------------------------------
Q psy4571 278 YCDSTDSDTKTMR----------------------------LDS------------------------------------ 293 (437)
Q Consensus 278 wd~~~~~~~~~~~----------------------------~~~------------------------------------ 293 (437)
||+.+++....+. ...
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 9998765422210 000
Q ss_pred ---------------cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh--hhhhcCCCccccccC
Q psy4571 294 ---------------IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE--QRQLLGTEEESSDRH 356 (437)
Q Consensus 294 ---------------~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~h~~~~~~~~ 356 (437)
.+...+..++|+|||+++++|+.|++ |++||+.+++. ... .+|...+..+.
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~-----------v~lwd~~~~~~~~~~~-~~h~~~v~~v~ 498 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK-----------VHVYKLSGASVSEVKT-IVHPAEITSVA 498 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE-----------EEEEEEETTEEEEEEE-EECSSCEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCe-----------EEEEEccCCceeeeec-cCCCCceEEEE
Confidence 00112345689999999999999998 89999877643 233 78999999999
Q ss_pred CCCCCcccccc-------ccccCH
Q psy4571 357 SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~~~ 373 (437)
|+|+|..+++. +|+...
T Consensus 499 fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 499 FSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGG
T ss_pred ECCCCCEEEEEcCCCCEEEEEcCC
Confidence 99999988764 788743
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=297.77 Aligned_cols=280 Identities=18% Similarity=0.198 Sum_probs=234.5
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|++++|+ |++.+|+||+.|++|++|+..++....... .+...|.++
T Consensus 60 l~gH~~~V~~~~~s-~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~--------------------------~~~~~v~~~ 112 (354)
T 2pbi_B 60 LKGHGNKVLCMDWC-KDKRRIVSSSQDGKVIVWDSFTTNKEHAVT--------------------------MPCTWVMAC 112 (354)
T ss_dssp EECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------------CSSSCCCEE
T ss_pred ecCCCCeEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCcceEEe--------------------------cCCCCEEEE
Confidence 34456679999999 999999999999999999977655433221 123468899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCC---CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNV---SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
+|+| ++.++++|+.|+.+++|++..... ......+.+|.+.|.+++|+|++.. |++|+.|++|++||+++++. +
T Consensus 113 ~~sp-~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~-~ 189 (354)
T 2pbi_B 113 AYAP-SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQL-L 189 (354)
T ss_dssp EECT-TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE-E
T ss_pred EECC-CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeE-E
Confidence 9999 689999999999999999864321 2345667789999999999999985 99999999999999999665 7
Q ss_pred eEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 HSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+.+|...|.+++|+|+ +. .|++|+.||.|++||++++. .+..+.+|...|++++|+|++.
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~- 253 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQ--------------CVQAFETHESDVNSVRYYPSGD- 253 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSS-
T ss_pred EEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCc--------------EEEEecCCCCCeEEEEEeCCCC-
Confidence 889999999999999885 55 69999999999999998863 3455789999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++++|+.|++|++||++.++....+... ....+...++|+|+|.++++|+.|+. +++||+.+++.+..
T Consensus 254 ~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~d~~-----------i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 254 AFASGSDDATCRLYDLRADREVAIYSKE-SIIFGASSVDFSLSGRLLFAGYNDYT-----------INVWDVLKGSRVSI 321 (354)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSC-----------EEEEETTTCSEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEcCC-CcccceeEEEEeCCCCEEEEEECCCc-----------EEEEECCCCceEEE
Confidence 8999999999999999987655443321 12235567799999999999999998 89999999999999
Q ss_pred hcCCCccccccCCCCCCcccccc
Q psy4571 345 LLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 345 ~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+.+|.+.+.++.++|+|..+++.
T Consensus 322 l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 322 LFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEE
T ss_pred EECCCCcEEEEEECCCCCEEEEE
Confidence 99999999999999999987765
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=299.17 Aligned_cols=278 Identities=17% Similarity=0.152 Sum_probs=222.0
Q ss_pred CCceeEEEecCCCCeEEEecCceEEEEEeeec---------------cccccCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 66 TPFLYDLVVNNYVANISCILNISILFFEIIFT---------------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~---------------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
...+..+.|++++..+....++++++||.... ........|.+++|+| + +.|++|+.||+|+|
T Consensus 30 ~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~s~dg~v~l 107 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVASDSGAVEL 107 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEEETTSEEEE
T ss_pred cCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEEECCCEEEE
Confidence 34578889999999888777888888874311 0112345799999999 3 57889999999999
Q ss_pred EEcCCCCCCCCe-eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEE
Q psy4571 131 WDTRSHNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 131 wd~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 209 (437)
||+.+++..... ....+|.+.|.+++|+|++++ |++|+.|++|++||+++++. +..+.+|.+.|++++|+|++..+|
T Consensus 108 Wd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~-~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 108 WELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVV-LSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSSCTTEE
T ss_pred EeccCCCceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcE-EEEEcCcCCceEEEEecCCCCCce
Confidence 999854322221 234589999999999999995 99999999999999999655 888999999999999999998789
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++|+.|++|++||+++++..... ....|...+.+++|+|++..++++|+.||.|++||+++++++..+
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~------------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQI------------GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEEC------------C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred eeeccccccccccccccceeeee------------ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 99999999999999987543321 123556679999999987668999999999999999999988877
Q ss_pred eeeecccCCceeeeecCCC-CcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc-cc
Q psy4571 290 RLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL-NS 367 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~-~~ 367 (437)
.. +...+..++|+|+| ++|++|+.|++ |++||+.+++.. .+.+|.+.|.++.|+|++..++ ++
T Consensus 254 ~~---h~~~v~~v~fsp~g~~~lasgs~D~~-----------i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 254 AV---HSQCVTGLVFSPHSVPFLASLSEDCS-----------LAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EC---CSSCEEEEEECSSSSCCEEEEETTSC-----------EEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEE
T ss_pred cC---CCCCEEEEEEccCCCeEEEEEeCCCe-----------EEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 64 55677888999998 57899999999 899999988764 5789999999999999987644 32
Q ss_pred -------ccccCHH
Q psy4571 368 -------IWSMTDE 374 (437)
Q Consensus 368 -------~w~~~~~ 374 (437)
+|.+..+
T Consensus 319 s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 319 GWDHQVVHHVVPTE 332 (344)
T ss_dssp ETTSCEEEEECCC-
T ss_pred cCCCeEEEEECCCC
Confidence 7887544
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=291.71 Aligned_cols=295 Identities=18% Similarity=0.284 Sum_probs=229.5
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC--------------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN--------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
...|.+++|+ |++++|++|+.|++|++|+.. .+.+..+.|++.+..+ +++.|+.+++|+.....
T Consensus 16 ~~~v~~l~~s-p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 16 DSRCWFLAWN-PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp TSCEEEEEEC-TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-
T ss_pred CCcEEEEEEC-CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC
Confidence 3478999999 999999999999999999843 3457788888888766 66789999999975432
Q ss_pred ------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 99 ------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 99 ------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
...+...|.+++|+| ++.+|++|+.|++|++||+........+..+.+|...|.+++|+|++.. |++|+.|+
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~ 172 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL-LASASYDD 172 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC-EEEEETTS
T ss_pred eEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE-EEEEeCCC
Confidence 123677899999999 6899999999999999999854433456778899999999999999995 99999999
Q ss_pred eEEEEeCCCCce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC-CCCCCceEEEecC-c
Q psy4571 173 TVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGPPELLFIHGG-H 249 (437)
Q Consensus 173 ~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~-h 249 (437)
+|++||.++.+. +...+.+|...|.+++|+|+++ .|++|+.|++|++||............. ......++..+.+ |
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 251 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH 251 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSC
T ss_pred cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCC
Confidence 999999987542 3567889999999999999998 5999999999999997554332221111 1111234445555 8
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce----eee--eeecccCCceeeeecCCCC-cccccCCCCcccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK----TMR--LDSIRSNGGISSTASPTAS-STASESPTPTNSV 322 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~--~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~ 322 (437)
...|.+++|+|++. .+++++.|+.|++|+...+.... .+. ....|...+..++|+|++. +|++|+.|+.
T Consensus 252 ~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~--- 327 (345)
T 3fm0_A 252 SRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE--- 327 (345)
T ss_dssp SSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC---
T ss_pred CCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc---
Confidence 88999999999999 78899999999999987653221 111 1223556678889999984 8999999999
Q ss_pred cccccccccccccchhhhhhhh
Q psy4571 323 HEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
|++|++.+++....
T Consensus 328 --------v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 328 --------VAFWKYQRPEGLHH 341 (345)
T ss_dssp --------EEEEEECC------
T ss_pred --------EEEEEecCCCCccc
Confidence 89999988776543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=300.61 Aligned_cols=287 Identities=15% Similarity=0.189 Sum_probs=227.4
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeE-EEecCceEEEEEeeec
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANI-SCILNISILFFEIIFT 97 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~ 97 (437)
+.-+...|++++|+ |++++|++|+.|++|++|+..+ ..+..+.+++.+..+ +++.|+.+++|++...
T Consensus 62 l~gH~~~V~~~~~s-p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 62 LQGHSGKVYSLDWT-PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp ECCCSSCEEEEEEC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred ccccccEEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 34456679999999 9999999999999999999544 445666778887777 5567999999997542
Q ss_pred c-----------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-----ccCCCCeEEEEEeCCC
Q psy4571 98 Q-----------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-----DAHTAEVNCLSFNPYS 161 (437)
Q Consensus 98 ~-----------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~h~~~v~~l~~~~~~ 161 (437)
. ...+...+.+++|+|.++..|++|+.|++|++||+.+ .+.+..+ .+|...|.+++|+|.+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT---GQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT---CCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC---CcEEEEeecccCCCCccCeEEEEeecCC
Confidence 1 1235667899999997778899999999999999984 4555544 6799999999998744
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
..+|++|+.|++|++||++....++..+.+|.+.|.+++|+|+++ .|++|+.||+|++||++++...........
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~---- 292 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPD---- 292 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCS----
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEeccccc----
Confidence 346999999999999999865566888999999999999999998 599999999999999998643322110000
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
....+...|++++|+|+|+ ++++|+.||.|++||+.+++....+... ..|...+..++|+|+|.+|++|+.|++
T Consensus 293 ---~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~- 367 (380)
T 3iz6_a 293 ---RNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN- 367 (380)
T ss_dssp ---SSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC-
T ss_pred ---ccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC-
Confidence 0012233589999999999 8889999999999999988776655321 335566778899999999999999999
Q ss_pred cccccccccccccccchhhh
Q psy4571 321 SVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~ 340 (437)
+++||+..++
T Consensus 368 ----------i~iW~~~~~~ 377 (380)
T 3iz6_a 368 ----------LKIWAFSGHR 377 (380)
T ss_dssp ----------EEEEECCSSS
T ss_pred ----------EEEEecCCCc
Confidence 7888886553
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=300.88 Aligned_cols=270 Identities=17% Similarity=0.198 Sum_probs=237.0
Q ss_pred eecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 62 WKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
...|.+.+..+.+++....+ +++.|+.|++||...++.. .+...|.+++|+| ++.+|++|+.||+|++||+.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~-- 180 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ-- 180 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT--
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC--
Confidence 34677889999999987766 7778999999997655432 3667899999999 68899999999999999998
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||++++.. +..+.+|...|.+++++|++. ++++|+.|+
T Consensus 181 -~~~~~~~~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~ 256 (410)
T 1vyh_C 181 -GFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGT-LIASCSNDQ 256 (410)
T ss_dssp -SSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred -CCceeEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECCCCC-EEEEEcCCC
Confidence 56778888999999999999999995 99999999999999999665 788899999999999999998 699999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--------------------CCeEEEEEeCCCeEE
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--------------------EPWVICSVSEDNIMQ 276 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--------------------~~~~l~s~~~dg~i~ 276 (437)
.|++||+++.. ....+.+|...|.+++|+|+ +. ++++|+.|+.|+
T Consensus 257 ~v~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~ 321 (410)
T 1vyh_C 257 TVRVWVVATKE--------------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIK 321 (410)
T ss_dssp CEEEEETTTCC--------------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEE
T ss_pred eEEEEECCCCc--------------eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEE
Confidence 99999998753 34557899999999999996 45 789999999999
Q ss_pred EEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccC
Q psy4571 277 EYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRH 356 (437)
Q Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~ 356 (437)
+||++++.++..+.. +...+..++|+|+|.++++|+.|+. |++||+.+++.+..+.+|...+.++.
T Consensus 322 iwd~~~~~~~~~~~~---h~~~v~~v~~~~~g~~l~s~s~D~~-----------i~vwd~~~~~~~~~~~~h~~~v~~l~ 387 (410)
T 1vyh_C 322 MWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKT-----------LRVWDYKNKRCMKTLNAHEHFVTSLD 387 (410)
T ss_dssp EEETTTTEEEEEEEC---CSSCEEEEEECSSSSCEEEEETTTE-----------EEEECCTTSCCCEEEECCSSCEEEEE
T ss_pred EEECCCCceEEEEEC---CCCcEEEEEEcCCCCEEEEEeCCCe-----------EEEEECCCCceEEEEcCCCCcEEEEE
Confidence 999999887766653 4556778899999999999999998 89999999999999999999999999
Q ss_pred CCCCCcccccc
Q psy4571 357 SSDNDTEDLNS 367 (437)
Q Consensus 357 ~~~~~~~~~~~ 367 (437)
++|++..++++
T Consensus 388 ~~~~~~~l~sg 398 (410)
T 1vyh_C 388 FHKTAPYVVTG 398 (410)
T ss_dssp ECSSSSCEEEE
T ss_pred EcCCCCEEEEE
Confidence 99999877764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=309.22 Aligned_cols=293 Identities=19% Similarity=0.321 Sum_probs=251.9
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc--
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN-- 99 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~-- 99 (437)
+...|.+++|+ |++..+++++.|+.+++|+. |.+.+..+.+++....+ ++..|+.|++|+......
T Consensus 261 ~~~~v~~v~~~-~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~ 339 (577)
T 2ymu_A 261 HSSSVNGVAFR-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT 339 (577)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE
T ss_pred CCCCEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE
Confidence 45678999999 99999999999999999994 34567788888887766 677899999999653322
Q ss_pred -cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 100 -FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 100 -~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
..+...+.+++|+| ++.+|++|+.||.|++||.. .+.+..+.+|...|.+++|+|++++ |++++.|+.|++||
T Consensus 340 ~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~----~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWN 413 (577)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT----CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEEC
T ss_pred EeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCC----CCEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEe
Confidence 23567899999999 68899999999999999964 4677888899999999999999996 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
... +. +..+.+|...|++++|+|+++ .|++++.|+.|++||... +.+..+.+|...|++++|
T Consensus 414 ~~~-~~-~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~---------------~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 414 RNG-QL-LQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG---------------QLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp TTC-CE-EEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS---------------CEEEEEECCSSCEEEEEE
T ss_pred CCC-CE-EEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC---------------CEEEEEcCCCCCEEEEEE
Confidence 653 43 778889999999999999998 599999999999999643 345667899999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++ +|++++.|+.|++||. ++++.+.+.. +...+..++|+|+|++|++++.|+. |++||. +
T Consensus 476 spd~~-~las~~~d~~i~iw~~-~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~-----------v~lwd~-~ 538 (577)
T 2ymu_A 476 SPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKT-----------VKLWNR-N 538 (577)
T ss_dssp CTTSC-EEEEEETTSEEEEEET-TSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSE-----------EEEECT-T
T ss_pred cCCCC-EEEEEeCCCEEEEEcC-CCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCE-----------EEEEeC-C
Confidence 99999 8899999999999995 5666665543 5567788899999999999999998 899995 7
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++.+..+.+|.+.+..+.|+|+|+.+++.
T Consensus 539 ~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 539 GQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 88889999999999999999999987764
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=290.32 Aligned_cols=272 Identities=17% Similarity=0.244 Sum_probs=235.1
Q ss_pred EeeecCCCceeEEEecCCC----C-eEEEecCceEEEEEeeeccc------cccCCCcceEEeeCCCCCEEEEEECCCcE
Q psy4571 60 KIWKKNTPFLYDLVVNNYV----A-NISCILNISILFFEIIFTQN------FPFPLSRQDVAWHLLHESLFGSVADDQKL 128 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~----~-~i~~~~~~~i~~~~~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v 128 (437)
+....|.+.+..+.|.+.. . .++++.|++|++|++..... ..+...|.+++|+| ++.++++++.|++|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHI 104 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcE
Confidence 4455788999999997642 2 44888999999999764321 23677899999999 68899999999999
Q ss_pred EEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcE
Q psy4571 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 208 (437)
Q Consensus 129 ~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 208 (437)
++||+. ..+.+..+..|...+.+++|+|++++ |++|+.||.|++||+++++. ...+..|...|.+++|+|+++ +
T Consensus 105 ~lWd~~---~~~~~~~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~~spdg~-~ 178 (321)
T 3ow8_A 105 RLWDLE---NGKQIKSIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGK-Y 178 (321)
T ss_dssp EEEETT---TTEEEEEEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEEECTTSS-E
T ss_pred EEEECC---CCCEEEEEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCce-eEEecCCCceEEEEEECCCCC-E
Confidence 999998 55677888889999999999999995 99999999999999998665 677888999999999999998 5
Q ss_pred EEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee
Q psy4571 209 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288 (437)
Q Consensus 209 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 288 (437)
|++|+.||.|++||++++ +.+..+.+|...|.+++|+|+++ +|++|+.|+.|++||+++++....
T Consensus 179 lasg~~dg~i~iwd~~~~--------------~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATG--------------KLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp EEEEETTSCEEEEETTTT--------------EEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEEEcCCCeEEEEECCCC--------------cEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcceeEE
Confidence 999999999999999875 44566889999999999999999 889999999999999998877665
Q ss_pred eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 289 MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 289 ~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+.. +...+..++|+|++.++++++.|++ +++||+.+++.+..+.+|.+.+..+.++|++..+++.
T Consensus 244 ~~~---h~~~v~~~~~sp~~~~l~s~s~D~~-----------v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 244 LSG---HASWVLNVAFCPDDTHFVSSSSDKS-----------VKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp ECC---CSSCEEEEEECTTSSEEEEEETTSC-----------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EcC---CCCceEEEEECCCCCEEEEEeCCCc-----------EEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 543 4566778899999999999999999 8999999999999999999999999999999877664
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=294.25 Aligned_cols=297 Identities=18% Similarity=0.166 Sum_probs=221.5
Q ss_pred cceEEEeeccCceEeeec-------CCCceeEEEecCCCCeEEEec-------CceEEEEEeeecc--------ccccCC
Q psy4571 47 DDAVEERVINEEYKIWKK-------NTPFLYDLVVNNYVANISCIL-------NISILFFEIIFTQ--------NFPFPL 104 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~-------~~~~~~~~~~~~~~~~i~~~~-------~~~i~~~~~~~~~--------~~~~~~ 104 (437)
.++++.++.+...+.|+. |.+.+..+.|++++..+.... |+.+++|+...+. ...+..
T Consensus 16 ~~~~~~~~g~~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~ 95 (357)
T 4g56_B 16 ENLYFQSNGSSKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA 95 (357)
T ss_dssp ------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS
T ss_pred cceEEecCCCccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC
Confidence 345556666777888983 567799999999999885543 6778888754332 123567
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC-CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
.|.+++|+| ++ .+++++.||+|++||+.+++... ......+|.+.|.+++|+|++.+ |++|+.|++|++||+++++
T Consensus 96 ~V~~~~~s~-d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 96 GVTDVAWVS-EK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp CEEEEEEET-TT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTE
T ss_pred CEEEEEEcC-CC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCc
Confidence 899999999 44 46678899999999998543222 22344589999999999999995 9999999999999999965
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. +..+.+|...|++++|+|+++.++++++.|+.|++||+++++.... .....|...+.+++|+|++.
T Consensus 173 ~-~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~------------~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 173 V-LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR------------IDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp E-EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB------------CCCTTCCSCEEEEEECTTST
T ss_pred E-EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee------------eeeccccccccchhhhhccc
Confidence 5 8889999999999999999876789999999999999988765443 12456778899999999977
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC-CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.++++|+.|+.|++||++++++.+.+.. +...+..++|+|++ ++|++|+.|++ |++||+.+++.+
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~lasgs~D~~-----------i~iwd~~~~~~~ 305 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAV---HSQNITGLAYSYHSSPFLASISEDCT-----------VAVLDADFSEVF 305 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECC---CSSCEEEEEECSSSSCCEEEEETTSC-----------EEEECTTSCEEE
T ss_pred ceEEEeecccceeEEECCCCcEeEEEec---cceeEEEEEEcCCCCCEEEEEeCCCE-----------EEEEECCCCcEe
Confidence 6899999999999999999988777654 45667788999998 57899999998 899999999876
Q ss_pred hhhcCCCccccccCCCC-CCcccccc-------ccccCHH
Q psy4571 343 RQLLGTEEESSDRHSSD-NDTEDLNS-------IWSMTDE 374 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~-~~~~~~~~-------~w~~~~~ 374 (437)
+. .+|.+.|.+++|+| ++..+++. +|++..+
T Consensus 306 ~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 RD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 54 48999999999998 67776654 8988543
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=281.56 Aligned_cols=276 Identities=21% Similarity=0.283 Sum_probs=230.9
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |+++++++|+.|+.+++|+..++...... ..+...|.+++
T Consensus 20 ~gh~~~v~~~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--------------------------~~h~~~v~~~~ 72 (312)
T 4ery_A 20 AGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTI--------------------------SGHKLGISDVA 72 (312)
T ss_dssp CCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------CCCSSCEEEEE
T ss_pred cccCCcEEEEEEC-CCCCEEEEeeCCCeEEEEeCCCcccchhh--------------------------ccCCCceEEEE
Confidence 4456689999999 99999999999999999998766543321 12346788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++++|++|+.||.|++||++ ..+.+..+.+|...|.+++|+|++.. |++|+.||.|++||+++++. +..+.
T Consensus 73 ~~~-~~~~l~s~~~d~~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~-~~~~~ 146 (312)
T 4ery_A 73 WSS-DSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKC-LKTLP 146 (312)
T ss_dssp ECT-TSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCE-EEEEC
T ss_pred EcC-CCCEEEEECCCCEEEEEECC---CCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEE-EEEec
Confidence 999 68899999999999999998 56778888999999999999999995 99999999999999998665 77888
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
.|..+|.+++|+|+++ ++++|+.||.|++||++++.... .....+...+..++|+|+++ ++++++
T Consensus 147 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-~l~~~~ 211 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLK-------------TLIDDDNPPVSFVKFSPNGK-YILAAT 211 (312)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEE-------------EECCSSCCCEEEEEECTTSS-EEEEEE
T ss_pred CCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceee-------------EEeccCCCceEEEEECCCCC-EEEEEc
Confidence 9999999999999998 58999999999999998764322 12345667899999999999 788999
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.|+.|++||+++++....+....... ......+ .+++.++++|+.|+. |++||+.+++.+..+.+|.
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~sg~~dg~-----------i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEK-YCIFANFSVTGGKWIVSGSEDNL-----------VYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSS-SCCCEEEECSSSCEEEECCTTSC-----------EEEEETTTCCEEEEECCCS
T ss_pred CCCeEEEEECCCCcEEEEEEecCCce-EEEEEEEEeCCCcEEEEECCCCE-----------EEEEECCCchhhhhhhccC
Confidence 99999999999987766665322111 1222333 478889999999998 8999999999999999999
Q ss_pred ccccccCCCCCCccccc
Q psy4571 350 EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 350 ~~~~~~~~~~~~~~~~~ 366 (437)
+.+..+.++|++..+++
T Consensus 280 ~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 280 DVVISTACHPTENIIAS 296 (312)
T ss_dssp SCEEEEEECSSSSEEEE
T ss_pred CcEEEEeecCcCCceEE
Confidence 99999999999987664
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=278.93 Aligned_cols=276 Identities=13% Similarity=0.236 Sum_probs=223.7
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeec----------------CCCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------------NTPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------------~~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
.+.-+.-.|.+++|++..+++|++|+.|++|++|+. |...+..+.+++....+ +++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345566789999999334589999999999999973 45667788888888766 7788999999
Q ss_pred EEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC-----
Q psy4571 92 FEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE----- 162 (437)
Q Consensus 92 ~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~----- 162 (437)
||+..++.. .+...|.+++|+| ++.+|++|+.||+|++||++ ...+..+.+|...|.+++|+|.+.
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK----GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECCC------C
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC----CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 998765432 3678999999999 68899999999999999997 356778889999999999998532
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
..+++++.|+.|++||+++.+. ...+.+|...|.+++|+|+++ +|++|+.||.|++||+++.+ .
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~--------------~ 230 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQI-EADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK--------------A 230 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEE-EEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE--------------E
T ss_pred cEEEEEeCCCEEEEEECCcchh-heeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--------------E
Confidence 2599999999999999998554 777889999999999999998 59999999999999998753 3
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-----ecccCCceeeeecCCCCcccccCCC
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-----SIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+..+.. ...|.+++|+|++. ++++++. +.+++|+++.+.....+... ..+...+..++|+|||++|++|+.|
T Consensus 231 ~~~~~~-~~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 231 MYTLSA-QDEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp EEEEEC-CSCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEecC-CCcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 344544 45899999999998 6766654 56999999876554444321 1123345678999999999999999
Q ss_pred Ccccccccccccccccccchhh
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+. |++||+.++
T Consensus 308 g~-----------i~vWd~~t~ 318 (319)
T 3frx_A 308 NV-----------IRVWQVMTA 318 (319)
T ss_dssp SC-----------EEEEEEEEC
T ss_pred ce-----------EEEEEEeec
Confidence 99 899998765
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=307.43 Aligned_cols=318 Identities=16% Similarity=0.229 Sum_probs=252.2
Q ss_pred EEecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 24 TWSALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
+|-..|.. ..-.+.+++|+ |++++|++++ ++.+++|+. |...+..+.++|++..+ ++..|++|++
T Consensus 9 ~~~~~~~~-~~g~~~~~~~s-pdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~l 85 (611)
T 1nr0_A 9 LFPSLPRT-ARGTAVVLGNT-PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRI 85 (611)
T ss_dssp EECCCCCC-CTTCCCCCEEC-TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCCCCc-ccCceeEEeeC-CCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEE
Confidence 34434433 34567789999 9999999998 569999994 34668888999998877 6678999999
Q ss_pred EEeeeccc------cccCCCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 92 FEIIFTQN------FPFPLSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 92 ~~~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
||+...+. ..+...|.+++|+| ++..|++++.+ +.|++||.. .....+.+|...|.+++|+|++
T Consensus 86 Wd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~~-----~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 86 WDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG-----TSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTC-----CBCBCCCCCSSCEEEEEECSSS
T ss_pred eECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEEEeeCC-----CCcceecCCCCCceEEEECCCC
Confidence 99753221 23567999999999 67788888765 478888743 3456778999999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
.+.|++|+.|++|++||..+.+. ...+.+|...|.+++|+|+++ +|++|+.|++|++||+.+++........
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~~~~~~~~------ 231 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDD------ 231 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCT------
T ss_pred CeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcEeeeeccc------
Confidence 86699999999999999988544 778899999999999999998 5999999999999999876543221000
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.....+|.+.|.+++|+|+++ +|++++.|++|++||++++++...+............+.+ ++..+++++.++.
T Consensus 232 -~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~-- 305 (611)
T 1nr0_A 232 -SLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGF-- 305 (611)
T ss_dssp -TSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCC--
T ss_pred -cccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCc--
Confidence 000127999999999999999 7899999999999999998877776543222222333344 7889999999998
Q ss_pred ccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+++||..+++....+.+|...+.++.++|+|..+++. +|++..
T Consensus 306 ---------i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 306 ---------INFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp ---------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ---------EEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 8999999988888889999999999999999887764 888754
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=295.73 Aligned_cols=308 Identities=16% Similarity=0.196 Sum_probs=245.7
Q ss_pred ceeEEEEeeCCCcc-eEEEe----------eccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceE
Q psy4571 35 YRFYRLCVAEPFDD-AVEER----------VINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISI 89 (437)
Q Consensus 35 ~~v~~~~~~~~~~~-~l~tg----------s~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i 89 (437)
..|.+++|+ |++. ++++| +.|+.|++|+.. .+.+..+.|++....+ ++..|+.|
T Consensus 13 ~~v~~~~~s-p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWS-HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBC-SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeC-CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeE
Confidence 467889999 8876 99999 899999999954 3457788898888777 55678999
Q ss_pred EEEEeee----cc----ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC------CCCCeeeeccCCCCeEEE
Q psy4571 90 LFFEIIF----TQ----NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN------VSKPSHTVDAHTAEVNCL 155 (437)
Q Consensus 90 ~~~~~~~----~~----~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~~~~h~~~v~~l 155 (437)
++|++.. .. ...+...|.+++|+|+++.+|++++.||.|++||+.+.. ..........|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999865 11 123677999999999658899999999999999998653 112233446799999999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC------CCceEEEEEcCCCCcEEEEEeCCC---eEEEEEcCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH------KDEIFQVQWSPHNETILASSGTDR---RLHVWDLSKI 226 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~sg~~dg---~i~vwd~~~~ 226 (437)
+|+|++..+|++++.||.|++||+++++. +..+..| ...|.+++|+|++..++++++.|+ .|++||+++.
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 99999555799999999999999998655 6666655 788999999999866799999998 9999999986
Q ss_pred CCCCCCCCCCCCCCceEEEec-CccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee
Q psy4571 227 GEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA 304 (437)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (437)
.... ..+. +|...|.+++|+| +++ ++++++.|+.|++||+++++++..+.. +...+..++|
T Consensus 251 ~~~~-------------~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~ 313 (416)
T 2pm9_A 251 NTPL-------------QTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKF 313 (416)
T ss_dssp TSCS-------------BCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEE
T ss_pred CCCc-------------EEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEE
Confidence 3221 2255 8999999999999 777 788999999999999999887776653 4566778899
Q ss_pred cCCC-CcccccCCCCcccccccccccccccccchhhhhhhhhc-----------------------------------CC
Q psy4571 305 SPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-----------------------------------GT 348 (437)
Q Consensus 305 s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-----------------------------------~h 348 (437)
+|++ .++++++.|+. +++||+.+++...... .|
T Consensus 314 s~~~~~~l~s~~~d~~-----------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (416)
T 2pm9_A 314 APEAPDLFACASFDNK-----------IEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWY 382 (416)
T ss_dssp CTTCTTEEEECCSSSE-----------EEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTT
T ss_pred CCCCCCEEEEEecCCc-----------EEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccc
Confidence 9999 89999999999 6777776655432221 15
Q ss_pred CccccccCCCCCCcccccc-------ccccC
Q psy4571 349 EEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
..++..+.|+|+|..++.. +|++.
T Consensus 383 ~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 383 GEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 6667788899999877764 77764
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=293.60 Aligned_cols=288 Identities=17% Similarity=0.194 Sum_probs=237.5
Q ss_pred eEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
.+.+..|.+.+..+.|++....+ +++.|++|++||....+.. .+...|.+++|+| ++.+|++|+.|+.+++||+
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEEC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEEC
Confidence 45677899999999999988766 7888999999997654432 3567899999999 6899999999999999999
Q ss_pred CCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe-----ccCCCceEEEEEcCC
Q psy4571 134 RSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF-----ESHKDEIFQVQWSPH 204 (437)
Q Consensus 134 ~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-----~~h~~~v~~v~~~p~ 204 (437)
.... .......+.+|.+.|.++.|+|++...|++|+.|++|++||+++++. +..+ .+|...|.+++|+|.
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR-ISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE-EEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE-EEEeecccCCCCccCeEEEEeecC
Confidence 7421 22345667899999999999998665699999999999999998665 5554 578999999999884
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 205 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+..+|++|+.|+.|++||++... ..+..+.+|...|.+++|+|+++ +|++|+.||+|++||+++++
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITS-------------RAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTC-------------CCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE
T ss_pred CCCEEEEEECCCeEEEEECCCCC-------------cceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc
Confidence 43479999999999999998532 23455789999999999999999 78999999999999999988
Q ss_pred Cceeeeeeecc----cCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh----cCCCccccccC
Q psy4571 285 DTKTMRLDSIR----SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL----LGTEEESSDRH 356 (437)
Q Consensus 285 ~~~~~~~~~~~----~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~----~~h~~~~~~~~ 356 (437)
++..+...... ...+..++|+|+|.++++|+.|+. +++||..+++.+..+ .+|...+.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-----------i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-----------CYVWDTLLAEMVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-----------EEEEETTTCCEEEEECCSCSSCCCCCCEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-----------EEEEECCCCceEEEEecccCCCCCceEEEE
Confidence 77666532211 123567799999999999999998 899999988877666 78999999999
Q ss_pred CCCCCcccccc-------ccccCH
Q psy4571 357 SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~~~ 373 (437)
++|+|..++++ +|++.+
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCC
Confidence 99999988775 787754
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=279.58 Aligned_cols=283 Identities=12% Similarity=0.158 Sum_probs=212.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecC---------------CCceeEEEecCCCCeE-EEecCceEEEEEe
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN---------------TPFLYDLVVNNYVANI-SCILNISILFFEI 94 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~---------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~ 94 (437)
.-+.-.|.+++|+ |+ +|++|+.|++|++|+.. .+.+..+.|++....+ +++.|+.|++|+.
T Consensus 11 ~~h~~~v~~~~~s-~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 11 KLYKEKIWSFDFS-QG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp ECCSSCEEEEEEE-TT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ccCCCceeeeccC-CC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 3455678999999 65 99999999999999843 3457778888887766 6678999999997
Q ss_pred eecc-----------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCC
Q psy4571 95 IFTQ-----------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 95 ~~~~-----------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
.... ...+...|.+++|+| ++.+|++|+.|++|++||+... ...+.+..+.+|...|.+++|+|++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 4211 123667899999999 6889999999999999999532 23345677889999999999999998
Q ss_pred cEEEEEeCCCeEEEEeCCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+|++|+.|++|++||..++. .++..+.+|.+.|.+++|+|+ +. .|++|+.|++|++||++....... ..
T Consensus 167 -~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~------~~ 238 (330)
T 2hes_X 167 -LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMGDDEDDQ------QE 238 (330)
T ss_dssp -EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEEECTTSC------EE
T ss_pred -EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecCCCcccc------ce
Confidence 49999999999999987643 457788999999999999998 54 589999999999999976432111 00
Q ss_pred CceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC-CceeeeecC--CCCcccccC
Q psy4571 240 PELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN-GGISSTASP--TASSTASES 315 (437)
Q Consensus 240 ~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~s~--~g~~l~s~s 315 (437)
......+.+ |...|.+++|++++ ++++++.||.|++||..+++..........+.. .+..++|+| ++.+|++|+
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 122333444 89999999999765 588999999999999987632111111122333 566779999 799999999
Q ss_pred CCCcccccccccccccccccchh
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
.|++ |++||+..
T Consensus 317 ~Dg~-----------v~~W~~~~ 328 (330)
T 2hes_X 317 DDGI-----------VNFWSLEK 328 (330)
T ss_dssp TTSE-----------EEEEEC--
T ss_pred CCCc-----------EEEEEecc
Confidence 9999 78888754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-37 Score=297.20 Aligned_cols=301 Identities=15% Similarity=0.159 Sum_probs=230.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
..+|++++|++.++.+|++|+.||+|++|+..++...... ....|...|++++|+|
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~------------------------~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI------------------------KGIGAGGSITGLKFNP 174 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE------------------------CCCSSSCCCCEEEECS
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE------------------------EccCCCCCEEEEEEeC
Confidence 3459999999336789999999999999998765433221 1123567899999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
.++.+|++|+.||+|++||++... ...+.....+...+.+++|+|++. +|++|+.||.|++||++. +. +..+.+|.
T Consensus 175 ~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~-~~-~~~~~~h~ 250 (435)
T 4e54_B 175 LNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG-KE-LWNLRMHK 250 (435)
T ss_dssp SCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS-CB-CCCSBCCS
T ss_pred CCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc-ce-eEEEeccc
Confidence 778999999999999999997321 111222223445688999999999 599999999999999985 33 67788999
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..|++++|+|+++.++++|+.|+.|++||++....... +....+|...|++++|+|+|. +|++++.||
T Consensus 251 ~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~-----------~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~ 318 (435)
T 4e54_B 251 KKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS-----------FLYSLPHRHPVNAACFSPDGA-RLLTTDQKS 318 (435)
T ss_dssp SCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC-----------CSBCCBCSSCEEECCBCTTSS-EEEEEESSS
T ss_pred ceEEeeeecCCCceEEEEecCcceeeEEecccccccce-----------EEEeeeccccccceeECCCCC-eeEEEcCCC
Confidence 99999999999988899999999999999988654433 122457999999999999999 788999999
Q ss_pred eEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhhhhhhc-CC
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-GT 348 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~h 348 (437)
.|++||+.++.....+..... .........|+|++..++++. .++...++.....+.|++||..+|+.+..+. +|
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~ 398 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398 (435)
T ss_dssp CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence 999999999877665543221 112344557888888777664 4555555555555569999999999888764 67
Q ss_pred Ccccccc-CCCCCCcccccc------ccccCHH
Q psy4571 349 EEESSDR-HSSDNDTEDLNS------IWSMTDE 374 (437)
Q Consensus 349 ~~~~~~~-~~~~~~~~~~~~------~w~~~~~ 374 (437)
...+..+ .|+|+|..++++ +|++...
T Consensus 399 ~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~g 431 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLASAMGYHILIWSQQEA 431 (435)
T ss_dssp CCCCCCEEEECTTSSCEEEECSSEEEECCCC--
T ss_pred CCcEEEEEEECCCCCEEEEEcCCcEEEEECCcC
Confidence 7777776 589999887764 8988554
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=276.33 Aligned_cols=278 Identities=14% Similarity=0.235 Sum_probs=216.1
Q ss_pred cccccceeEEEEe-----eCCCcceEEEeeccCceEeeecC------------------CCceeEEEecCCCCeE-EEec
Q psy4571 30 LSHSIYRFYRLCV-----AEPFDDAVEERVINEEYKIWKKN------------------TPFLYDLVVNNYVANI-SCIL 85 (437)
Q Consensus 30 ~~~~~~~v~~~~~-----~~~~~~~l~tgs~d~~v~iw~~~------------------~~~~~~~~~~~~~~~i-~~~~ 85 (437)
+.-+...|.+++| +++++.+|++|+.|++|++|+.. ...+..+.+++....+ +++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 3445667999999 63489999999999999999853 3456778888877765 7788
Q ss_pred CceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 86 NISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 86 ~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
|++|++||+..++.. .+...|.+++|+| ++.+|++|+.|++|++||+... .........+|...|.+++|+|++
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecccc
Confidence 999999998755432 3678999999999 6889999999999999999721 111111123788999999999987
Q ss_pred ----------CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 162 ----------EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 162 ----------~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
. +|++++.||.|++||.. ......+.+|...|.+++|+|+++ .|++|+.||.|++||+.......
T Consensus 175 ~~~~~~~~~~~-~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~- 249 (343)
T 2xzm_R 175 KSANKVQPFAP-YFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQ- 249 (343)
T ss_dssp CSCSCCCSSCC-EEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCS-
T ss_pred ccccccCCCCC-EEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccc-
Confidence 5 59999999999999954 333667889999999999999998 59999999999999995433211
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee----------ecccCCcee
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD----------SIRSNGGIS 301 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~ 301 (437)
..+ .+...|.+++|+|+++ +++ ++.|+.|++||+.+++........ ..+...+..
T Consensus 250 ------------~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 314 (343)
T 2xzm_R 250 ------------REF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTS 314 (343)
T ss_dssp ------------EEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEE
T ss_pred ------------eee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEE
Confidence 112 2345799999999998 554 556888999999987765522221 123345667
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
++|+|+|.+|++|+.|+. |++||+.+|+
T Consensus 315 ~~~sp~g~~l~sg~~Dg~-----------v~~w~~~~g~ 342 (343)
T 2xzm_R 315 LAWNALGKKLFAGFTDGV-----------IRTFSFETSA 342 (343)
T ss_dssp EEECSSSCCEEEEETTSE-----------EEEEEEEEEE
T ss_pred EEECCCCCeEEEecCCce-----------EEEEEEEccC
Confidence 899999999999999999 8999987764
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=281.35 Aligned_cols=238 Identities=15% Similarity=0.197 Sum_probs=204.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|+| ++.+|++|+.||+|++||+. ....+..+..|..+|.+++|+|++.. |++|+.|++|++||+++
T Consensus 12 h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYE---TQVEVRSIQVTETPVRAGKFIARKNW-IIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEEEGGGTE-EEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCcEEEEECC---CCceeEEeeccCCcEEEEEEeCCCCE-EEEECCCCEEEEEECCC
Confidence 567899999999 68899999999999999998 55677888899999999999999995 99999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++|+|+++ +|++|+.|++|++||+++.. .....+.+|...|.+++|+|.
T Consensus 87 ~~~-~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 87 GEK-VVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp CCE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEECTT
T ss_pred CcE-EEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCc-------------chhhhhcccCCcEEEEEECCC
Confidence 665 788899999999999999998 59999999999999997642 334567899999999999995
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC--CCCcccccCCCCcccccccccccccccccchhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP--TASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+..++++|+.|+.|++||++++.....+.. .+...+..+.++| ++.++++|+.|++ |++||+.++
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~~-----------i~iWd~~~~ 218 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLT-----------IKIWDYQTK 218 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETTSE-----------EEEEETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCCCe-----------EEEEeCCCC
Confidence 444899999999999999988776655542 2334455566665 7889999999999 899999999
Q ss_pred hhhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 340 EEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 340 ~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+.+..+.+|...+..+.++|++..+++. +|+..
T Consensus 219 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999999999866654 67764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=296.34 Aligned_cols=299 Identities=20% Similarity=0.323 Sum_probs=252.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC----------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc---
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ--- 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~--- 98 (437)
+...|.+++|+ |++..+++++.|+.+++|+.. ...+..+.+.+....+ ++..++.+++|+.....
T Consensus 220 ~~~~v~~~~~s-~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~ 298 (577)
T 2ymu_A 220 HSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQT 298 (577)
T ss_dssp CSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE
T ss_pred CCCCEEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEE
Confidence 35568999999 999999999999999999943 4556777888887766 66788999999953221
Q ss_pred ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 99 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
...+...|.+++|+| ++..|++++.||.|++||.. ...+..+.+|...|.+++|+|++.. |++|+.||.|++||
T Consensus 299 ~~~h~~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~----~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN----GQHLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWN 372 (577)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEE
T ss_pred EecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCC----CCeeEEEeCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEc
Confidence 123567899999999 68899999999999999986 3556778899999999999999995 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
... +. +..+.+|...|.+++|+|++++ |++++.|+.|++||... +.+..+.+|...|++++|
T Consensus 373 ~~~-~~-~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~---------------~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 373 RNG-QL-LQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG---------------QLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp TTC-CE-EEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC---------------CEEEEEECCSSCEEEEEE
T ss_pred CCC-CE-EEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC---------------CEEEEecCCCCCeEEEEE
Confidence 653 43 7788899999999999999985 89999999999999643 345668899999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++ ++++++.|+.|++||.. ++....+. .+...+..++|+|+|+++++++.|+. |++||. +
T Consensus 435 s~d~~-~l~~~~~d~~v~~w~~~-~~~~~~~~---~~~~~v~~~~~spd~~~las~~~d~~-----------i~iw~~-~ 497 (577)
T 2ymu_A 435 SPDDQ-TIASASDDKTVKLWNRN-GQLLQTLT---GHSSSVRGVAFSPDGQTIASASDDKT-----------VKLWNR-N 497 (577)
T ss_dssp CTTSS-EEEEEETTSEEEEEETT-SCEEEEEE---CCSSCEEEEEECTTSCEEEEEETTSE-----------EEEEET-T
T ss_pred CCCCC-EEEEEcCCCEEEEEECC-CCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCE-----------EEEEcC-C
Confidence 99999 78899999999999974 44444443 25566778899999999999999998 899994 7
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
++.++.+.+|...+..+.++|+|..+++. +|+.++
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 88889999999999999999999987764 888654
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=277.35 Aligned_cols=288 Identities=16% Similarity=0.212 Sum_probs=226.8
Q ss_pred eeecCCC-ceeEEEecCCCCeE-EEecCceEEEEEeeecc-------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEE
Q psy4571 61 IWKKNTP-FLYDLVVNNYVANI-SCILNISILFFEIIFTQ-------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIW 131 (437)
Q Consensus 61 iw~~~~~-~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~-------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vw 131 (437)
....|.+ .+..+.|++.+..+ +++.|+.|++||..... ...+...|.+++|+| ++.+|++|+.|++|++|
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIW 88 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEE
Confidence 3445655 88899999998877 67789999999976542 124677899999999 68899999999999999
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--eeeeEeccCCCceEEEEEcCCCCcEE
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l 209 (437)
|.... ....+..+.+|...|.+++|+|++.. |++|+.|++|++||+++.. .++..+.+|...|.+++|+|+++ +|
T Consensus 89 ~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l 165 (345)
T 3fm0_A 89 KKNQD-DFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LL 165 (345)
T ss_dssp EECCC--EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS-CE
T ss_pred EccCC-CeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC-EE
Confidence 98743 12456788899999999999999995 9999999999999998754 23566788999999999999998 49
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee-
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT- 288 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~- 288 (437)
++|+.|+.|++||.+.... .....+.+|...|.+++|+|+++ +|++++.|++|++||.........
T Consensus 166 ~s~s~d~~i~~w~~~~~~~------------~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDW------------VCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEETTSCEEEEEEETTEE------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEEeCCCcEEEEEecCCCE------------EEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccc
Confidence 9999999999999876421 23456889999999999999999 789999999999999743322111
Q ss_pred -----------e-eeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh---------hhhcC
Q psy4571 289 -----------M-RLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ---------RQLLG 347 (437)
Q Consensus 289 -----------~-~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~---------~~~~~ 347 (437)
+ .....+...+..++|+|++..+++++.|+. +++||...+... ....+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-----------i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-----------IRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-----------EEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-----------EEEEEeCCCCCcceeeEEEEeeeccc
Confidence 1 111224456777899999999999999998 788877655321 22468
Q ss_pred CCccccccCCCCCCc-ccccc-------ccccCHHHH
Q psy4571 348 TEEESSDRHSSDNDT-EDLNS-------IWSMTDEQR 376 (437)
Q Consensus 348 h~~~~~~~~~~~~~~-~~~~~-------~w~~~~~~~ 376 (437)
|.+.+.++.|+|++. .++++ +|+....++
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 999999999999875 45443 899865544
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=277.19 Aligned_cols=279 Identities=15% Similarity=0.185 Sum_probs=218.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------------------------eeEEEecCCCCeE-E
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------------------------LYDLVVNNYVANI-S 82 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------------------------~~~~~~~~~~~~i-~ 82 (437)
+...|.+++|+ |++++|++|+ |+++++|+..++. +..+.|++++..+ +
T Consensus 63 h~~~V~~v~fs-pdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 63 HTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEEC-CCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 45568899999 9999999987 7899999965432 5577888887766 6
Q ss_pred EecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 83 CILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 83 ~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+..|+.|++||+...+. ..+...|.+++|+| ++.+|++|+.|++|++||+++ .+....+ .+...+.+++|+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~---~~~~~~~-~~~~~v~~~~~~ 215 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT---GQCSLTL-SIEDGVTTVAVS 215 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT---TEEEEEE-ECSSCEEEEEEC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCC---CeeEEEE-EcCCCcEEEEEE
Confidence 67899999999765443 23677899999999 678999999999999999983 4444444 356789999999
Q ss_pred C-CCCcEEEEEeCCCeEEEEeCCCCceeeeEe-------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 159 P-YSEYILATGSADKTVALWDLRNLKLKLHSF-------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 159 ~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
| ++. +|++|+.||.|++||++++.. +..+ .+|...|.+++|+|+++ .|++|+.|+.|++||++......
T Consensus 216 ~~~~~-~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 216 PGDGK-YIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp STTCC-EEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC-------
T ss_pred CCCCC-EEEEEcCCCcEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcc
Confidence 9 677 599999999999999998654 4444 57899999999999998 58999999999999998754322
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC----
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP---- 306 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~---- 306 (437)
... ......+...+.+|...|.+++|+|++. ++++|+.|+.|++||+++++++..+.. |...+..+++++
T Consensus 293 ~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~l~~---h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 293 DSK--TPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGNPLLMLQG---HRNSVISVAVANGSSL 366 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECSSCTT
T ss_pred ccc--CCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEECC---CCCCEEEEEecCCcCc
Confidence 111 0111234566789999999999999999 788999999999999999987766653 556666777665
Q ss_pred --CCCcccccCCCCcccccccccccccccccchh
Q psy4571 307 --TASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 307 --~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
++.++++|+.|++ +++||+..
T Consensus 367 ~p~~~~l~sgs~Dg~-----------i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCK-----------ARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSE-----------EEEEEEEE
T ss_pred CCCCCEEEEECCCCc-----------EEECcccc
Confidence 7889999999999 78888754
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=269.47 Aligned_cols=273 Identities=17% Similarity=0.262 Sum_probs=225.5
Q ss_pred eeecCCCceeEEEecCCC-C-eEEEecCceEEEEEeeecc---------ccccCCCcceEEeeCCCCCEEEEEECCCcEE
Q psy4571 61 IWKKNTPFLYDLVVNNYV-A-NISCILNISILFFEIIFTQ---------NFPFPLSRQDVAWHLLHESLFGSVADDQKLM 129 (437)
Q Consensus 61 iw~~~~~~~~~~~~~~~~-~-~i~~~~~~~i~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~ 129 (437)
....|.+.+..+.+.+.. . .++++.|++|++|++.... ...+...|.+++|+| ++.+|++|+.|++|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLR 90 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEE
Confidence 345788999999998765 3 4488899999999975422 123677999999999 689999999999999
Q ss_pred EEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCC---
Q psy4571 130 IWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE--- 206 (437)
Q Consensus 130 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--- 206 (437)
+||+. ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||++. + ++..+.+|...|.+++|+|.+.
T Consensus 91 ~wd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vwd~~~-~-~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 91 LWDVA---TGETYQRFVGHKSDVMSVDIDKKASM-IISGSRDKTIKVWTIKG-Q-CLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEETT---TTEEEEEEECCSSCEEEEEECTTSCE-EEEEETTSCEEEEETTS-C-EEEEECCCSSCEEEEEECCC-----
T ss_pred EEECC---CCCeeEEEccCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-C-eEEEEeccCCcEEEEEEccCCCCCC
Confidence 99998 56678889999999999999999994 99999999999999985 3 3778889999999999999532
Q ss_pred --cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 207 --TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 207 --~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
..+++|+.|+.|++||++.. .....+.+|...|.+++|+|+++ +|++++.||.|++||+++++
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~--------------~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQF--------------QIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTT--------------EEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE
T ss_pred CccEEEEEeCCCEEEEEECCcc--------------hhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 26899999999999999875 33455789999999999999999 89999999999999999987
Q ss_pred CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc--------CCCccccccC
Q psy4571 285 DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL--------GTEEESSDRH 356 (437)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~--------~h~~~~~~~~ 356 (437)
.+..+. ....+..++|+|++.++++++.++ +++|++..+..+..+. .|...+..+.
T Consensus 230 ~~~~~~----~~~~v~~~~~sp~~~~la~~~~~~------------i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 230 AMYTLS----AQDEVFSLAFSPNRYWLAAATATG------------IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp EEEEEE----CCSCEEEEEECSSSSEEEEEETTE------------EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred EEEEec----CCCcEEEEEEcCCCCEEEEEcCCC------------cEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 776665 245677889999999999987665 6888887766554442 3455677889
Q ss_pred CCCCCcccccc-------cccc
Q psy4571 357 SSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~ 371 (437)
++|+|..+++. +|++
T Consensus 294 ~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 294 WSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp ECTTSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEeecCceEEEEEE
Confidence 99999988764 7776
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=283.17 Aligned_cols=295 Identities=10% Similarity=0.077 Sum_probs=246.5
Q ss_pred cceeEEEEeeCCCcc-eEEEeeccCceEeeec----CC---------------------------CceeEEEecCCCCeE
Q psy4571 34 IYRFYRLCVAEPFDD-AVEERVINEEYKIWKK----NT---------------------------PFLYDLVVNNYVANI 81 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~----~~---------------------------~~~~~~~~~~~~~~i 81 (437)
.-.|.+++|+ |+++ ++++|+.|+.+++|+. .+ +.+..+.|++....+
T Consensus 45 ~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 45 LDNIVSSTWN-PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp CSCCSEEEEC-SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred cCceEEEEEC-CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 4679999999 9999 9999999999999998 33 357778888877766
Q ss_pred -EEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC------
Q psy4571 82 -SCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE------ 151 (437)
Q Consensus 82 -~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~------ 151 (437)
++..++.|++||..... ...+...|.+++|+| ++.+|++++.||.|++||+. ..+.+..+..+...
T Consensus 124 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVI---SGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETT---TTEEEEEECCC---------
T ss_pred EEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECC---CCcEEEEeeccccCccceee
Confidence 56678999999932211 123567899999999 68899999999999999998 45666777777666
Q ss_pred ---------eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 152 ---------VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 152 ---------v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
+.+++|+|++. +++++.||.|++||+++.+. ...+..|...|.+++|+|+++ .|++++.|+.|++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~i~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDK--FVIPGPKGAIFVYQITEKTP-TGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWH 275 (425)
T ss_dssp ------CCCBSCCEEEETTE--EEEECGGGCEEEEETTCSSC-SEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEC
T ss_pred ccccCCcceeeEEEEcCCCE--EEEEcCCCeEEEEEcCCCce-eeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEE
Confidence 99999999764 89999999999999998654 778889999999999999998 589999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
++.... +..+.+|...|.+++|+|++ ++++++.|+.|++||+++++....+.. +...+..+
T Consensus 276 ~~~~~~--------------~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~ 336 (425)
T 1r5m_A 276 GGNGNS--------------QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIV---DGVPIFAG 336 (425)
T ss_dssp SSSBSC--------------SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEEC---TTCCEEEE
T ss_pred CCCCcc--------------ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEeccc---CCccEEEE
Confidence 987643 34467899999999999998 688999999999999999876665543 45567778
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhh--------------------hhhhhcCCCc--cccccCCCCC
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE--------------------EQRQLLGTEE--ESSDRHSSDN 360 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~--------------------~~~~~~~h~~--~~~~~~~~~~ 360 (437)
+|+|++.++++++.++. +++||+.+++ .+..+.+|.. .+..+.++|+
T Consensus 337 ~~s~~~~~l~~~~~dg~-----------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQ-----------VNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp EECTTSSEEEEEETTSC-----------EEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred EEcCCCCEEEEEECCCe-----------EEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 99999999999999998 8999999998 8888999976 8999999999
Q ss_pred Ccccccc
Q psy4571 361 DTEDLNS 367 (437)
Q Consensus 361 ~~~~~~~ 367 (437)
+..++..
T Consensus 406 ~~~l~~~ 412 (425)
T 1r5m_A 406 GNKISVA 412 (425)
T ss_dssp SSEEEEE
T ss_pred CceEEEE
Confidence 9877553
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=284.47 Aligned_cols=291 Identities=11% Similarity=0.088 Sum_probs=231.6
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCC---------c-eeEEEecCCCCeE-EEecCceEEEEEeeeccc----cc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTP---------F-LYDLVVNNYVANI-SCILNISILFFEIIFTQN----FP 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~---------~-~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~----~~ 101 (437)
+.+++|+ |+++++++|+.|+.+++|+..++ . .....+.+....+ ++..++.|++||+..... ..
T Consensus 59 ~~~~~~s-~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 59 GKGNTFE-KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CTTCEEE-EEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred ccceeee-ecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 4478999 99999999999999999995431 2 2333456666666 667889999999764432 24
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|++.. |++++.||.|++||+++
T Consensus 138 h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 138 HVSEITKLKFFP-SGEALISSSQDMQLKIWSVK---DGSNPRTLIGHRATVTDIAIIDRGRN-VLSASLDGTIRLWECGT 212 (420)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSEEEEEETT---TCCCCEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTT
T ss_pred ccCccEEEEECC-CCCEEEEEeCCCeEEEEeCC---CCcCceEEcCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEeECCC
Confidence 678999999999 68899999999999999998 55677888899999999999999995 99999999999999998
Q ss_pred CceeeeEecc---CCCceEEEE---------------------EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 182 LKLKLHSFES---HKDEIFQVQ---------------------WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 182 ~~~~~~~~~~---h~~~v~~v~---------------------~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
++. +..+.. |...|.+++ |+|+++ ++++|+.||.|++||+++....
T Consensus 213 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~-------- 282 (420)
T 3vl1_A 213 GTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQT-------- 282 (420)
T ss_dssp TEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEE--------
T ss_pred Cce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCcee--------
Confidence 654 666653 444555555 567887 5899999999999999876432
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.....+|...|.+++|+|+++.++++|+.||.|++||+++++. +..+.. ++...+...+.+++.++++++.
T Consensus 283 -----~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 283 -----IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI---NEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp -----EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE---STTSCEEEEEEETTEEEEEETT
T ss_pred -----EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc---cCCCCceEEEeCCCCEEEEecC
Confidence 2334568889999999999987788999999999999998754 455443 3455666667789999999999
Q ss_pred CCcccccccccccccccccchhhh---------hhhhhcCCCccccccCCCCCCc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCE---------EQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~---------~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
|+. +++||+...+ ....+.+|...+..+.++|++.
T Consensus 355 d~~-----------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 355 DTS-----------IKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp TEE-----------EEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred Ccc-----------EEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 999 7888877632 2234577888899999999888
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=272.22 Aligned_cols=285 Identities=18% Similarity=0.254 Sum_probs=214.7
Q ss_pred eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc-----cc--c-cCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ-----NF--P-FPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~-----~~--~-~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
++.+..|.+.+..+.+++. ..++++.|+.|++|++.... .+ . +...|.+++|+| ++.+|++|+.|++|++
T Consensus 7 ~~~~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~i 84 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred ceeeccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEE
Confidence 4556788899999998876 44578899999999976431 11 2 667899999999 6889999999999999
Q ss_pred EEcCCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---eeeeEeccCCCceEEEEEcC
Q psy4571 131 WDTRSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 131 wd~~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---~~~~~~~~h~~~v~~v~~~p 203 (437)
||+.... ....+..+.+|.+.|.+++|+|++.+ |++|+.|++|++||++... .++..+.+|...|.+++|+|
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 9986321 22456678899999999999999995 9999999999999995422 34667889999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--CCeEEEEEeCCCeEEEEeCC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--EPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~~~dg~i~iwd~~ 281 (437)
++. +|++|+.|++|++||..... .+++..+.+|...|.+++|+|+ +. .+++|+.|++|++||++
T Consensus 164 ~~~-~l~s~s~D~~i~iW~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 164 SEA-LLASSSYDDTVRIWKDYDDD------------WECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp SSS-EEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEE
T ss_pred CCC-EEEEEcCCCeEEEEECCCCC------------eeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEec
Confidence 998 59999999999999986531 1345678899999999999998 45 78999999999999997
Q ss_pred CCCCce-----eee-eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh--hh-hhhcCCCc-c
Q psy4571 282 TDSDTK-----TMR-LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE--EQ-RQLLGTEE-E 351 (437)
Q Consensus 282 ~~~~~~-----~~~-~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~--~~-~~~~~h~~-~ 351 (437)
.+.... ... ....+...+..++|++++ ++++++.|+. +++||..+++ .. ..+.+|.. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-----------v~iw~~~~~~~~~~~~~~~~h~~~~ 297 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-----------LAVYEEVDGEWKVFAKRALCHGVYE 297 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-----------EEEEEEETTEEEEEEEESCTTTTSC
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-----------EEEEEcCCCceEEEeccccccccce
Confidence 653211 111 111245567778999765 8899999998 7899987763 22 23467876 7
Q ss_pred ccccCCCC--CCcccccc-------ccccC
Q psy4571 352 SSDRHSSD--NDTEDLNS-------IWSMT 372 (437)
Q Consensus 352 ~~~~~~~~--~~~~~~~~-------~w~~~ 372 (437)
+..+.++| ++..+++. +|++.
T Consensus 298 v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 298 INVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 88888988 56666543 78764
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=273.89 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=227.4
Q ss_pred cccccceeEEEEeeCCCc-ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+.-+...|.+++|+ |++ +++++|+.|+.|++|+..++....... ...+...|.+
T Consensus 69 ~~~h~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------~~~h~~~v~~ 123 (383)
T 3ei3_B 69 ASPFDRRVTSLEWH-PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ------------------------GMGPGDAITG 123 (383)
T ss_dssp ECCCSSCEEEEEEC-SSCTTEEEEEEBTSCEEEEETTSTTCEEEEC------------------------CCSTTCBEEE
T ss_pred ccCCCCCEEEEEEC-CCCCCEEEEEcCCCeEEEEeCCCcccceeee------------------------cCCcCCceeE
Confidence 34456789999999 887 999999999999999987665443321 0124567889
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
++|+|.++.+|++++.||.|++||+.. ..+..+. .|...|.+++|+|++.. |++|+.|+.|++||++. + +
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~-~-~ 196 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSG----SVIQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLDG-H-E 196 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTS----CEEEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETTS-C-E
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCC----CceEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECCC-C-E
Confidence 999996678999999999999999983 3344444 34488999999999995 99999999999999953 3 4
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc-CCCe
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPW 264 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~ 264 (437)
+..+..|...|.+++|+|++++++++|+.|+.|++||+++..... ..+..+ +|...|.+++|+| ++.
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~----------~~~~~~-~~~~~v~~~~~s~~~~~- 264 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN----------SYIAEM-PHEKPVNAAYFNPTDST- 264 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT----------CEEEEE-ECSSCEEEEEECTTTSC-
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc----------ceEEEe-cCCCceEEEEEcCCCCC-
Confidence 778889999999999999998679999999999999998754322 233334 7899999999999 988
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecc--------------cCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIR--------------SNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++++++.|+.|++||+++++....+...... ......++++|+|++ +++.|+.
T Consensus 265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~----------- 331 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT----------- 331 (383)
T ss_dssp EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-----------
T ss_pred EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-----------
Confidence 7889999999999999999887766543211 122333567788877 7778887
Q ss_pred cccccchhhhhhhhhcC--CCccccccCCCCCCcccccc------ccccC
Q psy4571 331 LVLFDILVCEEQRQLLG--TEEESSDRHSSDNDTEDLNS------IWSMT 372 (437)
Q Consensus 331 i~~wd~~~~~~~~~~~~--h~~~~~~~~~~~~~~~~~~~------~w~~~ 372 (437)
+++||+.+++.+..+.+ |...+..+.++|++..+++. +|++.
T Consensus 332 i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~ 381 (383)
T 3ei3_B 332 IDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRE 381 (383)
T ss_dssp EEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC
T ss_pred EEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecC
Confidence 89999999999999987 45666667999999877664 67664
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=262.51 Aligned_cols=256 Identities=16% Similarity=0.223 Sum_probs=200.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc--eeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF--LYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
-+.-.|.+++|+ |++++|++|+.|++|++|+..++. .... ...|...|.++
T Consensus 7 ~h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~--------------------------l~gH~~~V~~v 59 (297)
T 2pm7_B 7 AHNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDT--------------------------LTGHEGPVWRV 59 (297)
T ss_dssp SCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEE--------------------------ECCCSSCEEEE
T ss_pred CCcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEE--------------------------EccccCCeEEE
Confidence 345678999999 999999999999999999976421 1111 01355788999
Q ss_pred EeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce-e
Q psy4571 110 AWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL-K 185 (437)
Q Consensus 110 ~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~-~ 185 (437)
+|+|. ++.+|++|+.||+|++||++++. ...+..+.+|...|.+++|+|+ +. +|++|+.|++|++||+++... .
T Consensus 60 ~~s~~~~g~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 60 DWAHPKFGTILASCSYDGKVMIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EECCGGGCSEEEEEETTTEEEEEEBSSSC-BCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC
T ss_pred EecCCCcCCEEEEEcCCCEEEEEEcCCCc-eEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee
Confidence 99863 47899999999999999998542 2455677889999999999997 66 599999999999999987532 2
Q ss_pred eeEeccCCCceEEEEEcCCC------------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 186 LHSFESHKDEIFQVQWSPHN------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
...+.+|...|.+++|+|++ ..+|++|+.|++|++||++..... ......+.+|...|
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~----------~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWV 207 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCE
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----------EEEEEEecCCCCce
Confidence 45677899999999999973 126999999999999999865321 12345688999999
Q ss_pred EEEEEccCC--CeEEEEEeCCCeEEEEeCCCCCCceeeee--eecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 254 SDFSWNPNE--PWVICSVSEDNIMQEYCDSTDSDTKTMRL--DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 254 ~~l~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+++|+|++ ..+|++++.|++|++||+++......... ...+...+..++|+|+|++|++++.|+.
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~---------- 277 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK---------- 277 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC----------
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc----------
Confidence 999999996 34899999999999999987532211111 1223455677899999999999999999
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
+++|+..
T Consensus 278 -v~lw~~~ 284 (297)
T 2pm7_B 278 -VTLWKEN 284 (297)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEEC
Confidence 6777654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-35 Score=279.33 Aligned_cols=277 Identities=15% Similarity=0.211 Sum_probs=226.4
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCC---------------CceeEEEecCC-CCeE-EEecCceEEEEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT---------------PFLYDLVVNNY-VANI-SCILNISILFFEII 95 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~---------------~~~~~~~~~~~-~~~i-~~~~~~~i~~~~~~ 95 (437)
....|.+++|+ |++.+|++|+.|+.+++|+... +.+..+.+++. ...+ ++..|+.|++||+.
T Consensus 66 ~~~~v~~~~~s-~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 66 VDSKFNDLDWS-HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CSSCEEEEEEC-SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred cCCceEEEEEC-CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 35679999999 9999999999999999999544 34667788776 4444 66778999999987
Q ss_pred ecc---------c----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC------CCCeEEEE
Q psy4571 96 FTQ---------N----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH------TAEVNCLS 156 (437)
Q Consensus 96 ~~~---------~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h------~~~v~~l~ 156 (437)
... . ..+...|.+++|+|+++.+|++++.||.|++||++ ..+.+..+..| ...|.+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEE
Confidence 554 1 23567899999999658899999999999999998 45566666665 78999999
Q ss_pred EeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEec-cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADK---TVALWDLRNLKLKLHSFE-SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
|+|++..++++++.|+ .|++||+++...+...+. +|...|.+++|+| +++ +|++++.|+.|++||++++
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~----- 295 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESA----- 295 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSC-----
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCC-----
Confidence 9999866799999999 999999998756577787 8999999999999 776 5999999999999999875
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee--------------------
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-------------------- 291 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------- 291 (437)
+.+..+.+|...|.+++|+|+++.++++++.|+.|++||+.+.........
T Consensus 296 ---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (416)
T 2pm9_A 296 ---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREE 366 (416)
T ss_dssp ---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------
T ss_pred ---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccc
Confidence 345567899999999999999944899999999999999998765433210
Q ss_pred ------------eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 292 ------------DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 292 ------------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
...+...+..++|+|+|+++++++.|+. |++||+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~-----------v~~w~~~~~ 415 (416)
T 2pm9_A 367 SKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG-----------VSITNPKIS 415 (416)
T ss_dssp CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC-----------BCCBCCCCC
T ss_pred cccccccccccCCccccCCccceEEeeCCeEEEEeCCCCe-----------EEEEEeccC
Confidence 0002233447799999999999999999 788888764
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=266.00 Aligned_cols=274 Identities=17% Similarity=0.262 Sum_probs=216.9
Q ss_pred eEeeecCCCceeEEEe-----cC-CCCeE-EEecCceEEEEEeeecc-----------ccccCCCcceEEeeCCCCCEEE
Q psy4571 59 YKIWKKNTPFLYDLVV-----NN-YVANI-SCILNISILFFEIIFTQ-----------NFPFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~-----~~-~~~~i-~~~~~~~i~~~~~~~~~-----------~~~~~~~v~~~~~sp~~~~~l~ 120 (437)
......|.+.+..+.+ .+ +...+ +++.|++|++||+.... ...+...|.+++|+| ++.+++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~ 92 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAI 92 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEE
Confidence 3456678899999988 44 44444 77889999999975321 123667899999999 688999
Q ss_pred EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---ccCCCceE
Q psy4571 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIF 197 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---~~h~~~v~ 197 (437)
+|+.|++|++||++ ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||+.. .. .... ..|...|.
T Consensus 93 s~s~D~~v~lwd~~---~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~-~~-~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 93 SSSWDKTLRLWDLR---TGTTYKRFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILG-EC-KFSSAEKENHSDWVS 166 (343)
T ss_dssp EEETTSEEEEEETT---SSCEEEEEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSS-CE-EEECCTTTSCSSCEE
T ss_pred EEcCCCcEEEEECC---CCcEEEEEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccC-Cc-eeeeecccCCCceee
Confidence 99999999999998 56778888999999999999999995 99999999999999984 32 2222 36889999
Q ss_pred EEEEcCCCC---------cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 198 QVQWSPHNE---------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 198 ~v~~~p~~~---------~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+++|+|++. .++++++.|+.|++||... .....+.+|...|.+++|+|+|+ +|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------~~~~~~~~h~~~v~~~~~s~~g~-~l~s 230 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---------------QIRYTFKAHESNVNHLSISPNGK-YIAT 230 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---------------EEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---------------ceeEEEcCccccceEEEECCCCC-EEEE
Confidence 999999872 2699999999999999432 34456789999999999999999 7899
Q ss_pred EeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh--hh
Q psy4571 269 VSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QL 345 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~ 345 (437)
|+.||.|++||+.... ....+. +...+..++|+|++.++++++ |+. +++||+.+++... .+
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~~-d~~-----------v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFD----AGSTINQIAFNPKLQWVAVGT-DQG-----------VKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEEE-SSC-----------EEEEESSSCCSCSEEEC
T ss_pred EcCCCeEEEEECCCCcccceeec----CCCcEEEEEECCCCCEEEEEC-CCC-----------EEEEEeCCCCCCceEEe
Confidence 9999999999995443 333332 234577789999999887664 555 6788877665443 22
Q ss_pred -----------cCCCccccccCCCCCCcccccc-------cccc
Q psy4571 346 -----------LGTEEESSDRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 346 -----------~~h~~~~~~~~~~~~~~~~~~~-------~w~~ 371 (437)
.+|...+..+.++|+|..+++. +|++
T Consensus 295 ~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 295 EAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred ecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 3788889999999999887764 6765
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=264.37 Aligned_cols=277 Identities=18% Similarity=0.253 Sum_probs=221.6
Q ss_pred cccccceeEEEEeeCCC-cceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 30 LSHSIYRFYRLCVAEPF-DDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~-~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
++=+.-.|.+++|+ |+ +++|+|||.|++|++|+.. ...+..+.+++....+ ++..|+.|++
T Consensus 34 L~GH~~~V~~v~~s-p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEEC-TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ECCccCCEEEEEEe-CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 34456789999999 65 7899999999999999943 4567788888887766 6778999999
Q ss_pred EEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc-EEE
Q psy4571 92 FEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-ILA 166 (437)
Q Consensus 92 ~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~ 166 (437)
|+...... ......+..+.++| .+.+|++|+.|+.+++||.... ........+|...+.+++|++++.. +++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGV--CKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSC--EEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred EeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCC--ceEEEEeccccCcccceEEccCCCCcEEE
Confidence 99654332 23456778888998 6788999999999999998742 2334456689999999999987532 578
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+++.|+.|++||+++.+. ...+.+|.++|++++|+|+++ +|++|+.|+.|++||+++.. .+..+
T Consensus 190 s~~~d~~i~i~d~~~~~~-~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~--------------~~~~~ 253 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKL-KTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGK--------------HLYTL 253 (340)
T ss_dssp EEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE--------------EEEEE
T ss_pred EEcCCCEEEEEECCCCce-eeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCc--------------eeeee
Confidence 999999999999999665 778889999999999999998 59999999999999998753 33445
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee------eecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL------DSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
.. ...|.++.|+|++. +++++.|+.|++||++++.....+.. ...+...+..++|+|+|++|++|+.|+.
T Consensus 254 ~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~- 329 (340)
T 4aow_A 254 DG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL- 329 (340)
T ss_dssp EC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC-
T ss_pred cC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE-
Confidence 44 45899999999987 44777899999999998765554432 1234456777899999999999999999
Q ss_pred cccccccccccccccchhhh
Q psy4571 321 SVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~ 340 (437)
|++||+.+|+
T Consensus 330 ----------v~iW~~~tGt 339 (340)
T 4aow_A 330 ----------VRVWQVTIGT 339 (340)
T ss_dssp ----------EEEEEEEC--
T ss_pred ----------EEEEeCCCcC
Confidence 8999999986
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=265.73 Aligned_cols=298 Identities=13% Similarity=0.114 Sum_probs=245.5
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccc-
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQN- 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~- 99 (437)
...-.|.+++|+ |+++.++++..++.+..|. .|.+.+..+.+++....+.+..++.|++|++.....
T Consensus 7 ~~~~~v~~~~~s-~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 7 MGSKPAYSFHVT-ADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEEECCEEEEC-SSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCC
T ss_pred ccCCceeEEEEC-CCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCce
Confidence 445678899999 9999999888777655544 466788899999999988777799999999764321
Q ss_pred --c------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 100 --F------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 100 --~------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
. .+...+.+++|+| ++.+|++++.||.|++||+.+.. ......+..|...|.+++|+|++.. +++++.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d 162 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSSAPACYALAISPDSKV-CFSCCSD 162 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSE-EEEEETT
T ss_pred eeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCC-cceeeecccCCCceEEEEECCCCCE-EEEEeCC
Confidence 1 3567899999999 68899999999999999998532 2256677889999999999999985 9999999
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
|.|++||+++++. ...+..|...|.+++|+|+++ .+++++.||.|++||+++... +... .|..
T Consensus 163 g~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~--------------~~~~-~~~~ 225 (337)
T 1gxr_A 163 GNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ--------------LQQH-DFTS 225 (337)
T ss_dssp SCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE--------------EEEE-ECSS
T ss_pred CcEEEEeCCCCce-eeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce--------------Eeee-cCCC
Confidence 9999999998654 778888999999999999998 589999999999999987532 2222 4677
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+.+++|+|+++ ++++++.|+.|++||+++++... + ..+...+..++|+|+++++++++.++. +
T Consensus 226 ~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~~l~~~~~dg~-----------i 289 (337)
T 1gxr_A 226 QIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQ-L---HLHESCVLSLKFAYCGKWFVSTGKDNL-----------L 289 (337)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTSSCEEE-E---CCCSSCEEEEEECTTSSEEEEEETTSE-----------E
T ss_pred ceEEEEECCCCC-EEEEEcCCCcEEEEECCCCCeEE-E---cCCccceeEEEECCCCCEEEEecCCCc-----------E
Confidence 899999999999 78899999999999999875432 2 224566778899999999999999998 8
Q ss_pred ccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 332 VLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 332 ~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++||+.+++.+. ...|...+..+.++|++..++..
T Consensus 290 ~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~ 324 (337)
T 1gxr_A 290 NAWRTPYGASIF-QSKESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp EEEETTTCCEEE-EEECSSCEEEEEECTTSCEEEEE
T ss_pred EEEECCCCeEEE-EecCCCcEEEEEECCCCCEEEEe
Confidence 999999988763 35577889999999999876653
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=266.08 Aligned_cols=240 Identities=16% Similarity=0.193 Sum_probs=194.4
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
+...|.+++|+ |+++++++|+.|+.+++|+..++.... .+. .....+...|.+++|+
T Consensus 96 ~~~~v~~~~~s-~~~~~l~s~~~d~~v~iw~~~~~~~~~--------~~~--------------~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 96 RSSWVMTCAYA-PSGNYVACGGLDNICSIYNLKTREGNV--------RVS--------------RELAGHTGYLSCCRFL 152 (340)
T ss_dssp SSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTCSBSC--------EEE--------------EEEECCSSCEEEEEEE
T ss_pred CCccEEEEEEC-CCCCEEEEEeCCCeEEEEECccCCCcc--------eeE--------------EEecCCCccEEEEEEC
Confidence 34457888888 888899999999999999875432100 000 0011245678899999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
| + ..+++++.||+|++||+. ..+.+..+.+|.+.|.+++|+|++. +|++|+.|++|++||++++.. ...+.+|
T Consensus 153 ~-~-~~l~s~s~d~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~-~~~~~~h 225 (340)
T 1got_B 153 D-D-NQIVTSSGDTTCALWDIE---TGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC-RQTFTGH 225 (340)
T ss_dssp E-T-TEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE-EEEECCC
T ss_pred C-C-CcEEEEECCCcEEEEECC---CCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee-EEEEcCC
Confidence 8 3 458899999999999998 5667788899999999999999998 599999999999999998665 7788999
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
...|++++|+|+++ .|++|+.||.|++||++....... .....+...|.+++|+|+++ ++++|+.|
T Consensus 226 ~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~------------~~~~~~~~~v~~~~~s~~g~-~l~~g~~d 291 (340)
T 1got_B 226 ESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMT------------YSHDNIICGITSVSFSKSGR-LLLAGYDD 291 (340)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEE------------ECCTTCCSCEEEEEECTTSS-EEEEEETT
T ss_pred cCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcEEEE------------EccCCcccceEEEEECCCCC-EEEEECCC
Confidence 99999999999998 599999999999999987532211 11223445799999999999 88899999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+.|++||+.+++....+.. |...+..++|+|+|.+|++|+.|+.
T Consensus 292 ~~i~vwd~~~~~~~~~~~~---h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAG---HDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CeEEEEEcccCcEeeEeec---CCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 9999999999877666543 5567778899999999999999999
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=272.88 Aligned_cols=282 Identities=17% Similarity=0.199 Sum_probs=221.6
Q ss_pred cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc----------------------cCCCcceEEeeCCCCCEEEE
Q psy4571 64 KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP----------------------FPLSRQDVAWHLLHESLFGS 121 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~----------------------~~~~v~~~~~sp~~~~~l~~ 121 (437)
.|.+.+..+.|++++..++++.++.+++|+...+.... ....|.+++|+| ++.+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEEE
Confidence 37888999999999999988889999999965433211 111388999999 6889999
Q ss_pred EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEE
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 201 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~ 201 (437)
|+.||.|++||+. ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||+++++. ...+. +...+.+++|
T Consensus 141 ~~~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~-~~~~~-~~~~v~~~~~ 214 (393)
T 1erj_A 141 GAEDRLIRIWDIE---NRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQC-SLTLS-IEDGVTTVAV 214 (393)
T ss_dssp EETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEE-EEEEE-CSSCEEEEEE
T ss_pred EcCCCeEEEEECC---CCcEEEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCee-EEEEE-cCCCcEEEEE
Confidence 9999999999998 55677888999999999999999995 99999999999999998654 44443 6678999999
Q ss_pred cC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 202 SP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 202 ~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
+| +++ ++++|+.|+.|++||++++....... .......+|...|.+++|+|+++ ++++|+.|+.|++||+
T Consensus 215 ~~~~~~-~l~~~s~d~~v~iwd~~~~~~~~~~~-------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 215 SPGDGK-YIAAGSLDRAVRVWDSETGFLVERLD-------SENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNL 285 (393)
T ss_dssp CSTTCC-EEEEEETTSCEEEEETTTCCEEEEEC-------------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC
T ss_pred ECCCCC-EEEEEcCCCcEEEEECCCCcEEEeec-------ccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEEC
Confidence 99 666 69999999999999998865332210 00011257999999999999999 7889999999999999
Q ss_pred CCCCCcee---------eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc
Q psy4571 281 STDSDTKT---------MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE 351 (437)
Q Consensus 281 ~~~~~~~~---------~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~ 351 (437)
++...... ......+...+..++++|++.++++|+.|+. +++||..+++.+..+.+|...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-----------v~iwd~~~~~~~~~l~~h~~~ 354 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-----------VLFWDKKSGNPLLMLQGHRNS 354 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSC
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-----------EEEEECCCCeEEEEECCCCCC
Confidence 86533211 1112234556777899999999999999998 899999999999999999999
Q ss_pred ccccCCCC------CCcccccc-------ccccC
Q psy4571 352 SSDRHSSD------NDTEDLNS-------IWSMT 372 (437)
Q Consensus 352 ~~~~~~~~------~~~~~~~~-------~w~~~ 372 (437)
+..+.+++ ++..++++ +|++.
T Consensus 355 v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 355 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 98887665 56655553 77763
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=313.40 Aligned_cols=318 Identities=15% Similarity=0.202 Sum_probs=255.9
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~ 99 (437)
-+...|++++|+ |+++++++|+.|++|++|+. |.+.+..+.+++.+..+ +++.|+.|++||+..++.
T Consensus 613 ~h~~~v~~~~~s-~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 613 PHTDAVYHACFS-QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccccEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 456779999999 99999999999999999994 45667888898888776 667889999999765543
Q ss_pred c----ccCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 100 F----PFPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 100 ~----~~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
. .+...|.+++|+|+ +..++++|+.||.|++||+. ....+..+.+|.+.|.+++|+|++.. |++|+.||.|
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v 767 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN---QKECRNTMFGHTNSVNHCRFSPDDEL-LASCSADGTL 767 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT---SSSEEEEECCCSSCEEEEEECSSTTE-EEEEESSSEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC---CcchhheecCCCCCEEEEEEecCCCE-EEEEECCCeE
Confidence 2 36778999999995 34589999999999999998 56778888999999999999999995 9999999999
Q ss_pred EEEeCCCCceee-----------------------------------------------------e-EeccCCCceEEEE
Q psy4571 175 ALWDLRNLKLKL-----------------------------------------------------H-SFESHKDEIFQVQ 200 (437)
Q Consensus 175 ~lwd~~~~~~~~-----------------------------------------------------~-~~~~h~~~v~~v~ 200 (437)
++||++++.... . ...+|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 999987643210 0 1126778899999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+|+++ ++++++.||.|++||+.++ ..+..+.+|...|.+++|+|+++ .+++++.||.|++||+
T Consensus 848 ~sp~~~-~l~~~~~dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 848 FSPYDH-LAVIALSQYCVELWNIDSR--------------LKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWET 911 (1249)
T ss_dssp ECSSTT-EEEEECSSSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEH
T ss_pred EcCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEc
Confidence 999998 5889999999999999875 33455678888888888888887 6778888888888875
Q ss_pred CC------------------------------------------------------------------------------
Q psy4571 281 ST------------------------------------------------------------------------------ 282 (437)
Q Consensus 281 ~~------------------------------------------------------------------------------ 282 (437)
.+
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 32
Q ss_pred -CCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccc-----------------------------ccccc
Q psy4571 283 -DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY-----------------------------WQGLV 332 (437)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~-----------------------------~~~i~ 332 (437)
++.... ...+...+..++|+|+|+++++++.|+.+.+|+... ...++
T Consensus 992 ~~~~~~~---~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~ 1068 (1249)
T 3sfz_A 992 NNRVFSS---GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVK 1068 (1249)
T ss_dssp TTSCEEE---CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEE
T ss_pred CCceeee---cccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEE
Confidence 111111 112445566789999999999999999999996442 23488
Q ss_pred cccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+||+.+++....+.+|...+..+.++|++..+++. +|++..
T Consensus 1069 vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~ 1116 (1249)
T 3sfz_A 1069 VWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDL 1116 (1249)
T ss_dssp EEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSS
T ss_pred EEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 99999999999999999999999999999877664 888743
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=284.61 Aligned_cols=258 Identities=11% Similarity=0.079 Sum_probs=193.3
Q ss_pred cceeEEEEeeCCCc---------ceEEEeeccCceEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc----
Q psy4571 34 IYRFYRLCVAEPFD---------DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN---- 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~---------~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~---- 99 (437)
...|++++|+ |++ .++|+|+.++... ..++....+ +++.|++|+||++...+.
T Consensus 133 ~~~V~sv~w~-p~~~~~~~~~~~~~LAv~~~~~~~~------------~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~ 199 (524)
T 2j04_B 133 GGLVTDIAWL-NIEENTDIGKDIQYLAVAVSQYMDE------------PLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVK 199 (524)
T ss_dssp CC--CCCSCE-EECCCCSSCSSEEEEEEEEEC------------------------------CEEEEEEEEETTTCCEEE
T ss_pred CCceeEEEec-ccCCCCccCcCCeEEEEEEecccCC------------ccchhhhhhccCCCCceEEEEEccCCCCCceE
Confidence 4578889898 665 7899988775310 012333333 677899999999765442
Q ss_pred ---cc-cCCCcceEEeeCC-----CCCEEEEEECCCcEEEEEcCCCCCC--------CCeeeeccCCCCeEEEEEeCCCC
Q psy4571 100 ---FP-FPLSRQDVAWHLL-----HESLFGSVADDQKLMIWDTRSHNVS--------KPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 100 ---~~-~~~~v~~~~~sp~-----~~~~l~~~~~dg~v~vwd~~~~~~~--------~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
+. +...|.+++|+|. ++.+||+|+.||+|++||+...... .+...+.+|...|.+++|+|++
T Consensus 200 ~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 22 3467999999995 2579999999999999999754211 2345778999999999999864
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEE--EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.|++|+.||+|++||++++..+...+.+|...|.++ +|+|+++.+|+||+.|++|++||+++.+...
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---------- 347 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---------- 347 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC----------
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc----------
Confidence 499999999999999998666566788999999999 5678773479999999999999998754322
Q ss_pred ceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 241 ELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 241 ~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.+.+|.. .|.+++|+|+++ .+++++.|++|++||++++.+...+.. |...+..++|+|+|.++++|+.|+
T Consensus 348 ----~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 348 ----TTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLVS---RETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp ----EEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTCCEEEEE---CSSCEEEEECCSSCCBCEEEETTT
T ss_pred ----ccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECcccccceeeec---CCCceEEEEeCCCCCeEEEEECCC
Confidence 2344542 478999999999 688999999999999999887776653 667788889999999999999999
Q ss_pred cccccc
Q psy4571 319 TNSVHE 324 (437)
Q Consensus 319 ~~~~~~ 324 (437)
++++|+
T Consensus 420 tv~lwd 425 (524)
T 2j04_B 420 SLIITN 425 (524)
T ss_dssp EEECCB
T ss_pred EEEEEe
Confidence 965553
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=255.23 Aligned_cols=264 Identities=14% Similarity=0.191 Sum_probs=222.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFFEII 95 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~ 95 (437)
+...|.+++|+ |+++++++++ |+.+++|+.. ...+..+.+++....+ ++..++.|++||+.
T Consensus 50 h~~~v~~~~~~-~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 50 HGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCceEEEEEe-cCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 45678999999 9999999999 9999999943 3456778888887766 56678999999976
Q ss_pred eccc------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 96 FTQN------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 96 ~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
..+. ..+...+.+++|+| ++.++++++.||.|++||++ ..+.+..+..|...|.+++|+|++.. |++++
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~ 202 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISNDGTK-LWTGG 202 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEE
T ss_pred CCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCC---CCceeeeeecccCceEEEEECCCCCE-EEEEe
Confidence 5441 12456799999999 68899999999999999998 55677888899999999999999985 99999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.||.|++||+++++. ...+ .+...+.+++|+|+++ .+++++.|+.|++||++... ......|
T Consensus 203 ~dg~i~~~d~~~~~~-~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~---------------~~~~~~~ 264 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD---------------KYQLHLH 264 (337)
T ss_dssp TTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC---------------EEEECCC
T ss_pred cCCcEEEEECCCCce-Eeee-cCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC---------------eEEEcCC
Confidence 999999999998654 4444 4788999999999998 58899999999999998753 2346789
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
...|.+++|+|+++ ++++++.||.|++||+++++...... +...+..++|+|+++++++++.|+.
T Consensus 265 ~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~---------- 329 (337)
T 1gxr_A 265 ESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKK---------- 329 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSC----------
T ss_pred ccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeEEEEec----CCCcEEEEEECCCCCEEEEecCCCe----------
Confidence 99999999999999 78899999999999999987663332 4566777899999999999999998
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
+++||+.
T Consensus 330 -i~iw~~~ 336 (337)
T 1gxr_A 330 -ATVYEVI 336 (337)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEe
Confidence 7777763
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=290.07 Aligned_cols=284 Identities=16% Similarity=0.204 Sum_probs=224.1
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+.-+...|.+++|+..++++|+||+.|++|++|+...... .... ......|...|.+
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~----------------------~~~~~~h~~~v~~ 435 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVA----------------------QRRLTGHSHFVED 435 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEE----------------------EEEEECCSSCEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccc----------------------cceecCCCCcEEE
Confidence 4456778999999944568999999999999999764321 1000 0011235678899
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
++|+| ++.+|++|+.||+|++||+. .......+.+|...|.+++|+|++.. |++|+.|++|++||...... ...
T Consensus 436 v~~s~-~g~~l~sgs~Dg~v~vwd~~---~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~-~~~ 509 (694)
T 3dm0_A 436 VVLSS-DGQFALSGSWDGELRLWDLA---AGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECK-YTI 509 (694)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEE-EEE
T ss_pred EEECC-CCCEEEEEeCCCcEEEEECC---CCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcc-eee
Confidence 99999 68999999999999999998 55677888999999999999999996 99999999999999876332 222
Q ss_pred ---eccCCCceEEEEEcCCCC-cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 189 ---FESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 189 ---~~~h~~~v~~v~~~p~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+|...|.+++|+|++. ..+++|+.|+.|++||+++. +....+.+|...|++++|+|+++
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~- 574 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC--------------KLRSTLAGHTGYVSTVAVSPDGS- 574 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSS-
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEEeCCCC-
Confidence 246888999999999862 36899999999999999875 33456889999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++++|+.||.|++||+++++.+..+. ....+..++|+|++.++++++.++ |++||+.+++.+..
T Consensus 575 ~l~sg~~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~~~------------i~iwd~~~~~~~~~ 638 (694)
T 3dm0_A 575 LCASGGKDGVVLLWDLAEGKKLYSLE----ANSVIHALCFSPNRYWLCAATEHG------------IKIWDLESKSIVED 638 (694)
T ss_dssp EEEEEETTSBCEEEETTTTEEEECCB----CSSCEEEEEECSSSSEEEEEETTE------------EEEEETTTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCceEEEec----CCCcEEEEEEcCCCcEEEEEcCCC------------EEEEECCCCCChhh
Confidence 89999999999999999987665543 244566779999999988876543 79999988887766
Q ss_pred hcCCCc-------------------cccccCCCCCCcccccc-------ccccC
Q psy4571 345 LLGTEE-------------------ESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 345 ~~~h~~-------------------~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+..+.. .+..+.++|+|..++++ +|++.
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 639 LKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred hccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 543321 24567789999887765 77763
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=266.67 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=221.3
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCC-----------------ceeEEEecCC----C---CeE-EE
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP-----------------FLYDLVVNNY----V---ANI-SC 83 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~-----------------~~~~~~~~~~----~---~~i-~~ 83 (437)
.+.-+.-.|.+++|+ | ++|++|+.|+.|++|+..++ .+..+.|.+. . ..+ ++
T Consensus 11 ~~~~h~~~i~~~~~~-~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 11 AGKAHDADIFSVSAC-N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp ESSCSSSCEEEEEEC-S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhcCeEEEEec-C--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 345567789999998 6 89999999999999996543 3566777776 4 444 66
Q ss_pred ecCceEEEEEeeeccc-----c----cc-----CCCcceEEee----CCCCCE-EEEEECCCcEEEEEcCCCCC---CCC
Q psy4571 84 ILNISILFFEIIFTQN-----F----PF-----PLSRQDVAWH----LLHESL-FGSVADDQKLMIWDTRSHNV---SKP 141 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~-----~----~~-----~~~v~~~~~s----p~~~~~-l~~~~~dg~v~vwd~~~~~~---~~~ 141 (437)
..|+.|++|++...+. . .+ ...|.+++|+ | ++.+ |++++.||.|++||+..... ...
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 7899999999876553 2 13 3789999999 8 6778 99999999999999985000 233
Q ss_pred ee-----ee-------ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc---C---CCceEEEEEcC
Q psy4571 142 SH-----TV-------DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES---H---KDEIFQVQWSP 203 (437)
Q Consensus 142 ~~-----~~-------~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~---h---~~~v~~v~~~p 203 (437)
+. .+ ..|...|.+++|+|++ . |++++.||.|++||+++.+. +..+.. | ...|.+++|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-L-IATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E-EEEECTTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECS
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-e-EEEEeCCCcEEEEECCCCce-eEEEeccccccccCCccceEEECC
Confidence 33 55 4588999999999999 5 99999999999999998554 778888 8 99999999999
Q ss_pred CCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-------------ccccEEEEEEccCCCeEEE
Q psy4571 204 HNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-------------HTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 204 ~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~l~~~p~~~~~l~ 267 (437)
+++ +|++++.| +.|++||+++.+. +..+.+ |...|.+++|+|+++ +|+
T Consensus 244 ~~~-~l~~~~~d~~~g~i~i~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 307 (397)
T 1sq9_A 244 QGS-LLAIAHDSNSFGCITLYETEFGER--------------IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLC 307 (397)
T ss_dssp STT-EEEEEEEETTEEEEEEEETTTCCE--------------EEEECBC--------CCBSBSSCEEEEEECSSSS-EEE
T ss_pred CCC-EEEEEecCCCCceEEEEECCCCcc--------------cceeccCcccccccccccccCCcEEEEEECCCCC-EEE
Confidence 998 58899999 9999999987643 344566 899999999999999 788
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeee---cc---------------cCCceeeeecCCC----------CcccccCCCCc
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDS---IR---------------SNGGISSTASPTA----------SSTASESPTPT 319 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~---~~---------------~~~~~~~~~s~~g----------~~l~s~s~d~~ 319 (437)
+++.||.|++||+++++.+..+.... .+ ...+..++|+|+| .++++++.|+.
T Consensus 308 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred EEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc
Confidence 99999999999999988777766210 12 5667788999999 78999999998
Q ss_pred ccccccccccccccccchhhh
Q psy4571 320 NSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~ 340 (437)
|++||+.+|+
T Consensus 388 -----------i~iw~~~~g~ 397 (397)
T 1sq9_A 388 -----------IRWFREAGGK 397 (397)
T ss_dssp -----------EEEEEEEC--
T ss_pred -----------EEEEEcCCCC
Confidence 8999998774
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=267.01 Aligned_cols=271 Identities=11% Similarity=-0.006 Sum_probs=200.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccC-------ceEeeecCCCc---------------------eeEEEecCCCCeEEE--
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINE-------EYKIWKKNTPF---------------------LYDLVVNNYVANISC-- 83 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~-------~v~iw~~~~~~---------------------~~~~~~~~~~~~i~~-- 83 (437)
.|.||+++|+ |++.+|++|+.|. .|++|+...+. +..+.+. ...+.+
T Consensus 14 g~PV~sv~fs-~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFL-NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp SSCEEEEEEE-ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCEEEEEEe-CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 4789999999 9999999998654 59999954321 1222221 122221
Q ss_pred ----------ecCceEEEEEeeecccc-------------ccCCCcceEEeeCCCCCEEEE--EECCCcEEEEEcCCCCC
Q psy4571 84 ----------ILNISILFFEIIFTQNF-------------PFPLSRQDVAWHLLHESLFGS--VADDQKLMIWDTRSHNV 138 (437)
Q Consensus 84 ----------~~~~~i~~~~~~~~~~~-------------~~~~~v~~~~~sp~~~~~l~~--~~~dg~v~vwd~~~~~~ 138 (437)
..++.+++|++...... .....+.+++|+| ++.++++ ++.|++|+|||++ .
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~---~ 166 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPS---D 166 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETT---T
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECC---C
Confidence 24667999986533210 1123478999999 5666654 4478999999998 4
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEeCCC-
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDR- 216 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg- 216 (437)
.+.+..+ .|.+.|.+++|+|+|+. +++++.+ .+.+|+..+++... .....|...|.+++|+|+++ .+++++.|+
T Consensus 167 ~~~~~~~-~~~~~V~~v~fspdg~~-l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~ 242 (365)
T 4h5i_A 167 LTEKFEI-ETRGEVKDLHFSTDGKV-VAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKG 242 (365)
T ss_dssp TEEEEEE-ECSSCCCEEEECTTSSE-EEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSS
T ss_pred CcEEEEe-CCCCceEEEEEccCCce-EEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCc
Confidence 5566665 47788999999999994 8888755 56666666655433 33456888999999999998 488888777
Q ss_pred ---eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee
Q psy4571 217 ---RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 217 ---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 293 (437)
.+++|++....... .....+.+|...|++++|+|+|+ +|++|+.|++|++||+++++++..+. .
T Consensus 243 ~~~~i~~~~~~~~~~~~----------~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~~--~ 309 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSV----------LRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIFK--Q 309 (365)
T ss_dssp CCEEEEEEEEETTEEEE----------EEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEET--T
T ss_pred ceeEEeecccccceecc----------eeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEec--C
Confidence 68889887643211 12345678999999999999999 89999999999999999987766542 2
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
.|...+..++|||||++|++|+.|++ |++||+...
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~t-----------vrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANT-----------IHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSE-----------EEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCe-----------EEEEEcCCC
Confidence 35667888899999999999999999 899998643
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=257.48 Aligned_cols=285 Identities=15% Similarity=0.191 Sum_probs=235.5
Q ss_pred ecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 26 SALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
+...+.-+.-.|.+++|+ |++++|++|+.|+.|++|+. +.+.+..+.+++....+ ++..|+.|++||
T Consensus 24 ~~~~l~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYN-KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEECCSSCEEEEEEC-TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred ccEEEEEeeceEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 334456667789999999 99999999999999999994 45667888888877666 667899999999
Q ss_pred eeecc---ccccCCCcceEEeeCCCCCEEEEEECC-----CcEEEEEcCCCCCC--------CCeeeeccCCC--CeEEE
Q psy4571 94 IIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADD-----QKLMIWDTRSHNVS--------KPSHTVDAHTA--EVNCL 155 (437)
Q Consensus 94 ~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~v~vwd~~~~~~~--------~~~~~~~~h~~--~v~~l 155 (437)
+...+ .+.+...+.+++|+| ++.++++++.+ |.|++||+...... .....+..|.+ .+.++
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 76543 344678999999999 68899999998 99999999854321 23445556666 89999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+|+|++.. |++++.||.|++||+++.......+..|...|.+++|+|+++ .|++++.|+.|++||+++...
T Consensus 182 ~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~------- 252 (369)
T 3zwl_B 182 GWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQV------- 252 (369)
T ss_dssp EECGGGCE-EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-------
T ss_pred EEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCce-------
Confidence 99999995 999999999999999985555888889999999999999998 589999999999999988643
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--------------eEEEEeCCCCCCceeeeeeecccCCcee
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--------------IMQEYCDSTDSDTKTMRLDSIRSNGGIS 301 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (437)
+..+. +...+.+++|+|+++ .+++++.++ .+++||..+++....+.. +...+..
T Consensus 253 -------~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v~~ 320 (369)
T 3zwl_B 253 -------LKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG---HFGPLNT 320 (369)
T ss_dssp -------EEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEETTTCCEEEEEEC---CSSCEEE
T ss_pred -------eeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec---ccCcEEE
Confidence 23333 677899999999999 677888777 899999999987776653 5567778
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++|+|+|++|++++.|+. +++||+..+.....
T Consensus 321 ~~~s~~~~~l~s~~~dg~-----------v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 321 VAISPQGTSYASGGEDGF-----------IRLHHFEKSYFDFK 352 (369)
T ss_dssp EEECTTSSEEEEEETTSE-----------EEEEEECHHHHTCC
T ss_pred EEECCCCCEEEEEcCCCe-----------EEEEECccccchhH
Confidence 899999999999999998 88999988765443
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=265.74 Aligned_cols=285 Identities=12% Similarity=0.156 Sum_probs=224.9
Q ss_pred cccceeEEEEeeCC----CcceEEEeeccCceEeeecCC----------------CceeEEEecCCCC-----eEEEecC
Q psy4571 32 HSIYRFYRLCVAEP----FDDAVEERVINEEYKIWKKNT----------------PFLYDLVVNNYVA-----NISCILN 86 (437)
Q Consensus 32 ~~~~~v~~~~~~~~----~~~~l~tgs~d~~v~iw~~~~----------------~~~~~~~~~~~~~-----~i~~~~~ 86 (437)
-+.-.|.+++|+ | ....+++++.++.|++|+..+ +.+..+.|++... .+++..|
T Consensus 16 ~h~~~v~~i~~~-p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFN-WHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEEC-TTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEe-cccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 345689999999 6 356677777788999999542 4466777877632 3477889
Q ss_pred ceEEEEEeeeccc---c-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee---ccCCCCeEEEEEeC
Q psy4571 87 ISILFFEIIFTQN---F-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---DAHTAEVNCLSFNP 159 (437)
Q Consensus 87 ~~i~~~~~~~~~~---~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---~~h~~~v~~l~~~~ 159 (437)
+.|++||+...+. + .+...|.+++|+|.++.+|++|+.||.|++||+. ..+.+..+ .+|...|.+++|+|
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ---TDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT---TTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee---cCeEEEEecccccccCceeEEEECC
Confidence 9999999764432 2 3678999999999778899999999999999998 44556666 68999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeeeE----------------------------eccCCCceEEEEEcCCCCcEEEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLHS----------------------------FESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~~----------------------------~~~h~~~v~~v~~~p~~~~~l~s 211 (437)
++.. |++++.||.|++||+++++. ... ...|...|.+++|+ ++ ++++
T Consensus 172 ~~~~-l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~ 246 (366)
T 3k26_A 172 LGEK-IMSCGMDHSLKLWRINSKRM-MNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILS 246 (366)
T ss_dssp TSSE-EEEEETTSCEEEEESCSHHH-HHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEE
T ss_pred CCCE-EEEecCCCCEEEEECCCCcc-ccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEE
Confidence 9995 99999999999999997542 222 22389999999999 55 6999
Q ss_pred EeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--CCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--EPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 212 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++.|+.|++||+++.................+..+.+|...|.+++|+|+ ++ +|++|+.||.|++||+++++.....
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGGCE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCcccc
Confidence 99999999999988765443333333344567788899999999999999 88 8889999999999999998766522
Q ss_pred e-eeecc--cCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 290 R-LDSIR--SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 290 ~-~~~~~--~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
. ....+ ...+..++|+|++++|++++.|+. |++||+.
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-----------i~iwd~~ 365 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS-----------IWRWDRL 365 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-----------EEEEEC-
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCE-----------EEEEEec
Confidence 2 11222 466778899999999999999998 7888875
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=296.27 Aligned_cols=188 Identities=9% Similarity=0.092 Sum_probs=154.7
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC----------CCceeEEEecCCCC-eEEEecCceEEEEEeeecc---c
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------TPFLYDLVVNNYVA-NISCILNISILFFEIIFTQ---N 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~~---~ 99 (437)
...|.+++|+ |++.+||+|+.|++|++|+.. ...+..+.|++ +. .++++.|++|++||+...+ .
T Consensus 17 ~~~V~~lafs-pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 17 SSKPIAAAFD-FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp SSCEEEEEEE-TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCCcEEEEEC-CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE
Confidence 5679999999 999999999999999999843 35578888888 55 5588899999999976543 3
Q ss_pred cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe---------eeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 100 FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS---------HTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~---------~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
+.++..|++++|+| ++.+|++|+.||.|++||+++... ... ..+.+|.++|.+++|+|++..++++|+.
T Consensus 95 ~~~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~-~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 95 VFVPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQL-SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp EECSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEE-EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS
T ss_pred EcCCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCcc-ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC
Confidence 34667899999999 689999999999999999984321 000 2346799999999999976446999999
Q ss_pred CCeEEEEeCCCCceeeeEeccC------------------CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 171 DKTVALWDLRNLKLKLHSFESH------------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
||.| +||+++++. ...+..| ...|++++|+|+|+ .|++|+.||.|++||+++++.
T Consensus 173 dg~v-lWd~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 173 YVTL-TYSLVENEI-KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp SCEE-EEETTTTEE-EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCCE
T ss_pred CCcE-EEECCCCce-EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcE
Confidence 9999 999998554 6666544 57799999999998 599999999999999977543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=266.93 Aligned_cols=266 Identities=18% Similarity=0.299 Sum_probs=218.5
Q ss_pred ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCc
Q psy4571 48 DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQK 127 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~ 127 (437)
..+++++.|+.|++|+..++........ .+...|.+++|+| ++.+|++|+.||.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~-------------------------~~~~~v~~v~~s~-~~~~l~~~~~dg~ 157 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAET-------------------------DESTYVASVKWSH-DGSFLSVGLGNGL 157 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEEC-------------------------CTTCCEEEEEECT-TSSEEEEEETTSC
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeec-------------------------CCCCCEEEEEECC-CCCEEEEECCCCe
Confidence 4466666777777777665554433211 1356789999999 7889999999999
Q ss_pred EEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc
Q psy4571 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 128 v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 207 (437)
|++||+. ..+.+..+.+|...|.+++|+ +. +|++|+.||.|++||++........+.+|...|.+++|+|+++
T Consensus 158 i~iwd~~---~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 230 (401)
T 4aez_A 158 VDIYDVE---SQTKLRTMAGHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL- 230 (401)
T ss_dssp EEEEETT---TCCEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-
T ss_pred EEEEECc---CCeEEEEecCCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-
Confidence 9999998 567788888999999999995 44 5999999999999999965666888889999999999999998
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCC
Q psy4571 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSD 285 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~ 285 (437)
.|++|+.|+.|++||+++. ..+..+.+|...|.+++|+|++..++++++ .|+.|++||+++++.
T Consensus 231 ~l~s~~~d~~v~iwd~~~~--------------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSS--------------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp EEEEEETTSCEEEEETTCS--------------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred EEEEEeCCCeEEEccCCCC--------------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 5999999999999999875 334557789999999999999887888876 799999999999987
Q ss_pred ceeeeeeecccCCceeeeecCCCCcccc--cCCCCcccccccccccccccccchhhhhhh--hhcCCCccccccCCCCCC
Q psy4571 286 TKTMRLDSIRSNGGISSTASPTASSTAS--ESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QLLGTEEESSDRHSSDND 361 (437)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~s~~g~~l~s--~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~~~h~~~~~~~~~~~~~ 361 (437)
...+. +...+..++|+|++..+++ |+.++. +++||+.+++... .+.+|...+..+.++|+|
T Consensus 297 ~~~~~----~~~~v~~~~~s~~~~~l~~~~g~~dg~-----------i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 297 VNTVD----AGSQVTSLIWSPHSKEIMSTHGFPDNN-----------LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp EEEEE----CSSCEEEEEECSSSSEEEEEECTTTCE-----------EEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred EEEEe----CCCcEEEEEECCCCCeEEEEeecCCCc-----------EEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 77664 3456778899999999998 668888 8999998865544 467999999999999999
Q ss_pred cccccc-------ccccCHHH
Q psy4571 362 TEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 362 ~~~~~~-------~w~~~~~~ 375 (437)
..+++. +|++...+
T Consensus 362 ~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 362 RILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SEEEEECTTSEEEEEECCC--
T ss_pred CEEEEEeCCCcEEEEECCCCc
Confidence 877764 89985443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-34 Score=262.79 Aligned_cols=254 Identities=19% Similarity=0.203 Sum_probs=197.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |++++|++|+.|++|++|+..++....+. ....|...|.+++
T Consensus 10 ~~H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~------------------------~l~gH~~~V~~v~ 64 (316)
T 3bg1_A 10 TSHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIA------------------------DLRGHEGPVWQVA 64 (316)
T ss_dssp ----CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEE------------------------EEECCSSCEEEEE
T ss_pred ccccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEE------------------------EEcCCCccEEEEE
Confidence 3455679999999 99999999999999999997654321100 0012556889999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce--e
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL--K 185 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~--~ 185 (437)
|+|. ++.+|++|+.|++|++||++++. ......+.+|...|.+++|+|+ +. +|++|+.|++|++||++.... .
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSC-CCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEE
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCc-ceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcce
Confidence 9863 47899999999999999998432 2456677899999999999998 66 499999999999999987532 1
Q ss_pred eeEeccCCCceEEEEEcCCC-----------------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 186 LHSFESHKDEIFQVQWSPHN-----------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~-----------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
...+.+|...|.+++|+|+. + .|++|+.|+.|++||++.... ...+..+.+
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~-----------~~~~~~l~~ 210 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQ-----------WKEEQKLEA 210 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSC-----------EEEEECCBC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCc-----------cceeeeccc
Confidence 34567899999999999973 4 589999999999999965321 123456789
Q ss_pred ccccEEEEEEccCC---CeEEEEEeCCCeEEEEeCCCCCC----ceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 249 HTAKISDFSWNPNE---PWVICSVSEDNIMQEYCDSTDSD----TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 249 h~~~v~~l~~~p~~---~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
|...|.+++|+|++ ..+|++++.|++|++||+++... ...+ ..+...+..++|+|+|.+|++++.|++
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~---~~~~~~v~~v~~sp~g~~las~~~D~~-- 285 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL---HKFNDVVWHVSWSITANILAVSGGDNK-- 285 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE---EECSSCEEEEEECTTTCCEEEEESSSC--
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh---hcCCCcEEEEEEcCCCCEEEEEcCCCe--
Confidence 99999999999987 23899999999999999986321 1222 224566778899999999999999999
Q ss_pred ccccccccccccccch
Q psy4571 322 VHEKNYWQGLVLFDIL 337 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~ 337 (437)
+++|+..
T Consensus 286 ---------v~lw~~~ 292 (316)
T 3bg1_A 286 ---------VTLWKES 292 (316)
T ss_dssp ---------EEEEEEC
T ss_pred ---------EEEEEEC
Confidence 6777764
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=259.75 Aligned_cols=281 Identities=14% Similarity=0.080 Sum_probs=222.6
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-------------CceeEEEecCCCCeE-EEecCceEEEEEeee
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-------------PFLYDLVVNNYVANI-SCILNISILFFEIIF 96 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-------------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~ 96 (437)
.++...|.+++|+ |+++++++|+.|+.|++|+..+ +.+..+.+++....+ ++..|+.|++||+..
T Consensus 5 ~~~~~~i~~~~~s-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 5 SFLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp ESCSSCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred cccCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 3456679999999 9999999999999999999543 446677777777666 667889999999865
Q ss_pred cc---c---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-eeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 97 TQ---N---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 97 ~~---~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.+ . ..+...+.+++|+| ++.+|++|+.||.|++||+.......... ...+|...|.+++|+|++.. |++|+
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~ 161 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGS 161 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE-EEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE-EEEEc
Confidence 53 1 34677899999999 68899999999999999998542211223 33678999999999999985 99999
Q ss_pred CCCeEEEEeCCC-----------------CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 170 ADKTVALWDLRN-----------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 170 ~dg~i~lwd~~~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.||.|++||++. ...++..+..|...|.+++|+|+++ .|++++.|+.|++||+++++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----- 235 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKM----- 235 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTT-----
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc-----
Confidence 999999999641 1334777888999999999999998 58999999999999998753
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCC--cee--------------------
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSD--TKT-------------------- 288 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~--~~~-------------------- 288 (437)
.+..+..|...|.+++|+|++. ++++| .|+.|++|++++ ++. ...
T Consensus 236 ---------~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 236 ---------AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp ---------EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred ---------eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 3555778999999999999998 67666 999999999987 310 000
Q ss_pred --------------eeeeecccCCceeeeec-CCC---CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 289 --------------MRLDSIRSNGGISSTAS-PTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 289 --------------~~~~~~~~~~~~~~~~s-~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
......|...+..++|. ++| .++++++.|+. |++||+.+++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~-----------i~~W~~~~~~~~ 365 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG-----------MSIWDVRSLESA 365 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSE-----------EEEEEHHHHHHH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCc-----------eEEEEecChhHh
Confidence 11112355566667754 777 99999999999 899999988754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=259.37 Aligned_cols=281 Identities=10% Similarity=0.113 Sum_probs=216.2
Q ss_pred ccceeEEEEeeCCCc-ceEEEeec---cCceEeeecCC------------CceeEEEecCC---CCe-EEEecCceEEEE
Q psy4571 33 SIYRFYRLCVAEPFD-DAVEERVI---NEEYKIWKKNT------------PFLYDLVVNNY---VAN-ISCILNISILFF 92 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~-~~l~tgs~---d~~v~iw~~~~------------~~~~~~~~~~~---~~~-i~~~~~~~i~~~ 92 (437)
+...|.+++|+ |++ .++++|+. |+.+++|+..+ ..+..+.|.+. ... +++..++.|++|
T Consensus 17 h~~~v~~~~~~-p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 17 FNYTVFDCKWV-PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCceEEEEEc-CCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 66789999999 877 45667776 99999999543 34666777776 244 467789999999
Q ss_pred Eeeecc-c----cccCCCcceEEe------eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC----CeEEEE-
Q psy4571 93 EIIFTQ-N----FPFPLSRQDVAW------HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA----EVNCLS- 156 (437)
Q Consensus 93 ~~~~~~-~----~~~~~~v~~~~~------sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~----~v~~l~- 156 (437)
|+...+ . ..+...|.+++| +| ++.+|++|+.||.|++||+.... ..+..+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKD--DPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCS--SCSEEECCCTTSCCCCEEEEEE
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCC--CcceeccccCCCCCCceEEEEE
Confidence 987554 2 235678999965 56 67899999999999999998532 25566655554 899998
Q ss_pred ---EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC---CCCcEEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 157 ---FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP---HNETILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 157 ---~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
|+|++. +|++++.||.|++||+++++. .....|...|.+++|+| ++. .+++|+.||.|++||+++.....
T Consensus 173 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 173 GNAYNQEER-VVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp ECCCC-CCC-EEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEETTT
T ss_pred EeccCCCCC-EEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCCccc
Confidence 678888 499999999999999998654 34467899999999999 787 58999999999999998865443
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc----------------eeeeeeec
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT----------------KTMRLDSI 294 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----------------~~~~~~~~ 294 (437)
. .......+|...|++++|+|+++.++++++.||.|++||++.+... ..+.....
T Consensus 249 ~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 249 G---------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp E---------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred c---------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 3 1122345899999999999999878999999999999999876543 22333334
Q ss_pred ccCCceeeeecCCCCccc-ccCCCCcccccccccccccccccchhhhh
Q psy4571 295 RSNGGISSTASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
+...+..++|+|+|.+++ +++.|+. +++||+.+.+.
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~-----------i~iw~~~~~~~ 356 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQT-----------VRVLIVTKLNK 356 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSE-----------EEEEEECC---
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCc-----------EEEEECCCccc
Confidence 566677889999999998 7999998 89999876653
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=259.51 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=194.0
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...|.+++|+ |++..+++|+.|+.+++|+........ ..... .....+...|.+++|+|
T Consensus 106 ~~~v~~~~~s-p~g~~lasg~~d~~i~v~~~~~~~~~~-----~~~~~---------------~~~~~h~~~v~~~~~~~ 164 (354)
T 2pbi_B 106 CTWVMACAYA-PSGCAIACGGLDNKCSVYPLTFDKNEN-----MAAKK---------------KSVAMHTNYLSACSFTN 164 (354)
T ss_dssp SSCCCEEEEC-TTSSEEEEESTTSEEEEEECCCCTTCC-----SGGGC---------------EEEEECSSCEEEEEECS
T ss_pred CCCEEEEEEC-CCCCEEEEeeCCCCEEEEEEecccccc-----ccccc---------------eeeeccCCcEEEEEEeC
Confidence 3457788888 888899999999999988864321100 00000 00112556789999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
++..|++|+.||+|++||++ ..+.+..+.+|...|.+++|+|+ +. +|++|+.||+|++||+++++. +..+..
T Consensus 165 -~~~~l~t~s~D~~v~lwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~~-~~~~~~ 238 (354)
T 2pbi_B 165 -SDMQILTASGDGTCALWDVE---SGQLLQSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQC-VQAFET 238 (354)
T ss_dssp -SSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCCE-EEEECC
T ss_pred -CCCEEEEEeCCCcEEEEeCC---CCeEEEEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCcE-EEEecC
Confidence 67899999999999999998 56778889999999999999884 55 599999999999999999665 788899
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...|++++|+|+++ .|++|+.|++|++||++...... ......+...+.+++|+|+++ ++++|+.
T Consensus 239 h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~~------------~~~~~~~~~~~~~~~~s~~g~-~l~~g~~ 304 (354)
T 2pbi_B 239 HESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADREVA------------IYSKESIIFGASSVDFSLSGR-LLFAGYN 304 (354)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEE------------EECCTTCCSCEEEEEECTTSS-EEEEEET
T ss_pred CCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEE------------EEcCCCcccceeEEEEeCCCC-EEEEEEC
Confidence 999999999999998 59999999999999998753211 111223345789999999999 8889999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
|+.|++||+.+++.+..+.. |...+..++|+|+|++|++|+.|++
T Consensus 305 d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 305 DYTINVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp TSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCcEEEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEEEEcCCCC
Confidence 99999999998876655543 5667788899999999999999999
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=260.02 Aligned_cols=289 Identities=15% Similarity=0.116 Sum_probs=220.4
Q ss_pred ccccceeEEEEeeCC-CcceEEEeeccCceEeeec------------------------CCCceeEEEecC-CCCeE-EE
Q psy4571 31 SHSIYRFYRLCVAEP-FDDAVEERVINEEYKIWKK------------------------NTPFLYDLVVNN-YVANI-SC 83 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~------------------------~~~~~~~~~~~~-~~~~i-~~ 83 (437)
..+.-.|.+++|+ | ++++|++|+.|+.|++|+. +.+.+..+.|.+ ....+ ++
T Consensus 40 ~~h~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIE-PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEEC-TTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEe-cCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 3467789999999 8 9999999999999999994 456688888887 44344 67
Q ss_pred ecCceEEEEEeeecc---ccccCCCcceEEeeCCC--CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 84 ILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLH--ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~--~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
..++.|++||+...+ .+.+...+.+++|+|.+ +.++++|+.||.|++||+. ....+..+.+|...|.+++|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK---SGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS---SSCCCEEECCCCSCEEEEEEC
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC---CcceeeeecCCCCcEEEEEEC
Confidence 779999999976544 34567889999999853 3499999999999999998 556778888999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---------------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSF---------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---------------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
|++.++|++|+.||.|++||+++...+...+ ..|...|.+++|+|+++ .|++++.||.|++||+
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNS 274 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEEC
Confidence 9999779999999999999998866445444 57889999999999998 5899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
+++.......... .......+........+. .+++++.|+.|++||+.+++.+..+.. +...+..++
T Consensus 275 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~v~~~~ 341 (408)
T 4a11_B 275 SNGENTLVNYGKV---------CNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGEQITMLKG---HYKTVDCCV 341 (408)
T ss_dssp TTCCBCCCCCCCC---------CCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCCEEEEECC---CSSCEEEEE
T ss_pred CCCccceeccccc---------cccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCcceeeecc---CCCeEEEEE
Confidence 9876543321100 001111111111222233 466778899999999999988776653 456777889
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+|++.+|++++.|+. +++||+.+++.+.....+
T Consensus 342 ~s~~~~~l~s~~~dg~-----------i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 342 FQSNFQELYSGSRDCN-----------ILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp EETTTTEEEEEETTSC-----------EEEEEECC----------
T ss_pred EcCCCCEEEEECCCCe-----------EEEEeCCCCCccCCCCce
Confidence 9999999999999998 899999998877655433
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=263.01 Aligned_cols=238 Identities=19% Similarity=0.295 Sum_probs=205.4
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|++|+|+| ++.+|++|+.||.|++||++ ..+.+..+.+|...+.+++++ +. +|++|+.|+.+++||.+.
T Consensus 146 ~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~---~~~~~~~~~~h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 146 PGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQ---QQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTS
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCeEEEEEcC---CCcEEEEEeCCCCceEEEeeC--CC-EEEEEeCCCceeEeeecc
Confidence 345789999999 68999999999999999998 567888999999999999886 44 699999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
....+..+.+|...+..+.++|+++ .+++++.|+.+++|+...+.... ..+.....|...|.+++|+|.
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~----------~~~~~~~~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGW----------VPLQTFTQHQGAVKAVAWCPW 287 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCS----------CCSEEECCCSSCEEEEEECTT
T ss_pred cceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccc----------eeeeeecccCCceeeeeeCCC
Confidence 7777788899999999999999998 59999999999999998765332 234557789999999999999
Q ss_pred CCeEEEEE--eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC--CCCcccccccccccccccccch
Q psy4571 262 EPWVICSV--SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES--PTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 262 ~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s--~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+..+++++ +.|++|++||+.++++...+. .+..+..+.|+|++..+++++ .|+. |++||+.
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----~~~~v~~~~~~~~~~~lv~~sg~~d~~-----------I~iwd~~ 352 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQ-----------LVIWKYP 352 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCC-----------EEEEETT
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeec----cccceeeeeecCCCCeEEEEEecCCCE-----------EEEEECC
Confidence 88777764 479999999999998776665 345677889999999887654 6777 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+++.+..+.||.+.|.++.++|+|..++++ +|++.
T Consensus 353 ~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 353 TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 999999999999999999999999988875 89873
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-32 Score=263.91 Aligned_cols=281 Identities=15% Similarity=0.198 Sum_probs=230.7
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeEEEecCceEEEEEeeecccc----c
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNF----P 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~ 101 (437)
+.++.|+ ++++++|+.|++|++|+. |.+.+..+.+.+....++++.|+.|++||+..++.. .
T Consensus 125 ~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 125 ITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 4555654 679999999999999994 456678888877775668889999999997655432 3
Q ss_pred cCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCC--------------------CeeeeccCCCCeEEEEEeCC
Q psy4571 102 FPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSK--------------------PSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 102 ~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~--------------------~~~~~~~h~~~v~~l~~~~~ 160 (437)
+...|.+++|+|. ++.++++|+.||.|++||+.+..... .+..+.+|...|.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 6789999999952 56899999999999999998543211 155677899999887 566
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
+. .+++|+.||.|++||+++++. +..+.+|...|.+++|+|+++ .+++|+.||.|++||++++
T Consensus 280 ~~-~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~-------------- 342 (464)
T 3v7d_B 280 GN-IVVSGSYDNTLIVWDVAQMKC-LYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENG-------------- 342 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT--------------
T ss_pred CC-EEEEEeCCCeEEEEECCCCcE-EEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC--------------
Confidence 77 499999999999999998655 788889999999999999998 5899999999999999875
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+.+..+.+|...|.+++|++ + .+++++.||.|++||++++....... +......++++|++.++++|+ ++.
T Consensus 343 ~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~- 413 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS-ENQ- 413 (464)
T ss_dssp EEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE-TTE-
T ss_pred cEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEec-CCe-
Confidence 44566889999999999974 4 78999999999999999876544332 344555668999999999998 676
Q ss_pred cccccccccccccccchhhhhhhh-hcCCCccccccCCC
Q psy4571 321 SVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEESSDRHSS 358 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~~~~~~~~ 358 (437)
+++||+.+|+.++. +.+|...+..+.++
T Consensus 414 ----------i~iwd~~~g~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 414 ----------FNIYNLRSGKLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp ----------EEEEETTTCCEEESCTTTTCSEEEEEEEE
T ss_pred ----------EEEEECCCCcEEehhhccCCCcEEEEEec
Confidence 89999999998876 68888888888886
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=252.29 Aligned_cols=245 Identities=19% Similarity=0.234 Sum_probs=195.6
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.+...|.+++|+| ++.+|++|+.|++|++||+... ..+.+..+.+|.++|.+++|+|+ +. +|++|+.|++|++||
T Consensus 7 ~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 7 AHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWK 83 (297)
T ss_dssp SCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEEE
T ss_pred CCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEE
Confidence 3567899999999 6889999999999999999743 23567889999999999999864 66 599999999999999
Q ss_pred CCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++ ..+..+..|...|.+++|+|+ +. +|++|+.|+.|++||++...... ...+.+|...|.+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~------------~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 150 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC------------CEEEECCSSCEEE
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee------------eeeeecccCccce
Confidence 98754 235667789999999999997 66 69999999999999998753211 2346789999999
Q ss_pred EEEccCC------------CeEEEEEeCCCeEEEEeCCCCCCceee-eeeecccCCceeeeecCCC---CcccccCCCCc
Q psy4571 256 FSWNPNE------------PWVICSVSEDNIMQEYCDSTDSDTKTM-RLDSIRSNGGISSTASPTA---SSTASESPTPT 319 (437)
Q Consensus 256 l~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~s~~g---~~l~s~s~d~~ 319 (437)
++|+|++ ..+|++|+.|+.|++||+++++..... .....|...+..++|+|++ .++++++.|++
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 9999973 237999999999999999887632221 1222355667888999995 89999999999
Q ss_pred ccccccccccccccccchhhhh---hhhh--cCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 320 NSVHEKNYWQGLVLFDILVCEE---QRQL--LGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~~---~~~~--~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+++||+.++.. ...+ .+|...+..+.++|+|..+++. +|+..
T Consensus 231 -----------v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 231 -----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp -----------EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred -----------EEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 78888876431 1122 5788889999999999887764 77763
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-33 Score=263.28 Aligned_cols=232 Identities=12% Similarity=0.123 Sum_probs=181.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
....|.+++|+ |++++|++|+.|+.|++|+.. .+.+..+.|++....+ +++.|+.|++||+....
T Consensus 10 ~~~~v~~~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred CCCcEEEEEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 34578899999 999999999999999999943 3457888888887666 67789999999987654
Q ss_pred -------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 99 -------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 99 -------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
...+...|.+++|+| ++.+|++|+.||.|++||++..........+.+ |...|.+++|+|++.. |++|+.
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~ 166 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCA 166 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE-EEEEES
T ss_pred ceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE-EEEEeC
Confidence 224677999999999 688999999999999999986543335677777 9999999999999984 999999
Q ss_pred CCeEEEEeCCCC-----------------ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCC
Q psy4571 171 DKTVALWDLRNL-----------------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233 (437)
Q Consensus 171 dg~i~lwd~~~~-----------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 233 (437)
|+.|++||++.. ..++..+ .|...|.+++|+|+++. |++|+.||.|++||++++....
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~~d~~i~iwd~~~~~~~~--- 241 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAGHDSSVTIAYPSAPEQPP--- 241 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEETTTEEC-CEECSTTSCE---
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEeCCCcEEEEECCCCCCcc---
Confidence 999999998631 2234455 89999999999999985 8999999999999999875411
Q ss_pred CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
..+..+.+|...|.+++|+|+++ ++++++.|+.+ +|+..
T Consensus 242 -------~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 -------RALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -------EECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred -------eeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 11344778999999999999998 78788766666 66655
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=259.71 Aligned_cols=265 Identities=15% Similarity=0.176 Sum_probs=221.8
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccccc-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNFP- 101 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~~- 101 (437)
.-.|.+++|+ |++++|++|+.|+.|++|+. +.+.+..+.+.+....+ ++..++.|++||+...+...
T Consensus 108 ~~~v~~~~~s-~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 108 TNQVTCLAWS-HDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp CBCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 4489999999 99999999999999999993 45668888888887766 67789999999976443221
Q ss_pred --c-CCC---------------cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc
Q psy4571 102 --F-PLS---------------RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163 (437)
Q Consensus 102 --~-~~~---------------v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 163 (437)
. ... +.+++|+| + ..+++++.+|.|++||+. ..+.+..+..|...|.+++|+|++..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQIT---EKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp ECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETT---CSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcC---CCceeeeeccCCCceEEEEECCCCCE
Confidence 1 222 89999999 3 568899999999999998 45677788899999999999999994
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
|++++.||.|++||+++.+. ...+..|...|.+++|+|++ .+++++.|+.|++||+++. +.+
T Consensus 262 -l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~--------------~~~ 323 (425)
T 1r5m_A 262 -LLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQN--------------TLL 323 (425)
T ss_dssp -EEEEETTSCEEEECSSSBSC-SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTT--------------EEE
T ss_pred -EEEEcCCCEEEEEECCCCcc-ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCC--------------cEe
Confidence 99999999999999998554 77888899999999999998 5899999999999999875 345
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC--------------------CceeeeeeecccC--Ccee
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS--------------------DTKTMRLDSIRSN--GGIS 301 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~~--~~~~ 301 (437)
..+..|...|.+++|+|+++ ++++++.||.|++||+++++ .+..+. .+.. .+..
T Consensus 324 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~ 399 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ---SSQDNDYIFD 399 (425)
T ss_dssp EEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC---CTTCCCCEEE
T ss_pred EecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc---CcccCCceEE
Confidence 56778999999999999999 88899999999999998776 333333 2333 6778
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
++|+|++++|++++.|+. +++||+.
T Consensus 400 ~~~s~~~~~l~~~~~dg~-----------i~iw~~~ 424 (425)
T 1r5m_A 400 LSWNCAGNKISVAYSLQE-----------GSVVAIP 424 (425)
T ss_dssp EEECTTSSEEEEEESSSC-----------CEEEECC
T ss_pred EEccCCCceEEEEecCce-----------EEEEeec
Confidence 899999999999999998 7888764
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-32 Score=260.80 Aligned_cols=263 Identities=14% Similarity=0.174 Sum_probs=204.6
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCC----------------------------------CceeEEEecCCC
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----------------------------------PFLYDLVVNNYV 78 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----------------------------------~~~~~~~~~~~~ 78 (437)
..-.|.+++|+ |++++|++|+.|+.|++|+..+ +.+..+.|.+..
T Consensus 27 ~~~~V~~v~~s-~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFN-HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEEC-SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEEC-CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 35679999999 9999999999999999999553 346777887775
Q ss_pred ---CeEEEecCceEEEEEeeeccc--------------------------------------------cccCCCcceEEe
Q psy4571 79 ---ANISCILNISILFFEIIFTQN--------------------------------------------FPFPLSRQDVAW 111 (437)
Q Consensus 79 ---~~i~~~~~~~i~~~~~~~~~~--------------------------------------------~~~~~~v~~~~~ 111 (437)
..++++.|+.|++||+..... ..+...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 345888999999999765322 246778999999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-------eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-------TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-------~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
+| ++.+|++| .||.|++||+.... ..+. .+.+|...|.+++|+|++..+|++|+.||.|++||+++++.
T Consensus 186 ~~-~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 186 NS-DYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CT-TSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred cC-CCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99 68899998 79999999998321 2222 35689999999999999833699999999999999998653
Q ss_pred e---eeEeccCCC------------ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-CCCCCCCCCCCCCCCceEEEecC
Q psy4571 185 K---LHSFESHKD------------EIFQVQWSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 185 ~---~~~~~~h~~------------~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
. ...+..|.. .|.+++|+|+++ +|++++. +.|++||++. +..... +.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~--------------~~~ 325 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVET--------------YQV 325 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCC--------------EES
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccce--------------eec
Confidence 1 466777775 899999999998 5888888 9999999987 433332 455
Q ss_pred cccc---------------EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee--------------------
Q psy4571 249 HTAK---------------ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-------------------- 293 (437)
Q Consensus 249 h~~~---------------v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------- 293 (437)
|... +..++|+|+++ +|++|+.||.|++||+.+++... +....
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKR 403 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCC
T ss_pred cccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCc
Confidence 5431 33499999999 77899999999999999886542 11110
Q ss_pred ----------cccCCceeeeecCCCCcccccCCCC
Q psy4571 294 ----------IRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 294 ----------~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.....+..++|+|+|.+|++++.++
T Consensus 404 ~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 404 KKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred ccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 1123456689999999999998876
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=246.51 Aligned_cols=275 Identities=14% Similarity=0.153 Sum_probs=228.4
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++| |++.++++|+.|+.|++|+..++....... .+...|.+++
T Consensus 15 ~~h~~~v~~~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--------------------------~~~~~v~~~~ 66 (313)
T 3odt_A 15 KGHDQDVRDVVA--VDDSKVASVSRDGTVRLWSKDDQWLGTVVY--------------------------TGQGFLNSVC 66 (313)
T ss_dssp CCCSSCEEEEEE--EETTEEEEEETTSEEEEEEESSSEEEEEEE--------------------------ECSSCEEEEE
T ss_pred hCCCCCcEEEEe--cCCCEEEEEEcCCcEEEEECCCCEEEEEee--------------------------cCCccEEEEE
Confidence 445667899998 678899999999999999987655443321 2346788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++.+|++|+.||.|++|++......+.+..+.+|...|.+++|+ +. .+++++.||.|++|| . ......+.
T Consensus 67 ~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~-~~~~~~~~ 139 (313)
T 3odt_A 67 YDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--E-GSLVYNLQ 139 (313)
T ss_dssp EET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--T-TEEEEEEE
T ss_pred ECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--C-CcEEEecc
Confidence 999 78899999999999999998766667788889999999999994 55 599999999999999 3 34477888
Q ss_pred cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCCCeEEEE
Q psy4571 191 SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s 268 (437)
.|..++.+++|+| +++ .+++++.||.|++||.. ..+..+.. |...+.+++|+|++. +++
T Consensus 140 ~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~----------------~~~~~~~~~~~~~i~~~~~~~~~~--~~~ 200 (313)
T 3odt_A 140 AHNASVWDAKVVSFSEN-KFLTASADKTIKLWQND----------------KVIKTFSGIHNDVVRHLAVVDDGH--FIS 200 (313)
T ss_dssp CCSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT----------------EEEEEECSSCSSCEEEEEEEETTE--EEE
T ss_pred cCCCceeEEEEccCCCC-EEEEEECCCCEEEEecC----------------ceEEEEeccCcccEEEEEEcCCCe--EEE
Confidence 8999999999998 666 69999999999999933 22344555 889999999999997 779
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
++.||.|++||+++++.+..+.. +...+..++|+|++ .+++++.|+. +++||+.+++.+..+.+|
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~dg~-----------v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNG-DIVSCGEDRT-----------VRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTS-CEEEEETTSE-----------EEEECTTTCCEEEEEECS
T ss_pred ccCCCeEEEEECCchhhhhhhhc---CCceEEEEEEecCC-CEEEEecCCE-----------EEEEECCCCceeEEEecc
Confidence 99999999999999887776653 45667788999999 6888999988 899999999999999999
Q ss_pred CccccccCCCCCCcccccc------ccccCHH
Q psy4571 349 EEESSDRHSSDNDTEDLNS------IWSMTDE 374 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~------~w~~~~~ 374 (437)
...+..+.++|++..+..+ +|++...
T Consensus 266 ~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 266 AISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred CceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 9999999999999855433 8888654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=265.46 Aligned_cols=280 Identities=13% Similarity=0.153 Sum_probs=214.4
Q ss_pred ccccceeEEEEeeCC-CcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEE
Q psy4571 31 SHSIYRFYRLCVAEP-FDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFF 92 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~ 92 (437)
..+...|.+++|+ | ++++|++|+.|++|++|+.. .+.+..+.+.+....+ ++..|+.|++|
T Consensus 60 ~~h~~~V~~~~~s-~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVS-PGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEE-CSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEEC-CCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 3456789999999 8 99999999999999999932 3457788888877655 77889999999
Q ss_pred Eee---eccccc----------------cCCCcceEE--eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--CC
Q psy4571 93 EII---FTQNFP----------------FPLSRQDVA--WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HT 149 (437)
Q Consensus 93 ~~~---~~~~~~----------------~~~~v~~~~--~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~ 149 (437)
|+. .++... ....+.++. ++| ++.+|++|+.||.|++||++ ..+.+..+.+ |.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~h~ 214 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIR---TLERLQIIENSPRH 214 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETT---TCCEEEEEECCGGG
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCC---CCeeeEEEccCCCC
Confidence 984 221111 334555666 446 57899999999999999998 5677778877 88
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-cCCCceEEEEEcC----CCCcEEEEEeCCCeEEEEEcC
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSP----HNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p----~~~~~l~sg~~dg~i~vwd~~ 224 (437)
+.|.+++|+|++.. |++|+.||.|++||+++++. +..+. .|..+|.+++|+| ++. +|++|+.||.|++||++
T Consensus 215 ~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 215 GAVSSICIDEECCV-LILGTTRGIIDIWDIRFNVL-IRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp CCEEEEEECTTSCE-EEEEETTSCEEEEETTTTEE-EEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETT
T ss_pred CceEEEEECCCCCE-EEEEcCCCeEEEEEcCCccE-EEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcC
Confidence 99999999999985 99999999999999998554 66664 7888999997765 455 69999999999999999
Q ss_pred CCCCCCCCCCCCCCCCceEE----------EecC--ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee
Q psy4571 225 KIGEEQSTEDAEDGPPELLF----------IHGG--HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~----------~~~~--h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 292 (437)
++.................+ .+.+ |...|++++|+ +++ +|++|+.|+.|++||+++++....+...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCCcccceEEecc
Confidence 87644332211111100000 1233 88889999999 666 8899999999999999999877766531
Q ss_pred e----------------------------------cccCCceeeeecCC--CCcccccCCCCcc
Q psy4571 293 S----------------------------------IRSNGGISSTASPT--ASSTASESPTPTN 320 (437)
Q Consensus 293 ~----------------------------------~~~~~~~~~~~s~~--g~~l~s~s~d~~~ 320 (437)
. .|...+..++++++ +.++++|+.||.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I 433 (437)
T 3gre_A 370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLI 433 (437)
T ss_dssp --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCE
T ss_pred cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceE
Confidence 0 14556677788887 8899999999993
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-32 Score=272.69 Aligned_cols=318 Identities=14% Similarity=0.114 Sum_probs=253.9
Q ss_pred ccce-eEEEEeeCC--CcceEEEeeccCceEeeecC-------------------CCceeEEEecCCCCeEEEec-C---
Q psy4571 33 SIYR-FYRLCVAEP--FDDAVEERVINEEYKIWKKN-------------------TPFLYDLVVNNYVANISCIL-N--- 86 (437)
Q Consensus 33 ~~~~-v~~~~~~~~--~~~~l~tgs~d~~v~iw~~~-------------------~~~~~~~~~~~~~~~i~~~~-~--- 86 (437)
+... |.+++|+ | ++++|++|+.|+.|++|+.. .+.+..+.+++....+.+.. +
T Consensus 62 h~~~~v~~~~~s-p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 62 HGSSVVTTVKFS-PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 140 (615)
T ss_dssp TTTSCEEEEEEC-SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC
T ss_pred CCCceEEEEEEC-cCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC
Confidence 3455 9999999 8 99999999999999999973 34577788888888775544 3
Q ss_pred -ceEEEEEeee--ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC---CeEEEEEeCC
Q psy4571 87 -ISILFFEIIF--TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA---EVNCLSFNPY 160 (437)
Q Consensus 87 -~~i~~~~~~~--~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~ 160 (437)
+.|.+||... .....+...|.+++|+|++..++++++.||.|++||+. ..+.+..+.+|.. .|.+++|+|+
T Consensus 141 ~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 141 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP---PFKFSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp SEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT---TBEEEEEECSSSCTTCCEEEEEECST
T ss_pred ccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC---CcceeeeecccCCCCceEEEEEECCC
Confidence 5899998321 11224667899999999655589999999999999998 5677888889999 9999999999
Q ss_pred -CCcEEEEEeCCCeEEEEeCCCCceeeeEe-c---cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 161 -SEYILATGSADKTVALWDLRNLKLKLHSF-E---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 161 -~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-~---~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+. .|++++.||.|++||+++++. +..+ . .|...|.+++|+ +++ .+++++.|+.|++||+++++........
T Consensus 218 ~~~-~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 218 SGE-FVITVGSDRKISCFDGKSGEF-LKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp TCC-EEEEEETTCCEEEEETTTCCE-EEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCC-EEEEEeCCCeEEEEECCCCCE-eEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 88 499999999999999998665 6666 5 899999999999 887 5899999999999999865322110000
Q ss_pred --------------------------------------------------------------------------------
Q psy4571 236 -------------------------------------------------------------------------------- 235 (437)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (437)
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCS
T ss_pred CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccC
Confidence
Q ss_pred -----------------CCC------------------------------------------C-----------------
Q psy4571 236 -----------------EDG------------------------------------------P----------------- 239 (437)
Q Consensus 236 -----------------~~~------------------------------------------~----------------- 239 (437)
.++ .
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 000 0
Q ss_pred ------------Cce----------E--EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc
Q psy4571 240 ------------PEL----------L--FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR 295 (437)
Q Consensus 240 ------------~~~----------~--~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 295 (437)
... + ..+.+|...|++++|+|+++ +|++++.||.|++||+.+++.+..+.. .+
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h 530 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET-YIAAGDVMGKILLYDLQSREVKTSRWA--FR 530 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEECCSC--CC
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC-EEEEcCCCCeEEEeeCCCCcceeEeec--CC
Confidence 000 0 33456788999999999999 888999999999999999876655432 14
Q ss_pred cCCceeeeecC----------CCCcccccCCCCcccccccccccccccccchhh-hhhhhhcCCCccccccCCCCCCccc
Q psy4571 296 SNGGISSTASP----------TASSTASESPTPTNSVHEKNYWQGLVLFDILVC-EEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 296 ~~~~~~~~~s~----------~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
...+..++|+| ++++|++++.|+. |++||+.++ +.+..+.+|...+..+.|+|++. +
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~-----------i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTN-----------IFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSC-----------EEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCc-----------EEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence 56678889999 9999999999998 899999998 78888999999999999999998 6
Q ss_pred ccc-------ccccCH
Q psy4571 365 LNS-------IWSMTD 373 (437)
Q Consensus 365 ~~~-------~w~~~~ 373 (437)
++. +|++..
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 654 787653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=257.00 Aligned_cols=288 Identities=15% Similarity=0.172 Sum_probs=226.3
Q ss_pred EeeecCCCceeEEEecCC-----CCeEEEecCceEEEEEeeecccc---------ccCCCcceEEeeCCC---CCEEEEE
Q psy4571 60 KIWKKNTPFLYDLVVNNY-----VANISCILNISILFFEIIFTQNF---------PFPLSRQDVAWHLLH---ESLFGSV 122 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~-----~~~i~~~~~~~i~~~~~~~~~~~---------~~~~~v~~~~~sp~~---~~~l~~~ 122 (437)
++-..|.+.+..+.+++. ...+++..++.|++|+....+.. .+...|.+++|+|+. +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 455578899999999873 22557777889999998754432 134679999999943 4699999
Q ss_pred ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeEe---ccCCCceEE
Q psy4571 123 ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQ 198 (437)
Q Consensus 123 ~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---~~h~~~v~~ 198 (437)
+.||.|++||+. ..+.+..+.+|...|.+++|+| ++. +|++|+.||.|++||+++++. ...+ ..|...|.+
T Consensus 92 ~~dg~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSRGIIRIINPI---TMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDEVLS 166 (366)
T ss_dssp ETTCEEEEECTT---TCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSCEEE
T ss_pred cCCCEEEEEEch---hceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeE-EEEecccccccCceeE
Confidence 999999999998 5677888889999999999999 777 599999999999999998654 6666 689999999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC--------------CCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--------------AEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 199 v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
++|+|+++ .|++++.||.|++||+++......... .............+|...|.+++|+ ++
T Consensus 167 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~- 242 (366)
T 3k26_A 167 ADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD- 242 (366)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-
T ss_pred EEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-
Confidence 99999998 589999999999999987643221110 0000112234455699999999998 55
Q ss_pred EEEEEeCCCeEEEEeCCCCCCc-----------eeeeeeecccCCceeeeecCC--CCcccccCCCCccccccccccccc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDT-----------KTMRLDSIRSNGGISSTASPT--ASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~~~~~~~~~s~~--g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
++++++.|+.|++||++++... ..+.....+...+..++|+|+ +.++++|+.|+. |
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~-----------i 311 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGK-----------L 311 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSC-----------E
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCc-----------E
Confidence 7889999999999999887541 112222334556777899999 999999999998 8
Q ss_pred ccccchhhhhhh----hhcCC--CccccccCCCCCCcccccc
Q psy4571 332 VLFDILVCEEQR----QLLGT--EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 332 ~~wd~~~~~~~~----~~~~h--~~~~~~~~~~~~~~~~~~~ 367 (437)
++||+.+++... .+.+| ...+..+.++|++..+++.
T Consensus 312 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 312 YVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp EEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE
Confidence 999999987665 67777 7899999999999877764
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.81 Aligned_cols=297 Identities=11% Similarity=0.168 Sum_probs=249.5
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------------------------------------------
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------------------------------------- 65 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------------------------------------- 65 (437)
+...|.+++|+ |++..+++++.|+.+++|+..
T Consensus 881 h~~~v~~v~~s-pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 881 HLSWVHGVMFS-PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CccceEEEEEC-CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 45568999999 999999999999999999842
Q ss_pred -CCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC
Q psy4571 66 -TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 139 (437)
Q Consensus 66 -~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~ 139 (437)
...+..+.+++....+ ++..++.|.+|+....... .+...|.+++|+| ++.+|++++.||.|++||+.++
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~--- 1035 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG--- 1035 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTT---
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCC---
Confidence 1245667777887777 5567899999997654432 3677899999999 6889999999999999999843
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
. ......|...|.+++|+|++. +++++.||.|++||+.+++. ...+.+|.+.|.+++|+|+++. +++++.|+.|+
T Consensus 1036 ~-~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~~v~~~~~s~d~~~-l~s~s~d~~v~ 1110 (1249)
T 3sfz_A 1036 D-YVFLQAHQETVKDFRLLQDSR--LLSWSFDGTVKVWNVITGRI-ERDFTCHQGTVLSCAISSDATK-FSSTSADKTAK 1110 (1249)
T ss_dssp E-EECCBCCSSCEEEEEECSSSE--EEEEESSSEEEEEETTTTCC-CEEEECCSSCCCCEEECSSSSS-CEEECCSSCCC
T ss_pred c-eEEEecCCCcEEEEEEcCCCc--EEEEECCCcEEEEECCCCce-eEEEcccCCcEEEEEECCCCCE-EEEEcCCCcEE
Confidence 2 234568999999999999764 88999999999999999665 7788899999999999999985 89999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee------eee
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR------LDS 293 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~ 293 (437)
+||+.++..... +.+|...|++++|+|+++ ++++++.||.|++||+.+++....+. ...
T Consensus 1111 iwd~~~~~~~~~--------------l~~h~~~v~~~~~s~dg~-~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 1175 (1249)
T 3sfz_A 1111 IWSFDLLSPLHE--------------LKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTA 1175 (1249)
T ss_dssp EECSSSSSCSBC--------------CCCCSSCEEEEEECSSSS-EEEEEETTSCCCEEESSSSCCCCCCCCCC------
T ss_pred EEECCCcceeee--------------eccCCCcEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceEEEecccccccccc
Confidence 999988755443 678999999999999999 89999999999999999998776541 112
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+...+..++|+|+|+++++++ +. +++||+.+|+.+..+.+|...+..+.++|+|..++..
T Consensus 1176 ~~~~~v~~l~fs~dg~~l~s~~--g~-----------v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1176 THGGWVTDVCFSPDSKTLVSAG--GY-----------LKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp -CCSCCCEEEECTTSSCEEEES--SS-----------EEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEE
T ss_pred ccCceEEEEEECCCCCEEEECC--Ce-----------EEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEe
Confidence 3556677889999999999886 45 8999999999999999999999999999999876653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=282.31 Aligned_cols=317 Identities=9% Similarity=0.022 Sum_probs=226.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCC----------ceeEEEecCCCCeE-EEecCceEEEEEeeeccc---
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP----------FLYDLVVNNYVANI-SCILNISILFFEIIFTQN--- 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~----------~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~--- 99 (437)
...|.+++|+ | +++|++++.|++|++|+..++ .+..+.+++....+ ++..|+.|++||+.....
T Consensus 58 ~~~V~~l~fs-p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~ 135 (902)
T 2oaj_A 58 RSAIKEMRFV-K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSF 135 (902)
T ss_dssp CCCEEEEEEE-T-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEEc-C-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 4579999999 7 779999999999999997654 45667777777766 567899999999754432
Q ss_pred ------------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC------------------C
Q psy4571 100 ------------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH------------------T 149 (437)
Q Consensus 100 ------------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h------------------~ 149 (437)
..+...|.+++|+|.+...+++|+.||.| +||++ ..+.+..+..| .
T Consensus 136 ~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 136 KLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLV---ENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETT---TTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred eeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECC---CCceEEEEecccCCcCCCcccccccccccC
Confidence 12557899999999666899999999999 99998 44555555544 5
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE--e---cc-------------CCCceEEEEEc----CCCCc
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS--F---ES-------------HKDEIFQVQWS----PHNET 207 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~--~---~~-------------h~~~v~~v~~~----p~~~~ 207 (437)
..|.+++|+|+|.+ |++|+.||+|++||+++++. +.. + .. |..+|++++|+ |++..
T Consensus 212 ~~V~~v~fspdg~~-lasgs~Dg~i~lWd~~~g~~-~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ 289 (902)
T 2oaj_A 212 PKVIQSLYHPNSLH-IITIHEDNSLVFWDANSGHM-IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS 289 (902)
T ss_dssp CCEEEEEECTTSSE-EEEEETTCCEEEEETTTCCE-EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred CCeEEEEEcCCCCE-EEEEECCCeEEEEECCCCcE-EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence 78999999999995 99999999999999988654 321 2 11 34468888884 33333
Q ss_pred EEEEEeCC------------------------------------------------------------------------
Q psy4571 208 ILASSGTD------------------------------------------------------------------------ 215 (437)
Q Consensus 208 ~l~sg~~d------------------------------------------------------------------------ 215 (437)
++++|+.|
T Consensus 290 ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~ 369 (902)
T 2oaj_A 290 LLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILL 369 (902)
T ss_dssp EEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEE
T ss_pred EEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEE
Confidence 45555332
Q ss_pred ----CeEEEEEcCCCCCCCC-----------------------------------------CCCCCC-------CCC-ce
Q psy4571 216 ----RRLHVWDLSKIGEEQS-----------------------------------------TEDAED-------GPP-EL 242 (437)
Q Consensus 216 ----g~i~vwd~~~~~~~~~-----------------------------------------~~~~~~-------~~~-~~ 242 (437)
|.|++||+.++..... +..... .+. ..
T Consensus 370 ~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~ 449 (902)
T 2oaj_A 370 ILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTA 449 (902)
T ss_dssp EETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEE
T ss_pred EcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcE
Confidence 3445555433211000 000000 000 00
Q ss_pred ---------E---------------EE--e-----cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc-----
Q psy4571 243 ---------L---------------FI--H-----GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT----- 286 (437)
Q Consensus 243 ---------~---------------~~--~-----~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----- 286 (437)
+ .. + .+|...|.+|+|+|+++ +||+|+.||+|++||+.+++..
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~ 528 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENR 528 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEECCC------
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCccccCcccc
Confidence 0 00 1 17888999999999999 8999999999999999876320
Q ss_pred -------------------------------------eeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 287 -------------------------------------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 287 -------------------------------------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.+.....+...+..++||||| +||+|+.|++
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t---------- 597 (902)
T 2oaj_A 529 PESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS---------- 597 (902)
T ss_dssp ---------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE----------
T ss_pred CCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc----------
Confidence 1122222356677888999999 9999999999
Q ss_pred ccccccchhhhhh-----hhhc-CCCccccccCCC-----CCC---cccccc-------cccc
Q psy4571 330 GLVLFDILVCEEQ-----RQLL-GTEEESSDRHSS-----DND---TEDLNS-------IWSM 371 (437)
Q Consensus 330 ~i~~wd~~~~~~~-----~~~~-~h~~~~~~~~~~-----~~~---~~~~~~-------~w~~ 371 (437)
|++||+.++..+ +.+. +|.+.|.++.|+ ||| ..+++. +|++
T Consensus 598 -v~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 598 -LMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp -EEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred -EEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 789998776543 3565 999999999999 886 455443 8997
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=256.19 Aligned_cols=283 Identities=13% Similarity=0.131 Sum_probs=228.0
Q ss_pred EeeecCCCceeEEEecCCCCeEEEec-----CceEEEEEeeeccc-----cccCCCcceEEeeCCC--CCEEEEEECCCc
Q psy4571 60 KIWKKNTPFLYDLVVNNYVANISCIL-----NISILFFEIIFTQN-----FPFPLSRQDVAWHLLH--ESLFGSVADDQK 127 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~~~i~~~~-----~~~i~~~~~~~~~~-----~~~~~~v~~~~~sp~~--~~~l~~~~~dg~ 127 (437)
.+...|.+.+..+.|++....+.+.+ |+.|++||+...+. ..+...|.+++|+|++ +.+|++|+.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 44566889999999999886664333 89999999875442 3467899999999953 689999999999
Q ss_pred EEEEEcCCCCCCCCeeeeccCCCCeEEEEE------eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC----ceE
Q psy4571 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSF------NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD----EIF 197 (437)
Q Consensus 128 v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~----~v~ 197 (437)
|++||+.+.. ..+..+.+|...|.+++| +|++.. |++|+.||.|++||+++++.+...+..|.+ .+.
T Consensus 92 i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 92 LHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp EEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred EEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999998432 267888899999999965 678884 999999999999999987655777766555 799
Q ss_pred EEE----EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc---CCCeEEEEEe
Q psy4571 198 QVQ----WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP---NEPWVICSVS 270 (437)
Q Consensus 198 ~v~----~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p---~~~~~l~s~~ 270 (437)
+++ |+|+++ ++++|+.||.|++||+++... .....|...|.+++|+| ++. .+++++
T Consensus 169 ~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~---------------~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~ 231 (357)
T 3i2n_A 169 TVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL---------------RWETNIKNGVCSLEFDRKDISMN-KLVATS 231 (357)
T ss_dssp EEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE---------------EEEEECSSCEEEEEESCSSSSCC-EEEEEE
T ss_pred EEEEEeccCCCCC-EEEEEccCCeEEEEECccCce---------------eeecCCCCceEEEEcCCCCCCCC-EEEEEC
Confidence 998 678888 599999999999999988532 22457788999999999 888 788999
Q ss_pred CCCeEEEEeCCCCCCceeeee--eecccCCceeeeecCCCC-cccccCCCCcccccccccccccccccchhh--------
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRL--DSIRSNGGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDILVC-------- 339 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-------- 339 (437)
.||.|++||+++++....+.. ...+...+..++|+|++. ++++++.|+. +++||+.++
T Consensus 232 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-----------i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-----------LHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-----------EEEEEEECCSCC--CCT
T ss_pred CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-----------EEEeecCCCcccccccC
Confidence 999999999998877766542 223566777889999999 8999999998 788887754
Q ss_pred -----------hhhhhhcCCCccccccCCCCCCcccc-cc-------ccccCH
Q psy4571 340 -----------EEQRQLLGTEEESSDRHSSDNDTEDL-NS-------IWSMTD 373 (437)
Q Consensus 340 -----------~~~~~~~~h~~~~~~~~~~~~~~~~~-~~-------~w~~~~ 373 (437)
+.+..+.+|...+..+.++|++..++ +. +|++..
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 34566789999999999999998876 33 787743
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=266.19 Aligned_cols=291 Identities=9% Similarity=0.017 Sum_probs=219.7
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecC--------CCceeEEEecCCCCeEEEecCceEEEEEeeecc--ccccCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKN--------TPFLYDLVVNNYVANISCILNISILFFEIIFTQ--NFPFPL 104 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--------~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~--~~~~~~ 104 (437)
.+|.+++|+ |+|.++||+|.|++|| +.. .+.++.+.++|.+ .++.+.+|+..... ......
T Consensus 16 ~~v~sv~~S-pDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 16 DWKNNLTWA-RDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQPVC 86 (588)
T ss_dssp SSSCCEEEC-TTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSCSC
T ss_pred ccEEEEEEC-CCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCCCC
Confidence 678899999 9999999999999998 533 3445555555544 33344444433222 223467
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-----CeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-----EVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.|.+++||| ++.+||+++.||.|++||.+ . .+..+. |.. .|.+++|||+|++ |++|+.||+|++||+
T Consensus 87 ~V~~vawSP-dG~~LAs~s~dg~V~iwd~~---~--~l~~l~-~~~~~~~~sv~svafSPDG~~-LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 87 YPRVCKPSP-IDDWMAVLSNNGNVSVFKDN---K--MLTNLD-SKGNLSSRTYHCFEWNPIESS-IVVGNEDGELQFFSI 158 (588)
T ss_dssp CEEEEEECS-SSSCEEEEETTSCEEEEETT---E--EEEECC-CSSCSTTTCEEEEEECSSSSC-EEEEETTSEEEEEEC
T ss_pred cEEEEEECC-CCCEEEEEeCCCcEEEEeCC---c--eeeecc-CCCccccccEEEEEEcCCCCE-EEEEcCCCEEEEEEC
Confidence 899999999 78999999999999999965 2 555555 665 4999999999996 999999999999999
Q ss_pred CCCce------eeeEe----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cC
Q psy4571 180 RNLKL------KLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GG 248 (437)
Q Consensus 180 ~~~~~------~~~~~----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (437)
+++.. .+.++ .+|...|.+++|+|+| +++++.|+.|++||+.+.... .....+ .+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~-----------~~~~tL~~~ 224 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ-----------PVSRMIQNA 224 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC-----------CCEEEEECC
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc-----------cceeeeccc
Confidence 98642 24565 6778899999999998 678888999999999875421 112334 47
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee--cCCCCcccccCCCCcccccccc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA--SPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
|...|.+++|+ |+ .+++++ ++.|++||+.+++.. .+.. .+...+..+++ +|++..+++++.+|+ ++|..+
T Consensus 225 h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~-~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 225 SRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSIS-SLKT--GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEE-EEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEE-EEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 88899999999 56 677776 699999999976442 2221 36667788899 999999999999998 777542
Q ss_pred -------------cccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 327 -------------YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 327 -------------~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
..+.+++|+...+. ...+.+ ...+..+.++|+|..++.
T Consensus 297 ~~~~spd~~l~a~~d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 297 ELHVTADNIIAPYLEKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp SEEEECCCSSHHHHHHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEE
T ss_pred cEEECCCceEEEEcCCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEE
Confidence 13448899875444 445555 667899999999976664
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=255.68 Aligned_cols=283 Identities=14% Similarity=0.169 Sum_probs=222.0
Q ss_pred ecCCcccccceeEEEEeeCCCc-ceEEEeeccCceEeeec---------------CCCceeEEEecC-CCCeE-EEecCc
Q psy4571 26 SALPLSHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKK---------------NTPFLYDLVVNN-YVANI-SCILNI 87 (437)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~---------------~~~~~~~~~~~~-~~~~i-~~~~~~ 87 (437)
....+....+....++++ |.. .++++++.|+.|++|+. |.+.+.++.|++ ....+ ++..|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 26 EDVRVSQTTWDSGFCAVN-PKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp ESCCBCCCCCSSCSEEEC-SSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred ecceeecCccCCCcEEEC-CCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 344444555566668888 544 45567899999999983 346688999988 55555 677899
Q ss_pred eEEEEEeeecc-------c----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee--ccCCCCeEE
Q psy4571 88 SILFFEIIFTQ-------N----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNC 154 (437)
Q Consensus 88 ~i~~~~~~~~~-------~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~h~~~v~~ 154 (437)
.|++|++.... . ..+...|.+++|+|++..+|++|+.||.|++||+. ..+.+..+ .+|...|.+
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG---TGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT---TTEEEEEECTTTCCSCEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC---CCCccEEEecCCCCCceEE
Confidence 99999986542 1 13677899999999655899999999999999998 45667777 789999999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe-ccCCCc-eEEEEEcCCCCcEEEEE---eCCCeEEEEEcCCCCCC
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF-ESHKDE-IFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEE 229 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~sg---~~dg~i~vwd~~~~~~~ 229 (437)
++|+|++.. |++++.||.|++||+++++. +..+ ..|.+. +.+++|+|++. ++++| +.|+.|++||+++....
T Consensus 182 ~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 182 VDWSRDGAL-ICTSCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp EEECTTSSC-EEEEETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSC
T ss_pred EEECCCCCE-EEEEecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCC
Confidence 999999995 99999999999999999665 6666 678776 89999999987 68888 78999999999886532
Q ss_pred CCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCC
Q psy4571 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
.. .....|...+.+++|+|+++.++++|+.||.|++||+.+++. +..+.... +...+..++|+|++
T Consensus 259 ~~------------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 259 LS------------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKR 325 (402)
T ss_dssp SE------------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGG
T ss_pred ce------------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEeccc
Confidence 21 112356678999999999996556777899999999999875 44444332 45677888999999
Q ss_pred CcccccCCCCcccccccccccccccccchhhhh
Q psy4571 309 SSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 309 ~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.++++++. . +++|++.+++.
T Consensus 326 ~~~~s~~~--~-----------~~~~~l~~~~~ 345 (402)
T 2aq5_A 326 GLEVNKCE--I-----------ARFYKLHERKC 345 (402)
T ss_dssp GSCGGGTE--E-----------EEEEEEETTEE
T ss_pred ccceecce--e-----------EEEEEcCCCcE
Confidence 99887543 4 78999987654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-32 Score=249.33 Aligned_cols=237 Identities=19% Similarity=0.296 Sum_probs=199.6
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|++++|+| ++.+|++|+.||.|++|+.. ..+....+.+|...|.+++|+|++.. |++|+.|+.|++||+++
T Consensus 22 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 22 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWSSDSNL-LVSASDDKTLKIWDVSS 96 (312)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCC---CcccchhhccCCCceEEEEEcCCCCE-EEEECCCCEEEEEECCC
Confidence 567899999999 68899999999999999998 45677788899999999999999985 99999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++|+|+++ ++++|+.|+.|++||++++. .+..+..|...|.+++|+|+
T Consensus 97 ~~~-~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 97 GKC-LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGK--------------CLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp CCE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTT
T ss_pred CcE-EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCE--------------EEEEecCCCCcEEEEEEcCC
Confidence 665 778889999999999999998 59999999999999998753 34557889999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
++ ++++++.||.|++||+++++....+.. .+......++|+|+++++++++.|+. +++||+.+++.
T Consensus 161 ~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~-----------i~iwd~~~~~~ 226 (312)
T 4ery_A 161 GS-LIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLDNT-----------LKLWDYSKGKC 226 (312)
T ss_dssp SS-EEEEEETTSCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETTTE-----------EEEEETTTTEE
T ss_pred CC-EEEEEeCCCcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCCCe-----------EEEEECCCCcE
Confidence 99 788999999999999999876655432 12334556799999999999999998 89999999999
Q ss_pred hhhhcCCCccccccC---CCCCCcccccc-------ccccCH
Q psy4571 342 QRQLLGTEEESSDRH---SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~---~~~~~~~~~~~-------~w~~~~ 373 (437)
+..+.+|......+. ..+++..+++. +|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 227 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 999988876554432 22445444432 888754
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-31 Score=250.50 Aligned_cols=293 Identities=13% Similarity=0.110 Sum_probs=237.7
Q ss_pred eEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
...+..|.+.+..+.+++....+ ++..|+.|++||+...+.. .+...|.+++|+| ++.+|++++.||.|++||+
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 34467788999999999988776 5667999999997654432 3677899999999 6889999999999999999
Q ss_pred CCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCce----------eeeEeccCCC--ce
Q psy4571 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLKL----------KLHSFESHKD--EI 196 (437)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~----------~~~~~~~h~~--~v 196 (437)
. ..+.+..+. |...|.+++|+|++.. +++++.+ |.|++||++.... ....+..|.. .+
T Consensus 104 ~---~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 104 S---NGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp T---TCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred C---CCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 8 456666665 8889999999999995 9999998 9999999986432 2444555666 89
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEE
Q psy4571 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~ 276 (437)
.+++|+|+++ .+++++.||.|++||+++.. ..+..+..|...|.+++|+|+++ +|++++.|+.|+
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~ 243 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNNY-------------EYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSF 243 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTTT-------------EEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCCc-------------EeEEEEecCCCceeEEEECCCCC-EEEEecCCceEE
Confidence 9999999998 58999999999999998732 44566788999999999999999 788999999999
Q ss_pred EEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc---ccccccchhhhhhhhhcCCCcccc
Q psy4571 277 EYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ---GLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~---~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
+||+++++....+. .......++|+|++.++++++.++...++...... .+++||..+++.+..+.+|...+.
T Consensus 244 v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~ 319 (369)
T 3zwl_B 244 LVDVSTLQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLN 319 (369)
T ss_dssp EEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEECCCCceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEE
Confidence 99999988777665 45667778999999999999988754444322111 389999999999999999999999
Q ss_pred ccCCCCCCcccccc-------ccccCHHHH
Q psy4571 354 DRHSSDNDTEDLNS-------IWSMTDEQR 376 (437)
Q Consensus 354 ~~~~~~~~~~~~~~-------~w~~~~~~~ 376 (437)
.+.++|++..+++. +|++.....
T Consensus 320 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 320 TVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 99999999877764 899876543
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-32 Score=251.67 Aligned_cols=277 Identities=10% Similarity=0.024 Sum_probs=223.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
.+.-.|.+++|+ |++++|++|+.|+.|++|+..++...... .....+...|.+++|
T Consensus 9 ~h~~~v~~~~~s-~~~~~l~~~~~d~~v~iw~~~~~~~~~~~-----------------------~~~~~~~~~v~~~~~ 64 (342)
T 1yfq_A 9 APKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDL-----------------------LQSLRYKHPLLCCNF 64 (342)
T ss_dssp CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEE-----------------------EEEEECSSCEEEEEE
T ss_pred CCCCcEEEEEEc-CCCCEEEEEcCCCeEEEEEeCCCCccccc-----------------------eeeeecCCceEEEEE
Confidence 455679999999 99999999999999999997665410000 001134567899999
Q ss_pred eCCCCC-EEEEEECCCcEEEEEc-CCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC------
Q psy4571 112 HLLHES-LFGSVADDQKLMIWDT-RSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSADKTVALWDLRN------ 181 (437)
Q Consensus 112 sp~~~~-~l~~~~~dg~v~vwd~-~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~------ 181 (437)
+| ++. +|++|+.||.|++||+ ... ....+.+ |...|.+++|+| +. .|++++.|+.|++||+++
T Consensus 65 ~~-~~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 65 ID-NTDLQIYVGTVQGEILKVDLIGSP----SFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EE-SSSEEEEEEETTSCEEEECSSSSS----SEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCE
T ss_pred CC-CCCcEEEEEcCCCeEEEEEeccCC----ceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccc
Confidence 99 688 9999999999999999 732 3467778 999999999999 77 599999999999999986
Q ss_pred ---CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-CCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 182 ---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 182 ---~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.+. +..+. |...|.+++|+|++ +++++.|+.|++||++. ..... ......|...+.+++
T Consensus 138 ~~~~~~-~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~------------~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 138 AVKNLN-SNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNG------------TIEESGLKYQIRDVA 200 (342)
T ss_dssp EEEESC-SSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCC------------EEEECSCSSCEEEEE
T ss_pred cccCCe-eeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccc------------eeeecCCCCceeEEE
Confidence 443 44454 88999999999876 78899999999999987 43221 233557888999999
Q ss_pred Ecc-CCCeEEEEEeCCCeEEEEeCCCC------CCceeeeeeec------ccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 258 WNP-NEPWVICSVSEDNIMQEYCDSTD------SDTKTMRLDSI------RSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 258 ~~p-~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
|+| +++ ++++++.||.|++|+++.. +....+..... +...+..++|+|+++++++++.|+.
T Consensus 201 ~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~----- 274 (342)
T 1yfq_A 201 LLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI----- 274 (342)
T ss_dssp ECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----
T ss_pred ECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-----
Confidence 999 998 7889999999999999887 55555554221 1226677799999999999999998
Q ss_pred cccccccccccchhhhhhhhhcCC-CccccccCCCCCCccccccccc
Q psy4571 325 KNYWQGLVLFDILVCEEQRQLLGT-EEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 325 ~~~~~~i~~wd~~~~~~~~~~~~h-~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
+++||+.+++.+..+.+| ...+..+. |++..+++.-++
T Consensus 275 ------i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 275 ------ISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp ------EEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred ------EEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 899999999999999998 99999888 888877665443
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=247.75 Aligned_cols=276 Identities=18% Similarity=0.238 Sum_probs=225.4
Q ss_pred eecCCCceeEEEecCCC-CeE-EEecCceEEEEEeeeccc---------cccCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 62 WKKNTPFLYDLVVNNYV-ANI-SCILNISILFFEIIFTQN---------FPFPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~-~~i-~~~~~~~i~~~~~~~~~~---------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
...|++.+..+.|+|.. ..+ +++.|++|++||+...+. ..+...|.+++|+| ++.+|++|+.||.|++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceE
Confidence 56799999999999874 444 788999999999764331 22567899999999 7899999999999999
Q ss_pred EEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc-EE
Q psy4571 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-IL 209 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l 209 (437)
|+.. ..........+...+....+++++.. |++|+.|+.+++||+...........+|...+..++|++++.. ++
T Consensus 113 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 113 WDLT---TGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EETT---TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred Eeec---ccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 9998 45566667778889999999999995 9999999999999998866655567789999999999987533 67
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++++.|+.|++||+++. +.+..+.+|...|++++|+|+++ +|++|+.||.|++||+++.+++..+
T Consensus 189 ~s~~~d~~i~i~d~~~~--------------~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANC--------------KLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCEEEEEECCCC--------------ceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCceeeee
Confidence 89999999999999875 34566889999999999999999 8899999999999999998776665
Q ss_pred eeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh---------hcCCCccccccCCCCC
Q psy4571 290 RLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ---------LLGTEEESSDRHSSDN 360 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~---------~~~h~~~~~~~~~~~~ 360 (437)
. ....+..+.++|++.++++ +.|+. |++||+.++..+.. ..+|...+.++.++|+
T Consensus 254 ~----~~~~v~~~~~~~~~~~~~~-~~d~~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 254 D----GGDIINALCFSPNRYWLCA-ATGPS-----------IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp E----CSSCEEEEEECSSSSEEEE-EETTE-----------EEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred c----CCceEEeeecCCCCceeec-cCCCE-----------EEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 4 3455667789998876654 45677 78888776654433 3578889999999999
Q ss_pred Ccccccc-------ccccCH
Q psy4571 361 DTEDLNS-------IWSMTD 373 (437)
Q Consensus 361 ~~~~~~~-------~w~~~~ 373 (437)
|..+++. +|++..
T Consensus 318 g~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 318 GQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp SSEEEEEETTSCEEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEeCCC
Confidence 9887764 888743
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=268.89 Aligned_cols=217 Identities=12% Similarity=0.085 Sum_probs=165.2
Q ss_pred CCcceEEEeeccCceEeeecCC---------------CceeEEEecCC------CCeE-EEecCceEEEEEeeeccc---
Q psy4571 45 PFDDAVEERVINEEYKIWKKNT---------------PFLYDLVVNNY------VANI-SCILNISILFFEIIFTQN--- 99 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~---------------~~~~~~~~~~~------~~~i-~~~~~~~i~~~~~~~~~~--- 99 (437)
|++.++++++.|++|+||+..+ +.+..+.|++. ...+ +++.|++|++||+.....
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 6778899999999999999543 33566778775 2344 677899999999865421
Q ss_pred ------------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEE--EEeCCCCcEE
Q psy4571 100 ------------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL--SFNPYSEYIL 165 (437)
Q Consensus 100 ------------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l--~~~~~~~~~l 165 (437)
..+...|.+++|+| + ..|++|+.||+|++||++++. .+...+.+|...|.++ +|+|++.++|
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~l 326 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVV 326 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEE
T ss_pred cceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEE
Confidence 12456899999998 3 489999999999999998532 3455678999999999 5678773369
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEeccCCC--ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+||+.|++|+|||+++++. ...+.+|.. .|.+++|+|+++ .+++++.|++|++||++.+.. +
T Consensus 327 aS~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~--------------~ 390 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFA--------------V 390 (524)
T ss_dssp EEEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTC--------------C
T ss_pred EEeccCCeEEEEECCCCCc-ccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccccc--------------c
Confidence 9999999999999998554 555656653 588999999998 489999999999999988643 2
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
..+.+|.+.|++|+|+|+|+ +|++|+.||+|++||+..
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCS
T ss_pred eeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechH
Confidence 44678999999999999999 788999999999999754
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-31 Score=251.11 Aligned_cols=260 Identities=15% Similarity=0.203 Sum_probs=205.5
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |++++|++|+.|+.|++|+...+...... ....+...|.+++
T Consensus 8 ~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------------------------~~~~h~~~v~~~~ 62 (379)
T 3jrp_A 8 NAHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLID------------------------TLTGHEGPVWRVD 62 (379)
T ss_dssp EECCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEE------------------------EECCCSSCEEEEE
T ss_pred cCCcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeee------------------------EecCCCCcEEEEE
Confidence 4456679999999 99999999999999999997632211110 0012456789999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce-ee
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL-KL 186 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~-~~ 186 (437)
|+|. ++.+|++|+.||.|++||+.++. ...+..+..|...|.+++|+|+ +. +|++++.||.|++||+++... ..
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceee
Confidence 9873 27899999999999999998431 1266777889999999999999 77 599999999999999998632 24
Q ss_pred eEeccCCCceEEEEEcC-------------CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 187 HSFESHKDEIFQVQWSP-------------HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p-------------~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
..+..|...|.+++|+| ++. ++++|+.|+.|++||++...... ..+..+.+|...|
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~----------~~~~~~~~h~~~v 209 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTY----------VLESTLEGHSDWV 209 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEE----------EEEEEECCCSSCE
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcce----------eeEEEEecccCcE
Confidence 46678999999999999 576 69999999999999998754321 3456678999999
Q ss_pred EEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 254 SDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 254 ~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
.+++|+|+ +. ++++++.||.|++||++++......... ..+...+..++|+|+|+++++++.|+.
T Consensus 210 ~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~--------- 279 (379)
T 3jrp_A 210 RDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK--------- 279 (379)
T ss_dssp EEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS---------
T ss_pred eEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc---------
Confidence 99999999 56 8999999999999999987543332222 224456677899999999999999998
Q ss_pred cccccccchhhh
Q psy4571 329 QGLVLFDILVCE 340 (437)
Q Consensus 329 ~~i~~wd~~~~~ 340 (437)
+++||+.++.
T Consensus 280 --i~iw~~~~~~ 289 (379)
T 3jrp_A 280 --VTLWKENLEG 289 (379)
T ss_dssp --EEEEEEEETT
T ss_pred --EEEEeCCCCC
Confidence 7888877543
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=267.85 Aligned_cols=290 Identities=16% Similarity=0.185 Sum_probs=240.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCC---------------c-eeEEEecC--CCCeE-EEecCceEEEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP---------------F-LYDLVVNN--YVANI-SCILNISILFF 92 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~---------------~-~~~~~~~~--~~~~i-~~~~~~~i~~~ 92 (437)
.....|.+++|+ |+++++++++ ++.+++|+..++ . +..+.+++ ....+ ++..|+.|++|
T Consensus 16 ~~~~~v~~~~~s-pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYD-PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEE-TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEEC-CCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 345679999999 9999999998 889999995533 4 78888988 77766 66789999999
Q ss_pred Eeeec--------c---cc-ccCCCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 93 EIIFT--------Q---NF-PFPLSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 93 ~~~~~--------~---~~-~~~~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
|+..+ . .+ .+...|.+++|+| ++.+|++++.+ +.|++||. .+.+..+.+|...|.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~-----~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS-----GNSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT-----CCEEEECCSCSSCEEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEEC-----CCcceeeecCCccEEEEE
Confidence 98643 1 11 2577899999999 68889999887 68888883 356778889999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC---ceEEEEEcCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD---EIFQVQWSPH-NETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~---~v~~v~~~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
|+|++++++++++.|+.|++||+++.+. ...+..|.. .|.+++|+|+ ++ .+++++.||.|++||+++++.
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~---- 241 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSGEF---- 241 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTTCCE----
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcce-eeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCCE----
Confidence 9999986799999999999999998554 778888999 9999999999 87 599999999999999987643
Q ss_pred CCCCCCCCceEEEe-c---CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec-ccCCceeeeecCC
Q psy4571 233 EDAEDGPPELLFIH-G---GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI-RSNGGISSTASPT 307 (437)
Q Consensus 233 ~~~~~~~~~~~~~~-~---~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~s~~ 307 (437)
+..+ . +|...|.+++|+ +++ ++++++.|+.|++||+++++....+..... .......+.+ ++
T Consensus 242 ----------~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 308 (615)
T 1pgu_A 242 ----------LKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TG 308 (615)
T ss_dssp ----------EEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EE
T ss_pred ----------eEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CC
Confidence 3445 4 899999999999 888 788999999999999999887777664321 1233444455 49
Q ss_pred CCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCC
Q psy4571 308 ASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDN 360 (437)
Q Consensus 308 g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~ 360 (437)
+.++++++.++. +++||+.+++.+..+.+|...+..+.+ |+
T Consensus 309 ~~~l~~~~~~g~-----------i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 309 NGRIISLSLDGT-----------LNFYELGHDEVLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp TTEEEEEETTSC-----------EEEEETTEEEEEEEECCCSSCEEEEET-TT
T ss_pred CCeEEEEECCCC-----------EEEEECCCCcEEEEEeCCCCCEEEEEe-cC
Confidence 999999999998 788999888888888889888888888 76
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-32 Score=258.25 Aligned_cols=269 Identities=12% Similarity=0.136 Sum_probs=221.7
Q ss_pred eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc----------ccccCCCcceEEeeCCC----C---CEEEE
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ----------NFPFPLSRQDVAWHLLH----E---SLFGS 121 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~----------~~~~~~~v~~~~~sp~~----~---~~l~~ 121 (437)
.++...|.+.+..+.+++ ...++++.|+.|++|++.... ...+...|.+++|+| + + .+|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEEE
Confidence 455667889999999988 455588899999999987654 123567899999999 5 7 89999
Q ss_pred EECCCcEEEEEcCCCCCCCC-----eeeeccC-----CCCeEEEEEe----CCCCcEEEEEeCCCeEEEEeCCC------
Q psy4571 122 VADDQKLMIWDTRSHNVSKP-----SHTVDAH-----TAEVNCLSFN----PYSEYILATGSADKTVALWDLRN------ 181 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~~l~sgs~dg~i~lwd~~~------ 181 (437)
++.||.|++||+.+ ... +..+..| ...|.+++|+ |++..+|++++.||.|++||+++
T Consensus 87 ~~~dg~i~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSFSGDLLFYRITR---EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EETTSCEEEEEEEE---CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcCCCCEEEEEccC---CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999984 344 6777888 5899999999 99983399999999999999987
Q ss_pred Cceeee-----Ee-------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-
Q psy4571 182 LKLKLH-----SF-------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG- 248 (437)
Q Consensus 182 ~~~~~~-----~~-------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (437)
.+. +. .+ ..|...|.+++|+|++ ++++|+.|+.|++||+++. +.+..+..
T Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~ 226 (397)
T 1sq9_A 164 SLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL--------------RPLYNFESQ 226 (397)
T ss_dssp HTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT--------------EEEEEEECC
T ss_pred cce-eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC--------------ceeEEEecc
Confidence 443 33 55 4488999999999999 5899999999999999875 34455667
Q ss_pred --c---cccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCCceeeeeee----------cccCCceeeeecCCCCc
Q psy4571 249 --H---TAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSDTKTMRLDS----------IRSNGGISSTASPTASS 310 (437)
Q Consensus 249 --h---~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~g~~ 310 (437)
| ...|.+++|+|++. ++++++.| +.|++||+++++.+..+.... .+...+..++|+|++.+
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp C---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 8 89999999999999 78899999 999999999987776664310 04556778899999999
Q ss_pred ccccCCCCcccccccccccccccccchhhhhhhhhc------CC---------------CccccccCCCCCC
Q psy4571 311 TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL------GT---------------EEESSDRHSSDND 361 (437)
Q Consensus 311 l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~------~h---------------~~~~~~~~~~~~~ 361 (437)
+++++.|+. +++||+.+++.+..+. +| ...+..+.++|++
T Consensus 306 l~~~~~dg~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 306 LCSAGWDGK-----------LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEEEETTSE-----------EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEEEeCCCe-----------EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 999999998 8999999999988888 88 8999999999998
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-31 Score=241.93 Aligned_cols=274 Identities=18% Similarity=0.268 Sum_probs=224.6
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHES 117 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 117 (437)
.+++|+ +++ +|++| .|++|++||..++.+......+ .+...|.+++|+| +++
T Consensus 29 ~~l~WS-~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~------------------------~~~~~V~~v~~~~-~~~ 80 (318)
T 4ggc_A 29 NLVDWS-SGN-VLAVA-LDNSVYLWSASSGDILQLLQME------------------------QPGEYISSVAWIK-EGN 80 (318)
T ss_dssp BCEEEC-TTS-EEEEE-ETTEEEEEETTTCCEEEEEECC------------------------STTCCEEEEEECT-TSS
T ss_pred eEEEEC-CCC-EEEEE-eCCEEEEEECCCCCEEEEEEec------------------------CCCCeEEEEEECC-CCC
Confidence 568898 654 66665 5999999999888776543211 1345688999999 688
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceE
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 197 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~ 197 (437)
+|++|+.||+|++||++ ..+.+..+.+|...+.++.+. +. ++++|+.++.+++|+.......+..+.+|...+.
T Consensus 81 ~l~sgs~Dg~v~iw~~~---~~~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (318)
T 4ggc_A 81 YLAVGTSSAEVQLWDVQ---QQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC 154 (318)
T ss_dssp EEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred EEEEEECCCcEEEeecC---CceeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEEcCccCceE
Confidence 99999999999999999 567788899999998877665 45 5999999999999999987777888899999999
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE--EEEeCCCeE
Q psy4571 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIM 275 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l--~s~~~dg~i 275 (437)
.++++++++ .+++++.|+.|++||+++++.... .......|...|.+++++|++..++ ++++.++.|
T Consensus 155 ~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 155 GLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWV----------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEESSCBTTBSC----------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EEEEcCCCC-EEEEEecCcceeEEECCCCccccc----------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 999999998 589999999999999988654332 2344667888999999999887555 456788999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc--CCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE--SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~--s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
++||.+......... +...+....++|++..++++ +.|+. |++||+.+++.+..+.+|.+.|.
T Consensus 224 ~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~sg~~d~~-----------i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 224 RIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQ-----------LVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp EEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCC-----------EEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEeccccccccccc----ceeeeeeeeecccccceEEEEEcCCCE-----------EEEEECCCCcEEEEEcCCCCCEE
Confidence 999999876554433 45567777999999977654 46777 89999999999999999999999
Q ss_pred ccCCCCCCcccccc-------cccc
Q psy4571 354 DRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 354 ~~~~~~~~~~~~~~-------~w~~ 371 (437)
++.++|+|..++++ +|++
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEEC
Confidence 99999999988765 7876
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-32 Score=280.48 Aligned_cols=272 Identities=18% Similarity=0.243 Sum_probs=232.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |+++.+++|+.|+.|++|+..++....... .+...|.+++
T Consensus 10 ~~h~~~v~~i~~s-p~~~~la~~~~~g~v~iwd~~~~~~~~~~~--------------------------~~~~~v~~~~ 62 (814)
T 3mkq_A 10 SNRSDRVKGIDFH-PTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--------------------------VTETPVRAGK 62 (814)
T ss_dssp EEECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------------CCSSCEEEEE
T ss_pred ecCCCceEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceEEEEe--------------------------cCCCcEEEEE
Confidence 4456679999999 999999999999999999987765543321 2345788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++.+|++|+.||.|++||+. ..+.+..+.+|.+.|.+++|+|+++. |++++.||.|++||++++......+.
T Consensus 63 ~s~-~~~~l~~~~~dg~i~vw~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 63 FIA-RKNWIIVGSDDFRIRVFNYN---TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp EEG-GGTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred EeC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEEEc
Confidence 999 68899999999999999998 56778888899999999999999995 99999999999999998756677888
Q ss_pred cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc--CCCeEEE
Q psy4571 191 SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--NEPWVIC 267 (437)
Q Consensus 191 ~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~~l~ 267 (437)
+|...|.+++|+| ++. .+++++.||.|++||+........ ....|...+.+++|+| +++ +++
T Consensus 138 ~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~-~l~ 202 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTPNFT-------------LTTGQERGVNYVDYYPLPDKP-YMI 202 (814)
T ss_dssp CCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSCSEE-------------EECCCTTCCCEEEECCSTTCC-EEE
T ss_pred CCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcceeE-------------EecCCCCCEEEEEEEECCCCC-EEE
Confidence 9999999999999 665 699999999999999977543222 2234447899999999 888 788
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
+++.||.|++||+++++....+.. +...+..++|+|+|.++++++.|+. +++||..+++.+..+..
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~-----------v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGT-----------LKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSC-----------EEEEETTTCSEEEEECC
T ss_pred EEeCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCe-----------EEEEECCCCcEEEEeec
Confidence 999999999999999877666543 4556777899999999999999998 89999999999999999
Q ss_pred CCccccccCCCCCCcc
Q psy4571 348 TEEESSDRHSSDNDTE 363 (437)
Q Consensus 348 h~~~~~~~~~~~~~~~ 363 (437)
|...+..+.++|++..
T Consensus 269 ~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 269 GLERSWCIATHPTGRK 284 (814)
T ss_dssp SSSSEEEEEECTTCGG
T ss_pred CCCcEEEEEEccCCCc
Confidence 9999999999999874
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-31 Score=256.10 Aligned_cols=251 Identities=69% Similarity=1.027 Sum_probs=209.4
Q ss_pred cccceeEEEEeeCCC-cceEEEeeccCceEeeecCC---------------------CceeEEEecCCCC-eE-EEecCc
Q psy4571 32 HSIYRFYRLCVAEPF-DDAVEERVINEEYKIWKKNT---------------------PFLYDLVVNNYVA-NI-SCILNI 87 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~-~~~l~tgs~d~~v~iw~~~~---------------------~~~~~~~~~~~~~-~i-~~~~~~ 87 (437)
.+...|.+++|+ |. +.++++|+.|+.|++|+... +.+..+.|++... .+ ++..++
T Consensus 126 ~h~~~v~~l~~~-p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 126 NHEGEVNRARYM-PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EESSCCSEEEEE-TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred cCCCcEEEEEEC-CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 345679999999 65 78999999999999999542 2356677877766 44 667899
Q ss_pred eEEEEEeeecc----------c-cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 88 SILFFEIIFTQ----------N-FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 88 ~i~~~~~~~~~----------~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
.|++|++.... . ..+...|.+++|+|.++.+|++++.||.|++||++.....+.+..+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 99999976521 1 145678999999998889999999999999999996544467778889999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
|+|++.++|++|+.||.|++||+++...++..+..|...|.+++|+|+++.+|++++.|+.|++||+.............
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 364 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccc
Confidence 99999888999999999999999986666888889999999999999998789999999999999998754433222223
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.++..++....+|...|++++|+|++++++++++.||.|++|++...
T Consensus 365 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 365 DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 34457788889999999999999999988999999999999999754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-31 Score=254.37 Aligned_cols=283 Identities=17% Similarity=0.223 Sum_probs=229.8
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEecCceEEEEEeeecccc----c
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF----P 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~ 101 (437)
+.++.+ +++++++|+.|++|++|+..+ +.+..+.+.+ ...++++.|+.|++||+..++.. .
T Consensus 122 ~~~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 122 ITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-NIIISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp EEEEEE---ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-CEEEEEeCCCeEEEEECCcCcEEEEECC
Confidence 444444 588999999999999999654 3455555542 23447788999999997654432 3
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|++ ..+++|+.||.|++||+. ..+.+..+.+|...|.+++| ++.. +++|+.||.|++||+++
T Consensus 198 h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~---~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 198 HTSTVRCMHLHE---KRVVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQY--DGRR-VVSGAYDFMVKVWDPET 268 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEETTSEEEEEESS---SCCEEEEEECCSSCEEEEEE--CSSC-EEEEETTSCEEEEEGGG
T ss_pred CCCcEEEEEecC---CEEEEEeCCCEEEEEECC---CCcEEEEEcCCcccEEEEEE--CCCE-EEEEcCCCEEEEEECCC
Confidence 667899999964 579999999999999998 56778888899999999999 5664 99999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++| ++. .+++|+.|+.|++||+++++ .+..+.+|...+.++.++
T Consensus 269 ~~~-~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~--------------~~~~~~~~~~~v~~~~~~-- 328 (445)
T 2ovr_B 269 ETC-LHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGN--------------CIHTLTGHQSLTSGMELK-- 328 (445)
T ss_dssp TEE-EEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCC--------------EEEEECCCCSCEEEEEEE--
T ss_pred CcE-eEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCC--------------EEEEEcCCcccEEEEEEe--
Confidence 554 7888899999999999 566 58999999999999998863 345578899999988874
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
++ ++++|+.||.|++||+++++....+.....+...+..+++ ++.++++|+.|+. +++||+.+++.
T Consensus 329 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~-----------v~iwd~~~~~~ 394 (445)
T 2ovr_B 329 DN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGT-----------VKLWDLKTGEF 394 (445)
T ss_dssp TT-EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSE-----------EEEEETTTCCE
T ss_pred CC-EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEeCCCe-----------EEEEECCCCce
Confidence 45 7889999999999999999887777643334445555566 5789999999998 89999999998
Q ss_pred hhhh-----cCCCccccccCCCCCCccccc
Q psy4571 342 QRQL-----LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 342 ~~~~-----~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+..+ .+|...+..+.++|++..++.
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence 8877 578888999999999876554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-31 Score=248.90 Aligned_cols=295 Identities=14% Similarity=0.158 Sum_probs=226.3
Q ss_pred eeecCCCceeEEEecCCCCeEEEe-cCceEEEEEeeecc-----cc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 61 IWKKNTPFLYDLVVNNYVANISCI-LNISILFFEIIFTQ-----NF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 61 iw~~~~~~~~~~~~~~~~~~i~~~-~~~~i~~~~~~~~~-----~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
++..+.+.+..+.+++....+.+. .++.|++||....+ .+ .+...|.+++|+| ++.+|++++.||.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEEC
Confidence 455678889999999998877544 89999999987553 12 3677899999999 7889999999999999999
Q ss_pred CCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEE
Q psy4571 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILA 210 (437)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~ 210 (437)
.+.+ ......+..|...|.+++|+|++.. |++|+.||.|++||++.... .......|...|.+++|+|+++ .++
T Consensus 82 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 158 (372)
T 1k8k_C 82 KGRT-WKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLA 158 (372)
T ss_dssp ETTE-EEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEE
T ss_pred CCCe-eeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEE
Confidence 7431 1223344678999999999999985 99999999999999998652 2333467899999999999998 589
Q ss_pred EEeCCCeEEEEEcCCCCCCCCCCC----CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 211 SSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 211 sg~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
+|+.||.|++||++.......... ......+.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+++++.+
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcee
Confidence 999999999999865432211000 00112356677889999999999999999 7889999999999999999877
Q ss_pred eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh--h-------------------------
Q psy4571 287 KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV--C------------------------- 339 (437)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~--~------------------------- 339 (437)
..+.. +...+..++|+|++.++++| .|+. +++||+.+ +
T Consensus 238 ~~~~~---~~~~v~~~~~~~~~~~l~~~-~d~~-----------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 238 ATLAS---ETLPLLAVTFITESSLVAAG-HDCF-----------PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp EEEEC---SSCCEEEEEEEETTEEEEEE-TTSS-----------CEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred EEEcc---CCCCeEEEEEecCCCEEEEE-eCCe-----------EEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 77653 44567788999999999988 7787 55666555 2
Q ss_pred -------hhh------hhh-cCCCccccccCCC-CCC---cccccc-------ccccCHHH
Q psy4571 340 -------EEQ------RQL-LGTEEESSDRHSS-DND---TEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 340 -------~~~------~~~-~~h~~~~~~~~~~-~~~---~~~~~~-------~w~~~~~~ 375 (437)
+.. ..+ .+|...+.++.+. ++| ..+++. +|++...+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 111 233 4999999999744 666 666654 88885543
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=263.94 Aligned_cols=221 Identities=14% Similarity=0.187 Sum_probs=180.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
++...|+|++|+|.++.+||+|+.||.|+|||+...+ ......+.+|.+.|++++|+|.+..+|++|+.||+|++||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 3556799999999888899999999999999998542 234455678999999999998543369999999999999998
Q ss_pred CCceeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 181 NLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 181 ~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+... ..... .+...+.+++|+|++. +|++|+.||.|++||++.. . +..+.+|...|.+++|
T Consensus 196 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~-~--------------~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 196 GNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGK-E--------------LWNLRMHKKKVTHVAL 258 (435)
T ss_dssp SCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSC-B--------------CCCSBCCSSCEEEEEE
T ss_pred CCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcc-e--------------eEEEecccceEEeeee
Confidence 7432 22222 2345678999999998 5999999999999998652 1 2336789999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++.++++|+.|+.|++||+++.+....+.....|...+..++|+|+|.+|++++.|+. |++||+.+
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-----------i~iwd~~~ 327 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-----------IRVYSASQ 327 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-----------EEEEESSS
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-----------EEEEECCC
Confidence 9999888999999999999999988776666554456677788899999999999999999 89999988
Q ss_pred hhhhhhhcCCCc
Q psy4571 339 CEEQRQLLGTEE 350 (437)
Q Consensus 339 ~~~~~~~~~h~~ 350 (437)
++....+.+|..
T Consensus 328 ~~~~~~~~~~~~ 339 (435)
T 4e54_B 328 WDCPLGLIPHPH 339 (435)
T ss_dssp SSSEEEECCCCC
T ss_pred CccceEEecccc
Confidence 887777766543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=254.19 Aligned_cols=272 Identities=15% Similarity=0.256 Sum_probs=214.9
Q ss_pred EecCCCCeE--EEecCceEEEEEeeeccc--------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC---
Q psy4571 73 VVNNYVANI--SCILNISILFFEIIFTQN--------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS--- 139 (437)
Q Consensus 73 ~~~~~~~~i--~~~~~~~i~~~~~~~~~~--------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~--- 139 (437)
.+++....+ ++..+|.|.+|++..... ..+...|.+++|+|.++.+|++|+.||.|++||+.+....
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc
Confidence 344444333 346789999999743221 1367789999999977889999999999999999854211
Q ss_pred -CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe--ccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 140 -KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF--ESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 140 -~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
.++..+.+|...|.+++|+|++..+|++|+.||.|++||+++++. +..+ ..|...|.+++|+|+++. |++++.||
T Consensus 121 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~ 198 (402)
T 2aq5_A 121 REPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDGAL-ICTSCRDK 198 (402)
T ss_dssp CSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTSSC-EEEEETTS
T ss_pred CCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCCCE-EEEEecCC
Confidence 567788899999999999999865799999999999999998655 6777 789999999999999985 89999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCcccc-EEEEEEccCCCeEEEEE---eCCCeEEEEeCCCCCCceeeee
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAK-ISDFSWNPNEPWVICSV---SEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.|++||++++. .+..+ .+|.+. +.++.|+|++. ++++| +.|+.|++||+++++.......
T Consensus 199 ~i~iwd~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 263 (402)
T 2aq5_A 199 RVRVIEPRKGT--------------VVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQE 263 (402)
T ss_dssp EEEEEETTTTE--------------EEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEE
T ss_pred cEEEEeCCCCc--------------eeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEe
Confidence 99999998753 33445 677765 89999999988 78888 7999999999998765222221
Q ss_pred eecccCCceeeeecCCCCccc-ccCCCCcccccccccccccccccchhhhh-hhhhcC--CCccccccCCCCCCcccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDILVCEE-QRQLLG--TEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~~~~~-~~~~~~--h~~~~~~~~~~~~~~~~~~~ 367 (437)
..+...+..++|+|++.+++ +|+.|+. |++||+.+++. +..+.+ |...+..+.++|++..++..
T Consensus 264 -~~~~~~v~~~~~s~~~~~l~~~g~~dg~-----------i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 264 -LDTSSGVLLPFFDPDTNIVYLCGKGDSS-----------IRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp -CCCCSSCEEEEEETTTTEEEEEETTCSC-----------EEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG
T ss_pred -ccCCCceeEEEEcCCCCEEEEEEcCCCe-----------EEEEEecCCCcceEeecccccCCcccceEEecccccceec
Confidence 12445677889999999886 5667888 89999998875 445544 45889999999999877654
Q ss_pred -----ccccCH
Q psy4571 368 -----IWSMTD 373 (437)
Q Consensus 368 -----~w~~~~ 373 (437)
+|++..
T Consensus 332 ~~~~~~~~l~~ 342 (402)
T 2aq5_A 332 CEIARFYKLHE 342 (402)
T ss_dssp TEEEEEEEEET
T ss_pred ceeEEEEEcCC
Confidence 788754
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=251.37 Aligned_cols=271 Identities=10% Similarity=0.073 Sum_probs=206.4
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc---
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF--- 100 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~--- 100 (437)
.+.++++..+++++|++|+.|+.|++|+. |.+.+..+.|++....+ +++.|+.|++||+...+..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 55555444499999999999999999993 45668888898887766 6778999999997654432
Q ss_pred -ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc---CCCCeEEEE--------------------
Q psy4571 101 -PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA---HTAEVNCLS-------------------- 156 (437)
Q Consensus 101 -~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~---h~~~v~~l~-------------------- 156 (437)
.+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.. |...|.+++
T Consensus 178 ~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 178 IGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG---TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp ECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT---TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred cCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC---CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 3678899999999 68899999999999999998 4455555553 444555555
Q ss_pred -EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 157 -FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 -~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
|+|++.. |++|+.||.|++||+++++........|...|.+++|+|+++.+|++|+.||.|++||++++...
T Consensus 254 ~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~------ 326 (420)
T 3vl1_A 254 EFGTYGKY-VIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP------ 326 (420)
T ss_dssp CSSCTTEE-EEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC------
T ss_pred EEcCCCCE-EEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc------
Confidence 4678884 99999999999999999776444455688999999999999856999999999999999886431
Q ss_pred CCCCCceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee------eeecccCCceeeeecCCC
Q psy4571 236 EDGPPELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR------LDSIRSNGGISSTASPTA 308 (437)
Q Consensus 236 ~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~s~~g 308 (437)
+..+.+ |...|.++.+ |+++ ++++++.|+.|++||+........+. ....+...+..++|+|++
T Consensus 327 -------~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 327 -------VGEFLINEGTPINNVYF-AAGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp -------SEEEEESTTSCEEEEEE-ETTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred -------hhhhhccCCCCceEEEe-CCCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 223444 6778888855 5666 78899999999999998753322111 122345567778999999
Q ss_pred C---cccccCCCCcccccccccccccccccch
Q psy4571 309 S---STASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 309 ~---~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
. .+++.+.++. +.+|++.
T Consensus 398 ~~~g~l~a~g~~g~-----------~~~~~~~ 418 (420)
T 3vl1_A 398 ESNGEVLEVGKNNF-----------CALYNLS 418 (420)
T ss_dssp SSSCEEEEEETTTE-----------EEEEESC
T ss_pred CCcceEEEEcCCce-----------EEEEecc
Confidence 9 4555555666 6777764
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=246.63 Aligned_cols=264 Identities=15% Similarity=0.166 Sum_probs=205.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCcee-EEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY-DLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
-+.-.|.+++|+ |++++|++|+.|+.|++|+..++... ... .....+...|.+++
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----------------------~~~~~~~~~v~~~~ 64 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELS-----------------------DSWRAHDSSIVAID 64 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEE-----------------------EEEECCSSCEEEEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceec-----------------------ceeccCCCcEEEEE
Confidence 345679999999 99999999999999999997653211 000 00012456889999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCC------CCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCC
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVS------KPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~------~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~ 181 (437)
|+|. ++.+|++|+.||.|++||+..+... +.+..+.+|...|.+++|+|+ +. +|++++.||.|++||+++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALE 143 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSS
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCC
Confidence 9995 4789999999999999999854211 346777899999999999999 88 499999999999999987
Q ss_pred CceeeeEe-------------ccCCCceEEEEEcCC---CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 182 LKLKLHSF-------------ESHKDEIFQVQWSPH---NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 182 ~~~~~~~~-------------~~h~~~v~~v~~~p~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++. +..+ ..|...+.+++|+|+ +. .+++++.|+.+.+|+...... ..+..
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~------------~~~~~ 209 (351)
T 3f3f_A 144 PSD-LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKL------------HVAAK 209 (351)
T ss_dssp TTC-TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCE------------EEEEE
T ss_pred hHH-hccccccccccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCce------------eeeee
Confidence 653 2222 257889999999997 66 699999999998887766432 33566
Q ss_pred ecCccccEEEEEEccCCC---eEEEEEeCCCeEEEEeCCCCCCc------------------------------------
Q psy4571 246 HGGHTAKISDFSWNPNEP---WVICSVSEDNIMQEYCDSTDSDT------------------------------------ 286 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~---~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 286 (437)
+.+|...|++++|+|++. .++++++.||.|++||++.+...
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 789999999999999982 38999999999999999875221
Q ss_pred -------eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 287 -------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 287 -------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
..+.....+...+..++|+|++++|++++.|+. |++||+.+++....+
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-----------v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK-----------VRLWKATYSNEFKCM 344 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSC-----------EEEEEECTTSCEEEE
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCc-----------EEEEecCcCcchhhe
Confidence 122222335566778899999999999999999 899999887655443
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=254.53 Aligned_cols=253 Identities=12% Similarity=0.125 Sum_probs=193.8
Q ss_pred EeeecCCCceeEEEecCCCCeEEE-ecCceEEEEEeeec--cc---c-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEE
Q psy4571 60 KIWKKNTPFLYDLVVNNYVANISC-ILNISILFFEIIFT--QN---F-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWD 132 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~~~i~~-~~~~~i~~~~~~~~--~~---~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd 132 (437)
.++..+.+.+..+.+++....+.+ ..|+.|++||+... +. + .+...|.+++|+| ++.+|++|+.||.|++||
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC-
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 455556678889999998887754 48999999998754 22 1 3567899999999 678999999999999999
Q ss_pred cCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce--eeeEecc-CCCceEEEEEcCCCCcEE
Q psy4571 133 TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHSFES-HKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 133 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~~l 209 (437)
+.+.........+.+|...|.+++|+|++.. |++|+.|+.|++||+++.+. ....+.. |...|.+++|+|+++ +|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 161 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LL 161 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EE
Confidence 9855334467778899999999999999995 99999999999999998652 3556666 999999999999998 59
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCC----CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAED----GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
++|+.|+.|++||++............. ...+++..+ +|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTS
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCC
Confidence 9999999999999975443222111111 112345556 8999999999999999 788999999999999999887
Q ss_pred ----ceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 286 ----TKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 286 ----~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+..+.. +...+..++|+|+|+++++++.++.+
T Consensus 240 ~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 240 PPRALITVKL---SQLPLRSLLWANESAIVAAGYNYSPI 275 (377)
T ss_dssp CEEECCCEEC---SSSCEEEEEEEETTEEEEEESSSSEE
T ss_pred cceeeEeecC---CCCceEEEEEcCCCCEEEEEcCCcEE
Confidence 444443 45567788999999999999887763
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=260.89 Aligned_cols=276 Identities=11% Similarity=0.126 Sum_probs=210.2
Q ss_pred eeCCCcceEEEee---cc-CceEee-ecCCCceeEEEecC-CCCeE-EEecCceEEEEEeee---c------cccccCCC
Q psy4571 42 VAEPFDDAVEERV---IN-EEYKIW-KKNTPFLYDLVVNN-YVANI-SCILNISILFFEIIF---T------QNFPFPLS 105 (437)
Q Consensus 42 ~~~~~~~~l~tgs---~d-~~v~iw-~~~~~~~~~~~~~~-~~~~i-~~~~~~~i~~~~~~~---~------~~~~~~~~ 105 (437)
|. |++..+++++ .+ ..+..+ ..|.+.+..+.+++ ....+ +++.|+.|++||+.. . ..+.+...
T Consensus 35 f~-~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~ 113 (437)
T 3gre_A 35 FG-PIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSST 113 (437)
T ss_dssp GC-CCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSC
T ss_pred cC-CccccccccccccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCC
Confidence 44 6666666553 11 223334 56788999999999 66655 777899999999765 2 22346789
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec----------c--CCCCeEEEE--EeCCCCcEEEEEeCC
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD----------A--HTAEVNCLS--FNPYSEYILATGSAD 171 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~----------~--h~~~v~~l~--~~~~~~~~l~sgs~d 171 (437)
|.+++|+| ++.+|++|+.||.|++||++.....+....+. . +...+.++. +++++. +|++|+.|
T Consensus 114 v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d 191 (437)
T 3gre_A 114 VTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNL 191 (437)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETT
T ss_pred EEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCC
Confidence 99999999 78899999999999999995211223332222 1 556677777 557787 59999999
Q ss_pred CeEEEEeCCCCceeeeEecc--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-C
Q psy4571 172 KTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-G 248 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~ 248 (437)
|.|++||+++++. +..+.. |...|++++|+|+++ +|++|+.||.|++||++.+. .+..+. .
T Consensus 192 ~~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~ 255 (437)
T 3gre_A 192 SRVIIFDIRTLER-LQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNV--------------LIRSWSFG 255 (437)
T ss_dssp SEEEEEETTTCCE-EEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTE--------------EEEEEBCT
T ss_pred CeEEEEeCCCCee-eEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCcc--------------EEEEEecC
Confidence 9999999999665 777777 889999999999998 59999999999999998753 334444 7
Q ss_pred ccccEEEEEEcc----CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee-----------------------cccCCcee
Q psy4571 249 HTAKISDFSWNP----NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-----------------------IRSNGGIS 301 (437)
Q Consensus 249 h~~~v~~l~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------------~~~~~~~~ 301 (437)
|...|.+++|+| ++. ++++|+.||.|++||++++++...+.... .+...+..
T Consensus 256 ~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp TCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred CCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence 778999997765 455 88999999999999999988776665321 02333556
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
++|+ ++.++++|+.|+. |++||+.+++....+.+|.
T Consensus 335 l~~~-~~~~l~s~~~d~~-----------i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 335 ISVS-NDKILLTDEATSS-----------IVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp EEEE-TTEEEEEEGGGTE-----------EEEEETTCGGGCEEEECC-
T ss_pred EEEC-CceEEEecCCCCe-----------EEEEECCCcccceEEeccc
Confidence 6788 7789999999998 8999999999988888864
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-30 Score=247.72 Aligned_cols=251 Identities=17% Similarity=0.261 Sum_probs=190.9
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
..|.+++|+ |++++|++|+.|+.+++|+..++...... ..+...|.+++|++
T Consensus 135 ~~v~~v~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------------------------~~~~~~v~~~~~~~- 186 (401)
T 4aez_A 135 TYVASVKWS-HDGSFLSVGLGNGLVDIYDVESQTKLRTM--------------------------AGHQARVGCLSWNR- 186 (401)
T ss_dssp CCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------CCCSSCEEEEEEET-
T ss_pred CCEEEEEEC-CCCCEEEEECCCCeEEEEECcCCeEEEEe--------------------------cCCCCceEEEEECC-
Confidence 345666666 56666666666666666665544332211 13456788999954
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+|++|+.||.|++||++.. ......+.+|.+.|.+++|+|++.. |++|+.||.|++||+++... ...+..|..
T Consensus 187 --~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~ 260 (401)
T 4aez_A 187 --HVLSSGSRSGAIHHHDVRIA--NHQIGTLQGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWDARSSIP-KFTKTNHNA 260 (401)
T ss_dssp --TEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCSSE-EEEECCCSS
T ss_pred --CEEEEEcCCCCEEEEecccC--cceeeEEcCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEccCCCCCc-cEEecCCcc
Confidence 69999999999999999842 3567788899999999999999984 99999999999999998554 777888999
Q ss_pred ceEEEEEcCCCCcEEEEEe--CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE--Ee
Q psy4571 195 EIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS--VS 270 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s--~~ 270 (437)
.|.+++|+|++..++++|+ .|+.|++||++++.. +..+ .+...|.+++|+|+++ .+++ |+
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--------------~~~~-~~~~~v~~~~~s~~~~-~l~~~~g~ 324 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--------------VNTV-DAGSQVTSLIWSPHSK-EIMSTHGF 324 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--------------EEEE-ECSSCEEEEEECSSSS-EEEEEECT
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--------------EEEE-eCCCcEEEEEECCCCC-eEEEEeec
Confidence 9999999999888888876 799999999987643 2334 3567899999999999 5556 44
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
.||.|++||+.+++........ .+...+..++|+|+|.++++++.|+. +++||+.+++.+.....
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~~dg~-----------i~iw~~~~~~~~~~~~~ 389 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAASDEN-----------LKFWRVYDGDHVKRPIP 389 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEECTTSE-----------EEEEECCC---------
T ss_pred CCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEeCCCc-----------EEEEECCCCcccccccc
Confidence 8999999999987655544332 35567788899999999999999998 89999999988766543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=251.57 Aligned_cols=245 Identities=20% Similarity=0.234 Sum_probs=192.6
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+| ++.+|++|+.|++|++||+.++. ...+..+.+|.++|.+++|+|+ +. +|++|+.|++|++||
T Consensus 11 ~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 11 SHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWR 87 (316)
T ss_dssp ---CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEEC
T ss_pred cccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEEE
Confidence 4667899999999 68899999999999999997431 1346778899999999999863 66 499999999999999
Q ss_pred CCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
++++. .+...+.+|...|.+++|+|+ +. +|++|+.|+.|++||++..... .....+.+|...|.+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~-----------~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQW-----------EVKKINNAHTIGCNA 155 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCE-----------EECCBTTSSSSCBCC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCc-----------ceeeeeccccCCcce
Confidence 99754 335677889999999999998 65 5999999999999999875311 112235688899999
Q ss_pred EEEccCC-----------------CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC----Cccccc
Q psy4571 256 FSWNPNE-----------------PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA----SSTASE 314 (437)
Q Consensus 256 l~~~p~~-----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~s~ 314 (437)
++|+|++ . +|++|+.|+.|++||++.............|...+..++|+|++ .+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 9999973 4 78899999999999997653322222223355667888999997 789999
Q ss_pred CCCCcccccccccccccccccchhhh----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCE----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+.|++ +++||+.++. ....+.+|.+.+..+.|+|++..+++. +|+..
T Consensus 235 s~D~~-----------v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGR-----------VFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCE-----------EEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCe-----------EEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999 7888876631 223457788999999999999887764 78764
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-30 Score=253.57 Aligned_cols=252 Identities=12% Similarity=0.167 Sum_probs=192.1
Q ss_pred CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc---------------cccC------------CCcceEEeeCCCC-
Q psy4571 66 TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN---------------FPFP------------LSRQDVAWHLLHE- 116 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~---------------~~~~------------~~v~~~~~sp~~~- 116 (437)
.+.+..+.|++.+..+ ++..|+.|++|++..... ..+. ..|.+++|+|+++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 4778999999988877 556799999999764431 1244 7799999999533
Q ss_pred CEEEEEECCCcEEEEEcCCCCCC------------------------------------CCeee-eccCCCCeEEEEEeC
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVS------------------------------------KPSHT-VDAHTAEVNCLSFNP 159 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~l~~~~ 159 (437)
..|++++.||.|++||+...... .+... ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 78999999999999998742110 00112 368999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeee-------EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLH-------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~-------~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
++.. |++| .|+.|++||+++...... .+.+|...|++++|+|++..+|++|+.||.|++||++++.....
T Consensus 188 ~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~- 264 (447)
T 3dw8_B 188 DYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR- 264 (447)
T ss_dssp TSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT-
T ss_pred CCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc-
Confidence 9995 8888 899999999995444343 35689999999999999834799999999999999998754211
Q ss_pred CCCCCCCCceEEEecCccc------------cEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccC--
Q psy4571 233 EDAEDGPPELLFIHGGHTA------------KISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSN-- 297 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~------------~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~-- 297 (437)
.+..+.+|.. .|.+++|+|+++ +|++++. +.|++||+++ ++++..+..+.....
T Consensus 265 ---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 265 ---------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp ---------TCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred ---------eeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 1234555554 899999999999 7878888 9999999997 777777765321111
Q ss_pred ----------CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 298 ----------GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 298 ----------~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
....++|+|+|.+|++|+.|+. |++||+.+++.+
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-----------v~iwd~~~~~~~ 377 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-----------FRMFDRNTKRDI 377 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-----------EEEEETTTCCEE
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCE-----------EEEEEcCCCcce
Confidence 0223799999999999999999 788888887654
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.2e-30 Score=245.79 Aligned_cols=302 Identities=19% Similarity=0.250 Sum_probs=228.2
Q ss_pred ceEeeecCCCceeEEEecC-CCCeE-EEecCceEEEEEeeecccc-----------------ccCCCcceEEeeCCCCCE
Q psy4571 58 EYKIWKKNTPFLYDLVVNN-YVANI-SCILNISILFFEIIFTQNF-----------------PFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~-~~~~i-~~~~~~~i~~~~~~~~~~~-----------------~~~~~v~~~~~sp~~~~~ 118 (437)
..++...|.+.+..+.+++ ....+ ++..|+.|++||+...... .+...|.+++|+|.++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3455567889999999998 77666 6678999999997654321 267789999999977889
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc--EEEEEeCCCeEEEEeCCCCceeeeEeccCCCce
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~--~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v 196 (437)
|++++.||.|++||+. ..+....+. +...+.++.|+|.+.. ++++|+.||.|++||+++++. +..+..|...|
T Consensus 115 l~s~~~d~~i~iwd~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~v 189 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTN---TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQEI 189 (408)
T ss_dssp EEEEETTSEEEEEETT---TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEECCCCSCE
T ss_pred EEEEeCCCeEEEeeCC---CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeeecCCCCcE
Confidence 9999999999999998 444555543 7788999999985431 599999999999999998655 77888999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
.+++|+|++++++++|+.||.|++||++............. ..........+|...|.+++|+|+++ ++++++.||.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~ 268 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNR 268 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCe
Confidence 99999999987799999999999999988653222111000 01111222467889999999999999 7889999999
Q ss_pred EEEEeCCCCCCceeeeeeec--ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccc
Q psy4571 275 MQEYCDSTDSDTKTMRLDSI--RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEES 352 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~ 352 (437)
|++||+++++.......... .............+..++.++.++. +++||+.+++.+..+.+|...+
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGST-----------IAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTE-----------EEEEETTTCCEEEEECCCSSCE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCE-----------EEEEECcCCcceeeeccCCCeE
Confidence 99999999876554432111 1111122222334455555666666 8999999999999999999999
Q ss_pred cccCCCCCCcccccc-------ccccCHHHH
Q psy4571 353 SDRHSSDNDTEDLNS-------IWSMTDEQR 376 (437)
Q Consensus 353 ~~~~~~~~~~~~~~~-------~w~~~~~~~ 376 (437)
..+.++|++..+++. +|++...+.
T Consensus 338 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 999999999877764 899855443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=256.45 Aligned_cols=320 Identities=12% Similarity=0.082 Sum_probs=201.2
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCce-------eEEEecCCCCeEEEecCceEEEEEeeecccc
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL-------YDLVVNNYVANISCILNISILFFEIIFTQNF 100 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~-------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~ 100 (437)
.|+...+|.+..+.+. |+...++..+.|+.|++|+...... ....+. +..........|+.......
T Consensus 12 lpl~~~p~~~~w~~~~-~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 85 (393)
T 4gq1_A 12 LPLNVRPYTTTWCSQS-PSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFT-----IQTGLPTLHLSFSSSCSYSE 85 (393)
T ss_dssp CCTTCCEEEEEECTTS-GGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEE-----EECSSCEEEEEECTTCEEEC
T ss_pred ecCCCCCeEEEEeCCC-CCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEE-----EecCCCeeeEeecCCccccc
Confidence 4566667766655555 5555555666788999998432111 000000 00000001111221111111
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC--CCeeeeccCCCCeEEEEEeC--------CCCcEEEEEeC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS--KPSHTVDAHTAEVNCLSFNP--------YSEYILATGSA 170 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~--------~~~~~l~sgs~ 170 (437)
........+.+.|.++.++++|+.|++|++||.+.++.. ..+..+.+|.+.|++++|+| +++ +|++|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGD 164 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEET
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEEC
Confidence 112223333344436789999999999999999843211 23345679999999999998 667 6999999
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC-----------
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP----------- 239 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~----------- 239 (437)
|++|+|||+++... ...+..|..+|.+++|+|++..+|++|+.|++|++||++++.............
T Consensus 165 D~tv~~Wd~~~~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 165 DCTLIIWRLTDEGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TSEEEEEEEETTEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCeEEEEECCCCce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 99999999988555 666778999999999999987679999999999999999876544322111110
Q ss_pred CceEEEecCccccEEEEEEc-cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec---------------ccCCceeee
Q psy4571 240 PELLFIHGGHTAKISDFSWN-PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---------------RSNGGISST 303 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~ 303 (437)
........+|...+.++.|+ |++. .+++++.|+.+++||+..++....+..... .........
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCE
T ss_pred ceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEE
Confidence 01112345788889999987 7888 788999999999999988765544432110 111122233
Q ss_pred ecC--CCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 304 ASP--TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 304 ~s~--~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++| ++.++++|+.|+. |++||+.+++....+.+|...|..++|+|+|+.++..
T Consensus 323 ~~~~~~~~~~~sgs~Dg~-----------V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGL-----------IQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ECSSCTTEEEEEETTTTE-----------EEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred EccCCCCEEEEEECCCCE-----------EEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 433 4557788888988 8999999999999899999999999999999988765
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=244.67 Aligned_cols=257 Identities=14% Similarity=0.166 Sum_probs=188.6
Q ss_pred ccceeEEEEeeCC-CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 33 SIYRFYRLCVAEP-FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 33 ~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
+...|.+++|+ | ++..+++++.|+.+++|+..+..+..+.. ...+...|.+++|
T Consensus 117 h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------------~~~~~~~v~~~~~ 171 (383)
T 3ei3_B 117 PGDAITGMKFN-QFNTNQLFVSSIRGATTLRDFSGSVIQVFAK------------------------TDSWDYWYCCVDV 171 (383)
T ss_dssp TTCBEEEEEEE-TTEEEEEEEEETTTEEEEEETTSCEEEEEEC------------------------CCCSSCCEEEEEE
T ss_pred cCCceeEEEeC-CCCCCEEEEEeCCCEEEEEECCCCceEEEec------------------------cCCCCCCeEEEEE
Confidence 44567778887 6 66788888888888888876433222210 0123467899999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---eeeeE
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---LKLHS 188 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---~~~~~ 188 (437)
+| ++.+|++|+.||.|++||+. .+.+..+.+|...|.+++|+|+++++|++|+.|+.|++||+++.+ .++..
T Consensus 172 ~~-~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 172 SV-SRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp ET-TTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred CC-CCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 99 68899999999999999995 467788889999999999999998669999999999999999732 22444
Q ss_pred eccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC---CceEEEecCccccEEEEEEccCCCe
Q psy4571 189 FESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP---PELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
+ +|...|.+++|+| ++. +|++++.|+.|++||+++.............. ...+...-.....+..++|+|+++
T Consensus 247 ~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~- 323 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ- 323 (383)
T ss_dssp E-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-
T ss_pred e-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc-
Confidence 4 6999999999999 888 58999999999999999876654422110000 000000001123556677888887
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee-eecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS-TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+ +++.|+.|++||+.+++.+..+... .+.+.+.. +|+|+|.+|++++ |+. |++||+.+
T Consensus 324 ~--s~s~d~~i~iwd~~~~~~~~~l~~~--~~~~~~~~~~~s~~g~~l~s~s-d~~-----------i~iw~~~~ 382 (383)
T 3ei3_B 324 L--LLNDKRTIDIYDANSGGLVHQLRDP--NAAGIISLNKFSPTGDVLASGM-GFN-----------ILIWNRED 382 (383)
T ss_dssp T--CTTCCCCEEEEETTTCCEEEEECBT--TBCSCCCEEEECTTSSEEEEEE-TTE-----------EEEEECC-
T ss_pred c--ccCCCCeEEEEecCCCceeeeecCC--CCCceEEEEEEecCccEEEEec-CCc-----------EEEEecCC
Confidence 3 7889999999999999887766532 23444554 9999999999997 787 78888754
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=267.18 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=203.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC--CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV--SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+|+++.+|++|+.||+|++||+..... ......+.+|...|.+++|+|++.. |++|+.||+|++||
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF-ALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEE
Confidence 47789999999997788999999999999999975432 2234678899999999999999995 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+.++.. ...+.+|...|.+++|+|+++. |++|+.|++|++||+....... ......+|...|.+++|
T Consensus 459 ~~~~~~-~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~-----------~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 459 LAAGVS-TRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYT-----------ISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp TTTTEE-EEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEE-----------ECSSTTSCSSCEEEEEE
T ss_pred CCCCcc-eeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCccee-----------eccCCCCCCCcEEEEEE
Confidence 998655 7788899999999999999985 8999999999999986532110 00112578899999999
Q ss_pred ccCCC-eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 259 NPNEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 259 ~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+|++. ..+++++.|+.|++||+++++....+.. |...+..++|+|+|+++++|+.|+. |++||+.
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~-----------i~iwd~~ 591 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGV-----------VLLWDLA 591 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSB-----------CEEEETT
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCe-----------EEEEECC
Confidence 99873 3789999999999999998876665543 5566778899999999999999999 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCcccccc------ccccCH
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLNS------IWSMTD 373 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~------~w~~~~ 373 (437)
+++.+..+..+. .+..+.++|++..++.. +|++..
T Consensus 592 ~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 592 EGKKLYSLEANS-VIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp TTEEEECCBCSS-CEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CCceEEEecCCC-cEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 999888877654 68889999998776653 888754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=244.86 Aligned_cols=264 Identities=17% Similarity=0.260 Sum_probs=202.2
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEecCceEEEEEeeecccc---
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF--- 100 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--- 100 (437)
-.|+++.| +++.+++|+.|++|++|+..+ +.+..+.+ .....+++..|+.|++||+..++..
T Consensus 134 ~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 134 KGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred CcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 45666665 588999999999999999544 44555555 2223346778999999998755432
Q ss_pred -ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 101 -PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 101 -~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+...|.+++|++ +.+++|+.||.|++||+.+.........+.+|...|.+++| ++. .+++|+.||.|++||+
T Consensus 210 ~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 210 IHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIKVWNT 283 (435)
T ss_dssp CCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEET
T ss_pred cCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEEC
Confidence 3567899999975 58999999999999999854333333677899999999999 466 4999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
++++. +..+.+|...|.+++++ ++ .+++|+.||.|++||++++. .+..+.+|...|.+++|
T Consensus 284 ~~~~~-~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~- 344 (435)
T 1p22_A 284 STCEF-VRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGA--------------CLRVLEGHEELVRCIRF- 344 (435)
T ss_dssp TTCCE-EEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEC-
T ss_pred CcCcE-EEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCC--------------EEEEEeCCcCcEEEEEe-
Confidence 99665 88888999999999995 44 69999999999999998863 45568899999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCC---------CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDS---------DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++. .+++|+.||.|++||++++. +...+ ..+...+..++| ++..+++++.|+.
T Consensus 345 -~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~--~~~~l~s~s~Dg~----------- 406 (435)
T 1p22_A 345 -DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL---VEHSGRVFRLQF--DEFQIVSSSHDDT----------- 406 (435)
T ss_dssp -CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE---CCCSSCCCCEEE--CSSCEEECCSSSE-----------
T ss_pred -cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeec---cCCCCCeEEEEe--CCCEEEEEeCCCE-----------
Confidence 566 78999999999999997665 22332 234455666666 8899999999999
Q ss_pred cccccchhhhhhhhh
Q psy4571 331 LVLFDILVCEEQRQL 345 (437)
Q Consensus 331 i~~wd~~~~~~~~~~ 345 (437)
|++||+.++......
T Consensus 407 i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 407 ILIWDFLNDPAAQAE 421 (435)
T ss_dssp EEEEC----------
T ss_pred EEEEECCCCCCcccC
Confidence 899999887654433
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=244.40 Aligned_cols=245 Identities=11% Similarity=0.036 Sum_probs=183.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
++.....++. +++.++++|+.|++|++|+..++....... ...|.++.|+|
T Consensus 36 ~~~~~~~~~~-~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----------------------------~~~v~~~~~~~ 86 (343)
T 3lrv_A 36 PYKELNKSMY-YDKWVCMCRCEDGALHFTQLKDSKTITTIT----------------------------TPNPRTGGEHP 86 (343)
T ss_dssp CEEEECSSSS-EEEEEEEEEEETTEEEEEEESSSSCEEEEE----------------------------EECCCTTCCCC
T ss_pred Chhhhhhhhc-CCCCEEEEECCCCcEEEEECCCCcEEEEEe----------------------------cCCceeeeeCC
Confidence 3444444455 678899999999999999987766543321 13566788888
Q ss_pred CCCCEEEEEECCCcEEEEEcCCC------CCCCCeeeec-cCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSH------NVSKPSHTVD-AHTAEVNCLSFNP--YSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~------~~~~~~~~~~-~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
. +++++.|++|++|+.... ...+.+.... +|.++|.+++|+| ++.+ +++|+.||+|++||+++++.
T Consensus 87 ~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 87 A----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp S----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCE
T ss_pred c----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcE
Confidence 3 889999999999977621 1223233333 6778999999999 9985 99999999999999998665
Q ss_pred eeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCC
Q psy4571 185 KLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNE 262 (437)
Q Consensus 185 ~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~ 262 (437)
.... ..|...+.+++|+|++. +|++|+.||.|++||++++.... ..+.+ |...|++++|+|++
T Consensus 162 -~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~-------------~~~~~~h~~~v~~l~fs~~g 226 (343)
T 3lrv_A 162 -YIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQAS-------------SRFPVDEEAKIKEVKFADNG 226 (343)
T ss_dssp -EEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCC-------------EECCCCTTSCEEEEEECTTS
T ss_pred -EEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCc-------------cEEeccCCCCEEEEEEeCCC
Confidence 4444 34566899999999998 69999999999999999875431 23556 99999999999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCc--eeeeecCCCCcccccCC-CCcccccccccccccccccchhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG--ISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
. +|++++ |+.|++||+++++....+.....+.... ..++|+|+|+++++++. ++. +++|++..+
T Consensus 227 ~-~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~-----------i~v~~~~~~ 293 (343)
T 3lrv_A 227 Y-WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS-----------LTIYKFDKK 293 (343)
T ss_dssp S-EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE-----------EEEEEECTT
T ss_pred C-EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc-----------EEEEEEccc
Confidence 9 777888 5599999999987766554311111111 35899999999999877 777 677777554
Q ss_pred h
Q psy4571 340 E 340 (437)
Q Consensus 340 ~ 340 (437)
.
T Consensus 294 ~ 294 (343)
T 3lrv_A 294 T 294 (343)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=248.49 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=206.2
Q ss_pred cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-------CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 98 QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-------NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 98 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
..+.+...|++++|+|+++.+|++++.||.|++||+... .....+..+.+|...|.+++|+|++..+|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 345678899999999965789999999999999999841 1256778888999999999999998856999999
Q ss_pred CCeEEEEeCCCCce------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 171 DKTVALWDLRNLKL------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 171 dg~i~lwd~~~~~~------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
||.|++||+.+... +...+..|...|.+++|+|++..+|++++.||.|++||++..... ..+.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-----------~~~~ 271 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-----------KPSH 271 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-----------SCSE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-----------ccee
Confidence 99999999987332 134567899999999999966668999999999999999976321 2234
Q ss_pred EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCC-cccccCCCCcccc
Q psy4571 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTAS-STASESPTPTNSV 322 (437)
Q Consensus 245 ~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~ 322 (437)
.+..|...|++++|+|++++++++|+.||.|++||+++. .++..+.. +...+..++|+|++. ++++++.|+.
T Consensus 272 ~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~--- 345 (430)
T 2xyi_A 272 TVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRR--- 345 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSC---
T ss_pred EeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCc---
Confidence 567899999999999999888999999999999999984 44555443 556778889999996 5889999988
Q ss_pred cccccccccccccchh--------------hhhhhhhcCCCccccccCCCCCCc-ccccc-------ccccCHHH
Q psy4571 323 HEKNYWQGLVLFDILV--------------CEEQRQLLGTEEESSDRHSSDNDT-EDLNS-------IWSMTDEQ 375 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~--------------~~~~~~~~~h~~~~~~~~~~~~~~-~~~~~-------~w~~~~~~ 375 (437)
|++||+.. .+.+..+.+|...+..+.++|++. .+++. +|++....
T Consensus 346 --------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 346 --------LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp --------CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred --------EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 78888877 245566689999999999999998 44332 88886543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-29 Score=239.43 Aligned_cols=269 Identities=19% Similarity=0.304 Sum_probs=205.8
Q ss_pred cceeEEecCCcc--------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEE
Q psy4571 20 NAFFTWSALPLS--------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 20 ~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+.+++|+...-. .+...|.+++|+ |++++|++|+.|++|++|+..++.......
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v~iWd~~~~~~~~~~~----------------- 186 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT----------------- 186 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCeEEEEEcCCCcEEEEEe-----------------
Confidence 456677655322 223458899998 899999999999999999987766543321
Q ss_pred EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 92 FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
.+...+.+++|+ +.+|++|+.|+.+++||.... ...+..+.+|...+..+.|+|++.. +++++.|
T Consensus 187 ---------~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~-l~s~~~D 251 (420)
T 4gga_A 187 ---------SHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRH-LASGGND 251 (420)
T ss_dssp ---------CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETT
T ss_pred ---------CCCCceEEEeeC---CCEEEEEeCCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCe-eeeeecc
Confidence 123455666665 468999999999999998853 3566788899999999999999995 9999999
Q ss_pred CeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEE--eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 KTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASS--GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 g~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.+++|+..+++. .+.....|...|.+++|+|.+..+++++ +.|+.|++||+.++.. +..+
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--------------~~~~ 317 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--------------LSAV 317 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE--------------EEEE
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc--------------ceee
Confidence 9999999987543 3456778999999999999988877764 4799999999988643 3334
Q ss_pred cCccccEEEEEEccCCCeEEEEE-eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSV-SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
..| ..+.++.|+|+++.+++++ +.|+.|++||+.+++++..+.. |...+..++|+|+|++|++|+.|++
T Consensus 318 ~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g---H~~~V~~l~~spdg~~l~S~s~D~t------ 387 (420)
T 4gga_A 318 DAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADET------ 387 (420)
T ss_dssp ECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTE------
T ss_pred ccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCe------
Confidence 444 5789999999999555433 3799999999999988877754 5667888899999999999999999
Q ss_pred ccccccccccchhhhhhhhhcCCCc
Q psy4571 326 NYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 326 ~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
|++||+......+....+..
T Consensus 388 -----vriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 388 -----LRLWRCFELDPARRREREKA 407 (420)
T ss_dssp -----EEEECCSCSSCC--------
T ss_pred -----EEEEECCCCCccchhhhccC
Confidence 89999877666555554443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=261.04 Aligned_cols=298 Identities=14% Similarity=0.118 Sum_probs=232.1
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~ 99 (437)
.+...|.+++|+ |+++.|++|+.|+.|++|+.. .+.+..+.|++....+ ++..|+.|++|++.....
T Consensus 53 ~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 53 VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (814)
T ss_dssp CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE
T ss_pred cCCCcEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce
Confidence 345679999999 999999999999999999943 4557788888888766 667889999999765421
Q ss_pred -----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEeC--CCCcEEEEEeCC
Q psy4571 100 -----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFNP--YSEYILATGSAD 171 (437)
Q Consensus 100 -----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~~--~~~~~l~sgs~d 171 (437)
..+...|.+++|+|.++..|++++.||.|++||+.. ......+.. +...+.+++|+| ++.. |++|+.|
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~d 207 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ---STPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDD 207 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC---SSCSEEEECCCTTCCCEEEECCSTTCCE-EEEECTT
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcceeEEecCCCCCEEEEEEEECCCCCE-EEEEeCC
Confidence 235678999999996678999999999999999984 344444444 448899999999 8884 9999999
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
|.|++||+++++. +..+.+|...|.+++|+|+++ ++++|+.||.|++||+.++. .+..+..|..
T Consensus 208 g~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~--------------~~~~~~~~~~ 271 (814)
T 3mkq_A 208 LTIKIWDYQTKSC-VATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK--------------VEKTLNVGLE 271 (814)
T ss_dssp SEEEEEETTTTEE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS--------------EEEEECCSSS
T ss_pred CEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--------------EEEEeecCCC
Confidence 9999999998654 778889999999999999998 59999999999999998753 3455778889
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee----------------------------------------
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL---------------------------------------- 291 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------------- 291 (437)
.+.+++|+|++..++++++.|+.+.+|++........+..
T Consensus 272 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (814)
T 3mkq_A 272 RSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKE 351 (814)
T ss_dssp SEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEE
T ss_pred cEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeec
Confidence 9999999999976545666677899999876543222210
Q ss_pred eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
...+...+..++|+|+|+++++++ ++. +.+|++.... ..+...+..+.++|+|..++..
T Consensus 352 ~~~~~~~~~~~~~spdg~~la~~~-~~~-----------~~i~~~~~~~-----~~~~~~i~~~~~spdg~~la~~ 410 (814)
T 3mkq_A 352 LGSVDVFPQSLAHSPNGRFVTVVG-DGE-----------YVIYTALAWR-----NKAFGKCQDFVWGPDSNSYALI 410 (814)
T ss_dssp ECCCSSCCSEEEECTTSSEEEEEE-TTE-----------EEEEETTTTE-----EEEEEECSEEEECTTSSCEEEE
T ss_pred CCCCccCCceeEECCCCCEEEEec-CCE-----------EEEEECcccc-----ccCCCceEEEEEeCCCCeEEEE
Confidence 001122345679999999999988 666 6777754322 2234567788899988876653
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=237.14 Aligned_cols=278 Identities=14% Similarity=0.093 Sum_probs=211.8
Q ss_pred cccccceeEEEEeeCCC---cceEEEeeccCceEeeecCC-CceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCC
Q psy4571 30 LSHSIYRFYRLCVAEPF---DDAVEERVINEEYKIWKKNT-PFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLS 105 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~---~~~l~tgs~d~~v~iw~~~~-~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~ 105 (437)
+.-+.-.|.+++|+ |+ +++|++|+.|+.|++|+..+ +......+ ..+...
T Consensus 35 ~~~h~~~v~~~~~~-~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------------------------~~h~~~ 88 (368)
T 3mmy_A 35 TSSPDDSIGCLSFS-PPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ-------------------------QMHTGP 88 (368)
T ss_dssp SSCCSSCEEEEEEC-CTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE-------------------------EECSSC
T ss_pred ccCCCCceEEEEEc-CCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe-------------------------ccccCC
Confidence 44556778999999 77 58999999999999999765 33221111 124567
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE--eCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--NPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
|.+++|+| ++.+|++|+.||.|++||+.+ .+. ..+..|...|.+++| +|++. +|++++.||.|++||+++++
T Consensus 89 v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~---~~~-~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 89 VLDVCWSD-DGSKVFTASCDKTAKMWDLSS---NQA-IQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTT---TEE-EEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSS
T ss_pred EEEEEECc-CCCEEEEEcCCCcEEEEEcCC---CCc-eeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCc
Confidence 89999999 788999999999999999983 333 346679999999999 88888 49999999999999999866
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. +..+..+ ..+.++.+.++ .+++++.|+.+++|+++....... .....+...+.++.+.++..
T Consensus 163 ~-~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 225 (368)
T 3mmy_A 163 P-MMVLQLP-ERCYCADVIYP---MAVVATAERGLIVYQLENQPSEFR------------RIESPLKHQHRCVAIFKDKQ 225 (368)
T ss_dssp C-SEEEECS-SCEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEE------------ECCCSCSSCEEEEEEEECTT
T ss_pred E-EEEEecC-CCceEEEecCC---eeEEEeCCCcEEEEEeccccchhh------------hccccccCCCceEEEcccCC
Confidence 4 6666655 46777777653 477888899999999987542211 11223334455666655443
Q ss_pred ---eEEEEEeCCCeEEEEeCCCCCC---ceeeeeeec---------ccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 264 ---WVICSVSEDNIMQEYCDSTDSD---TKTMRLDSI---------RSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 264 ---~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~---------~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
..+++++.||.|++||++.... ...+..... +...+..++|+|+++++++++.|+.
T Consensus 226 ~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~--------- 296 (368)
T 3mmy_A 226 NKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR--------- 296 (368)
T ss_dssp SCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC---------
T ss_pred CCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe---------
Confidence 2388999999999999998743 333332211 0014777899999999999999998
Q ss_pred cccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 329 QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
|++||+.+++.+..+.+|...+..+.++|+|..++..
T Consensus 297 --i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 297 --FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp --EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred --EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 8999999999999999999999999999999887765
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=260.39 Aligned_cols=255 Identities=14% Similarity=0.207 Sum_probs=199.8
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |+++++++|+.|++|++|+..++...... ....+...|.+++
T Consensus 6 ~gH~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~------------------------~l~~h~~~V~~l~ 60 (753)
T 3jro_A 6 NAHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLID------------------------TLTGHEGPVWRVD 60 (753)
T ss_dssp --CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEE------------------------EECCCSSCEEEEE
T ss_pred ccCcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccce------------------------eccCCcCceEEEE
Confidence 4456679999999 99999999999999999997633211110 0112457899999
Q ss_pred eeCCC-CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCc-eee
Q psy4571 111 WHLLH-ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLK-LKL 186 (437)
Q Consensus 111 ~sp~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~-~~~ 186 (437)
|+|+. +.+|++|+.||.|++||+.++. ......+.+|...|.+++|+|+ +. ++++|+.||.|++||+++.. ...
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCC
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCc-ccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcce
Confidence 99832 7899999999999999998431 2266777899999999999999 77 59999999999999999863 224
Q ss_pred eEeccCCCceEEEEEcCC-------------CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 187 HSFESHKDEIFQVQWSPH-------------NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~-------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
..+.+|...|.+++|+|. +. .+++|+.||.|++||++..... ......+.+|...|
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~----------~~~~~~~~~h~~~V 207 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWV 207 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCE
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCccc----------ceeeeeecCCCCcE
Confidence 566789999999999994 66 5899999999999999875422 13456678999999
Q ss_pred EEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCcee--eeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 254 SDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKT--MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 254 ~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
++++|+|+ +. ++++++.||.|++||++++..... ......+...+..++|+|+|.++++++.|+.+.+|+
T Consensus 208 ~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 208 RDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp EEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred EEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 99999999 66 899999999999999998743221 112222455667789999999999999999944443
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=232.45 Aligned_cols=271 Identities=11% Similarity=0.086 Sum_probs=196.1
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc---------eeEEEecCCCCeE--EEecCceEEEEEeeecc-
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------LYDLVVNNYVANI--SCILNISILFFEIIFTQ- 98 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~- 98 (437)
..+...|.+++|+ |+++++++|+.|+ +++|+.+... +..+.+.+....+ +...++.|++||...++
T Consensus 16 ~~h~~~V~~v~fs-~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFN-QDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEEC-TTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEEC-CCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 4567789999999 9999999998775 7899965432 2233344444544 34566799999976543
Q ss_pred --ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEE--EeCCCeE
Q psy4571 99 --NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT--GSADKTV 174 (437)
Q Consensus 99 --~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s--gs~dg~i 174 (437)
.+.++..|.+++|+++ .++++ .|+.|++||+.+. .+.+..+.. +...+++++ .. ++. |+.||.|
T Consensus 94 ~~~~~~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~--~~~~~~~~~---~~~~~~~s~--~~-la~~sg~~~g~v 161 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNP--WKRITDDIR---FGGVCEFSN--GL-LVYSNEFNLGQI 161 (355)
T ss_dssp EEEEECSSCEEEEEECSS---EEEEE-ETTEEEEEESSTT--CCBSSCCEE---EEEEEEEET--TE-EEEEESSCTTCE
T ss_pred EEEEECCCceEEEEEcCC---EEEEE-EcCEEEEEECCCC--ceeeEEecc---CCceEEEEc--cE-EEEeCCCcCcEE
Confidence 3456779999999882 34444 3789999999853 133444433 455566777 43 554 6899999
Q ss_pred EEEeCCCCc--------------ee-eeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCC
Q psy4571 175 ALWDLRNLK--------------LK-LHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 175 ~lwd~~~~~--------------~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~ 238 (437)
++||+++++ .+ +..+.+|.++|++++|+|+++ +|++|+.|++ |++||+++++.
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~---------- 230 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVL---------- 230 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCE----------
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcE----------
Confidence 999999754 12 667889999999999999998 5999999998 99999998643
Q ss_pred CCceEEEec-C-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee--------------------eeeccc
Q psy4571 239 PPELLFIHG-G-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR--------------------LDSIRS 296 (437)
Q Consensus 239 ~~~~~~~~~-~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~~~ 296 (437)
+..+. + |...|.+++|+|+++ +|++++.|++|++||++.+...+... ......
T Consensus 231 ----~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 3vu4_A 231 ----VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKH 305 (355)
T ss_dssp ----EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTT
T ss_pred ----EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCC
Confidence 44465 5 999999999999999 78899999999999998764322111 100011
Q ss_pred CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 297 NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.....++|+++|+.+++++.|+. +++|++..++..
T Consensus 306 ~~~~~~a~~~d~~~l~~~~~dg~-----------~~~~~~~~~~~~ 340 (355)
T 3vu4_A 306 VRGCKIAWISESSLVVVWPHTRM-----------IETFKVVFDDEM 340 (355)
T ss_dssp CCCCEEEESSSSEEEEEETTTTE-----------EEEEEEEEETTT
T ss_pred CCceEEEEeCCCCEEEEEeCCCe-----------EEEEEEEcCCCC
Confidence 11255789999999999999998 788887766543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=239.67 Aligned_cols=244 Identities=19% Similarity=0.227 Sum_probs=200.9
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|.+++|+| ++.+|++|+.||.|++||+... ..+.+..+.+|...|.+++|+|+ +. +|++|+.||.|++||
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 9 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWK 85 (379)
T ss_dssp ECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEE
T ss_pred CCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEE
Confidence 3667899999999 6889999999999999999743 24566788899999999999977 77 599999999999999
Q ss_pred CCCCce-eeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLKL-KLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~~-~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++. ....+..|...|.+++|+|+ +. ++++++.|+.|++||++...... ...+.+|...|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~------------~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 152 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC------------EEEEECCTTCEEE
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee------------eEEecCCCCceEE
Confidence 998652 36677889999999999999 77 69999999999999998764322 2456789999999
Q ss_pred EEEcc-------------CCCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCceeeeecCC---CCcccccCCCC
Q psy4571 256 FSWNP-------------NEPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGGISSTASPT---ASSTASESPTP 318 (437)
Q Consensus 256 l~~~p-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~s~~---g~~l~s~s~d~ 318 (437)
++|+| ++. ++++++.||.|++||++++....... ....+...+..++|+|+ +.++++++.|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 99999 577 88999999999999999876543332 22234566778899999 89999999999
Q ss_pred cccccccccccccccccchhhh-----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 319 TNSVHEKNYWQGLVLFDILVCE-----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
. +++||+.+++ ......+|...+..+.++|+|..++.. +|++.
T Consensus 232 ~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 232 T-----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp C-----------EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred E-----------EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 8 8999998864 233345688899999999999887754 78875
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=235.43 Aligned_cols=267 Identities=16% Similarity=0.149 Sum_probs=201.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lw 177 (437)
.|...|++++|+| ++.+|++|+.||.|++||+.+.... +....+.+|...|.+++|+| ++. +|++|+.||.|++|
T Consensus 9 gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 9 GHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTVKLW 86 (351)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCEEEE
T ss_pred ccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEE
Confidence 3677899999999 7889999999999999999853211 35667789999999999999 577 59999999999999
Q ss_pred eCCCCc--------eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 178 DLRNLK--------LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 178 d~~~~~--------~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
|++++. .+...+..|...|.+++|+|+ +. ++++++.||.|++||+++.............. .......
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~ 164 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMK-VLSIPPA 164 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEE-SCSCCCS
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccc-ccccccC
Confidence 998753 346678889999999999999 87 59999999999999999876554421100000 0001123
Q ss_pred CccccEEEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC----CcccccCCCCcc
Q psy4571 248 GHTAKISDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA----SSTASESPTPTN 320 (437)
Q Consensus 248 ~h~~~v~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~s~s~d~~~ 320 (437)
+|...+.+++|+|+ +. ++++++.|+.+.+|+...++... ......+...+..++|+|++ .++++++.|+.+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHV-AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEE-EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceee-eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 67889999999997 66 88899999999888887765422 22222355677888999998 899999999995
Q ss_pred cccccccc-----------------------------------cccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 321 SVHEKNYW-----------------------------------QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 321 ~~~~~~~~-----------------------------------~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
++|+.... ..+.+|+...++.+..+.+|...+..+.++|++..++
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 44433221 0122333333467777899999999999999998777
Q ss_pred cc-------ccccCH
Q psy4571 366 NS-------IWSMTD 373 (437)
Q Consensus 366 ~~-------~w~~~~ 373 (437)
+. +|++..
T Consensus 323 s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 323 SAGDDGKVRLWKATY 337 (351)
T ss_dssp EEETTSCEEEEEECT
T ss_pred EecCCCcEEEEecCc
Confidence 64 888854
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-28 Score=234.11 Aligned_cols=273 Identities=12% Similarity=0.095 Sum_probs=200.2
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCc----------------------------------------------
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------------------------------------------- 68 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------------------------------------------- 68 (437)
..+.+++|+ +++++++++ .++.|++|+..++.
T Consensus 5 ~p~~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 356778899 999866655 57889999965443
Q ss_pred ----------------------eeEEEecCCCCeE--EEecCceEEEEEee--ecccc------ccCCCcceEEeeCCCC
Q psy4571 69 ----------------------LYDLVVNNYVANI--SCILNISILFFEII--FTQNF------PFPLSRQDVAWHLLHE 116 (437)
Q Consensus 69 ----------------------~~~~~~~~~~~~i--~~~~~~~i~~~~~~--~~~~~------~~~~~v~~~~~sp~~~ 116 (437)
+..+.|++....+ ++..|+.|++||+. .+... .++..|.+++|+| ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CC
Confidence 6778888888875 45578999999987 43322 3467899999999 68
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCC-CeeeeccCCCCeEEEEEeCC---CCcEEEEEeCCCeEEEEeCCCCceeeeE-ecc
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPY---SEYILATGSADKTVALWDLRNLKLKLHS-FES 191 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~---~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~ 191 (437)
.+|++|+.+|.|++|++.+..... ....+.+|...|.+++|+|+ +. +|++|+.|+.|++||+++++. +.. +.+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~-~~~~~~~ 239 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI-VDKWLFG 239 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC-EEEECCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce-eeeeecC
Confidence 899999999999999998554333 44477789999999999999 77 599999999999999998765 444 668
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC----------CCCCce-EEEecCccccEEEEEEcc
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE----------DGPPEL-LFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~----------~~~~~~-~~~~~~h~~~v~~l~~~p 260 (437)
|...|.+++|+ +++ +|++|+.|+.|++||+++++......... ..+... ..........|.+++|+|
T Consensus 240 h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 99999999999 887 59999999999999999876433321000 000000 000012345799999999
Q ss_pred CCCeEEEEEe-CCCeEEEEeC--CCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 261 NEPWVICSVS-EDNIMQEYCD--STDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 261 ~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+++ ++++++ .|+.|++|++ .++..+........+ ..+..++|+|++.+++.++.
T Consensus 318 ~~~-~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 318 NLP-FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp SSS-EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred CCC-EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 999 566666 8999999999 555333333222222 56778899997666665554
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-29 Score=241.17 Aligned_cols=271 Identities=17% Similarity=0.190 Sum_probs=211.4
Q ss_pred eeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC
Q psy4571 61 IWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS 135 (437)
Q Consensus 61 iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~ 135 (437)
....|.+.+ ..+.+. ....++++.|+.|++||+...+.. .+...|.+++|+|+ + +|++|+.||+|++||++
T Consensus 116 ~l~~h~~~v~~~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i~vwd~~- 191 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-G-ILVSGSTDRTVRVWDIK- 191 (464)
T ss_dssp EEECCSSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST-T-EEEEEETTSCEEEEETT-
T ss_pred EEcCCCCCcEEEEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC-C-EEEEEeCCCCEEEEECC-
Confidence 344455443 333332 233447789999999997655432 36789999999983 4 99999999999999998
Q ss_pred CCCCCCeeeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEeCCCCcee----------------------eeEecc
Q psy4571 136 HNVSKPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALWDLRNLKLK----------------------LHSFES 191 (437)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd~~~~~~~----------------------~~~~~~ 191 (437)
..+.+..+.+|.+.|.+++|++ ++. .+++|+.||+|++||+++.... ...+.+
T Consensus 192 --~~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 192 --KGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp --TTEEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred --CCcEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 5567888899999999999994 566 5999999999999999875431 445678
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...|.++ +++++ .+++|+.|+.|++||+++. +.+..+.+|...|.+++|+|+++ .+++|+.
T Consensus 269 ~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~ 330 (464)
T 3v7d_B 269 HMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM--------------KCLYILSGHTDRIYSTIYDHERK-RCISASM 330 (464)
T ss_dssp CSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEEETTTT-EEEEEET
T ss_pred ccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC--------------cEEEEecCCCCCEEEEEEcCCCC-EEEEEeC
Confidence 88888887 46676 5999999999999999875 44566889999999999999999 7889999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE 351 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~ 351 (437)
||.|++||+++++++..+.. +...+..+.++ +.++++++.|+. +++||+.+++..... .|...
T Consensus 331 dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~-----------v~vwd~~~~~~~~~~-~~~~~ 393 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQG---HTALVGLLRLS--DKFLVSAAADGS-----------IRGWDANDYSRKFSY-HHTNL 393 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC---CSSCEEEEEEC--SSEEEEEETTSE-----------EEEEETTTCCEEEEE-ECTTC
T ss_pred CCcEEEEECCCCcEEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCc-----------EEEEECCCCceeeee-cCCCC
Confidence 99999999999887766653 44555555665 689999999998 899999887655444 34556
Q ss_pred ccccCCCCCCcccccc------ccccCH
Q psy4571 352 SSDRHSSDNDTEDLNS------IWSMTD 373 (437)
Q Consensus 352 ~~~~~~~~~~~~~~~~------~w~~~~ 373 (437)
+....+++++..++.+ +|++..
T Consensus 394 ~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp CCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred ccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 6677788888766654 888744
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-29 Score=241.32 Aligned_cols=263 Identities=12% Similarity=0.093 Sum_probs=206.8
Q ss_pred eeEEEecCCCCeEEEecCceEEEEEeeecc---cc---------------------------------------------
Q psy4571 69 LYDLVVNNYVANISCILNISILFFEIIFTQ---NF--------------------------------------------- 100 (437)
Q Consensus 69 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---~~--------------------------------------------- 100 (437)
+..+.+++.+..+.+..++.|.+||+..++ .+
T Consensus 7 ~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKR 86 (450)
T ss_dssp CCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccc
Confidence 445667888888888888999999976555 11
Q ss_pred -------------ccCCCcceEEeeCCCCCE-EEEEECCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcE
Q psy4571 101 -------------PFPLSRQDVAWHLLHESL-FGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 101 -------------~~~~~v~~~~~sp~~~~~-l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~ 164 (437)
.+...|.+++|+| ++.+ +++|+.||.|++||+... ....+..+. .|...|.+++|+|++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~- 163 (450)
T 2vdu_B 87 TAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKT-SKNVLKLRKRFCFSKRPNAISIAEDDTT- 163 (450)
T ss_dssp -------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSS-SSSCEEEEEEEECSSCEEEEEECTTSSE-
T ss_pred cCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCC-CCceeeeeecccCCCCceEEEEcCCCCE-
Confidence 0112589999999 5666 489999999999999721 124455554 67789999999999995
Q ss_pred EEEEeCCCeEEEEeCCCCce---eeeEeccCCCceEEEEEcCC---CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 165 LATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPH---NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|++|+.||.|++|++.+... +...+.+|...|++++|+|+ ++ +|++|+.|+.|++||++++..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~---------- 232 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI---------- 232 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC----------
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce----------
Confidence 99999999999999987553 22367789999999999999 76 689999999999999987543
Q ss_pred CCceEEE-ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee----------------------cc
Q psy4571 239 PPELLFI-HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS----------------------IR 295 (437)
Q Consensus 239 ~~~~~~~-~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------------~~ 295 (437)
+.. ..+|...|.+++|+ +++ +|++++.|+.|++||+++++++..+.... ..
T Consensus 233 ----~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 233 ----VDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp ----EEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred ----eeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 222 56899999999999 888 88899999999999999998877775321 11
Q ss_pred cCCceeeeecCCCCcccccC-CCCcccccccccccccccccc--hhh---hhhhhhcCCCccccccCCCCCCcc
Q psy4571 296 SNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDI--LVC---EEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 296 ~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~--~~~---~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
...+..++++|++.++++++ .++. |++||+ .++ +.+..+.+| ..+..+.++|++..
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~-----------i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKC-----------IIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQ 368 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSE-----------EEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCe-----------EEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEE
Confidence 23455679999999999988 7777 899998 666 666777888 67888888885443
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=233.01 Aligned_cols=274 Identities=9% Similarity=-0.001 Sum_probs=201.1
Q ss_pred CceeEEEecCCCCeEEEecC--------ceEEEEEeeecccc--------------ccCCCcceEEeeCCCCCEEEEE--
Q psy4571 67 PFLYDLVVNNYVANISCILN--------ISILFFEIIFTQNF--------------PFPLSRQDVAWHLLHESLFGSV-- 122 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~~~--------~~i~~~~~~~~~~~--------------~~~~~v~~~~~sp~~~~~l~~~-- 122 (437)
-.++.+.|++++..+++++. ..|++|++...... .+...+.++++++ ..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEEC
Confidence 35899999998888766532 25999997533211 1344677777764 456555
Q ss_pred ---------ECCCcEEEEEcCCCCCC-CCeee-----eccCCCCeEEEEEeCCCCcEEE--EEeCCCeEEEEeCCCCcee
Q psy4571 123 ---------ADDQKLMIWDTRSHNVS-KPSHT-----VDAHTAEVNCLSFNPYSEYILA--TGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 123 ---------~~dg~v~vwd~~~~~~~-~~~~~-----~~~h~~~v~~l~~~~~~~~~l~--sgs~dg~i~lwd~~~~~~~ 185 (437)
+.|+.+++|++...... +.... ...+...+.+++|+|||++ ++ +++.|++|+|||+++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~-la~as~~~d~~i~iwd~~~~~~- 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV-AAIASSKVPAIMRIIDPSDLTE- 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC-EEEEESCSSCEEEEEETTTTEE-
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE-EEEEECCCCCEEEEeECCCCcE-
Confidence 35778999998743211 11111 1234556899999999996 54 455799999999999665
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
+..+. |...|.+++|+|+|+ ++++++. +.+++|+..++.... .....+|...|.+++|+|+++ .
T Consensus 170 ~~~~~-~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~~~~~~~~~------------~~~~~~~~~~v~~v~fspdg~-~ 233 (365)
T 4h5i_A 170 KFEIE-TRGEVKDLHFSTDGK-VVAYITG-SSLEVISTVTGSCIA------------RKTDFDKNWSLSKINFIADDT-V 233 (365)
T ss_dssp EEEEE-CSSCCCEEEECTTSS-EEEEECS-SCEEEEETTTCCEEE------------EECCCCTTEEEEEEEEEETTE-E
T ss_pred EEEeC-CCCceEEEEEccCCc-eEEeccc-eeEEEEEeccCccee------------eeecCCCCCCEEEEEEcCCCC-E
Confidence 55554 788999999999998 5888875 456677766654321 133567888999999999999 7
Q ss_pred EEEEeCCC----eEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 266 ICSVSEDN----IMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 266 l~s~~~dg----~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+++++.|+ .++.|++........ ......+...+.+++|+|||++||+|+.|++ |++||+.+++
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~-----------V~iwd~~~~~ 302 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS-----------IALVKLKDLS 302 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-----------EEEEETTTTE
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-----------EEEEECCCCc
Confidence 77888776 688999877643221 1122234556778899999999999999999 8999999999
Q ss_pred hhhh-hcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 341 EQRQ-LLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 341 ~~~~-~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
.+.. +.+|...|.++.|+|||..+++. ||++.
T Consensus 303 ~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 303 MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9887 58999999999999999998875 89884
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-27 Score=231.13 Aligned_cols=265 Identities=18% Similarity=0.244 Sum_probs=211.0
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCC-----------ceeEEEecCCCCeEEEecCceEEEEEeeecccc-
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP-----------FLYDLVVNNYVANISCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~-----------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~- 100 (437)
+...|.+++|+ ++.+++|+.|++|++|+..++ .+..+.+.+ ...++++.|+.|++||+...+..
T Consensus 158 h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 158 HTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRVVSGSRDATLRVWDIETGQCLH 233 (445)
T ss_dssp CSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEESSSCCEEE
T ss_pred CCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC-CEEEEEeCCCEEEEEECCCCcEEE
Confidence 45678889987 569999999999999996544 344444432 23457788999999998755432
Q ss_pred ---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 101 ---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
.+...+.+++| ++.++++|+.||.|++||+. ..+.+..+.+|...|.+++| ++. .+++|+.||.|++|
T Consensus 234 ~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 234 VLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVW 304 (445)
T ss_dssp EEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEE
T ss_pred EEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEE
Confidence 35678999999 46789999999999999998 56778888899999999999 567 49999999999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC---ccccEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKIS 254 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~ 254 (437)
|+++++. +..+.+|...+.++.++ ++ .+++|+.||.|++||+++++. +..+.+ |...|.
T Consensus 305 d~~~~~~-~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~~~--------------~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 305 DVETGNC-IHTLTGHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKTGQC--------------LQTLQGPNKHQSAVT 366 (445)
T ss_dssp ETTTCCE-EEEECCCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCCE--------------EEEECSTTSCSSCEE
T ss_pred ECCCCCE-EEEEcCCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCCCcE--------------EEEEccCCCCCCCEE
Confidence 9999665 78888999999998885 44 589999999999999987643 333444 888999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
+++|+ ++ ++++|+.||.|++||+++++.+..+... ..+...+..++|+|++.++++|+.|++... .+.
T Consensus 367 ~~~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~-------~l~ 436 (445)
T 2ovr_B 367 CLQFN--KN-FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET-------KLL 436 (445)
T ss_dssp EEEEC--SS-EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC-------EEE
T ss_pred EEEEC--CC-EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCcc-------EEE
Confidence 99996 44 7999999999999999999887776422 234455677799999999999999986211 167
Q ss_pred cccchh
Q psy4571 333 LFDILV 338 (437)
Q Consensus 333 ~wd~~~ 338 (437)
+||+..
T Consensus 437 v~df~~ 442 (445)
T 2ovr_B 437 VLDFDV 442 (445)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 777653
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=237.44 Aligned_cols=247 Identities=11% Similarity=0.036 Sum_probs=166.5
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC-------CCCC
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL-------LHES 117 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp-------~~~~ 117 (437)
+.+.++++|+.|++||+|+..++........ .....|...|++++|+| .++.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~---------------------~~~~gH~~~v~~v~~~p~~~~~~~~d~~ 157 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVL---------------------GGKSGHHNFVNDIDIADVYSADNRLAEQ 157 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEE---------------------CTTTSCSSCEEEEEEEEEECTTCSEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeee---------------------cccCCCCCceEEEEEccccccccCCCCC
Confidence 4555667777777777777655443221110 01123567899999987 2568
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-----------
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL----------- 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~----------- 186 (437)
+||+|+.|++|+|||+. ...+...+..|..+|.+++|+|++..+|++|+.||+|++||+++++...
T Consensus 158 ~las~s~D~tv~~Wd~~---~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLT---DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEETTSEEEEEEEE---TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred EEEEEECCCeEEEEECC---CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 99999999999999998 4456667778999999999999987679999999999999998754311
Q ss_pred -------------eEeccCCCceEEEEEc-CCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC-----CCceEEEec
Q psy4571 187 -------------HSFESHKDEIFQVQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-----PPELLFIHG 247 (437)
Q Consensus 187 -------------~~~~~h~~~v~~v~~~-p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~ 247 (437)
....+|...+.++.|+ |+++ .+++++.|+++++||+............... .........
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 1123577888999987 7887 5899999999999999876544332211000 001111222
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.+...+..+.+.+.+..++++|+.||.|++||+.++++...... +...+..++|+|||++||+++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 22222333333334455677888999999999999987766543 4567788899999999999998885
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=220.16 Aligned_cols=243 Identities=16% Similarity=0.123 Sum_probs=191.7
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...|.+++|+ |+++.+++|+.|+.+++|+........ .+ .....+...+.+++|+
T Consensus 59 ~~~v~~~~~~-~~~~~l~~~~~dg~i~~~~~~~~~~~~--------~~---------------~~~~~~~~~i~~~~~~- 113 (313)
T 3odt_A 59 QGFLNSVCYD-SEKELLLFGGKDTMINGVPLFATSGED--------PL---------------YTLIGHQGNVCSLSFQ- 113 (313)
T ss_dssp SSCEEEEEEE-TTTTEEEEEETTSCEEEEETTCCTTSC--------C----------------CEECCCSSCEEEEEEE-
T ss_pred CccEEEEEEC-CCCCEEEEecCCCeEEEEEeeecCCCC--------cc---------------cchhhcccCEEEEEec-
Confidence 5567888888 888888888888888888864421100 00 0011245678889884
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeEecc-
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHSFES- 191 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~- 191 (437)
+.++++++.||.|++||. ......+..|...+.+++|+| ++. .+++++.||.|++||.. + ....+..
T Consensus 114 --~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~-~~~~~~~~ 182 (313)
T 3odt_A 114 --DGVVISGSWDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVSFSEN-KFLTASADKTIKLWQND--K-VIKTFSGI 182 (313)
T ss_dssp --TTEEEEEETTSEEEEEET-----TEEEEEEECCSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT--E-EEEEECSS
T ss_pred --CCEEEEEeCCCCEEEEcC-----CcEEEecccCCCceeEEEEccCCCC-EEEEEECCCCEEEEecC--c-eEEEEecc
Confidence 568999999999999992 356777889999999999998 666 59999999999999943 3 3556665
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...+.+++|+|++. +++++.||.|++||+++++ .+..+.+|...|++++|+|++. +++++.
T Consensus 183 ~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~--l~~~~~ 244 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD--------------VLRTYEGHESFVYCIKLLPNGD--IVSCGE 244 (313)
T ss_dssp CSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECTTSC--EEEEET
T ss_pred CcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh--------------hhhhhhcCCceEEEEEEecCCC--EEEEec
Confidence 899999999999986 7899999999999998753 4556788999999999999995 679999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
||.|++||+++++....+.. +...+..++|+|+++ +++++.|+. +++||+.+++.....
T Consensus 245 dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~-~~~~~~dg~-----------i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 245 DRTVRIWSKENGSLKQVITL---PAISIWSVDCMSNGD-IIVGSSDNL-----------VRIFSQEKSRWASED 303 (313)
T ss_dssp TSEEEEECTTTCCEEEEEEC---SSSCEEEEEECTTSC-EEEEETTSC-----------EEEEESCGGGCCC--
T ss_pred CCEEEEEECCCCceeEEEec---cCceEEEEEEccCCC-EEEEeCCCc-----------EEEEeCCCCceeehh
Confidence 99999999999987777654 445677889999999 556788888 899999888765443
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=231.05 Aligned_cols=260 Identities=17% Similarity=0.237 Sum_probs=205.9
Q ss_pred CceeEEEecCCCCe-EEEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 67 PFLYDLVVNNYVAN-ISCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 67 ~~~~~~~~~~~~~~-i~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
..+..+.+ +... +++..|+.|++||....+.. .+...|.+++| ++.+|++|+.||.|++||+. ..+.
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~---~~~~ 205 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN---TGEM 205 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESS---SCCE
T ss_pred CcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECC---CCcE
Confidence 44665554 3343 47788999999997654432 36678999998 46799999999999999998 5677
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
+..+.+|...|.+++|++ . .+++|+.||.|++||++++... ...+.+|...|.+++| +++ .+++|+.||.|+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~ 279 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIK 279 (435)
T ss_dssp EEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEE
T ss_pred EEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEE
Confidence 888899999999999974 3 5999999999999999986542 2567889999999999 555 589999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCc
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG 299 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (437)
+||++++. .+..+.+|...|.+++|+ +. ++++|+.||.|++||+++++++..+.. +...+
T Consensus 280 vwd~~~~~--------------~~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v 339 (435)
T 1p22_A 280 VWNTSTCE--------------FVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEG---HEELV 339 (435)
T ss_dssp EEETTTCC--------------EEEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCCEEEEECC---CSSCE
T ss_pred EEECCcCc--------------EEEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCCEEEEEeC---CcCcE
Confidence 99998763 455678999999999994 45 789999999999999999987776653 34445
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhh---------hhhhhcCCCccccccCCCCCCcccccc---
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE---------EQRQLLGTEEESSDRHSSDNDTEDLNS--- 367 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~---------~~~~~~~h~~~~~~~~~~~~~~~~~~~--- 367 (437)
..+++ ++.++++|+.|+. |++||+.+++ .+..+.+|...+.++.+ ++..+++.
T Consensus 340 ~~~~~--~~~~l~sg~~dg~-----------i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 340 RCIRF--DNKRIVSGAYDGK-----------IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp EEEEC--CSSEEEEEETTSC-----------EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS
T ss_pred EEEEe--cCCEEEEEeCCCc-----------EEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC
Confidence 55555 8999999999998 8999999887 67788999999998887 44444443
Q ss_pred ----ccccCHHH
Q psy4571 368 ----IWSMTDEQ 375 (437)
Q Consensus 368 ----~w~~~~~~ 375 (437)
+|++....
T Consensus 405 g~i~iwd~~~~~ 416 (435)
T 1p22_A 405 DTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEC-----
T ss_pred CEEEEEECCCCC
Confidence 89985543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=216.62 Aligned_cols=284 Identities=11% Similarity=0.057 Sum_probs=177.0
Q ss_pred hhhhhhhcccceeEEecCC--cccccceeEEEEeeCCCcc-eEEEeeccCceEeeecCCC--------------ceeEEE
Q psy4571 11 PKLLLHLSQNAFFTWSALP--LSHSIYRFYRLCVAEPFDD-AVEERVINEEYKIWKKNTP--------------FLYDLV 73 (437)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~~~--------------~~~~~~ 73 (437)
.+..+.+++--+.+.+..+ ..-....+.++-+..+..+ .-+.......|++|+.+.+ .+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T 2w18_A 14 LPASDSINPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIV 93 (356)
T ss_dssp ----------CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEEC
T ss_pred CccccCcCcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEE
Confidence 3445555653343433332 2233455666666644432 2333344778999997665 355555
Q ss_pred ecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC---------------------CCCEEEEEE--CCCcEEE
Q psy4571 74 VNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL---------------------HESLFGSVA--DDQKLMI 130 (437)
Q Consensus 74 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~---------------------~~~~l~~~~--~dg~v~v 130 (437)
+.++...+.|..-|.+.+ ..|+.++|+|+ +++++.+++ .|+.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~------------~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~ 161 (356)
T 2w18_A 94 PVPDVYNLVCVALGNLEI------------REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEV 161 (356)
T ss_dssp CCTTCCSCEEEEECSSSE------------EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEE
T ss_pred EcCcccceeeeeeccccc------------cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEE
Confidence 555555555544332211 12334444441 233333322 4999999
Q ss_pred EEcCCCCCCCCeeeeccCCCCeEEEEEeC---CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC---CceEEEEEcCC
Q psy4571 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNP---YSEYILATGSADKTVALWDLRNLKLKLHSFESHK---DEIFQVQWSPH 204 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~~p~ 204 (437)
|++.. .++.+..+.+|...+..++|+| ++. +|++|+.|++|+|||+++++. +.++.+|. ..+.+++|+|+
T Consensus 162 ~~~s~--dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 162 MTFAE--DGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp EEECT--TSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEEEEEET
T ss_pred EEECC--CCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEEEECCC
Confidence 99963 3566777788999999999998 667 599999999999999999775 77777643 46788899999
Q ss_pred CCcE-----------EEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 205 NETI-----------LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 205 ~~~~-----------l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
|..+ +++|+.|++|++||..++...... .+....+|...+.+..++ +. ++++++.|+
T Consensus 238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~---------~~~~p~Gh~~~~lsg~~s--g~-~lASgS~Dg 305 (356)
T 2w18_A 238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM---------LYCLPPGQAGRFLEGDVK--DH-CAAAILTSG 305 (356)
T ss_dssp TEEEEEEC------------CCEEEEEEETTTTEEEEEE---------EECCCTTCCCCEEEEEEE--TT-EEEEEETTS
T ss_pred CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE---------EeeccCCCcceeEccccC--CC-EEEEEcCCC
Confidence 9753 367889999999999876432210 000024666655544444 66 899999999
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+|++||+.+++++.++.. +...+.. ++|||||++|++|+.|++ |++||+
T Consensus 306 TIkIWDl~tGk~l~tL~g---H~~~vvs~vafSPDG~~LaSGS~D~T-----------IklWd~ 355 (356)
T 2w18_A 306 TIAIWDLLLGQCTALLPP---VSDQHWSFVKWSGTDSHLLAGQKDGN-----------IFVYHY 355 (356)
T ss_dssp CEEEEETTTCSEEEEECC---C--CCCCEEEECSSSSEEEEECTTSC-----------EEEEEE
T ss_pred cEEEEECCCCcEEEEecC---CCCCeEEEEEECCCCCEEEEEECCCc-----------EEEecC
Confidence 999999999998888753 3344454 699999999999999999 788875
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-27 Score=216.88 Aligned_cols=258 Identities=17% Similarity=0.271 Sum_probs=200.2
Q ss_pred cceeEEecCCcc--------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEE
Q psy4571 20 NAFFTWSALPLS--------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 20 ~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+.+++|+...-. .+...|.+++|+ |+++.+++|+.|++|++|+..++....... .
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-~--------------- 107 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-S--------------- 107 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-C---------------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCcEEEeecCCceeEEEec-C---------------
Confidence 456677654322 234458999999 999999999999999999988876654422 1
Q ss_pred EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 92 FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
+...+.+ +++ ++.++++|+.++.+++|+.... ...+..+.+|...+.++.+++++.. |++++.|
T Consensus 108 ----------h~~~~~~--~~~-~~~~l~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d 171 (318)
T 4ggc_A 108 ----------HSARVGS--LSW-NSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRH-LASGGND 171 (318)
T ss_dssp ----------CSSCEEE--EEE-ETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETT
T ss_pred ----------ccceEEE--eec-CCCEEEEEecCCceEeeecCCC--ceeEEEEcCccCceEEEEEcCCCCE-EEEEecC
Confidence 1122333 333 4578999999999999998753 3566778899999999999999995 9999999
Q ss_pred CeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEE--EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 KTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETIL--ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 g~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l--~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
|.|++||+++++. .......|.+.|.+++++|++..++ ++++.++.|++||.+.... ...
T Consensus 172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---------------~~~ 236 (318)
T 4ggc_A 172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---------------LSA 236 (318)
T ss_dssp SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---------------EEE
T ss_pred cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---------------ccc
Confidence 9999999987543 2345567888999999999887755 3567789999999987542 223
Q ss_pred cCccccEEEEEEccCCCeEEEE-EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICS-VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
..+...+..+.|+|+++.++++ |+.|+.|++||+++++++..+.. |...+..++|+|+|++|++|+.|++
T Consensus 237 ~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g---H~~~V~~l~~spdg~~l~S~s~D~~------ 307 (318)
T 4ggc_A 237 VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADET------ 307 (318)
T ss_dssp EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTE------
T ss_pred ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCe------
Confidence 4566789999999999955433 34799999999999988877754 5667788899999999999999999
Q ss_pred ccccccccccchhh
Q psy4571 326 NYWQGLVLFDILVC 339 (437)
Q Consensus 326 ~~~~~i~~wd~~~~ 339 (437)
|++||+...
T Consensus 308 -----v~iWd~~~~ 316 (318)
T 4ggc_A 308 -----LRLWRCFEL 316 (318)
T ss_dssp -----EEEECCSCC
T ss_pred -----EEEEECCCC
Confidence 788887543
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=252.71 Aligned_cols=244 Identities=19% Similarity=0.225 Sum_probs=201.3
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+| ++.+|++|+.||.|++||+... .......+.+|.++|.+++|+|+ +. .|++|+.||.|++||
T Consensus 7 gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 7 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWK 83 (753)
T ss_dssp -CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEEEE
T ss_pred cCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEEEE
Confidence 3567899999999 6789999999999999999743 34567788899999999999988 77 599999999999999
Q ss_pred CCCCce-eeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLKL-KLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~~-~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++. ....+..|...|++++|+|+ ++ .+++|+.||.|++||++...... .....+|...|.+
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~------------~~~~~~~~~~v~~ 150 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 150 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC------------CEEEECCSSCEEE
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc------------eeEeecCCCceEE
Confidence 998652 36677889999999999999 77 69999999999999998864322 2446789999999
Q ss_pred EEEccC-------------CCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCceeeeecCC---CCcccccCCCC
Q psy4571 256 FSWNPN-------------EPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGGISSTASPT---ASSTASESPTP 318 (437)
Q Consensus 256 l~~~p~-------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~s~~---g~~l~s~s~d~ 318 (437)
++|+|. +. ++++|+.||.|++||++++....... ....+...+..++|+|+ +.++++++.|+
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 999994 66 78899999999999999875543322 22335566778899999 99999999999
Q ss_pred cccccccccccccccccchhhh-----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 319 TNSVHEKNYWQGLVLFDILVCE-----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
. +++||+.+++ ......+|...+..+.++|+|..+++. +|++.
T Consensus 230 ~-----------I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 230 T-----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp C-----------EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred E-----------EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 8 8999998875 344456788999999999999877764 88875
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-27 Score=222.19 Aligned_cols=269 Identities=12% Similarity=0.057 Sum_probs=204.8
Q ss_pred ceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE--EEecCceEEEEEeeecc---ccccCCCcceEEee
Q psy4571 48 DAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI--SCILNISILFFEIIFTQ---NFPFPLSRQDVAWH 112 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~s 112 (437)
.++++++.|+.|++|+..++. +..+.+++....+ ++..++.|++||...++ .+.....+.+++|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 467889999999999965433 5566777777765 33478899999975443 33455689999999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
|++..++++++.++.|++||+. ..+.+..+.. ...+.+++|+|+++.++++++.|+.|++||+++++. ...+..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~ 157 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTT---SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSVG 157 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETT---TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEECC
T ss_pred CCCCEEEEEECCCCEEEEEECC---CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEecC
Confidence 9544344566677999999998 4455555554 457899999999997558899999999999998654 5566544
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-- 270 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-- 270 (437)
..+.+++|+|+++.++++++.|+.|++||+++... +... .+...+.+++|+|+++.+++++.
T Consensus 158 -~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--------------~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 158 -RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--------------IDTV-KVEAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--------------EEEE-ECSSEEEEEEECTTSSEEEEEEECS
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--------------EEEE-ecCCCccceEECCCCCEEEEEecCc
Confidence 56799999999997667888999999999987532 2223 34567899999999995444443
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc-cccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST-ASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.++.|++||+++++.+..+.. +..+..++|+|+|+.+ ++++.++. +++||+.+++.+..+..|.
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~s~~~d~~-----------v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFXNT-----------VSVIDTATNTITATMAVGK 286 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTE-----------EEEEETTTTEEEEEEECSS
T ss_pred CCCcEEEEECCCCeEEEEEec----CCCccEEEEccCCCEEEEEcCCCCE-----------EEEEECCCCcEEEEEECCc
Confidence 799999999998876665543 3345678999999977 66677877 8999999999988887776
Q ss_pred ccc
Q psy4571 350 EES 352 (437)
Q Consensus 350 ~~~ 352 (437)
.+.
T Consensus 287 ~~~ 289 (391)
T 1l0q_A 287 NPY 289 (391)
T ss_dssp SEE
T ss_pred CCC
Confidence 553
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=230.32 Aligned_cols=261 Identities=12% Similarity=0.073 Sum_probs=195.8
Q ss_pred CceeEEEecCCCCeE-EEecCceEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee
Q psy4571 67 PFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 144 (437)
..+.++.|++++..+ +++.|++|+ |....+.+ .++..|.+++|+|+ + .++.+.+|+.+ ... +..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPd-g-------~~~~~~~~~~~---~~~-~~~ 81 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPL-E-------FENKLDFELAQ---QNG-LLN 81 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECC-C-------CCCTTTTSCCC---SSC-SST
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCC-C-------CcceEEEEeCC---Cce-Eee
Confidence 667889999999887 557788888 76555543 46778999999995 4 46655555543 222 222
Q ss_pred eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC-----ceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD-----EIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 145 ~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
+ .|...|.+++|+|+|.. ||+++.||.|++||.+. .+..+. |.. .|.+++|+|+|+. |++|+.||+|+
T Consensus 82 ~-~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~-LAsgs~DGtVk 154 (588)
T 2j04_A 82 S-QPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESS-IVVGNEDGELQ 154 (588)
T ss_dssp T-SCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSC-EEEEETTSEEE
T ss_pred c-CCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCE-EEEEcCCCEEE
Confidence 2 45788999999999996 99999999999999654 355666 665 4999999999995 99999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEe----cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee-eeeec
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIH----GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM-RLDSI 294 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~ 294 (437)
+||+..+..... ..-.+..+ .+|...|.+++|+|+| +++++.|+.|++||+.+++..... .....
T Consensus 155 IWd~~~~~l~~~-------~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 155 FFSIRKNSENTP-------EFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp EEECCCCTTTCC-------CCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECC
T ss_pred EEECCCCccccc-------cceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccc
Confidence 999987532110 00123444 6788899999999998 668899999999999887643111 11123
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCC--CCCCcccccc-----
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS--SDNDTEDLNS----- 367 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~--~~~~~~~~~~----- 367 (437)
+...+..++|+ |+.+++++ ++. |++||+.+++......||.+.+..+.+ +|++..++.+
T Consensus 225 h~~~V~svaFs--g~~LASa~-~~t-----------IkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 225 SRRKITDLKIV--DYKVVLTC-PGY-----------VHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CSSCCCCEEEE--TTEEEEEC-SSE-----------EEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred ccCcEEEEEEE--CCEEEEEe-CCe-----------EEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 45678888999 68888887 466 899999988774444489999999999 9999766554
Q ss_pred -ccccC
Q psy4571 368 -IWSMT 372 (437)
Q Consensus 368 -~w~~~ 372 (437)
+|..+
T Consensus 291 klw~~d 296 (588)
T 2j04_A 291 KVLLED 296 (588)
T ss_dssp EEEESS
T ss_pred EEEeec
Confidence 66665
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=226.15 Aligned_cols=237 Identities=11% Similarity=0.024 Sum_probs=193.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC-cEEEEEeCCCeEEEEeC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE-YILATGSADKTVALWDL 179 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~sgs~dg~i~lwd~ 179 (437)
.+...|.+++|+| ++.+|++++.||.|++||+...........+.+|...|.+++|+|++. . |++|+.||.|++||+
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ-IYVGTVQGEILKVDL 86 (342)
T ss_dssp CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEE-EEEEETTSCEEEECS
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcE-EEEEcCCCeEEEEEe
Confidence 4677899999999 688999999999999999985432223556668999999999999988 6 999999999999999
Q ss_pred -CCCceeeeEecc--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC---------CCCCCCCCCCCCCCCceEEEec
Q psy4571 180 -RNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---------IGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 180 -~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
.++. ...+.+ |...|.+++|+| +. .+++++.|+.|++||+++ ...... +.
T Consensus 87 ~~~~~--~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------------~~ 148 (342)
T 1yfq_A 87 IGSPS--FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN--------------TK 148 (342)
T ss_dssp SSSSS--EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSS--------------SS
T ss_pred ccCCc--eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeE--------------Ee
Confidence 7754 467778 999999999999 76 699999999999999986 433332 33
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecC-CCCcccccCCCCccccccc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASP-TASSTASESPTPTNSVHEK 325 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~~~~~~ 325 (437)
|...|.+++|+|++ +++++.|+.|++||+++ +....... ...+...+..++|+| ++.++++++.++.
T Consensus 149 -~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~dg~------ 217 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGYACSSIDGR------ 217 (342)
T ss_dssp -SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEEEEEETTSE------
T ss_pred -eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceee-ecCCCCceeEEEECCCCCCEEEEEecCCc------
Confidence 78899999999886 77999999999999998 55432222 222455677789999 9999999999998
Q ss_pred ccccccccccchhh------hhhhhhcCCCc---------cccccCCCCCCcccccc-------ccccCH
Q psy4571 326 NYWQGLVLFDILVC------EEQRQLLGTEE---------ESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 326 ~~~~~i~~wd~~~~------~~~~~~~~h~~---------~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+++||+..+ +....+.+|.. .+..+.++|++..+++. +|++..
T Consensus 218 -----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 218 -----VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp -----EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred -----EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 788888777 77777888865 89999999999877664 888754
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=220.12 Aligned_cols=238 Identities=10% Similarity=-0.005 Sum_probs=170.2
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc-----ccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ-----NFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~-----~~~~~~~v~~~~ 110 (437)
.|.+++|+ |. +++|+.|+++++|+... .+.+|+....+ ...+...|.+++
T Consensus 78 ~v~~~~~~-~~---~~s~s~D~~i~~w~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 132 (343)
T 3lrv_A 78 NPRTGGEH-PA---IISRGPCNRLLLLYPGN---------------------QITILDSKTNKVLREIEVDSANEIIYMY 132 (343)
T ss_dssp CCCTTCCC-CS---EEEECSTTEEEEEETTT---------------------EEEEEETTTCCEEEEEECCCSSCEEEEE
T ss_pred CceeeeeC-Cc---eEEecCCCeEEEEEccC---------------------ceEEeecCCcceeEEeecCCCCCEEEEE
Confidence 45556666 54 88888888888888654 12233322221 123446799999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
|+|. ++.+|++|+.||+|++||+++ .+.+... ..|...|.+++|+|++. +|++|+.||.|++||+++++.....
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSR 208 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEE
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccE
Confidence 9992 367999999999999999984 4445444 34556899999999999 5999999999999999997763367
Q ss_pred ecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE--EEEEEccCCCeE
Q psy4571 189 FES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI--SDFSWNPNEPWV 265 (437)
Q Consensus 189 ~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~~p~~~~~ 265 (437)
+.. |.++|++++|+|++. .|++++ |+.|++||+++........ .+..|...+ .+++|+|+|+ +
T Consensus 209 ~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~-~ 274 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYP-----------TYTIPEFKTGTVTYDIDDSGK-N 274 (343)
T ss_dssp CCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSSC-----------CCBC-----CCEEEEECTTSS-E
T ss_pred EeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceeec-----------ccccccccccceEEEECCCCC-E
Confidence 777 999999999999998 588888 5599999999876544321 122233333 4699999999 6
Q ss_pred EEEEeC-CCeEEEEeCCCCCCceeeeeeecccCCceeeeecC---CCCcccccCCCCccccc
Q psy4571 266 ICSVSE-DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP---TASSTASESPTPTNSVH 323 (437)
Q Consensus 266 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~---~g~~l~s~s~d~~~~~~ 323 (437)
+++++. |+.+++|++......... .....+.|+| ++..+++++.|+.+.+.
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EEEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEE
Confidence 778777 999999999776543322 2234457777 88888888888875443
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-27 Score=225.49 Aligned_cols=280 Identities=10% Similarity=0.013 Sum_probs=205.3
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
+.+++|+ |.+.++++++.|+.|++|+..++....... . .....+...+.+++|+| ++
T Consensus 125 ~~~~~~s-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~-------------------~~~~~~~~~v~~~~~~~-~~ 181 (433)
T 3bws_A 125 PKSVRFI-DNTRLAIPLLEDEGMDVLDINSGQTVRLSP--P-------------------EKYKKKLGFVETISIPE-HN 181 (433)
T ss_dssp BCCCEES-SSSEEEEEBTTSSSEEEEETTTCCEEEECC--C-------------------HHHHTTCCEEEEEEEGG-GT
T ss_pred ceEEEEe-CCCeEEEEeCCCCeEEEEECCCCeEeeecC--c-------------------ccccccCCceeEEEEcC-CC
Confidence 4456666 466666666666667777766554432210 0 00112345788999988 68
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v 196 (437)
.++++++.|+.|++||++ ..+.+..+..|...+.+++|+|++..++++++.|+.|++||+++++. ...+.. ...+
T Consensus 182 ~~~~s~~~d~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~-~~~~ 256 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLK---TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDK-IGLP 256 (433)
T ss_dssp EEEEEEGGGTEEEEEETT---TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCC-CSEE
T ss_pred EEEEEECCCCEEEEEECC---CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecC-CCCc
Confidence 899999999999999998 55677778889999999999999997556777899999999998654 555554 4569
Q ss_pred EEEEEcCCCCcEEEEEe--------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 197 FQVQWSPHNETILASSG--------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~--------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+++|+|+++. +++++ .|+.|++||+++++. +. ...|...+.+++|+|+++.++++
T Consensus 257 ~~~~~~~~g~~-l~~~~~~~~~~~~~dg~i~~~d~~~~~~--------------~~-~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 257 RGLLLSKDGKE-LYIAQFSASNQESGGGRLGIYSMDKEKL--------------ID-TIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp EEEEECTTSSE-EEEEEEESCTTCSCCEEEEEEETTTTEE--------------EE-EEEEEECEEEEEECSSTTEEEEE
T ss_pred eEEEEcCCCCE-EEEEECCCCccccCCCeEEEEECCCCcE--------------Ee-eccCCCCcceEEECCCCCEEEEE
Confidence 99999999985 66665 588999999987532 22 23556688999999999878888
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc----cccccccccccccccchhhhhhhh
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN----SVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~----~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++.|+.|++||+++++....+. ....+..++|+|+|+++++++.+... .++.......+++||..+++.+..
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIP----VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCcEEEEec----CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 8999999999999887665554 34556778999999988877653210 011111112389999999998888
Q ss_pred hcCCCccccccCCCCCCcccc
Q psy4571 345 LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 345 ~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+.++. .+..+.++|+|..++
T Consensus 397 ~~~~~-~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 397 WEAGN-QPTGLDVSPDNRYLV 416 (433)
T ss_dssp EECSS-SEEEEEECTTSCEEE
T ss_pred ecCCC-CCceEEEcCCCCEEE
Confidence 87754 578889999998665
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-26 Score=205.76 Aligned_cols=213 Identities=8% Similarity=0.054 Sum_probs=156.1
Q ss_pred cccceeEEEEeeCCC----cceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEe---cCceEEEEEeee-ccc----
Q psy4571 32 HSIYRFYRLCVAEPF----DDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCI---LNISILFFEIIF-TQN---- 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~----~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~---~~~~i~~~~~~~-~~~---- 99 (437)
+..-.|.+++|+ |+ +..+++++.+ +++|+..+ .+.+..+ .++.|++|++.. ++.
T Consensus 109 ~~~~~v~sla~s-pd~~~~~~~l~s~g~~--~~v~~l~~-----------g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~ 174 (356)
T 2w18_A 109 LEIREIRALFCS-SDDESEKQVLLKSGNI--KAVLGLTK-----------RRLVSSSGTLSDQQVEVMTFAEDGGGKENQ 174 (356)
T ss_dssp SSEEEEEEECC-------CCEEEEEEEEE--EEEEEETT-----------TEEEEEESSSTTCEEEEEEECTTSCEEEEE
T ss_pred ccccceEEEEEC-CCccccccEEEeCCCe--EEEEecCC-----------CcEEEecccCCCCcEEEEEECCCCceeeee
Confidence 445567888888 88 8888888755 77786533 3333333 488999999854 322
Q ss_pred cccCCCcceEEeeCC--CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC---CCeEEEEEeCCCCcE----------
Q psy4571 100 FPFPLSRQDVAWHLL--HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT---AEVNCLSFNPYSEYI---------- 164 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~---------- 164 (437)
..++..++.++|+|. ++.+|++|+.|++|+|||++ +++.++++.+|. ..+.+++|+|+|..+
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~---TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w 251 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK---TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKE 251 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT---TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC---CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcc
Confidence 246778899999883 46899999999999999999 567788887654 368888999999853
Q ss_pred -EEEEeCCCeEEEEeCCCCceeeeEe-----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 165 -LATGSADKTVALWDLRNLKLKLHSF-----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 165 -l~sgs~dg~i~lwd~~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+++|+.|++|++||..+++. +..+ .+|...+.+.+++ +. ++++|+.|++|+|||+.+++
T Consensus 252 ~laSGs~D~tIklWd~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~tGk----------- 316 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLS-VGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLLGQ----------- 316 (356)
T ss_dssp ------CCEEEEEEETTTTEE-EEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTTCS-----------
T ss_pred eeeccCCCcEEEEEECCCCEE-EEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCCCc-----------
Confidence 36789999999999998664 4433 3666665555554 55 69999999999999999874
Q ss_pred CCceEEEecCccccEE-EEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 239 PPELLFIHGGHTAKIS-DFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~-~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
++.++.+|...+. .++|+|+|+ +|++|+.|++|++||+
T Consensus 317 ---~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 ---CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ---EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred ---EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 4556788877655 689999999 7889999999999985
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=220.37 Aligned_cols=247 Identities=11% Similarity=0.084 Sum_probs=193.5
Q ss_pred EEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
+++..++.|++||+..++. +.....+.+++|+|++..++++++.|+.|++||+. ..+.+..+..+. .+.+++|
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~---~~~~~~~~~~~~-~v~~~~~ 81 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA---TNNVIATVPAGS-SPQGVAV 81 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT---TTEEEEEEECSS-SEEEEEE
T ss_pred EEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECC---CCeEEEEEECCC-CccceEE
Confidence 4566789999999765443 34556789999999544445777799999999998 455566665554 8999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+|++++++++++.++.|++||+.+++. +..+. +...+.+++|+|+++.++++++.|+.|++||+.+++.
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--------- 150 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--------- 150 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---------
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeE-EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---------
Confidence 999997556777889999999998654 55555 4467899999999997668899999999999987532
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC--
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES-- 315 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-- 315 (437)
+..+..+ ..+.+++|+|+++.++++++.|+.|++||+++++....+. +...+..++|+|+|+++++++
T Consensus 151 -----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 151 -----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp -----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEEC
T ss_pred -----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecC
Confidence 3334444 4579999999999666888999999999999987665554 234566779999999888887
Q ss_pred -CCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccc
Q psy4571 316 -PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 316 -~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
.++. +++||+.+++.+..+..|.. +..+.++|+|..+
T Consensus 221 ~~~~~-----------v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l 258 (391)
T 1l0q_A 221 KYFNT-----------VSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKV 258 (391)
T ss_dssp SSCCE-----------EEEEETTTTEEEEEEECCSS-EEEEEECTTSSEE
T ss_pred cCCCc-----------EEEEECCCCeEEEEEecCCC-ccEEEEccCCCEE
Confidence 4555 89999999998888888764 6778899998755
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-25 Score=206.50 Aligned_cols=236 Identities=14% Similarity=0.168 Sum_probs=176.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe--
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW-- 111 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~-- 111 (437)
...|.+++|+ |++++|++|+.|+.|++|+..++.+... ..+...|.+++|
T Consensus 86 ~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~---------------------------~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 86 TGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQI---------------------------AQHDAPVKTIHWIK 137 (368)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEE---------------------------EECSSCEEEEEEEE
T ss_pred cCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceee---------------------------ccccCceEEEEEEe
Confidence 4456677777 6777777777777777777665543321 135578899999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE- 190 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~- 190 (437)
+| ++.+|++++.||.|++||++ ..+.+..+..+. .+.++.+.+ . .+++++.++.+++|+++..........
T Consensus 138 ~~-~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~-~~~~~~~~~--~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 209 (368)
T 3mmy_A 138 AP-NYSCVMTGSWDKTLKFWDTR---SSNPMMVLQLPE-RCYCADVIY--P-MAVVATAERGLIVYQLENQPSEFRRIES 209 (368)
T ss_dssp CS-SCEEEEEEETTSEEEEECSS---CSSCSEEEECSS-CEEEEEEET--T-EEEEEEGGGCEEEEECSSSCEEEEECCC
T ss_pred CC-CCCEEEEccCCCcEEEEECC---CCcEEEEEecCC-CceEEEecC--C-eeEEEeCCCcEEEEEeccccchhhhccc
Confidence 77 67889999999999999998 456666776654 677777774 4 488999999999999998655333332
Q ss_pred cCCCceEEEEEcCCCC---cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc------------cEEE
Q psy4571 191 SHKDEIFQVQWSPHNE---TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA------------KISD 255 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~ 255 (437)
.+...+.++++.++.. ..+++|+.||.|++||++..... ..+..+.+|.. .|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-----------KDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-----------HHSEEEECSEEC----CCCEEECCEEE
T ss_pred cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-----------ccceeeeeeecccccccccccccceEE
Confidence 3445566676665543 13889999999999999876321 22344556655 7999
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
++|+|+++ +|++++.||.|++||+++++++..+.. +...+..++|+|+|++|++++.|+..
T Consensus 279 ~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 279 IAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTSEQ---LDQPISACCFNHNGNIFAYASSYDWS 339 (368)
T ss_dssp EEECTTTC-CEEEEETTSCEEEEETTTTEEEEECCC---CSSCEEEEEECTTSSCEEEEECCCST
T ss_pred EEEecCCC-EEEEEccCCeEEEEECCCCcEEEEecC---CCCCceEEEECCCCCeEEEEeccccc
Confidence 99999998 788999999999999999877766653 45677788999999999999988763
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=204.66 Aligned_cols=251 Identities=12% Similarity=0.045 Sum_probs=180.4
Q ss_pred eecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc--cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC
Q psy4571 62 WKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP--FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 139 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~ 139 (437)
.+.|.+.+..+.|++++..++++.+..+++|+........ ....+..+++.+.++.++++|+.|++|++||.. ..
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~---~~ 91 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV---KK 91 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT---TT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC---CC
Confidence 3567788999999999999988888889999976443321 123688899998544444678888999999998 45
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE--EeCCCe
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS--SGTDRR 217 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s--g~~dg~ 217 (437)
+.+..+. |...|.+++|+++. ++++ .|+.|++||+.+....+..+.. +...+++++ .. ++. |+.||.
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~-la~~sg~~~g~ 160 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GL-LVYSNEFNLGQ 160 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TE-EEEEESSCTTC
T ss_pred cEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cE-EEEeCCCcCcE
Confidence 5666665 66799999999763 3333 4789999999986233555543 455667777 33 444 688999
Q ss_pred EEEEEcCCCCCCCCCCCCC-CCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCe-EEEEeCCCCCCceeeeeeec
Q psy4571 218 LHVWDLSKIGEEQSTEDAE-DGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNI-MQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~-~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~ 294 (437)
|++||++++.......... .....+ +..+.+|...|++++|+|+|+ +|++|+.|++ |++||+++++++..+.. ..
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~~~~~~-g~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVLVREFRR-GL 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCEEEEEEC-TT
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcEEEEEEc-CC
Confidence 9999998764221100000 000112 566889999999999999999 8999999998 99999999988776642 11
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+...+..++|+|+|+++++++.|++ +++||+..+
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~-----------v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWT-----------LHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCE-----------EEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCE-----------EEEEEccCC
Confidence 4566778899999999999999998 788887655
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-24 Score=211.87 Aligned_cols=303 Identities=10% Similarity=0.061 Sum_probs=221.5
Q ss_pred eeCCCcceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE-EEecCceEEEEEe--eecc---ccccCCC
Q psy4571 42 VAEPFDDAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI-SCILNISILFFEI--IFTQ---NFPFPLS 105 (437)
Q Consensus 42 ~~~~~~~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i-~~~~~~~i~~~~~--~~~~---~~~~~~~ 105 (437)
|+ |++.++++++.|++|++||..++. +..+.+++++..+ ++..++.|.+||+ ...+ .++....
T Consensus 145 ~~-p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~ 223 (543)
T 1nir_A 145 LD-LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE 223 (543)
T ss_dssp CC-GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred cC-CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC
Confidence 66 888999999999999999966543 4556677777766 5667899999998 4433 3445567
Q ss_pred cceEEeeC----CCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc----------CC-CCeEEEEEeCCCCcEEEEEe
Q psy4571 106 RQDVAWHL----LHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA----------HT-AEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 106 v~~~~~sp----~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~----------h~-~~v~~l~~~~~~~~~l~sgs 169 (437)
+..++|+| + ++++++++ .+++|.+||.. ..+++..+.. |. ..+..+.++|++..++++..
T Consensus 224 p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~---t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGE---TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCT-TTEEEEEEEESSEEEEEETT---TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCC-CCEEEEEEccCCeEEEEecc---ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 78999999 6 45555555 58999999988 4566665543 22 37899999999888888999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-- 247 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (437)
.++.|.+||..+.+........+...+.+++|+|+|+++++++..+++|.+||+.+++... .+.
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~--------------~i~~g 365 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA--------------LVDVG 365 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE--------------EEECS
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE--------------eeccC
Confidence 9999999999886542222224566788999999999867777779999999999864332 232
Q ss_pred --CccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCC-------CCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 248 --GHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDST-------DSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 248 --~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
.|.+....+ ++|++..+++++. .|++|.+||+.+ .++++++.. +..+...++++|+|+.|.+++.-
T Consensus 366 ~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~---~g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 366 KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG---QGGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC---SCSCCCCEECCTTCCEEEECCTT
T ss_pred CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc---CCCCceEEEcCCCCCcEEEecCC
Confidence 254433333 5787554788876 689999999998 666666654 34566788999999999998731
Q ss_pred Ccccccccccccccccccchhhhhh-hhh--------cCCCccccccCCCCCCcccccccccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQ-RQL--------LGTEEESSDRHSSDNDTEDLNSIWSM 371 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~-~~~--------~~h~~~~~~~~~~~~~~~~~~~~w~~ 371 (437)
+- +....+.|.+||+.+++.. ..+ ..+...+....++|+|+.+..++|.-
T Consensus 442 ~~----~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 442 NP----DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp CS----SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CC----CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 10 0001112899999998876 332 35566788889999999888888854
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-23 Score=202.46 Aligned_cols=288 Identities=11% Similarity=0.036 Sum_probs=205.6
Q ss_pred eeEEEEeeCCCcceEEEeec----cC----ceEeeec--CCCcee-EEEecCC--------------------------C
Q psy4571 36 RFYRLCVAEPFDDAVEERVI----NE----EYKIWKK--NTPFLY-DLVVNNY--------------------------V 78 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~----d~----~v~iw~~--~~~~~~-~~~~~~~--------------------------~ 78 (437)
.+....|.....+.+++|+. || ++++||. .++... ...+..+ .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 45556666444567778873 46 8999999 776643 2222111 2
Q ss_pred CeE-EEecC------ceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCC---cEEEEEcCCCCCCCCeeee
Q psy4571 79 ANI-SCILN------ISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQ---KLMIWDTRSHNVSKPSHTV 145 (437)
Q Consensus 79 ~~i-~~~~~------~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg---~v~vwd~~~~~~~~~~~~~ 145 (437)
..+ .+..+ +.|++||...... ..+...+.+++|+| ++..|++++.++ .|++||+.++ +. ..+
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg---~~-~~l 218 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANG---AV-RQV 218 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTC---CE-EEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCC---cE-EEe
Confidence 333 33332 7999999753322 23567899999999 678888888875 9999999843 33 356
Q ss_pred ccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-CC--eEEE
Q psy4571 146 DAHTAEVNCLSFNPYSEYILATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DR--RLHV 220 (437)
Q Consensus 146 ~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg--~i~v 220 (437)
..|.+.+.+++|+|+|+.++++++.|+. |.+||+++++ ...+..|...+.+++|+|+|+. |++++. ++ .|.+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYK 295 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEE
Confidence 6788899999999999974447777665 9999999855 4567778889999999999996 555554 55 6777
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC---CCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE---DNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
||+.++.. ..+..|...+.+++|+|+|++ |+.++. +..|++||+.+++.. .+.. ..
T Consensus 296 ~d~~~~~~---------------~~l~~~~~~~~~~~~spdG~~-l~~~~~~~g~~~i~~~d~~~~~~~-~l~~----~~ 354 (415)
T 2hqs_A 296 VNINGGAP---------------QRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQDLATGGVQ-VLSS----TF 354 (415)
T ss_dssp EETTSSCC---------------EECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEEETTTCCEE-ECCC----SS
T ss_pred EECCCCCE---------------EEEecCCCcccCeEECCCCCE-EEEEECcCCceEEEEEECCCCCEE-EecC----CC
Confidence 88877532 223456668899999999994 545544 358999999987652 2221 22
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCC
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDND 361 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~ 361 (437)
....++|+|+|+.+++++.++. ...+++||+. ++..+.+.+|...+...+++|..
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~--------~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGM--------GSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETT--------EEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CcCCeEEcCCCCEEEEEEcCCC--------ccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 5677899999999988876552 0128899986 66678899999999999888853
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-24 Score=206.51 Aligned_cols=306 Identities=10% Similarity=0.080 Sum_probs=208.2
Q ss_pred ceeEEecCCcccccceeEEEEeeCCCcc-eEEEeeccCceEeeecC-CCceeEEE---ecCCCCeEEE------------
Q psy4571 21 AFFTWSALPLSHSIYRFYRLCVAEPFDD-AVEERVINEEYKIWKKN-TPFLYDLV---VNNYVANISC------------ 83 (437)
Q Consensus 21 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~-~~~~~~~~---~~~~~~~i~~------------ 83 (437)
.-++.+..........+..+.|+ |... .+..+......+++... ...++.+. +.+....+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 92 (433)
T 3bws_A 14 FSLLSSPINREKNGTEIVKFSIH-PYKGTVIRLGEEILPFKVLEMDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYR 92 (433)
T ss_dssp -------------CEEEEEEEEE-CCTTCEEEETTEECCEEEEEEETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEE
T ss_pred eeeecCccccccCCcEEEEEecc-cccCceEEcCceecceeeeecccCCccEEEEEeeccCCCcEEEEEEccccCcceee
Confidence 33444455555666677778888 5543 33333333334444422 23345555 4444333211
Q ss_pred ---ecCc--eEEEEEee-----eccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-----eeccC
Q psy4571 84 ---ILNI--SILFFEII-----FTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-----TVDAH 148 (437)
Q Consensus 84 ---~~~~--~i~~~~~~-----~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-----~~~~h 148 (437)
..++ .|..+|.. ....+.....+.+++|+| ++.++++++.++.|++||+.+ .+... .+.+|
T Consensus 93 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~ 168 (433)
T 3bws_A 93 IRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINS---GQTVRLSPPEKYKKK 168 (433)
T ss_dssp ESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTT---CCEEEECCCHHHHTT
T ss_pred ecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCC---CeEeeecCccccccc
Confidence 1223 33344431 122344556778999999 788888888899999999984 34444 45588
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
.+.|.+++|+|++. ++++++.|+.|++||+++++. ...+..|...+.+++|+|+++.++++++.|+.|++||+++++.
T Consensus 169 ~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 169 LGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAY-KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp CCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCE-EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceE-EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 99999999999888 599999999999999998665 6777788999999999999997667777899999999987532
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--------CCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
+..+.. ...+.+++|+|+++ .+++++ .|+.|++||+++++....+.. ...+.
T Consensus 247 --------------~~~~~~-~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~----~~~~~ 306 (433)
T 3bws_A 247 --------------IRKTDK-IGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP----PGNKR 306 (433)
T ss_dssp --------------EEECCC-CSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE----EECEE
T ss_pred --------------EEEecC-CCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCcEEeeccC----CCCcc
Confidence 233434 34689999999999 555665 588999999998866555432 23566
Q ss_pred eeeecCCCCc-ccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 301 SSTASPTASS-TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 301 ~~~~s~~g~~-l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
.++|+|+|+. +++++.++. +++||+.+++.+..+. +...+..+.++|+|..+.
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~-----------v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSK-----------IEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEECSSTTEEEEEETTTTE-----------EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred eEEECCCCCEEEEEecCCCE-----------EEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 7899999974 466677877 8999999888777665 555688889999987544
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-22 Score=198.66 Aligned_cols=289 Identities=7% Similarity=0.006 Sum_probs=211.7
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeec--CCCc----------eeEEEecC----CCCeEEEe--cCceEEEEEeeecc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKK--NTPF----------LYDLVVNN----YVANISCI--LNISILFFEIIFTQ 98 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~--~~~~----------~~~~~~~~----~~~~i~~~--~~~~i~~~~~~~~~ 98 (437)
+..++|+ |+++++++++.|++|++||. .++. ...+.+++ ++..+.+. .+++|.+||....+
T Consensus 181 ~~~v~~s-pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMS-ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEEC-CCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 6788999 99999999999999999998 5433 45667787 77766333 47899999964332
Q ss_pred c---cc-----------cC-CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc
Q psy4571 99 N---FP-----------FP-LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163 (437)
Q Consensus 99 ~---~~-----------~~-~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 163 (437)
. +. ++ ..+..+.++|++..++++...++.|.+||+.+..... +..+ .+...+.+++|+|+|++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE-ECCSSCCCEEECTTSCE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe-ccCcCccCceECCCCCE
Confidence 2 11 11 2678999999777788888889999999998532211 1233 35667889999999998
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEecc----CCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFES----HKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+++++..+++|.+||+++++. ...+.. |.+....+ ++|++..+++++. .|++|.+||+.+..... .
T Consensus 338 l~va~~~~~~v~v~D~~tg~l-~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~-------~ 408 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ-------Y 408 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTEE-EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT-------T
T ss_pred EEEEecCCCeEEEEECCCCeE-EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch-------h
Confidence 666667799999999999765 555543 55444333 5787555788876 68999999998743211 1
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEe-------CCCeEEEEeCCCCCCc-eeeeee-----ecccCCceeeeec
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVS-------EDNIMQEYCDSTDSDT-KTMRLD-----SIRSNGGISSTAS 305 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-------~dg~i~iwd~~~~~~~-~~~~~~-----~~~~~~~~~~~~s 305 (437)
..+.+.++.+|...+..++++|+++ .|++++ .+++|.+||+.+++.. ..+... ..+...+..++|+
T Consensus 409 ~~~~v~~l~~~g~~~~~v~~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 487 (543)
T 1nir_A 409 AWKKVAELQGQGGGSLFIKTHPKSS-HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN 487 (543)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCC-EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEEC
T ss_pred cCeEEEEEEcCCCCceEEEcCCCCC-cEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCC
Confidence 2466788889988889999999999 565655 2779999999999877 333221 1124557778999
Q ss_pred CCCCccccc-----CCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 306 PTASSTASE-----SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 306 ~~g~~l~s~-----s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
|+|+.+..+ +.++. |.+||..|+++++.+....
T Consensus 488 ~~g~~~~~s~~~~~~~~~~-----------i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 488 KRGDEVWFSVWNGKNDSSA-----------LVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp SSSSEEEEEEECCTTSCCE-----------EEEEETTTTEEEEEECCTT
T ss_pred CCCCEEEEEeecCCCCCCe-----------EEEEECCCceEEEeecCCC
Confidence 999988854 23555 8999999999988887643
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-21 Score=179.84 Aligned_cols=276 Identities=9% Similarity=0.056 Sum_probs=187.3
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 119 (437)
..|......++++++.++.|++|+..++.+......+ ...+ .++|+|++..++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--------------------------~~~~-~~~~s~dg~~l~ 55 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG--------------------------YDFV-DTAITSDCSNVV 55 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC--------------------------CCEE-EEEECSSSCEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc--------------------------CCcc-eEEEcCCCCEEE
Confidence 3456455666888899999999998887765543211 1234 899999533345
Q ss_pred EEEECCCcEEEEEcCCCCCCCC-eeeeccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEeccCCCc
Q psy4571 120 GSVADDQKLMIWDTRSHNVSKP-SHTVDAHTAEVNCLSFNPYSEYILATGSADK---TVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 120 ~~~~~dg~v~vwd~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+++..++.|.+||+.+ .+. ...+..+..+..+++|+|++++ ++++..++ .|.+||+++++. +..+.. ...
T Consensus 56 ~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~ 129 (331)
T 3u4y_A 56 VTSDFCQTLVQIETQL---EPPKVVAIQEGQSSMADVDITPDDQF-AVTVTGLNHPFNMQSYSFLKNKF-ISTIPI-PYD 129 (331)
T ss_dssp EEESTTCEEEEEECSS---SSCEEEEEEECSSCCCCEEECTTSSE-EEECCCSSSSCEEEEEETTTTEE-EEEEEC-CTT
T ss_pred EEeCCCCeEEEEECCC---CceeEEecccCCCCccceEECCCCCE-EEEecCCCCcccEEEEECCCCCe-EEEEEC-CCC
Confidence 5555589999999984 444 5566666666656999999996 66555553 899999998654 555543 455
Q ss_pred eEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 196 IFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
..+++|+|+|+++++++..++. |.+|++......... . .... .....+..++|+|+|+++++++..++.
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~--------~-~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT--------G-QEFI-SGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE--------E-EEEE-CSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec--------C-Cccc-cCCCCccceEECCCCCEEEEEeCCCCe
Confidence 6999999999877777777788 999999864322110 0 1111 334457999999999977777778999
Q ss_pred EEEEeCCCCCC---ceeeeeeecccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhh--hhhhcCC
Q psy4571 275 MQEYCDSTDSD---TKTMRLDSIRSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEE--QRQLLGT 348 (437)
Q Consensus 275 i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~h 348 (437)
|++||+.+++. +..+. ....+..++|+|+|++++.+. .++. +.+||..+++. +..+..+
T Consensus 200 v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~-----------i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 200 IGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVYVLTESTVD-----------VFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp EEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEEEECSSEEE-----------EEEEETTTTEEEEEEEEECC
T ss_pred EEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEEEEEcCCCE-----------EEEEECCCCceeeecccccc
Confidence 99999999887 44443 234566789999999766554 3444 78899988876 3332222
Q ss_pred ----Cccc---cccCCCCCCcccccc--------ccccCH
Q psy4571 349 ----EEES---SDRHSSDNDTEDLNS--------IWSMTD 373 (437)
Q Consensus 349 ----~~~~---~~~~~~~~~~~~~~~--------~w~~~~ 373 (437)
.... ..+.++|+|..+... +|++..
T Consensus 265 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 265 LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 2222 235889999865432 677643
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-21 Score=178.87 Aligned_cols=271 Identities=8% Similarity=0.027 Sum_probs=191.1
Q ss_pred eeEEEEeeCCCcceEEEeec-------cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 36 RFYRLCVAEPFDDAVEERVI-------NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~-------d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+++.++|+ |+++.+++++. ++.|.+|+..++.+.... .....+..
T Consensus 42 ~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---------------------------~~~~~~~~ 93 (353)
T 3vgz_A 42 GAYEMAYS-QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---------------------------HNDLKPFG 93 (353)
T ss_dssp SEEEEEEE-TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---------------------------EESSCCCS
T ss_pred CccceEEC-CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---------------------------ecCCCcce
Confidence 45566777 66666666553 446667766555443322 12234678
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC---------CeEEEEEeCCCCcEEEEE-eCCCeEEEEe
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA---------EVNCLSFNPYSEYILATG-SADKTVALWD 178 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~---------~v~~l~~~~~~~~~l~sg-s~dg~i~lwd 178 (437)
++|+|++..++++...++.|.+||.. ..+.+..+..+.. .+.+++|+|+++++++++ +.++.|.+||
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAK---TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCC---CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 99999544466666668999999998 4455555554432 278999999999744444 3588999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
.++++. ...+..+...+.+++|+|+++. +++++.++.|.+||+.+++...... ....++...+.+++|
T Consensus 171 ~~~~~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 171 GGNIKL-KTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKK----------LLDDGKEHFFINISL 238 (353)
T ss_dssp TTTTEE-EEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEE----------CCCSSSCCCEEEEEE
T ss_pred CCCCce-EEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEE----------cCCCCCCcccceEEE
Confidence 998665 5666545666889999999985 7777889999999998764322200 001134557889999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccc-cCCCCcccccccccccccccccch
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTAS-ESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s-~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+|+++.++++...++.|.+||..+++....+... ....++|+|+|+.++. ...++. +.+||..
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~~~~-----------v~~~d~~ 302 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-----ESLAVLFNPARNEAYVTHRQAGK-----------VSVIDAK 302 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS-----SCCCEEEETTTTEEEEEETTTTE-----------EEEEETT
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-----CCceEEECCCCCEEEEEECCCCe-----------EEEEECC
Confidence 9999966666667799999999998877766542 2356799999995544 445666 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+++.+..+.... ....+.++|+|+.+..
T Consensus 303 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 303 SYKVVKTFDTPT-HPNSLALSADGKTLYV 330 (353)
T ss_dssp TTEEEEEEECCS-EEEEEEECTTSCEEEE
T ss_pred CCeEEEEEecCC-CCCeEEEcCCCCEEEE
Confidence 998887776654 5678889999975444
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-22 Score=203.90 Aligned_cols=294 Identities=8% Similarity=0.015 Sum_probs=206.2
Q ss_pred ccceeEEEEeeCCCcceEEEeec-cC-----ceEeeecCCCc-----------------------------------eeE
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVI-NE-----EYKIWKKNTPF-----------------------------------LYD 71 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~-d~-----~v~iw~~~~~~-----------------------------------~~~ 71 (437)
....+.+++|+ |+++.|++++. |+ .|++|+..++. +..
T Consensus 35 ~~~~~~~~~~S-pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 35 SGPTLMKPKVA-PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp TCCCCEEEEEC-TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCCceEe-cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 34568899999 99999999998 88 89999976543 345
Q ss_pred EEecCCCCeEEEecCceEEEEEeeec---cccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFT---QNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV 145 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~---~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 145 (437)
+.|++++..+....++.|.+||+..+ .... +...+.+++|+| +++.|+.++ ++.|++||+.+ .+.....
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~---g~~~~~~ 188 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLAS---GRQMQLT 188 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTT---TEEEECC
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCC---CCEEEec
Confidence 66788888887777799999998766 3222 345789999999 678888777 56899999984 2333332
Q ss_pred ccCCCC----------------eEEEEEeCCCCcEEEEEeCCC---------------------------------eEEE
Q psy4571 146 DAHTAE----------------VNCLSFNPYSEYILATGSADK---------------------------------TVAL 176 (437)
Q Consensus 146 ~~h~~~----------------v~~l~~~~~~~~~l~sgs~dg---------------------------------~i~l 176 (437)
..+... +.+++|+|||++ |++++.|+ .|.+
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 233322 478999999997 77777665 7899
Q ss_pred EeCCC-CceeeeEec--cCCCceEEEEEcCCCCcEEEEEe----CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 177 WDLRN-LKLKLHSFE--SHKDEIFQVQWSPHNETILASSG----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 177 wd~~~-~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
||+.+ ++. ..... .|...+..++| |+|+.+++++. .+..|++||+.+++... ....+
T Consensus 268 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--------------~~~~~ 331 (741)
T 2ecf_A 268 ISPAEQAQT-QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV--------------LAHET 331 (741)
T ss_dssp ECSSTTCCC-EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE--------------EEEEE
T ss_pred EECCCCCce-EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE--------------EEEcC
Confidence 99987 664 22222 47788999999 99996443332 35679999998864321 22222
Q ss_pred cc----cEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceee-eecCCCCccc-ccCCCC--cc
Q psy4571 250 TA----KISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISS-TASPTASSTA-SESPTP--TN 320 (437)
Q Consensus 250 ~~----~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~-s~s~d~--~~ 320 (437)
.. .+..++|+|+|+ ++++++.||.+++|.+. .++ ...+.. +...+..+ .|+|+|+.++ +++.++ .
T Consensus 332 ~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~---~~~~v~~~~~~s~dg~~l~~~~~~~~~~~- 405 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTH---GNWSVDELLAVDEKAGLAYFRAGIESARE- 405 (741)
T ss_dssp CSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCC---SSSCEEEEEEEETTTTEEEEEECSSCTTC-
T ss_pred CCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeee---cceEEEeEeEEeCCCCEEEEEEeCCCCce-
Confidence 22 346789999999 88899999988888776 333 333321 22334444 5999998765 444443 4
Q ss_pred cccccccccccccccchh-hhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 321 SVHEKNYWQGLVLFDILV-CEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~-~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+++|++.. ++....+.+ ...+..+.++|+|..++.
T Consensus 406 ----------~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 406 ----------SQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVD 441 (741)
T ss_dssp ----------BEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEE
T ss_pred ----------EEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEE
Confidence 67888865 555666666 445678889999987654
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-21 Score=176.53 Aligned_cols=247 Identities=11% Similarity=-0.011 Sum_probs=169.7
Q ss_pred eeccCceEeeecCC----------CceeEEEecCCCCeEEEecCceEEEEEeee-cccccc-----CCCcceEEeeCCCC
Q psy4571 53 RVINEEYKIWKKNT----------PFLYDLVVNNYVANISCILNISILFFEIIF-TQNFPF-----PLSRQDVAWHLLHE 116 (437)
Q Consensus 53 gs~d~~v~iw~~~~----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~-~~~~~~-----~~~v~~~~~sp~~~ 116 (437)
++.|+++++|+..+ +.+..+.+++.+..+.+..++.|.+||+.. .+.... ...+.+++|+| ++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg 96 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DG 96 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECC-CC
Confidence 44566666666433 335566677777777666677788887665 432221 24678999999 67
Q ss_pred CEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 117 SLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 117 ~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+|++++ .++...||.++.. . .....+..+ ..+.+++|+|+++.++++++.|+.+++|+++........+..+..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPST-G-GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETT-C-CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECC-C-CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 8888888 3355666655421 1 223344333 358999999999975558889999999996533333556677888
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC--
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-- 272 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-- 272 (437)
.+.+++|+|+++.+++++..++.+++|++.... ..+..+..|...+.+++|+|+++ .|+.++.+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 239 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------------SSVERITDSAYGDWFPHPSPSGD-KVVFVSYDAD 239 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------------SCEEECCCCSEEEEEEEECTTSS-EEEEEEEETT
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCC-------------CCcEEEecCCcccCCeEECCCCC-EEEEEEcCCC
Confidence 999999999999655555568999999986321 12344566778899999999999 45555544
Q ss_pred ---------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 273 ---------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 273 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
+.|++||+.+++........ .+......++|+|+|+.+++++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLF-GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEE-ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccC-CCCcccccceECCCCCEEEEEEecc
Confidence 57999999987654433321 2345566789999999998887554
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=192.26 Aligned_cols=242 Identities=11% Similarity=0.026 Sum_probs=175.4
Q ss_pred eEEEEEe--eecccc------ccCCCcceEEeeCC-------------CCCEEEEEECC------CcEEEEEcCCCCCCC
Q psy4571 88 SILFFEI--IFTQNF------PFPLSRQDVAWHLL-------------HESLFGSVADD------QKLMIWDTRSHNVSK 140 (437)
Q Consensus 88 ~i~~~~~--~~~~~~------~~~~~v~~~~~sp~-------------~~~~l~~~~~d------g~v~vwd~~~~~~~~ 140 (437)
.+++||+ ..++.+ .+...+..+++++. .+..++.++.+ +.|++||+.. .
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g----~ 169 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG----Y 169 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS----C
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC----C
Confidence 8999999 655432 12334555655541 14455555544 7999999972 3
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADK---TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
....+.+|...+.+++|+|+|++ |++++.++ .|++||+++++. ..+..|...+.+++|+|+|+.++++++.|+.
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred CCEEEeCCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 45677788999999999999996 88888875 999999998664 3566788899999999999975557776665
Q ss_pred --EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC-CC--eEEEEeCCCCCCceeeeee
Q psy4571 218 --LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE-DN--IMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 218 --i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~ 292 (437)
|++||+.++.. ..+..|...+.+++|+|+|+. |+.++. ++ .|++||+.+++.. .+..
T Consensus 247 ~~i~~~d~~~~~~---------------~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~~d~~~~~~~-~l~~- 308 (415)
T 2hqs_A 247 LNLYVMDLASGQI---------------RQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNINGGAPQ-RITW- 308 (415)
T ss_dssp CEEEEEETTTCCE---------------EECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTSSCCE-ECCC-
T ss_pred ceEEEEECCCCCE---------------EeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEEEECCCCCEE-EEec-
Confidence 99999987532 335677888999999999994 555554 55 6888899887532 2221
Q ss_pred ecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 293 SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 293 ~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+......++|+|+|++++.++.+.. ...+++||+.+++. ..+..+. .+....++|+|..++.
T Consensus 309 --~~~~~~~~~~spdG~~l~~~~~~~g--------~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 309 --EGSQNQDADVSSDGKFMVMVSSNGG--------QQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp --SSSEEEEEEECTTSSEEEEEEECSS--------CEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEE
T ss_pred --CCCcccCeEECCCCCEEEEEECcCC--------ceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEE
Confidence 2334556799999999988775421 11289999998876 4566665 6888899999986543
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=180.96 Aligned_cols=259 Identities=13% Similarity=0.107 Sum_probs=179.7
Q ss_pred ecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeC
Q psy4571 84 ILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNP 159 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~ 159 (437)
..++.|.+||....+. ..+...+.+++|+| ++.+|++++ ++.|++||+.+. .+.......+ ...+.+++|+|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGD--PSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSC--CSCEECCCTTCCCBCSCCEECT
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCC--CCceEeccccccccccceEECC
Confidence 4678899999754432 34577899999999 678888876 789999999840 3444444455 36789999999
Q ss_pred CCCcEEEEEe--CCCeEEEEe--CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 160 YSEYILATGS--ADKTVALWD--LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 160 ~~~~~l~sgs--~dg~i~lwd--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+++. |++++ .++...||. ..+.. ...+..+ ..+..++|+|+++.++++++.|+.+++|+++....
T Consensus 95 dg~~-l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------- 163 (297)
T 2ojh_A 95 DGAL-YAISDKVEFGKSAIYLLPSTGGT--PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------- 163 (297)
T ss_dssp TSSE-EEEEECTTTSSCEEEEEETTCCC--CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-------
T ss_pred CCCE-EEEEEeCCCCcceEEEEECCCCc--eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-------
Confidence 9996 77777 334555554 44433 4444433 45899999999997666888899999999754221
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
....+..|...+.+++|+|+++.+++++..++.+++|++. .+.....+.. +......++|+|+|++++.+
T Consensus 164 ------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 164 ------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD---SAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp ------CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC---CSEEEEEEEECTTSSEEEEE
T ss_pred ------cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec---CCcccCCeEECCCCCEEEEE
Confidence 1233556778899999999999555555579999999986 3434333322 23345567999999999888
Q ss_pred CCCCcccccccccccccccccchhhhhh--hhhcCCCccccccCCCCCCccccc
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCEEQ--RQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~~~--~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.++............+.+||+.+++.. ..+.+|...+..+.++|+|..++.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 7653211111111123899999888763 334578888999999999986553
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.7e-21 Score=176.31 Aligned_cols=260 Identities=9% Similarity=0.093 Sum_probs=166.1
Q ss_pred eEEEeeccCceEeeecC-C------------CceeEEEecCCCCeEE-EecC-ceEEEEEee--ecc-----ccccCCCc
Q psy4571 49 AVEERVINEEYKIWKKN-T------------PFLYDLVVNNYVANIS-CILN-ISILFFEII--FTQ-----NFPFPLSR 106 (437)
Q Consensus 49 ~l~tgs~d~~v~iw~~~-~------------~~~~~~~~~~~~~~i~-~~~~-~~i~~~~~~--~~~-----~~~~~~~v 106 (437)
++++++.|+.|++|+.. + +.+..+.+++.+..+. +..+ +.|.+|++. .+. .+.....+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 86 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC
Confidence 44445778888888753 1 2234455667766553 3333 788888875 221 22334578
Q ss_pred ceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCC-Cc
Q psy4571 107 QDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRN-LK 183 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~-~~ 183 (437)
..++|+| ++..+++++ .++.|.+||+..+...+....+..+ ..+.+++|+|++++ +++++ .++.|.+||+.+ ++
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~-l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 87 THISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRT-LWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp SEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSE-EEEEEGGGTEEEEEEECTTSC
T ss_pred cEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCE-EEEecCCCCEEEEEEecCCCc
Confidence 9999999 566555554 5889999999522123344444433 45889999999997 55555 899999999987 43
Q ss_pred eee-e--Eecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-C--ccccEEEE
Q psy4571 184 LKL-H--SFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-G--HTAKISDF 256 (437)
Q Consensus 184 ~~~-~--~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~--h~~~v~~l 256 (437)
... . .... ....+..++|+|+++++++++..++.|.+|++......... ...+.... + ....+.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-------VQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-------EEEEECSCTTCCSCCCEEEE
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-------EeeccccCccccccCCccce
Confidence 211 1 2222 34578899999999976667668999999999642211100 00011111 1 13457789
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccC-CCCc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASES-PTPT 319 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~ 319 (437)
+|+|+|+++++++..++.|++||+.... ....+.... ....+..++|+|+|+++++++ .++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-TETQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-CSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-CCCccceEEECCCCCEEEEecCCCCe
Confidence 9999999677677789999999998311 122222111 123366789999999887776 4566
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.3e-22 Score=190.01 Aligned_cols=228 Identities=14% Similarity=0.140 Sum_probs=156.3
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
....+..++++ +.+.++++++.|+ +++|+...-... ...... ...+........++++..|.+++|+
T Consensus 35 ~~~~~n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~v~~l~~s 101 (434)
T 2oit_A 35 PKERSSLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQ--NKPGDD---------PNKIVDKVQGLLVPMKFPIHHLALS 101 (434)
T ss_dssp CCSCCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCC--CCTTCC---------TTCEEECCCCEEECCSSCEEEEEEC
T ss_pred CCCCccEEEEe-cCCCEEEEECCCE-EEEEEchHhhhh--cccccC---------cccccccCccccccCCCcccEEEEc
Confidence 34457788888 7888888888887 888774321100 000000 0001111112234456789999999
Q ss_pred CCCCCEEE----EEECCCcEEEEEcCCC-----CCCC---CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 113 LLHESLFG----SVADDQKLMIWDTRSH-----NVSK---PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 113 p~~~~~l~----~~~~dg~v~vwd~~~~-----~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
| ++.+|+ +|+.|+.|++||+.+. ...+ .+..+.+|...|.+++|+|++..+|++++.||+|++||++
T Consensus 102 p-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 102 C-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp T-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred C-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 9 577888 7888999999998743 1111 2455667999999999999854479999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
++.. .....+|...|++++|+|+|++ |++|+.||.|++||++ +......... . .....|...|.+++|++
T Consensus 181 ~~~~-~~~~~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~-~~~~~~~~~~----~---~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 181 ETVK-VCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT-LQEKKVIPCP----P---FYESDHPVRVLDVLWIG 250 (434)
T ss_dssp SSEE-EEEEECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTT-CCEEEEECCC----T---TCCTTSCEEEEEEEEEE
T ss_pred CCcc-eeeccCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccC-CcccccccCC----c---ccCCCCceeEEEEEEec
Confidence 8644 5556678899999999999985 8999999999999998 3221110000 0 00013445899999999
Q ss_pred CCCeEEEEEeCCCe------EEEEeCCCCC
Q psy4571 261 NEPWVICSVSEDNI------MQEYCDSTDS 284 (437)
Q Consensus 261 ~~~~~l~s~~~dg~------i~iwd~~~~~ 284 (437)
++.++++..+.||. +++|+++..+
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 88855555556543 8999998753
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=197.55 Aligned_cols=293 Identities=8% Similarity=-0.031 Sum_probs=195.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc--------------eeEEEecCCCCeEEEecC----------ceEEEE
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF--------------LYDLVVNNYVANISCILN----------ISILFF 92 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--------------~~~~~~~~~~~~i~~~~~----------~~i~~~ 92 (437)
+.+++|+ |+++++++ +.|+++++|+..++. +....+++++..+....+ +.+.+|
T Consensus 19 ~~~~~~s-pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 19 DPEAKWI-SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCBS-SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccEEc-CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 5678899 99997776 789999999965432 567788888887755432 788999
Q ss_pred Eeeecccccc------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC---------------
Q psy4571 93 EIIFTQNFPF------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE--------------- 151 (437)
Q Consensus 93 ~~~~~~~~~~------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~--------------- 151 (437)
|+..++...+ ...+..++||| +++.|+.++. +.|++||+.+ .+.......+...
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~---g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVG---KQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSS---SCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred ECCCCceEeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCC---CceEEEecCCCCCceECcccceeEEEEe
Confidence 9876553222 22388999999 6778887775 7999999984 3444444443333
Q ss_pred ---eEEEEEeCCCCcEEEEEeCCC----------------------------------eEEEEeCCCCceeeeEeccC--
Q psy4571 152 ---VNCLSFNPYSEYILATGSADK----------------------------------TVALWDLRNLKLKLHSFESH-- 192 (437)
Q Consensus 152 ---v~~l~~~~~~~~~l~sgs~dg----------------------------------~i~lwd~~~~~~~~~~~~~h-- 192 (437)
+.+++|+|||++ |++++.|+ .|++||+.+++. ...+..+
T Consensus 172 ~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~ 249 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDD 249 (723)
T ss_dssp SSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCC
T ss_pred ccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCcc
Confidence 378999999996 77776543 799999988653 3444443
Q ss_pred ----CCceEEEEEcCCCCcEEEEEe----CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE----EEEEEcc
Q psy4571 193 ----KDEIFQVQWSPHNETILASSG----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI----SDFSWNP 260 (437)
Q Consensus 193 ----~~~v~~v~~~p~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~l~~~p 260 (437)
...+..++|+|||+. +++.+ .+..|++||+.+++.... . ...+...+ ..++|+|
T Consensus 250 ~~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~i~~~d~~~g~~~~~------------~-~~~~~~~~~~~~~~~~~sp 315 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKV-AVTWLNRAQNVSILTLCDATTGVCTKK------------H-EDESEAWLHRQNEEPVFSK 315 (723)
T ss_dssp GGGSSEEEEEEEESSSSEE-EEEEEETTSCEEEEEEEETTTCCEEEE------------E-EEECSSCCCCCCCCCEECT
T ss_pred CCCccceeEEEEEeCCCeE-EEEEEcCCCCeEEEEEEeCCCCcceEE------------E-EeccCCEEeccCCCceEcC
Confidence 567899999999984 65543 235799999987643211 1 11223333 3789999
Q ss_pred CCCeEEEE-EeCCC------eEEEEe-CCCCCC--ceeeeeeecccCCcee-eeecCCCCcccccCCC---Ccccccccc
Q psy4571 261 NEPWVICS-VSEDN------IMQEYC-DSTDSD--TKTMRLDSIRSNGGIS-STASPTASSTASESPT---PTNSVHEKN 326 (437)
Q Consensus 261 ~~~~~l~s-~~~dg------~i~iwd-~~~~~~--~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d---~~~~~~~~~ 326 (437)
+|+.+++. +..++ .|.+|| ..++.. ...+.. ....... ++|+|||+.|+..+.+ +.
T Consensus 316 dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~------- 385 (723)
T 1xfd_A 316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS---GDWDVTKILAYDEKGNKIYFLSTEDLPRR------- 385 (723)
T ss_dssp TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC---SSSCEEEEEEEETTTTEEEEEESSSCTTC-------
T ss_pred CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec---CCeEEEeeeEEcCCCCEEEEEEcCCCCcc-------
Confidence 99966654 56677 577777 344431 333321 1222333 5899999988765444 34
Q ss_pred cccccccccchhhh--hhhhhcC---CCccccccCCCCCCccccc
Q psy4571 327 YWQGLVLFDILVCE--EQRQLLG---TEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 327 ~~~~i~~wd~~~~~--~~~~~~~---h~~~~~~~~~~~~~~~~~~ 366 (437)
+++|++.... ....+.+ |...+..+.++|+|+.++.
T Consensus 386 ----~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 386 ----RQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp ----CEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred ----eEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 6778775432 3344543 5566777889999876553
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=174.16 Aligned_cols=259 Identities=10% Similarity=0.081 Sum_probs=170.1
Q ss_pred EEecCceEEEEEeee------ccccccCCCcceEEeeCCCCCEEEEEECC-CcEEEEEcCCC-CCCCCeeeeccCCCCeE
Q psy4571 82 SCILNISILFFEIIF------TQNFPFPLSRQDVAWHLLHESLFGSVADD-QKLMIWDTRSH-NVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~------~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-g~v~vwd~~~~-~~~~~~~~~~~h~~~v~ 153 (437)
+...++.|.+|++.. .........+.+++|+| ++++|++++.+ +.|.+|++... .....+..+..+. .+.
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~ 87 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLT 87 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCS
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCc
Confidence 335688999998741 12234567899999999 57777777776 99999999721 1222334444433 788
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
+++|+|+++++++++..++.|.+||+..+. .....+. ....+.+++|+|+++++++++..++.|++||+.......
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~- 165 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV- 165 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE-
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee-
Confidence 999999999744555568999999994221 2233343 335688999999998655444489999999998622111
Q ss_pred CCCCCCCCCceEE--Eec-CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCCceeeeeeecc-----cCCcee
Q psy4571 232 TEDAEDGPPELLF--IHG-GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSDTKTMRLDSIR-----SNGGIS 301 (437)
Q Consensus 232 ~~~~~~~~~~~~~--~~~-~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~-----~~~~~~ 301 (437)
.+. ... .....+.+++|+|+++++++++..++.|.+||+.. ++........... ......
T Consensus 166 ----------~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 166 ----------AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp ----------EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred ----------eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 011 112 22347889999999996667777899999999964 3321111111111 112335
Q ss_pred eeecCCCCccc-ccCCCCcccccccccccccccccch----hhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 302 STASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDIL----VCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 302 ~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~----~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++|+|+|++++ ++..++. +.+||+. +.+.+..+..+.. +..+.++|+|..+..
T Consensus 236 i~~s~dg~~l~v~~~~~~~-----------i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASL-----------ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIA 293 (343)
T ss_dssp EEECTTSSEEEEEETTTTE-----------EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEE
T ss_pred eEECCCCCEEEEEecCCCE-----------EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEE
Confidence 79999998776 5556666 7888887 2334444555544 778889998875443
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=185.58 Aligned_cols=212 Identities=11% Similarity=0.110 Sum_probs=150.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-------CCCee-----eeccCCCCeEEEEEeCCCCcEEE----E
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-------SKPSH-----TVDAHTAEVNCLSFNPYSEYILA----T 167 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-------~~~~~-----~~~~h~~~v~~l~~~~~~~~~l~----s 167 (437)
..++.+++++ .+.++++++.+| +++|+...... ...+. ....+.+.|.+++|+|++.+ |+ +
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-lav~~~s 113 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLT-LSACMMS 113 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCE-EEEEEEE
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCE-EEEEEec
Confidence 4678999999 677888898888 88987542100 00111 11235678999999999996 66 7
Q ss_pred EeCCCeEEEEeCCCC-----c--e---eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 168 GSADKTVALWDLRNL-----K--L---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 168 gs~dg~i~lwd~~~~-----~--~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
|+.|+.|++||+++. + . ....+.+|...|.+++|+|++..+|++++.||+|++||+++..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---------- 183 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---------- 183 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE----------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc----------
Confidence 889999999998753 1 1 1345567999999999999854579999999999999998752
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec----ccCCceeeeecCCCCcccc
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI----RSNGGISSTASPTASSTAS 313 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~s~~g~~l~s 313 (437)
.+....+|...|.+++|+|+|+ +|++|+.||.|++||++ ++....+..... +...+..+.|++++.++++
T Consensus 184 ----~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 184 ----KVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ----EEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ----ceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 2334567889999999999999 78899999999999998 544444433211 1125667799998888754
Q ss_pred c-CCCCcccccccccccccccccchhh
Q psy4571 314 E-SPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 314 ~-s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
. ..++.+... ..+++||+...
T Consensus 258 ~~~~dg~~~~~-----~~v~i~~l~~~ 279 (434)
T 2oit_A 258 YAAADGTLETS-----PDVVMALLPKK 279 (434)
T ss_dssp EEETTCCSSSC-----CEEEEEECCCT
T ss_pred EccCCCccCCC-----CceEEEEeccC
Confidence 3 233322111 11677887654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-19 Score=167.21 Aligned_cols=217 Identities=10% Similarity=0.056 Sum_probs=145.1
Q ss_pred CCCcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc---------CCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA---------HTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~---------h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
...+..++|+| ++++|++++ .++.|.+|++........+..+.. +...+.+++|+|+|+ ++++...++
T Consensus 85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~ 162 (347)
T 3hfq_A 85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSD 162 (347)
T ss_dssp SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTT
T ss_pred CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCC
Confidence 45778999999 567666666 789999999964322233333321 123488999999999 788888899
Q ss_pred eEEEEeCC-CCcee-eeEecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 173 TVALWDLR-NLKLK-LHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 173 ~i~lwd~~-~~~~~-~~~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.|.+|++. +++.. ...+.. ....+..++|+|+|+++++++..++.|.+|++....... ..+......
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~----------~~~~~~~~~ 232 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF----------TQLGIVKTI 232 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE----------EEEEEEESS
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce----------EEeeeeeec
Confidence 99999998 33321 112222 233678899999999767777788999999987521110 111112221
Q ss_pred c------ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC-Ccccc
Q psy4571 250 T------AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-PTNSV 322 (437)
Q Consensus 250 ~------~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-~~~~~ 322 (437)
. ..+..++|+|+|+++++++..++.|.+|++........+.....+...+..++|+|||++|++++.+ +.
T Consensus 233 ~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~--- 309 (347)
T 3hfq_A 233 PADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN--- 309 (347)
T ss_dssp CTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE---
T ss_pred CCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc---
Confidence 1 4588999999999766788889999999997432222222222223446678999999988777644 55
Q ss_pred cccccccccccc--cchhhhhh
Q psy4571 323 HEKNYWQGLVLF--DILVCEEQ 342 (437)
Q Consensus 323 ~~~~~~~~i~~w--d~~~~~~~ 342 (437)
+.+| |..+|+..
T Consensus 310 --------v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 310 --------ATLYARDLTSGKLS 323 (347)
T ss_dssp --------EEEEEECTTTCCEE
T ss_pred --------EEEEEEeCCCCeEE
Confidence 6777 55566543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-19 Score=168.42 Aligned_cols=247 Identities=9% Similarity=0.020 Sum_probs=162.4
Q ss_pred EEEeeCCCcceEEEeec-cCceEeeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 39 RLCVAEPFDDAVEERVI-NEEYKIWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~-d~~v~iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.++|+ |+++.++.++. ++.+.+|+..++.+ ..... .......+++|+| ++
T Consensus 44 ~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------------------------~~~~~~~~~~~s~-dg 95 (331)
T 3u4y_A 44 DTAIT-SDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ--------------------------EGQSSMADVDITP-DD 95 (331)
T ss_dssp EEEEC-SSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--------------------------ECSSCCCCEEECT-TS
T ss_pred eEEEc-CCCCEEEEEeCCCCeEEEEECCCCceeEEecc--------------------------cCCCCccceEECC-CC
Confidence 66777 77764444433 66777777665543 11110 0112333499999 57
Q ss_pred CEEEEEECCC---cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe-EEEEeCCCCceee---eEe
Q psy4571 117 SLFGSVADDQ---KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT-VALWDLRNLKLKL---HSF 189 (437)
Q Consensus 117 ~~l~~~~~dg---~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~-i~lwd~~~~~~~~---~~~ 189 (437)
++++++..++ .|.+||+. ..+.+..+.. .....+++|+|+|+++++++..++. |.+|++....... ...
T Consensus 96 ~~l~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~ 171 (331)
T 3u4y_A 96 QFAVTVTGLNHPFNMQSYSFL---KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEF 171 (331)
T ss_dssp SEEEECCCSSSSCEEEEEETT---TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEecCCCCcccEEEEECC---CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcc
Confidence 7777555553 89999998 4455555544 4457999999999986677777788 9999998644311 112
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
.........++|+|+|+++++++..++.|++||+.+++.. ..+..+.. ...+..++|+|+|++++++.
T Consensus 172 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-----------~~~~~~~~-~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 172 ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-----------TLLNAVGT-NNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-----------EEEEEEEC-SSCCCCEEECTTSSEEEEEC
T ss_pred ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-----------ceeeeccC-CCCCceEEECCCCCEEEEEE
Confidence 2344568999999999976777778999999999876431 11233333 35678899999999666676
Q ss_pred eCCCeEEEEeCCCCCC--ceeeeee----ecccCCceeeeecCCCCcccccCC-CCcccccccccccccccccchhhh
Q psy4571 270 SEDNIMQEYCDSTDSD--TKTMRLD----SIRSNGGISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~--~~~~~~~----~~~~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
..++.|.+||+.+++. +..+... .........++|+|+|++++.++. ++. +.+||+....
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-----------v~v~d~~~~~ 306 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE-----------LKVFTISGKV 306 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE-----------EEEEETTSCE
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCc-----------EEEEEecCCc
Confidence 7788999999998865 2222211 111111233599999998765544 445 8899987644
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-20 Score=169.53 Aligned_cols=260 Identities=10% Similarity=0.029 Sum_probs=181.9
Q ss_pred ceEEEeeccCceEeeecCCCc-------------eeEEEecCCCCeE--EEecCceEEEEEeeeccc---cccCC-----
Q psy4571 48 DAVEERVINEEYKIWKKNTPF-------------LYDLVVNNYVANI--SCILNISILFFEIIFTQN---FPFPL----- 104 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~-------------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~~---~~~~~----- 104 (437)
+++++++.++.|++|+..++. +..+.+++.+..+ +...++.|.+||....+. +....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 467888889999999855432 4455566666544 333467899998654332 22322
Q ss_pred -CcceEEeeCCCCCEEEEEE------------CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 105 -SRQDVAWHLLHESLFGSVA------------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 105 -~v~~~~~sp~~~~~l~~~~------------~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
.+.+++|+| +++.++++. .++.|.+||+. ..+.+..+.. ...+.+++|+|++++ |+++ +
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~--~ 153 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFEA-PRQITMLAWARDGSK-LYGL--G 153 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEEC-CSSCCCEEECTTSSC-EEEE--S
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECC---CCcEEEEEeC-CCCcceeEECCCCCE-EEEe--C
Confidence 688999999 566777775 57999999998 3444445443 446788999999997 6666 6
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-----------------------eEEEEEcCCCCC
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----------------------RLHVWDLSKIGE 228 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-----------------------~i~vwd~~~~~~ 228 (437)
+.|.+||+.+++. ...+..+.. ...+.|+|++..+++++..++ .|.+||+.+++.
T Consensus 154 ~~i~~~d~~~~~~-~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 154 RDLHVMDPEAGTL-VEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp SSEEEEETTTTEE-EEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcE-eeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 8999999998664 444443331 112378999986554444444 468999987643
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
. ......+...+.+++|+|+++ .++++ ++.|++||+.+++....+.. ...+..++|+|+|
T Consensus 232 ~-------------~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg 291 (337)
T 1pby_B 232 A-------------MREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKNASIKRVPL----PHSYYSVNVSTDG 291 (337)
T ss_dssp E-------------EEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTTEEEEEEEC----SSCCCEEEECTTS
T ss_pred e-------------EeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCCcCcceecC----CCceeeEEECCCC
Confidence 2 122445566788999999999 45555 79999999998876665543 2456678999999
Q ss_pred CcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 309 SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 309 ~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+++++++.++. +++||+.+++.+..+..+
T Consensus 292 ~~l~~~~~~~~-----------i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 292 STVWLGGALGD-----------LAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CEEEEESBSSE-----------EEEEETTTCCEEEEEECG
T ss_pred CEEEEEcCCCc-----------EEEEECcCCcEEEEEEcC
Confidence 98888877776 899999999887777554
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-19 Score=184.01 Aligned_cols=272 Identities=13% Similarity=0.112 Sum_probs=187.9
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCce----------eEEEecCCCCeEEEecCceEEEEEeee-----ccc
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL----------YDLVVNNYVANISCILNISILFFEIIF-----TQN 99 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~----------~~~~~~~~~~~i~~~~~~~i~~~~~~~-----~~~ 99 (437)
..|.+++|+ |+ ..++.+ .|+.+++|+..++.+ ....|++++..+....++.|.+|++.. ++.
T Consensus 82 ~~v~~~~~s-pd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDA-GR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEET-TT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEEC-CC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCc
Confidence 568899999 88 555544 469999999765443 345678888888888899999999876 543
Q ss_pred ccc---CCC---------------cceEEeeCCCCCEEEEEE---------------------------------CCCcE
Q psy4571 100 FPF---PLS---------------RQDVAWHLLHESLFGSVA---------------------------------DDQKL 128 (437)
Q Consensus 100 ~~~---~~~---------------v~~~~~sp~~~~~l~~~~---------------------------------~dg~v 128 (437)
... ... +.+++|+| +++.|++++ .+..|
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 321 112 58999999 678888877 44679
Q ss_pred EEEEcCCCCCCCCeeee--ccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCceeeeEec-cCCC---ceE
Q psy4571 129 MIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLKLKLHSFE-SHKD---EIF 197 (437)
Q Consensus 129 ~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~~~~~~~~-~h~~---~v~ 197 (437)
++||+.++ +..... ..|...+.+++|+|+|+. |++++.++ .|.+||+.+++....... .+.. .+.
T Consensus 238 ~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 238 GIYHLATG---KTVYLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEETTTT---EEEECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred EEEECCCC---ceEeeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 99999843 222222 256678999999999996 77777665 899999998633222221 2222 246
Q ss_pred EEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE-EEEccCCCeEEEEEeCCC-
Q psy4571 198 QVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD-FSWNPNEPWVICSVSEDN- 273 (437)
Q Consensus 198 ~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~p~~~~~l~s~~~dg- 273 (437)
.++|+| +|+ ++++++.|+.+++|++.... ..+..+..|...+.. ++|+|+++.++++++.++
T Consensus 314 ~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~-------------~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 314 PLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTG-------------RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CCEECTTCSSE-EEEEECTTSSCEEEEEETTS-------------CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CceeecCCCCE-EEEEEccCCccEEEEEECCC-------------CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 789999 998 68889999999999876211 223445567777876 899999996666776665
Q ss_pred ---eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 274 ---IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 274 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
.|..||+.+++ ...+. +..+...++|||||++++....+.. .-..+++||..+++
T Consensus 380 ~~~~l~~~d~~~~~-~~~l~----~~~~~~~~~~spdg~~l~~~~~~~~-------~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGGK-TKDLT----PESGMHRTQLSPDGSAIIDIFQSPT-------VPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCCC-CEESC----CSSSEEEEEECTTSSEEEEEEECSS-------CSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCCC-ceecc----CCCceEEEEECCCCCEEEEEecCCC-------CCcEEEEEECCCCe
Confidence 77788887765 33332 3345667899999998876643321 00115667766554
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=189.88 Aligned_cols=295 Identities=13% Similarity=0.111 Sum_probs=193.6
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------------------------eeEEEecCCCCeEEEecC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------------------------LYDLVVNNYVANISCILN 86 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------------------------~~~~~~~~~~~~i~~~~~ 86 (437)
.+..+.|. ++.+++++.|+ | +||..++. +..+.++++ ..+.+..+
T Consensus 27 ~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~ 100 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ 100 (706)
T ss_dssp -CTTCEEE---TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET
T ss_pred cCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC
Confidence 34445565 56777777777 7 99965543 455677888 77777788
Q ss_pred ceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC--CCCCCeeeeccCCCC----------
Q psy4571 87 ISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH--NVSKPSHTVDAHTAE---------- 151 (437)
Q Consensus 87 ~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~h~~~---------- 151 (437)
+.+.+||+..++.. .....+.+++|+| +++.|+.+ .++.|++||+.+. ...+.......+...
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 99999997655432 2356789999999 67778775 5899999999840 002333333333332
Q ss_pred ----eEEEEEeCCCCcEEEEEe---------------------------------CCCeEEEEeCCCCceeeeEe--ccC
Q psy4571 152 ----VNCLSFNPYSEYILATGS---------------------------------ADKTVALWDLRNLKLKLHSF--ESH 192 (437)
Q Consensus 152 ----v~~l~~~~~~~~~l~sgs---------------------------------~dg~i~lwd~~~~~~~~~~~--~~h 192 (437)
+.+++|+|||++ |++++ .+..|.+||+.+++. .... ..|
T Consensus 179 e~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~ 256 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPK 256 (706)
T ss_dssp CTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCT
T ss_pred hcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCC
Confidence 488999999996 77776 457899999998653 2222 246
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCC-----eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---ccEEEEEEcc--CC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT---AKISDFSWNP--NE 262 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~p--~~ 262 (437)
...+.+++|+|+|+. |++++.|+ .|++||+.++..... +.. ..+. ..+.+++|+| +|
T Consensus 257 ~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~-----------~~~-~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 257 EKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRT-----------LFV-ETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp TCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEE-----------EEE-EECSSCCCCCSCCEECTTCSS
T ss_pred ceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeE-----------EEE-ccCCCeECccCCceeecCCCC
Confidence 678999999999995 66666565 899999987632111 111 1122 1246789999 99
Q ss_pred CeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+ ++++++.|+.+++|++. +++....+.. +...... ++|+|+|+.++.++.+..- ....+..||..+++
T Consensus 324 ~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~---~~~~v~~~~~~spdg~~l~~~~~~~~~------~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 324 Q-FIWQSRRDGWNHLYLYDTTGRLIRQVTK---GEWEVTNFAGFDPKGTRLYFESTEASP------LERHFYCIDIKGGK 393 (706)
T ss_dssp E-EEEEECTTSSCEEEEEETTSCEEEECCC---SSSCEEEEEEECTTSSEEEEEESSSCT------TCBEEEEEETTCCC
T ss_pred E-EEEEEccCCccEEEEEECCCCEEEecCC---CCeEEEeeeEEcCCCCEEEEEecCCCC------ceEEEEEEEcCCCC
Confidence 8 78888999999999886 4444444432 2223333 6899999877655433210 00116667777665
Q ss_pred hhhhhcCCCccccccCCCCCCcccc
Q psy4571 341 EQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 341 ~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
...+. |...+..+.++|+|..++
T Consensus 394 -~~~l~-~~~~~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 394 -TKDLT-PESGMHRTQLSPDGSAII 416 (706)
T ss_dssp -CEESC-CSSSEEEEEECTTSSEEE
T ss_pred -ceecc-CCCceEEEEECCCCCEEE
Confidence 33343 555677889999998654
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-19 Score=191.73 Aligned_cols=250 Identities=7% Similarity=-0.046 Sum_probs=179.6
Q ss_pred ecCceEEEEEeeec----cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-----------C
Q psy4571 84 ILNISILFFEIIFT----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-----------H 148 (437)
Q Consensus 84 ~~~~~i~~~~~~~~----~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-----------h 148 (437)
..++.+.+|.+... ..+.....+...+|+| ++..++.+ .++.|.+||+. . ..+..+.. |
T Consensus 221 ~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~Sp-DG~~la~~-~~~~i~~~d~~---~-~~l~~l~~~~~~~~~~~~~~ 294 (1045)
T 1k32_A 221 DIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNT-DGRRILFS-KGGSIYIFNPD---T-EKIEKIEIGDLESPEDRIIS 294 (1045)
T ss_dssp CTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEE-SSSCEEEE-ETTEEEEECTT---T-CCEEECCCCCCCBCCSEEEE
T ss_pred eccCceEEEEEeCCCCcceEecCCCCcceeeEcC-CCCEEEEE-eCCEEEEecCC---c-eEeeeeccCccccccccccc
Confidence 34567788875431 1222233567889999 56667666 48999999984 2 23334433 3
Q ss_pred CCCeEEEEEe-CCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC-ceEEEEEcCCCCcEEEEEeCCCeEE-EEEcCC
Q psy4571 149 TAEVNCLSFN-PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDRRLH-VWDLSK 225 (437)
Q Consensus 149 ~~~v~~l~~~-~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sg~~dg~i~-vwd~~~ 225 (437)
...+.+++|+ |+|+. |++++ ++.|.+|++..+. ...+..|.. .+..++|+ +|+. ++.++.++.+. +||+..
T Consensus 295 ~~~v~~~~~S~pdG~~-la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~-l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDL-IAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVA-FIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp CGGGGEEEEEECGGGC-EEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-SEEE-EEEEETTEEEEEEEETTT
T ss_pred ccccceeeecCCCCCE-EEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCe-EEEEECCCceEEEEECCC
Confidence 3468999999 99996 77776 8899999998754 344666777 89999999 9885 77777788888 899876
Q ss_pred CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec
Q psy4571 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s 305 (437)
+.. ..+.+|...+..++|+|+|+ .+++++.++.|++||+.+++....... +...+..++||
T Consensus 369 ~~~---------------~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~S 429 (1045)
T 1k32_A 369 GKA---------------EKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERS---REAMITDFTIS 429 (1045)
T ss_dssp CCE---------------EECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEEC---SSSCCCCEEEC
T ss_pred CCc---------------eEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccC---CCCCccceEEC
Confidence 432 22337778899999999999 788899999999999998876544432 34455678999
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
|||+++++++.++... ........+++||+.+++ ...+.+|...+..+.|+|+|..++.
T Consensus 430 pDG~~la~~~~~~~~~-~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGE-TDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp TTSCEEEEEEEECSST-TCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEE
T ss_pred CCCCeEEEEecCcccc-ccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEE
Confidence 9999998876543000 000111238999999887 6778888888888899999986543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-19 Score=189.69 Aligned_cols=258 Identities=13% Similarity=0.038 Sum_probs=190.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC--CC---------ceeEEEecCCCCeEEEecCceEEEEEeeecccccc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN--TP---------FLYDLVVNNYVANISCILNISILFFEIIFTQNFPF 102 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--~~---------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~ 102 (437)
...+.++.|+ ++ .++++++.|+.+++|... ++ ......+++++..+....++.|.+|+........+
T Consensus 203 ~~~v~~~~~s-~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l 280 (1045)
T 1k32_A 203 STHVSSPVIV-GH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKI 280 (1045)
T ss_dssp SSCCEEEEEE-TT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEEC
T ss_pred CCcccceEEe-CC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeee
Confidence 4457778888 66 677788889999999843 21 13345677888888777899999998632211111
Q ss_pred --------------CCCcceEEee-CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-CeEEEEEeCCCCcEEE
Q psy4571 103 --------------PLSRQDVAWH-LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-EVNCLSFNPYSEYILA 166 (437)
Q Consensus 103 --------------~~~v~~~~~s-p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~ 166 (437)
...+.+++|+ | ++..+++++ ++.|.+|++..+ ....+..|.. .+..++|+ +|+. |+
T Consensus 281 ~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~s-dg~~-l~ 352 (1045)
T 1k32_A 281 EIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGT----YVLKVPEPLRIRYVRRGGD-TKVA-FI 352 (1045)
T ss_dssp CCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSS----BEEECSCCSCEEEEEECSS-SEEE-EE
T ss_pred ccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCC----ceEEccCCCcceEEeeeEc-CCCe-EE
Confidence 2258999999 9 577777776 889999998732 2344567777 89999999 9986 88
Q ss_pred EEeCCCeEE-EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 167 TGSADKTVA-LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 167 sgs~dg~i~-lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.++.++.+. +||+.++. ...+..|...+..++|+|+|+. |++++.++.|++||+.+++. ...
T Consensus 353 ~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~tg~~--------------~~~ 415 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETGKP--------------TVI 415 (1045)
T ss_dssp EEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTCCE--------------EEE
T ss_pred EEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCE-EEEECCCCeEEEEECCCCce--------------EEe
Confidence 888888898 99998754 3344478889999999999985 88999999999999987642 233
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCC----------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSED----------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..+|...+.+++|+|||++ +++++.+ +.|++||+.+++ ...+.. +......++|+|||+.++.++
T Consensus 416 ~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~---~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 416 ERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT---ENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp EECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC---SSSBEEEEEECTTSCEEEEEE
T ss_pred ccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC---CCcccCCceEcCCCCEEEEEe
Confidence 4578888999999999994 5555543 499999999875 222221 334456678999999999888
Q ss_pred CCCccccc
Q psy4571 316 PTPTNSVH 323 (437)
Q Consensus 316 ~d~~~~~~ 323 (437)
.++....|
T Consensus 491 ~~~~~~~~ 498 (1045)
T 1k32_A 491 YRSLDPSP 498 (1045)
T ss_dssp SCCCCCEE
T ss_pred cccCCcCc
Confidence 76654444
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-19 Score=184.26 Aligned_cols=267 Identities=10% Similarity=0.033 Sum_probs=184.0
Q ss_pred CCceeEEEecCCCCeEEE-ec-Cc-----eEEEEEeeeccccc---c---C----------------------CCcceEE
Q psy4571 66 TPFLYDLVVNNYVANISC-IL-NI-----SILFFEIIFTQNFP---F---P----------------------LSRQDVA 110 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i~~-~~-~~-----~i~~~~~~~~~~~~---~---~----------------------~~v~~~~ 110 (437)
...+....|++++..+.. .. ++ .|.+||+..++... . . ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 355788899999987754 44 66 89999976543221 1 1 2378999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
||| +++.|++++. +.|++||+.++.. .....+..|...+.+++|+|||++ |+.++ ++.|.+||+.+++. .....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g~~-~~~~~ 189 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASGRQ-MQLTA 189 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTTEE-EECCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCCCE-EEecc
Confidence 999 6788888876 9999999984310 034456677888999999999996 77776 56999999998553 33333
Q ss_pred cCCCc----------------eEEEEEcCCCCcEEEEEeCCC---------------------------------eEEEE
Q psy4571 191 SHKDE----------------IFQVQWSPHNETILASSGTDR---------------------------------RLHVW 221 (437)
Q Consensus 191 ~h~~~----------------v~~v~~~p~~~~~l~sg~~dg---------------------------------~i~vw 221 (437)
.+... +..++|+|||++ |++++.|+ .|++|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 33322 478999999996 66666554 78888
Q ss_pred EcCC-CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeeeccc
Q psy4571 222 DLSK-IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDSIRS 296 (437)
Q Consensus 222 d~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~ 296 (437)
|+.+ +..... .....|...+..++| |||+.+++++. .+..|++||+.+++....+.......
T Consensus 269 d~~~~~~~~~~------------~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 269 SPAEQAQTQWI------------DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp CSSTTCCCEEE------------CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred ECCCCCceEEe------------cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 8876 542111 111257788999999 99995544433 36789999999987665544321000
Q ss_pred -CCceeeeecCCCCcccccCCCCcccccccccccccccccch-hhhhhhhhcCCCcccccc-CCCCCCccc
Q psy4571 297 -NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL-VCEEQRQLLGTEEESSDR-HSSDNDTED 364 (437)
Q Consensus 297 -~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~-~~~~~~~~~~h~~~~~~~-~~~~~~~~~ 364 (437)
.....++|+|||+++++++.++. .++|.+. .++ ...+.+|...+..+ .++|+|..+
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~-----------~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGF-----------QHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSS-----------CEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred CCcCCceEECCCCeEEEEecCCCc-----------cEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 02346799999998888888876 4555443 344 67777777667666 589998754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-20 Score=188.55 Aligned_cols=276 Identities=9% Similarity=-0.027 Sum_probs=178.2
Q ss_pred ceeEEEecCCCCeEEEecCceEEEEEeeeccccc---cCC----CcceEEeeCCCCCEEEEEECC---------CcEEEE
Q psy4571 68 FLYDLVVNNYVANISCILNISILFFEIIFTQNFP---FPL----SRQDVAWHLLHESLFGSVADD---------QKLMIW 131 (437)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~---~~~----~v~~~~~sp~~~~~l~~~~~d---------g~v~vw 131 (437)
....+.|++++..+....++.|++||...++... ... .+.+++||| ++++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEE
Confidence 3566678888877766788999999987654322 111 489999999 68888888764 788899
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce---------------
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI--------------- 196 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v--------------- 196 (437)
|+.++.. ..+....+|...+..++|+|||+. |+.++. +.|++||+.+++. ......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~-la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQ-LIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTC-EEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCE-EEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEec
Confidence 9985432 223333345556889999999996 787775 7999999998654 43333333333
Q ss_pred ---EEEEEcCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 197 ---FQVQWSPHNETILASSGTDR----------------------------------RLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 197 ---~~v~~~p~~~~~l~sg~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
.+++|+|||+. |++++.|+ .|++||+.++.....+...
T Consensus 173 ~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~---- 247 (723)
T 1xfd_A 173 KTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP---- 247 (723)
T ss_dssp SSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC----
T ss_pred cCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC----
Confidence 78999999996 66665442 7888888776532211000
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeeecccCCc----eeeeecCCCCcc
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDSIRSNGG----ISSTASPTASST 311 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~s~~g~~l 311 (437)
.....+...+..++|+|||+ ++++.+ .+..|++||+.+++....+.... .... ...+|+|||+.+
T Consensus 248 ----~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 248 ----DDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCTKKHEDES--EAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp ----CCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC--SSCCCCCCCCCEECTTSCSE
T ss_pred ----ccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc--CCEEeccCCCceEcCCCCeE
Confidence 00112366899999999999 554543 34689999999987655443211 1111 267999999988
Q ss_pred ccc--CCCCcccccccccccccccccc-hhhhh--hhhhcC-CCccccccCCCCCCcccc
Q psy4571 312 ASE--SPTPTNSVHEKNYWQGLVLFDI-LVCEE--QRQLLG-TEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 312 ~s~--s~d~~~~~~~~~~~~~i~~wd~-~~~~~--~~~~~~-h~~~~~~~~~~~~~~~~~ 365 (437)
+.. ..++.. .....+.+||. ..++. ...+.. +.+....+.++|+|..++
T Consensus 321 ~~~~~~~~~~~-----~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 321 FFIRAIPQGGR-----GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp EEEEEECCSSS-----SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred EEEEecccCCC-----cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence 754 334310 01122677883 44441 556654 333333357899988654
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-18 Score=158.39 Aligned_cols=187 Identities=10% Similarity=0.013 Sum_probs=140.3
Q ss_pred cceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 106 RQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
+.+++|+|+ ++.+++++ .++.|.+||+. ..+....+..+...+.+++|+|++++ +++++.++.|.+||+.+++
T Consensus 143 ~~~~~~s~d-g~~l~~~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 143 PRELVADDA-TNTVYISGIGKESVIWVVDGG---NIKLKTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEEETT-TTEEEEEEESSSCEEEEEETT---TTEEEEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTE
T ss_pred CceEEECCC-CCEEEEEecCCCceEEEEcCC---CCceEEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCe
Confidence 678999995 55555544 57899999998 45556666545666889999999996 8888889999999999866
Q ss_pred eeeeEecc----CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 184 LKLHSFES----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 184 ~~~~~~~~----h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
. ...+.. +...+..++|+|++++++++...++.|.+||+.+++.... ..... ...++|+
T Consensus 218 ~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--------------~~~~~--~~~~~~s 280 (353)
T 3vgz_A 218 I-LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK--------------VAAPE--SLAVLFN 280 (353)
T ss_dssp E-EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE--------------EECSS--CCCEEEE
T ss_pred E-EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE--------------EEcCC--CceEEEC
Confidence 5 444432 4556889999999997666666679999999987643222 22222 2568999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
|++++++++...++.|.+||..+++....+.. ...+..++|+|+|++++.+..++
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT----PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTTEEEEEEEC----CSEEEEEEECTTSCEEEEEEECC
T ss_pred CCCCEEEEEECCCCeEEEEECCCCeEEEEEec----CCCCCeEEEcCCCCEEEEEEccc
Confidence 99997777777899999999999877666653 23566789999999776665443
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.4e-19 Score=177.30 Aligned_cols=249 Identities=11% Similarity=-0.010 Sum_probs=175.5
Q ss_pred cceeEEEEeeCCCcceEEEeec-cCceEeeecCCC-----------ceeEEEecCCCCeEE-Eec---CceEEEEEeee-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVI-NEEYKIWKKNTP-----------FLYDLVVNNYVANIS-CIL---NISILFFEIIF- 96 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~-d~~v~iw~~~~~-----------~~~~~~~~~~~~~i~-~~~---~~~i~~~~~~~- 96 (437)
...|++++|+ |+++.|+.++. |++++||+..++ .+....|+++ ..+. +.. +....+|.+..
T Consensus 21 ~~~~~~~~~~-~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGV-VDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEE-ETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecC-CCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 4468899999 99999999887 999999995443 3445556655 3332 222 34566765543
Q ss_pred -cc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-
Q psy4571 97 -TQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD- 171 (437)
Q Consensus 97 -~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d- 171 (437)
.. ...........+|+|++...+++.+.++.+.+||+.++ +..... .+.. .+++|+|||+. |++++.+
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g---~~~~l~-~~~~--~~~~~spDG~~-la~~~~~~ 171 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG---GLRELA-RLPG--FGFVSDIRGDL-IAGLGFFG 171 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT---EEEEEE-EESS--CEEEEEEETTE-EEEEEEEE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC---cEEEee-cCCC--ceEEECCCCCE-EEEEEEcC
Confidence 11 22223356678999966665555555666679999843 333222 2333 78999999996 8877776
Q ss_pred ---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 ---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 ---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.|.+||+.+++ ...+..|.+.+..++|+|||+. |++++.++ .|++||+.+++.. ..
T Consensus 172 ~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~~~~~---------------~~ 233 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVE---------------DL 233 (582)
T ss_dssp TTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCE-EEEEECSSCEEEEEECTTTCCEE---------------EC
T ss_pred CCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCE-EEEccCCCeeEEEEEcCCCCcEE---------------Ec
Confidence 789999999865 4467788899999999999995 77888888 8999999876432 34
Q ss_pred cCccccEEEEE--------EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 247 GGHTAKISDFS--------WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 247 ~~h~~~v~~l~--------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.+|...+..++ |+|||. ++++++.|+.+++|++ ++.... ....+..++|+ +|+++++++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~~~~~------~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GERVEA------PQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TEEECC------CSSEEEEEEEE-TTEEEEEEEETT
T ss_pred cCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CCeecc------CCCceEEEEec-CCEEEEEEcCCC
Confidence 55655555566 999995 8999999999999999 543321 12344567889 999888877654
Q ss_pred c
Q psy4571 319 T 319 (437)
Q Consensus 319 ~ 319 (437)
.
T Consensus 304 ~ 304 (582)
T 3o4h_A 304 T 304 (582)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-18 Score=160.65 Aligned_cols=214 Identities=6% Similarity=0.019 Sum_probs=134.6
Q ss_pred CcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc-----------CCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA-----------HTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~-----------h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
....+++ +++++++++ .++.|.+|++........+..... +...+.+++|+|+|+++++++..++
T Consensus 101 ~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 101 DPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp CEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT
T ss_pred CcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC
Confidence 4455666 345555554 688999999974332222211111 1234688999999997566666689
Q ss_pred eEEEEeCCCCce------e------eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 173 TVALWDLRNLKL------K------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 173 ~i~lwd~~~~~~------~------~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.|.+|++..... . ......+...+..++|+|+|+++++++..++.|.+||+.++.....
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~--------- 248 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI--------- 248 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE---------
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe---------
Confidence 999998875431 1 1112234556789999999996555555799999999985422110
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeC-CCeEEEEeCC--CCCCceeeeeeecccCCceeeeecCCCCcccccC-C
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSE-DNIMQEYCDS--TDSDTKTMRLDSIRSNGGISSTASPTASSTASES-P 316 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~ 316 (437)
..+.....+......++|+|+|++++++... ++.|.+|++. +++. ..+..... ...+..++|+|+|++|++++ .
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~-~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL-TKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE-EEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE-EEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 1111123334557899999999965566666 6899999996 3432 22221111 34566789999999887776 4
Q ss_pred CCccccccccccccccc--ccchhhhhhh
Q psy4571 317 TPTNSVHEKNYWQGLVL--FDILVCEEQR 343 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~--wd~~~~~~~~ 343 (437)
++. +.+ +|..+|+...
T Consensus 327 ~~~-----------v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 327 TNV-----------IQIFERDQATGLLTD 344 (361)
T ss_dssp TTE-----------EEEEEECTTTCCEEE
T ss_pred CCC-----------EEEEEEECCCCcEee
Confidence 455 566 4666676543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-18 Score=161.16 Aligned_cols=255 Identities=8% Similarity=0.009 Sum_probs=171.5
Q ss_pred EeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEE
Q psy4571 41 CVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 41 ~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 120 (437)
++. +.+.++++++.++.|++||..++.+......+. ...+..++|+|++..+++
T Consensus 6 ~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------------~~~~~~~~~s~dg~~~~v 59 (349)
T 1jmx_B 6 ALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-------------------------KFGPGTAMMAPDNRTAYV 59 (349)
T ss_dssp CCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSS-------------------------CCSSCEEEECTTSSEEEE
T ss_pred ccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-------------------------CCCCceeEECCCCCEEEE
Confidence 455 778889999999999999988776554322111 014568999995433556
Q ss_pred EEECCCcEEEEEcCCCCCCCCeeeeccCC------CCeEEEEEeCCCCcEEEEEeCC------------CeEEEEeCCCC
Q psy4571 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHT------AEVNCLSFNPYSEYILATGSAD------------KTVALWDLRNL 182 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~~~~~~~~~~~h~------~~v~~l~~~~~~~~~l~sgs~d------------g~i~lwd~~~~ 182 (437)
++..++.|.+||+.+ .+.+..+..+. ..+.+++|+|+|++ +++++.+ +.|.+||+.++
T Consensus 60 ~~~~~~~i~~~d~~t---~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 60 LNNHYGDIYGIDLDT---CKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EETTTTEEEEEETTT---TEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EeCCCCcEEEEeCCC---CcEEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCc
Confidence 666789999999983 44444443222 23788999999996 7776654 89999999874
Q ss_pred ce--eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC-----------------CCCce-
Q psy4571 183 KL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED-----------------GPPEL- 242 (437)
Q Consensus 183 ~~--~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-----------------~~~~~- 242 (437)
+. .+.... +...+.+++|+|+|+ +++ ++ +.|.+||+.+++.......... .+...
T Consensus 136 ~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
T 1jmx_B 136 LEAKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 210 (349)
T ss_dssp GGBCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred cccceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeE
Confidence 32 122333 445688999999998 555 43 3499999988764433221110 00000
Q ss_pred ------------------------------------EEEecCccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 243 ------------------------------------LFIHGGHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 243 ------------------------------------~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
......+...+.+++|+| +++ .++++ ++.|.+||+.+++.
T Consensus 211 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 211 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRKL 287 (349)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTEE
T ss_pred EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCeE
Confidence 000111223567889999 999 55555 88999999999876
Q ss_pred ceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 286 TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
...+.. ...+..++|+|+|+.+++++.++. +++||..+++.+..+...
T Consensus 288 ~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~-----------v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 288 IKAANL----DHTYYCVAFDKKGDKLYLGGTFND-----------LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEEC----SSCCCEEEECSSSSCEEEESBSSE-----------EEEEETTTTEEEEEEECS
T ss_pred EEEEcC----CCCccceEECCCCCEEEEecCCCe-----------EEEEeccccceeeeeecC
Confidence 666543 234667899999998888777766 899999998877766443
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=163.42 Aligned_cols=237 Identities=11% Similarity=0.102 Sum_probs=156.2
Q ss_pred CCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLR 180 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~ 180 (437)
..+..++|+| ++++++++.. ++.|.+|++..+ ..+.+..+..+...+..++|+|+|++ |++++ .++.|.+|++.
T Consensus 40 ~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a~spdg~~-l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 40 QNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVAVDEARQL-VYSANYHKGTAEVMKIA 116 (347)
T ss_dssp SCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEEEETTTTE-EEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcc-CCeEEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEEECCCCCE-EEEEeCCCCEEEEEEeC
Confidence 4567899999 4555544432 689999999633 22344454556778899999999996 66655 78999999996
Q ss_pred CCce--eeeEecc---------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-
Q psy4571 181 NLKL--KLHSFES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG- 248 (437)
Q Consensus 181 ~~~~--~~~~~~~---------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (437)
.... .+..+.. +...+.+++|+|+|+ +++++..++.|++|++...... ..+.....
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~-----------~~~~~~~~~ 184 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQL-----------SEQSVLTME 184 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCE-----------EEEEEEECC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcE-----------EEeeeEEcC
Confidence 3222 1222211 122488999999999 7888888999999999832211 11111122
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCCceeeeeeeccc-----CCceeeeecCCCCccc-ccCCCCcc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSDTKTMRLDSIRS-----NGGISSTASPTASSTA-SESPTPTN 320 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~-----~~~~~~~~s~~g~~l~-s~s~d~~~ 320 (437)
....+..++|+|+|+++++++..++.+.+|++.. ++............ ..+..++|+|||++++ +...++.
T Consensus 185 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~- 263 (347)
T 3hfq_A 185 AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT- 263 (347)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-
T ss_pred CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-
Confidence 2235788999999997777778899999999875 33211111111111 2355679999999774 4445565
Q ss_pred cccccccccccccccchh-h--hhhhhhcCCCccccccCCCCCCccccc
Q psy4571 321 SVHEKNYWQGLVLFDILV-C--EEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~-~--~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.+||+.. | +.+..+..+...+..+.++|+|..+..
T Consensus 264 ----------v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v 302 (347)
T 3hfq_A 264 ----------LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVV 302 (347)
T ss_dssp ----------EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEE
T ss_pred ----------EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEE
Confidence 78888863 2 334455555556778889999975543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=178.54 Aligned_cols=292 Identities=10% Similarity=0.052 Sum_probs=184.6
Q ss_pred EEEeeCCCcceEEEeeccCceEeeecCCCc--------------eeEEEecCCCCeEEEec----------CceEEEEEe
Q psy4571 39 RLCVAEPFDDAVEERVINEEYKIWKKNTPF--------------LYDLVVNNYVANISCIL----------NISILFFEI 94 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--------------~~~~~~~~~~~~i~~~~----------~~~i~~~~~ 94 (437)
.++|+ |++.+++++ .|+++++|+..++. +....+++++..+.... ++.|.+||+
T Consensus 20 ~~~~s-~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWI-SGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEES-SSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEEC-CCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 56888 888665554 69999999976543 45677888888875443 489999998
Q ss_pred eeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCe-----------------E
Q psy4571 95 IFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEV-----------------N 153 (437)
Q Consensus 95 ~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v-----------------~ 153 (437)
..++. ......+..++||| +++.|+.+. ++.|++||+.++ +..... .++...| .
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g---~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGD---PPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTS---CCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccceecCcccccceECC-CCCEEEEEE-CCeEEEEeCCCC---CcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 77766 55667799999999 577777775 789999999843 222211 2222222 4
Q ss_pred EEEEeCCCCcEEEEEeCCC----------------------------------eEEEEeCCCCcee----e---eEeccC
Q psy4571 154 CLSFNPYSEYILATGSADK----------------------------------TVALWDLRNLKLK----L---HSFESH 192 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg----------------------------------~i~lwd~~~~~~~----~---~~~~~h 192 (437)
+++|+|||++ |++++.|. .|++||+.+++.. + ..+.+|
T Consensus 173 ~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 173 ALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred cEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 8999999996 77776542 7899999885431 1 123457
Q ss_pred CCceEEEEEcCCCCcEEEEEeC--C--CeEEEEE----cCCCCCCCCCCCCCCCCCceEEEecCccccEE-----EEEEc
Q psy4571 193 KDEIFQVQWSPHNETILASSGT--D--RRLHVWD----LSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS-----DFSWN 259 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~--d--g~i~vwd----~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~l~~~ 259 (437)
...+..++|+||++ ++++... + ..|.+|| +.+++...... ....+|...+. .+.|+
T Consensus 252 ~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 252 DYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE----------HIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp CEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE----------EEEECSSSCSSSSSCCCCEEC
T ss_pred cceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe----------cccccCCceEccccCCccEEC
Confidence 88899999999976 5666432 2 2488899 66554322200 00135555555 78999
Q ss_pred cCCCeEEE-EEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC-----Cccccccccccccc
Q psy4571 260 PNEPWVIC-SVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-----PTNSVHEKNYWQGL 331 (437)
Q Consensus 260 p~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-----~~~~~~~~~~~~~i 331 (437)
|+|+.+++ +...+| .|.+||+.+++ ...+.. ....+....++ +++.++..+.+ +. .
T Consensus 321 pdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~---~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~-----------~ 384 (719)
T 1z68_A 321 YDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS---GKWEAINIFRV-TQDSLFYSSNEFEEYPGR-----------R 384 (719)
T ss_dssp TTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC---SSSCEEEEEEE-CSSEEEEEESCGGGCTTC-----------B
T ss_pred CCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc---CceEEEEEEEE-eCCEEEEEEecCCCCCce-----------E
Confidence 99995554 344555 57777887765 233221 12223344555 66666555443 44 5
Q ss_pred ccccchh--hh-hhhh----hcCCCccccccCCCCCCcccc
Q psy4571 332 VLFDILV--CE-EQRQ----LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 332 ~~wd~~~--~~-~~~~----~~~h~~~~~~~~~~~~~~~~~ 365 (437)
++|.+.. +. .... +.+|...+....+++++..++
T Consensus 385 ~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~ 425 (719)
T 1z68_A 385 NIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYA 425 (719)
T ss_dssp EEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEE
T ss_pred EEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEE
Confidence 6666543 31 1122 233555555667777776544
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-16 Score=150.49 Aligned_cols=211 Identities=11% Similarity=0.092 Sum_probs=133.6
Q ss_pred cceEEeeCCCCC--EEEEEE-------------CCCcEEEEEcCCCCCCCCeeeec----cCCCCeEEEEEeCCCCcEEE
Q psy4571 106 RQDVAWHLLHES--LFGSVA-------------DDQKLMIWDTRSHNVSKPSHTVD----AHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 106 v~~~~~sp~~~~--~l~~~~-------------~dg~v~vwd~~~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~ 166 (437)
+.+++|+| +++ +++++. .+|.+.+|++... ++....+. .+...+.+++|+|+|++ ++
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~ 160 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET--GKLEKNVQNYEYQENTGIHGMVFDPTETY-LY 160 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT--CCEEEEEEEEECCTTCCEEEEEECTTSSE-EE
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCC--CcCcceEeeEEeCCCCcceEEEECCCCCE-EE
Confidence 56789999 455 344442 6899999999732 22222222 24567999999999996 55
Q ss_pred EEe-CCCeEEEEeCC-CCcee-eeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC--CCCCCCCCCCCCCC
Q psy4571 167 TGS-ADKTVALWDLR-NLKLK-LHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK--IGEEQSTEDAEDGP 239 (437)
Q Consensus 167 sgs-~dg~i~lwd~~-~~~~~-~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~~~~~~ 239 (437)
++. .++.|.+||++ +++.. +..+. .|...+..++|+|+|++++++...++.|.+|++.. +......
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~------- 233 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH------- 233 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE-------
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEcc-------
Confidence 554 47899999998 55432 22232 24567899999999996444444578999998763 2211000
Q ss_pred CceEEEe----cCccc------cEEEEE-EccCCCeEEEEEeCCC-----eEEEEeCC-CCCCceeeeeeecccCCceee
Q psy4571 240 PELLFIH----GGHTA------KISDFS-WNPNEPWVICSVSEDN-----IMQEYCDS-TDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 240 ~~~~~~~----~~h~~------~v~~l~-~~p~~~~~l~s~~~dg-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 302 (437)
..+..+ .+|.. .+..++ |+|+|++++++...++ .|.+|++. +++..............+..+
T Consensus 234 -~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 312 (365)
T 1jof_A 234 -HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN 312 (365)
T ss_dssp -EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC
T ss_pred -ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc
Confidence 001111 12332 588999 9999995554443333 89999996 454322111111123456678
Q ss_pred eecC---CCCcccccCCC-Ccccccccccccccccccchhh
Q psy4571 303 TASP---TASSTASESPT-PTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 303 ~~s~---~g~~l~s~s~d-~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+++| ||++|+++..+ +. +++|++...
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~-----------v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGW-----------LEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCE-----------EEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCe-----------EEEEEEchh
Confidence 9999 89999888764 56 677777654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-17 Score=152.71 Aligned_cols=242 Identities=10% Similarity=0.052 Sum_probs=153.8
Q ss_pred CCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
..+..++|+| ++++|++++.+ +.|.+|++... ...+.+.....+......+++ ++++++++...++.|.+|+
T Consensus 50 ~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 50 ANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp SCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 4567899999 57778888775 79999998742 122334444445567788888 7886555555789999999
Q ss_pred CCCCcee--eeEe---c--------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC----C-CCCCCCCCCCC
Q psy4571 179 LRNLKLK--LHSF---E--------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE----E-QSTEDAEDGPP 240 (437)
Q Consensus 179 ~~~~~~~--~~~~---~--------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~----~-~~~~~~~~~~~ 240 (437)
+...... .... . .+...+.+++|+|+|+++++++..++.|.+|++..... . .... .
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~------~ 200 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK------G 200 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE------E
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec------c
Confidence 9754321 1111 1 11234688999999997666666789999999876432 0 0000 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce--eeeeeecccCCceeeeecCCCCcccccCC--
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK--TMRLDSIRSNGGISSTASPTASSTASESP-- 316 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~s~s~-- 316 (437)
........+...+..++|+|+|+++++++..++.|.+||+.+++... .+.....+......++|+|||++|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 00011223345678999999999555555579999999998764322 22211112233457799999998865544
Q ss_pred CCcccccccccccccccccch--hhh--hhhhhcCCCccccccCCCCCCccccc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDIL--VCE--EQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~--~~~--~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++. +.+|++. +|+ .+..+.. ...+..+.++|+|+.+..
T Consensus 281 ~~~-----------i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 281 ADG-----------VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp SCE-----------EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEE
T ss_pred CCE-----------EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEE
Confidence 355 7888874 444 2333333 345677889999975443
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-18 Score=173.12 Aligned_cols=263 Identities=13% Similarity=0.087 Sum_probs=166.0
Q ss_pred EEEecCCCCeEEEecCceEEEEEeeeccccccC-------CCcceEEeeCCCCCEEEEEEC---------CCcEEEEEcC
Q psy4571 71 DLVVNNYVANISCILNISILFFEIIFTQNFPFP-------LSRQDVAWHLLHESLFGSVAD---------DQKLMIWDTR 134 (437)
Q Consensus 71 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-------~~v~~~~~sp~~~~~l~~~~~---------dg~v~vwd~~ 134 (437)
+..|++++..+....++.|++||...++..... ..+.+++||| ++++|+.++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECC
Confidence 556777776666667899999998765543221 2489999999 6788887776 6899999998
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce-----------------E
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI-----------------F 197 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v-----------------~ 197 (437)
++..... ..+ ...+..++|||||+. |+.+. ++.|++||+.+++.......++...| .
T Consensus 99 ~g~~~~~-~~l---~~~~~~~~~SPDG~~-la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 99 NGEFVRG-NEL---PRPIQYLCWSPVGSK-LAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTEECCS-SCC---CSSBCCEEECSSTTC-EEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCccccc-eec---CcccccceECCCCCE-EEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 5422000 112 246889999999997 77765 78999999988654221222333322 4
Q ss_pred EEEEcCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 198 QVQWSPHNETILASSGTDR----------------------------------RLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+++|+|||+. |++++.|. .|++||+.++....... . ..-
T Consensus 173 ~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~---~---~~~ 245 (719)
T 1z68_A 173 ALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE---V---PVP 245 (719)
T ss_dssp CEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE---C---CCC
T ss_pred cEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeE---c---cCC
Confidence 8999999995 67666442 78899988754310000 0 000
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCC----CeEEEEe----CCCCCCceeeee-eecccCCce-----eeeecCCCC
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSED----NIMQEYC----DSTDSDTKTMRL-DSIRSNGGI-----SSTASPTAS 309 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~-~~~~~~~~~-----~~~~s~~g~ 309 (437)
..+.+|...+..++|+||++ ++++.... ..|.+|| +.+++....+.. ...+..... ...|+|||+
T Consensus 246 ~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 246 AMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp HHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred ccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC
Confidence 11346788899999999976 66664322 3488899 877766554420 011122222 568999999
Q ss_pred cccc--cCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 310 STAS--ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 310 ~l~s--~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
.++. ...++. ..+.+||+.+++ ...+..+...+....+.
T Consensus 325 ~l~~~~~~~~g~---------~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~ 365 (719)
T 1z68_A 325 SYYKIFSDKDGY---------KHIHYIKDTVEN-AIQITSGKWEAINIFRV 365 (719)
T ss_dssp CEEEEEECTTSC---------EEEEEESSCSTT-CEECSCSSSCEEEEEEE
T ss_pred eEEEEEEccCCc---------eEEEEEECCCCc-eEecccCceEEEEEEEE
Confidence 6654 334442 227788887766 45555554444443333
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=164.17 Aligned_cols=253 Identities=14% Similarity=0.031 Sum_probs=171.9
Q ss_pred CceeEEEecCCCCeEEE-ec-CceEEEEEeeeccccc---cC-CCcceEEeeCCCCCEEEEEEC---CCcEEEEEcCCCC
Q psy4571 67 PFLYDLVVNNYVANISC-IL-NISILFFEIIFTQNFP---FP-LSRQDVAWHLLHESLFGSVAD---DQKLMIWDTRSHN 137 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~-~~-~~~i~~~~~~~~~~~~---~~-~~v~~~~~sp~~~~~l~~~~~---dg~v~vwd~~~~~ 137 (437)
..++.+.+++++..++. .. +++++||++..++... +. ..+..++|+| + .++++++. +...++|.+....
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccC
Confidence 45788888888887754 33 8899999975443322 23 3688999999 4 67777765 4556776665311
Q ss_pred CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--
Q psy4571 138 VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-- 215 (437)
Q Consensus 138 ~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-- 215 (437)
..... .+... ..+...+|+|+++.++++++.++.+.+||+.+++. ..+..+.. .+++|+|||+. +++++.|
T Consensus 100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~--~~l~~~~~--~~~~~spDG~~-la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL--RELARLPG--FGFVSDIRGDL-IAGLGFFGG 172 (582)
T ss_dssp TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--EEEEEESS--CEEEEEEETTE-EEEEEEEET
T ss_pred CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--EEeecCCC--ceEEECCCCCE-EEEEEEcCC
Confidence 11222 33222 23556789999876555555555666999988653 33333333 88999999995 7766666
Q ss_pred --CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeee
Q psy4571 216 --RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 216 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~ 291 (437)
+.|++||+.+++. ..+..|...+..++|+|||+ .|+++..++ .|++||+.+++.. .+..
T Consensus 173 ~~~~i~~~d~~~g~~---------------~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~~~-~~~~ 235 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGL---------------RVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGSVE-DLEL 235 (582)
T ss_dssp TEEEEEEEETTTCCC---------------EEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred CCeEEEEEcCCCCCc---------------eEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence 7799999987542 23567888899999999999 566888888 8999999988655 2221
Q ss_pred eecccCCceeee--------ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 292 DSIRSNGGISST--------ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 292 ~~~~~~~~~~~~--------~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
+...+...+ |+|||.++++++.++. +++|++ |+.... ....+..+.++ ++..
T Consensus 236 ---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-----------~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 236 ---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-----------SAVFID--GERVEA---PQGNHGRVVLW-RGKL 295 (582)
T ss_dssp ---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-----------EEEEET--TEEECC---CSSEEEEEEEE-TTEE
T ss_pred ---CCcChhhhhhccccceeEcCCCcEEEEEEcCCc-----------EEEEEE--CCeecc---CCCceEEEEec-CCEE
Confidence 222333446 9999988888988887 788888 655442 23446666777 6665
Q ss_pred cc
Q psy4571 364 DL 365 (437)
Q Consensus 364 ~~ 365 (437)
+.
T Consensus 296 l~ 297 (582)
T 3o4h_A 296 VT 297 (582)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.3e-16 Score=142.79 Aligned_cols=227 Identities=11% Similarity=0.035 Sum_probs=160.0
Q ss_pred eeEEEEeeCCCcce-EEEeeccCceEeeecCCCcee----------------EEEecCCCCeEEEe-------------c
Q psy4571 36 RFYRLCVAEPFDDA-VEERVINEEYKIWKKNTPFLY----------------DLVVNNYVANISCI-------------L 85 (437)
Q Consensus 36 ~v~~~~~~~~~~~~-l~tgs~d~~v~iw~~~~~~~~----------------~~~~~~~~~~i~~~-------------~ 85 (437)
.+..++|+ |+++. +++++.++.|.+|+..++... .+.+++++..+.+. .
T Consensus 35 ~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 36778999 88865 466677889999997654433 34455666666444 4
Q ss_pred CceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC--CCeEEEEEeCC
Q psy4571 86 NISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT--AEVNCLSFNPY 160 (437)
Q Consensus 86 ~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~--~~v~~l~~~~~ 160 (437)
++.|.+||....+ .+.....+.+++|+| ++++++++ ++.|.+||+.+ .+....+..+. .+ +.|+|+
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~---~~~~~~~~~~~~~~~---~~~s~d 184 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWAR-DGSKLYGL--GRDLHVMDPEA---GTLVEDKPIQSWEAE---TYAQPD 184 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECT-TSSCEEEE--SSSEEEEETTT---TEEEEEECSTTTTTT---TBCCCB
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECC-CCCEEEEe--CCeEEEEECCC---CcEeeeeeccccCCC---ceeCCC
Confidence 6899999975433 233456788999999 56656666 68999999983 44444444333 33 378999
Q ss_pred CCcEEEEEeCCC-----------------------eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 161 SEYILATGSADK-----------------------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 161 ~~~~l~sgs~dg-----------------------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
+..+++++..++ .|.+||+++++.....+..+...+.+++|+|++++ ++++ ++.
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~ 261 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNV 261 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE-EEEe--CCe
Confidence 987444443443 46899999876543445566778899999999985 5555 789
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|.+||+.+++. +..+.. ...+.+++|+|+|+ .+++++.++.|++||+.+++.+..+..
T Consensus 262 v~~~d~~~~~~--------------~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 262 LESFDLEKNAS--------------IKRVPL-PHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEETTTTEE--------------EEEEEC-SSCCCEEEECTTSC-EEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcC--------------cceecC-CCceeeEEECCCCC-EEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 99999987532 222322 23578899999999 555678899999999999987777664
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-16 Score=148.02 Aligned_cols=273 Identities=11% Similarity=0.019 Sum_probs=166.0
Q ss_pred EEeeCCCcceEEEeec-cCc--eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 40 LCVAEPFDDAVEERVI-NEE--YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~-d~~--v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.+|+ |+++.|+..+. ++. +.+|+..++....+... ....+..++|+| ++
T Consensus 41 ~~~S-pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~--------------------------~~~~~~~~~~sp-dg 92 (388)
T 3pe7_A 41 KCFT-RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG--------------------------RGDNTFGGFLSP-DD 92 (388)
T ss_dssp CCBC-TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS--------------------------SCBCSSSCEECT-TS
T ss_pred ccCC-CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC--------------------------CCCCccceEEcC-CC
Confidence 6778 88888888776 554 55556655554432110 011233578999 67
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE--EeCCCCcEEEEE----------------------eCCC
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYSEYILATG----------------------SADK 172 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~--~~~~~~~~l~sg----------------------s~dg 172 (437)
..|+.++.++.|++||+.+ .+.......+...+.... ++|++.. ++.. ..+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLAT---LEENVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp SEEEEEETTTEEEEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CEEEEEeCCCeEEEEECCC---CcceeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcc
Confidence 8888999899999999984 344444445555554444 4899985 5532 2457
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCC------CeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.|.+||+.+++ ...+..+...+..++|+| +|+. ++..+.+ ..|.++|+...... .
T Consensus 169 ~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~---------------~ 230 (388)
T 3pe7_A 169 RLMRVDLKTGE--STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNMR---------------K 230 (388)
T ss_dssp EEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCCE---------------E
T ss_pred eEEEEECCCCc--eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCceE---------------E
Confidence 89999999865 444555677899999999 9985 5554433 36888887654321 1
Q ss_pred ecCcc--ccEEEEEEccCCCeEEEEEeCCC----eEEEEeCCCCCCceeeeeeeccc--CCceeeeecCCCCcccccCCC
Q psy4571 246 HGGHT--AKISDFSWNPNEPWVICSVSEDN----IMQEYCDSTDSDTKTMRLDSIRS--NGGISSTASPTASSTASESPT 317 (437)
Q Consensus 246 ~~~h~--~~v~~l~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~~l~s~s~d 317 (437)
+..+. ..+..++|+|+|+.+++.+..++ .|++||+.+++............ .......|+|||+.++....+
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 22233 35788999999996544443322 39999999986533222211000 001223799999988865322
Q ss_pred CcccccccccccccccccchhhhhhhhhcCCCc-----------cccccCCCCCCcccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE-----------ESSDRHSSDNDTEDL 365 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~-----------~~~~~~~~~~~~~~~ 365 (437)
+.. +.......|.+||+.+++. ..+..+.. .+....++|+|+.++
T Consensus 311 ~~~--~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 311 DSG--YKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp --------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred ccc--cccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence 100 0000112289999988765 45655554 467778999997554
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-15 Score=141.81 Aligned_cols=268 Identities=10% Similarity=0.060 Sum_probs=179.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc-----cCCCcce
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP-----FPLSRQD 108 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-----~~~~v~~ 108 (437)
.-.+..++++ |+++++++.+.++.++++.......+..... ....++.|.+||...++... .-..+..
T Consensus 23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGL------GPIEEDTILVIDPNNAEILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGG------CSCCSCCEEEECTTTCCEEEEECTTTCSSEEE
T ss_pred cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeeccccc------ccccCCcEEEEECCCCeEEeccCCCccCCceE
Confidence 3458889999 9999999999887766665544333321100 11145566777654322211 1236789
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee---------ccCCCCeEEEEEeC-CCCcEEEEEe-CCCeEEEE
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---------DAHTAEVNCLSFNP-YSEYILATGS-ADKTVALW 177 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~~l~sgs-~dg~i~lw 177 (437)
++++| +++++++...++.|++||.... ...+..+ .++......++++| ++. ++++.+ .++.|++|
T Consensus 96 ia~d~-~g~l~v~d~~~~~v~~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~ 171 (329)
T 3fvz_A 96 LSIDT-DGNYWVTDVALHQVFKLDPHSK--EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQF 171 (329)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECTTCS--SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEE
T ss_pred EEECC-CCCEEEEECCCCEEEEEeCCCC--eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEE
Confidence 99999 5778888888999999998632 1134444 34455789999999 565 677776 69999999
Q ss_pred eCCCCceeeeEecc----------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 178 DLRNLKLKLHSFES----------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 178 d~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
|.. +.. +..+.. +-.....++++|++..++++...++.|++||..+++.... ....
T Consensus 172 ~~~-g~~-~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~------------~~~~ 237 (329)
T 3fvz_A 172 SPS-GKF-VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE------------IKHA 237 (329)
T ss_dssp CTT-SCE-EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE------------ECCT
T ss_pred cCC-CCE-EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE------------Eecc
Confidence 954 343 444432 2234789999999445788888899999999985543222 1113
Q ss_pred CccccEEEEEEcc------CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 248 GHTAKISDFSWNP------NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 248 ~h~~~v~~l~~~p------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.+...+.+++|+| +|. +.++...+..|++||..+++.+..+.....+...+..++++|+|.++++...++.
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~-- 314 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT-- 314 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC--
T ss_pred ccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE--
Confidence 4556788999999 332 2222334568999999999877765422234455677899999988888888777
Q ss_pred ccccccccccccccchh
Q psy4571 322 VHEKNYWQGLVLFDILV 338 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~ 338 (437)
|++|++..
T Consensus 315 ---------I~~~~~~~ 322 (329)
T 3fvz_A 315 ---------VWKFTLTE 322 (329)
T ss_dssp ---------EEEEEEEE
T ss_pred ---------EEEEeCCc
Confidence 77777653
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-17 Score=151.88 Aligned_cols=223 Identities=9% Similarity=-0.029 Sum_probs=153.9
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.+++++ ++.++++++.++.|.+||+. ..+.+..+..+. ..+..++|+|+++.+++++..++.|.+||+.+++. .
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~ 78 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVA---SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-T 78 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETT---TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-E
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECC---CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-E
Confidence 456777 67889999999999999998 445555554333 25788999999987566777899999999998664 4
Q ss_pred eEecc-C-----CCceEEEEEcCCCCcEEEEEeCC------------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 187 HSFES-H-----KDEIFQVQWSPHNETILASSGTD------------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 187 ~~~~~-h-----~~~v~~v~~~p~~~~~l~sg~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
..+.. + ...+..++|+|+|++ +++++.+ +.|.+||+.++..... +.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-----------~~~~~~ 146 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-----------VRTFPM 146 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-----------SEEEEC
T ss_pred EEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccce-----------eeeccC
Confidence 44432 2 223788999999996 5666544 8999999987543221 122222
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec----------------------------------
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---------------------------------- 294 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------- 294 (437)
...+.+++|+|+|+ +++ ++ +.|++||+.+++....+.....
T Consensus 147 -~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 147 -PRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp -CSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred -CCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 33578899999999 665 33 3499999998876655432210
Q ss_pred -------------------------------ccCCceeeeecC-CCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 295 -------------------------------RSNGGISSTASP-TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 295 -------------------------------~~~~~~~~~~s~-~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.......++++| +|++++++ ++. +.+||+.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-----------v~~~d~~~~~~~ 288 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-----------LAKYDLKQRKLI 288 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-----------EEEEETTTTEEE
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-----------EEEEECccCeEE
Confidence 000122346678 88888777 444 899999999887
Q ss_pred hhhcCCCccccccCCCCCCccccc
Q psy4571 343 RQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
..+.... .+..+.++|+|..+..
T Consensus 289 ~~~~~~~-~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 289 KAANLDH-TYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EEEECSS-CCCEEEECSSSSCEEE
T ss_pred EEEcCCC-CccceEECCCCCEEEE
Confidence 7765433 3667889999876554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-16 Score=158.23 Aligned_cols=253 Identities=12% Similarity=0.062 Sum_probs=161.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.+++.|. |++.+++++ |++|++|+..++....+....... .+.....+++||| ++
T Consensus 19 ~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~Sp-dg 73 (740)
T 4a5s_A 19 LYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD---------------------EFGHSINDYSISP-DG 73 (740)
T ss_dssp CCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT---------------------TCCSCCCEEEECT-TS
T ss_pred ccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhh---------------------hhcccccceEECC-CC
Confidence 4578999 999888886 999999999888765442211110 1112334689999 67
Q ss_pred CEEEEEECC---------CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 117 SLFGSVADD---------QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 117 ~~l~~~~~d---------g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
+.++.++.+ +.+.+||+.+++ ...+..|.+.+...+|||||+. ||.+ .|+.|.+||+.++.....
T Consensus 74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----~~~l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 74 QFILLEYNYVKQWRHSYTASYDIYDLNKRQ----LITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTE----ECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCEEC
T ss_pred CEEEEEECCeeeEEEccceEEEEEECCCCc----EEEcccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceEEE
Confidence 888888775 567799998542 3345567788999999999997 7766 478999999988654222
Q ss_pred EeccCCCce-----------------EEEEEcCCCCcEEEEEeCC-C---------------------------------
Q psy4571 188 SFESHKDEI-----------------FQVQWSPHNETILASSGTD-R--------------------------------- 216 (437)
Q Consensus 188 ~~~~h~~~v-----------------~~v~~~p~~~~~l~sg~~d-g--------------------------------- 216 (437)
+..++...+ ..+.|+|||+. |+.++.| +
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 233333323 34899999996 6655432 2
Q ss_pred --eEEEEEcCC---CCCCCCCCCCCCCCCceEEEec------CccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCC
Q psy4571 217 --RLHVWDLSK---IGEEQSTEDAEDGPPELLFIHG------GHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDS 281 (437)
Q Consensus 217 --~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~ 281 (437)
.|++||+.+ +... . ...+. +|...+..++|+|||+ +++... .+..|.+||+.
T Consensus 227 ~~~l~v~d~~~~~~~~~~-----------~-~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNA-----------T-SIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEEEEEETTSCCSSSCC-----------C-EEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEE
T ss_pred eeEEEEEECCCCCCCCcc-----------e-EEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECC
Confidence 355555554 3110 1 11122 3777899999999998 444432 23479999999
Q ss_pred CCC----Cceeeee-eecccCC-----ceeeeecCCCCccc-ccC-CCCcccccccccccccccccchhhhhhh
Q psy4571 282 TDS----DTKTMRL-DSIRSNG-----GISSTASPTASSTA-SES-PTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 282 ~~~----~~~~~~~-~~~~~~~-----~~~~~~s~~g~~l~-s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
+++ +...... ...+... ....+|+|||+.++ ..+ .++. ..|.+||..+++...
T Consensus 294 tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~---------~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 294 ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGY---------RHICYFQIDKKDCTF 358 (740)
T ss_dssp TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSC---------EEEEEEETTCSSCEE
T ss_pred CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCc---------eEEEEEECCCCceEe
Confidence 987 2222111 0111111 22568999999766 444 3332 337888887665443
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-14 Score=130.14 Aligned_cols=244 Identities=13% Similarity=0.129 Sum_probs=165.5
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
..+..++++ +++.++++.+.++.|.+|+..+..+.... ... ........+.++++.+.
T Consensus 30 ~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~--~~~-------------------~~~~~~~~p~~i~~~~~ 87 (286)
T 1q7f_A 30 TEPSGVAVN-AQNDIIVADTNNHRIQIFDKEGRFKFQFG--ECG-------------------KRDSQLLYPNRVAVVRN 87 (286)
T ss_dssp SCEEEEEEC-TTCCEEEEEGGGTEEEEECTTSCEEEEEC--CBS-------------------SSTTCBSSEEEEEEETT
T ss_pred CCCceEEEC-CCCCEEEEECCCCEEEEECCCCcEEEEec--ccC-------------------CCcccccCceEEEEEcC
Confidence 457788888 88888888888999999997644332211 000 00011234678889543
Q ss_pred CCCEEEEEEC-CCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec--
Q psy4571 115 HESLFGSVAD-DQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-- 190 (437)
Q Consensus 115 ~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-- 190 (437)
++.++++... ++.|.+||.. .+.+..+. .+...+.+++++|+|. ++++...++.|.+||... +. ...+.
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~----g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~-~~~~~~~ 160 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQY----GQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-NV-LHKFGCS 160 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTT----SCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CE-EEEEECT
T ss_pred CCeEEEEcCCCCCEEEEECCC----CcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-CE-EEEeCCC
Confidence 5666655533 7899999943 34444443 3445789999999997 688878889999999764 33 44442
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEEEEccCCCeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+...+..++++|+|+ ++++...++.|++||.... .+..+. ++...+..++++|+|. ++++
T Consensus 161 ~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---------------~~~~~~~~g~~~~p~~i~~d~~G~-l~v~ 223 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---------------YLRQIGGEGITNYPIGVGINSNGE-ILIA 223 (286)
T ss_dssp TTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---------------EEEEESCTTTSCSEEEEEECTTCC-EEEE
T ss_pred CccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---------------EEEEEccCCccCCCcEEEECCCCC-EEEE
Confidence 3445689999999997 6888788999999997542 122232 2335789999999998 7878
Q ss_pred EeCCC-eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 269 VSEDN-IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 269 ~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
...++ .|.+||.. ++.+..+.... ....+..++++|+|+++++. .++. |++|+...
T Consensus 224 ~~~~~~~i~~~~~~-g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs~-~~~~-----------v~v~~~~~ 280 (286)
T 1q7f_A 224 DNHNNFNLTIFTQD-GQLISALESKV-KHAQCFDVALMDDGSVVLAS-KDYR-----------LYIYRYVQ 280 (286)
T ss_dssp ECSSSCEEEEECTT-SCEEEEEEESS-CCSCEEEEEEETTTEEEEEE-TTTE-----------EEEEECSC
T ss_pred eCCCCEEEEEECCC-CCEEEEEcccC-CCCcceeEEECCCCcEEEEC-CCCe-----------EEEEEccc
Confidence 87776 99999954 55555554321 12235567999999988774 4666 67776643
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-16 Score=146.68 Aligned_cols=239 Identities=9% Similarity=-0.007 Sum_probs=147.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcC-CCCCCCCeeee--ccCCCCeEEEEEeCCCCcE-EEEEe-----------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTR-SHNVSKPSHTV--DAHTAEVNCLSFNPYSEYI-LATGS----------- 169 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~-l~sgs----------- 169 (437)
.+..++|+| ++++|++++.+ .|.+|++. ++ +..... ..+ +.+.+++|+|+|+++ ++++.
T Consensus 41 ~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g---~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 41 PISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPT---EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCSEEEECT-TSSEEEEEEBT-EEEEEEEEETT---EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCcEEEECC-CCCEEEEEccc-eEEEEEECCCC---CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 577899999 67788888877 99999986 32 222211 111 235668999999852 44543
Q ss_pred --CCCeEEEEeCCCCceeeeEec----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC-CCCCCCCCCCCCCCCCce
Q psy4571 170 --ADKTVALWDLRNLKLKLHSFE----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS-KIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 170 --~dg~i~lwd~~~~~~~~~~~~----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~ 242 (437)
.+|.+.+|++.........+. .+...+.+++|+|+|++++++...++.|++||+. +++. ..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------------~~ 182 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------------EL 182 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------------EE
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------------EE
Confidence 689999999974222222222 2456799999999998644444457899999997 4432 11
Q ss_pred EEEec--CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC--CCCCce---eeeeeecc---cC-------Cceeee-e
Q psy4571 243 LFIHG--GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS--TDSDTK---TMRLDSIR---SN-------GGISST-A 304 (437)
Q Consensus 243 ~~~~~--~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~~~---~~~~~~~~---~~-------~~~~~~-~ 304 (437)
+.... .|...+..++|+|+|++++++...++.|.+|++. +++... .+...... +. ....++ |
T Consensus 183 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 183 VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 12222 2456789999999999555555568899999875 454321 12111100 11 255678 9
Q ss_pred cCCCCcccccCCCCcccccccccccccccccch-hhhhhh---hhcCCCccccccCCCC---CCccccc
Q psy4571 305 SPTASSTASESPTPTNSVHEKNYWQGLVLFDIL-VCEEQR---QLLGTEEESSDRHSSD---NDTEDLN 366 (437)
Q Consensus 305 s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~-~~~~~~---~~~~h~~~~~~~~~~~---~~~~~~~ 366 (437)
+|||++|+++..+... .....+.+|++. +|+... .+..+......+.++| +|..++.
T Consensus 263 spdG~~l~v~~~~~~~-----~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v 326 (365)
T 1jof_A 263 TFSGKYMFASSRANKF-----ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAI 326 (365)
T ss_dssp CTTSSEEEEEEEESST-----TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEE
T ss_pred CCCCCEEEEECCCCCC-----CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEE
Confidence 9999988765432210 000017889885 565432 1333444566777888 6765543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=157.49 Aligned_cols=238 Identities=14% Similarity=0.166 Sum_probs=152.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC-----eEEEEEeCCCCcEEEEEeCC-------
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE-----VNCLSFNPYSEYILATGSAD------- 171 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~sgs~d------- 171 (437)
.....++|+| ++.+++++ ||.|++||+.+ .+....+.+|... ...++|||||++ |+.++.+
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEY---GNSSVFLENSTFDEFGHSINDYSISPDGQF-ILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTT---CCEEEEECTTTTTTCCSCCCEEEECTTSSE-EEEEEEEEECSSSC
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCC---CceEEEEechhhhhhcccccceEECCCCCE-EEEEECCeeeEEEc
Confidence 3466899999 56777775 99999999984 4445556666532 244889999996 7777765
Q ss_pred --CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 172 --KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 172 --g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
+.+.+||+.+++ ...+..|...+...+|||||+. ||.+. |+.|++||+.++...+.... +... ..+.++
T Consensus 90 ~~~~~~~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~-la~~~-~~~i~~~~~~~~~~~~lt~~---g~~~--~~~~g~ 160 (740)
T 4a5s_A 90 YTASYDIYDLNKRQ--LITEERIPNNTQWVTWSPVGHK-LAYVW-NNDIYVKIEPNLPSYRITWT---GKED--IIYNGI 160 (740)
T ss_dssp EEEEEEEEETTTTE--ECCSSCCCTTEEEEEECSSTTC-EEEEE-TTEEEEESSTTSCCEECCSC---CBTT--TEEESB
T ss_pred cceEEEEEECCCCc--EEEcccCCCcceeeEECCCCCE-EEEEE-CCeEEEEECCCCceEEEcCC---CCcc--ceecCc
Confidence 567799999865 3456677888999999999996 66664 78999999987654322100 0000 011222
Q ss_pred cc---------cEEEEEEccCCCeEEEEEeCC-C-----------------------------------eEEEEeCCC--
Q psy4571 250 TA---------KISDFSWNPNEPWVICSVSED-N-----------------------------------IMQEYCDST-- 282 (437)
Q Consensus 250 ~~---------~v~~l~~~p~~~~~l~s~~~d-g-----------------------------------~i~iwd~~~-- 282 (437)
.. ....+.|||||+ .|+.++.| + .|++||+.+
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred ccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 21 123589999999 45555322 1 588889888
Q ss_pred -CCCceeeeeee-----cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh------hhhhh--cCC
Q psy4571 283 -DSDTKTMRLDS-----IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE------EQRQL--LGT 348 (437)
Q Consensus 283 -~~~~~~~~~~~-----~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~------~~~~~--~~h 348 (437)
++......+.. .+......++|||||+.++....... ....|.+||+.+|+ .+..+ .+|
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~-------~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ-------NYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST-------TEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC-------CEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 64322222211 12233456699999996654322110 11228999999987 23333 455
Q ss_pred Ccccc-----ccCCCCCCcccc
Q psy4571 349 EEESS-----DRHSSDNDTEDL 365 (437)
Q Consensus 349 ~~~~~-----~~~~~~~~~~~~ 365 (437)
...+. ...|+|||+.++
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEE
T ss_pred CceEccCcCCCceEcCCCCEEE
Confidence 54443 567899998654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-14 Score=133.64 Aligned_cols=230 Identities=13% Similarity=0.075 Sum_probs=163.2
Q ss_pred CCcceEEeeCCCCCEEEEEECC------------------------CcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVADD------------------------QKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFN 158 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~d------------------------g~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~ 158 (437)
..+.+++++| +++++++...+ +.|.+||..+ .+.+..+. ++...+..++++
T Consensus 24 ~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECTTTCSSEEEEEEC
T ss_pred CCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCCCccCCceEEEEC
Confidence 4678899999 57777777666 4799999873 44444443 344578999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---------ccCCCceEEEEEcC-CCCcEEEEEe-CCCeEEEEEcCCCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSF---------ESHKDEIFQVQWSP-HNETILASSG-TDRRLHVWDLSKIG 227 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---------~~h~~~v~~v~~~p-~~~~~l~sg~-~dg~i~vwd~~~~~ 227 (437)
|+|. ++++...++.|++||.......+..+ ..+......++++| ++. ++++.+ .++.|++||.. +.
T Consensus 100 ~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 100 TDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPS-GK 176 (329)
T ss_dssp TTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTT-SC
T ss_pred CCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCC-CC
Confidence 9999 68888889999999987542234444 23445689999999 665 677776 68999999943 32
Q ss_pred CCCCCCCCCCCCCceEEEec----------CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 228 EEQSTEDAEDGPPELLFIHG----------GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
. +..+. ++-.....|+++|++..++++...++.|++||..+++.+..+.... ...
T Consensus 177 ~--------------~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~ 241 (329)
T 3fvz_A 177 F--------------VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGR 241 (329)
T ss_dssp E--------------EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTT
T ss_pred E--------------EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCC
Confidence 2 22221 2234489999999955488888999999999999887776664322 233
Q ss_pred CceeeeecC------CCCcccccCCCCcccccccccccccccccchhhhhhhhh---cCCCccccccCCCCCCccccc
Q psy4571 298 GGISSTASP------TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL---LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 298 ~~~~~~~s~------~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~---~~h~~~~~~~~~~~~~~~~~~ 366 (437)
....++++| +|...++...+.. +++||..+|+.+..+ .++......++++++|..+..
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~-----------v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQ-----------GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCC-----------EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcE-----------EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEE
Confidence 455667788 5554444444444 889999999888776 466667888899999864443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-14 Score=133.47 Aligned_cols=271 Identities=8% Similarity=-0.048 Sum_probs=177.8
Q ss_pred ccCceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc---cccc-------CC
Q psy4571 55 INEEYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ---NFPF-------PL 104 (437)
Q Consensus 55 ~d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~---~~~~-------~~ 104 (437)
.|+.+.+||..++.+. .+.++++...+.... ++.|.+||....+ .++. ..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 4667777775543322 566777777664432 4678999864322 2222 24
Q ss_pred CcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
....++|+| ++++|+++.. ++.|.+||+. ..+.+.. +. ..+ ...+.+.|++...+++.+.||.+.+|+...
T Consensus 109 ~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~---~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 109 YDGLFRQTT-DGKFIVLQNASPATSIGIVDVA---KGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CGGGEEECT-TSSEEEEEEESSSEEEEEEETT---TTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CcceEEECC-CCCEEEEECCCCCCeEEEEECC---CCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 578899999 5677776653 6899999998 4455555 43 222 233667888755689999999999999875
Q ss_pred Cceeee------EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--C----c
Q psy4571 182 LKLKLH------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--G----H 249 (437)
Q Consensus 182 ~~~~~~------~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~----h 249 (437)
...... .+.....++ .+.++|++.. ++..+.++.|.++|+....... +..+. . +
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~v~v~d~~~~~~~~------------~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKDK-AHFVSYYGNVYSADFSGDEVKV------------DGPWSLLNDEDKA 248 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSSE-EEEEBTTSEEEEEECSSSSCEE------------EEEEESCCHHHHH
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCCE-EEEEeCCCeEEEEEecCCCcee------------cccccccCccccc
Confidence 332121 122222222 3344677765 5566788999999997543210 01000 0 0
Q ss_pred ----cccEEEEEEccCCCeEEEEEeC----------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 250 ----TAKISDFSWNPNEPWVICSVSE----------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 250 ----~~~v~~l~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
......++|+|+++.++++.+. .+.|.+||+.+++.+..+... . +..++++|||++|+++.
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~----~-p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR----D-ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT----T-CCEEEEETTTTEEEEEC
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC----C-eeEEEECCCCCEEEEeC
Confidence 0111127899998866666541 358999999999887777642 2 77889999999998877
Q ss_pred CCCcccccccccccccccccchhh--hhhhhhcCCCccccccCCCCCCc
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVC--EEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~--~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
. +. +.+||..++ +.+..+.++......+.++|+|.
T Consensus 324 ~-~~-----------v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 324 G-GN-----------VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp S-SC-----------EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C-Ce-----------EEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 5 55 899999999 98888766666677888898885
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6e-14 Score=130.09 Aligned_cols=262 Identities=8% Similarity=-0.036 Sum_probs=165.0
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
|.+++|+ +....++..+.++.++.|.. ....... .....+.+++|+| ++
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------~~~~~~~~~~~~~-~g 56 (333)
T 2dg1_A 8 LPTLFYS-GKSNSAVPIISESELQTITA---EPWLEIS--------------------------KKGLQLEGLNFDR-QG 56 (333)
T ss_dssp CCBCCSC-GGGGCSSCCCCGGGSCEEEC---EEEEEEE--------------------------SSCCCEEEEEECT-TS
T ss_pred cceeeec-CCccceeEEeecccCccccc---ceeEEEe--------------------------ccCccccCcEECC-CC
Confidence 4556677 66666766677777887732 1111100 0112456899998 56
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----CeEEEEeCCCCceeeeEec--
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KTVALWDLRNLKLKLHSFE-- 190 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~i~lwd~~~~~~~~~~~~-- 190 (437)
.+++++..++.|.+||..+ .+.......+...+.+++++|+|. ++++...+ +.|.+||.++... ...+.
T Consensus 57 ~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 131 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPET---KEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNL-QDIIEDL 131 (333)
T ss_dssp CEEEEETTTCEEEEECTTT---CCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSC-EEEECSS
T ss_pred CEEEEECCCCEEEEEeCCC---CcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEE-EEEEccC
Confidence 7877888899999999873 333333334567899999999997 57766666 6899999987553 21222
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeC------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGT------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
.+...+.+++++|+|+ ++++... .+.|..+|..+... ..+..+...+..++|+|+++.
T Consensus 132 ~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 132 STAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTV---------------TPIIQNISVANGIALSTDEKV 195 (333)
T ss_dssp SSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCE---------------EEEEEEESSEEEEEECTTSSE
T ss_pred ccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEE---------------EEeecCCCcccceEECCCCCE
Confidence 2445789999999997 5665543 24565665543221 111222345788999999986
Q ss_pred EEEEEeCCCeEEEEeCCC-CCCceeee----eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 265 VICSVSEDNIMQEYCDST-DSDTKTMR----LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~-~~~~~~~~----~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
++++.+.++.|.+||+.+ +.....+. ........+..++++++|.++++...++. |.+||. .+
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-----------v~~~d~-~g 263 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-----------VLVFNK-RG 263 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-----------EEEECT-TS
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-----------EEEECC-CC
Confidence 666777789999999974 33332221 00001123455788999998877765555 677776 45
Q ss_pred hhhhhhcCCC------ccccccCCCCCCc
Q psy4571 340 EEQRQLLGTE------EESSDRHSSDNDT 362 (437)
Q Consensus 340 ~~~~~~~~h~------~~~~~~~~~~~~~ 362 (437)
+.+..+..+. ..+..+.+++++.
T Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 264 YPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp CEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred CEEEEEEcCCCccccccCcceEEECCCCC
Confidence 5555543332 2466777777764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.59 E-value=6.6e-14 Score=142.41 Aligned_cols=230 Identities=9% Similarity=-0.061 Sum_probs=145.9
Q ss_pred ceeEEEEeeCCCcceEEEe--eccCceEeeec-CCC----------cee---------EEEec--CCCCe-EEEecCc--
Q psy4571 35 YRFYRLCVAEPFDDAVEER--VINEEYKIWKK-NTP----------FLY---------DLVVN--NYVAN-ISCILNI-- 87 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tg--s~d~~v~iw~~-~~~----------~~~---------~~~~~--~~~~~-i~~~~~~-- 87 (437)
..+..++|+ ++.-.+++. +.++..+||.. .++ .+. ...+. |++.. +....+.
T Consensus 24 ~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 24 GRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp SCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred CccceeEEc-CCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 356677888 666666666 44677888872 111 112 23343 67777 7666554
Q ss_pred eEEEEEee--e-ccccc--------cCCCcceEEeeCCCCCEEEEEECC----------CcEEEEEcCCCC--CCCCeee
Q psy4571 88 SILFFEII--F-TQNFP--------FPLSRQDVAWHLLHESLFGSVADD----------QKLMIWDTRSHN--VSKPSHT 144 (437)
Q Consensus 88 ~i~~~~~~--~-~~~~~--------~~~~v~~~~~sp~~~~~l~~~~~d----------g~v~vwd~~~~~--~~~~~~~ 144 (437)
.|.+++.. . +.... +...+.+++|+| +++.|+.++.+ ..|++||+.+.. .......
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 44444543 1 22111 123567899999 67778777766 589999998410 0012334
Q ss_pred ec-cCCCCeEEEEEeCCCCcEEEEEeCC--------CeEEEEeCC-CCc--eeeeEeccCCCceEEEEEcCCCCcEEEEE
Q psy4571 145 VD-AHTAEVNCLSFNPYSEYILATGSAD--------KTVALWDLR-NLK--LKLHSFESHKDEIFQVQWSPHNETILASS 212 (437)
Q Consensus 145 ~~-~h~~~v~~l~~~~~~~~~l~sgs~d--------g~i~lwd~~-~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 212 (437)
+. .+...+..++|+|||++ |+.++.+ ..|.+||+. ++. ........|...+..++|+|+|+ +++++
T Consensus 182 l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 182 LSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp SSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred EEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 44 55567888999999996 6666544 479999998 441 32333445578899999999999 78888
Q ss_pred eCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc--------EEEEEEccCCCeEEEEEeCCCeEEEE--eC
Q psy4571 213 GTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK--------ISDFSWNPNEPWVICSVSEDNIMQEY--CD 280 (437)
Q Consensus 213 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------v~~l~~~p~~~~~l~s~~~dg~i~iw--d~ 280 (437)
+.++ .|.+||+.+++.... ...+... +..++|+|++. ++++++. +.+++| |+
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l--------------~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQL--------------CRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEES--------------SCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEET
T ss_pred CCCCCeEEEEEECCCCceeec--------------ccccccccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEEEC
Confidence 8888 566666644432111 1111111 45688999998 7888888 999999 55
Q ss_pred CCCC
Q psy4571 281 STDS 284 (437)
Q Consensus 281 ~~~~ 284 (437)
.+++
T Consensus 324 ~~~~ 327 (662)
T 3azo_A 324 ESGE 327 (662)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 5543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.8e-13 Score=136.08 Aligned_cols=231 Identities=10% Similarity=-0.023 Sum_probs=144.4
Q ss_pred eeEEEEeeCCCcceEEEeeccC-----ceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVINE-----EYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~-----~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.+..++|+ |++++|+.++.++ .|++|+..++....... ....+..++
T Consensus 126 ~~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~---------------------------~~~~~~~~~ 177 (710)
T 2xdw_A 126 ALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL---------------------------ERVKFSCMA 177 (710)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---------------------------EEECSCCEE
T ss_pred EEEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---------------------------cCcccceEE
Confidence 45566666 7777666554433 56666666555433211 011256899
Q ss_pred eeCCCCCEEEEEECCCc----------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeC---
Q psy4571 111 WHLLHESLFGSVADDQK----------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSA--- 170 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~----------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~--- 170 (437)
|+| +++.|+.++.++. |++|++.++... ..+.....|...+..+.|+|||+++++++..
T Consensus 178 wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 178 WTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp ECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 999 5777777777765 999999754211 1222223355668899999999974444432
Q ss_pred -CCeEEEEeCCC------CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 171 -DKTVALWDLRN------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 171 -dg~i~lwd~~~------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
+..|.+||+.+ +......+..+...+.. .|+|+|+.+++.+..+ +.|.+||+.+....
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----------- 324 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES----------- 324 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-----------
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------
Confidence 56899999986 43235556666666655 4889998755555443 36999998775311
Q ss_pred ceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCe--EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 241 ELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNI--MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 241 ~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
....+..|.. .+..++|++++. ++++...|+. |.+||+.+++....+.. +...+..++++|++..++
T Consensus 325 -~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 325 -KWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp -GCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEE
T ss_pred -cceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEE
Confidence 0112333333 688899986665 8888888885 56677767765555543 233344567888887655
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=136.90 Aligned_cols=228 Identities=11% Similarity=0.055 Sum_probs=139.3
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEE-------------------EEEeCCCCcEEEEE
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC-------------------LSFNPYSEYILATG 168 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~sg 168 (437)
.+.|+| +++.|+.++.++.|++||+.+ .+.......+...... +.|+|+++. ++.+
T Consensus 85 ~~~~sp-dg~~l~~~~~~~~l~~~d~~~---~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~ 159 (396)
T 3c5m_A 85 GGFIST-DERAFFYVKNELNLMKVDLET---LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFA 159 (396)
T ss_dssp TCEECT-TSSEEEEEETTTEEEEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHH
T ss_pred cceECC-CCCEEEEEEcCCcEEEEECCC---CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcc-eeee
Confidence 478999 678888888899999999984 3333333333332222 356777775 4433
Q ss_pred -----eCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCC------CeEEEEEcCCCCCCCCCCCCC
Q psy4571 169 -----SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTD------RRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 169 -----s~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~ 236 (437)
..+..|.+||+.+++. ..+..+...+..+.|+| +++. ++..+.+ ..|.+||+.......
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~------ 230 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSNVRK------ 230 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCCCEE------
T ss_pred eeccCCCcceEEEEECCCCcE--EeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCceeE------
Confidence 4677899999988653 23335677899999999 7775 4444333 368888886543211
Q ss_pred CCCCceEEEecCc--cccEEEEEEccCCCeEEEEEeCC----CeEEEEeCCCCCCceeeeeeecccCCceeeeecC-CCC
Q psy4571 237 DGPPELLFIHGGH--TAKISDFSWNPNEPWVICSVSED----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP-TAS 309 (437)
Q Consensus 237 ~~~~~~~~~~~~h--~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~ 309 (437)
+..+ ...+..++|+|+|+.+++.+..+ +.|++||+.+++....... .+. ...|+| ||+
T Consensus 231 ---------l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-----~~~-~~~~s~~dg~ 295 (396)
T 3c5m_A 231 ---------IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-----PPC-SHLMSNFDGS 295 (396)
T ss_dssp ---------SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-----CSE-EEEEECSSSS
T ss_pred ---------eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-----CCC-CCCccCCCCc
Confidence 1122 23578899999999555443322 4499999988764332221 111 278999 999
Q ss_pred cccccCCCCcccc-----cccccccccccccchhhhhhhhhcCCCc-----------cccccCCCCCCcccc
Q psy4571 310 STASESPTPTNSV-----HEKNYWQGLVLFDILVCEEQRQLLGTEE-----------ESSDRHSSDNDTEDL 365 (437)
Q Consensus 310 ~l~s~s~d~~~~~-----~~~~~~~~i~~wd~~~~~~~~~~~~h~~-----------~~~~~~~~~~~~~~~ 365 (437)
+++.++.+.-... +.......+.+||+.+++. ..+..+.. ......++|+|..++
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEE
Confidence 8886543210000 0011112388999988764 44555543 144556788887544
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-12 Score=125.31 Aligned_cols=304 Identities=10% Similarity=0.023 Sum_probs=195.4
Q ss_pred CCcceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE-EEecCceEEEEEee--ec---cccccCCCcce
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI-SCILNISILFFEII--FT---QNFPFPLSRQD 108 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i-~~~~~~~i~~~~~~--~~---~~~~~~~~v~~ 108 (437)
+...++++...++.|.++|..++. ...+.+++++..+ ++..++.|.+||+. .. ..++.......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 445677778888999999976543 3456677777766 55678899999983 22 23333445678
Q ss_pred EEee----CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----------CCC-CeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 109 VAWH----LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----------HTA-EVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 109 ~~~s----p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----------h~~-~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
++|+ |++...+++...++.|.|+|.. +.+.+..+.. |.. .+..+..++++...+++...+|.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~---t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGE---TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETT---TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECC---CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 9999 6544445555567999999987 4555554431 222 68889999988876777777899
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE--ecCccc
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTA 251 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~ 251 (437)
|.++|..+.+...............+.|+|+++++++++..++.|.++|+.+++.... +.. ...|.+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-----------i~vgg~~Phpg 390 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-----------EDTGGQTPHPG 390 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-----------EECSSSSBCCT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-----------EeccCcCCCCc
Confidence 9999998754322222233456778999999998777777789999999998643222 111 123432
Q ss_pred cEEEEEEccCCCeEEEEEe-CCCeEEEEeCCC-------CCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 252 KISDFSWNPNEPWVICSVS-EDNIMQEYCDST-------DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.-..+ ++|++..+.+++. .++.|.++|..+ .+.++.+.. ...+...+..+|+++++.....-+-
T Consensus 391 ~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~---~g~g~~~i~~~p~~~~l~v~~~~~~---- 462 (567)
T 1qks_A 391 RGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA---LGGGSLFIKTHPNSQYLYVDATLNP---- 462 (567)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC---SCSCCCCEECCTTCSEEEEECTTCS----
T ss_pred cceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec---CCCCCEEEEeCCCCCeEEEecCCCC----
Confidence 21122 5887554666664 568999999987 334444443 2244466778999998777552110
Q ss_pred ccccccccccccchhh-----h----hhh-----hhcCCCccccccCCCCCCccccccccc
Q psy4571 324 EKNYWQGLVLFDILVC-----E----EQR-----QLLGTEEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 324 ~~~~~~~i~~wd~~~~-----~----~~~-----~~~~h~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
+......|.++|+.+. . .+. .+......+....++++|.++..++|.
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred CcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec
Confidence 0000112677777766 1 111 111123457778899999988888885
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-12 Score=117.22 Aligned_cols=241 Identities=7% Similarity=-0.017 Sum_probs=159.1
Q ss_pred eeEEEEeeCCCcceEE-EeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 36 RFYRLCVAEPFDDAVE-ERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~-tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
....++++ +++.+++ +...++.|..|+..+...... . ......+.++++++
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~---~-----------------------~~~~~~p~~i~~~~- 76 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVL---P-----------------------FNGLYQPQGLAVDG- 76 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EEC---C-----------------------CCSCCSCCCEEECT-
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceE---e-----------------------eCCcCCcceeEECC-
Confidence 66778888 8888777 546777888887544322110 0 00113467899999
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
++.++++.. ++.|.+||.... . ...+. .....+.+++++++|. ++++...++.|.+|+..+... ........
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~~---~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~ 149 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGSN---N-QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ-TVLPFTGL 149 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTCS---C-CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC-EECCCCSC
T ss_pred CCCEEEEcC-CCEEEEEeCCCc---e-EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee-EeeccccC
Confidence 566665555 889999998732 2 22222 2235789999999987 677777789999998765433 21122233
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..+..++++|+|+ ++++...++.|.+||........ ....+...+.++++.++|. ++++...++
T Consensus 150 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~--------------~~~~~~~~p~~i~~d~~g~-l~v~~~~~~ 213 (270)
T 1rwi_B 150 NDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVV--------------LPFTDITAPWGIAVDEAGT-VYVTEHNTN 213 (270)
T ss_dssp CSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEE--------------CCCSSCCSEEEEEECTTCC-EEEEETTTS
T ss_pred CCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEe--------------ecccCCCCceEEEECCCCC-EEEEECCCC
Confidence 4678899999997 67777778899999987643211 1122235688999999996 787887889
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.|.+||........ .. ......+..++++++|+++++...++. |++++....+.
T Consensus 214 ~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~-----------v~~~~~~~~~~ 267 (270)
T 1rwi_B 214 QVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADRGNDR-----------VVKLTSLEHHH 267 (270)
T ss_dssp CEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEGGGTE-----------EEEECCCGGGS
T ss_pred cEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEECCCCE-----------EEEEcCCCccc
Confidence 99999987653322 11 111234667789999998888877777 66776655543
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.54 E-value=9.1e-12 Score=115.27 Aligned_cols=239 Identities=9% Similarity=0.026 Sum_probs=150.8
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.+..++|+ +++++++++..++.|.+|+..++.+..... .....+.+++|+| +
T Consensus 46 ~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------~~~~~~~~i~~~~-d 97 (333)
T 2dg1_A 46 QLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFV--------------------------SHKANPAAIKIHK-D 97 (333)
T ss_dssp CEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEE--------------------------CSSSSEEEEEECT-T
T ss_pred cccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEee--------------------------CCCCCcceEEECC-C
Confidence 34667777 777777777777778888776655433211 1124577899999 5
Q ss_pred CCEEEEEECC----CcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeC------CCeEEEEeCCCCc
Q psy4571 116 ESLFGSVADD----QKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSA------DKTVALWDLRNLK 183 (437)
Q Consensus 116 ~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~------dg~i~lwd~~~~~ 183 (437)
+.++++...+ +.|.+||..+. .....+. .+...+.+++++|+|. ++++... .+.|..+|.++++
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGD---NLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSC---SCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCC---EEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE
Confidence 6777766665 68999998743 2221221 3445799999999997 4665543 3566667766533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
...+......+..++|+|+++.++++.+.++.|.+||+... ....... ......+.++ ..+..++++++|
T Consensus 174 --~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~------~~~~~~~~~~-~~~~~i~~d~~G 244 (333)
T 2dg1_A 174 --VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG------ATIPYYFTGH-EGPDSCCIDSDD 244 (333)
T ss_dssp --EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE------EEEEEECCSS-SEEEEEEEBTTC
T ss_pred --EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc------ceEEEecCCC-CCCCceEECCCC
Confidence 22332334557899999999865666667889999999642 1111000 0011112232 467889999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
. ++++...++.|.+||.+ ++....+..... +...+..++|+||+..|..++.+
T Consensus 245 ~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 245 N-LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp C-EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred C-EEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8 77777788999999984 555555543211 00145677889998766655444
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.53 E-value=2.9e-12 Score=120.19 Aligned_cols=244 Identities=9% Similarity=0.008 Sum_probs=161.2
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCce-----------------eEEEecCCCCeEEEe--c-Cce
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFL-----------------YDLVVNNYVANISCI--L-NIS 88 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~-----------------~~~~~~~~~~~i~~~--~-~~~ 88 (437)
.++|+ |+++.++.+. .+++|.+||..+..+ ..+.+++++..+.+. . +++
T Consensus 54 ~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVS-NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEEC-TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred ceEEC-CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 78999 9999998876 367899999665433 245667777777443 2 578
Q ss_pred EEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe------eeeccCCCCeEEEEEe
Q psy4571 89 ILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS------HTVDAHTAEVNCLSFN 158 (437)
Q Consensus 89 i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~------~~~~~h~~~v~~l~~~ 158 (437)
|.+||....+.. +.. ....+.+.|.+...+++.+.||.+.+++.... .+.. ..+..+..++ .+.++
T Consensus 133 v~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (361)
T 2oiz_A 133 IGIVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGED--GKVASQSRSKQMFSVKDDPI-FIAPA 208 (361)
T ss_dssp EEEEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTT--SSEEEEEECCCCSCTTTSCB-CSCCE
T ss_pred EEEEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCC--CcEeeeccccceEcCCCCce-EEEec
Confidence 999997655432 221 12236678866678889999999999998642 2222 1122222222 34456
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceee-eEecc------C----CCceEEEEEcCCCCcEEEEEe----------CCCe
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKL-HSFES------H----KDEIFQVQWSPHNETILASSG----------TDRR 217 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~~------h----~~~v~~v~~~p~~~~~l~sg~----------~dg~ 217 (437)
+++.. ++..+.++.|.++|+......+ ..+.. + ......++|+|+++.++++.. .++.
T Consensus 209 ~~g~~-~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~ 287 (361)
T 2oiz_A 209 LDKDK-AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE 287 (361)
T ss_dssp ECSSE-EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred ccCCE-EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence 77775 6667789999999997643211 11110 0 111223789999887666554 1348
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC--CCceeeeeeecc
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD--SDTKTMRLDSIR 295 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~ 295 (437)
|.+||+.+.+ .+..+..+. +.+++|+|+|+ +|++++. +.|.+||..++ +.+..+.. .
T Consensus 288 v~viD~~t~~--------------~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l~~~~~i~~---~ 346 (361)
T 2oiz_A 288 IWVMDTKTKQ--------------RVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEPKLLRTIEG---A 346 (361)
T ss_dssp EEEEETTTTE--------------EEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSSSCEEEEEETT---S
T ss_pred EEEEECCCCc--------------EEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcceeeEEecc---C
Confidence 9999998863 344455655 89999999999 5556665 99999999998 66655421 2
Q ss_pred cCCceeeeecCCCC
Q psy4571 296 SNGGISSTASPTAS 309 (437)
Q Consensus 296 ~~~~~~~~~s~~g~ 309 (437)
...+..++++|+|.
T Consensus 347 G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 AEASLQVQFHPVGG 360 (361)
T ss_dssp CSSEEEEEECCCSC
T ss_pred CCCcEEEEecCCCC
Confidence 34566789999986
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-13 Score=138.60 Aligned_cols=232 Identities=10% Similarity=-0.065 Sum_probs=147.3
Q ss_pred cCCCcceEEeeCCCCCEEEEE--ECCCcEEEEEcCCCCCCCCeeeeccCCCCeE---------EEEEe--CCCCc-EEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSV--ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN---------CLSFN--PYSEY-ILAT 167 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~--~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~---------~l~~~--~~~~~-~l~s 167 (437)
+...+..++|++ +.-+++.. +.++...||.... ......+..|...+. ...|+ |||+. ++++
T Consensus 22 ~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 22 RSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRA---DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp TCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECT---TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred cCCccceeEEcC-CeEEEEecCcccCCcEEEEEECC---CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456788999998 45555555 4578899999742 234555666665655 56666 99996 4544
Q ss_pred EeCCCeEEEEeCC--C-CceeeeEecc-----CCCceEEEEEcCCCCcEEEEEeCC----------CeEEEEEcCC----
Q psy4571 168 GSADKTVALWDLR--N-LKLKLHSFES-----HKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSK---- 225 (437)
Q Consensus 168 gs~dg~i~lwd~~--~-~~~~~~~~~~-----h~~~v~~v~~~p~~~~~l~sg~~d----------g~i~vwd~~~---- 225 (437)
...+..|.++++. . +. ...+.. |...+..++|+|||+. |++++.| ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred ECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 4446677777776 2 23 344544 5678899999999996 6666655 5799999987
Q ss_pred --CCCCCCCCCCCCCCCceEEEec-CccccEEEEEEccCCCeEEEEEeCC--------CeEEEEeCC-CCCCceeeeeee
Q psy4571 226 --IGEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWVICSVSED--------NIMQEYCDS-TDSDTKTMRLDS 293 (437)
Q Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~~ 293 (437)
+.. ..+. .+...+..++|+|||+ .|+.++.+ ..|++||+. +++.........
T Consensus 175 ~~~~~---------------~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 175 DRSAV---------------RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp CGGGS---------------EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred cCCce---------------eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 321 1233 4456788899999999 45555533 479999998 452111112222
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc--------ccccCCCCCCcccc
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE--------SSDRHSSDNDTEDL 365 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~~~ 365 (437)
.+.......+|+|||+++++++.++... +..||..+++......++.+. +..+.+++++..+.
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~---------l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWN---------LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCE---------EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeE---------EEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 2234566779999999888777766421 566777666654433433322 23344556665443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.8e-13 Score=120.11 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=150.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
...+++|+|++..+++++..++.|..||... . ...+..+...+.+++++|+|. ++++...++.|.+||..+++.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcE
Confidence 4568999995434888888899999999983 2 556666778899999999998 577776778999999977553
Q ss_pred eeeEeccC----CCceEEEEEcCCCCcEEEEE----e-------------CCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 185 KLHSFESH----KDEIFQVQWSPHNETILASS----G-------------TDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 185 ~~~~~~~h----~~~v~~v~~~p~~~~~l~sg----~-------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
....... ...+..++++|+|+ ++++. . ..+.|..++.. +. +
T Consensus 103 -~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---------------~ 164 (296)
T 3e5z_A 103 -ESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---------------L 164 (296)
T ss_dssp -EEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---------------E
T ss_pred -EEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC---------------E
Confidence 2221111 23467899999997 57763 2 12345555543 21 1
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.....+......++|+|+++. +++.+.++.|.+|++. +++. ...... ......+..++++++|+++++. ++.
T Consensus 165 ~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~-- 238 (296)
T 3e5z_A 165 SAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDG-- 238 (296)
T ss_dssp EEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTE--
T ss_pred EEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCe--
Confidence 223345556789999999994 4788889999999997 4433 111111 2233345567899999977776 444
Q ss_pred ccccccccccccccchhhhhhhhhcCCCccccccCC-CCCCcccc
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS-SDNDTEDL 365 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~-~~~~~~~~ 365 (437)
|.+||.. |+.+..+..+.. +..+.+ .+++..+.
T Consensus 239 ---------v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~ 272 (296)
T 3e5z_A 239 ---------VHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLY 272 (296)
T ss_dssp ---------EEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEE
T ss_pred ---------EEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEE
Confidence 7888875 777777777766 777777 57775433
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-11 Score=112.12 Aligned_cols=155 Identities=15% Similarity=0.180 Sum_probs=113.1
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
..+.+++++| ++.++++...++.|.+||.. .+.+..+. .+...+..++++|+|. ++++...++.|++||...
T Consensus 121 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 121 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp SCEEEEEECT-TSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTC
T ss_pred CCceEEEEeC-CCCEEEEECCCCEEEEEcCC----CCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCC
Confidence 3567899999 56788777778999999965 33344443 3445789999999988 688878899999999864
Q ss_pred CceeeeEeccC--CCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc--cccEEEE
Q psy4571 182 LKLKLHSFESH--KDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH--TAKISDF 256 (437)
Q Consensus 182 ~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l 256 (437)
+. +..+..+ ...+..++++|+|+ ++++...++ .|.+||... + .+..+..+ ...+.++
T Consensus 195 -~~-~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g-~--------------~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 195 -QY-LRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG-Q--------------LISALESKVKHAQCFDV 256 (286)
T ss_dssp -CE-EEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS-C--------------EEEEEEESSCCSCEEEE
T ss_pred -CE-EEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC-C--------------EEEEEcccCCCCcceeE
Confidence 33 4455332 35789999999997 677777775 999999643 2 12223222 2347899
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+++|+|+ ++++ +.|+.|++|+.....
T Consensus 257 ~~~~~g~-l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 257 ALMDDGS-VVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEETTTE-EEEE-ETTTEEEEEECSCCC
T ss_pred EECCCCc-EEEE-CCCCeEEEEEccccc
Confidence 9999997 7766 579999999987643
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-12 Score=124.74 Aligned_cols=254 Identities=9% Similarity=-0.002 Sum_probs=169.4
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
++...++.|.++|....+ .++....+..+.|+| +++++++++.|+.|.+||+... ..+.+..+... .....++|
T Consensus 171 V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~-t~~~v~~i~~G-~~P~~ia~ 247 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMK-EPTTVAEIKIG-SEARSIET 247 (567)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSS-SCCEEEEEECC-SEEEEEEE
T ss_pred EEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECC-CCCEEEEEcCCCeEEEEECCCC-CCcEeEEEecC-CCCceeEE
Confidence 355567899999976543 344556778999999 6788888899999999999511 23555555543 34678999
Q ss_pred e----CCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc----------CCC-ceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 158 N----PYSEYILATGSADKTVALWDLRNLKLKLHSFES----------HKD-EIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 158 ~----~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~----------h~~-~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
+ |+|++++++...+++|.++|..+.+. +..+.. |.. .+..+..+++++.++++...+|.|.++|
T Consensus 248 s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTTCCE-EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred ccccCCCCCEEEEEEccCCeEEEEECCCCcE-EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 9 69998667777789999999998664 444321 222 6788999999887777777889999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee-eeccc-CCce
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-DSIRS-NGGI 300 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~-~~~~ 300 (437)
........ +... .......++.|+|+|+++++++..++.|.++|+.+++....+.. ....+ ....
T Consensus 327 ~~~~~~~~------------v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 327 YTDLNNLK------------TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp TTCSSEEE------------EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred cCCCccce------------eeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 87643111 1111 22335678899999998888887889999999999987766654 32222 1222
Q ss_pred eeeecCCCC-cccccC-CCCcccccccccccccccccchh-------hhhhhhhcCCCccccccCCCCCCcc
Q psy4571 301 SSTASPTAS-STASES-PTPTNSVHEKNYWQGLVLFDILV-------CEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 301 ~~~~s~~g~-~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~-------~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
. .++|++. .++++. .++. |.++|..+ .+.++++.+.......+..+|++..
T Consensus 394 ~-~~~p~~g~v~~t~~~g~~~-----------Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 394 N-FVHPTFGPVWATSHMGDDS-----------VALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp E-EEETTTEEEEEEEBSSSSE-----------EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred e-eECCCCCcEEEeCCCCCCe-----------EEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 2 2578744 444443 4456 55555555 3344555443322334456777653
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.5e-13 Score=128.54 Aligned_cols=229 Identities=10% Similarity=-0.014 Sum_probs=141.5
Q ss_pred cceEEeeCCCCCEEEEEEC-CCc--EEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 106 RQDVAWHLLHESLFGSVAD-DQK--LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~-dg~--v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
+...+|+| +++.|+.++. +|. |.+||+.+ .+......++...+..++|+|+|+. |+.++.++.|.+||+.++
T Consensus 38 ~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~~~~~~~~~~spdg~~-l~~~~~~~~l~~~d~~~g 112 (388)
T 3pe7_A 38 FYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGRGDNTFGGFLSPDDDA-LFYVKDGRNLMRVDLATL 112 (388)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSSCBCSSSCEECTTSSE-EEEEETTTEEEEEETTTC
T ss_pred hcCccCCC-CCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCCCCCccceEEcCCCCE-EEEEeCCCeEEEEECCCC
Confidence 34478999 5777777776 674 78888873 3444444555555556789999996 888889999999999986
Q ss_pred ceeeeEeccCCCceEEEE--EcCCCCcEEEEE----------------------eCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 183 KLKLHSFESHKDEIFQVQ--WSPHNETILASS----------------------GTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~--~~p~~~~~l~sg----------------------~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+. ......+...+.... ++|++.. ++.. ..+..|.+||+.+++.
T Consensus 113 ~~-~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~---------- 180 (388)
T 3pe7_A 113 EE-NVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES---------- 180 (388)
T ss_dssp CE-EEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE----------
T ss_pred cc-eeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECCCCce----------
Confidence 65 434444555454443 4899984 5422 2446799999987532
Q ss_pred CCceEEEecCccccEEEEEEcc-CCCeEEEEEeC------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNP-NEPWVICSVSE------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 311 (437)
..+..+...+..++|+| +|+. ++..+. +..|.++|..+++. ..+.... ........+|||||+.|
T Consensus 181 -----~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~-~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 181 -----TVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA-EGESCTHEFWVPDGSAL 252 (388)
T ss_dssp -----EEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC-TTEEEEEEEECTTSSCE
T ss_pred -----EEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC-CCcccccceECCCCCEE
Confidence 22334556789999999 9984 444443 34788888876543 2222110 00124456899999988
Q ss_pred cccCCCCcccccccccccccccccchhhhhhh--hhcCCCcc---ccccCCCCCCcccc
Q psy4571 312 ASESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QLLGTEEE---SSDRHSSDNDTEDL 365 (437)
Q Consensus 312 ~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~~~h~~~---~~~~~~~~~~~~~~ 365 (437)
+..+.+.. .....+.+||+.+|+... .+.++... .....++|+|..++
T Consensus 253 ~~~~~~~~------~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 253 VYVSYLKG------SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp EEEEEETT------CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred EEEecCCC------CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcce
Confidence 66443211 000127899999887422 22221110 22235777776554
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.7e-12 Score=116.84 Aligned_cols=228 Identities=10% Similarity=0.023 Sum_probs=151.6
Q ss_pred ceeEEEEeeCCCcc-eEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 35 YRFYRLCVAEPFDD-AVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 35 ~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
.....++|+ |+++ +++++..++.|..|+..++ ..... . ....+.+++++|
T Consensus 28 ~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~--~-------------------------~~~~~~~l~~~~ 78 (296)
T 3e5z_A 28 TWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQ-LSPEM--H-------------------------PSHHQNGHCLNK 78 (296)
T ss_dssp SSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSC-EEEEE--S-------------------------SCSSEEEEEECT
T ss_pred ccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCC-eEEEE--C-------------------------CCCCcceeeECC
Confidence 345678999 8887 7888888899999998766 32211 1 113467899999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEEeCCCCcEEEEE----e-------------CCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSFNPYSEYILATG----S-------------ADK 172 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~sg----s-------------~dg 172 (437)
++.++++...++.|.+||..++ +....... ....+..++++|+|. ++++. + ..+
T Consensus 79 -dg~l~v~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 79 -QGHLIACSHGLRRLERQREPGG---EWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp -TCCEEEEETTTTEEEEECSTTC---CEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred -CCcEEEEecCCCeEEEEcCCCC---cEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCc
Confidence 5777776666789999998643 22221111 123467899999998 57763 2 134
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCC-CCCCCCCCCCCceEEEecCccc
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
.|..++.. ++ ...+..+......++|+|+++. +++.+.++.|.+|++...... .. ...+..+..
T Consensus 154 ~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~-----------~~~~~~~~~ 218 (296)
T 3e5z_A 154 WVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQ-----------GVHFTVEPG 218 (296)
T ss_dssp EEEEECTT-SC--EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEE-----------EEEECCSSS
T ss_pred EEEEECCC-CC--EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCC-----------CeEeeCCCC
Confidence 56666654 23 3444556677899999999985 588888899999999732111 00 011123445
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCcccccCCCCc
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASESPTPT 319 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~s~s~d~~ 319 (437)
.+.++++.++|. +.++. ++.|.+||.. ++....+.. +.. +..++| +|+++.|..++.++.
T Consensus 219 ~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~---~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 219 KTDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLT---PQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp CCCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEEC---SSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred CCCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEEC---CCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 567899999998 66555 8899999987 655555543 222 666788 689988888776653
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=9.7e-11 Score=106.21 Aligned_cols=265 Identities=6% Similarity=-0.062 Sum_probs=169.6
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
....+.++++. +++.++++...++.+..|+.. +......... ....+.+++++
T Consensus 13 ~~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~-------------------------~~~~~~~i~~~ 65 (299)
T 2z2n_A 13 QDTGPYGITVS-DKGKVWITQHKANMISCINLD-GKITEYPLPT-------------------------PDAKVMCLTIS 65 (299)
T ss_dssp SSCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEEEEECSS-------------------------TTCCEEEEEEC
T ss_pred cCCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeEEecCCc-------------------------ccCceeeEEEC
Confidence 34567888888 888888777667888888876 4433221110 11356788999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
+ ++.++++...++.|..||... ......+......+.++++++++. ++++...++.|..||. +++.........
T Consensus 66 ~-~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 66 S-DGEVWFTENAANKIGRITKKG---IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp T-TSCEEEEETTTTEEEEECTTS---CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred C-CCCEEEeCCCCCeEEEECCCC---cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 8 567777766688899998761 111111222455789999999887 5777777889999998 444322223334
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
...+..+++.|+|. ++++...++.|..||. ++.... .....+...+.++++.++|. +.++...+
T Consensus 140 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-------------~~~~~~~~~~~~i~~~~~g~-l~v~~~~~ 203 (299)
T 2z2n_A 140 GSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDITE-------------FKIPTPASGPVGITKGNDDA-LWFVEIIG 203 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEE-------------EECSSTTCCEEEEEECTTSS-EEEEETTT
T ss_pred CCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcEEE-------------eeCCCCCCcceeEEECCCCC-EEEEccCC
Confidence 56789999999996 6777666789999998 432110 11223345688999999998 77777678
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh-hcCCCcc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEE 351 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~ 351 (437)
+.|..||. +++. ..+... .....+..++++++|.++++...++. +..||. +++.... +.++...
T Consensus 204 ~~i~~~~~-~g~~-~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~-----------i~~~d~-~g~~~~~~~~~~~~~ 268 (299)
T 2z2n_A 204 NKIGRITT-SGEI-TEFKIP-TPNARPHAITAGAGIDLWFTEWGANK-----------IGRLTS-NNIIEEYPIQIKSAE 268 (299)
T ss_dssp TEEEEECT-TCCE-EEEECS-STTCCEEEEEECSTTCEEEEETTTTE-----------EEEEET-TTEEEEEECSSSSCC
T ss_pred ceEEEECC-CCcE-EEEECC-CCCCCceeEEECCCCCEEEeccCCce-----------EEEECC-CCceEEEeCCCCCCc
Confidence 89999999 6543 223221 12344566788999997777655555 566665 3332111 1233334
Q ss_pred ccccCCCCCCc
Q psy4571 352 SSDRHSSDNDT 362 (437)
Q Consensus 352 ~~~~~~~~~~~ 362 (437)
+..+.+ ++|.
T Consensus 269 ~~~i~~-~~g~ 278 (299)
T 2z2n_A 269 PHGICF-DGET 278 (299)
T ss_dssp EEEEEE-CSSC
T ss_pred cceEEe-cCCC
Confidence 555555 6555
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.6e-12 Score=117.23 Aligned_cols=226 Identities=10% Similarity=0.028 Sum_probs=143.8
Q ss_pred EEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-----CCe
Q psy4571 81 ISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-----AEV 152 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-----~~v 152 (437)
++...++.|.++|....+. ++.......++++| ++.++++...++.|.+||+.+ .+....+.... ...
T Consensus 58 v~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t---~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 58 IVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKT---YEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTT---TEEEEEEECTTCCTTTCBC
T ss_pred EEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCC---CeEEEEEEcCCccccCCCc
Confidence 3444567888888654432 33345678999988 455555544789999999983 44444443222 145
Q ss_pred EEEEEeCCCCcEEEEEe-CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC----------CeEEEE
Q psy4571 153 NCLSFNPYSEYILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVW 221 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d----------g~i~vw 221 (437)
..+++ ++..++++.. .++.|.++|+.+++. ...+.. ......++++|+|+ +++++..+ +.|.++
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEE
Confidence 56777 3554455544 489999999998664 445543 33457899999997 56666544 789999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
|..+.+... .+.. .......++|+|+++.+++ +.. .|.+||..+++......... ....+.
T Consensus 209 d~~t~~v~~--------------~~~~~~g~~p~~la~~~d~~~lyv-~~~--~v~~~d~~t~~~~~~~~~~~-~~~~p~ 270 (328)
T 3dsm_A 209 DAETFTVEK--------------QFKFKLGDWPSEVQLNGTRDTLYW-INN--DIWRMPVEADRVPVRPFLEF-RDTKYY 270 (328)
T ss_dssp ETTTTEEEE--------------EEECCTTCCCEEEEECTTSCEEEE-ESS--SEEEEETTCSSCCSSCSBCC-CSSCEE
T ss_pred ECCCCeEEE--------------EEecCCCCCceeEEEecCCCEEEE-Ecc--EEEEEECCCCceeeeeeecC-CCCceE
Confidence 998754221 1221 1235789999999995544 433 89999999887532111110 124466
Q ss_pred eeeecC-CCCccccc----CCCCcccccccccccccccccchhhhhhhhh
Q psy4571 301 SSTASP-TASSTASE----SPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 301 ~~~~s~-~g~~l~s~----s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
.++++| ++.+.++. ..++. |.+||.. |+.+.++
T Consensus 271 gi~vdp~~g~lyva~~~~y~~~~~-----------V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 271 GLTVNPNNGEVYVADAIDYQQQGI-----------VYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEEECTTTCCEEEEECTTSSSEEE-----------EEEECTT-CCEEEEE
T ss_pred EEEEcCCCCeEEEEcccccccCCE-----------EEEECCC-CCEEEEE
Confidence 678999 55666665 44555 7788876 7766665
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.7e-12 Score=130.25 Aligned_cols=185 Identities=9% Similarity=-0.012 Sum_probs=118.3
Q ss_pred ceEEeeCCCCCEEEEEECCCc-------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 107 QDVAWHLLHESLFGSVADDQK-------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~-------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
..++|+| ++..|+.++.|.. |++|++.++... ..+.....|...+..+.|+|+|++ |+.++.++
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~ 248 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY-LFVYILRG 248 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC-EEEEEEET
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE-EEEEEeCC
Confidence 6899999 6778888887766 999999854321 123333345567899999999998 55554444
Q ss_pred ----eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 173 ----TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 173 ----~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.|.+++..++. ...+..+...+....+ |+|. +++.+. .++.|.+||+.++.... ....
T Consensus 249 ~~~~~l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~-----------~~~l 313 (695)
T 2bkl_A 249 WSENDVYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS-----------WKEI 313 (695)
T ss_dssp TTEEEEEEECTTCSS--CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG-----------CEEE
T ss_pred CCceEEEEEcCCCCc--eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC-----------CeEE
Confidence 56666655433 4455556666666666 6777 676665 35789999987653210 0111
Q ss_pred ecCc-cccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 246 HGGH-TAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 246 ~~~h-~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
...+ ...+..++|+ ++. ++++...|+..++|.+. +++....+... ....+..++++|++..++
T Consensus 314 ~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 314 VPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLKGKPVRTVQLP--GVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp ECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCCEEEECCCS--SSSEECCCBSCTTCSEEE
T ss_pred ecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCCCCeeEEecCC--CCeEEEEeecCCCCCEEE
Confidence 2222 4567888887 444 88899999998888665 34433333221 122334457888887666
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-12 Score=116.74 Aligned_cols=196 Identities=13% Similarity=0.052 Sum_probs=140.2
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC-C
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH-K 193 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-~ 193 (437)
+++|++++.++.|.+||.+ +++.+..+..+. ..+.++.++|+|+ +++ +.++.|..||. +++. +..+..+ .
T Consensus 5 ~~~lv~~~~~~~v~~~d~~---tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~-~W~~~~~~~ 76 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKD---TKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE-LWNIAAPAG 76 (276)
T ss_dssp CEEEEECTTCSEEEEEETT---TTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE-EEEEECCTT
T ss_pred CcEEEeeCCCCEEEEEECC---CCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE-EEEEcCCCC
Confidence 5789999999999999997 566777777665 4788999999998 466 45788999999 6565 6677654 3
Q ss_pred CceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 194 DEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
..+.++.+.|+|+. +++.+. ++.|..+|. .++......... ....+......+++.++|+ ++++...+
T Consensus 77 ~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~--------~~~~~~~~~~~v~~~~~G~-~lv~~~~~ 145 (276)
T 3no2_A 77 CEMQTARILPDGNA-LVAWCGHPSTILEVNM-KGEVLSKTEFET--------GIERPHAQFRQINKNKKGN-YLVPLFAT 145 (276)
T ss_dssp CEEEEEEECTTSCE-EEEEESTTEEEEEECT-TSCEEEEEEECC--------SCSSGGGSCSCCEECTTSC-EEEEETTT
T ss_pred ccccccEECCCCCE-EEEecCCCCEEEEEeC-CCCEEEEEeccC--------CCCcccccccCceECCCCC-EEEEecCC
Confidence 57889999999984 667666 777777775 333221110000 0012223455667889999 78889999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
+.|..||.+ |+.+..+... ..+..+...++|.+++++..++. +..+|..+|+.+..+.
T Consensus 146 ~~v~~~d~~-G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~-----------v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHC-----------FVQLNLESNRIVRRVN 203 (276)
T ss_dssp TEEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEECBTTSE-----------EEEECTTTCCEEEEEE
T ss_pred CEEEEECCC-CCEEEEEECC----CCccceeEcCCCCEEEEeCCCCe-----------EEEEeCcCCcEEEEec
Confidence 999999998 8887777642 34555677899999988887766 5666766666655553
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.5e-12 Score=116.10 Aligned_cols=223 Identities=9% Similarity=0.020 Sum_probs=135.8
Q ss_pred cCceEeeecCCCc------eeEEEecCCCCeEEEecC----c--eEEEEEeeecccc---ccCCCcceEEeeCCCCCEEE
Q psy4571 56 NEEYKIWKKNTPF------LYDLVVNNYVANISCILN----I--SILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 56 d~~v~iw~~~~~~------~~~~~~~~~~~~i~~~~~----~--~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~ 120 (437)
+..+.+|+..++. +....|+|++..+....+ + .|.+|++..++.. ..+. +..++|+| +++.|+
T Consensus 42 ~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wsp-dg~~l~ 119 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNE-DSRKLL 119 (347)
T ss_dssp EEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECT-TSSEEE
T ss_pred cceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECC-CCCEEE
Confidence 5567788876654 345678888887755432 3 3666665443322 2233 88999999 566666
Q ss_pred EEEC---------------------------CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-
Q psy4571 121 SVAD---------------------------DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK- 172 (437)
Q Consensus 121 ~~~~---------------------------dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg- 172 (437)
.++. ...|.+||+.++ +.+..+.. . .+..++|+|+| +++++..++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~ 192 (347)
T 2gop_A 120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREI 192 (347)
T ss_dssp EEEECCCC---------CCCC---------CEEEEEEEETTTT---EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCS
T ss_pred EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC---eEEeeecC-C-CcccccCCCCe--EEEEEecccc
Confidence 6653 256889998743 33233333 3 78899999999 577776542
Q ss_pred ------eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--------CeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 173 ------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--------RRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 173 ------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
...||.+++ .. ...+..+ ..+..+ +|+|+. |+.++.+ ..|.+|| +++.
T Consensus 193 ~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~~~---------- 254 (347)
T 2gop_A 193 IPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GKEV---------- 254 (347)
T ss_dssp SCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SSCE----------
T ss_pred cccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CCce----------
Confidence 344444443 33 3344444 555544 999997 4444433 3677887 3221
Q ss_pred CCceEEEecCccccEEE-EEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 239 PPELLFIHGGHTAKISD-FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~-l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
.....+|...+.. +.|+ ++ ++++++.++.+++| +.+++. ..+.. ....+..++++| .++++++.+
T Consensus 255 ----~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~-~~~~~---~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 255 ----MGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGEI-KPIAK---GRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp ----EESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSSE-EEEEC---SSSEEEEEEESS--SEEEEEECS
T ss_pred ----EeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCce-EEEec---CCCeEEeeeeeC--cEEEEEcCC
Confidence 1223455667886 8999 76 78889999999999 875433 22211 233445568888 566665555
Q ss_pred Cc
Q psy4571 318 PT 319 (437)
Q Consensus 318 ~~ 319 (437)
+.
T Consensus 321 ~~ 322 (347)
T 2gop_A 321 TR 322 (347)
T ss_dssp SS
T ss_pred CC
Confidence 44
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-12 Score=133.30 Aligned_cols=231 Identities=10% Similarity=-0.024 Sum_probs=150.0
Q ss_pred CcceEEeeCCCCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++||.+..++ .|++||+.++ +.......+ ..+..++|+|||+. |+.++.++.
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~~~~-~~~~~~~wspDg~~-l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGA---KELPDVLER-VKFSCMAWTHDGKG-MFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTT---EEEEEEEEE-ECSCCEEECTTSSE-EEEEECCCCSSCCSS
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCC---CCCcccccC-cccceEEEEeCCCE-EEEEEECCccccccc
Confidence 467899999 567777655433 8999999843 333221111 23667999999996 777777665
Q ss_pred ----------EEEEeCCCCcee---eeEeccCCCceEEEEEcCCCCcEEEEEeC----CCeEEEEEcCC------CCCCC
Q psy4571 174 ----------VALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSK------IGEEQ 230 (437)
Q Consensus 174 ----------i~lwd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~sg~~----dg~i~vwd~~~------~~~~~ 230 (437)
|.+|++.++... +.....|...+..+.|+|+|++++++... +..|++||+.+ +..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-- 277 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-- 277 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--
Confidence 999999886521 22222345568899999999975544432 56899999976 211
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCC--ceeeeeeecccCCceeeeec
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s 305 (437)
.+..+..+...+.. .|+|+|+.+++.+..+ +.|.+||+.++.. .+.+.... .......++++
T Consensus 278 -----------~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 344 (710)
T 2xdw_A 278 -----------KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACV 344 (710)
T ss_dssp -----------CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEE
T ss_pred -----------ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEE
Confidence 11223344444444 4889998666555433 4799999988742 23332211 11123345778
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+++.++++...++... +.+||+.+|+.++.+..+...+..+.+++++..+.
T Consensus 345 ~~~~lv~~~~~~g~~~---------l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNT---------LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp TTTEEEEEEEETTEEE---------EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred cCCEEEEEEEECCEEE---------EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 7888888887776532 67788777877777777777777788888876544
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.6e-11 Score=106.43 Aligned_cols=217 Identities=8% Similarity=-0.065 Sum_probs=151.4
Q ss_pred CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC
Q psy4571 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD 125 (437)
Q Consensus 46 ~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 125 (437)
.+++|++++.|+.|.+|+..++.+.-..-.+. ...+.+++++| ++++|+ +.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-------------------------~~~~~~~~~~p-dG~ilv--s~~ 55 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-------------------------GWECNSVAATK-AGEILF--SYS 55 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT-------------------------TCCCCEEEECT-TSCEEE--ECB
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-------------------------cCCCcCeEECC-CCCEEE--eCC
Confidence 46889999999999999987776543221110 12467889999 677777 457
Q ss_pred CcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCceeeeEec------cCCCceE
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLKLKLHSFE------SHKDEIF 197 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~~~~~~~~------~h~~~v~ 197 (437)
+.|..||.. ++.+..+..+ ...+.++.+.|+|.. +++.+. ++.|..+|.. ++. +..+. .+.....
T Consensus 56 ~~V~~~d~~----G~~~W~~~~~~~~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~~-Gk~-l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 56 KGAKMITRD----GRELWNIAAPAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMK-GEV-LSKTEFETGIERPHAQFR 128 (276)
T ss_dssp SEEEEECTT----SCEEEEEECCTTCEEEEEEECTTSCE-EEEEESTTEEEEEECTT-SCE-EEEEEECCSCSSGGGSCS
T ss_pred CCEEEECCC----CCEEEEEcCCCCccccccEECCCCCE-EEEecCCCCEEEEEeCC-CCE-EEEEeccCCCCccccccc
Confidence 789999983 4566666654 347889999999995 777776 7888888863 343 44332 1222345
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
.+++.++|+ ++++...++.|.+||.. ++. +..+... ..+.++...++|+ ++++++.++.|..
T Consensus 129 ~v~~~~~G~-~lv~~~~~~~v~~~d~~-G~~--------------~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~ 190 (276)
T 3no2_A 129 QINKNKKGN-YLVPLFATSEVREIAPN-GQL--------------LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQ 190 (276)
T ss_dssp CCEECTTSC-EEEEETTTTEEEEECTT-SCE--------------EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEE
T ss_pred CceECCCCC-EEEEecCCCEEEEECCC-CCE--------------EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEE
Confidence 667889998 58888899999999987 543 3334433 3455677889998 7878888889999
Q ss_pred EeCCCCCCceeeeeeecc---cCCceeeeecCCCCcccccC
Q psy4571 278 YCDSTDSDTKTMRLDSIR---SNGGISSTASPTASSTASES 315 (437)
Q Consensus 278 wd~~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~l~s~s 315 (437)
+|..+++.+..+...... ...+..+...++|.++++..
T Consensus 191 ~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 191 LNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp ECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999888777632211 11234456778998888763
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.4e-12 Score=118.80 Aligned_cols=223 Identities=9% Similarity=0.015 Sum_probs=132.6
Q ss_pred CceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC---C--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 86 NISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD---Q--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 86 ~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---g--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
++.|.+|++..++...+ ..+..++|+| +++.|+.++.+ + .|.+||+.. .+..... .+.. +..++|+|+
T Consensus 42 ~~~l~~~d~~~~~~~~l-~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~-~~~~-~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLET---LSSKKIL-EAKN-IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTCCEEEE-ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEE-EESE-EEEEEECTT
T ss_pred cceEEEEeCCCCceEEc-ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCC---CceEEEE-cCCC-ccceeECCC
Confidence 34567777654443333 5678899999 56777766543 3 377778763 2333222 2233 999999999
Q ss_pred CCcEEEEEeC---------------------------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 161 SEYILATGSA---------------------------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 161 ~~~~l~sgs~---------------------------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
|+. |+.++. ...|.+||+.+++. +..+.. . .+..++|+|+| +++++.
T Consensus 115 g~~-l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg--~~~~~~ 188 (347)
T 2gop_A 115 SRK-LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK--IVVNVP 188 (347)
T ss_dssp SSE-EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE--EEEEEE
T ss_pred CCE-EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe--EEEEEe
Confidence 997 555542 25799999988553 234443 3 78899999999 566665
Q ss_pred CCC-------eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC-------CCeEEEEe
Q psy4571 214 TDR-------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE-------DNIMQEYC 279 (437)
Q Consensus 214 ~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-------dg~i~iwd 279 (437)
.++ ...+|.+.++. . ..+..+ ..+..+ +|+|+.+++.+.. ...|.+||
T Consensus 189 ~~~~~~~~~~~~~l~~~d~~~-~--------------~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWEDGK-E--------------EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CCCSSCCSSCCEEEEEEETTE-E--------------EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccccccccEEEeCCCc-e--------------EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 542 34455444221 1 112223 445444 9999955444432 24788888
Q ss_pred CCCCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
+++.. .+. ..+...... ..|+ +| ++++++.++. .++| +.+|+. ..+..+...+..+.++
T Consensus 251 --~~~~~-~l~--~~~~~~~~~~~~~s-dg-~~~~~~~~~~-----------~~l~-~~~g~~-~~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 251 --GKEVM-GIL--DEVDRGVGQAKIKD-GK-VYFTLFEEGS-----------VNLY-IWDGEI-KPIAKGRHWIMGFDVD 310 (347)
T ss_dssp --SSCEE-ESS--TTCCSEEEEEEEET-TE-EEEEEEETTE-----------EEEE-EESSSE-EEEECSSSEEEEEEES
T ss_pred --CCceE-ecc--ccCCcccCCccEEc-Cc-EEEEEecCCc-----------EEEE-EcCCce-EEEecCCCeEEeeeee
Confidence 44322 211 111223333 6788 88 8888887776 5777 665544 3444445566666666
Q ss_pred C
Q psy4571 359 D 359 (437)
Q Consensus 359 ~ 359 (437)
+
T Consensus 311 ~ 311 (347)
T 2gop_A 311 E 311 (347)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.9e-12 Score=118.19 Aligned_cols=176 Identities=15% Similarity=0.152 Sum_probs=129.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC--------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+++.+++++ ..+++++|+.++ +.+|+++... ...+... ..+.. |..++| ++.. |+++ .++.|++
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~-L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQ-VLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTE-EEEE-ESSEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCE-EEEE-cCCcEEE
Confidence 689999999 677888898875 5669875321 1122222 24666 999999 7774 7777 8899999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
||+++... ......|..++.++.+.+. . ++++..||.|.+||+..... ..+...|+++
T Consensus 111 ~dv~sl~~-~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~------------------~~~~~~Vs~v 168 (388)
T 1xip_A 111 LDLEELSE-FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST------------------KQLAQNVTSF 168 (388)
T ss_dssp EESSSTTC-EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE------------------EEEEESEEEE
T ss_pred EEchhhhc-cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc------------------ccccCCceEE
Confidence 99998664 5556677888988877654 3 77889999999999987542 1245689999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCC--ceeeeeee------cccCCceeeeecCCCCcccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSD--TKTMRLDS------IRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~------~~~~~~~~~~~s~~g~~l~s 313 (437)
+|+|+| ++.|..||.+++|+...++. ..++.... .+...+..+.|.+++.++++
T Consensus 169 ~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 169 DVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999999 45788999999999887654 33442111 13455777899999998875
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-10 Score=105.02 Aligned_cols=224 Identities=10% Similarity=0.033 Sum_probs=149.3
Q ss_pred eeEEEEeeCCCcceEEE-------eeccCceEeeecCCCc---------------eeEEEecCC-CCeEEEecCceEEEE
Q psy4571 36 RFYRLCVAEPFDDAVEE-------RVINEEYKIWKKNTPF---------------LYDLVVNNY-VANISCILNISILFF 92 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~t-------gs~d~~v~iw~~~~~~---------------~~~~~~~~~-~~~i~~~~~~~i~~~ 92 (437)
....++|. +++.++++ +..++.+..|+..++. +..+.+.+. .....+.....|.+|
T Consensus 19 ~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 45678898 88988888 6788889999854433 334445555 443444445578888
Q ss_pred Eeeecccccc---------CCCcceEEeeCCCCCEEEEEECC---------------CcEEEEEcCCCCCCCCeeeeccC
Q psy4571 93 EIIFTQNFPF---------PLSRQDVAWHLLHESLFGSVADD---------------QKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 93 ~~~~~~~~~~---------~~~v~~~~~sp~~~~~l~~~~~d---------------g~v~vwd~~~~~~~~~~~~~~~h 148 (437)
|.. ++.... ...+.+++++| ++.++++...+ +.|..+|.. .+ ...+..+
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~-~~~~~~~ 170 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQ-MIQVDTA 170 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SC-EEEEEEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC----CC-EEEeccC
Confidence 765 332111 12478999999 56777665544 456666654 12 2222233
Q ss_pred CCCeEEEEEe----CCCCcEEEEEeCCCeEEEEeCC-CCce----eeeEeccCC-CceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 149 TAEVNCLSFN----PYSEYILATGSADKTVALWDLR-NLKL----KLHSFESHK-DEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 149 ~~~v~~l~~~----~~~~~~l~sgs~dg~i~lwd~~-~~~~----~~~~~~~h~-~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
......++|+ |+++.++++...++.|.+||.+ ++.. ....+..+. ..+..++++++|. ++++...++.|
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i 249 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHI 249 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEE
Confidence 3457889999 9997655666678999999986 3321 122333333 5678999999997 67777778899
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.+||..+++.. ..+..+...+.+++|+|+++.++++...++.|..|++..
T Consensus 250 ~~~d~~~g~~~--------------~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPK--------------MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCS--------------EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCCcEe--------------EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99998754322 223344567899999999986666777778999999874
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-11 Score=110.42 Aligned_cols=221 Identities=7% Similarity=-0.043 Sum_probs=143.6
Q ss_pred CcceEEeeCCCCCEEE-EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFG-SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~-~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
...+++++| ++.+++ +...++.|.+||.... ........+...+.+++++++|. ++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGST---GTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCc---ccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCce
Confidence 677899999 566776 4467889999987632 22211123335678899999988 566655 8899999988643
Q ss_pred eeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. ..+. .....+..+++.|+|. ++++...++.|.+|+..+.... .........+.+++++|+|
T Consensus 99 ~--~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~p~~i~~~~~g 161 (270)
T 1rwi_B 99 Q--TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQT--------------VLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp C--EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCE--------------ECCCCSCCSCCCEEECTTC
T ss_pred E--eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeE--------------eeccccCCCceeEEEeCCC
Confidence 2 2232 2235689999999997 6777777889999975443211 1111222356789999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
+ ++++...++.|.+||.......... ......+..++++++|.++++...++. +.+||.......
T Consensus 162 ~-l~v~~~~~~~i~~~~~~~~~~~~~~---~~~~~~p~~i~~d~~g~l~v~~~~~~~-----------v~~~~~~~~~~~ 226 (270)
T 1rwi_B 162 N-VYVTDTDNNRVVKLEAESNNQVVLP---FTDITAPWGIAVDEAGTVYVTEHNTNQ-----------VVKLLAGSTTST 226 (270)
T ss_dssp C-EEEEEGGGTEEEEECTTTCCEEECC---CSSCCSEEEEEECTTCCEEEEETTTSC-----------EEEECTTCSCCE
T ss_pred C-EEEEECCCCEEEEEecCCCceEeec---ccCCCCceEEEECCCCCEEEEECCCCc-----------EEEEcCCCCcce
Confidence 8 7878778899999998875432211 111244566789999987777766666 666776544332
Q ss_pred hhhcCCCccccccCCCCCCcc
Q psy4571 343 RQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~~~~~ 363 (437)
.....+...+..+.+.++|..
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCE
T ss_pred eeccCCCCCceeEEECCCCCE
Confidence 222233345667778888763
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.4e-11 Score=112.04 Aligned_cols=218 Identities=10% Similarity=-0.019 Sum_probs=134.3
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCC------------------------------CeEEE------
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYV------------------------------ANISC------ 83 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~------------------------------~~i~~------ 83 (437)
+.|+ |+++.|+..+.++.+.+|+..++....+...+.. ..+..
T Consensus 86 ~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 86 GFIS-TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp CEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred ceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 5677 9999999999999999999877665444321111 11100
Q ss_pred ecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCCCeeeeccC--CCCe
Q psy4571 84 ILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSKPSHTVDAH--TAEV 152 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~h--~~~v 152 (437)
..+..|.+||+..++. ......+..+.|+|.++..|+..+.+ ..|.+||+... . ...+..+ ...+
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~-~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---N-VRKIKEHAEGESC 240 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---C-CEESSCCCTTEEE
T ss_pred CCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---c-eeEeeccCCCccc
Confidence 2345788888654332 23355688999999445555555543 35888888632 2 2222223 2358
Q ss_pred EEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEe-------------
Q psy4571 153 NCLSFNPYSEYILATGSAD-----KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG------------- 213 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~------------- 213 (437)
..++|+|+|++ |+.++.+ +.|.+||+.+++. . .+..... .. +.|+| +|+. ++.++
T Consensus 241 ~~~~~spdg~~-l~~~~~~~~~~~~~l~~~d~~~g~~-~-~l~~~~~-~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 241 THEFWIPDGSA-MAYVSYFKGQTDRVIYKANPETLEN-E-EVMVMPP-CS-HLMSNFDGSL-MVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEECTTSSC-EEEEEEETTTCCEEEEEECTTTCCE-E-EEEECCS-EE-EEEECSSSSE-EEEEECCC----------
T ss_pred cceEECCCCCE-EEEEecCCCCccceEEEEECCCCCe-E-EeeeCCC-CC-CCccCCCCce-EEEecCCcceeecccccc
Confidence 88999999997 5555433 4599999988653 2 2221222 33 89999 9984 65543
Q ss_pred ---CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc-----------cEEEEEEccCCCeEEEEEeCCCeEEEE-
Q psy4571 214 ---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-----------KISDFSWNPNEPWVICSVSEDNIMQEY- 278 (437)
Q Consensus 214 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~l~~~p~~~~~l~s~~~dg~i~iw- 278 (437)
.+..|++||+.++.... +..+.. .+..++|+|+|+.+++++..++...+|
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~---------------l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQK---------------LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCE---------------EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccCCCCcEEEEecccCceEE---------------ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 34789999998754211 222222 245678999999665555556655555
Q ss_pred -eCCCC
Q psy4571 279 -CDSTD 283 (437)
Q Consensus 279 -d~~~~ 283 (437)
|+.++
T Consensus 380 ~~~~~~ 385 (396)
T 3c5m_A 380 ADVPES 385 (396)
T ss_dssp EECCTT
T ss_pred EEEccc
Confidence 44444
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.37 E-value=2.7e-10 Score=103.70 Aligned_cols=231 Identities=11% Similarity=0.056 Sum_probs=144.7
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHES 117 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 117 (437)
....|+...+.++++...++.|..|+..++..... ..+..+.+++++| +++
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~----------------------------~~~~~~~~i~~~~-dG~ 66 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV----------------------------TMDAPVSSVALRQ-SGG 66 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE----------------------------ECSSCEEEEEEBT-TSS
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE----------------------------eCCCceEEEEECC-CCC
Confidence 44566633455666666666777777655443211 1234577899999 456
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeC---------CCeEEEEeCCCCceee
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSA---------DKTVALWDLRNLKLKL 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~---------dg~i~lwd~~~~~~~~ 186 (437)
+++ +. ++.|.+||.+++. .+.+..... ....+++++++|+|. ++++... ...-.||.+..... .
T Consensus 67 l~v-~~-~~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~ 141 (297)
T 3g4e_A 67 YVA-TI-GTKFCALNWKEQS-AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-V 141 (297)
T ss_dssp EEE-EE-TTEEEEEETTTTE-EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-E
T ss_pred EEE-EE-CCeEEEEECCCCc-EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-E
Confidence 554 44 5679999987431 111211111 123588999999998 4554422 12334554443222 2
Q ss_pred eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC--CCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS--KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+..+....+.++|+|+++.++++.+.++.|.+||+. ++.... .+.+..+..+......+++.++|.
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~---------~~~~~~~~~~~~~p~g~~~d~~G~- 211 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN---------RRSVYKLEKEEQIPDGMCIDAEGK- 211 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE---------EEEEEECCGGGCEEEEEEEBTTSC-
T ss_pred EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC---------cEEEEECCCCCCCCCeeEECCCCC-
Confidence 22333345568999999998767777778999999984 322110 122333444456788999999997
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccccC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTASES 315 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s~s 315 (437)
+.++...++.|..||..+++.+..+.. ....+.+++|. |+++.|...+
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEEeCCCCCEEEEEc
Confidence 777877888999999998887777754 23456778998 8888665554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-09 Score=97.71 Aligned_cols=265 Identities=6% Similarity=-0.089 Sum_probs=167.6
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...+.++++. +++.++++...++.+..++.. +....... +. ....+.++++.+
T Consensus 19 ~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~-~~------------------------~~~~~~~i~~~~ 71 (300)
T 2qc5_A 19 DSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEV-PT------------------------PDAKVMCLIVSS 71 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEEC-SS------------------------TTCCEEEEEECT
T ss_pred CCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEEC-CC------------------------CCCcceeEEECC
Confidence 4466778888 888888877777888888876 44332211 10 113466888888
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
++.++++...++.|..+|.. +. . ...........+.++++.+++. ++++...++.|..+|.. ++.....+....
T Consensus 72 -~g~l~v~~~~~~~v~~~d~~-g~-~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 145 (300)
T 2qc5_A 72 -LGDIWFTENGANKIGKLSKK-GG-F-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKG 145 (300)
T ss_dssp -TSCEEEEETTTTEEEEECTT-SC-E-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred -CCCEEEEecCCCeEEEECCC-CC-e-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCC
Confidence 56777766667889999876 21 1 1122222346789999999887 57776668899999987 443222233344
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..+..+++.++++ ++++...++.|..+|. .+... ......+...+.++++.++|. +.++...++
T Consensus 146 ~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~-------------~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~ 209 (300)
T 2qc5_A 146 SYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLE-------------EYPLPTNAAAPVGITSGNDGA-LWFVEIMGN 209 (300)
T ss_dssp CCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-------------EEECSSTTCCEEEEEECTTSS-EEEEETTTT
T ss_pred CCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEE-------------EeeCCCCCCCcceEEECCCCC-EEEEccCCC
Confidence 6789999999997 6777666788999988 32211 111223345688999999997 776776778
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh-hcCCCccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEES 352 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~~ 352 (437)
.|..||. +++.. .+... .....+..++++++|+++++...++. |..+|. +++.... +......+
T Consensus 210 ~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~-----------i~~~~~-~g~~~~~~~~~~~~~~ 274 (300)
T 2qc5_A 210 KIGRITT-TGEIS-EYDIP-TPNARPHAITAGKNSEIWFTEWGANQ-----------IGRITN-DNTIQEYQLQTENAEP 274 (300)
T ss_dssp EEEEECT-TCCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTE-----------EEEECT-TSCEEEEECCSTTCCC
T ss_pred EEEEEcC-CCcEE-EEECC-CCCCCceEEEECCCCCEEEeccCCCe-----------EEEECC-CCcEEEEECCccCCcc
Confidence 8999998 44322 22211 12344566788999997777655555 555665 3332211 12222345
Q ss_pred cccCCCCCCc
Q psy4571 353 SDRHSSDNDT 362 (437)
Q Consensus 353 ~~~~~~~~~~ 362 (437)
..+...++|.
T Consensus 275 ~~i~~~~~g~ 284 (300)
T 2qc5_A 275 HGITFGKDGS 284 (300)
T ss_dssp CCEEECTTSC
T ss_pred ceeEeCCCCC
Confidence 5556666665
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-11 Score=125.99 Aligned_cols=227 Identities=10% Similarity=-0.010 Sum_probs=137.7
Q ss_pred CcceEEeeCCCCCEEE-----EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFG-----SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~-----~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++|| .|+.+..|++||+.+++... ...+... ....++|+|||+. |+.++.|..
T Consensus 122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~--~~~~~~wspDg~~-l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGG--KYATPKWTPDSKG-FYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCC--TTCCCEECTTSSE-EEEEECCCCTTSCGG
T ss_pred EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcc--cccceEEecCCCE-EEEEEecCCCCCccc
Confidence 567899999 567776 33334689999998543210 1111111 1267999999996 888887766
Q ss_pred -------EEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEEeCC-C--eEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 174 -------VALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTD-R--RLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 174 -------i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g--~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
|++|++.++.. .+.....|...+..+.|+|+|++++++...+ + .|.+|+..++.
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~------------- 263 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD------------- 263 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-------------
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-------------
Confidence 99999998652 2223334556789999999999755444433 3 46666443321
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEe---CCCeEEEEeCCCCCC--ceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVS---EDNIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+..+..+...+....+ ++|. +++.+. .++.|.+||+.++.. ...+.... .......++++ ++.++++..
T Consensus 264 --~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 264 --FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp --CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEE
T ss_pred --eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEE
Confidence 1123334444555556 6777 666665 368999999987753 12222110 11223345666 677888887
Q ss_pred CCCcccccccccccccccccchhhhhhhhhcCC-CccccccCCCCCCcccc
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT-EEESSDRHSSDNDTEDL 365 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h-~~~~~~~~~~~~~~~~~ 365 (437)
.++... +.++|. +|+..+.+..+ ...+..+.+++++..+.
T Consensus 338 ~dg~~~---------l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 338 KDATSE---------VRVATL-KGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp ETTEEE---------EEEEET-TCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred ECCEEE---------EEEEeC-CCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 777632 223333 35555556554 55677778888887655
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-10 Score=118.53 Aligned_cols=229 Identities=9% Similarity=0.022 Sum_probs=135.5
Q ss_pred eeEEEEeeCCCcceEEEeecc-----CceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVIN-----EEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d-----~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.+..++|+ |++++|+.++.+ ..|++|+..++....... ....+..++
T Consensus 164 ~~~~~~~S-PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~---------------------------~~~~~~~~~ 215 (741)
T 1yr2_A 164 ALDAWAAS-DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL---------------------------KWVKFSGLA 215 (741)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE---------------------------EEEESCCCE
T ss_pred EEEeEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC---------------------------CCceeccEE
Confidence 45667777 777777766544 347777766655432110 001135789
Q ss_pred eeCCCCCEEEEEECCCc--------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----
Q psy4571 111 WHLLHESLFGSVADDQK--------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---- 171 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~--------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---- 171 (437)
|+| + +.|+.++.++. |++|++.++... ..+.....+...+..+.|+|||++ |+..+.+
T Consensus 216 wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~ 292 (741)
T 1yr2_A 216 WLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW-VVITSSEGTDP 292 (741)
T ss_dssp EST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE-EEEEEECTTCS
T ss_pred EEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE-EEEEEEccCCC
Confidence 999 4 66666666554 889998744211 122222233345889999999997 5444433
Q ss_pred -CeEEEEeCCCCcee-eeEeccCCCceEEEEEcCCCCcEEEEEeC---CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 -KTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGT---DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 -g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
..|.+||+.++... ...+..+...+.... +|+|+.+++.... ++.|.+||+.+.. . ......
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~----------~~~~l~ 359 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST--P----------RFDTVV 359 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS--C----------EEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc--c----------ccEEEe
Confidence 38999999875222 344545555555553 4888864444332 3459999987642 0 111223
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
..+...+..++|. +..++++...|+..++|.+. +++..+.+... ....+..+.++|++..++
T Consensus 360 ~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 360 PESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP--GIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp CCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCS--SSCEEEEEECCBTCSCEE
T ss_pred cCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCC--CCeEEEEeecCCCCCEEE
Confidence 3445557777776 44488899999988887654 34433333221 122344567889988666
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.33 E-value=4.4e-10 Score=102.76 Aligned_cols=216 Identities=8% Similarity=0.051 Sum_probs=135.4
Q ss_pred ecCceEEEEEeeeccccc--------cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe-eee-cc-CCCCe
Q psy4571 84 ILNISILFFEIIFTQNFP--------FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS-HTV-DA-HTAEV 152 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~~~--------~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~-~~-h~~~v 152 (437)
..++.|..|+...++... ....+.+++++++++.+++ ++..+.|.+||.+ +.. ..+ ... .. ....+
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTF-EEIAKKDSEGRRMQGC 119 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCE-EECCSBCTTSCBCBCC
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCE-EEEEeccCCCccccCC
Confidence 456778888754332211 2256889999994255554 4445578899986 321 111 100 11 12358
Q ss_pred EEEEEeCCCCcEEEEEeCC---------------CeEEEEeCCCCceeeeEeccCCCceEEEEEc----CCCCcEEEEEe
Q psy4571 153 NCLSFNPYSEYILATGSAD---------------KTVALWDLRNLKLKLHSFESHKDEIFQVQWS----PHNETILASSG 213 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~d---------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~----p~~~~~l~sg~ 213 (437)
.+++++++|. ++++...+ +.|..+|.. ++ ...+..+......++++ |+++.++++..
T Consensus 120 ~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 120 NDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred cCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 8999999997 46665544 567777765 33 22232334556889999 99976566666
Q ss_pred CCCeEEEEEcC-CCCCCCCCCCCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 214 TDRRLHVWDLS-KIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 214 ~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++.|.+||+. .+.... ...+..+.++. ..+..++++++|. ++++...++.|.+||.++++....+..
T Consensus 196 ~~~~i~~~~~~~~g~~~~---------~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIEN---------KKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp TTTEEEEEEEEETTEEEE---------EEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CCCeEEEEECCCCCcccc---------ceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 78999999986 221100 01222333443 5678899999998 777777889999999987776665543
Q ss_pred eecccCCceeeeecCCCCcc-cccCCCCc
Q psy4571 292 DSIRSNGGISSTASPTASST-ASESPTPT 319 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l-~s~s~d~~ 319 (437)
+...+..++++|+|+.| ++...++.
T Consensus 266 ---~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 266 ---PFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp ---SSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred ---CCCCceeEEECCCCCEEEEEeCCCCe
Confidence 23456677889999944 44444444
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.3e-10 Score=104.68 Aligned_cols=228 Identities=11% Similarity=0.024 Sum_probs=150.9
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCcee----------EEEecCCCCeEEEe-cCceEEEEEeeecc---ccccC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY----------DLVVNNYVANISCI-LNISILFFEIIFTQ---NFPFP 103 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~----------~~~~~~~~~~i~~~-~~~~i~~~~~~~~~---~~~~~ 103 (437)
..+++. .+.++++...++.+.+||..++.+. .+++++......+. .++.|.++|....+ .++..
T Consensus 47 ~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 47 QSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp EEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 445664 3556667777899999997765543 33343333222333 57889999865433 23333
Q ss_pred C------CcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----
Q psy4571 104 L------SRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----- 171 (437)
Q Consensus 104 ~------~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----- 171 (437)
. ....+++ . ++.++++.. .++.|.++|+.+ .+.+..+.. ......++++|+|+ +++++..+
T Consensus 125 ~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t---~~~~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 125 DMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET---DKVVDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSP 197 (328)
T ss_dssp TCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT---TEEEEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCS
T ss_pred CccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC---CeEEEEEEc-CCCccceEEcCCCC-EEEEECCCccCCc
Confidence 4 5677888 3 455555544 488999999984 444444443 23456889999998 46666554
Q ss_pred -----CeEEEEeCCCCceeeeEeccC-CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 172 -----KTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 172 -----g~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
+.|.++|.++++. ...+... ......++++|+++. +..+.. .|.+||..+++..... .
T Consensus 198 ~~~~~~~v~~id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~~------------~ 261 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTV-EKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVRP------------F 261 (328)
T ss_dssp SCBCCCEEEEEETTTTEE-EEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSSC------------S
T ss_pred cccCCceEEEEECCCCeE-EEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeeee------------e
Confidence 7899999998654 4444321 236799999999986 444433 8999999876542210 0
Q ss_pred ecCccccEEEEEEccCCCeEEEEE----eCCCeEEEEeCCCCCCceeeee
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSV----SEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
..........++++|++.+++++. ..++.|.+||.. ++.+..+..
T Consensus 262 ~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 111235688999999666588887 778999999998 888887764
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.32 E-value=8.1e-10 Score=105.20 Aligned_cols=202 Identities=6% Similarity=-0.054 Sum_probs=124.2
Q ss_pred EEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeee----ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 109 VAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTV----DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
++|+| +++.|+++..++ .|.+++.... .....+ ......+.+++++|++.. |+.+..++.|..||..+.
T Consensus 176 ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~---~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 176 PAVTK-DKQRVYSIGWEGTHTVYVYMKASG---WAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CEECT-TSSEEEEEBSSTTCEEEEEEGGGT---TCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTC
T ss_pred eeEec-CCCcEEEEecCCCceEEEEEcCCC---ceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCC
Confidence 89999 566777777665 7888888632 222222 214456789999996554 555777899999999875
Q ss_pred ceeeeE---eccCCCce--EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC-ceEEEecCccccEEEE
Q psy4571 183 KLKLHS---FESHKDEI--FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP-ELLFIHGGHTAKISDF 256 (437)
Q Consensus 183 ~~~~~~---~~~h~~~v--~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l 256 (437)
...+.. ..++...- ..++|+|++..++++...++.|+.|+..... ........... ..-......-.....+
T Consensus 251 ~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~--~~~~g~~~~~g~~dg~~~~~~~~~P~gi 328 (409)
T 3hrp_A 251 EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC--EWFCGSATQKTVQDGLREEALFAQPNGM 328 (409)
T ss_dssp CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE--EEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE--EEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence 532210 11222222 3899999755678787888999999876531 00000000000 0000000112347899
Q ss_pred EEccCCCeEEEEEe-CCCeEEEEeCCCCCCceeeeeeec------------ccCCceeeeecCCCCcccccCCCCc
Q psy4571 257 SWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTMRLDSI------------RSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 257 ~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+++|+|. ++++-. .++.|+.|++.++.. ..+..... .-..+..++++++|.++++...++.
T Consensus 329 a~d~dG~-lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 329 TVDEDGN-FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp EECTTCC-EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred EEeCCCC-EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 9999999 888888 899999999877642 22222100 0134566788999888887776665
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-09 Score=95.67 Aligned_cols=189 Identities=3% Similarity=-0.074 Sum_probs=126.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+.++++.| ++.++++...++.|.+||.. +. ........+...+.+++++++|. ++++...++.|..||. +++
T Consensus 99 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~-g~--~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 99 SAPYGITEGP-NGDIWFTEMNGNRIGRITDD-GK--IREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGD 172 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CC--EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCC
T ss_pred CCceeeEECC-CCCEEEEecCCceEEEECCC-CC--EEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCc
Confidence 3578899998 56777777678899999983 21 11112223455789999999987 5776667789999999 544
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
............+..+++.++|. ++++...++.|.+||. ++... ......+...+.++++.++|.
T Consensus 173 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~-------------~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 173 ITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEIT-------------EFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-------------EEECSSTTCCEEEEEECSTTC
T ss_pred EEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEE-------------EEECCCCCCCceeEEECCCCC
Confidence 32222333455688999999987 6767666889999998 43211 111233456789999999998
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
++++...++.|..||.. + ....+... .....+..+++ ++|.++++.+.++
T Consensus 238 -l~v~~~~~~~i~~~d~~-g-~~~~~~~~-~~~~~~~~i~~-~~g~l~v~~~~~~ 287 (299)
T 2z2n_A 238 -LWFTEWGANKIGRLTSN-N-IIEEYPIQ-IKSAEPHGICF-DGETIWFAMECDK 287 (299)
T ss_dssp -EEEEETTTTEEEEEETT-T-EEEEEECS-SSSCCEEEEEE-CSSCEEEEETTTE
T ss_pred -EEEeccCCceEEEECCC-C-ceEEEeCC-CCCCccceEEe-cCCCEEEEecCCc
Confidence 77676678899999983 3 23333221 12234556677 8888887765444
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-10 Score=106.16 Aligned_cols=224 Identities=9% Similarity=0.067 Sum_probs=146.6
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
..+..|+|.++.++++...++.|..||..+. . ...+ .....+.+++++|+|. ++++ . ++.|.+||.++++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---Q-VQRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTC---C-EEEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCC---c-EEEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcEE
Confidence 3578999976777888778899999999843 2 2222 3456799999999998 3544 4 568999999875531
Q ss_pred ee-Eecc--CCCceEEEEEcCCCCcEEEEEeCC---------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 186 LH-SFES--HKDEIFQVQWSPHNETILASSGTD---------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 186 ~~-~~~~--h~~~v~~v~~~p~~~~~l~sg~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
.. .... ....++.++++|+|+ ++++...+ ..-.+|.+..... +.....+....
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--------------~~~~~~~~~~p 151 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH--------------VKKYFDQVDIS 151 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC--------------EEEEEEEESBE
T ss_pred EEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC--------------EEEEeeccccc
Confidence 11 1111 123578999999998 45544221 2345555543211 11122233456
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeC--CCCCCce--eeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCD--STDSDTK--TMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.++|+|+++.++++.+.++.|.+||+ .++.... .+.........+-.++++++|.++++....+.
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~---------- 221 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR---------- 221 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE----------
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE----------
Confidence 889999999977778888899999997 4554321 11111111233455688999988777665555
Q ss_pred ccccccchhhhhhhhhcCCCccccccCCC-CCCcc
Q psy4571 330 GLVLFDILVCEEQRQLLGTEEESSDRHSS-DNDTE 363 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~~~h~~~~~~~~~~-~~~~~ 363 (437)
|..||..+|+.+..+..+...+.+++|. |++..
T Consensus 222 -v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 222 -VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp -EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred -EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 7889998999888887776677888886 66653
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.8e-10 Score=107.55 Aligned_cols=189 Identities=11% Similarity=-0.029 Sum_probs=125.0
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.++.++++ +...++++|+.|+ +++|+.....-.. .+...+ .......+++. |+.++| +
T Consensus 39 ~~nlLais-~~~gll~a~~~~~-l~v~~~~~l~~~~--~~~~~~--------------~~~~~~~~lp~-V~~l~f---d 96 (388)
T 1xip_A 39 SLQNLDIS-NSKSLFVAASGSK-AVVGELQLLRDHI--TSDSTP--------------LTFKWEKEIPD-VIFVCF---H 96 (388)
T ss_dssp CCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHHHHH--HSSSCC--------------CCCSEEEECTT-EEEEEE---E
T ss_pred cccEEEEc-CCCCEEEEeCCCE-EEEEEhhHhhhhh--cccccc--------------ccceEEeeCCC-eeEEEE---C
Confidence 57788888 7777888888775 4558743211000 000000 00001223556 899999 5
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+.+|+++ .++.|++||+.+ .........|..++.++.+.+. . +++++.||.|.+||+.++.. .. +...
T Consensus 97 ~~~L~v~-~~~~l~v~dv~s---l~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~-~~----~~~~ 164 (388)
T 1xip_A 97 GDQVLVS-TRNALYSLDLEE---LSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST-KQ----LAQN 164 (388)
T ss_dssp TTEEEEE-ESSEEEEEESSS---TTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE-EE----EEES
T ss_pred CCEEEEE-cCCcEEEEEchh---hhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc-cc----ccCC
Confidence 7888888 789999999984 3445556677888988877654 3 88899999999999997554 22 4568
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC--CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGE--EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
|+|++|+|+| ++.|..||++++|+...... ..... .+..+....+|...|.+|.|.+++.+++
T Consensus 165 Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~-----~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 165 VTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFS-----LPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp EEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEEC-----CCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred ceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceec-----CCcccccccCCCeeEEEEEEecCCeEEE
Confidence 9999999999 46788999999998876542 11100 0000000014778999999999998444
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.27 E-value=8.6e-09 Score=96.73 Aligned_cols=259 Identities=8% Similarity=-0.013 Sum_probs=158.3
Q ss_pred ceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc---ccccC--------CCc
Q psy4571 58 EYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ---NFPFP--------LSR 106 (437)
Q Consensus 58 ~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~---~~~~~--------~~v 106 (437)
+|.++|..++.+. .+.+++++..+.... ++.|.++|....+ .++.. ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 5666664433322 666777777775542 5678899865432 22222 235
Q ss_pred ceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 107 QDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..++|+| ++++|+++.. ++.|.++| . ..+.+.. +.. .+ ++.+.|++...+++.+.||.+.++|. +++
T Consensus 128 ~~~~~sp-DG~~l~v~n~~~~~~v~viD-~---t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 128 WMNANTP-NNADLLFFQFAAGPAVGLVV-Q---GGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred cceEECC-CCCEEEEEecCCCCeEEEEE-C---CCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 6899999 5667766653 57899999 7 4455555 432 22 35567777666888889999999999 755
Q ss_pred eeeeEec-----cCCCce-EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 184 LKLHSFE-----SHKDEI-FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 184 ~~~~~~~-----~h~~~v-~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
. ..... ....++ ....+.+++..+++.. .++.+.+.|+.......... ....... .....-.......+.
T Consensus 198 ~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~-~~~~~~~-~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 198 A-AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAP-IDALSGG-RKADTWRPGGWQQVA 273 (373)
T ss_pred E-EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeee-eeecCCc-ccccceecCceEeEE
Confidence 4 32211 111221 2345667666544443 67899999997543211000 0000000 000000122344578
Q ss_pred EccCCCeEEEEEe---------CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC-CCCcccccccc
Q psy4571 258 WNPNEPWVICSVS---------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES-PTPTNSVHEKN 326 (437)
Q Consensus 258 ~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s-~d~~~~~~~~~ 326 (437)
++|+++.++++.. .++.|.+.|+.+++.+..+.. ......++++|||+ .++++. .++.
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~----g~~p~~i~~s~Dg~~~l~v~~~~~~~------- 342 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAISVAQDGGPDLYALSAGTEV------- 342 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC----CCCcCeEEECCCCCeEEEEEcCCCCe-------
Confidence 9999986665543 246899999999988888764 23577889999999 677765 4666
Q ss_pred cccccccccchhhhhhhhh
Q psy4571 327 YWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~ 345 (437)
+.++|..+++.++.+
T Consensus 343 ----V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 343 ----LHIYDAGAGDQDQST 357 (373)
T ss_pred ----EEEEECCCCCEEeee
Confidence 899999999888763
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=8.1e-09 Score=95.21 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=118.0
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cC-CCCeEEEEEeCCCCcEEEEEeC------CCeE
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AH-TAEVNCLSFNPYSEYILATGSA------DKTV 174 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h-~~~v~~l~~~~~~~~~l~sgs~------dg~i 174 (437)
+..+.+++|+| ++.++++ +.+| |.+||..++.. ..+.... .. ...+.+++++|+|. ++++... .+.|
T Consensus 89 ~~~v~~i~~~~-dg~l~v~-~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 89 PFMGSALAKIS-DSKQLIA-SDDG-LFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SSCEEEEEEEE-TTEEEEE-ETTE-EEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEE
T ss_pred CCcceEEEEeC-CCeEEEE-ECCC-EEEEECCCCcE-EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEE
Confidence 34678899999 4656554 4444 89999874321 1111111 11 23589999999998 4554432 2456
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC--CC-CCCCCCCCCCCCCCceEEEecCccc
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS--KI-GEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
..++ +++ ...+..+......++|+|+++.++++.+.++.|.+||+. ++ .... .+.+..+.....
T Consensus 164 ~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~---------~~~~~~~~~~~~ 230 (326)
T 2ghs_A 164 YHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK---------AEVFIDSTGIKG 230 (326)
T ss_dssp EEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC---------CEEEEECTTSSS
T ss_pred EEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC---------ceEEEECCCCCC
Confidence 6666 333 233333334578999999998666666678899999986 33 2111 122223333445
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccccC
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTASES 315 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s~s 315 (437)
....+++.++|. +.++...++.|..||. +++....+.. ....+..++|+ |++..|..++
T Consensus 231 ~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i~~---~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 231 GMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARYEV---PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEEEC---SCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEEEC---CCCCcEEEEEecCCCCEEEEEe
Confidence 678899999998 6766667789999998 5655555543 23346677887 8887665443
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-09 Score=111.14 Aligned_cols=188 Identities=10% Similarity=0.074 Sum_probs=117.3
Q ss_pred ceEEeeCCCCCEEEEEECCC-------------cEEEEEcCCCCCC-CCeeeecc-CCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 107 QDVAWHLLHESLFGSVADDQ-------------KLMIWDTRSHNVS-KPSHTVDA-HTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg-------------~v~vwd~~~~~~~-~~~~~~~~-h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
..++|+ + ++.|+.++.+. .|++|++.+.... ..+..... |......+.|+|||++++++.+.+
T Consensus 178 ~~~~Ws-D-g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-G-NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-T-TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-C-CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 577899 5 45555666553 3999998754211 12222233 445678899999999866666543
Q ss_pred ---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 172 ---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 172 ---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
..|.++|+.++......+..+....... ++++|..+++....+ +.|..+|+.++.... ...
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~------------~~~ 322 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH------------WRD 322 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG------------CEE
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc------------cEE
Confidence 5899999987653355666666666555 667777666676554 579999998753211 122
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
+..|...+. .|+++++.++++...++ .|++||+..+ ....+... .......+.+++++..++..
T Consensus 323 l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p--~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 323 LIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALP--GLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp EECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCS--SSSEEEECCCCTTCSCEEEE
T ss_pred EecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecC--CCceEEeeecCCCCCEEEEE
Confidence 344544444 88999996666666665 6889998744 33333221 11223344667788766544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.4e-08 Score=88.53 Aligned_cols=186 Identities=5% Similarity=-0.025 Sum_probs=124.6
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe-eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+.++++.+ ++.++++...++.|..+|.. + +.. ..+......+.++++.+++. ++++...++.|..+|. ++
T Consensus 104 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 104 SGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-G---TIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp CCEEEEEECS-TTCEEEEETTTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TC
T ss_pred CCCccceECC-CCCEEEEccCCCeEEEECCC-C---CEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CC
Confidence 4578899998 56777776667889999876 2 211 12223445789999999988 5776666889999998 43
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+........+...+..+++.++|. ++++....+.|.+||.. +... ......+...+.++++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~~-------------~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 177 KLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GEIS-------------EYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CCEE-------------EEECSSTTCCEEEEEECSTT
T ss_pred cEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-CcEE-------------EEECCCCCCCceEEEECCCC
Confidence 432222223445689999999986 66666667789999983 2211 11122344568899999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
. +.++...++.|..+|.. ++ ...+.... ....+..++++++|.++++..
T Consensus 242 ~-l~v~~~~~~~i~~~~~~-g~-~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 242 E-IWFTEWGANQIGRITND-NT-IQEYQLQT-ENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp C-EEEEETTTTEEEEECTT-SC-EEEEECCS-TTCCCCCEEECTTSCEEEECS
T ss_pred C-EEEeccCCCeEEEECCC-Cc-EEEEECCc-cCCccceeEeCCCCCEEEEcc
Confidence 8 77777678999999983 42 23332221 223456678889998777665
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-09 Score=98.80 Aligned_cols=217 Identities=8% Similarity=-0.074 Sum_probs=137.2
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
...+|+|+++.++++...++.|..||..++ + ...+. ....+.+++|+|+|.. +++ +.+ .|.+||.++++.
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~~-~~~~v~~i~~~~dg~l-~v~-~~~-gl~~~d~~~g~~-- 121 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASG---R-KTVHA-LPFMGSALAKISDSKQ-LIA-SDD-GLFLRDTATGVL-- 121 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTT---E-EEEEE-CSSCEEEEEEEETTEE-EEE-ETT-EEEEEETTTCCE--
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCC---c-EEEEE-CCCcceEEEEeCCCeE-EEE-ECC-CEEEEECCCCcE--
Confidence 578899966777777778899999998732 2 22222 3467999999999873 544 444 499999987653
Q ss_pred eEeccC-----CCceEEEEEcCCCCcEEEEEeC------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 187 HSFESH-----KDEIFQVQWSPHNETILASSGT------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 187 ~~~~~h-----~~~v~~v~~~p~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
..+... ...+..++++|+|+ ++++... .+.|..++ .++. ..+..+......
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~---------------~~~~~~~~~~~~ 183 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKV---------------TKLFADISIPNS 183 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEE---------------EEEEEEESSEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcE---------------EEeeCCCcccCC
Confidence 222211 23588999999998 4554432 24455555 2211 111122335678
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCC--CC-CCc--eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDS--TD-SDT--KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++|+|+++.++++.+.++.|.+||+. ++ ... +.+.........+..++++++|.++++...++.
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~----------- 252 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA----------- 252 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-----------
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-----------
Confidence 99999998666676778999999986 55 322 122111111223345678888887776544444
Q ss_pred cccccchhhhhhhhhcCCCccccccCCC-CCCcc
Q psy4571 331 LVLFDILVCEEQRQLLGTEEESSDRHSS-DNDTE 363 (437)
Q Consensus 331 i~~wd~~~~~~~~~~~~h~~~~~~~~~~-~~~~~ 363 (437)
|..||. +++.+..+..+...+..+.+. +++..
T Consensus 253 v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 253 VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASR 285 (326)
T ss_dssp EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred EEEECC-CCCEEEEEECCCCCcEEEEEecCCCCE
Confidence 677887 566666666665567777776 66653
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.14 E-value=6.3e-09 Score=96.82 Aligned_cols=269 Identities=11% Similarity=0.008 Sum_probs=165.4
Q ss_pred CCcceEEEeec-----cCceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc-
Q psy4571 45 PFDDAVEERVI-----NEEYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ- 98 (437)
Q Consensus 45 ~~~~~l~tgs~-----d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~- 98 (437)
|++..++.... ++.|.+.|..+..+. .+.+++++..+.... ++.|.+||....+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v 121 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 121 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE
Confidence 66666555543 457777775443322 366677777663332 4679999865433
Q ss_pred --ccccC--------CCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 99 --NFPFP--------LSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 99 --~~~~~--------~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
.++.+ .....++|+| +++++.++.. ++.|.++|+. ..+.+..+.-. + |....|.+...++
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~---t~~vv~tI~v~-g---~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLE---GKAFKRMLDVP-D---CYHIFPTAPDTFF 193 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETT---TTEEEEEEECC-S---EEEEEEEETTEEE
T ss_pred EEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECC---CCcEEEEEECC-C---cceeecCCCceeE
Confidence 22222 2577899999 5666666653 6899999999 45566665321 1 1222354544578
Q ss_pred EEeCCCeEEEEeCCC-CceeeeEeccC----CCceE-EEEEc-CCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRN-LKLKLHSFESH----KDEIF-QVQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 167 sgs~dg~i~lwd~~~-~~~~~~~~~~h----~~~v~-~v~~~-p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+.+.||.+.+.++.+ ++. ......+ ..++. ...|. ++|+ +++ .+.+|.|.+.|+.+......
T Consensus 194 ~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~~v~-------- 262 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDAKFL-------- 262 (386)
T ss_dssp EEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEECTTSSCEEC--------
T ss_pred EECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEECCCCcceee--------
Confidence 889999999999986 332 2211111 12221 23554 6775 333 55689999999976542111
Q ss_pred CceEEEec------C-ccccEEEEEEccCCCeEEEEEeC---------CCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 240 PELLFIHG------G-HTAKISDFSWNPNEPWVICSVSE---------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 240 ~~~~~~~~------~-h~~~v~~l~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
..+..+. + .......++++|+++.++++... .+.|.+.|+.+++.+..+.... ....++
T Consensus 263 -~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~la 337 (386)
T 3sjl_D 263 -PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSIN 337 (386)
T ss_dssp -CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEE
T ss_pred -cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEE
Confidence 0000000 0 11222347778999866665432 2579999999999999888642 456789
Q ss_pred ecCCCC-cccc-cCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 304 ASPTAS-STAS-ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 304 ~s~~g~-~l~s-~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+++|++ .|++ ...++. +.++|..+++.++++..-
T Consensus 338 vs~D~~~~ly~tn~~~~~-----------VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 338 VSQDEKPLLYALSTGDKT-----------LYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ECSSSSCEEEEEETTTTE-----------EEEEETTTCCEEEEECCC
T ss_pred ECCCCCeEEEEEcCCCCe-----------EEEEECCCCcEEEEecCC
Confidence 999997 4544 455666 789999999988877443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-09 Score=102.89 Aligned_cols=209 Identities=8% Similarity=-0.039 Sum_probs=134.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC--eEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK--TVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg--~i~lwd~~~~ 182 (437)
....++|+| ++.++++...++.|++||+.+ ......... ..... ++|+|++.. |+++..++ .|.+++....
T Consensus 132 ~P~~la~d~-~g~lyv~d~~~~~I~~id~~~---g~~~~~~~~-~~~~~-ia~~~~g~~-l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVG-NNTVLAYQRDDPRVRLISVDD---NKVTTVHPG-FKGGK-PAVTKDKQR-VYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECS-TTEEEEEETTTTEEEEEETTT---TEEEEEEET-CCBCB-CEECTTSSE-EEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeC-CCCEEEEecCCCcEEEEECCC---CEEEEeecc-CCCCc-eeEecCCCc-EEEEecCCCceEEEEEcCCC
Confidence 567899998 567777777779999999973 222222222 23334 999999995 77777765 7999988764
Q ss_pred ceeeeEe----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE--ecCcccc--EE
Q psy4571 183 KLKLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTAK--IS 254 (437)
Q Consensus 183 ~~~~~~~----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~--v~ 254 (437)
.. ...+ ......+.+++++|++..+++ +..++.|+.||..+..... +.. ..++... ..
T Consensus 205 ~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~------------~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 205 WA-PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTL------------IKQLELSGSLGTNPGP 270 (409)
T ss_dssp TC-EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEE------------EEECCCCSCCCCSSCC
T ss_pred ce-eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEE------------EecccccCCCCCCccc
Confidence 43 2222 214466789999995554454 6778899999987653110 000 1111111 13
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee------------cccCCceeeeecCCCCcccccC-CCCccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS------------IRSNGGISSTASPTASSTASES-PTPTNS 321 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~~~~~~~s~~g~~l~s~s-~d~~~~ 321 (437)
.++|+|++..++++-..++.|+.|+.... ...+.... .....+..++++|+|.++++.+ .++.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-- 346 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-- 346 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE--
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE--
Confidence 89999976658888888999999997643 22222110 0012355678999999777776 6666
Q ss_pred ccccccccccccccchhhhhhhhhcCC
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.||..+|+. ..+.++
T Consensus 347 ---------I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 347 ---------LRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp ---------EEEEETTTTEE-EEEEEC
T ss_pred ---------EEEEECCCCEE-EEEeCC
Confidence 78888766653 444443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.1e-07 Score=87.22 Aligned_cols=232 Identities=8% Similarity=-0.052 Sum_probs=147.2
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCce------------------eEEEecCCCCeEEEe--c-Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFL------------------YDLVVNNYVANISCI--L-NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~------------------~~~~~~~~~~~i~~~--~-~~ 87 (437)
.++++ |+++.++... .++.|.++|..+..+ ..+.+++++..+.+. . ++
T Consensus 70 ~i~~s-pDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAA-HSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEEC-CCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 68899 9999888875 367899999655332 245677888777543 2 46
Q ss_pred eEEEEEeeecccccc-CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee--eeccCCCC-eEEEEEeCCCCc
Q psy4571 88 SILFFEIIFTQNFPF-PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAE-VNCLSFNPYSEY 163 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~h~~~-v~~l~~~~~~~~ 163 (437)
.|.++| ...+.... -..-.++.+.|.+...+++.+.||.+.++|. ++....... .......+ .....+.+++..
T Consensus 149 ~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 799999 76543322 1112356677766677888889999999999 442211110 00011122 233556777665
Q ss_pred EEEEEeCCCeEEEEeCCCCcee-eeEecc----------CCCceEEEEEcCCCCcEEEEEe---------CCCeEEEEEc
Q psy4571 164 ILATGSADKTVALWDLRNLKLK-LHSFES----------HKDEIFQVQWSPHNETILASSG---------TDRRLHVWDL 223 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~---------~dg~i~vwd~ 223 (437)
++++ +.++.+.+.|+...... ...+.. .......++++|+++.++++.. .++.|.++|+
T Consensus 227 ~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 227 IVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 3444 47889999999754321 112210 1233455889999987555543 2357999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCCCCCceee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 289 (437)
.+.+.... +.. .....+++|+|||+.+++++. .++.|.++|+.+++.+..+
T Consensus 306 ~t~~vv~~--------------i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 306 LVGQTSSQ--------------ISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCEEEEE--------------EEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 88644332 322 235789999999995555555 6899999999999877663
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-09 Score=110.21 Aligned_cols=227 Identities=11% Similarity=-0.010 Sum_probs=131.4
Q ss_pred CcceEEeeCCCCCEEEEEECC-C----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADD-Q----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d-g----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++||.+..+ | .|++||+.++ +.+.. ..+...+..++|+|| +. |+.++.|+.
T Consensus 164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg---~~~~~-~~~~~~~~~~~wspD-~~-l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADG---KPLAD-ELKWVKFSGLAWLGN-DA-LLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTC---CEEEE-EEEEEESCCCEESTT-SE-EEEEECCCC------
T ss_pred EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCC---CCCCc-cCCCceeccEEEECC-CE-EEEEEecCccccccc
Confidence 467899999 56777665543 3 5999999854 33322 111222357899999 86 666665543
Q ss_pred --------EEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEEeC----CCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 174 --------VALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 174 --------i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~----dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|.+|++.++.. .+.....+...+..+.|+|+|+++++++.. ...|++||+.++...
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--------- 307 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--------- 307 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC---------
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc---------
Confidence 89999987552 122222333458899999999975544432 347999999764111
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeC---CCeEEEEeCCCCC-CceeeeeeecccCCce-eeeecCCCCcccc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSE---DNIMQEYCDSTDS-DTKTMRLDSIRSNGGI-SSTASPTASSTAS 313 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~---dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~-~~~~s~~g~~l~s 313 (437)
....+..+...+... ++|+|+.+++.... ++.|.+||+.++. ....+.. +....+ .++++ ++.++++
T Consensus 308 ---~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~---~~~~~l~~~~~~-~~~lv~~ 379 (741)
T 1yr2_A 308 ---PVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP---ESKDNLESVGIA-GNRLFAS 379 (741)
T ss_dssp ---CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC---CCSSEEEEEEEE-BTEEEEE
T ss_pred ---ccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec---CCCCeEEEEEEE-CCEEEEE
Confidence 011122333333444 34888855544432 4569999998753 2222221 122222 34555 5567777
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhcC-CCccccccCCCCCCcccc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG-TEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-h~~~~~~~~~~~~~~~~~ 365 (437)
...++... +.++|. +|+..+.+.. +...+..+.+++++..+.
T Consensus 380 ~~~dg~~~---------l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 380 YIHDAKSQ---------VLAFDL-DGKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEETTEEE---------EEEEET-TSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred EEECCEEE---------EEEEeC-CCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 77776632 333343 3555555554 345567777888887554
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.3e-08 Score=96.37 Aligned_cols=234 Identities=14% Similarity=0.048 Sum_probs=136.4
Q ss_pred ceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEE---------CCCcEEEEEcCCCCCCCCeeeeccC------
Q psy4571 87 ISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVA---------DDQKLMIWDTRSHNVSKPSHTVDAH------ 148 (437)
Q Consensus 87 ~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~~~~h------ 148 (437)
+.|.+.|....+ .++..... .++++|++..++++-. .++.|.++|.. ..+.+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~---t~~vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV---TFLPIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT---TCCEEEEEEETTCCCCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC---CCcEEEEEECCCccccc
Confidence 456666643222 23333334 8999995444444432 46789999998 45555554311
Q ss_pred -CCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 149 -TAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 149 -~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
......+.++|||++ ++++.. ++.|.+.|+.+.+. +..+..- + +....|+++..+++.+.||++.+.+...
T Consensus 175 ~g~~P~~~~~spDGk~-lyV~n~~~~~~VsVID~~t~kv-v~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~ 248 (426)
T 3c75_H 175 VGTYQWMNALTPDNKN-LLFYQFSPAPAVGVVDLEGKTF-DRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFAD 248 (426)
T ss_dssp BSCCGGGSEECTTSSE-EEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCT
T ss_pred cCCCcceEEEcCCCCE-EEEEecCCCCeEEEEECCCCeE-EEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCC
Confidence 123457899999997 555553 68899999999665 5555421 1 1223344433444555555555555532
Q ss_pred CCCCC------CCCC------C--CCCCCce--------EEEecC--c---------------------cccEEEEEEcc
Q psy4571 226 IGEEQ------STED------A--EDGPPEL--------LFIHGG--H---------------------TAKISDFSWNP 260 (437)
Q Consensus 226 ~~~~~------~~~~------~--~~~~~~~--------~~~~~~--h---------------------~~~v~~l~~~p 260 (437)
++... .... . ....... +..... . ......++++|
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 22110 0000 0 0000000 000000 0 00111268899
Q ss_pred CCCeEEEEEe---------CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC-CCCccccccccccc
Q psy4571 261 NEPWVICSVS---------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES-PTPTNSVHEKNYWQ 329 (437)
Q Consensus 261 ~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s-~d~~~~~~~~~~~~ 329 (437)
++++++++.. .++.|.+.|..+.+.+..+.... .+..++++|||+ .+++.. .++.
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~---------- 394 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQT---------- 394 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTE----------
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCe----------
Confidence 9886676653 24579999999999998887633 466789999999 777665 4666
Q ss_pred ccccccchhhhhhhhh
Q psy4571 330 GLVLFDILVCEEQRQL 345 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~ 345 (437)
+.++|..+++.++++
T Consensus 395 -VsVID~~t~kvv~tI 409 (426)
T 3c75_H 395 -LHIYDAATGEELRSV 409 (426)
T ss_dssp -EEEEETTTCCEEEEE
T ss_pred -EEEEECCCCCEEEEe
Confidence 899999999988876
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.05 E-value=3.3e-08 Score=92.01 Aligned_cols=241 Identities=10% Similarity=-0.016 Sum_probs=153.0
Q ss_pred EEeeCCCcceEEEee----------ccCceEeeecCCCceeE------------------EEecCCCCeEEEe--c-Cce
Q psy4571 40 LCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYD------------------LVVNNYVANISCI--L-NIS 88 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~------------------~~~~~~~~~i~~~--~-~~~ 88 (437)
+.++ |+++.++.+. .++.|.+||..+..+.. +.+++++..+... . ++.
T Consensus 83 va~s-pDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 83 PVVA-DDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred EEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 8888 9999887765 36789999977655443 4566677766433 2 578
Q ss_pred EEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC----CCCeE-EEEEe-C
Q psy4571 89 ILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH----TAEVN-CLSFN-P 159 (437)
Q Consensus 89 i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h----~~~v~-~l~~~-~ 159 (437)
|.++|....+. ++.+. |....|.+...+++.+.||.+.+.++... .+.......+ ..++. ..+|. +
T Consensus 162 VsVID~~t~~vv~tI~v~g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~--g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD---CYHIFPTAPDTFFMHCRDGSLAKVAFGTE--GTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTSCEEEEECCSS--SCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEECCCCcEEEEEECCC---cceeecCCCceeEEECCCCCEEEEECCCC--CeEEEeecceeccccccccccceeEcC
Confidence 99999765443 22222 23344656677888899999999998742 2222111111 12221 24665 5
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCce-eeeEec----------cCCCceEEEEEcCCCCcEEEEEeC---------CCeEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKL-KLHSFE----------SHKDEIFQVQWSPHNETILASSGT---------DRRLH 219 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~----------~h~~~v~~v~~~p~~~~~l~sg~~---------dg~i~ 219 (437)
+|+ ++-.+.+|.|.+.|+.+... ....+. -..+....++++|+++.++++-.. .+.|.
T Consensus 237 dG~--~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~ 314 (386)
T 3sjl_D 237 AGR--LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 314 (386)
T ss_dssp TTE--EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCc--EEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEE
Confidence 665 33466689999999976432 111111 012344567889999876655431 25799
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
+.|+.+.+.... +.- ...+.+|+++||++ .++++...++.|.++|..+++.+.++... ..
T Consensus 315 viD~~t~kv~~~--------------i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~----~~ 375 (386)
T 3sjl_D 315 VLDAKTGERLAK--------------FEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL----GH 375 (386)
T ss_dssp EEETTTCCEEEE--------------EEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC----CS
T ss_pred EEECCCCeEEEE--------------EEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC----CC
Confidence 999998765433 211 23678999999996 45555667999999999999988888753 23
Q ss_pred ceeeeecCC
Q psy4571 299 GISSTASPT 307 (437)
Q Consensus 299 ~~~~~~s~~ 307 (437)
...+.+++|
T Consensus 376 p~~l~~s~d 384 (386)
T 3sjl_D 376 GPQVITTAD 384 (386)
T ss_dssp SCCEEEECC
T ss_pred CceeEECCc
Confidence 334555555
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.3e-09 Score=94.12 Aligned_cols=217 Identities=10% Similarity=0.032 Sum_probs=135.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
......|+|++..+++++..++.|..|+.. + . ...+..+...+..++++++|. ++++...++.|.+|+.+ ++.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g---~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G---T-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT-S---C-EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC-C---C-EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCC-CCE
Confidence 345789999544477788888999999874 2 2 344555667799999999998 56665566889999986 332
Q ss_pred eeeEeccC-----CCceEEEEEcCCCCcEEEE----EeC-------------CCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 185 KLHSFESH-----KDEIFQVQWSPHNETILAS----SGT-------------DRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 185 ~~~~~~~h-----~~~v~~v~~~p~~~~~l~s----g~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
..+..+ ...+..+++.|+|+ ++++ |.. .+.|..+|..++.. ..
T Consensus 119 --~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~------------~~ 183 (305)
T 3dr2_A 119 --HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL------------QR 183 (305)
T ss_dssp --EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC------------EE
T ss_pred --EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE------------EE
Confidence 222111 13467899999998 5665 321 24577777654321 11
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeC-----CCeEEEEeCCCCCCceeeee-eecccCCceeeeecCCCCcccccCC
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSE-----DNIMQEYCDSTDSDTKTMRL-DSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.. .......++|+|+++.++++.+. ++.|.+|++..+. +..... .......+-.++++++|+++++. .
T Consensus 184 ---~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~ 257 (305)
T 3dr2_A 184 ---MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-G 257 (305)
T ss_dssp ---EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-S
T ss_pred ---Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-C
Confidence 11 23456889999999955444443 2789999987654 211111 11112233456788888865554 3
Q ss_pred CCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
++ |.+||. .|+.+..+.... .+..+.+.+++..
T Consensus 258 ~g------------v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~ 290 (305)
T 3dr2_A 258 TG------------VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQR 290 (305)
T ss_dssp SE------------EEEECT-TSCEEEEEECSS-CCCEEEECTTSCE
T ss_pred Cc------------EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCE
Confidence 33 677877 566666665544 4666667777653
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.5e-09 Score=108.04 Aligned_cols=227 Identities=13% Similarity=0.082 Sum_probs=136.6
Q ss_pred CCcceEEeeCCCCCEEEE-EECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC------
Q psy4571 104 LSRQDVAWHLLHESLFGS-VADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK------ 172 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~-~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg------ 172 (437)
..+..++||| ++++||- .+.. ..|+++|+.++ +.+.. ..+......++|+ |++. |+.++.+.
T Consensus 129 ~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg---~~~~~-~~~~~k~~~~~Ws-Dg~~-l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 129 TALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESK---QPLET-PLKDVKFSGISWL-GNEG-FFYSSYDKPDGSEL 201 (693)
T ss_dssp CEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTC---SEEEE-EEEEEESCCCEEE-TTTE-EEEEESSCCC----
T ss_pred EEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCC---CCCcc-ccCCceeccEEEe-CCCE-EEEEEecCcccccc
Confidence 4677889999 5666663 3323 47999999854 32221 1111112567899 9996 66666663
Q ss_pred -------eEEEEeCCCCce---eeeEecc-CCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 173 -------TVALWDLRNLKL---KLHSFES-HKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 173 -------~i~lwd~~~~~~---~~~~~~~-h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
.|.+|++.+... .+..... |......+.|+|+|++++++.+.+ ..|+++|+.++...
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~--------- 272 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP--------- 272 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---------
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---------
Confidence 399999987543 1222233 445578899999999866666533 57999998765311
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCC--ceeeeeeecccCCceeeeecCCCCcccc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~s 313 (437)
+..+..+....... ++++|..+++....+ +.|..+|+.++.. .+.+.. +..... .+++++..|+.
T Consensus 273 ----~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 273 ----LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP---ERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp ----CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC---CCSSCE--EEEEETTEEEE
T ss_pred ----eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec---CCCCEE--EEEEECCEEEE
Confidence 12233444444444 677777676666554 6899999988754 233322 223333 89999988776
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhc-CCCccccccCCCCCCcccc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-GTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~h~~~~~~~~~~~~~~~~~ 365 (437)
...+.. ...+++||+..+. .+.+. .....+..+.+++++..+.
T Consensus 343 ~~~~~g--------~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 343 EYMVDA--------TARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp EEEETT--------EEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEE
T ss_pred EEEECC--------eeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEE
Confidence 653321 1227788876443 33332 2333455666777766543
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-11 Score=112.87 Aligned_cols=204 Identities=12% Similarity=-0.044 Sum_probs=108.5
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+..+++++.||.|+.||.. .++.+..+.. +.+.+..+..++. ++++++.||.|..||.++++. +..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~---tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR---TGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG-LTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT---TCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC-SEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECC---CCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce-eeeeeccCc
Confidence 46788899999999999998 4566655554 4555555666676 478888999999999988665 434432211
Q ss_pred -ceE-EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 195 -EIF-QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 195 -~v~-~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.+. +..+. .+. .+++|+.|+.|+.||..+++.... +..+. ...++|++. .+++++.|
T Consensus 81 ~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~--------------~~~~~----~~~~~p~~~-~v~~~~~d 139 (369)
T 2hz6_A 81 ELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQT--------------LSSAF----ADSLSPSTS-LLYLGRTE 139 (369)
T ss_dssp HHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------------------------EEEEEEE
T ss_pred cccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEE--------------ecCCC----cccccccCC-EEEEEecC
Confidence 110 00111 233 367788899999999998865443 22222 234567776 67788999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC---CcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
+.|+.||.++++....+.... ....++++++ ..++.++.++. +..||..+|+.+-...-..
T Consensus 140 g~v~a~d~~tG~~~W~~~~~~-----~~~~~~~~~~~~~~~v~~~~~dg~-----------v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 140 YTITMYDTKTRELRWNATYFD-----YAASLPEDDVDYKMSHFVSNGDGL-----------VVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp EEEECCCSSSSSCCCEEEEEE-----ECCBCCCCCTTCCCCEEEEETSCE-----------EEEECTTTCCEEEEEECSS
T ss_pred CEEEEEECCCCCEEEeEeccc-----ccCccccCCccccceEEEECCCCE-----------EEEEECCCCcEEEEecCCC
Confidence 999999999998877765422 1122333332 44556666776 6778887777654443222
Q ss_pred ccccccCCCCCCc
Q psy4571 350 EESSDRHSSDNDT 362 (437)
Q Consensus 350 ~~~~~~~~~~~~~ 362 (437)
..+....++++|.
T Consensus 204 pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 204 PVVAFYVWQREGL 216 (369)
T ss_dssp CEEEEEECTTSSC
T ss_pred ceEEEEEecCCce
Confidence 2222233445553
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.8e-08 Score=88.89 Aligned_cols=249 Identities=10% Similarity=-0.025 Sum_probs=146.2
Q ss_pred ceeEEEEeeCCCcceEEEeec--cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 35 YRFYRLCVAEPFDDAVEERVI--NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~--d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
..+..++++ ++++++++... ++.+++|....+.+. .+ +.... .....-..+..++++
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~-p~~~~-----------------~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI--PF-PPQSG-----------------NAIITFDTVLGIKSD 75 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE--ES-CCCCS-----------------SCCCCCSCEEEEEEC
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee--cC-CCccc-----------------CcccceeEeeEEEEc
Confidence 457778888 88988888642 233666665433221 11 11000 000123478899999
Q ss_pred CCCCCEEEEEEC-----CCcEEEEEcCCCCCCCCeeeecc------CCCCeEEEEEeCCCCcEEEEEe---CCCeEEEEe
Q psy4571 113 LLHESLFGSVAD-----DQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGS---ADKTVALWD 178 (437)
Q Consensus 113 p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~sgs---~dg~i~lwd 178 (437)
| ++.++++-.. ++.|.+||+.+ .+.+..+.. +...+..+++++++..++++.. .++.|.+||
T Consensus 76 ~-~g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 76 G-NGIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp S-SSEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred C-CCcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 9 4555554433 57899999984 333333322 2245689999987665566665 688999999
Q ss_pred CCCCceeeeEeccC-----------------------------CCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCC
Q psy4571 179 LRNLKLKLHSFESH-----------------------------KDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGE 228 (437)
Q Consensus 179 ~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~ 228 (437)
+.+++. ...+..| ...+..++|+|+++. |+.+..++ .+..++......
T Consensus 152 ~~~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 152 LQTGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSN 229 (343)
T ss_dssp TTTCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTC
T ss_pred CCCCCE-EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcC
Confidence 987553 3333221 123688999999986 55555444 565555421110
Q ss_pred CCCCCCCCCCCCceE--EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 229 EQSTEDAEDGPPELL--FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~--~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
... ...+.. ....++......++++++|. ++++...++.|.+||..+++. ..+.. ......+..+++.+
T Consensus 230 ~~~------~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~~-~~~~~-~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 230 LQL------TDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRAY-KLLVT-DEKLSWTDSFNFGS 300 (343)
T ss_dssp TTC------CHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTEE-EEEEE-CGGGSCEEEEEECT
T ss_pred CCC------ChhhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCCE-EEEEE-CCceecCCeeEECC
Confidence 000 000000 00113333456789999998 888888999999999855542 22221 11234466778999
Q ss_pred CCCcccccCCCCc
Q psy4571 307 TASSTASESPTPT 319 (437)
Q Consensus 307 ~g~~l~s~s~d~~ 319 (437)
+|+++++.+..+.
T Consensus 301 ~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 301 DGYLYFDCNQLHH 313 (343)
T ss_dssp TSCEEEEECCGGG
T ss_pred CCcEEEEeCcccc
Confidence 9988887765544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-07 Score=83.75 Aligned_cols=224 Identities=6% Similarity=0.039 Sum_probs=137.6
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|+|.++.++++-..++.|.++++... ...............++++|++.+++++-...+.|.+++++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 35689999965666666666789999998732 222222222346899999998776666666788999999875332
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEeC--CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSGT--DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.............++++|++.+++++... .+.|..+++..... ..+ ....-.....++++|++
T Consensus 114 -~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~------------~~~--~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 114 -RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR------------RIL--AQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp -EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC------------EEE--ECTTCSCEEEEEEETTT
T ss_pred -EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc------------EEE--EECCCCCCcEEEEcCCC
Confidence 11222222456899999976655555543 46888888764321 111 11222457899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.++.++....+.|..+|........... ....+..++.. .+.++++....+. |..+|..+|+.+
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~----~~~~P~gi~~d-~~~lyva~~~~~~-----------v~~~d~~~g~~~ 242 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLE----GLQYPFAVTSY-GKNLYYTDWKTNS-----------VIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEE----CCCSEEEEEEE-TTEEEEEETTTTE-----------EEEEETTTTEEE
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEec----CCCCceEEEEe-CCEEEEEECCCCe-----------EEEEeCCCCCce
Confidence 8677788888999999997543222111 11122333332 3334444333344 788888888887
Q ss_pred hhhcCCC-ccccccCCCCCCc
Q psy4571 343 RQLLGTE-EESSDRHSSDNDT 362 (437)
Q Consensus 343 ~~~~~h~-~~~~~~~~~~~~~ 362 (437)
..+.... .....+.+.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 7764332 2345555555543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.9e-08 Score=88.42 Aligned_cols=189 Identities=10% Similarity=-0.019 Sum_probs=114.8
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-eecc-CCCCeEEEEEeCCCCcEEEE----EeC--------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDA-HTAEVNCLSFNPYSEYILAT----GSA-------- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~-h~~~v~~l~~~~~~~~~l~s----gs~-------- 170 (437)
.+..++++| +++++++...++.|.+|+.+ + ....+. ...+ ....+.+++++|+|. ++++ |..
T Consensus 87 ~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g-~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 87 FTNGNAVDA-QQRLVHCEHGRRAITRSDAD-G-QAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTT-S-CEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCC
T ss_pred ccceeeECC-CCCEEEEECCCCEEEEECCC-C-CEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcccccccccc
Confidence 467899999 56666655556789999875 2 111111 1111 113467899999998 5665 332
Q ss_pred -----CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-----CCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 171 -----DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-----DRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 171 -----dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.+.|..+|..+++. ..+. .......++|+|+++.++++.+. ++.|.+|++.... ... .
T Consensus 163 ~~~~~~~~v~~~d~~~g~~--~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~--------~ 230 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPL--QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHD--------R 230 (305)
T ss_dssp CCSSSCEEEEEECSSSCCC--EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEE--------E
T ss_pred ccccCCCeEEEEcCCCCcE--EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccC--------C
Confidence 35678888766543 2222 33556889999999864444333 2789999987542 100 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+.+ ..........+++.++|+ +.++. .+ .|.+|+.. ++.+..+... ..+..++|+|+++.|..++.++.
T Consensus 231 ~~~--~~~~~~~pdgi~~d~~G~-lwv~~-~~-gv~~~~~~-g~~~~~~~~~----~~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 231 RHF--ASVPDGLPDGFCVDRGGW-LWSSS-GT-GVCVFDSD-GQLLGHIPTP----GTASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEE--ECCSSSCCCSEEECTTSC-EEECC-SS-EEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEEEETTEE
T ss_pred eEE--EECCCCCCCeEEECCCCC-EEEec-CC-cEEEECCC-CCEEEEEECC----CceeEEEEeCCCCEEEEEcCCeE
Confidence 111 111223345688999998 55443 44 49999984 5555555432 24677789999987777665543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.1e-08 Score=95.29 Aligned_cols=214 Identities=11% Similarity=-0.006 Sum_probs=126.6
Q ss_pred eEEeeCCCCCEEEEEE----------CCCcEEEEEcCCCCCCCCeeeeccC-------CCCeEEEEEeCCCCcEEEEEeC
Q psy4571 108 DVAWHLLHESLFGSVA----------DDQKLMIWDTRSHNVSKPSHTVDAH-------TAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~----------~dg~v~vwd~~~~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
.+.++|+ ++.++++. .++.|.+||+. ..+.+..+... ......++++|||++ ++++..
T Consensus 69 ~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~---T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~-lyVan~ 143 (368)
T 1mda_H 69 LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPV---TFLPIADIELPDAPRFSVGPRVHIIGNCASSAC-LLFFLF 143 (368)
T ss_dssp EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTT---TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC-EEEEEC
T ss_pred ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECC---CCCEEEEEECCCccccccCCCcceEEEcCCCCE-EEEEcc
Confidence 7999995 44444454 36889999999 55666665432 123567999999997 666554
Q ss_pred --CCeEEE--EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-----CCCCCCC---CCCCCC
Q psy4571 171 --DKTVAL--WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK-----IGEEQST---EDAEDG 238 (437)
Q Consensus 171 --dg~i~l--wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-----~~~~~~~---~~~~~~ 238 (437)
+..+.+ +|+.+ +..+.. .+. ..+.|+++..+++.+.|+.+.+.|+.. ++..... ......
T Consensus 144 ~~~~~v~V~~iD~~t----v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~ 215 (368)
T 1mda_H 144 GSSAAAGLSVPGASD----DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQ 215 (368)
T ss_dssp SSSCEEEEEETTTEE----EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSC
T ss_pred CCCCeEEEEEEchhh----ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCC
Confidence 467888 99876 222221 111 223355544455556666666666654 1111000 000000
Q ss_pred C------Cc-------eEEEec--C------------------cc---ccEEEEEEccCCCeEEEEEe---C-----CCe
Q psy4571 239 P------PE-------LLFIHG--G------------------HT---AKISDFSWNPNEPWVICSVS---E-----DNI 274 (437)
Q Consensus 239 ~------~~-------~~~~~~--~------------------h~---~~v~~l~~~p~~~~~l~s~~---~-----dg~ 274 (437)
| .. .+.... + +. .....++++|++++++++.. . ++.
T Consensus 216 P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 216 AAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp CEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred ccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 0 00 000000 0 00 00111679999997766554 2 235
Q ss_pred EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc-ccccC-CCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS-TASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
+.++|+.+.+.+..+.... .+..++++|||+. +++.. .++. +.++|+.+++.++++..+.
T Consensus 296 ~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~-----------VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEV-----------LDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTE-----------EEEEESSSCEEEEECCCCS
T ss_pred EEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCe-----------EEEEECCCCcEEEEEECCC
Confidence 6699999999888887643 4677899999985 44444 4666 8999999999888886554
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.87 E-value=2e-07 Score=87.46 Aligned_cols=227 Identities=12% Similarity=0.083 Sum_probs=136.4
Q ss_pred EEecCceEEEEEeeeccc-ccc-------------C-CCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCC
Q psy4571 82 SCILNISILFFEIIFTQN-FPF-------------P-LSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSK 140 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~-~~~-------------~-~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~ 140 (437)
.+..++.|.++|...... ... . .....+...| ++ +++++..+ |.|.++|.+ +.+
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~---T~~ 175 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHY---SFE 175 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTT---TCC
T ss_pred ccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECC---CCe
Confidence 555678899999753311 100 0 1234567788 45 77666655 789999998 455
Q ss_pred CeeeeccC--C-CCeEEEEEeCCCCcEEEEEe-------------------CCCeEEEEeCCCCceeeeEeccC--CCce
Q psy4571 141 PSHTVDAH--T-AEVNCLSFNPYSEYILATGS-------------------ADKTVALWDLRNLKLKLHSFESH--KDEI 196 (437)
Q Consensus 141 ~~~~~~~h--~-~~v~~l~~~~~~~~~l~sgs-------------------~dg~i~lwd~~~~~~~~~~~~~h--~~~v 196 (437)
.+..+... . .--..+.|+|+++. +++.. .+.+|.+||+.+.+. +.++..- ....
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg~~g~~P 253 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLGEENRMA 253 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESCTTEEEE
T ss_pred EEEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecCCCCCcc
Confidence 56555422 1 22346888999994 77764 378999999998543 5555431 1234
Q ss_pred EEEEE--cCCCCcEEEEEe-----CCCeEEEEEcCCCCCCCCCCC-CCCCCC-ceEE----EecCccccEEEEEEccCCC
Q psy4571 197 FQVQW--SPHNETILASSG-----TDRRLHVWDLSKIGEEQSTED-AEDGPP-ELLF----IHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 197 ~~v~~--~p~~~~~l~sg~-----~dg~i~vwd~~~~~~~~~~~~-~~~~~~-~~~~----~~~~h~~~v~~l~~~p~~~ 263 (437)
..+.| +|++++.++++- .+++|.+|....+........ ....+. ..+. .+.+-......|.++|||+
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 56666 999998777776 788898877654211000000 000000 0000 0000023467899999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCC---ceeeeeeec-----------ccCCceeeeecCCCCcccccC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSD---TKTMRLDSI-----------RSNGGISSTASPTASSTASES 315 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~-----------~~~~~~~~~~s~~g~~l~s~s 315 (437)
++.++.-..+.|.++|+..... +..+..... ...++..+.++|||++|.++.
T Consensus 334 fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 334 FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8888888899999999864322 223322100 011467789999999888776
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.84 E-value=9.8e-06 Score=71.96 Aligned_cols=182 Identities=7% Similarity=-0.004 Sum_probs=115.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~ 182 (437)
....++++|.++.++++-...+.|.+++++.. ...............++++|++.+++++... .+.|..++++..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCC---CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 56789999965666666666789999998732 1111222222467899999977764444433 468888888753
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .............++++|++.+++++-...+.|.++|+...... ....+ ......++. ++
T Consensus 157 ~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~--------------~~~~~-~~~P~gi~~--d~ 218 (267)
T 1npe_A 157 NR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR--------------KVLEG-LQYPFAVTS--YG 218 (267)
T ss_dssp CC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE--------------EEEEC-CCSEEEEEE--ET
T ss_pred Cc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE--------------EEecC-CCCceEEEE--eC
Confidence 22 11121223457899999988777777777889999998753211 11111 123355655 45
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS 309 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 309 (437)
.+++++...++.|..+|..+++.+..+.... ...+..+++.|++.
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~--~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISKEMDTFHPHK--QTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEECCSS--CCCCCCEEEECSCC
T ss_pred CEEEEEECCCCeEEEEeCCCCCceEEEcccc--ccccceeeecCccC
Confidence 5577777778999999999887776665321 11345566677654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.7e-10 Score=104.33 Aligned_cols=188 Identities=11% Similarity=0.011 Sum_probs=98.3
Q ss_pred CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC
Q psy4571 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD 125 (437)
Q Consensus 46 ~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 125 (437)
.+.++++++.|+.+..||..++.+.-.... . .+.+..+.+ ++.++++++.|
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~--------------------------~~~s~p~~~-~g~~~v~~s~d 58 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D--------------------------PVLQVPTHV-EEPAFLPDPND 58 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--C--------------------------CSCCCC------CCEEECTTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--C--------------------------CceecceEc-CCCEEEEeCCC
Confidence 467889999999999999877765422211 1 111222333 45567777899
Q ss_pred CcEEEEEcCCCCCCCCeeeeccCCC-CeE-EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAHTA-EVN-CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h~~-~v~-~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
|.|+.||.+++ +.+.....+.. .+. +..+. .+. .+++|+.|+.|..||.++++. +..+..+. ...++|
T Consensus 59 g~l~a~d~~tG---~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p 128 (369)
T 2hz6_A 59 GSLYTLGSKNN---EGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSP 128 (369)
T ss_dssp CCEEEC--------CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------
T ss_pred CEEEEEECCCC---ceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccc
Confidence 99999999743 33333322210 000 00111 234 378888999999999999776 55554332 245567
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC---CeEEEEEeCCCeEEEEeC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE---PWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~~~l~s~~~dg~i~iwd~ 280 (437)
++. .+++++.|+.|+.||.++++.... +..+ ......+.++. . .++.++.||.++.||.
T Consensus 129 ~~~-~v~~~~~dg~v~a~d~~tG~~~W~--------------~~~~--~~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 129 STS-LLYLGRTEYTITMYDTKTRELRWN--------------ATYF--DYAASLPEDDVDYKM-SHFVSNGDGLVVTVDS 190 (369)
T ss_dssp -----EEEEEEEEEEECCCSSSSSCCCE--------------EEEE--EECCBCCCCCTTCCC-CEEEEETSCEEEEECT
T ss_pred cCC-EEEEEecCCEEEEEECCCCCEEEe--------------Eecc--cccCccccCCccccc-eEEEECCCCEEEEEEC
Confidence 776 477888899999999998765433 1111 11222333331 3 3567889999999999
Q ss_pred CCCCCceeee
Q psy4571 281 STDSDTKTMR 290 (437)
Q Consensus 281 ~~~~~~~~~~ 290 (437)
++++.+....
T Consensus 191 ~tG~~~W~~~ 200 (369)
T 2hz6_A 191 ESGDVLWIQN 200 (369)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 9998766554
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.82 E-value=7e-08 Score=89.54 Aligned_cols=241 Identities=8% Similarity=0.004 Sum_probs=134.1
Q ss_pred CCcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCe----eeeccCCCCeEEEEEeCCCCcEEEEEeC-----CC
Q psy4571 104 LSRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPS----HTVDAHTAEVNCLSFNPYSEYILATGSA-----DK 172 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~----~~~~~h~~~v~~l~~~~~~~~~l~sgs~-----dg 172 (437)
..+..++++| +++++++.. .++.++||.+.++ ..... .....|...+..+++++++. ++++-.. ++
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 4677899999 577877753 2343555555421 10000 01123556899999999986 4555433 57
Q ss_pred eEEEEeCCCCceeeeEecc------CCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEcCCCCCCCCCCCC-CCCCCce
Q psy4571 173 TVALWDLRNLKLKLHSFES------HKDEIFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDA-EDGPPEL 242 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 242 (437)
.|.+||+.+++. +..+.. +...+..++++|++..++++.. .++.|.+||+.++......... ...+...
T Consensus 94 ~i~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 899999998663 333321 2235689999987655667765 6789999999876533221110 0000000
Q ss_pred EEEecC--------------ccccEEEEEEccCCCeEEEEEeCC-CeEEEEeCC---CCCC-----ceeeeeeecccCCc
Q psy4571 243 LFIHGG--------------HTAKISDFSWNPNEPWVICSVSED-NIMQEYCDS---TDSD-----TKTMRLDSIRSNGG 299 (437)
Q Consensus 243 ~~~~~~--------------h~~~v~~l~~~p~~~~~l~s~~~d-g~i~iwd~~---~~~~-----~~~~~~~~~~~~~~ 299 (437)
.....+ ....+..|+|+|+|+. |+.+..+ ..+..++.. .+.. ...+... ......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~p 250 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPIC 250 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCC
Confidence 000111 0124688999999984 4455444 455555532 1110 0011110 011234
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC--CccccccCCCCCCc
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT--EEESSDRHSSDNDT 362 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h--~~~~~~~~~~~~~~ 362 (437)
-.++++++|.++++...++. |.+||..+|+.. .+... ......+++.++|.
T Consensus 251 dgia~d~~G~l~va~~~~~~-----------V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSA-----------IGVITSADRAYK-LLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTE-----------EEEEETTTTEEE-EEEECGGGSCEEEEEECTTSC
T ss_pred ceEEECCCCCEEEEccCCCe-----------EEEEECCCCCEE-EEEECCceecCCeeEECCCCc
Confidence 45788999998888777666 778887555432 22211 22355666777665
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.79 E-value=3.1e-07 Score=93.06 Aligned_cols=174 Identities=8% Similarity=0.051 Sum_probs=109.7
Q ss_pred EEEEeCCCCcEEEEEeCCC-------------------eEEEEeCCCCceeeeEecc--CC-------CceEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADK-------------------TVALWDLRNLKLKLHSFES--HK-------DEIFQVQWSPHN 205 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg-------------------~i~lwd~~~~~~~~~~~~~--h~-------~~v~~v~~~p~~ 205 (437)
.++++|++. +++.++.++ +|..+|.++++. +..+.. |. .....+....+|
T Consensus 247 ~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~-~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 247 SMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY-KWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE-EEEEecCCCcccccccCCCcEEEecccCC
Confidence 578889888 477777664 599999999776 444332 21 122333444466
Q ss_pred C--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC-------CCCceEE------------Eec---CccccEEEEEEccC
Q psy4571 206 E--TILASSGTDRRLHVWDLSKIGEEQSTEDAED-------GPPELLF------------IHG---GHTAKISDFSWNPN 261 (437)
Q Consensus 206 ~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~------------~~~---~h~~~v~~l~~~p~ 261 (437)
+ ..++.++.+|.++++|..+++.......... .....+. .+. +... -..++++|+
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~-w~~~a~dp~ 403 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN-WHPMSFNPQ 403 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC-SSCCEEETT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC-CCCceEcCC
Confidence 2 3688999999999999999876433211100 0000000 000 0000 125788998
Q ss_pred CCeEEEEEeC-------------------------------------------CCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 262 EPWVICSVSE-------------------------------------------DNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 262 ~~~~l~s~~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
+. +++.... .|.|..||+.+++.+..+... ..
T Consensus 404 ~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~ 478 (677)
T 1kb0_A 404 TG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV----SP 478 (677)
T ss_dssp TT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES----SS
T ss_pred CC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC----CC
Confidence 88 5545432 278999999999877666532 22
Q ss_pred ceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 299 GISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.....++.++..++.++.++. +++||..+|+++..+.
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~-----------l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGR-----------LVAYHAATGEKLWEAP 515 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEE
T ss_pred CcCcceEeCCCEEEEECCCCc-----------EEEEECCCCceeeeee
Confidence 333456677888888888888 7889999998887774
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-06 Score=82.75 Aligned_cols=228 Identities=10% Similarity=0.011 Sum_probs=144.9
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCceeE------------------EEecCCCCeEEEe--c-Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYD------------------LVVNNYVANISCI--L-NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~------------------~~~~~~~~~i~~~--~-~~ 87 (437)
.+.++ |+++.++.+. .++.|.++|..+..+.. +.+++++..+... . ++
T Consensus 122 gia~S-pDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAA-EDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC
T ss_pred ceEEC-CCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC
Confidence 58888 9998887775 46789999977665543 3445566666433 2 46
Q ss_pred eEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee----eccCCCCe-EEEEEeC
Q psy4571 88 SILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT----VDAHTAEV-NCLSFNP 159 (437)
Q Consensus 88 ~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~----~~~h~~~v-~~l~~~~ 159 (437)
.|.+.|....+. ++.+. +....|.+...+++.+.||.+.+.+..+ .+.... +.....++ ..+.+.+
T Consensus 201 ~VsVID~~t~kvv~~I~v~g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~---~~v~~~~~~~~~v~~~p~~~~~~~~~ 274 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPD---CYHIFPASPTVFYMNCRDGSLARVDFAD---GETKVTNTEVFHTEDELLINHPAFSL 274 (426)
T ss_dssp EEEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTSSEEEEECCT---TCCEEEECCCCSCTTSCBCSCCEECT
T ss_pred eEEEEECCCCeEEEEEEcCC---ceeeccCCCcEEEEEcCCCCEEEEECCC---CcEEEEeeeeeccCCCceeeEeeecC
Confidence 788888655432 22222 2345565557777788899988888842 232211 11111121 2356789
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceee-eEec----------cCCCceEEEEEcCCCCcEEEEEe---------CCCeEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKL-HSFE----------SHKDEIFQVQWSPHNETILASSG---------TDRRLH 219 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~----------~h~~~v~~v~~~p~~~~~l~sg~---------~dg~i~ 219 (437)
++.. ++..+..+.|.+.|+......+ ..+. ........++++|++++++++.. .++.|.
T Consensus 275 dg~~-~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 275 RSGR-LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp TTCE-EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCCE-EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEE
Confidence 9886 5555678999999987533211 1110 01112223789999987666543 135799
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
+.|+.+.+.... +.. .....+++|+|+|+ .++++...++.|.++|+.+++.++.+
T Consensus 354 VID~~T~kvv~~--------------I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINK--------------IEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEE--------------EEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEE--------------EEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999998754433 221 22578899999998 55555557999999999999888776
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.3e-07 Score=92.27 Aligned_cols=294 Identities=7% Similarity=0.011 Sum_probs=164.4
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC--------------------CCCeE-EEecCceEEEEEeeecccc---cc
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN--------------------YVANI-SCILNISILFFEIIFTQNF---PF 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~--------------------~~~~i-~~~~~~~i~~~~~~~~~~~---~~ 102 (437)
+..++.++.++.+..+|..++...=..-.. ....+ ....++.+..+|...++.. ..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 556777777888888887665533221100 11223 3345778888886655432 11
Q ss_pred C---CCcceEEeeC--CCCCEEEEEE------CCCcEEEEEcCCCCCCCCeeeecc------------------------
Q psy4571 103 P---LSRQDVAWHL--LHESLFGSVA------DDQKLMIWDTRSHNVSKPSHTVDA------------------------ 147 (437)
Q Consensus 103 ~---~~v~~~~~sp--~~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~~~~~------------------------ 147 (437)
. .....+..+| .++ .++++. .+|.|+.||..++ +.+..+..
T Consensus 150 ~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETG---KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp CSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTC---CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred cCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCC---cEEEEecccCCCcccccccccccccccccCCc
Confidence 1 0001111122 133 444443 3689999999844 44433321
Q ss_pred -------CCCCeEEEEEeCCCCcEEEEEeCCCe-------------------EEEEeCCCCceeeeEecc--CC------
Q psy4571 148 -------HTAEVNCLSFNPYSEYILATGSADKT-------------------VALWDLRNLKLKLHSFES--HK------ 193 (437)
Q Consensus 148 -------h~~~v~~l~~~~~~~~~l~sgs~dg~-------------------i~lwd~~~~~~~~~~~~~--h~------ 193 (437)
+...-..++++|++. +++.++.++. |..+|.++++. +..+.. |.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDAWDYTA 303 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCCSCCCC
T ss_pred eeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCcccccccC
Confidence 001112578888877 5888887764 99999999876 444432 21
Q ss_pred -CceEEEEEcCCCC--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--------CCCceE---------------EEec
Q psy4571 194 -DEIFQVQWSPHNE--TILASSGTDRRLHVWDLSKIGEEQSTEDAED--------GPPELL---------------FIHG 247 (437)
Q Consensus 194 -~~v~~v~~~p~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~---------------~~~~ 247 (437)
.+........+|+ ..++.++.+|.++++|.++++.......... .....+ ....
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 2222223333443 2578899999999999999876422111000 000000 0000
Q ss_pred ---CccccEEEEEEccCCCeEEEEEeC---------------------------------------------CCeEEEEe
Q psy4571 248 ---GHTAKISDFSWNPNEPWVICSVSE---------------------------------------------DNIMQEYC 279 (437)
Q Consensus 248 ---~h~~~v~~l~~~p~~~~~l~s~~~---------------------------------------------dg~i~iwd 279 (437)
+.. ....++++|+.. +++.... +|.|+.||
T Consensus 384 ~~~Gg~-~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D 461 (689)
T 1yiq_A 384 AFWGAH-DWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWD 461 (689)
T ss_dssp CTTCSS-CSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEE
T ss_pred Cccccc-CCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEE
Confidence 000 112378888877 5544421 47899999
Q ss_pred CCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc-cccccCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE-ESSDRHSS 358 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~-~~~~~~~~ 358 (437)
+.+++....+.... ......++..|.+++.++.|+. ++.||..+|+++-.+..... ....+.+.
T Consensus 462 ~~tG~~~W~~~~~~----~~~~g~~~tagglvf~gt~dg~-----------l~a~D~~tG~~lw~~~~~~~~~~~p~ty~ 526 (689)
T 1yiq_A 462 PVKQQAAWEVPYVT----IFNGGTLSTAGNLVFEGSADGR-----------VIAYAADTGEKLWEQPAASGVMAAPVTYS 526 (689)
T ss_dssp TTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CCCCCeEeEccCCC----CccCccceECCCEEEEECCCCc-----------EEEEECCCCccceeeeCCCCcccCceEEE
Confidence 99998777665422 2222356677888999999988 89999999998876643322 12223334
Q ss_pred CCCcc
Q psy4571 359 DNDTE 363 (437)
Q Consensus 359 ~~~~~ 363 (437)
.+|+.
T Consensus 527 ~~G~q 531 (689)
T 1yiq_A 527 VDGEQ 531 (689)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 55553
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.77 E-value=8e-08 Score=90.15 Aligned_cols=230 Identities=12% Similarity=0.057 Sum_probs=137.3
Q ss_pred eEEee--CCCCCEEEEEECCCcEEEEEcCCCC-CCCCeeeec------c-CCCCeEEEEEeCCCCcEEEEEeCC------
Q psy4571 108 DVAWH--LLHESLFGSVADDQKLMIWDTRSHN-VSKPSHTVD------A-HTAEVNCLSFNPYSEYILATGSAD------ 171 (437)
Q Consensus 108 ~~~~s--p~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~------~-h~~~v~~l~~~~~~~~~l~sgs~d------ 171 (437)
+..++ ++...+++.+..++.|.|+|+.+.. ..+..+.+. . .......+...|+| +++++..+
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~ 163 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGP 163 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSC
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCC
Confidence 34456 6555567777888999999997432 223334431 0 11244567788998 46666655
Q ss_pred CeEEEEeCCCCceeeeEeccCC---CceEEEEEcCCCCcEEEEEe-------------------CCCeEEEEEcCCCCCC
Q psy4571 172 KTVALWDLRNLKLKLHSFESHK---DEIFQVQWSPHNETILASSG-------------------TDRRLHVWDLSKIGEE 229 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~l~sg~-------------------~dg~i~vwd~~~~~~~ 229 (437)
|.|.+.|.++.+. +..+..-. .--+.+.|+|+++. +++.. .+.+|.+||+.+.+..
T Consensus 164 g~v~vlD~~T~~v-~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 164 GGILMLDHYSFEP-LGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp CEEEEECTTTCCE-EEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CeEEEEECCCCeE-EEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 7899999998665 55554221 22456888999984 66653 3689999999875322
Q ss_pred CCCCCCCCCCCceEEEecC--ccccEEEEEE--ccCCCeEEEEEe-----CCCeEEEEeCCCCCC--ceeeeeeec----
Q psy4571 230 QSTEDAEDGPPELLFIHGG--HTAKISDFSW--NPNEPWVICSVS-----EDNIMQEYCDSTDSD--TKTMRLDSI---- 294 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~p~~~~~l~s~~-----~dg~i~iwd~~~~~~--~~~~~~~~~---- 294 (437)
+ ++.- .......+.| +|++++.++++. .+++|.+|....++. .+.+.....
T Consensus 242 ~--------------tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~ 307 (462)
T 2ece_A 242 H--------------SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG 307 (462)
T ss_dssp E--------------EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS
T ss_pred e--------------EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc
Confidence 2 2221 1234456666 999997777777 888998877654321 111111110
Q ss_pred -----c------cCCceeeeecCCCCcccccCC-CCcccccccccccccccccchh---hhhhhhhcCC-C---------
Q psy4571 295 -----R------SNGGISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILV---CEEQRQLLGT-E--------- 349 (437)
Q Consensus 295 -----~------~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~---~~~~~~~~~h-~--------- 349 (437)
. ......+.+||||++|.++.. .+. |.++|+.. .+.+..+.-. .
T Consensus 308 ~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~-----------VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G 376 (462)
T 2ece_A 308 NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE-----------VRQYDISNPFKPVLTGKVKLGGIFHRADHPAG 376 (462)
T ss_dssp SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE-----------EEEEECSSTTSCEEEEEEECBTTTTCBCCTTS
T ss_pred cccccccccccCCCceeEEEECCCCCEEEEEeCCCCE-----------EEEEEecCCCCcEEEEEEEeCCeecccccccc
Confidence 0 133555689999998876643 334 66666642 2333333111 0
Q ss_pred ----ccccccCCCCCCccccc
Q psy4571 350 ----EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 350 ----~~~~~~~~~~~~~~~~~ 366 (437)
.....+.++|+|+.+..
T Consensus 377 ~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 377 HKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp CCCCSCCCCEEECTTSSEEEE
T ss_pred ccCCCCCCEEEEcCCCCEEEE
Confidence 12456678888875544
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=2e-07 Score=86.68 Aligned_cols=228 Identities=8% Similarity=-0.069 Sum_probs=142.7
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCceeEE------------------EecCCCCeEEEec---Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYDL------------------VVNNYVANISCIL---NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~~------------------~~~~~~~~i~~~~---~~ 87 (437)
.+.|+ |+++.++.+. .++.|.+||..+..+... .+++++..+.... +.
T Consensus 69 ~i~~s-pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred ceEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCC
Confidence 58899 9998888876 478999999776554443 4455555553332 34
Q ss_pred eEEE--EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC--CCCe----eeeccCCCCeEEEEEeC
Q psy4571 88 SILF--FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV--SKPS----HTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 88 ~i~~--~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~----~~~~~h~~~v~~l~~~~ 159 (437)
.+.+ +|......++.+. |....|.+...+++.+.||.+.+.|+++... .+.. ..+.-...+. . .+
T Consensus 148 ~v~V~~iD~~tv~~i~v~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~ 220 (368)
T 1mda_H 148 AAGLSVPGASDDQLTKSAS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN 220 (368)
T ss_dssp EEEEEETTTEEEEEEECSS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ET
T ss_pred eEEEEEEchhhceEEECCC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cc
Confidence 6777 7765533333322 2334565666777788899998888874100 1111 0111122343 3 66
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCcee-eeEecc----------CCCceEEEEEcCCCCcEEEEEe---C-----CCeEEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLK-LHSFES----------HKDEIFQVQWSPHNETILASSG---T-----DRRLHV 220 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~---~-----dg~i~v 220 (437)
++.. ++..+. +.|.+.|..+.... ...+.- .......++++|++++++++.. . ++.+.+
T Consensus 221 ~~~~-~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 221 YPGM-LVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp TTTE-EEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred cCCE-EEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 6665 555555 89999998753211 111110 0111222789999987665544 2 235669
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCCCCCceeeee
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 291 (437)
+|+.+.+.... +... ....+|+|+|||+.++++.. .++.|.++|+.+++.+..+..
T Consensus 299 iD~~t~~vv~~--------------i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 299 VTASVGQTSGP--------------ISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EESSSCCEEEC--------------CEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EECCCCeEEEE--------------EECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 99998755443 2222 25788999999987888888 699999999999988877764
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-06 Score=75.76 Aligned_cols=203 Identities=11% Similarity=0.174 Sum_probs=128.6
Q ss_pred EEEEEeeeccccccCCCc--ceEEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 89 ILFFEIIFTQNFPFPLSR--QDVAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 89 i~~~~~~~~~~~~~~~~v--~~~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
..++.....+.+++.... ..+.|+ ++.++.+.+.+| .|+++|++ +++.+....... ........+++..+
T Consensus 26 ~~~~~~~vv~~~phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~---Tgkv~~~~~l~~-~~FgeGit~~g~~l 99 (262)
T 3nol_A 26 IPIYDYQIVHSYPHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIE---SGKTLQQIELGK-RYFGEGISDWKDKI 99 (262)
T ss_dssp CCEEEEEEEEEEECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTT---TCCEEEEEECCT-TCCEEEEEEETTEE
T ss_pred CcccceEEEEEecCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECC---CCcEEEEEecCC-ccceeEEEEeCCEE
Confidence 444455555666765554 788998 357777777766 89999999 455555554322 33332233345655
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
....-.++.+.++|.++.+. +.++..-. ....++++++.++++ ..++.|.++|..+.+..... .
T Consensus 100 y~ltw~~~~v~v~D~~t~~~-~~ti~~~~---eG~glt~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I-----------~ 163 (262)
T 3nol_A 100 VGLTWKNGLGFVWNIRNLRQ-VRSFNYDG---EGWGLTHNDQYLIMS-DGTPVLRFLDPESLTPVRTI-----------T 163 (262)
T ss_dssp EEEESSSSEEEEEETTTCCE-EEEEECSS---CCCCEEECSSCEEEC-CSSSEEEEECTTTCSEEEEE-----------E
T ss_pred EEEEeeCCEEEEEECccCcE-EEEEECCC---CceEEecCCCEEEEE-CCCCeEEEEcCCCCeEEEEE-----------E
Confidence 66666799999999999776 66665322 223444677764544 45788999999886543331 1
Q ss_pred E-ecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc---------cCCceeeeecCCCCcccc
Q psy4571 245 I-HGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR---------SNGGISSTASPTASSTAS 313 (437)
Q Consensus 245 ~-~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~s~~g~~l~s 313 (437)
. ..+.. ..++.+.|. +|. +.+..-.++.|.+.|..+++.+..+...... ......++++|++..|..
T Consensus 164 V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred eccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 1 11111 335567776 665 6766667889999999999988888764221 112345699998776655
Q ss_pred cC
Q psy4571 314 ES 315 (437)
Q Consensus 314 ~s 315 (437)
.+
T Consensus 242 TG 243 (262)
T 3nol_A 242 TG 243 (262)
T ss_dssp EE
T ss_pred EC
Confidence 54
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-06 Score=76.51 Aligned_cols=201 Identities=11% Similarity=0.088 Sum_probs=127.1
Q ss_pred eccccccCCC--cceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeC
Q psy4571 96 FTQNFPFPLS--RQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 96 ~~~~~~~~~~--v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~ 170 (437)
..+.+++... ...++|+|+ +.++++.+. ++.|+++|+. ..+.+..+.-.. .....+++. +..+.++.-.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~---tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQ---TGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEECCTTCCEEEEEECST-TEEEEEECSTTTCEEEEEETT---TCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred EEEEEECCCCCCcccEEEeCC-CeEEEECCCCCCCEEEEEECC---CCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 3444555543 478999984 555554443 5799999999 455555543211 122345555 5556666667
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-Cc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GH 249 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h 249 (437)
++.+.++|..+.+. +.++..-... ...++++|+.++++ ..++.|.++|..+.+..... ..-. +.
T Consensus 85 ~~~v~viD~~t~~v-~~~i~~g~~~--g~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I-----------~Vg~~~~ 149 (266)
T 2iwa_A 85 KNIGFIYDRRTLSN-IKNFTHQMKD--GWGLATDGKILYGS-DGTSILYEIDPHTFKLIKKH-----------NVKYNGH 149 (266)
T ss_dssp CSEEEEEETTTTEE-EEEEECCSSS--CCEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEE-----------ECEETTE
T ss_pred CCEEEEEECCCCcE-EEEEECCCCC--eEEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEE-----------EECCCCc
Confidence 89999999998665 5565422111 24466788875554 46889999999886543331 1110 11
Q ss_pred -cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc----------cCCceeeeecCCCC-cccccCCC
Q psy4571 250 -TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR----------SNGGISSTASPTAS-STASESPT 317 (437)
Q Consensus 250 -~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~g~-~l~s~s~d 317 (437)
-...+.+.|. +|. +.+....++.|.+-|..+++.+..+...... ......++++|+++ +++++...
T Consensus 150 p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 150 RVIRLNELEYI-NGE-VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeEEEE-CCE-EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 1236778887 665 7767667899999999999998888764211 12345679999986 45555555
Q ss_pred Cc
Q psy4571 318 PT 319 (437)
Q Consensus 318 ~~ 319 (437)
+.
T Consensus 228 ~~ 229 (266)
T 2iwa_A 228 PK 229 (266)
T ss_dssp SE
T ss_pred Ce
Confidence 55
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3.1e-07 Score=89.20 Aligned_cols=234 Identities=9% Similarity=0.042 Sum_probs=135.6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEE-e-CCCCcEEEEE-----------------eCCCeEE
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSF-N-PYSEYILATG-----------------SADKTVA 175 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~-~-~~~~~~l~sg-----------------s~dg~i~ 175 (437)
..+++....++.|.+.|+. ..+....+. ........+++ + |++.++++++ -.++.+.
T Consensus 102 ~~lfVnd~~~~rVavIdl~---t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCD---VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECC---CceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3445555556679999999 444444222 12235788888 5 9999844443 2356899
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--------------CeEEEEEcCCCCCCC---------CC
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--------------RRLHVWDLSKIGEEQ---------ST 232 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d--------------g~i~vwd~~~~~~~~---------~~ 232 (437)
+.|..+.+. ..++.--. ....++++|+|+++++++... ..|.+.|........ ..
T Consensus 179 vID~~t~~v-~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEV-AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEE-EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeE-EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999998655 44444222 346788999999755554332 224444432211000 00
Q ss_pred C--CCCCCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC--------ceeeeeeecccCCcee
Q psy4571 233 E--DAEDGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD--------TKTMRLDSIRSNGGIS 301 (437)
Q Consensus 233 ~--~~~~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~ 301 (437)
. ......... +..... .....++.++|||+++++++..+.+|.++|+.+.+. ...+........++..
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 0 000000001 111111 123467899999998898888999999999996421 1111112223457788
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhh----------hhhhhhcCCC-----ccccccCCCCCCccccc
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC----------EEQRQLLGTE-----EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~----------~~~~~~~~h~-----~~~~~~~~~~~~~~~~~ 366 (437)
.+|+|+|....+..-++. +.+||+.++ +.+.++..|. ........+|||+.+.+
T Consensus 336 ~aF~~dG~aY~t~~ldsq-----------V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQ-----------VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp EEECTTSEEEEEETTTTE-----------EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred EEECCCCeEEEEEecCCc-----------EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 899999954455556666 777888773 3444554443 33456678889886554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.63 E-value=9.5e-06 Score=82.36 Aligned_cols=244 Identities=11% Similarity=0.022 Sum_probs=144.5
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------------CCeEEEe-------cCceEEEEEeeecccc-cc-
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------------VANISCI-------LNISILFFEIIFTQNF-PF- 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------------~~~i~~~-------~~~~i~~~~~~~~~~~-~~- 102 (437)
+.+++.++.|+.+..+|..++.+.-..... . ...+.+. .++.|..+|...++.. .+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567888889999999998776654222111 0 1222221 2467888886554421 00
Q ss_pred --C-------------------------------CCcceEEeeCCCCCEEEEEECCCc-------------------EEE
Q psy4571 103 --P-------------------------------LSRQDVAWHLLHESLFGSVADDQK-------------------LMI 130 (437)
Q Consensus 103 --~-------------------------------~~v~~~~~sp~~~~~l~~~~~dg~-------------------v~v 130 (437)
+ ..-..++++| ..++++.++.++. |..
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 0 0112578888 4677778877763 999
Q ss_pred EEcCCCCCCCCeeeecc--CC-------CCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEec-cC------
Q psy4571 131 WDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFE-SH------ 192 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h------ 192 (437)
+|.++ ++.+..++. |. .++.......+|. ..++.++.+|.+.++|.++++. +.... ..
T Consensus 280 lD~~T---G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 280 VNADT---GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL-LSAKGIVPQSWTKG 355 (689)
T ss_dssp EETTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSSEEE
T ss_pred EEccC---CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE-eccccccccccccc
Confidence 99984 455544432 21 1222222223443 2488999999999999999775 32111 00
Q ss_pred ---------------------CC-----------ceEEEEEcCCCCcEEEEEeC--------------------------
Q psy4571 193 ---------------------KD-----------EIFQVQWSPHNETILASSGT-------------------------- 214 (437)
Q Consensus 193 ---------------------~~-----------~v~~v~~~p~~~~~l~sg~~-------------------------- 214 (437)
.. .-..++++|+.. ++++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCc
Confidence 00 011368888877 4555422
Q ss_pred -------------------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 215 -------------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 215 -------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+|.|..||+.+++. +.....+. .+..-.+...+. +++.++.||.+
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~--------------~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l 498 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA--------------AWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRV 498 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE--------------EEEEEESS-SCCCCEEEETTT-EEEEECTTSEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCe--------------EeEccCCC-CccCccceECCC-EEEEECCCCcE
Confidence 36688888877643 22232222 222234555677 78889999999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCC-ccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASE 314 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~ 314 (437)
+.||.++|+.+..+..... .....+.++.+|+ ++++.
T Consensus 499 ~a~D~~tG~~lw~~~~~~~--~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 499 IAYAADTGEKLWEQPAASG--VMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEETTTCCEEEEEECSSC--CCSCCEEEEETTEEEEEEE
T ss_pred EEEECCCCccceeeeCCCC--cccCceEEEECCEEEEEEE
Confidence 9999999999888775321 1223356678887 44433
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.62 E-value=5.4e-07 Score=87.54 Aligned_cols=220 Identities=9% Similarity=-0.007 Sum_probs=133.7
Q ss_pred cCceEEEEEeeecc-----ccccCCCcceEEe-e-CCCCCEEEEEE------------------CCCcEEEEEcCCCCCC
Q psy4571 85 LNISILFFEIIFTQ-----NFPFPLSRQDVAW-H-LLHESLFGSVA------------------DDQKLMIWDTRSHNVS 139 (437)
Q Consensus 85 ~~~~i~~~~~~~~~-----~~~~~~~v~~~~~-s-p~~~~~l~~~~------------------~dg~v~vwd~~~~~~~ 139 (437)
.+..|.+.|+...+ .++.......+++ + | ++.++++++ .++.+.+.|.+ ..
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~---t~ 185 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD---KW 185 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT---TT
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceEEEEECC---CC
Confidence 34567777755433 3334456788888 4 8 566666663 34578899998 44
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC--------------------------------------eEEEEeCCC
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADK--------------------------------------TVALWDLRN 181 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg--------------------------------------~i~lwd~~~ 181 (437)
+...++.--. ....++++|+|++ +++.+.+. .|.+.|.++
T Consensus 186 ~v~~qI~Vgg-~pd~~~~spdGk~-~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 186 EVAWQVLVSG-NLDNCDADYEGKW-AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp EEEEEEEESS-CCCCEEECSSSSE-EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred eEEEEEEeCC-CccceEECCCCCE-EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 5554443212 3456789999997 55555332 366667765
Q ss_pred --CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC-ceEEEecCccccEEEEEE
Q psy4571 182 --LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP-ELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 182 --~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~ 258 (437)
++..+..+.. .....++.++|||+++++++..+.+|.++|+.+...... ....+. ..+... .-......++|
T Consensus 264 ~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~---~~l~~~~~v~~~v-~vG~gP~h~aF 338 (595)
T 1fwx_A 264 EASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY---ENADPRSAVVAEP-ELGLGPLHTAF 338 (595)
T ss_dssp GGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH---SCCCGGGGEEECC-BCCSCEEEEEE
T ss_pred cCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc---cccCcccceEEEc-CCCCCcceEEE
Confidence 2221222321 234578999999999888888899999999986421000 000000 111112 22345788999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCC----------CCCceeeeeee--cccCCceeeeecCCCCcccccCC
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDST----------DSDTKTMRLDS--IRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+|+| +..++.-.|+.|..||+.+ .+.+..+.... .|.........+|||++|++...
T Consensus 339 ~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 339 DGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 9999 6888889999999999987 33333433321 11112233377999999988743
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-05 Score=70.76 Aligned_cols=197 Identities=10% Similarity=0.015 Sum_probs=128.5
Q ss_pred EEEEeeCCCcceEEEeec--cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 38 YRLCVAEPFDDAVEERVI--NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~--d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.-+.|+ +++.++++.+. +..|++.|..++.+......+... ....+++. +
T Consensus 24 ~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-------------------------fgeGi~~~--g 75 (266)
T 2iwa_A 24 QGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-------------------------FGEGLTLL--N 75 (266)
T ss_dssp EEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-------------------------CEEEEEEE--T
T ss_pred ccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-------------------------ceEEEEEe--C
Confidence 446777 66655555443 467888888877776654322211 11134444 3
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--CC
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--HK 193 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h~ 193 (437)
+.++++.-.++.+.++|.. ..+.+..+...... ...++++|.. ++++..++.|.++|..+.+. ...+.. ..
T Consensus 76 ~~lyv~t~~~~~v~viD~~---t~~v~~~i~~g~~~--g~glt~Dg~~-l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~ 148 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRR---TLSNIKNFTHQMKD--GWGLATDGKI-LYGSDGTSILYEIDPHTFKL-IKKHNVKYNG 148 (266)
T ss_dssp TEEEEEETTCSEEEEEETT---TTEEEEEEECCSSS--CCEEEECSSS-EEEECSSSEEEEECTTTCCE-EEEEECEETT
T ss_pred CEEEEEEecCCEEEEEECC---CCcEEEEEECCCCC--eEEEEECCCE-EEEECCCCeEEEEECCCCcE-EEEEEECCCC
Confidence 5666667778999999998 45566666422111 2335668887 55555789999999998665 444332 11
Q ss_pred ---CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-----------ccccEEEEEEc
Q psy4571 194 ---DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-----------HTAKISDFSWN 259 (437)
Q Consensus 194 ---~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~v~~l~~~ 259 (437)
..++.+.|. ++. +++....++.|.+.|..+++...... +.+ -....+.|+|+
T Consensus 149 ~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~------------~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 149 HRVIRLNELEYI-NGE-VWANIWQTDCIARISAKDGTLLGWIL------------LPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTCCEEEEEE------------CHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred cccccceeEEEE-CCE-EEEecCCCCeEEEEECCCCcEEEEEE------------CCCcccccccccccccCceEEEEEc
Confidence 136778888 664 66666678899999999986544321 111 01356899999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
|+++.+++++...+.+...++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 999989999999999999888754
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.61 E-value=3.1e-05 Score=70.67 Aligned_cols=213 Identities=10% Similarity=-0.010 Sum_probs=126.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
.+..++|++.++.++.+-..++.|..+++..... ......+.........+++++.+..+.++-...+.|.+.+++...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 4568999986566666666678999999874110 111222222223567899998777656666778999999987533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. .............+++.|.+.+++++.... +.|...++..... +.+ ....-.....|+++|++
T Consensus 111 ~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~------------~~~--~~~~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 111 R-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------YSL--VTENIQWPNGITLDLLS 175 (316)
T ss_dssp E-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE------------EEE--ECSSCSCEEEEEEETTT
T ss_pred e-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe------------EEE--EECCCCCceEEEEeccC
Confidence 2 222222335678999999777666665443 7888888764321 001 11223467899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
..+.++-+..+.|..+|+... ..+.+.........+..+++. .+.+..+....+. |..+|..+|+.+
T Consensus 176 ~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-----------V~~~~~~~g~~~ 242 (316)
T 1ijq_A 176 GRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-----------IFSANRLTGSDV 242 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-----------EEEEETTTCCCC
T ss_pred CEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-----------EEEEeCCCCcce
Confidence 867777778889999999743 333332211111223344553 3444444444444 555565566554
Q ss_pred hhh
Q psy4571 343 RQL 345 (437)
Q Consensus 343 ~~~ 345 (437)
..+
T Consensus 243 ~~i 245 (316)
T 1ijq_A 243 NLL 245 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.60 E-value=1.6e-05 Score=80.43 Aligned_cols=242 Identities=9% Similarity=-0.023 Sum_probs=145.8
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------------CCeEEEec-------CceEEEEEeeecccc---c
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------------VANISCIL-------NISILFFEIIFTQNF---P 101 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------------~~~i~~~~-------~~~i~~~~~~~~~~~---~ 101 (437)
+..++.++.|+.+..+|..++.+.-..-.. . ...+.... ++.|..+|...++.. .
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 567888888999999998776654322222 0 12222221 577888886554422 1
Q ss_pred cC---------------------------------CCcceEEeeCCCCCEEEEEECCC-------------------cEE
Q psy4571 102 FP---------------------------------LSRQDVAWHLLHESLFGSVADDQ-------------------KLM 129 (437)
Q Consensus 102 ~~---------------------------------~~v~~~~~sp~~~~~l~~~~~dg-------------------~v~ 129 (437)
.. .....++++| ..++++.+..++ .|.
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 00 0113578888 466777776654 488
Q ss_pred EEEcCCCCCCCCeeeecc--CC-------CCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC-----
Q psy4571 130 IWDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFESHK----- 193 (437)
Q Consensus 130 vwd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~----- 193 (437)
.+|.++ ++.+..++. |. ....-+....+|+ ..++.++.+|.+.++|.++++. +.......
T Consensus 287 AlD~~T---G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 287 ALDPDT---GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF-ISAKNFVPVNWAS 362 (677)
T ss_dssp EECTTT---CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSSEE
T ss_pred EEECCC---CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE-eccccccccCccc
Confidence 899884 454444332 21 1222334444662 3589999999999999999776 43332110
Q ss_pred ------Cce------------------------EEEEEcCCCCcEEEEEeC-----------------------------
Q psy4571 194 ------DEI------------------------FQVQWSPHNETILASSGT----------------------------- 214 (437)
Q Consensus 194 ------~~v------------------------~~v~~~p~~~~~l~sg~~----------------------------- 214 (437)
.++ ..++++|++.. +++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL-VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE-EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE-EEEeChhcceeeecccccccccccccccccccccc
Confidence 111 15688898774 555432
Q ss_pred --------------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 215 --------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 215 --------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
.|.|..||+.+++.. .... +..++....+...+. +++.++.||.+++||.
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~--------------W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAA--------------WSVE-HVSPWNGGTLTTAGN-VVFQGTADGRLVAYHA 505 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEE--------------EEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEET
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEE--------------eecC-CCCCCcCcceEeCCC-EEEEECCCCcEEEEEC
Confidence 267888888876432 2222 222334445666777 6778899999999999
Q ss_pred CCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 281 STDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
++++.+..+.... ......+.++++|+..+
T Consensus 506 ~tG~~lw~~~~~~--~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 506 ATGEKLWEAPTGT--GVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp TTCCEEEEEECSS--CCCSCCEEEEETTEEEE
T ss_pred CCCceeeeeeCCC--CcccCCEEEEeCCEEEE
Confidence 9999988887532 12223345668886433
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.7e-05 Score=70.48 Aligned_cols=162 Identities=9% Similarity=0.037 Sum_probs=109.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+..++|++.++.++.+-...+.|..+++... ...............+++.+.+..++++-...+.|.+.+++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 346789999866666666667788999998732 22222222233467899998777666777778899999988643
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. .......-.....+++.|.+..++.+-..+ +.|...++........ ....-.....|+++|++
T Consensus 150 ~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~--------------~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 150 R-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII--------------ADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp C-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES--------------CCSSCSCEEEEEEETTT
T ss_pred e-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE--------------EECCCCCcceEEEeCCC
Confidence 2 222323335578999999777667776666 7899988875322110 11223357899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~ 283 (437)
..+.++-...+.|..+|+...
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEECCCCEEEEEeCCCC
Confidence 767777778889999998753
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-05 Score=74.62 Aligned_cols=233 Identities=10% Similarity=0.008 Sum_probs=137.5
Q ss_pred eEEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 80 NISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 80 ~i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
.+.......|+..++..... ..-...+..++|++.++.++.+-...+.|..+++... .....+.........++
T Consensus 89 ~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLA 165 (386)
T ss_dssp EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECSSCSCCCCEE
T ss_pred eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeCCCCCccEEE
Confidence 34444444555555432211 1123457789999866666666667788999998732 22222222233456789
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~ 235 (437)
+.+.+..++++-...+.|.+.+++.... .............+++.|.+..++++-..+ +.|..+++......
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------ 238 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR------ 238 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE------
Confidence 9987776667777788999999875332 222333335678999999877666666555 78888888653211
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
......-.....|+++|++..+.++-+..+.|..+|+... ....+... ....+..+++ ..+.++.+..
T Consensus 239 --------~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~--~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 239 --------IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQ--GLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp --------EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECS--SCSSEEEEEE-ETTEEEEEET
T ss_pred --------EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEEC--CCCCceEEEE-ECCEEEEeeC
Confidence 1111223357899999888767777778899999998753 22322211 1122334455 3344444444
Q ss_pred CCCcccccccccccccccccchhhhhhhhh
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
..+. |..+|..+|+....+
T Consensus 307 ~~~~-----------V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 307 HTKS-----------INSANKFTGKNQEII 325 (386)
T ss_dssp TTTE-----------EEEEETTTCCSCEEE
T ss_pred CCCe-----------EEEEECCCCcceEEE
Confidence 4444 455555556555444
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.6e-06 Score=74.18 Aligned_cols=192 Identities=10% Similarity=0.074 Sum_probs=121.6
Q ss_pred cccccCCC--cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 98 QNFPFPLS--RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 98 ~~~~~~~~--v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
+.+++... ...+.|+. +.++.+.+.+|.|+++|++++ +.+... - ..........+++..+....-.++.+.
T Consensus 47 ~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tg---kv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 47 REYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESA---QPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCS---SCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCC---cEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 34455443 36788874 678888888999999999954 444444 1 122323222334555666667799999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---cc
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT---AK 252 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~ 252 (437)
++|.++.+. +.++..- ..-..+ .++++. |+.+..++.|.++|..+.+..... . ...+. ..
T Consensus 120 V~D~~Tl~~-~~ti~~~-~eGwGL--t~Dg~~-L~vSdGs~~l~~iDp~T~~v~~~I-----------~-V~~~g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPPQR-ERTTRYS-GEGWGL--CYWNGK-LVRSDGGTMLTFHEPDGFALVGAV-----------Q-VKLRGQPVEL 182 (268)
T ss_dssp EEETTTTEE-EEEEECS-SCCCCE--EEETTE-EEEECSSSEEEEECTTTCCEEEEE-----------E-CEETTEECCC
T ss_pred EEECCcCcE-EEEEeCC-CceeEE--ecCCCE-EEEECCCCEEEEEcCCCCeEEEEE-----------E-eCCCCccccc
Confidence 999999765 6666532 222333 356775 444456889999999887544331 1 11111 24
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc---------c-CCceeeeecCCCCcccccC
Q psy4571 253 ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR---------S-NGGISSTASPTASSTASES 315 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~-~~~~~~~~s~~g~~l~s~s 315 (437)
++.+.|. +|. +.+..-.++.|.+.|.++++.+..+...... . .....++++|++..|...+
T Consensus 183 lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 183 INELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5677776 665 6766667889999999999998888764211 1 1234468999776555443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.49 E-value=0.00018 Score=67.62 Aligned_cols=167 Identities=7% Similarity=-0.014 Sum_probs=110.8
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~ 183 (437)
....+++.+.++.++++-...+.|.+.+++.. .....+.........++++|.+.+++.+-... +.|...+++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 45688999866777777667788888888632 22222333345689999999888656665555 789999887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-.....++++|++..++++-...+.|..+|+...... .+ ..........|++ ..+
T Consensus 237 ~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~------------~~--~~~~~~~P~giav-~~~- 299 (386)
T 3v65_B 237 R-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK------------AV--ISQGLPHPFAITV-FED- 299 (386)
T ss_dssp C-EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE------------EE--ECSSCSSEEEEEE-ETT-
T ss_pred c-EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE------------EE--EECCCCCceEEEE-ECC-
Confidence 2 22222233456899999887777777777888999998653211 11 1122334567777 333
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++++-...+.|..+|..+++....+..
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 4777878889999999878877766653
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.48 E-value=0.00032 Score=64.88 Aligned_cols=165 Identities=7% Similarity=0.008 Sum_probs=110.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~ 183 (437)
....+++.+.++.++.+-...+.|.+.+++.. ...............++++|.+.+++.+-... +.|...+++...
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 45789999866777777777789999998732 22222223345679999999877666666555 889999887533
Q ss_pred eeeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. ..+ ...-.....++++|++..++++-...+.|..+|+...... .+ ....-....+|++ ..+
T Consensus 194 ~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~------------~~--~~~~~~~P~giav-~~~ 256 (349)
T 3v64_C 194 R--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK------------AV--ISQGLPHPFAITV-FED 256 (349)
T ss_dssp C--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EE--ECSSCSSEEEEEE-ETT
T ss_pred c--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE------------EE--EeCCCCCceEEEE-ECC
Confidence 2 222 2223456899999988777777777889999998753211 11 1122334567777 334
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++-...+.|...+..+++....+.
T Consensus 257 -~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 257 -SLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -EEEEecCCCCeEEEEEccCCCccEEec
Confidence 477777788999999977787766664
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.48 E-value=5.2e-06 Score=75.97 Aligned_cols=201 Identities=10% Similarity=-0.021 Sum_probs=118.3
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+..+..++.++.|..+|.. + +.......+...+.++...+++. +..++.++.|..+|.. ++. ...+......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G---TEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE-KWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S---CEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE-EEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-C---CEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE-eEEEecCCCc
Confidence 3456678888999999976 2 23333333444566667777776 6778888999999998 554 4444444556
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+.++...+++. +..++ +.|..+| .++.. +.........+.++...++|. +..++.++.+
T Consensus 179 ~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~--------------~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl 237 (330)
T 3hxj_A 179 TSAASIGKDGT--IYFGS--DKVYAIN-PDGTE--------------KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHL 237 (330)
T ss_dssp CSCCEECTTCC--EEEES--SSEEEEC-TTSCE--------------EEEECCSSCCCSCCEECTTSC--EEEEETTTEE
T ss_pred eeeeEEcCCCE--EEEEe--CEEEEEC-CCCcE--------------EEEEccCCcceeceEECCCCe--EEEEcCCCeE
Confidence 77777877776 34444 7788998 54432 222333345577788888887 4456677888
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDR 355 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~ 355 (437)
..+|. +++....+... ..........++|.+. .++.++. +..+|. +|+....+......+..+
T Consensus 238 ~~~~~-~g~~~~~~~~~---~~~~~~~~~~~~g~l~-v~t~~gg-----------l~~~d~-~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 238 YAINP-DGTEKWRFKTG---KRIESSPVIGNTDTIY-FGSYDGH-----------LYAINP-DGTEKWNFETGSWIIATP 300 (330)
T ss_dssp EEECT-TSCEEEEEECS---SCCCSCCEECTTSCEE-EECTTCE-----------EEEECT-TSCEEEEEECSSCCCSCC
T ss_pred EEECC-CCCEeEEeeCC---CCccccceEcCCCeEE-EecCCCC-----------EEEECC-CCcEEEEEEcCCccccce
Confidence 88874 45444443321 1112223445556544 4555544 455563 455444433333334444
Q ss_pred CCCCCCc
Q psy4571 356 HSSDNDT 362 (437)
Q Consensus 356 ~~~~~~~ 362 (437)
...++|.
T Consensus 301 ~~d~~g~ 307 (330)
T 3hxj_A 301 VIDENGT 307 (330)
T ss_dssp EECTTCC
T ss_pred EEcCCCE
Confidence 4445554
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.4e-05 Score=72.14 Aligned_cols=256 Identities=9% Similarity=-0.033 Sum_probs=140.9
Q ss_pred cceEEEeeccCceEeeecCCCcee-EEEecC------------------CCCeE-EEecCceEEEEEeeecccc---ccC
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLY-DLVVNN------------------YVANI-SCILNISILFFEIIFTQNF---PFP 103 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~------------------~~~~i-~~~~~~~i~~~~~~~~~~~---~~~ 103 (437)
+..++.++.++.+..+|..++... ...... ....+ ....++.+..+|...++.. ...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 567777777888888887655533 221110 01122 3345667777876544422 222
Q ss_pred CCcc-eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCe-----EEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 104 LSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV-----NCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 104 ~~v~-~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
..+. ..... +..+++++.++.|..+|..+ ++.+.......... ...... +. .++.++.++.|..+
T Consensus 133 ~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~t---G~~~W~~~~~~~~~~~~~~~~~~~~--~~-~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 133 GEALSRPVVS---DGLVLIHTSNGQLQALNEAD---GAVKWTVNLDMPSLSLRGESAPTTA--FG-AAVVGGDNGRVSAV 203 (376)
T ss_dssp SCCCSCCEEE---TTEEEEECTTSEEEEEETTT---CCEEEEEECCC-----CCCCCCEEE--TT-EEEECCTTTEEEEE
T ss_pred CceEcCCEEE---CCEEEEEcCCCeEEEEECCC---CcEEEEEeCCCCceeecCCCCcEEE--CC-EEEEEcCCCEEEEE
Confidence 2221 12222 34677788899999999984 44444433221110 111222 33 37788889999999
Q ss_pred eCCCCceeeeEeccCCC-c---eE---EEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 178 DLRNLKLKLHSFESHKD-E---IF---QVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~-~---v~---~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
|.++++. +........ . +. .+.-.| .+. .+..++.++.+..+|..+++.... ..
T Consensus 204 d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~~~~~g~l~~~d~~tG~~~w~--------------~~- 266 (376)
T 3q7m_A 204 LMEQGQM-IWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFALAYNGNLTALDLRSGQIMWK--------------RE- 266 (376)
T ss_dssp ETTTCCE-EEEEECCC-----------CCCCCCEEETT-EEEEECTTSCEEEEETTTCCEEEE--------------EC-
T ss_pred ECCCCcE-EEEEecccCCCCcccccccccCCCcEEECC-EEEEEecCcEEEEEECCCCcEEee--------------cc-
Confidence 9998765 433321110 0 00 010111 133 366778899999999988753322 21
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
......+.. ++. .+..++.++.+..+|..+++....... ........... .+..+..++.++.
T Consensus 267 -~~~~~~~~~--~~~-~l~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~--~~~~l~v~~~~g~--------- 329 (376)
T 3q7m_A 267 -LGSVNDFIV--DGN-RIYLVDQNDRVMALTIDGGVTLWTQSD--LLHRLLTSPVL--YNGNLVVGDSEGY--------- 329 (376)
T ss_dssp -CCCEEEEEE--ETT-EEEEEETTCCEEEEETTTCCEEEEECT--TTTSCCCCCEE--ETTEEEEECTTSE---------
T ss_pred -CCCCCCceE--ECC-EEEEEcCCCeEEEEECCCCcEEEeecc--cCCCcccCCEE--ECCEEEEEeCCCe---------
Confidence 112333433 344 466778899999999999976544331 01111111122 3455666666776
Q ss_pred cccccccchhhhhhhhhcC
Q psy4571 329 QGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~ 347 (437)
+.++|..+|+.+.....
T Consensus 330 --l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 330 --LHWINVEDGRFVAQQKV 346 (376)
T ss_dssp --EEEEETTTCCEEEEEEC
T ss_pred --EEEEECCCCcEEEEEec
Confidence 78888888887655543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.44 E-value=7.2e-05 Score=67.83 Aligned_cols=200 Identities=8% Similarity=-0.026 Sum_probs=113.7
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CC-eEEEEeCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DK-TVALWDLR 180 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg-~i~lwd~~ 180 (437)
......++|+| ++.++++-..++.|..+|... .....+ .....+..+++.++|. ++++... ++ .|..+|..
T Consensus 31 ~~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g----~~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 31 NTFLENLASAP-DGTIFVTNHEVGEIVSITPDG----NQQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTC----CEEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECT
T ss_pred CCCcceEEECC-CCCEEEEeCCCCeEEEECCCC----ceEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCC
Confidence 35667899999 567777666789999998762 222222 2245688999999998 4555543 22 47677777
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC-CCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE-EQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
+++.....-.........++..+.+ .++++...++.|.++|...+.. ....... .... ...+.-.....| +
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~-~~~~----~~~~~~~~pngi--s 175 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPM-LARS----NSESVFPAANGL--K 175 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGG-GSCS----STTCCSCSEEEE--E
T ss_pred CCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCc-cccc----cccCCCCcCCCc--C
Confidence 6553111111112233555555554 3566655688999999765310 0000000 0000 000111234555 7
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
|++++++++-...+.|..+++.. ++.. ...... ....+..++++++|+++++....+.
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~-~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~ 234 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPG-EPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS 234 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBC-CCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCC-ccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe
Confidence 88887788888899999999975 3221 111100 1123455788899987776655555
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=0.00013 Score=66.51 Aligned_cols=255 Identities=10% Similarity=-0.013 Sum_probs=136.9
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
....+++. ++++++.++..++.|..|+..++.+............ ...++.. ..........+..+++.+.+
T Consensus 20 ~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~------~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 20 APNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNK-AFCENST------DAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp CCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCH-HHHTTCC------CGGGHHHHCCEEEEEEETTT
T ss_pred CceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccc-ccccccc------chhccccCCCCceEEEcCCC
Confidence 34557777 7788777888888888887665544333211100000 0000000 00000111246788998733
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeee-ecc-CCCCeEEEEEeC-CCCcEEEEEeC-----------------CCeEE
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHT-VDA-HTAEVNCLSFNP-YSEYILATGSA-----------------DKTVA 175 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~-h~~~v~~l~~~~-~~~~~l~sgs~-----------------dg~i~ 175 (437)
+. |..+...+.|..+|..++. .+.+.. ..+ .......+++.+ +|. +.++-.. ++.|.
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEE
Confidence 44 4455555558888876321 111111 111 123578899999 887 4554322 37788
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
.+|..+++. ..+.........++++|+++.++++-..++.|.+|++...... ..+.+... .+ ...
T Consensus 169 ~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~---------~~~~~~~~---~g-P~g 233 (322)
T 2fp8_A 169 KYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG---------TAEVLVKI---PN-PGN 233 (322)
T ss_dssp EEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT---------CEEEEEEC---SS-EEE
T ss_pred EEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC---------ccceEEeC---CC-CCC
Confidence 899876443 2221112334679999999865666666789999998753210 01111111 22 678
Q ss_pred EEEccCCCeEEEEEeC----------CCeEEEEeCCCCCCceeeeeeecc-cCCceeeeecCCCCcccccCCCCc
Q psy4571 256 FSWNPNEPWVICSVSE----------DNIMQEYCDSTDSDTKTMRLDSIR-SNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+++.++|. +.++... .+.|..+|.. ++.+..+...... ...+..+++ .+++++++....+.
T Consensus 234 i~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 234 IKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp EEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred eEECCCCC-EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 99999998 5555543 4678888874 5555555432211 112223333 46666665555544
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00026 Score=66.73 Aligned_cols=188 Identities=8% Similarity=-0.041 Sum_probs=118.0
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~ 156 (437)
+.......|+..++.... .......+..++|++.++.++.+-...+.|+.+++..... ................++
T Consensus 86 ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp EEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred eEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 334444555555543221 1122346789999996666666656678899998863211 122233333445678999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+.+.+..+.++-...+.|.+.+++.... ...+.........+++.|.+.+++.+-.. .+.|...++......
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~------ 238 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY------ 238 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE------
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE------
Confidence 9987776667777788999999986433 22333334457899999977766665533 467888888653211
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
......-.....|+++|++..+.++-...+.|...|+...
T Consensus 239 --------~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 239 --------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp --------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred --------EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 1112223467899999988867767677889999998754
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=0.0012 Score=60.11 Aligned_cols=167 Identities=9% Similarity=0.048 Sum_probs=109.2
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~ 182 (437)
....+++.+.+++++++-...+.|.+.++.. ..... ..........++++|.+.+++.+.... +.|...+++..
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCC----CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 4578999875666776667788999999872 22222 222345678999999877655554443 78888888753
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....++++|++..++++-...+.|..+|+..... +.+......-.....|++. +
T Consensus 154 ~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~------------~~~~~~~~~~~~P~giav~--~ 218 (316)
T 1ijq_A 154 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF--E 218 (316)
T ss_dssp CE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE--T
T ss_pred Ce-EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce------------EEEeecCCccCCcEEEEEE--C
Confidence 32 1122222345789999998877677777778999999875321 1122111122345677774 3
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.+++++-...+.|..++..+++....+.
T Consensus 219 ~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 219 DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 4477777788999999988887766654
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.9e-05 Score=66.20 Aligned_cols=193 Identities=8% Similarity=0.091 Sum_probs=119.6
Q ss_pred cccccCC--CcceEEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 98 QNFPFPL--SRQDVAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 98 ~~~~~~~--~v~~~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
+.++|.. -...+.|++ +.++.+.+.+| .|+++|+. .++.+....-.. ........+.+..+....-.++.
T Consensus 13 ~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~---tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLE---TGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETT---TCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred EEcCCCCccccccEEEEC--CEEEEECCCCCCceEEEEECC---CCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCE
Confidence 4445543 355889986 56677767654 89999999 455555554322 22222223335656666777999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT--- 250 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~--- 250 (437)
+.++|.++.+. +.++..-.. ...+.+++..+++| ..++.|.++|..+.+...+.. ...+.
T Consensus 87 v~v~D~~tl~~-~~ti~~~~~---Gwglt~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~------------V~~~g~~~ 149 (243)
T 3mbr_X 87 GFVYDLATLTP-RARFRYPGE---GWALTSDDSHLYMS-DGTAVIRKLDPDTLQQVGSIK------------VTAGGRPL 149 (243)
T ss_dssp EEEEETTTTEE-EEEEECSSC---CCEEEECSSCEEEE-CSSSEEEEECTTTCCEEEEEE------------CEETTEEC
T ss_pred EEEEECCcCcE-EEEEeCCCC---ceEEeeCCCEEEEE-CCCCeEEEEeCCCCeEEEEEE------------EccCCccc
Confidence 99999999665 666653222 23334567765544 558899999998875443311 11111
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc----------cCCceeeeecCCCCcccccC
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR----------SNGGISSTASPTASSTASES 315 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~g~~l~s~s 315 (437)
..++.+.|. +|. +.+..-.+..|.+.|..+++.+..+...... ......++++|++..|...+
T Consensus 150 ~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 150 DNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 245566665 565 6666656889999999999988888754321 11223458898766555443
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.35 E-value=9.2e-05 Score=64.43 Aligned_cols=144 Identities=10% Similarity=0.169 Sum_probs=89.7
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--C
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--H 192 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h 192 (437)
++.++.+.-.++.+.+||.. +.+.+.++..... ...+++++.. |+.+..++.|.++|..+.+. ...+.. .
T Consensus 96 g~~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~e---G~glt~dg~~-L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~ 167 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIR---NLRQVRSFNYDGE---GWGLTHNDQY-LIMSDGTPVLRFLDPESLTP-VRTITVTAH 167 (262)
T ss_dssp TTEEEEEESSSSEEEEEETT---TCCEEEEEECSSC---CCCEEECSSC-EEECCSSSEEEEECTTTCSE-EEEEECEET
T ss_pred CCEEEEEEeeCCEEEEEECc---cCcEEEEEECCCC---ceEEecCCCE-EEEECCCCeEEEEcCCCCeE-EEEEEeccC
Confidence 45666666678999999998 5666666653221 1333456776 55555678899999998765 444332 1
Q ss_pred C---CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 193 K---DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 193 ~---~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
. ..++.+.|. +|+ +++..-.++.|.+.|..+++...........+... ....-....+.|+|+|+++.+++||
T Consensus 168 g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~--~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 168 GEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG--PLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC--SCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccc--cccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 334567776 664 66666678899999999887554422110000000 0001124568999999999777776
Q ss_pred e
Q psy4571 270 S 270 (437)
Q Consensus 270 ~ 270 (437)
-
T Consensus 244 K 244 (262)
T 3nol_A 244 K 244 (262)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.31 E-value=0.0013 Score=59.86 Aligned_cols=167 Identities=8% Similarity=0.028 Sum_probs=109.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~~ 183 (437)
....+++.+.++.++.+-...+.|.+++++.. ...............+++.|.+.+++.+-. ..+.|...+++...
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCC---cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence 45688898866777777667789999998732 222222234456789999998776444432 35788888887532
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-...+.++++|++..++++-+..+.|..+|+..... +.+ ..+......++++. +.
T Consensus 157 ~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~--~~~~~~~P~glav~--~~ 219 (318)
T 3sov_A 157 R-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR------------QAV--VKGSLPHPFALTLF--ED 219 (318)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEE--ECSCCSCEEEEEEE--TT
T ss_pred e-EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce------------EEE--ecCCCCCceEEEEe--CC
Confidence 2 2222222345689999998777777777788999999875321 111 12223345667774 33
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++.+-...+.|..++..+++....+..
T Consensus 220 ~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 220 ILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 4777777889999999988887766653
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.27 E-value=8.3e-05 Score=67.81 Aligned_cols=202 Identities=8% Similarity=-0.077 Sum_probs=120.5
Q ss_pred EEecCceEEEEEeeecccc---c-cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 82 SCILNISILFFEIIFTQNF---P-FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~~---~-~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
....++.+..+|.. ++.. . ....+.++...+ ++. +..++.++.|..+|.. + +...........+.++..
T Consensus 112 v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 112 VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-G---TEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-S---CEEEEEECSSCCCSCCEE
T ss_pred EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-C---CEeEEEecCCCceeeeEE
Confidence 44456777777755 2211 1 122355666665 344 5567788999999986 2 333344334455677777
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.+++. +..++ +.|..+| .+++. ..........+.++...++|. +..++.++.|..+|... ..
T Consensus 185 d~~g~--l~v~t--~~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g-~~--------- 246 (330)
T 3hxj_A 185 GKDGT--IYFGS--DKVYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG-TE--------- 246 (330)
T ss_dssp CTTCC--EEEES--SSEEEEC-TTSCE-EEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS-CE---------
T ss_pred cCCCE--EEEEe--CEEEEEC-CCCcE-EEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC-CE---------
Confidence 77776 45555 7899999 55444 445544556688888888875 55677788888887432 21
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+.........+..+...+++. +..++.+|.+..+|. +++....+.. .......+...++|.+++ ++.+
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~~~~~---~~~~~~~~~~d~~g~l~~-gt~~ 314 (330)
T 3hxj_A 247 -----KWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKWNFET---GSWIIATPVIDENGTIYF-GTRN 314 (330)
T ss_dssp -----EEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEEEEEC---SSCCCSCCEECTTCCEEE-ECTT
T ss_pred -----eEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CCcEEEEEEc---CCccccceEEcCCCEEEE-EcCC
Confidence 122222222333455566665 557788888999996 5655544432 222233345557776544 6667
Q ss_pred Ccc
Q psy4571 318 PTN 320 (437)
Q Consensus 318 ~~~ 320 (437)
|.+
T Consensus 315 G~~ 317 (330)
T 3hxj_A 315 GKF 317 (330)
T ss_dssp SCE
T ss_pred CeE
Confidence 763
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.00042 Score=59.70 Aligned_cols=192 Identities=10% Similarity=0.039 Sum_probs=114.2
Q ss_pred EEEeeCCCcceEEEeeccC--ceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 39 RLCVAEPFDDAVEERVINE--EYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~--~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
-+.|+ . +.++++.+.++ .++..|..++.+....-.+...+ -..++.. ++
T Consensus 25 GL~~~-~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-------------------------geGi~~~--~~ 75 (243)
T 3mbr_X 25 GLFYL-R-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-------------------------GAGIVAW--RD 75 (243)
T ss_dssp EEEEE-T-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-------------------------EEEEEEE--TT
T ss_pred cEEEE-C-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-------------------------eeEEEEe--CC
Confidence 35666 3 45555555543 77888877777765543222110 0122332 45
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--CC-
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--HK- 193 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h~- 193 (437)
.++...-.++.+.+||.. +.+.+.++..... -..+ .+++.. |+.+..++.|.++|..+.+. ...+.. +.
T Consensus 76 ~ly~ltw~~~~v~v~D~~---tl~~~~ti~~~~~-Gwgl--t~dg~~-L~vSdgs~~l~~iDp~t~~~-~~~I~V~~~g~ 147 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLA---TLTPRARFRYPGE-GWAL--TSDDSH-LYMSDGTAVIRKLDPDTLQQ-VGSIKVTAGGR 147 (243)
T ss_dssp EEEEEESSSSEEEEEETT---TTEEEEEEECSSC-CCEE--EECSSC-EEEECSSSEEEEECTTTCCE-EEEEECEETTE
T ss_pred EEEEEEeeCCEEEEEECC---cCcEEEEEeCCCC-ceEE--eeCCCE-EEEECCCCeEEEEeCCCCeE-EEEEEEccCCc
Confidence 677777789999999998 5666666653322 2344 456776 55556689999999998765 444432 21
Q ss_pred --CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 194 --DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 194 --~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
..++.+.+. +|+ +++..-.+..|.+.|..+++...........+.... ....-.+-.+.|+++|+++.+++||-
T Consensus 148 ~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 148 PLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 235666765 554 666665677999999999875544321111000000 00112246789999999987887773
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.24 E-value=0.0011 Score=60.00 Aligned_cols=231 Identities=10% Similarity=0.007 Sum_probs=128.3
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
....+++. +++.++++...++.|..++..++... . +. ....+..+++.+ +
T Consensus 33 ~pegia~~-~~g~lyv~d~~~~~I~~~d~~g~~~~-~-------------------~~--------~~~~p~gia~~~-d 82 (306)
T 2p4o_A 33 FLENLASA-PDGTIFVTNHEVGEIVSITPDGNQQI-H-------------------AT--------VEGKVSGLAFTS-N 82 (306)
T ss_dssp CEEEEEEC-TTSCEEEEETTTTEEEEECTTCCEEE-E-------------------EE--------CSSEEEEEEECT-T
T ss_pred CcceEEEC-CCCCEEEEeCCCCeEEEECCCCceEE-E-------------------Ee--------CCCCceeEEEcC-C
Confidence 34567787 67777777666677766665443211 1 00 112356889999 4
Q ss_pred CCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec---
Q psy4571 116 ESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE--- 190 (437)
Q Consensus 116 ~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~--- 190 (437)
++++++..... .|..+|..++. ...+... ........++..+++. ++++-..++.|..+|...+...+....
T Consensus 83 G~l~vad~~~~~~~v~~~d~~~g~-~~~~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 83 GDLVATGWNADSIPVVSLVKSDGT-VETLLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSC-EEEEEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CcEEEEeccCCcceEEEEcCCCCe-EEEEEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 56665544332 46666765321 1111111 1122334555555443 455555689999999875421121100
Q ss_pred ------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 191 ------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 191 ------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..-...+.+ +|++++++++-...+.|.++++....... ..+.+... .....+++.++|.
T Consensus 160 ~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--------~~~~~~~~----~~P~gi~vd~dG~- 224 (306)
T 2p4o_A 160 ARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--------EPEIFVEQ----TNIDDFAFDVEGN- 224 (306)
T ss_dssp SCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--------CCEEEEES----CCCSSEEEBTTCC-
T ss_pred ccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--------ccEEEecc----CCCCCeEECCCCC-
Confidence 111234555 78888777777778899999997521111 01111111 2346688999998
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec---CCCCcccccCC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS---PTASSTASESP 316 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s---~~g~~l~s~s~ 316 (437)
++++....+.|.++|.. ++....... ......+..++|. |++..|...+.
T Consensus 225 l~va~~~~~~V~~~~~~-G~~~~~~~~-~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPD-RSTTIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTT-CCEEEEECG-GGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCC-CCEEEEeec-ccccCCceEEEEecccCCCCEEEEECC
Confidence 77777778899999975 443211111 1122456677887 88776655543
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.23 E-value=5.5e-05 Score=76.47 Aligned_cols=175 Identities=10% Similarity=0.078 Sum_probs=102.3
Q ss_pred EEEEeCCCCcEEEEEeCCC-------------------eEEEEeCCCCceeeeEecc--CC-------CceEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADK-------------------TVALWDLRNLKLKLHSFES--HK-------DEIFQVQWSPHN 205 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg-------------------~i~lwd~~~~~~~~~~~~~--h~-------~~v~~v~~~p~~ 205 (437)
.++++|+.. +++.++.++ .|..+|.++++. +..+.. |. .+.....+..+|
T Consensus 234 ~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~-~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce-eeEeecCCCccccccCCCCcEEEEeccCC
Confidence 467888777 578887776 499999999776 444432 21 233333333455
Q ss_pred C--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--------CCCceEE------------EecCccc--cEEEEEEccC
Q psy4571 206 E--TILASSGTDRRLHVWDLSKIGEEQSTEDAED--------GPPELLF------------IHGGHTA--KISDFSWNPN 261 (437)
Q Consensus 206 ~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~~------------~~~~h~~--~v~~l~~~p~ 261 (437)
+ ..++.++.+|.++++|..+++.......... .....+. ...+..+ .-..++++|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 3 2578899999999999999875522110000 0000000 0000000 0112567777
Q ss_pred CCeEEEE-----------------------------------EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 262 EPWVICS-----------------------------------VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 262 ~~~~l~s-----------------------------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
...+++. ...+|.|..||+.+++......... .........
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~~~~~t 467 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT----HWNGGTLST 467 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEE
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC----CCcCceeEe
Confidence 6622221 1134889999999998776665421 222234556
Q ss_pred CCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 307 TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 307 ~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
.+.+++.++.++. ++.||..+|+++..+
T Consensus 468 ~gg~vf~g~~dg~-----------l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 468 AGNLVFQGTAAGQ-----------MHAYSADKGEALWQF 495 (668)
T ss_dssp TTTEEEEECTTSE-----------EEEEETTTCCEEEEE
T ss_pred CCCEEEEECCccc-----------chhhhhhcChhheEe
Confidence 7788888888888 677777777766555
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0032 Score=59.25 Aligned_cols=168 Identities=9% Similarity=0.043 Sum_probs=109.6
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~ 183 (437)
....+++.+.+++++.+-...+.|.+.+++.. .....+.........|+++|.+.+++.+-.. .+.|...+++...
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 56788998866777777677889999988732 2222222334458899999987764554433 3789888887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-.....|+++|++..++++-...+.|..+|+..... ..+....+.-....+|++ ++.
T Consensus 237 ~-~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~~~~~~l~~P~gl~v--~~~ 301 (400)
T 3p5b_L 237 I-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAV--FED 301 (400)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC------------EEEEECSSTTSSEEEEEE--ETT
T ss_pred c-EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc------------EEEEeCCCCCCCCEEEEE--eCC
Confidence 2 2222223356789999998877666666778899999875321 112211122234456666 344
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++-...+.|..+|..+++....+.
T Consensus 302 ~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 477787888999999988887776665
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00035 Score=63.66 Aligned_cols=182 Identities=8% Similarity=0.015 Sum_probs=111.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--------------------CCCCeEEEEEeC-CCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--------------------HTAEVNCLSFNP-YSEY 163 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--------------------h~~~v~~l~~~~-~~~~ 163 (437)
...+++|++ +++++.++..++.|..||.... . +..+.. ....+..+++.+ ++.
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~- 93 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNS---G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ- 93 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTT---C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCC---c-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence 467899999 5676667888899999987632 1 222210 013578999998 554
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEecc-----CCCceEEEEEcC-CCCcEEEEEeC-----------------CCeEEE
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFES-----HKDEIFQVQWSP-HNETILASSGT-----------------DRRLHV 220 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~-----h~~~v~~v~~~p-~~~~~l~sg~~-----------------dg~i~v 220 (437)
|..+...+.|..+|..++. +..+.. .......+++.| +|. ++++-.. ++.|..
T Consensus 94 -l~v~d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp -EEEEETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred -EEEEECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEE
Confidence 5556555668888877533 222211 113468899999 886 5555432 366888
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC--ceeeeeeecccCC
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD--TKTMRLDSIRSNG 298 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~ 298 (437)
+|..++.. ......-.....|+++|+++.++++-..++.|..+++..... ...+. . .. +
T Consensus 170 ~d~~~~~~---------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~~-g 230 (322)
T 2fp8_A 170 YDPSTKET---------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-IP-N 230 (322)
T ss_dssp EETTTTEE---------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-CS-S
T ss_pred EeCCCCEE---------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE--e-CC-C
Confidence 88765321 101111123467999999986666667788999999885422 11111 1 11 2
Q ss_pred ceeeeecCCCCcccccC
Q psy4571 299 GISSTASPTASSTASES 315 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s 315 (437)
+..+++.++|.++++..
T Consensus 231 P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred CCCeEECCCCCEEEEec
Confidence 55568888888666653
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00082 Score=68.79 Aligned_cols=165 Identities=8% Similarity=-0.030 Sum_probs=109.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..++|++.++.++.+-...+.|+.+++..... ......+.........|++.+.+.+|+++-...+.|.+.+++..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 45678999986666666666678899888873211 12233333334567789999888877777778899999999864
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.. ...+.........|++.|.+.+++++-..+ +.|.+.++...... ......-.....|++.+.
T Consensus 504 ~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~--------------~lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 504 KR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--------------SLVTENIQWPNGITLDLL 568 (791)
T ss_dssp SE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--------------EEECSSCSCEEEEEEETT
T ss_pred eE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE--------------EEEeCCCCCceEEEEecC
Confidence 32 222323345578999999876666665333 78888888653211 112222346789999988
Q ss_pred CCeEEEEEeCCCeEEEEeCCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+..+.++-...+.|...++...
T Consensus 569 ~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 569 SGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSC
T ss_pred CCeEEEEeCCCCcEEEEecCCC
Confidence 7767766667789999998754
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=0.0021 Score=66.48 Aligned_cols=256 Identities=6% Similarity=0.005 Sum_probs=144.0
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc------------eeEEEecCCCCeEEEecCceEEEEEeeecc--cccc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF------------LYDLVVNNYVANISCILNISILFFEIIFTQ--NFPF 102 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~--~~~~ 102 (437)
|.+++.. +++.+.+ |..++-+..|+..++. +..+.....+....+..++.+..++....+ .+..
T Consensus 175 i~~i~~d-~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYR-QGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEE-ETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEEC-CCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeec
Confidence 7777777 6665554 5554446667654432 222222222222233334456677643221 1111
Q ss_pred ---------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--------cCCCCeEEEEEeCCCCcEE
Q psy4571 103 ---------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--------AHTAEVNCLSFNPYSEYIL 165 (437)
Q Consensus 103 ---------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l 165 (437)
...|.++...+ ++.+. .|+.+| |.+||..+. . ...+. -....|.++...++|. |
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~-~g~lW-igt~~G-l~~~~~~~~---~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--l 323 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDS-QNRLW-IGTFND-LNIYHEGTD---S-FASYSSNPVENGSLSQRSVRSIFMDSQGG--M 323 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECT-TSCEE-EEESSC-EEEEETTTT---E-EEEECCCTTSTTSCSSSCEEEEEECTTSC--E
T ss_pred CCCCccccCCCeEEEEEEcC-CCCEE-EEeCCh-hheEcCCCC---e-EEEEecCCCCCCCCCCCcEEEEEEeCCcC--E
Confidence 23577888877 44444 455554 888987632 1 22221 1235799999999887 7
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEecc-------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
-.|+.++-|..++..+.. ...+.. ....|.++...++|. |-.|+.++-|..||..+.......... ..
T Consensus 324 Wigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~-~~ 398 (795)
T 4a2l_A 324 WLGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQE-DE 398 (795)
T ss_dssp EEEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC----
T ss_pred EEEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCC-CC
Confidence 778888889999876533 222211 235699999998886 556777777999988764321110000 00
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+ ...-....|.++...++|. +|..|+.++-|..+|..+++.. .+... ......+..+...++|.+++...
T Consensus 399 ~-----~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 399 S-----ARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp --------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred c-----ccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 0 0001135689998888887 4666777778999999876432 22110 01123344456667777666554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=0.0015 Score=67.48 Aligned_cols=250 Identities=8% Similarity=0.000 Sum_probs=138.1
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc-------------eeEEEecCCCCeEEEecCceEEEEEeeeccccc--
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-------------LYDLVVNNYVANISCILNISILFFEIIFTQNFP-- 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-- 101 (437)
|.+++.. +++.+.+. ..+ .+..|+..++. +..+.............++.+..++....+...
T Consensus 133 i~~i~~d-~~g~lwi~-t~~-gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~ 209 (795)
T 4a2l_A 133 VNGIEEI-SPEQLLIS-TPE-GLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVI 209 (795)
T ss_dssp CCEEEEE-ETTEEEEE-ETT-EEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC
T ss_pred EEEEEEC-CCCCEEEE-ECC-ceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEec
Confidence 6666666 55655543 333 46667754332 233333233332233434456667643322111
Q ss_pred ---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--------CCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 102 ---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--------HTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 102 ---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
....|.++...+ ++.+. .|+.++-+..||..+. + ...+.. ....|.++...++|. |..|+.
T Consensus 210 ~~~~~~~i~~i~~d~-~g~lw-igt~~~Gl~~~~~~~~---~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~ 281 (795)
T 4a2l_A 210 PILGTKQIQAILQQS-PTRIW-VATEGAGLFLINPKTK---E-IKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWIGTF 281 (795)
T ss_dssp ----CCCEEEEEEEE-TTEEE-EEEBSSCEEEEETTTT---E-EEEECCCTTCTTSCSCSBEEEEEECTTSC--EEEEES
T ss_pred CCCCCCeeEEEEEcC-CCCEE-EEECCCCeEEEeCCCC---e-EEEeecCCCCccccCCCeEEEEEEcCCCC--EEEEeC
Confidence 134577777776 34444 4554444888997632 1 112211 135699999998887 556666
Q ss_pred CCeEEEEeCCCCceeeeEecc--------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 171 DKTVALWDLRNLKLKLHSFES--------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
+ -|.++|..+... ..+.. ....|.++...++|. +-.|+.++-|..++............ . . .
T Consensus 282 ~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~-~-~-~-- 351 (795)
T 4a2l_A 282 N-DLNIYHEGTDSF--ASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFKNIRNI-P-Y-K-- 351 (795)
T ss_dssp S-CEEEEETTTTEE--EEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSSEEECCC-T-T-S--
T ss_pred C-hhheEcCCCCeE--EEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccceEEcCC-C-C-C--
Confidence 6 588899876442 22211 235699999999986 55677777788898755321110000 0 0 0
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee------ecccCCceeeeecCCCC-cccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD------SIRSNGGISSTASPTAS-STAS 313 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~s~~g~-~l~s 313 (437)
..-....|.++...++|. +..|+.++-|..||..+++.. .+... ......+..+...++|. +.+.
T Consensus 352 ---~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig 423 (795)
T 4a2l_A 352 ---NSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG 423 (795)
T ss_dssp ---SSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEE
T ss_pred ---CCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEE
Confidence 001234699999988887 446777777999998876432 22111 01123344556667887 4443
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00061 Score=62.02 Aligned_cols=161 Identities=9% Similarity=0.017 Sum_probs=105.5
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
...++|++.++.++.+-...+.|..+++..... .. ..+...-.....+++.+.+..++.+-...+.|.+++++....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~-~~-~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~- 113 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQ-NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 113 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-CC-EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-eE-EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-
Confidence 457889986566666666678899999874321 11 122222335678999987776667767788999999886332
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
.............+++.|.+..++.+-. ..+.|...++...... .+ ....-...+.|+++|++..
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------------~~--~~~~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------------II--INSEIYWPNGLTLDYEEQK 179 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE------------EE--ECSSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE------------EE--EECCCCCccEEEEeccCCE
Confidence 2222233456789999997665555542 3578888887653211 01 1122235689999998876
Q ss_pred EEEEEeCCCeEEEEeCCCC
Q psy4571 265 VICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~ 283 (437)
+.++-+..+.|..+|+...
T Consensus 180 lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEEEETTTTEEEEEETTSC
T ss_pred EEEEECCCCEEEEEcCCCC
Confidence 7777778899999998753
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1.1e-05 Score=82.01 Aligned_cols=165 Identities=9% Similarity=-0.022 Sum_probs=100.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..++|++.++.++.+-...+.|+.+++..... ......+.........|++.+.+..++++-...+.|.+.++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45778999995555555555668899999874100 11111111112234568888666665666667789999998864
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.. ...+.........+++.|.+.+++++-... +.|.++++....... + ....-...+.|+|+|+
T Consensus 486 ~~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~------------l--~~~~l~~PnGlavd~~ 550 (699)
T 1n7d_A 486 KR-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS------------L--VTENIQWPNGITLDLL 550 (699)
T ss_dssp CE-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE------------E--SCSSCSSCCCEEECTT
T ss_pred ce-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE------------E--EeCCCCCccEEEEecc
Confidence 32 222222224457889999776655554333 678777765432110 0 1111234578999998
Q ss_pred CCeEEEEEeCCCeEEEEeCCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+..++++-+..+.|..+++...
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSS
T ss_pred CCEEEEEecCCCeEEEEccCCC
Confidence 7767777788899999999753
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00089 Score=62.34 Aligned_cols=239 Identities=6% Similarity=-0.080 Sum_probs=131.8
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------CCeE-EEecCceEEEEEeeecccc---ccCCCc------c
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------VANI-SCILNISILFFEIIFTQNF---PFPLSR------Q 107 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v------~ 107 (437)
+..++.++.++.+..+|..++...-....+ . ...+ ....++.+..+|...++.. .....+ .
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~ 182 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGES 182 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCC
Confidence 567778888999999998766543221111 1 1122 3345677888886544322 111111 2
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-------CeEEEEEeC--CCCcEEEEEeCCCeEEEEe
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-------EVNCLSFNP--YSEYILATGSADKTVALWD 178 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-------~v~~l~~~~--~~~~~l~sgs~dg~i~lwd 178 (437)
..... +..++.++.+|.|..+|..+ ++.+........ .+..+.-.| .+. .++.++.++.+..+|
T Consensus 183 ~~~~~---~~~v~~g~~~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 183 APTTA---FGAAVVGGDNGRVSAVLMEQ---GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFALAYNGNLTALD 255 (376)
T ss_dssp CCEEE---TTEEEECCTTTEEEEEETTT---CCEEEEEECCC-----------CCCCCCEEETT-EEEEECTTSCEEEEE
T ss_pred CcEEE---CCEEEEEcCCCEEEEEECCC---CcEEEEEecccCCCCcccccccccCCCcEEECC-EEEEEecCcEEEEEE
Confidence 22222 34677788899999999984 344433321110 000000011 134 377888899999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-CccccEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHTAKISDFS 257 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 257 (437)
.++++. +.... ......+... +.. +..++.++.|..+|..+++.... .. .....+....
T Consensus 256 ~~tG~~-~w~~~--~~~~~~~~~~--~~~-l~~~~~~g~l~~~d~~tG~~~w~--------------~~~~~~~~~~~~~ 315 (376)
T 3q7m_A 256 LRSGQI-MWKRE--LGSVNDFIVD--GNR-IYLVDQNDRVMALTIDGGVTLWT--------------QSDLLHRLLTSPV 315 (376)
T ss_dssp TTTCCE-EEEEC--CCCEEEEEEE--TTE-EEEEETTCCEEEEETTTCCEEEE--------------ECTTTTSCCCCCE
T ss_pred CCCCcE-Eeecc--CCCCCCceEE--CCE-EEEEcCCCeEEEEECCCCcEEEe--------------ecccCCCcccCCE
Confidence 998775 43333 2334444443 443 66777899999999988754322 21 1111111122
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
. .+. .++.++.+|.+..+|..+++.+...... .......... .+..+..++.++.
T Consensus 316 ~--~~~-~l~v~~~~g~l~~~d~~tG~~~~~~~~~---~~~~~~~~~~-~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 316 L--YNG-NLVVGDSEGYLHWINVEDGRFVAQQKVD---SSGFQTEPVA-ADGKLLIQAKDGT 370 (376)
T ss_dssp E--ETT-EEEEECTTSEEEEEETTTCCEEEEEECC---TTCBCSCCEE-ETTEEEEEBTTSC
T ss_pred E--ECC-EEEEEeCCCeEEEEECCCCcEEEEEecC---CCcceeCCEE-ECCEEEEEeCCCE
Confidence 2 234 5668888999999999999877665531 1111111111 2345556666666
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.14 E-value=9e-05 Score=64.52 Aligned_cols=190 Identities=8% Similarity=-0.054 Sum_probs=110.8
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
...+.|+. ..++.+.+.+|.|+.+|+++++. +..+ -..........++++.+++..-.++.+.+||..+.+...+
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv-~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQP-VWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSC-SEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcE-EeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 47888873 45788889999999999999776 4444 2233333222334555777777899999999998754333
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc--CCceeeeecCCCC
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS--NGGISSTASPTAS 309 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~ 309 (437)
+.... .-..++ ++++.++++- .++.|.++|..+.+....+....... .....+.+. +|+
T Consensus 132 --------------i~~~~-eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 132 --------------TRYSG-EGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp --------------EECSS-CCCCEE--EETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred --------------EeCCC-ceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 32211 113333 5777566554 58899999999998888877643111 011223444 777
Q ss_pred cccccCCCCcccccccccccccccccchhhhhhhh--hcCCCccccccCCCCCCcccc
Q psy4571 310 STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ--LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 310 ~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~--~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+.+....+..+.+.+....+.+..+|+........ ...-.+..+.+++.|++..+.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 66665556664444444444444444432211110 011223456677887665433
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.12 E-value=0.00015 Score=73.36 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=75.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCC-----------cEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQ-----------KLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg-----------~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
+..-..+++.|.++.+++.|+.++ .+.+||+.+.. ...+..+. .+.....++++.+++. +++.|+.
T Consensus 185 P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~ 262 (656)
T 1k3i_A 185 PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGN 262 (656)
T ss_dssp SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSC-EEEECSS
T ss_pred CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCC-EEEeCCC
Confidence 334456777775677888887543 58899998653 33333332 2333344577788888 6888874
Q ss_pred -CCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEe-CC-----CeEEEEEcCCCC
Q psy4571 171 -DKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSG-TD-----RRLHVWDLSKIG 227 (437)
Q Consensus 171 -dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~-~d-----g~i~vwd~~~~~ 227 (437)
+..+.+||..+.+... ..+. ....-.+++..++++ +++.|+ .+ ..+.+||..+..
T Consensus 263 ~~~~v~~yd~~t~~W~~~~~~~-~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSWIPGPDMQ-VARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp STTCEEEEEGGGTEEEECCCCS-SCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CCCceEEecCcCCceeECCCCC-ccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCc
Confidence 5689999998754311 1111 111123456667887 688887 34 468999997653
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00089 Score=58.45 Aligned_cols=200 Identities=10% Similarity=0.126 Sum_probs=125.6
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+..++|+|+++.++++...++.|...|.. .+.++.+. +-....-.|++.+++.+ +++.-.++.+.++++..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~----g~v~~~i~l~g~~D~EGIa~~~~g~~-~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN----GDLIRTIPLDFVKDLETIEYIGDNQF-VISDERDYAIYVISLTP 100 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT----CCEEEEEECSSCSSEEEEEECSTTEE-EEEETTTTEEEEEEECT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC----CCEEEEEecCCCCChHHeEEeCCCEE-EEEECCCCcEEEEEcCC
Confidence 34688999999766677778888888888886 34444442 22256788999988873 56655678899998765
Q ss_pred Cce--eeeEec------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE----ecCc
Q psy4571 182 LKL--KLHSFE------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI----HGGH 249 (437)
Q Consensus 182 ~~~--~~~~~~------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~h 249 (437)
... .+.... ..+.....++|+|.++.++++.-.+ ...+|.+... .... ....+.. ...+
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~--~~~~------~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGL--LSSN------ELHISKDKALQRQFT 171 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEEST--TCSS------CCEEEECHHHHHTCC
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEccc--ccCC------ceeeecchhhccccc
Confidence 442 111111 2345578999999997655555444 3444444311 0000 0000000 0112
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc------CCceeeeecCCCCcccccCCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS------NGGISSTASPTASSTASESPT 317 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~s~~g~~l~s~s~d 317 (437)
...+.+++++|....+++....+..+.++|.. ++....+.+..... ...--+++.++|++.+++..+
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 33578999999888788888889999999977 44666665543211 234557999999877765443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00032 Score=70.86 Aligned_cols=184 Identities=11% Similarity=0.063 Sum_probs=106.5
Q ss_pred eEEeeCCCCCEEEEEECCC-------------------cEEEEEcCCCCCCCCeeeecc--CC-------CCeEEEEEeC
Q psy4571 108 DVAWHLLHESLFGSVADDQ-------------------KLMIWDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNP 159 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg-------------------~v~vwd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~ 159 (437)
.+++.| ..++++.++.++ .|..+|.++ ++.+..++. |. .+.....+..
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t---G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT---GKLAWHYQVTPGDSWDFTATQQITLAELNI 309 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC---CceeeEeecCCCccccccCCCCcEEEEecc
Confidence 468888 456777777665 388899884 455544432 22 2333333334
Q ss_pred CCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC------------Cce------------------------EEEEE
Q psy4571 160 YSE--YILATGSADKTVALWDLRNLKLKLHSFESHK------------DEI------------------------FQVQW 201 (437)
Q Consensus 160 ~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~------------~~v------------------------~~v~~ 201 (437)
+|+ .+++.++.+|.+.++|.++++. +....... .++ ..+++
T Consensus 310 ~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~ 388 (668)
T 1kv9_A 310 DGKPRKVLMQAPKNGFFYVLDRTNGKL-ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF 388 (668)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE
T ss_pred CCcEEEEEEEECCCCEEEEEECCCCCE-eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceE
Confidence 554 2488999999999999999775 32111100 000 12677
Q ss_pred cCCCCcEEEEE-----------------------------------eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 202 SPHNETILASS-----------------------------------GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 202 ~p~~~~~l~sg-----------------------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+|+...+++.. ..+|.|..||+.+++... ..
T Consensus 389 dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W--------------~~ 454 (668)
T 1kv9_A 389 NPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAW--------------KV 454 (668)
T ss_dssp ETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEE--------------EE
T ss_pred CCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEE--------------Ec
Confidence 77765333211 123778888888764322 22
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-ccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASE 314 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~ 314 (437)
..+ .......+...+. +++.++.|+.++.||.++++.+..+....... ...+.+..+|+ +++.+
T Consensus 455 ~~~-~~~~~~~~~t~gg-~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~--~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 455 PYP-THWNGGTLSTAGN-LVFQGTAAGQMHAYSADKGEALWQFEAQSGIV--AAPMTFELAGRQYVAIM 519 (668)
T ss_dssp EES-SSCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEEE
T ss_pred cCC-CCCcCceeEeCCC-EEEEECCcccchhhhhhcChhheEecCCCCcc--cCceEEEECCEEEEEEE
Confidence 211 1222233444566 67788999999999999999888877532111 12234455666 44433
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0011 Score=65.59 Aligned_cols=174 Identities=11% Similarity=0.009 Sum_probs=99.1
Q ss_pred EEEeCCCCcEEEEEeCC----------------CeEEEEeCCCCceeeeEecc--C--------CCceEEEEEcCCCC--
Q psy4571 155 LSFNPYSEYILATGSAD----------------KTVALWDLRNLKLKLHSFES--H--------KDEIFQVQWSPHNE-- 206 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d----------------g~i~lwd~~~~~~~~~~~~~--h--------~~~v~~v~~~p~~~-- 206 (437)
+++.++... ++.++.+ +.|..+|.++++. +..+.. | ..++ -+...++|+
T Consensus 240 ~a~d~~~g~-vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~-~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~ 316 (571)
T 2ad6_A 240 YAYDPKLNL-FYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA-KWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMT 316 (571)
T ss_dssp CEEETTTTE-EEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE-EEEEESSTTCSSCCCCCCCCE-EEEEEETTEEE
T ss_pred EEEcCCCCe-EEEECCCCccccCCccCCCceeEEEEEEEecCCCcE-EEEecCCCCcccccccCCCCE-EEecccCCcEE
Confidence 566776553 5555432 3699999999776 444432 1 1222 123334664
Q ss_pred cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC---------CCceEE--------------EecCccc--cEEEEEEccC
Q psy4571 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDG---------PPELLF--------------IHGGHTA--KISDFSWNPN 261 (437)
Q Consensus 207 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~~~~--------------~~~~h~~--~v~~l~~~p~ 261 (437)
.+++.++.+|.+.++|..+++........... ...++. ...+..+ .-..++++|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 35778899999999999988754332111000 000110 0000000 0124677787
Q ss_pred CCeEEEEEe-------------------------------------CCCeEEEEeCCCCCCceeeeeeecccCCceeeee
Q psy4571 262 EPWVICSVS-------------------------------------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA 304 (437)
Q Consensus 262 ~~~~l~s~~-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (437)
.. +++... .+|.|..||+.+++....+.... .......
T Consensus 397 ~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~----~~~~~~~ 471 (571)
T 2ad6_A 397 SR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF----AAWGGTL 471 (571)
T ss_dssp TT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----CCCSBCE
T ss_pred CC-EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC----CccceeE
Confidence 77 333332 35889999999998776665421 1222233
Q ss_pred cCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 305 SPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 305 s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
...+..++.++.++. ++.+|..+|+++-++.-
T Consensus 472 ~t~gg~v~~g~~dg~-----------l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 472 YTKGGLVWYATLDGY-----------LKALDNKDGKELWNFKM 503 (571)
T ss_dssp EETTTEEEEECTTSE-----------EEEEETTTCCEEEEEEC
T ss_pred EECCCEEEEEcCCCe-----------EEEEECCCCCEEEEEeC
Confidence 334566666888887 78999999988876643
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.012 Score=60.25 Aligned_cols=168 Identities=9% Similarity=0.048 Sum_probs=109.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~ 181 (437)
.....|++.+.+++++.+-...+.|.+.++.. .....+ .........|+++|.+.+|+.+-... +.|...++..
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG----~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCC----CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 35678999986667777777788999999873 223333 23345689999999877645544333 7899999876
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
... .......-.....|++.+.+..++++-...+.|...++...... .+....+.-....+|++ .
T Consensus 547 ~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~------------~v~~~~~~l~~P~glav--~ 611 (791)
T 3m0c_C 547 VDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK------------TILEDEKRLAHPFSLAV--F 611 (791)
T ss_dssp CCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EEEECTTTTSSEEEEEE--E
T ss_pred Cce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE------------EEecCCCccCCCCEEEE--e
Confidence 332 22333333567899999887766666666778999998654221 11111111223456666 3
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
+.+++++-...+.|...|..+++....+.
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 44477777788999999988887766654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.002 Score=63.75 Aligned_cols=162 Identities=10% Similarity=0.014 Sum_probs=92.2
Q ss_pred cEEEEEcCCCCCCCCeeeecc--C--------CCCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC-
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDA--H--------TAEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFESHK- 193 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~--h--------~~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~- 193 (437)
.|..+|.++ ++.+-.++. | ..++. +...++|+ .+++.++.+|.+.+.|.++++. +.......
T Consensus 273 ~v~Ald~~t---G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~-~w~~~~~~~ 347 (571)
T 2ad6_A 273 TIWGRDLDT---GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNL-IVAEKVDPA 347 (571)
T ss_dssp EEEEEETTT---CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCE-EEEEESSTT
T ss_pred EEEEEecCC---CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCE-EeeecccCC
Confidence 588899884 444444331 2 12222 23334664 3578899999999999999775 33322110
Q ss_pred ------------Cce--------------------------EEEEEcCCCCcEEEEEe----------------------
Q psy4571 194 ------------DEI--------------------------FQVQWSPHNETILASSG---------------------- 213 (437)
Q Consensus 194 ------------~~v--------------------------~~v~~~p~~~~~l~sg~---------------------- 213 (437)
.++ ..++++|+... ++...
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~-~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT-LYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE-EEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE-EEEEchhccccccccccccccCCcccc
Confidence 111 23578887764 44432
Q ss_pred ---------------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 214 ---------------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 214 ---------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
.+|.|..||+.+++...+ ... ...+.+......+. +++.++.||.++.+
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~--------------~~~-~~~~~~~~~~t~gg-~v~~g~~dg~l~a~ 490 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWT--------------KWE-KFAAWGGTLYTKGG-LVWYATLDGYLKAL 490 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEE--------------EEE-SSCCCSBCEEETTT-EEEEECTTSEEEEE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEE--------------ecC-CCCccceeEEECCC-EEEEEcCCCeEEEE
Confidence 346788888777643222 211 11112222223455 56678999999999
Q ss_pred eCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 279 CDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
|.++++.+..+....... ...+.+..+|+.++
T Consensus 491 D~~tG~~lw~~~~~~~~~--~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 491 DNKDGKELWNFKMPSGGI--GSPMTYSFKGKQYI 522 (571)
T ss_dssp ETTTCCEEEEEECSSCCC--SCCEEEEETTEEEE
T ss_pred ECCCCCEEEEEeCCCCcE--eeeEEEEECCEEEE
Confidence 999999988877532111 12234456776443
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.006 Score=60.93 Aligned_cols=162 Identities=5% Similarity=0.006 Sum_probs=109.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|++.++.++.+-..++.|..+++... .....+.........+++.+.+.++..+-...+.|.+.+++....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGS---ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCC---CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 46689999966666767667889999998732 222222222245778999988777667777788999999976432
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEE-eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASS-GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.......-.....+++.|....++.+- +..+.|...++..... ..+ . ..-.....|++.++++
T Consensus 115 -~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~------------~~l--~-~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 115 -QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER------------TTL--V-PNVGRANGLTIDYAKR 178 (628)
T ss_dssp -EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------------EEE--E-CSCSSEEEEEEETTTT
T ss_pred -EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce------------EEE--E-CCCCCcceEEEccccC
Confidence 222223335578999999766556554 2356788888765421 111 1 2234678999999887
Q ss_pred eEEEEEeCCCeEEEEeCCCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
.+.++-...+.|...|+.....
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEEECCCCEEEEEcCCCCce
Confidence 6777777889999999976543
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.018 Score=59.25 Aligned_cols=257 Identities=9% Similarity=-0.014 Sum_probs=143.9
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCC--------------------ceeEEEecCCCCeEEEecCceEEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP--------------------FLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~--------------------~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+....|.+++.. +++. |-.|..++-+..++...+ .+..+.....+..-.+..++.+..
T Consensus 310 l~~~~v~~i~~D-~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~ 387 (781)
T 3v9f_A 310 LSNASARYIFQD-SFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINV 387 (781)
T ss_dssp BSSSCEEEEEEC-SSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEE
T ss_pred CCCCeEEEEEEe-CCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEE
Confidence 344568888888 6665 445665555666654322 233343333333334444556777
Q ss_pred EEeeeccccc-------cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCeEEEEEeCCC
Q psy4571 92 FEIIFTQNFP-------FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEVNCLSFNPYS 161 (437)
Q Consensus 92 ~~~~~~~~~~-------~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~ 161 (437)
++........ ....|.++...+ ++.+. .|+.++-|..+|..++ + ...+. .....|.++...+++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~---~-~~~~~~~~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLW-FGTYLGNISYYNTRLK---K-FQIIELEKNELLDVRVFYEDKNK 461 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECT-TSCEE-EEETTEEEEEECSSSC---E-EEECCSTTTCCCCEEEEEECTTS
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECC-CCCEE-EEeccCCEEEEcCCCC---c-EEEeccCCCCCCeEEEEEECCCC
Confidence 7744322111 123567777766 34444 5777667888887632 1 22221 234579999888877
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccC-----CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESH-----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
. |..|+. +-|..+|..+.+. ....... ...|.++...++|. +..|+.++-+..+|..+.....-
T Consensus 462 ~--lwigt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~----- 530 (781)
T 3v9f_A 462 K--IWIGTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTPDMQLVRKF----- 530 (781)
T ss_dssp E--EEEEET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECTTCCEEEEE-----
T ss_pred C--EEEEEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeCCCCeEEEc-----
Confidence 6 555666 5588899887443 1111111 35789999999887 34455544477788765321110
Q ss_pred CCCCceEEEec-CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee-cccCCceeeeecCCCCccccc
Q psy4571 237 DGPPELLFIHG-GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-IRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 237 ~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~s~ 314 (437)
.... -....|.++...++|. +. .++.+|.+..||..+++. ..+.... .....+..+...++|.+.+++
T Consensus 531 -------~~~~~l~~~~i~~i~~d~~g~-lW-i~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 531 -------NQYEGFCSNTINQIYRSSKGQ-MW-LATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp -------CTTTTCSCSCEEEEEECTTSC-EE-EEETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred -------cCCCCCCCCeeEEEEECCCCC-EE-EEECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 0000 1134689999988888 44 344477658899877643 3332211 112234445667788877765
Q ss_pred CCCC
Q psy4571 315 SPTP 318 (437)
Q Consensus 315 s~d~ 318 (437)
..|
T Consensus 601 -~~G 603 (781)
T 3v9f_A 601 -NTG 603 (781)
T ss_dssp -SSC
T ss_pred -CCc
Confidence 344
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0066 Score=62.57 Aligned_cols=194 Identities=9% Similarity=-0.033 Sum_probs=110.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..|.++...+ ++.+ -.|+.++-|..||..+................|.++...+++. |..|+.++-|..+|.++++
T Consensus 363 ~~v~~i~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDG-QGKL-WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECT-TSCE-EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE
T ss_pred cceEEEEEcC-CCCE-EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc
Confidence 3577787776 3444 4566566688888763211000000012346799999888776 6668877789999987644
Q ss_pred eeeeEec---cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 184 LKLHSFE---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 184 ~~~~~~~---~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
...+. .....|.++...+++. +..|+. +-|..+|..+......... . . .......|.++...+
T Consensus 439 --~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~~~~~-~--~------~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 439 --FQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVIHHYDT-S--N------SQLLENFVRSIAQDS 504 (781)
T ss_dssp --EEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCCEEECT-T--T------SSCSCSCEEEEEECT
T ss_pred --EEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEEecccC-c--c------cccccceeEEEEEcC
Confidence 23332 1346789999888886 444555 5688899876432111000 0 0 001135789999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCCCCc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+|. +. .|+.++-+..+|..+++. ..+... ......+..+...++|.+.++.. .|.
T Consensus 505 ~g~-lW-igt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 505 EGR-FW-IGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp TCC-EE-EEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEET-TEE
T ss_pred CCC-EE-EEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCc
Confidence 888 44 445434477788776532 222211 11122334456677888766554 554
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0045 Score=61.38 Aligned_cols=61 Identities=8% Similarity=-0.151 Sum_probs=41.5
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.+|.+..||+.+++.+....... ..........+.+++.++.|+. ++.+|..+|+++-++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagg~vf~gt~dg~-----------l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTLDGY-----------LKARDSDTGDLLWKFK 511 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCC----CccCcceEecCCEEEEECCCCe-----------EEEEECCCCCEEEEee
Confidence 35789999999998776665321 1111223345666777888887 7888999998876653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0027 Score=65.04 Aligned_cols=195 Identities=9% Similarity=0.060 Sum_probs=107.0
Q ss_pred eeEEEec-CCCCeEEEecC--c----eEEEEEeeec-cccc--cCCCcceEEeeCCCCCEEEEEECC-----CcEEEEEc
Q psy4571 69 LYDLVVN-NYVANISCILN--I----SILFFEIIFT-QNFP--FPLSRQDVAWHLLHESLFGSVADD-----QKLMIWDT 133 (437)
Q Consensus 69 ~~~~~~~-~~~~~i~~~~~--~----~i~~~~~~~~-~~~~--~~~~v~~~~~sp~~~~~l~~~~~d-----g~v~vwd~ 133 (437)
+....++ +++..++...+ | .|.++|+..+ +... .......++|+|+ ++.|+....+ ..|.++++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspD-g~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPD-HTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSS-TTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecC-CCEEEEEEECCCCCCCEEEEEEC
Confidence 4556778 88877754432 2 4888888776 4222 1223457899995 4444444443 25777887
Q ss_pred CCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCCceee--eEe-ccCCCceEEEEEcCCCCc
Q psy4571 134 RSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNLKLKL--HSF-ESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 134 ~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~~~~~--~~~-~~h~~~v~~v~~~p~~~~ 207 (437)
.++.. .....+. ........+.|+|||++++++... ...|.++|+.++.... ..+ ........++.|+. |..
T Consensus 255 gt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~ 332 (751)
T 2xe4_A 255 GKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSH 332 (751)
T ss_dssp TSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTE
T ss_pred CCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCE
Confidence 64321 1122222 223346788999999985555543 3458888988753212 333 23345556666554 555
Q ss_pred EEEEEeCC----CeEEEEEcCCCCCCCCCCCCCCCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCeEE--EEeC
Q psy4571 208 ILASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ--EYCD 280 (437)
Q Consensus 208 ~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~--iwd~ 280 (437)
+++....+ ..|..+|+.+.... .. +. .......+..+.+ .+..++++...|+..+ ++|+
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~-----------~~~li-~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDW-----------SHVLV-DHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCC-----------CCEEE-CCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccc-----------eeeEE-CCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 56665544 35667776542110 11 11 1111123455555 4566788888888655 4554
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0061 Score=57.93 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=79.0
Q ss_pred ceEEEEEeeeccc---cccCCCcceEEeeCCCCC-EEEEEECCC----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 87 ISILFFEIIFTQN---FPFPLSRQDVAWHLLHES-LFGSVADDQ----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 87 ~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~-~l~~~~~dg----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+.|..+|...... .........++|++ +++ ++++...++ .+.+.+... .......+.. ......++++
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g--~~~~~~~l~~-~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRES--GFKVITELTK-GQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGG--TSCSEEEEEE-CSSCCCEEEC
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCC--ceeeeeeecc-CCCceEEEEe
Confidence 5666666432211 11234577899999 566 554443322 233344331 1121122222 2345678899
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
|++.+++++-..++.|..++...... .+.... .......++|+|++++++++-...+.|..++...
T Consensus 235 p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 235 PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 95444666766789999999987443 111221 1234678999999987677777788999988764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0015 Score=65.90 Aligned_cols=256 Identities=8% Similarity=-0.046 Sum_probs=129.1
Q ss_pred EEEeeCC-CcceEEEeeccC-----------ceEeeecCCCceeE--------------EEecCCCCeEEEec--CceEE
Q psy4571 39 RLCVAEP-FDDAVEERVINE-----------EYKIWKKNTPFLYD--------------LVVNNYVANISCIL--NISIL 90 (437)
Q Consensus 39 ~~~~~~~-~~~~l~tgs~d~-----------~v~iw~~~~~~~~~--------------~~~~~~~~~i~~~~--~~~i~ 90 (437)
+.++. + ++++++.|+.+. .+.+||..++.... ......+..+...+ +..+.
T Consensus 190 ~~av~-~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIE-PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEE-TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEE-ecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 56666 5 888999987653 46788865533221 12222222223332 23678
Q ss_pred EEEeeec-----cccccCCCcceEEeeCCCCCEEEEEE-CC-----CcEEEEEcCCCCCCCCe-----eeeccCCCCeEE
Q psy4571 91 FFEIIFT-----QNFPFPLSRQDVAWHLLHESLFGSVA-DD-----QKLMIWDTRSHNVSKPS-----HTVDAHTAEVNC 154 (437)
Q Consensus 91 ~~~~~~~-----~~~~~~~~v~~~~~sp~~~~~l~~~~-~d-----g~v~vwd~~~~~~~~~~-----~~~~~h~~~v~~ 154 (437)
+||.... ..++.++.-.+++..+ ++.+++.|+ .+ ..+.+||+.+.. ...+ ..+..... .
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-W~~~~~~~~~p~~~~~~---~ 343 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKT-WTSLPNAKVNPMLTADK---Q 343 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTE-EEEETTSCSGGGCCCCT---T
T ss_pred EecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCc-ceeCCCccccccccccc---c
Confidence 8875432 2233344445566666 678888888 34 568999997431 1111 00000000 0
Q ss_pred EEEeCCCCcEEEEEeCC---------CeEEEEeCCCCceeeeEeccCC---------CceEEEEEcCCCCcEEEEEeCCC
Q psy4571 155 LSFNPYSEYILATGSAD---------KTVALWDLRNLKLKLHSFESHK---------DEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d---------g~i~lwd~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
..+..++. +++.|+.+ ..+..||..+... ......+. ..-.++.|...+..+++.|+.++
T Consensus 344 ~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 344 GLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp GGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ceeecCCc-eEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 11122333 34555444 4567888887553 22211111 12244555443444788887543
Q ss_pred -----------eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-----------Ce
Q psy4571 217 -----------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-----------NI 274 (437)
Q Consensus 217 -----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-----------g~ 274 (437)
.|.+||..+..-..... . .+.. ...-.+....|+++ +++.|+.+ ..
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~--~--------~mp~-~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFAS--N--------GLYF-ARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEECT--T--------CCSS-CCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCC
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEcc--C--------CCCC-CcccCCeEECCCCC-EEEECCcccCcCcCCCCcccc
Confidence 57777776543211100 0 0000 11112345668888 78788754 56
Q ss_pred EEEEeCCCCCCceeeeeeecccCCce-eeeecCCCCcccccCC
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGI-SSTASPTASSTASESP 316 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~s~~g~~l~s~s~ 316 (437)
+.+||..+.+-.. +.. ........ .+.+.|+|++++.|+.
T Consensus 490 v~~ydp~t~~W~~-~~~-~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQDTFYK-QNP-NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGTEEEE-CCC-CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCCceee-cCC-CCCccccccHhhcCCCcEEEecCCC
Confidence 8999987753221 111 11111222 3355789999999884
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0056 Score=61.08 Aligned_cols=162 Identities=9% Similarity=0.021 Sum_probs=104.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|++.++.++.+=...+.|..+++.... .....+...-.....+++.+.+..++.+-...+.|.+.+++....
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 467899999655566555556788888887321 112233333356899999998777666777789999999986432
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.......-.....|++.|.+.+++.+-- ..+.|...++...... .+ ....-.....|++.++++
T Consensus 119 -~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~------------~l--~~~~~~~P~Glald~~~~ 183 (619)
T 3s94_A 119 -KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------------II--INSEIYWPNGLTLDYEEQ 183 (619)
T ss_dssp -EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------------EE--ECSSCSSEEEEEEETTTT
T ss_pred -EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE------------EE--EeCCCCCCcEEEEEccCC
Confidence 2222233345678999998666666642 2467777776643211 11 112234678999999877
Q ss_pred eEEEEEeCCCeEEEEeCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~ 283 (437)
.+.++-...+.|...|+...
T Consensus 184 ~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 184 KLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEEEETTTCCEEEESSSCC
T ss_pred EEEEEeCCCCeEEEecCCCC
Confidence 67777777889999998754
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0039 Score=57.24 Aligned_cols=192 Identities=10% Similarity=0.080 Sum_probs=107.1
Q ss_pred CcceEEeeCCCCCEEEEE------------ECCCcEEEEEcCCCCC-CCCeeeecc-----CCCCeEEEEEeC--CCC-c
Q psy4571 105 SRQDVAWHLLHESLFGSV------------ADDQKLMIWDTRSHNV-SKPSHTVDA-----HTAEVNCLSFNP--YSE-Y 163 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~------------~~dg~v~vwd~~~~~~-~~~~~~~~~-----h~~~v~~l~~~~--~~~-~ 163 (437)
...+++..| ++..++++ ..+|.|.++|+++... .+.+ .+.+ .......+.+.+ ++. +
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 566777777 44444333 2689999999874311 1122 2222 234677888766 344 4
Q ss_pred EEEEEeC--CCeEEEEeCCCCcee---eeEeccC-CCceEEEEEcCCCCcEEEEEeC-----------------CCeEEE
Q psy4571 164 ILATGSA--DKTVALWDLRNLKLK---LHSFESH-KDEIFQVQWSPHNETILASSGT-----------------DRRLHV 220 (437)
Q Consensus 164 ~l~sgs~--dg~i~lwd~~~~~~~---~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~-----------------dg~i~v 220 (437)
++++-.. +.+|.+|+++..... +..+.+. -...+.+++.++|. ++++... .|.|.-
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 4555444 567888877653321 2223221 23578999999997 4666531 133444
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
+|. ++. + .....-...+.++|+||++.+.++-+..+.|..|++.....+....... ....+-
T Consensus 208 ~d~--~~~------------~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PD 269 (355)
T 3sre_A 208 YSP--NDV------------R---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVD 269 (355)
T ss_dssp ECT--TCC------------E---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEE
T ss_pred EEC--CeE------------E---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCc
Confidence 443 110 1 1112223568999999999777777888999999987432222211111 122333
Q ss_pred eeeecC-CCCcccccCCC
Q psy4571 301 SSTASP-TASSTASESPT 317 (437)
Q Consensus 301 ~~~~s~-~g~~l~s~s~d 317 (437)
.+++.+ +|.+++++..+
T Consensus 270 Gi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 270 NISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEECTTTCCEEEEEESC
T ss_pred eEEEeCCCCcEEEEecCC
Confidence 456777 58877755433
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0034 Score=59.76 Aligned_cols=158 Identities=8% Similarity=0.044 Sum_probs=94.3
Q ss_pred CcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC---Ce-EEEEeC
Q psy4571 105 SRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---KT-VALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g~-i~lwd~ 179 (437)
....++|+|+ ++..|..+...+.|+.+|+.+ ..+..+.........++++++|. ++++.... .. +...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~----g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN----QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT----TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC----CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4678999984 234444454448899999863 22333434455689999999998 56665422 12 333332
Q ss_pred CCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
.........+. .......++++| ++. ++++-..++.|+.+|..++..... +... +....-..++|
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~-----------~~~~-~~~~~~~~ia~ 280 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEE-----------EVMM-DTKGSNFHIVW 280 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEE-----------EEEC-SCCSSCEEEEE
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEE-----------Eecc-CCCCCcccEEE
Confidence 22111011121 223456788999 554 666666778899999875432111 1111 11122346999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
+|+++++.++-...+.|+.++..
T Consensus 281 dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 281 HPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CTTSSEEEEEETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCCCCEEEEEeCC
Confidence 99998777777788999998876
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0015 Score=62.11 Aligned_cols=159 Identities=10% Similarity=0.100 Sum_probs=98.4
Q ss_pred CcceEEeeC-CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC----eEEEEeC
Q psy4571 105 SRQDVAWHL-LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK----TVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp-~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg----~i~lwd~ 179 (437)
....++++| .++.++ ++...+.|+.+|+.. ..+..+.........++|++++..++++...++ .+...+.
T Consensus 138 ~P~~lavdp~~~g~Ly-v~d~~~~I~~id~~~----~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLY-LVGEQHPTRLIDFEK----EYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEE-EEEBTEEEEEEETTT----TEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEE-EEeCCCcEEEEECCC----CEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 567899998 345444 444448899999873 223333334556889999999996455544322 3444443
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.........+.. ......++++|++.+++++-..++.|..++....... .+..... ......|+|+
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~------------~~~~~~~-~~~P~gia~~ 278 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT------------PLFTIQD-SGWEFHIQFH 278 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE------------EEEECSS-SSCCEEEEEC
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE------------EEEEcCC-CCcceeEEEc
Confidence 321111122222 2345678899944446777767889999998754210 1111211 2346789999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
|+|++++++-..++.|..++...
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEeCCc
Confidence 99997777777889999988764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.012 Score=58.23 Aligned_cols=62 Identities=5% Similarity=-0.096 Sum_probs=43.2
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+|.|..||+.+++......... ..........+.+++.++.|+. ++.+|..+|+++-++...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~-----------l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGY-----------FKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCc-----------EEEEECCCCCEEEEecCC
Confidence 6889999999998776665422 1111222334667777888887 899999999988766443
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.05 Score=54.26 Aligned_cols=163 Identities=5% Similarity=0.050 Sum_probs=106.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEE-eCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG-SADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sg-s~dg~i~lwd~~~~~ 183 (437)
....+++.+.+++++.+-...+.|.+.+++.. .........-.....|++.|...+++.+- +..+.|...+++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~---~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ---HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE 157 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTST---TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCC---cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence 45688888766777777667788999998732 11112223345678999999766544443 225678888887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. ..+...-.....++++++++.++++-...+.|...|+..... +.+. ..-....+|++.. .
T Consensus 158 ~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------------~v~~---~~l~~P~glav~~--~ 218 (628)
T 4a0p_A 158 R--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------------EVIA---DDLPHPFGLTQYQ--D 218 (628)
T ss_dssp C--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEE---ECCSCEEEEEEET--T
T ss_pred e--EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------------EEee---ccCCCceEEEEEC--C
Confidence 2 222233456789999998777677767788999999976422 1111 1222345677754 3
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
+++++-...+.|...|..+++....+
T Consensus 219 ~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 219 YIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEecCCCCEEEEEECCCCCceEEE
Confidence 47777777899999998777655444
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.014 Score=55.42 Aligned_cols=207 Identities=8% Similarity=0.035 Sum_probs=106.8
Q ss_pred eeEEEecCC--CCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECC---C-cEEEEEcCCCCC
Q psy4571 69 LYDLVVNNY--VANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADD---Q-KLMIWDTRSHNV 138 (437)
Q Consensus 69 ~~~~~~~~~--~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~d---g-~v~vwd~~~~~~ 138 (437)
...+++.+. ...+ .+...+.|+.++...+... ........++|+++ ++++++-... . .+...+....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~d-G~lyVad~~~~~~~~gv~~~~~~~~-- 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLN-GDMVVVDDQSSDTNTGIYLFTRASG-- 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTT-CCEEEEECCSCTTSEEEEEECGGGT--
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCC-CCEEEEcCCCCcccceEEEEECCCC--
Confidence 445555552 2333 2222256666665322211 12235789999994 5555544321 1 1333333211
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
......+. .......++++|++.+++++-..++.|+.+|..++......+. +....-..++|+|++++++++-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11111221 2334567889994444566666778999999986543111111 112223579999999866777777889
Q ss_pred EEEEEcCCCCCCCC----CCCCCCCCCce-EEEecCccccEEEEEE---------ccCCCeEEEEEeCCCeEEEEeC
Q psy4571 218 LHVWDLSKIGEEQS----TEDAEDGPPEL-LFIHGGHTAKISDFSW---------NPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 218 i~vwd~~~~~~~~~----~~~~~~~~~~~-~~~~~~h~~~v~~l~~---------~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+.++......... ........... -......-.....+++ .++|. ++++-..++.|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC
Confidence 99988763211100 00000000000 0000001124677898 66666 7777778889999985
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0025 Score=57.36 Aligned_cols=160 Identities=11% Similarity=0.152 Sum_probs=100.4
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCC--CeEEEEE---eCCCCcEEEEEe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTA--EVNCLSF---NPYSEYILATGS------ 169 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~--~v~~l~~---~~~~~~~l~sgs------ 169 (437)
-..+++|++.++.++++.-..|+|..||...+. ...+ .+.+ ... .+..+.| .|+++ ++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~ 90 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFN 90 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTC
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-EEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccc
Confidence 456899998555555555478999999987321 1112 2221 111 3689999 68866 566544
Q ss_pred -------CCCeEEEEeCC---CCceeeeEec--cC-----------CCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCC
Q psy4571 170 -------ADKTVALWDLR---NLKLKLHSFE--SH-----------KDEIFQVQWSPHNETILASSGTD-RRLHVWDLSK 225 (437)
Q Consensus 170 -------~dg~i~lwd~~---~~~~~~~~~~--~h-----------~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~ 225 (437)
.+..|..+|+. +++. +.... .. ......++..++|+ ..++++.. +.|...+...
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTS
T ss_pred ccccccCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCC
Confidence 26789999999 6554 32221 11 12478999999998 58888877 7776666654
Q ss_pred CCCCCCCCCCCCCCCceEEE-e--cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 226 IGEEQSTEDAEDGPPELLFI-H--GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~--~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
... .. ... . .......+.|+++|+|..+++..+ +|.+..+|+.+
T Consensus 169 ~~~-~~-----------~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTV-ST-----------FAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CCE-EE-----------EEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred CEE-ee-----------eeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 311 00 000 0 111223578999999995555545 99999999984
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0058 Score=62.63 Aligned_cols=161 Identities=11% Similarity=0.054 Sum_probs=89.9
Q ss_pred CcceEEee-CCCCCEEEE-EECCC----cEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----Ce
Q psy4571 105 SRQDVAWH-LLHESLFGS-VADDQ----KLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KT 173 (437)
Q Consensus 105 ~v~~~~~s-p~~~~~l~~-~~~dg----~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~ 173 (437)
.+...+|| | ++++||- ...+| .|+++|+.++ +... ..+.. ....++|+|||+.++++...+ ..
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKVSG---TNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCEEE---ECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccccC---ceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 46688999 9 5665554 34343 4999999854 3111 11111 134688999998755554322 36
Q ss_pred EEEEeCCCCcee-eeEec-cCCCceEEEEEcCCCCcEEEEEeC--CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 174 VALWDLRNLKLK-LHSFE-SHKDEIFQVQWSPHNETILASSGT--DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 174 i~lwd~~~~~~~-~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
|..+++.++... ...+. ........+.|+|+|++++++... ...|.++|+.++..... ........
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~----------~~~l~~~~ 318 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT----------LEIVRPRE 318 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC----------EEESSCCC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce----------eEEeecCC
Confidence 888888875421 22222 223446788999999976655543 33588888876421110 00111223
Q ss_pred cccEEEEEEccCCCeEEEEEeCC----CeEEEEeCCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSED----NIMQEYCDST 282 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd~~~ 282 (437)
.....++.|+. |..+++....+ ..|..+|+.+
T Consensus 319 ~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 319 KGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 33445555544 55455555443 4677777765
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.019 Score=57.14 Aligned_cols=162 Identities=8% Similarity=0.015 Sum_probs=101.7
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~ 182 (437)
....+++.+.+++++.+-...+.|.+.+++. .....+ ...-.....|++.|.+.+++.+-. ..+.|...+++..
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG----~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~ 160 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDG----SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 160 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCC----CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC
Confidence 5678999986677777777788999999873 222222 233445778999998776455542 2467777777653
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-...+.+++++++..++++-...+.|...|+........ +.....| ..+|++..+
T Consensus 161 ~~-~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~-----------~~~~~~~---P~gi~~~~~- 224 (619)
T 3s94_A 161 SR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV-----------VKGSLPH---PFALTLFED- 224 (619)
T ss_dssp SC-EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------CCCEEESSS-
T ss_pred ce-EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE-----------EeCCCCC---ceEEEEeCC-
Confidence 32 2222223345789999998776677766778899998876332111 0001122 235666544
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCce
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTK 287 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~ 287 (437)
+++++-..++.|...|..+++...
T Consensus 225 -~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 225 -ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp -EEEEECTTTCSEEEEESSSCCCCE
T ss_pred -EEEEecCCCCEEEEEECCCCcccE
Confidence 467677778889999988776543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.036 Score=53.13 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=71.7
Q ss_pred CcceEEe-------eCCCCCEEEEEECCC-c------EEEEEcCCCCCCC--C-eeeeccCCCCeEEEEEeCCCCcEEEE
Q psy4571 105 SRQDVAW-------HLLHESLFGSVADDQ-K------LMIWDTRSHNVSK--P-SHTVDAHTAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 105 ~v~~~~~-------sp~~~~~l~~~~~dg-~------v~vwd~~~~~~~~--~-~~~~~~h~~~v~~l~~~~~~~~~l~s 167 (437)
....++| +++ +..|+++...+ . |.+.+........ . ...+... .....++.+|++.+++++
T Consensus 187 ~p~~ia~~~~~~~~d~~-G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADE-AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp BEEEEEECCCBTTTBCT-TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCcEEEEeecccccCCC-CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 4788999 994 55444444433 2 6666644311111 0 0122211 234578889977777778
Q ss_pred EeCCCeEEEEeCC-------CCce-------------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 168 GSADKTVALWDLR-------NLKL-------------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 168 gs~dg~i~lwd~~-------~~~~-------------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
-..++.|..+|+. ++.. .+... +.....+.++|+|+|+.++++-.....|+.++...
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 8888999999987 4332 11111 12344689999999986566666778899976643
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0004 Score=70.46 Aligned_cols=166 Identities=8% Similarity=0.047 Sum_probs=100.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~ 182 (437)
....+++.+.++.++++-...+.|.+.++.. .....+ .........|+++|.+.+++++-... +.|...++...
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg----~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSS----CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCC----CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 3567888865666776656678899999873 222222 22224567889999877645544333 67888777642
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....|+++|++..++++-...+.|.++++....... +......-.....|++..
T Consensus 530 ~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~------------~~~~~~~~~~P~glavd~-- 594 (699)
T 1n7d_A 530 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT------------ILEDEKRLAHPFSLAVFE-- 594 (699)
T ss_dssp CC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEE------------ECCCSSSCSSCCCCEEET--
T ss_pred Ce-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEE------------EEecCCcCCCceEeEEEC--
Confidence 22 111112223457899999877777777778899999986532111 111111111223445533
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.+++++....+.|..+|..+++....+
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred CEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 347777777889999998877655544
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.092 Score=48.91 Aligned_cols=205 Identities=14% Similarity=0.199 Sum_probs=135.3
Q ss_pred EEecCCCCeEEEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h 148 (437)
..++|....++--....+.+|++...+++ .++..|.--.|-. .+.|+..+ +..|+-|++.. ...+.+.+..|
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis--~~~l~lVT-~taVyHWsi~~--~s~P~kvFdR~ 145 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEG--ESQPVKMFDRH 145 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEE--TTEEEEEC-SSEEEEEESSS--SCCCEEEEECC
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecC--CCeEEEEc-CCeeEEecccC--CCCchhheecc
Confidence 34566666565556778999998765543 3567777777753 45666655 56799999975 34677777655
Q ss_pred C----CCeEEEEEeCCCCcEEEEEe------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCC--CCcEEEEEeCC-
Q psy4571 149 T----AEVNCLSFNPYSEYILATGS------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH--NETILASSGTD- 215 (437)
Q Consensus 149 ~----~~v~~l~~~~~~~~~l~sgs------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~d- 215 (437)
. ..|..-..+++.++++++|- -.|.+.+|..+... -+.+.+|.+....+.+..+ ...+++-+...
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc--cchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 46777888999998777775 35789999998633 5677888665554444321 12355555543
Q ss_pred --CeEEEEEcCCCC-CCCCCCCCCCCCCceE---EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 216 --RRLHVWDLSKIG-EEQSTEDAEDGPPELL---FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 216 --g~i~vwd~~~~~-~~~~~~~~~~~~~~~~---~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++++|-++.... ..... +.+.+ +..+...+...++..++... ++..-..-|.+++||++++.++..-
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f------~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPF------PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCC------CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEEcCCCccCCCCc------cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeee
Confidence 789999996531 10000 00111 11223355667888898888 7778889999999999999887655
Q ss_pred e
Q psy4571 290 R 290 (437)
Q Consensus 290 ~ 290 (437)
+
T Consensus 297 r 297 (494)
T 1bpo_A 297 R 297 (494)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.063 Score=46.65 Aligned_cols=158 Identities=11% Similarity=0.116 Sum_probs=92.7
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec------cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD------AHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
...+++.+ ++.++++.-.++.+.++++........+.... ......-.++|+|.+.. |.++.+.....+|.+
T Consensus 72 ~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~-L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 72 LETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT-FWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE-EEEEEESSSEEEEEE
T ss_pred hHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCE-EEEEECcCCceEEEE
Confidence 44667766 45555555566788888876432111111111 22345789999999986 555555444445544
Q ss_pred CC--CceeeeEec-------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-Cc
Q psy4571 180 RN--LKLKLHSFE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GH 249 (437)
Q Consensus 180 ~~--~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h 249 (437)
+. ....+.... .+...+..++++|...++++.......+.++|.... .... ..+. +.
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~------------~~L~~g~ 216 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGE------------MSLTKGS 216 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEE------------EECSTTG
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEE------------EEcCCcc
Confidence 31 011122221 123457899999988778888888888999997753 2111 1122 21
Q ss_pred ------cccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 250 ------TAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 250 ------~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
-.....|+|.|+|+ +.++ +.-+.++.+.-
T Consensus 217 ~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 217 RGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFTP 251 (255)
T ss_dssp GGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEEC
T ss_pred CCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEEe
Confidence 12568899999998 5555 56667776654
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0027 Score=60.88 Aligned_cols=171 Identities=12% Similarity=0.098 Sum_probs=99.9
Q ss_pred CcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEE-------eCCCCcEEEEEeCCC
Q psy4571 105 SRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSF-------NPYSEYILATGSADK 172 (437)
Q Consensus 105 ~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~-------~~~~~~~l~sgs~dg 172 (437)
....|+|+|. +++++++-...+.|++.|++. ..+..+.. .......++| ++++.+++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~----~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN----RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT----TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC----CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 3568999993 455666655557788899873 22333321 1235899999 999987444444432
Q ss_pred ------eEEEEeCCCCceee-----eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC-------CCCCCCCCCC
Q psy4571 173 ------TVALWDLRNLKLKL-----HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS-------KIGEEQSTED 234 (437)
Q Consensus 173 ------~i~lwd~~~~~~~~-----~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~-------~~~~~~~~~~ 234 (437)
.|.+.+........ ..+... .....++++|++.+++++-..++.|..+|+. ++........
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 36666644311101 122222 2345788999766677787788899999997 4332000000
Q ss_pred CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 235 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...+..+.+... +.......|+|+|+|+.+.++-.....|+.++..
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 000000112222 2234467899999999666676788899996654
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00025 Score=53.58 Aligned_cols=54 Identities=37% Similarity=0.596 Sum_probs=48.2
Q ss_pred ccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 366 NSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 366 ~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
...|.++.+++..|...|..+.. .-|.|+|..++.+|.+++||-++|.+||+..
T Consensus 22 ~~~W~it~ee~~~y~~iF~~lD~-------~dG~Isg~elr~~~~~sgLp~~~L~~Iw~la 75 (121)
T 3fia_A 22 LDTWAITVEERAKHDQQFHSLKP-------ISGFITGDQARNFFFQSGLPQPVLAQIWALA 75 (121)
T ss_dssp TTTSCCCHHHHHHHHHHHHHTCC-------BTTBEEHHHHHHHHGGGCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC-------CCCeECHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45899999999999999998873 3489999999999999999999999999764
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.13 Score=46.57 Aligned_cols=186 Identities=8% Similarity=-0.016 Sum_probs=94.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE-EEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV-ALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i-~lwd~~~~~ 183 (437)
.+.++.|+| +..+++ +..|.|.. ..+.+...+.+.....+.+.+..+.+.+++. +++++ .+|.| +-.| .++
T Consensus 81 ~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~S~D--gG~ 152 (327)
T 2xbg_A 81 RFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-NVGAIYRTKD--SGK 152 (327)
T ss_dssp EEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE-TTCCEEEESS--TTS
T ss_pred cEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-EEEEe-CCccEEEEcC--CCC
Confidence 467788876 345554 44564433 2222222222221112345678888877665 45554 45654 3222 222
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE-EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV-WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v-wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.=......+...+..+++.|++. +++.+ .+|.+.. .|-. +.. ...+ .......+..+.+.+++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~g-G~t-----------W~~~--~~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPG-QTA-----------WEPH--NRTTSRRLHNMGFTPDG 216 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTT-CSS-----------CEEE--ECCSSSCEEEEEECTTS
T ss_pred CCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCC-CCc-----------eeEC--CCCCCCccceeEECCCC
Confidence 10112234556789999999886 46555 4555443 3321 111 1111 12334568889999998
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
. ++ .++.+|.+++.+...++.-..+... .........+++.+++.+++.+..
T Consensus 217 ~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 217 R-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp C-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred C-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 7 44 4556788877643323221111111 001123455677788887777653
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.066 Score=49.08 Aligned_cols=192 Identities=10% Similarity=0.106 Sum_probs=103.9
Q ss_pred CcceEEeeCC--CCCEEEEE-EC--CCcEEEEEcCCCCC-CCCeeeeccC-CCCeEEEEEeCCCCcEEEEEe--------
Q psy4571 105 SRQDVAWHLL--HESLFGSV-AD--DQKLMIWDTRSHNV-SKPSHTVDAH-TAEVNCLSFNPYSEYILATGS-------- 169 (437)
Q Consensus 105 ~v~~~~~sp~--~~~~l~~~-~~--dg~v~vwd~~~~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs-------- 169 (437)
....+.+.++ +...|+++ .. +..|.+|+++.... ...+..+.+. -...+++.+.++|.. .++..
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCccc
Confidence 4556666552 22234333 32 46788888764321 1222333322 246899999999983 66543
Q ss_pred ---------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 170 ---------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 170 ---------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
..|.|.-+|.. + ...+...-...+.++|+|++++++++-+..+.|..|++........
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~--~--~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~--------- 258 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPN--D--VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP--------- 258 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTT--C--CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE---------
T ss_pred ccchhhccCCccEEEEEECC--e--EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec---------
Confidence 12455555543 2 2222222345689999999998777777789999999974321111
Q ss_pred ceEEEecCccccEEEEEEcc-CCCeEEEEEeCC-CeEEEEeCCCCCCceeeeeeec-ccCCceeeeecCCCCccccc
Q psy4571 241 ELLFIHGGHTAKISDFSWNP-NEPWVICSVSED-NIMQEYCDSTDSDTKTMRLDSI-RSNGGISSTASPTASSTASE 314 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~s~ 314 (437)
...+ ......-.++..+ +|. +.+++..+ +.|..|+..........+.... .....+...+..||+.+...
T Consensus 259 --~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~ 331 (355)
T 3sre_A 259 --LRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGS 331 (355)
T ss_dssp --EEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSE
T ss_pred --CEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEee
Confidence 1112 1235678889999 588 66555534 4455555543222222222211 12333444566677765443
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.026 Score=50.83 Aligned_cols=157 Identities=6% Similarity=0.016 Sum_probs=96.9
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc----CC--CceEEEEE---cCCCCcEEEEEe------
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES----HK--DEIFQVQW---SPHNETILASSG------ 213 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~----h~--~~v~~v~~---~p~~~~~l~sg~------ 213 (437)
..-.-+++|++....++++.-..++|..||...+......+.. .. ..+..+.| .|+++ ++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccc
Confidence 3344578999866654555557999999999854431222222 11 13589999 68875 566443
Q ss_pred -------CCCeEEEEEcC---CCCCCCCCCCCCCCCCceEEEecCc-----------cccEEEEEEccCCCeEEEEEeCC
Q psy4571 214 -------TDRRLHVWDLS---KIGEEQSTEDAEDGPPELLFIHGGH-----------TAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 214 -------~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~h-----------~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.+..|..+|+. +++.... ..+... ......++..++|+ ..++++..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~------------~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~ 157 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWS------------VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALG 157 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEE------------EESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEES
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEE------------ecCccccccccccccccccCCceeEECCCCC-EEEeCCCC
Confidence 26789999998 5443221 111111 12488999999999 67788877
Q ss_pred -CeEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccCCCCcc
Q psy4571 273 -NIMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 273 -g~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+.|...+.... ....+..... ...+..-++++|+|..|+.....+.+
T Consensus 158 ~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 158 MPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp SCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSE
T ss_pred CCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeE
Confidence 88777776643 3333322111 11234466999999988777667663
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.18 Score=45.82 Aligned_cols=154 Identities=11% Similarity=0.185 Sum_probs=94.0
Q ss_pred CCcEEEEEcCCCCCCCCeeeecc------CC-CCeEEEEE--eCC-CCcEEEEEeCCCeEEEEeCCC---C---ceeeeE
Q psy4571 125 DQKLMIWDTRSHNVSKPSHTVDA------HT-AEVNCLSF--NPY-SEYILATGSADKTVALWDLRN---L---KLKLHS 188 (437)
Q Consensus 125 dg~v~vwd~~~~~~~~~~~~~~~------h~-~~v~~l~~--~~~-~~~~l~sgs~dg~i~lwd~~~---~---~~~~~~ 188 (437)
+++|.+|++... ...+..+.. .. ..+..+++ +|. +...+++...+|.+..|++.. + ...+++
T Consensus 98 ~n~l~vf~iDp~--~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDGK--NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECTT--TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECCC--CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 578999977421 122433311 11 45667777 774 443377788889999998842 1 122445
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCc-cccEEEEEE--ccCCC-
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGH-TAKISDFSW--NPNEP- 263 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~--~p~~~- 263 (437)
+. ....+..+...+...+ |..+-.|.-|..++.+...... ...+... .++ ...+..|++ .++++
T Consensus 176 f~-lgsq~EgcvvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~---------~~~v~~~~~g~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 176 FK-MNSQTEGMAADDEYGR-LYIAEEDEAIWKFSAEPDGGSN---------GTVIDRADGRHLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp EE-CSSCEEEEEEETTTTE-EEEEETTTEEEEEECSTTSCSC---------CEEEEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred ec-CCCCcceEEEcCCCCe-EEEecccceEEEEeCCcCCCCC---------ceEEEEecCCccccCcceEEEEecCCCCE
Confidence 54 3467888888887764 7788888666666654322111 1223332 122 236888887 56666
Q ss_pred eEEEEEeCCCeEEEEeCC-CCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDS-TDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~ 291 (437)
++++++-.++++.+||.+ +.+.+..+..
T Consensus 245 yLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 245 YLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 678777788999999997 5555555543
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.18 Score=45.65 Aligned_cols=192 Identities=8% Similarity=-0.014 Sum_probs=99.1
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..+.+.+ ++..++++ .+|.| |...+ +..... ....+...+..+++.|++. +++.+...+..+-.|-...
T Consensus 122 ~~~~~i~~~~-~~~~~~~~-~~g~v--~~S~DgG~tW~~--~~~~~~~~~~~~~~~~~~~-~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMIT-NVGAI--YRTKDSGKNWQA--LVQEAIGVMRNLNRSPSGE-YVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TTCCE--EEESSTTSSEEE--EECSCCCCEEEEEECTTSC-EEEEETTSSEEEEECTTCS
T ss_pred CCeEEEEEEC-CCCEEEEe-CCccE--EEEcCCCCCCEE--eecCCCcceEEEEEcCCCc-EEEEECCCcEEEEeCCCCC
Confidence 4566777766 35555544 56654 33222 112222 2234556789999999887 3665544444444443111
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~ 261 (437)
..... -......+..+++.|++. ++ .++.+|.+++.+...+..-.... .. ..+...+.++.+.++
T Consensus 195 tW~~~-~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~-----------~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 195 AWEPH-NRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELL-----------SPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp SCEEE-ECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCB-----------CTTSSCCSCEEEEEESSS
T ss_pred ceeEC-CCCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEecc-----------CCcccCCcceEEEEecCC
Confidence 11111 123456788999999886 34 45567888776432221111100 00 012235788999988
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+. +++. +.+|.+ .+....++.-..+............+.+.+++..++.| .++.+
T Consensus 261 ~~-~~~~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i 315 (327)
T 2xbg_A 261 NE-VWLA-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG-QKGIL 315 (327)
T ss_dssp SC-EEEE-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC-STTEE
T ss_pred CE-EEEE-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc-CCceE
Confidence 77 5544 456766 45555554333332111112334556676666655554 45553
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.027 Score=55.68 Aligned_cols=52 Identities=6% Similarity=-0.032 Sum_probs=35.4
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES 315 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s 315 (437)
.+. +++.++.|+.++.||.++|+.+..+..... .....+.+..+|+ ++++.+
T Consensus 496 agg-lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g--~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 496 AGN-LVFTGTGDGYFKAFDAKSGKELWKFQTGSG--IVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCCEEEEETTEEEEEEEE
T ss_pred CCC-EEEEECCCCcEEEEECCCCCEEEEecCCCC--cccCceEEEECCEEEEEEEc
Confidence 355 677799999999999999999888875321 1122245667886 444443
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.017 Score=57.23 Aligned_cols=206 Identities=7% Similarity=-0.031 Sum_probs=104.4
Q ss_pred CEEEEEEC-CCcEEEEEc-CCCCCCCCeeeeccCCC-----------CeEEEEEeCCCCc---EEEEEeCCCeEEEEeCC
Q psy4571 117 SLFGSVAD-DQKLMIWDT-RSHNVSKPSHTVDAHTA-----------EVNCLSFNPYSEY---ILATGSADKTVALWDLR 180 (437)
Q Consensus 117 ~~l~~~~~-dg~v~vwd~-~~~~~~~~~~~~~~h~~-----------~v~~l~~~~~~~~---~l~sgs~dg~i~lwd~~ 180 (437)
..+.+++. ++.|.-+|. .+ ++.+-....... ....++++|.+.. .++.++.|+.|.-+|.+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~t---G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDP---GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCT---TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEeCCCC---CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 34445555 677777887 63 333333321110 0122445443331 27788899999999999
Q ss_pred CCceeeeEeccCC----CceEE-EEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCCCC------CC---
Q psy4571 181 NLKLKLHSFESHK----DEIFQ-VQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAEDG------PP--- 240 (437)
Q Consensus 181 ~~~~~~~~~~~h~----~~v~~-v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~------~~--- 240 (437)
+++. +....... ..+.+ -.. .++ . ++.++ .++.|+.+|.++++..-+....... +.
T Consensus 140 TG~~-~W~~~~~~~~~~~~~~ssP~v-~~g-~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~ 215 (599)
T 1w6s_A 140 TGET-VWKVENSDIKVGSTLTIAPYV-VKD-K-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNI 215 (599)
T ss_dssp TCCE-EEEEECCCGGGTCBCCSCCEE-ETT-E-EEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred CCCE-EEeecCCCCCccceeecCCEE-ECC-E-EEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 9876 33332111 01111 111 134 2 44444 3799999999988754331110000 00
Q ss_pred --c--------------eEEEecCccccEEEEEEccCCCeEEEEEeCC----------------CeEEEEeCCCCCCcee
Q psy4571 241 --E--------------LLFIHGGHTAKISDFSWNPNEPWVICSVSED----------------NIMQEYCDSTDSDTKT 288 (437)
Q Consensus 241 --~--------------~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~ 288 (437)
. .... .+-...-..+++.+... ++..+..+ +.|..+|.++|+....
T Consensus 216 ~~~~~g~~~~g~~tw~g~~~~-~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 216 KNPHYGQKGLGTGTWEGDAWK-IGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TCGGGCCTTHHHHTSSTTGGG-GCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccCCCccee-cCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 0 0000 00000011345666666 55566554 4899999999988776
Q ss_pred eeeeecc------cCCceeeeec-CCC---CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 289 MRLDSIR------SNGGISSTAS-PTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 289 ~~~~~~~------~~~~~~~~~s-~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
+...... ....+..... .+| ..++.++.++. +.+.|..+|+.+
T Consensus 294 ~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~-----------l~~lD~~tG~~l 346 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI-----------VYTLDRTDGALV 346 (599)
T ss_dssp EESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE-----------EEEEETTTCCEE
T ss_pred eecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE-----------EEEEECCCCCEe
Confidence 6542210 0011111222 567 46777888887 555566666554
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.36 Score=44.90 Aligned_cols=154 Identities=10% Similarity=0.157 Sum_probs=93.6
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC----CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce------
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH----TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL------ 184 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~------ 184 (437)
++..++.+- ++.||.-++.... ..+.++.. -..|..+..+|+|.+ ||.. .+..|.|-.+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~---~Yk~L~~~~~i~f~~i~qlvlSpsG~l-LAl~-g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDS---LYHSLNFSRHLVLDDTFHVISSTSGDL-LCLF-NDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCS---SCEEEECTTTCCCCTTCEEEECTTSSE-EEEE-CSSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCC---cceEEecCcccccCceeEEEECCCCCE-EEEe-cCCeEEEEEecCccccCcccc
Confidence 455555443 5788888887432 23333322 236788999999994 6555 456899988873221
Q ss_pred -----eeeEecc------CCCceEEEEEcCCCCc--EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 185 -----KLHSFES------HKDEIFQVQWSPHNET--ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 185 -----~~~~~~~------h~~~v~~v~~~p~~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
....+.- ...+|..+.|||-+.. .|++-..|+.|++||+........... .....+-......
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~----k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLN----KPNNSFGLDARVN 180 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEES----CCCSEEESCSSCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchh----ccccccCCCcccc
Confidence 1112221 2467999999996533 577888899999999987432211000 0011123334446
Q ss_pred cEEEEEEccCCCeEEEE--EeCCCeEEEEe
Q psy4571 252 KISDFSWNPNEPWVICS--VSEDNIMQEYC 279 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s--~~~dg~i~iwd 279 (437)
.|.+++|.+++- .|.. ...+|.|+-..
T Consensus 181 ev~S~~Fg~~~l-TLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 181 DITDLEFSKDGL-TLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp CEEEEEECTTSS-CEEEEECTTSCEEEEES
T ss_pred eEEEEEEcCCCc-EEEEEecCCCCCEEEEC
Confidence 899999999765 3444 34778877553
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.11 Score=47.18 Aligned_cols=151 Identities=11% Similarity=0.173 Sum_probs=92.6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC----CCc--EEEEEeC---CCeEEEEeCCCCceee
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY----SEY--ILATGSA---DKTVALWDLRNLKLKL 186 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~~~--~l~sgs~---dg~i~lwd~~~~~~~~ 186 (437)
..+++...+.+-+.+||+. ++.+..+.. +.++.+..-|. |+. ++++... +++|.+|++......+
T Consensus 40 ~s~ii~t~k~~gL~Vydl~----G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD----GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GCEEEEEETTTEEEEEETT----SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred ccEEEEEcCCCCEEEEcCC----CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 4566667778889999995 566666643 56788887763 111 2333333 5789999774222224
Q ss_pred eEecc------CC-CceEEEEE--cCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 187 HSFES------HK-DEIFQVQW--SPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 187 ~~~~~------h~-~~v~~v~~--~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
..+.. .. ..++.+++ +|. +...++....+|.+..|++.....-.. ..+.++.+.- .+.+..+
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~-------~~~lVR~f~l-gsq~Egc 185 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI-------SGKKVRAFKM-NSQTEGM 185 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE-------EEEEEEEEEC-SSCEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc-------cceEEEEecC-CCCcceE
Confidence 44421 11 55677888 774 443466677889999999853211100 1144555544 3467788
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...+... .|..+-.|.-|..++.+
T Consensus 186 vvDd~~g-~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 186 AADDEYG-RLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEETTTT-EEEEEETTTEEEEEECS
T ss_pred EEcCCCC-eEEEecccceEEEEeCC
Confidence 8888777 56678787667666754
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.54 Score=43.03 Aligned_cols=206 Identities=7% Similarity=-0.002 Sum_probs=99.4
Q ss_pred CCcceEEeeCC---CCCEEEEEECC-----CcEEEEEcCCCCC--CCC-eeeec---cCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 104 LSRQDVAWHLL---HESLFGSVADD-----QKLMIWDTRSHNV--SKP-SHTVD---AHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 104 ~~v~~~~~sp~---~~~~l~~~~~d-----g~v~vwd~~~~~~--~~~-~~~~~---~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.....++|+|+ ++.++++-... +.|..++...... .+. +..+. +.......++|.|+|. +.++-+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEEC
Confidence 35678999994 34555544432 5677787763210 011 11122 1111236899999996 455533
Q ss_pred C-------------CCeEEEEeCCCC------------ceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeE-----
Q psy4571 170 A-------------DKTVALWDLRNL------------KLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRL----- 218 (437)
Q Consensus 170 ~-------------dg~i~lwd~~~~------------~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i----- 218 (437)
. .|.|.-++.+.. ........++ .....++|+| ++. ++++-.....+
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~ 231 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGH 231 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCC-EEEEEECC------CC
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCC
Confidence 2 256666665430 0101111233 2357789999 555 55544333321
Q ss_pred -EEEEcCCCCCCC----CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce---eee
Q psy4571 219 -HVWDLSKIGEEQ----STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK---TMR 290 (437)
Q Consensus 219 -~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~ 290 (437)
.+.-+..+...- .-.........++..+..| .....++| .+|. ++++.-..+.|...+++...... ...
T Consensus 232 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~-~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~ 308 (352)
T 2ism_A 232 DEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG-FPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVLRVE 308 (352)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC-CCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC-CCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeecchh
Confidence 233233222100 0000000001223333333 35677888 4665 67676677888888876543211 011
Q ss_pred eeecccCCceeeeecCCCCcccccC
Q psy4571 291 LDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
........+..+++.|||.+.++..
T Consensus 309 ~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 309 TALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eecccCCCeeEEEECCCCcEEEEEe
Confidence 0001223566778999998766654
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.79 Score=42.77 Aligned_cols=230 Identities=12% Similarity=0.131 Sum_probs=140.0
Q ss_pred eEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
.+.+-|+...... ..+....+.-.+| ..+.+|.-. ..++.|+|++ ....++...- ..+|.--.|-.+.. |+
T Consensus 49 ~vvIiDl~~~~~~~rrpi~AdsAIMnP-~~~iiALra-g~~lQiFnle---~K~klks~~~-~e~VvfWkWis~~~--l~ 120 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIE---MKSKMKAHTM-TDDVTFWKWISLNT--VA 120 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECS-SSSCEEEEE-TTEEEEEETT---TTEEEEEEEC-SSCCCEEEEEETTE--EE
T ss_pred eEEEEECCCCCcceecccccceeeeCC-CCcEEEEec-CCeEEEEchH---Hhhhhcceec-CCCceEEEecCCCe--EE
Confidence 4556665543332 2344555677788 567776655 7899999998 3344544433 34677777765443 44
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCC----CceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
-.+ +..|.-|++.....|...+..|. ..|..-..+++.++++++|- -.|.+.+|..+...
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--------- 190 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--------- 190 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC---------
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc---------
Confidence 443 56899999987666677776553 45777788899998776663 24678888887632
Q ss_pred CCCCceEEEecCccccEEEEEEccCC--CeEEEEEeCC---CeEEEEeCCCC---CC---ceeeeeee---cccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNE--PWVICSVSED---NIMQEYCDSTD---SD---TKTMRLDS---IRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~--~~~l~s~~~d---g~i~iwd~~~~---~~---~~~~~~~~---~~~~~~~~~ 302 (437)
-+.++||......+....+. ..+++.+... +.+++-++... .+ .+...... ...+-++.+
T Consensus 191 ------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 191 ------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp ------EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred ------cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence 35578887665554443211 2355544433 78999888543 11 11111111 123345556
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEES 352 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~ 352 (437)
..|+.-..+..-+.-|. ++++|+.||.++..-.-..+.+
T Consensus 265 qvs~kygviyviTK~G~-----------i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp EEETTTTEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSCE
T ss_pred EecccCCEEEEEecCce-----------EEEEecccceeeeeecccCCce
Confidence 66777776666666666 8999999998875443333333
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.24 Score=45.45 Aligned_cols=119 Identities=8% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce-eeeEec---cCCCceEEEEEcCC---CCcEEEEEeCC-----Ce
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL-KLHSFE---SHKDEIFQVQWSPH---NETILASSGTD-----RR 217 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~---~h~~~v~~v~~~p~---~~~~l~sg~~d-----g~ 217 (437)
.....++|.|+|. ++.+..+|.|.+++ ++.. .+..+. ........++++|+ +..++++-..+ +.
T Consensus 31 ~~P~~ia~~pdG~--l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGG--MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSC--EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCe--EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3568999999997 44556779999998 3232 121111 12356799999998 55555555433 57
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEE-ec---CccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeC
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFI-HG---GHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCD 280 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~---~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~ 280 (437)
|..++........ .+.+.. +. +.......++|.|+|. +.++.+. .|.|.-++.
T Consensus 107 v~r~~~~~~~~~~---------~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 107 VVRLRHLGERGVL---------DRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp EEEEEECSSCEEE---------EEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred EEEEEeCCCCcCc---------eEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 8888876431100 011111 22 1111236899999997 6666432 256666666
Q ss_pred CC
Q psy4571 281 ST 282 (437)
Q Consensus 281 ~~ 282 (437)
..
T Consensus 177 dG 178 (352)
T 2ism_A 177 EG 178 (352)
T ss_dssp TS
T ss_pred CC
Confidence 53
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.14 Score=43.00 Aligned_cols=105 Identities=9% Similarity=0.072 Sum_probs=60.7
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe---eeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS---HTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~---~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+.+++|+| ++.+.++ .+|.+.-.+..+.....-. ..+- +.. .-.++.|.|+|. +.++ .||.|.-++.
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~-LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGY-LYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCC-EEEe--CCCEEEEeCC
Confidence 566999999 7777776 6777666665432111100 0110 111 137889999997 3444 5699988876
Q ss_pred CCCceee-----eEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 180 RNLKLKL-----HSF-ESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 180 ~~~~~~~-----~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
.+....- ..+ ..-=..+..|.+.|+|. +. +.. |+.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Ly-av~-dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LY-AVH-GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EE-EEE-TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCce-EE-EEe-CCcEE
Confidence 4322110 011 10114679999999996 44 444 88754
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.01 E-value=0.44 Score=51.23 Aligned_cols=207 Identities=14% Similarity=0.189 Sum_probs=127.0
Q ss_pred EecCCCCeEEEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-
Q psy4571 73 VVNNYVANISCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH- 148 (437)
Q Consensus 73 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h- 148 (437)
+++|....++--...++.+|++....++ .++..|.--.|-. .+.|+..+ +..|.-|++.. ...+.+.+..|
T Consensus 72 IMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~--~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 72 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEG--ESQPVKMFDRHS 146 (1630)
T ss_pred ccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecC--CCeeEEEc-CCeEEEeccCC--CCccHHHHhcch
Confidence 3455555555556678999998765544 3456666666643 45665555 45799999974 33555555555
Q ss_pred ---CCCeEEEEEeCCCCcEEEEEe------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEc--CCCCcEEEEEeC---
Q psy4571 149 ---TAEVNCLSFNPYSEYILATGS------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNETILASSGT--- 214 (437)
Q Consensus 149 ---~~~v~~l~~~~~~~~~l~sgs------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~--p~~~~~l~sg~~--- 214 (437)
...|..-.-+++.++++++|- -.|.+.+|..+... -+.+.+|.+....+... +....+++.+..
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 346777788899998777765 35889999988632 45667776655444442 222234443332
Q ss_pred CCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 215 DRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 215 dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++|-++... ....... .......+......+...++..++... ++..-+.-|.+.++|++++.++..-+
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~---kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CceEEEEecCCCccCCCCCc---cccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhcc
Confidence 368999998653 1100000 000011111222344556788888777 77778899999999999998775544
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.35 Score=40.66 Aligned_cols=148 Identities=11% Similarity=0.078 Sum_probs=78.6
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCC--eeeeccC--CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKP--SHTVDAH--TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~--~~~~~~h--~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
.+.+|++..+| +++.=.+.......- .....+. -..+.+++|+|+|. +.+. .+|.+.-.+..+... ..+.
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~--~~W~ 76 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN--DNWM 76 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT--CCHH
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc--cccc
Confidence 35677777777 666655543221111 1111122 24678999999887 4555 677766666544221 1111
Q ss_pred cCCCc--------eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 191 SHKDE--------IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 191 ~h~~~--------v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+.... -.++.|.|+|. +.++ .||.|.-++..+.....=+. ....+ -.+-=..+..|.|.|+|
T Consensus 77 ~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~-----~a~~v--g~~gw~~~~~lff~p~G 146 (236)
T 1tl2_A 77 GRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIA-----RATEV--GSGGWSGFKFLFFHPNG 146 (236)
T ss_dssp HHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHH-----HSEEE--ECSSGGGEEEEEECTTS
T ss_pred ccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCceec-----cccEe--ccCCCCceEEEEECCCc
Confidence 11122 37899999996 4555 56988877654322110000 00000 01111467999999999
Q ss_pred CeEEEEEeCCCeEEEEeCC
Q psy4571 263 PWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~ 281 (437)
. +. +.. |+.++-+...
T Consensus 147 ~-Ly-av~-dg~lyr~~~P 162 (236)
T 1tl2_A 147 Y-LY-AVH-GQQFYKALPP 162 (236)
T ss_dssp C-EE-EEE-TTEEEEECCC
T ss_pred e-EE-EEe-CCcEEecCCC
Confidence 8 54 444 8876544433
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.56 E-value=0.64 Score=43.26 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=78.9
Q ss_pred ceEeeecC----CCceeEEEecCCCCeEEEecCceEEEEEeeecc---------------ccc-------cCCCcceEEe
Q psy4571 58 EYKIWKKN----TPFLYDLVVNNYVANISCILNISILFFEIIFTQ---------------NFP-------FPLSRQDVAW 111 (437)
Q Consensus 58 ~v~iw~~~----~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---------------~~~-------~~~~v~~~~~ 111 (437)
..|+++.. -+.+..+..++.+..++..++..|.+-.+..+. .+. .+.+|..+.|
T Consensus 53 ~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW 132 (452)
T 3pbp_A 53 LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF 132 (452)
T ss_dssp SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE
T ss_pred cceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe
Confidence 45555543 224667778888888888888888888754111 011 1356899999
Q ss_pred eCCC--CCEEEEEECCCcEEEEEcCCCCCCCCeeeec---------cCCCCeEEEEEeCCCCcEEEEEe--CCCeEEEE
Q psy4571 112 HLLH--ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---------AHTAEVNCLSFNPYSEYILATGS--ADKTVALW 177 (437)
Q Consensus 112 sp~~--~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~~~~~l~sgs--~dg~i~lw 177 (437)
||.+ +..|++-..|+.|++||+.... .++. .++ .....|.+++|.+++-. |...+ +.|.|.-.
T Consensus 133 HPl~~~ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lT-LYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 133 HPKSYRDSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLT-LYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTBGGGCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSEEESCSSCCCEEEEEECTTSSC-EEEEECTTSCEEEEE
T ss_pred ccccCCCCeEEEEecCCEEEEEEcccCC-CCCc-chhccccccCCCcccceEEEEEEcCCCcE-EEEEecCCCCCEEEE
Confidence 9964 4588899999999999998532 2333 222 22357889999997765 66655 67777654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=95.55 E-value=0.94 Score=48.51 Aligned_cols=222 Identities=10% Similarity=0.055 Sum_probs=114.4
Q ss_pred CeEEEecCceEEEEEee-----eccccccCCCcceEEeeCCCCCEEEEEECC----------------------------
Q psy4571 79 ANISCILNISILFFEII-----FTQNFPFPLSRQDVAWHLLHESLFGSVADD---------------------------- 125 (437)
Q Consensus 79 ~~i~~~~~~~i~~~~~~-----~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---------------------------- 125 (437)
+.+.+..++.+++..+. ..+.++....+..++++|. .+.++.+..+
T Consensus 707 ~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 707 DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEV-SQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp TEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGG-GTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred CcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCC-CCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 44555666678887753 2344566778889999994 4544443311
Q ss_pred ---------------------CcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEe---CCCCcEEEEEe----------C
Q psy4571 126 ---------------------QKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFN---PYSEYILATGS----------A 170 (437)
Q Consensus 126 ---------------------g~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~---~~~~~~l~sgs----------~ 170 (437)
+.|++.|.. ..+.+..+.- ....+.+++.. .+...+|+.|+ .
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~---t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~ 862 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQH---TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPK 862 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETT---TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCC
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCC---CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCC
Confidence 235555655 2333333221 12335555532 23223577776 3
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.|.|.++++...+.....-...+++|++++-- +| +++++. ..+|++|++...+... .....+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i--g~~l~vy~l~~~~~L~-------------~~~~~~~ 925 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI--NSTVRLYEWTTEKELR-------------TECNHYN 925 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE--TTEEEEEEECTTSCEE-------------EEEEECC
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc--CCEEEEEECCCCceEE-------------EEeeccc
Confidence 58899999875443232333457889888754 24 444433 5789999997643111 0011111
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.|..+.....++ +++.|..-..+.+...+.....-..............+.+-.++ .++.+..++.+.+..
T Consensus 926 -~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 926 -NIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQ 996 (1158)
T ss_dssp -CSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEE
T ss_pred -cEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEe
Confidence 122222223456 67677766666665443322111111223333444445554443 455566666655543
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.42 E-value=1.5 Score=41.62 Aligned_cols=112 Identities=12% Similarity=0.190 Sum_probs=62.2
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCcee-eeEecc------CCCceEEEEEcCC---CCcEEEEEeC---
Q psy4571 149 TAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLKLK-LHSFES------HKDEIFQVQWSPH---NETILASSGT--- 214 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~~~-~~~~~~------h~~~v~~v~~~p~---~~~~l~sg~~--- 214 (437)
-.....++|.|+|+ ++++ ... +.|++++..++... +..+.. .......|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG~-l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECTTSC-EEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcCCCc-EEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 34578999999998 4555 455 47988886543321 222221 2456789999996 5555555442
Q ss_pred ---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEE-ec-CccccEEEEEEccCCCeEEEEEe
Q psy4571 215 ---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-HG-GHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 215 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
...|.-++......... ..+.+.. +. ........|+|.|||. +.++.+
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~-------~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLE-------KPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEE-------EEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCCccccccccEEEEEEECCCCCCcC-------CcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 23455565543211000 0112221 21 1122478999999998 555544
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=1.6 Score=39.88 Aligned_cols=203 Identities=8% Similarity=0.016 Sum_probs=99.7
Q ss_pred CcceEEeeCC---CCCEEEEEEC---C----CcEEEEEcCCCCC----CCCe-eeec-cCCCCeEEEEEeCCCCcEEEEE
Q psy4571 105 SRQDVAWHLL---HESLFGSVAD---D----QKLMIWDTRSHNV----SKPS-HTVD-AHTAEVNCLSFNPYSEYILATG 168 (437)
Q Consensus 105 ~v~~~~~sp~---~~~~l~~~~~---d----g~v~vwd~~~~~~----~~~~-~~~~-~h~~~v~~l~~~~~~~~~l~sg 168 (437)
....|+|+|+ ++.++++-+. + +.|..++...... .+.+ ..+. ........++|.|+|. ++++-
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~ 152 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITT 152 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEEC
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEE
Confidence 4678999995 3555544432 2 5677777653210 0111 1121 1111246799999997 45553
Q ss_pred eC-------------CCeEEEEeCCCC--------ceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCC---eEEEEEc
Q psy4571 169 SA-------------DKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSP-HNETILASSGTDR---RLHVWDL 223 (437)
Q Consensus 169 s~-------------dg~i~lwd~~~~--------~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg---~i~vwd~ 223 (437)
+. .|.|.-.+.+.. ...+. ..++.. ...++|+| ++. ++++-...+ .|.+.
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rn-p~Gla~d~~~g~-l~v~d~g~~~~dei~~i-- 227 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRN-PQGIDWHRASGV-MVATEHGPVGHDEVNII-- 227 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSC-CCEEEECTTTCC-EEEEECCSSSCCEEEEE--
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCC-cceEEEeCCCCC-EEEEecCCCCCcEEEEe--
Confidence 32 245666665431 01111 223433 46899999 565 454433222 24333
Q ss_pred CCCCCC----CCCCCCCCCCCceEEEe-cCccccEEEEEEc-------cCCCeEEEEEeCCCeEEEEeCCCCCCceee-e
Q psy4571 224 SKIGEE----QSTEDAEDGPPELLFIH-GGHTAKISDFSWN-------PNEPWVICSVSEDNIMQEYCDSTDSDTKTM-R 290 (437)
Q Consensus 224 ~~~~~~----~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~ 290 (437)
..+... ..-.........++..+ ..| .....++|. .+|. ++++.-..+.|...++......... .
T Consensus 228 ~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~ 305 (354)
T 3a9g_A 228 LKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDNMEVRKIST 305 (354)
T ss_dssp CTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGGGCEEEEEE
T ss_pred cCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCCCcccceee
Confidence 222210 00000000001222333 233 467888884 4565 7777777788988888753222111 1
Q ss_pred eeecccCCceeeeecCCCCcccccC
Q psy4571 291 LDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
........+..+++.|||.+.++..
T Consensus 306 ~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 306 FFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eccCCCCCeeEEEECCCCcEEEEEe
Confidence 1111123466778999998766654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.9 Score=40.15 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=92.2
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCC--CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCC
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNV--SKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~ 182 (437)
++.+++.|+.+ ..+.+||+.+... ...+..+.........+.. ++. +++.|+.+ ..+.++|+.+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCCC
Confidence 45677777654 4688999875421 1222222111112222222 344 67777654 35889998875
Q ss_pred ceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 183 KLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 183 ~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
+.... .+......-..+.+ ++. +++.|+.+ ..+.+||+.+..-... ............+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~------------~~~p~~r~~~~~~ 203 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNV------------TPMATKRSGAGVA 203 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEEE------------CCCSSCCBSCEEE
T ss_pred eEEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcEEeC------------CCCCcccccceEE
Confidence 53211 11111111122222 444 67777654 3588888876532111 0000111111222
Q ss_pred EEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........+..-++++++.|+.++.. ....+
T Consensus 204 ~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~------~~~~v 271 (301)
T 2vpj_A 204 LL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM---TTPRCYVGATVLRGRLYAIAGYDGNS------LLSSI 271 (301)
T ss_dssp EE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSS------BEEEE
T ss_pred EE--CCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCC---CCcccceeEEEECCEEEEEcCcCCCc------ccccE
Confidence 22 444 77777764 4689999987643221111 11111112333467777777655431 11225
Q ss_pred ccccchhh
Q psy4571 332 VLFDILVC 339 (437)
Q Consensus 332 ~~wd~~~~ 339 (437)
.++|..+.
T Consensus 272 ~~yd~~~~ 279 (301)
T 2vpj_A 272 ECYDPIID 279 (301)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCC
Confidence 66666543
|
| >2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.0083 Score=58.72 Aligned_cols=52 Identities=29% Similarity=0.573 Sum_probs=44.2
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccCC
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPDS 427 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~~ 427 (437)
-|.+ .+++..|...|..+. +.-|.++|.+++.+|.+|+||-..|.+||++..
T Consensus 450 ~w~~-~~~~~~y~~~F~~~~-------~~~g~i~g~~a~~~~~~s~Lp~~~L~~IW~l~D 501 (550)
T 2qpt_A 450 EWVV-TKDKSKYDEIFYNLA-------PADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSD 501 (550)
T ss_dssp -CTT-TTTHHHHHHHHHHTC-------CSSSEECHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred CCCC-HHHHHHHHHHHHhcC-------CCCCeecHHHHHHHHHHcCCCHHHHHHHhcccC
Confidence 5875 557888999999887 333899999999999999999999999998753
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.08 E-value=1.8 Score=39.35 Aligned_cols=158 Identities=14% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-eeEe----ccCCCceEEEEEcCC---CCcEEEEE--eCCCeE
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSF----ESHKDEIFQVQWSPH---NETILASS--GTDRRL 218 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~----~~h~~~v~~v~~~p~---~~~~l~sg--~~dg~i 218 (437)
-.....++|.|+|. ++++--..|.|++++...+... +..+ .........++++|+ +..+.++- ..++.|
T Consensus 31 L~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 44678999999998 4555544899999987654421 2111 123456899999996 34444432 244566
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEE-e---cCccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFI-H---GGHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCDS 281 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~-~---~~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~~ 281 (437)
.-|.+........ .....+.+.. + ..| ....|.|.|||. +.++.+. .|.|.-.+..
T Consensus 110 ~R~~~~~~~~~~~----~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 110 VRMLYDEKKPSGE----QLGAPDTVFRGIPKGVIH--NGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp EEEEBCTTSCTTC----CBCCCEEEEEEECCCSSC--CCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred EEEEeCCCCcccc----cCCCcEEEEEcCCCCCCc--cCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 6666654221000 0001122221 2 123 346799999998 6666442 3455555554
Q ss_pred CCC----CceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 282 TDS----DTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 282 ~~~----~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
..- +................++|+|+|.++++-
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 220 000001112223345667889988766654
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.02 E-value=2 Score=39.12 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=41.8
Q ss_pred EEecCccccEEEEEEcc-------CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 244 FIHGGHTAKISDFSWNP-------NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
..+..| .....+.|.. +|. ++++.-..+.|...++..++..............+..+++.|||.+.++.
T Consensus 265 ~~~~~~-~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 265 FYWKDS-PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEESSC-CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEeCCC-cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 334334 4678888864 455 77777778888888887653322222111112356777899999876653
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.83 Score=49.19 Aligned_cols=231 Identities=12% Similarity=0.134 Sum_probs=132.4
Q ss_pred eEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
+|.+.|+...... ..+....+.-.+| ..+.+|.-. ..++.|+|+++ ...+....- ..+|.--.|-.... |+
T Consensus 49 ~vvIidl~~~~~~~rrpi~AdsAIMnP-~~~iiALra-g~~lQiFnl~~---k~klks~~~-~e~VvfWkWis~~~--l~ 120 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIEM---KSKMKAHTM-TDDVTFWKWISLNT--VA 120 (1630)
T ss_pred eEEEEECCCCCCcccccccchhhccCC-CcceEEEec-CCeEEEeehHH---hhhhccccc-CCCceEEEecCCCe--eE
Confidence 4556665544332 2233444566788 466666554 78999999984 333333322 34677777865544 43
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccC----CCceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESH----KDEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
-.+ +..|.-|++.....|...+..| ...|..-..+++.++++++|- -.|.+.+|.......
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-------- 191 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-------- 191 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--------
Confidence 333 4579999997655666556555 456777788899998766663 347788888766422
Q ss_pred CCCCceEEEecCccccEEEEEEc--cCCCeEEEEEeC---CCeEEEEeCCCC-CCceee-----ee---eecccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWN--PNEPWVICSVSE---DNIMQEYCDSTD-SDTKTM-----RL---DSIRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~--p~~~~~l~s~~~---dg~i~iwd~~~~-~~~~~~-----~~---~~~~~~~~~~~ 302 (437)
+.+.||......+... +....+++.+.. .+.++|-++... .....+ .. ......-++.+
T Consensus 192 -------Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~ 264 (1630)
T 1xi4_A 192 -------QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (1630)
T ss_pred -------hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE
Confidence 2356666544443332 122224433322 368888887543 000111 11 11123344555
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
..|+.-..+..-+.-|. +.++|+.||..+..-.-..+.+.
T Consensus 265 ~vs~k~g~iy~itk~G~-----------~~~~d~~t~~~i~~~ris~~~iF 304 (1630)
T 1xi4_A 265 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETIF 304 (1630)
T ss_pred EeccccCEEEEEecCce-----------EEEEecccchhhhhccccCCceE
Confidence 66666666666666666 89999999988755433333333
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.97 Score=41.34 Aligned_cols=152 Identities=8% Similarity=-0.010 Sum_probs=82.9
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec---cCCCceEEEEEcCC---CCcEEEEEeC---C----C
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSPH---NETILASSGT---D----R 216 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~---~h~~~v~~v~~~p~---~~~~l~sg~~---d----g 216 (437)
.....++|.|+|. |+.+..+|.|+++|. ++...+..+. ........++++|+ +..++++-+. + .
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3578999999987 555567799999974 3332222221 12356889999998 5555555442 3 5
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEE-ec-CccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeCC
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFI-HG-GHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCDS 281 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~~ 281 (437)
.|..|+......... ..+.+.. +. +.......|+|.|+|. +.++.+. .|.|.-.+..
T Consensus 106 ~v~r~~~~~~~~~~~-------~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLK-------EVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEEECSSSCCEE-------EEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEEECCCCcCcC-------ccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 677777764310000 0111111 11 1111246799999998 6666432 2456666654
Q ss_pred CCC-------CceeeeeeecccCCceeeeecC-CCCcccccC
Q psy4571 282 TDS-------DTKTMRLDSIRSNGGISSTASP-TASSTASES 315 (437)
Q Consensus 282 ~~~-------~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s 315 (437)
..- ....+ .........++|+| +|.++++-.
T Consensus 178 G~~p~~npf~~~~i~---a~G~rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 178 GRPPADNPFPNSPIW---SYGHRNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp SCCCTTSSSTTCCEE---EECCSCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCCCcEE---EEccCCcceEEEeCCCCCEEEEec
Confidence 320 01111 11233455678999 676655543
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=94.55 E-value=2.9 Score=39.63 Aligned_cols=105 Identities=14% Similarity=0.264 Sum_probs=57.7
Q ss_pred CcceEEeeCCCCCEEEEEECC-CcEEEEEcCCCCCCCCeeeecc------CCCCeEEEEEeCC---CCcEEEEEeC----
Q psy4571 105 SRQDVAWHLLHESLFGSVADD-QKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPY---SEYILATGSA---- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~~l~sgs~---- 170 (437)
....|+|.| ++.++++ ... +.|++++..++. ...+..+.. ..+....|+|+|+ +..+.++-+.
T Consensus 28 ~P~~~a~~p-dG~l~V~-e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 28 KPHALLWGP-DNQIWLT-ERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SEEEEEECT-TSCEEEE-ETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CceEEEEcC-CCcEEEE-EcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 346899999 5666655 455 468888764321 112222211 2456789999996 5554454432
Q ss_pred --------CCeEEEEeCCCCc------eeee-Eecc-CCCceEEEEEcCCCCcEEEEEe
Q psy4571 171 --------DKTVALWDLRNLK------LKLH-SFES-HKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 171 --------dg~i~lwd~~~~~------~~~~-~~~~-h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
...|.-++..... ..+. .+.. .......++|.|+|. ++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 2345555543211 1111 1211 123468999999997 555544
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.97 Score=41.31 Aligned_cols=148 Identities=12% Similarity=0.127 Sum_probs=81.3
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEe----ccCCCceEEEEEcCC---CCcEEEEEeC-------
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSF----ESHKDEIFQVQWSPH---NETILASSGT------- 214 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~----~~h~~~v~~v~~~p~---~~~~l~sg~~------- 214 (437)
....++|.|+|++ |+.+...|.|++++... ... +..+ .........++++|+ +.++.++-..
T Consensus 19 ~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHG-MLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCC-EEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCE-EEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 5689999999985 55666789999998543 210 1111 112346789999996 5555555433
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEE-e-----cCccccEEEEEEccCCCeEEEEEeC-------------CCeE
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-H-----GGHTAKISDFSWNPNEPWVICSVSE-------------DNIM 275 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~-----~~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i 275 (437)
...|..+++........ ..+.+.. + ..|. ...|+|.|+|. +.++.+. .|.|
T Consensus 97 ~~~v~r~~~~~~~~~~~-------~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVT-------DFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEEEEEEECTTSSBEE-------EEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eeEEEEEEECCCCCCCC-------ceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEE
Confidence 23566666654311100 0011111 1 1232 35799999996 6655443 2467
Q ss_pred EEEeCCCCC------------CceeeeeeecccCCceeeeecC-CCCcccc
Q psy4571 276 QEYCDSTDS------------DTKTMRLDSIRSNGGISSTASP-TASSTAS 313 (437)
Q Consensus 276 ~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s 313 (437)
.-.+....- ....+. ........++|.| +|.++++
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a---~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWS---YGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEE---ECCSEEEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEE---EcCcCccceEEECCCCCEEEE
Confidence 777765321 111111 1233456678888 6666554
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.37 E-value=0.89 Score=40.34 Aligned_cols=194 Identities=7% Similarity=-0.001 Sum_probs=90.1
Q ss_pred CCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC------CeEEEEeCCCCce
Q psy4571 115 HESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD------KTVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d------g~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||..+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDS-WYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTE-EEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCe-EEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 45677777654 568888887431 1222222111111222222 344 67777765 4588999987553
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGT---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
... .+......-..+.+ ++. +++.|+. -..+.+||+.+..-.... ..+. ....| .
T Consensus 131 ~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p~----~r~~~----~ 195 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEA--NGL-IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC----PMIE----ARKNH----G 195 (306)
T ss_dssp EEECCCSSCCBSCEEEEE--TTE-EEEECCEESCTTTCEECCCEEEEETTTTEEEEEC----CCSS----CCBSC----E
T ss_pred EeCCCCcCCcceeEEEEE--CCE-EEEECCCCCCCCcccccceEEEeCCCCCeEEECC----Cccc----hhhcc----e
Confidence 111 11111111122222 443 6777653 244888998775321110 0000 01122 1
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-... ....... +..-++++++.|+.++.. ...
T Consensus 196 ~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~-~~~~~~~i~v~GG~~~~~------~~~ 263 (306)
T 3ii7_A 196 LVFV--KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP--WKGVTVK-CAAVGSIVYVLAGFQGVG------RLG 263 (306)
T ss_dssp EEEE--TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCS--CCBSCCE-EEEETTEEEEEECBCSSS------BCC
T ss_pred EEEE--CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC--CCcccee-EEEECCEEEEEeCcCCCe------eee
Confidence 2222 444 77777643 46889998876322111111 1111111 222367777777755331 112
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 264 ~~~~yd~~~~ 273 (306)
T 3ii7_A 264 HILEYNTETD 273 (306)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEcCCCC
Confidence 2566676554
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.42 Score=42.42 Aligned_cols=194 Identities=7% Similarity=0.038 Sum_probs=90.1
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCce
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.++ .+.+||+.+.+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSVANMRDRRSTLGAAVL--NGL-LYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTE-EEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc-eeeCCCCCccccceEEEEE--CCE-EEEEcCCCCCccCceEEEEeCCCCeE
Confidence 45677777654 357888887431 1122111111111222222 344 677777653 577889887553
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeCC-------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
... .+.........+.+ ++. +++.|+.+ ..+.+||+.+..-.... ..+ .....| ..+
T Consensus 137 ~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p----~~r~~~----~~~ 201 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTNEWTYIA----EMS----TRRSGA----GVG 201 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTTEEEEEC----CCS----SCCBSC----EEE
T ss_pred eecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCCcEEECC----CCc----cccccc----cEE
Confidence 111 11111111122222 343 67777643 34888998765321110 000 001122 222
Q ss_pred EEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+ ++. +++.|+.+ ..+.+||+.+.+-...-... .......+...++++++.|+.++.. ....+
T Consensus 202 ~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~~~~i~v~GG~~~~~------~~~~v 269 (302)
T 2xn4_A 202 VL--NNL-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN---MCRRNAGVCAVNGLLYVVGGDDGSC------NLASV 269 (302)
T ss_dssp EE--TTE-EEEECCBSSSSBCCCEEEEETTTTEEEEECCCS---SCCBSCEEEEETTEEEEECCBCSSS------BCCCE
T ss_pred EE--CCE-EEEECCCCCCcccceEEEEeCCCCCEeeCCCCC---CccccCeEEEECCEEEEECCcCCCc------ccccE
Confidence 22 454 77777754 46889999876332211111 1111112333467777777755431 11225
Q ss_pred ccccchhh
Q psy4571 332 VLFDILVC 339 (437)
Q Consensus 332 ~~wd~~~~ 339 (437)
.++|..+.
T Consensus 270 ~~yd~~~~ 277 (302)
T 2xn4_A 270 EYYNPTTD 277 (302)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCC
Confidence 66666554
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=94.00 E-value=1.2 Score=39.64 Aligned_cols=194 Identities=11% Similarity=0.087 Sum_probs=89.9
Q ss_pred CCCEEEEEEC----C-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCC
Q psy4571 115 HESLFGSVAD----D-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLR 180 (437)
Q Consensus 115 ~~~~l~~~~~----d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~ 180 (437)
++.+++.|+. + ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ-WSPCAPMSVPRNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTE-EEECCCCSSCCBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCe-EeECCCCCcCccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCC
Confidence 4556666654 2 467888887431 1111111111111222222 344 67776643 358889988
Q ss_pred CCceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 181 NLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 181 ~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+.+.... .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ..+. ....| .
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~----~~p~----~r~~~----~ 210 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRMIT----AMNT----IRSGA----G 210 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEECC----CCSS----CCBSC----E
T ss_pred CCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEeeCC----CCCC----ccccc----e
Confidence 7543111 11111111122222 34 467777654 35888988765321110 0000 01122 2
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-... ....... +..-++++++.|+.++.. ...
T Consensus 211 ~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~-~~~~~~~i~v~GG~~~~~------~~~ 278 (308)
T 1zgk_A 211 VCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMK--HRRSALG-ITVHQGRIYVLGGYDGHT------FLD 278 (308)
T ss_dssp EEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCS--SCCBSCE-EEEETTEEEEECCBCSSC------BCC
T ss_pred EEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCC--CCccceE-EEEECCEEEEEcCcCCCc------ccc
Confidence 2222 454 77777764 56899999876322211111 1111112 223367777777755421 122
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 279 ~v~~yd~~~~ 288 (308)
T 1zgk_A 279 SVECYDPDTD 288 (308)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEcCCCC
Confidence 2566776554
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.47 E-value=1.1 Score=39.69 Aligned_cols=194 Identities=13% Similarity=0.047 Sum_probs=89.8
Q ss_pred CCCEEEEEE-CC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCc
Q psy4571 115 HESLFGSVA-DD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLK 183 (437)
Q Consensus 115 ~~~~l~~~~-~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~ 183 (437)
++.+++.|+ .+ ..+.+||+.+.. ...+..+.........+. -++. +++.|+.+ ..+.++|..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~-l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQE-WSFLPSITRKRRYVASVS--LHDR-IYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEE--ETTE-EEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCe-EEeCCCCChhhccccEEE--ECCE-EEEEcCCCCCccCceEEEEECCCCC
Confidence 345666665 22 367888887431 111111111111112222 2344 67777755 458899998765
Q ss_pred ---ee-eeEeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 184 ---LK-LHSFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 184 ---~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.. +..+......-..+.+ ++. +++.|+.+ ..+.+||+.+..-.. +.........-.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~------------~~~~p~~r~~~~ 154 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNIDQWSM------------LGDMQTAREGAG 154 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTEEEE------------EEECSSCCBSCE
T ss_pred CCeeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCCCeEEE------------CCCCCCCcccce
Confidence 31 1111111111122222 444 67777654 358888887643211 111111111111
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........+...++++++.|+.++... ..
T Consensus 155 ~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~------~~ 222 (301)
T 2vpj_A 155 LVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAH------LS 222 (301)
T ss_dssp EEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSB------CC
T ss_pred EEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcEEeCCCC---CcccccceEEEECCEEEEEeCCCCCcc------cc
Confidence 2222 455 77777654 4588999887633221111 111111123334677777776554311 22
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 223 ~v~~yd~~~~ 232 (301)
T 2vpj_A 223 SVEAYNIRTD 232 (301)
T ss_dssp CEEEEETTTT
T ss_pred eEEEEeCCCC
Confidence 2566776654
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=92.74 E-value=0.14 Score=37.76 Aligned_cols=51 Identities=29% Similarity=0.567 Sum_probs=44.1
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
-|.++.++...+...|..+.. . -|.|++...+.++..+++|-.++.+||..
T Consensus 6 ~w~ls~~e~~~~~~~F~~~D~-~------dG~Is~~el~~~l~~~gl~~~el~~i~~~ 56 (106)
T 1eh2_A 6 PWAVKPEDKAKYDAIFDSLSP-V------NGFLSGDKVKPVLLNSKLPVDILGRVWEL 56 (106)
T ss_dssp CCSSCHHHHHHHHHHHTTSCC-S------SSCCBHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCC-C------CCeEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 488888888889999988774 3 38999999999999999999999999963
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=91.63 E-value=0.2 Score=48.19 Aligned_cols=119 Identities=6% Similarity=0.025 Sum_probs=70.1
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
.....+..+|||++++++|-.+.++.|+|++.......-. ...+...+.....-.-.....+|.++|. ...|---|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k--~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK--LADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC--CSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc--ccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecc
Confidence 3446789999999988888889999999998532110000 0000111111111233467789999995 666777999
Q ss_pred eEEEEeCCCC------CC----ceeeeeee--cccCCceeeeecCCCCcccccC
Q psy4571 274 IMQEYCDSTD------SD----TKTMRLDS--IRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 274 ~i~iwd~~~~------~~----~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~s 315 (437)
.|.-|++... +. +..+..+- .|......-.-.|||++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9999998753 22 22222211 1111111125578999988874
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.44 E-value=6.9 Score=34.30 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=52.8
Q ss_pred CCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-------CeEEEEeCCCC
Q psy4571 115 HESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-------KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-------g~i~lwd~~~~ 182 (437)
++.+++.|+.++ .+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNE-WFHVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCe-EeecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCC
Confidence 467777777653 57788887431 1122111111111222222 344 66766542 35889999875
Q ss_pred ceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCC
Q psy4571 183 KLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIG 227 (437)
Q Consensus 183 ~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~ 227 (437)
..... .+.........+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVL--NN-LLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TT-EEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred cEEECCCCccccccccEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCC
Confidence 53211 11111111122222 34 477787764 358899987653
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.35 E-value=2.2 Score=37.70 Aligned_cols=105 Identities=9% Similarity=0.132 Sum_probs=53.2
Q ss_pred CCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----CeEEEEeCCCCceeee-E
Q psy4571 116 ESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KTVALWDLRNLKLKLH-S 188 (437)
Q Consensus 116 ~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~i~lwd~~~~~~~~~-~ 188 (437)
+.+++.|+. ...+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.++|..+.+.... .
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYS-WTDIRCPFEKRRDAACVFW--DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTE-EEECCCCSCCCBSCEEEEE--TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCC-EecCCCCCcccceeEEEEE--CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 456666665 3568889987432 1111111111111222222 344 67777755 6688999987553211 1
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
+......-..+.+ ++. +++.|+.+ ..+.+||+.+..
T Consensus 88 ~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 1111111122222 444 67777765 458889987753
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=91.32 E-value=1.7 Score=38.72 Aligned_cols=128 Identities=8% Similarity=-0.020 Sum_probs=69.3
Q ss_pred EEEeCCCCcEEEEE---eCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 155 LSFNPYSEYILATG---SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 155 l~~~~~~~~~l~sg---s~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
..|++++.++..+- .....|..-+++... ...+..+.. .+++|+++.+..+......|.+-++.....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--- 179 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--- 179 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE---
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE---
Confidence 36788888744444 234456556665422 344443332 456788887666655466788888766431
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
+.+ ..+ ... ..+.|++.++..+-..+ ..|..-++..... ..+.. ... ..++|++..
T Consensus 180 ---------~~l--~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~-----~~~--~~~~~~g~~ 236 (302)
T 3s25_A 180 ---------ALF--YDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE-----ANI--EHYNVYGSL 236 (302)
T ss_dssp ---------EEE--ECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC-----SCE--EEEEEETTE
T ss_pred ---------EEE--eCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC-----CCc--ceEEECCCE
Confidence 111 222 122 23569999665554333 4566666665432 22211 111 347888887
Q ss_pred cccc
Q psy4571 311 TASE 314 (437)
Q Consensus 311 l~s~ 314 (437)
|..+
T Consensus 237 Iy~~ 240 (302)
T 3s25_A 237 IFYQ 240 (302)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=91.27 E-value=8.4 Score=38.73 Aligned_cols=156 Identities=10% Similarity=0.105 Sum_probs=77.6
Q ss_pred CCCEEEEEECC----CcEEEEEcCCCCCCCCee-e-----eccCCCCeEEEEEeC-CCCcEEEEEeCCC------eEEEE
Q psy4571 115 HESLFGSVADD----QKLMIWDTRSHNVSKPSH-T-----VDAHTAEVNCLSFNP-YSEYILATGSADK------TVALW 177 (437)
Q Consensus 115 ~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~-~-----~~~h~~~v~~l~~~~-~~~~~l~sgs~dg------~i~lw 177 (437)
++.+++.|+.+ ..+.+||+.+.. ...+. . ........ +++..+ ++. +++.|+.++ .+.+|
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~-W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~-lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDK-IDMKNIEVSSSEVPVARMCH-TFTTISRNNQ-LLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSC-EEEEECCCCCSCCCCCCBSC-EEEEETTTTE-EEEECCBSSTTCBCCCCEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCe-EEEeccCCCCCCCCccccce-EEEEEccCCE-EEEEcCCCCCCCccccEEEE
Confidence 56777777753 468888887432 12221 1 11111112 233333 455 677777543 47888
Q ss_pred eCCCCceeee-EeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 178 DLRNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 178 d~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
|..+...... .+. ....-.+.+...++. +++.|+.++ .+.+||..+..-..... . + .......+| .
T Consensus 474 d~~t~~W~~~~~~p-~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~--g--~~p~~r~~~----~ 542 (695)
T 2zwa_A 474 DMKTREWSMIKSLS-HTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTP-K--D--EFFQNSLVS----A 542 (695)
T ss_dssp ETTTTEEEECCCCS-BCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCC-S--S--GGGGSCCBS----C
T ss_pred eCCCCcEEECCCCC-CCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccC-C--C--CCCCcccce----e
Confidence 9887543111 111 111112233323555 788887654 68999988753211100 0 0 000001122 2
Q ss_pred EEEEccCCCeEEEEEeC--C-----CeEEEEeCCCCC
Q psy4571 255 DFSWNPNEPWVICSVSE--D-----NIMQEYCDSTDS 284 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~--d-----g~i~iwd~~~~~ 284 (437)
++.+..+...+++.|+. + +.+.+||+.+..
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 34455552337777765 2 468899998876
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=91.17 E-value=3.7 Score=36.42 Aligned_cols=129 Identities=10% Similarity=0.078 Sum_probs=71.8
Q ss_pred EEEeCCCCcEEEEEeCC-------------CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEE---eCCCeE
Q psy4571 155 LSFNPYSEYILATGSAD-------------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS---GTDRRL 218 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d-------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg---~~dg~i 218 (437)
--+++++.++..+...+ ..|+..+++..+. ..+.. .. ...|+|+++++..+- ..+..|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEeec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 44588899866666654 4677778776442 23322 22 236778888755554 234456
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
..-++..... ..+..+.. .+++|+++++..+......|..-++..+... .+ .. +
T Consensus 132 y~~~~dGs~~---------------~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l-~~-----~ 185 (302)
T 3s25_A 132 YRIRIDGEEK---------------KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LF-YD-----C 185 (302)
T ss_dssp EEEETTSCCC---------------EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EE-EC-----S
T ss_pred EEEECCCCCe---------------EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EE-eC-----C
Confidence 5556654321 11222222 4567888866666555778888888765432 22 11 1
Q ss_pred ceeeeecCCCCcccccC
Q psy4571 299 GISSTASPTASSTASES 315 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s 315 (437)
.....++|++.+|+-..
T Consensus 186 ~~~~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 186 NCYKPVVLDDTNVYYMD 202 (302)
T ss_dssp CEEEEEEEETTEEEEEE
T ss_pred CccceeeecCCEEEEEE
Confidence 11223568888776543
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=90.87 E-value=8.2 Score=34.16 Aligned_cols=133 Identities=11% Similarity=0.013 Sum_probs=61.9
Q ss_pred cEEEEEeCC-------CeEEEEeCCCCceeeeEeccCCCce--EEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 163 YILATGSAD-------KTVALWDLRNLKLKLHSFESHKDEI--FQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 163 ~~l~sgs~d-------g~i~lwd~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
.+++.|+.+ ..+.++|..+.+.. .+.....+. .+++. .++. +++.|+.+ ..+.+||+.+..
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~--~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAKWS--EVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTEEE--EECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCCEe--ECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 367777754 34788898875532 121111111 11222 3444 67777642 348899987753
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
-.... ..+ .....| ..+.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........
T Consensus 187 W~~~~----~~p----~~r~~~----~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~ 248 (318)
T 2woz_A 187 WKDLA----PMK----TPRSMF----GVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF---PQERSSIS 248 (318)
T ss_dssp EEEEC----CCS----SCCBSC----EEEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCCEEECCCC---SSCCBSCE
T ss_pred EEECC----CCC----CCcccc----eEEEE--CCE-EEEEcCcCCCCccceEEEEECCCCeEEECCCC---CCcccceE
Confidence 21110 000 001122 12222 455 67677643 3577899887643221111 11111112
Q ss_pred eecCCCCcccccCCC
Q psy4571 303 TASPTASSTASESPT 317 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d 317 (437)
+...++++++.|+.+
T Consensus 249 ~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 249 LVSLAGSLYAIGGFA 263 (318)
T ss_dssp EEEETTEEEEECCBC
T ss_pred EEEECCEEEEECCee
Confidence 333466777777654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.75 E-value=8.3 Score=34.06 Aligned_cols=104 Identities=11% Similarity=0.101 Sum_probs=51.7
Q ss_pred cEEEEEeCC--------CeEEEEeCCCCceeee-EeccCCCceEEEEEcCCCCcEEEEEeC-C-----CeEEEEEcCCCC
Q psy4571 163 YILATGSAD--------KTVALWDLRNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGT-D-----RRLHVWDLSKIG 227 (437)
Q Consensus 163 ~~l~sgs~d--------g~i~lwd~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~-d-----g~i~vwd~~~~~ 227 (437)
.+++.|+.+ ..+.++|..+.+.... .+......-..+. -++. +++.|+. + ..+.+||+.+..
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDL-VYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTE-EEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCE-EEEEeCCCCCCcccceEEEEeCCCCe
Confidence 367777742 4588999987543111 1111111112222 2343 6777775 2 358889987653
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC-----eEEEEeCCCCC
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN-----IMQEYCDSTDS 284 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~ 284 (437)
-.... ..+. ....|. ++.+ ++. +++.|+.++ .+.+||+.+.+
T Consensus 177 W~~~~----~~p~----~r~~~~----~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 177 WKELA----PMQT----ARSLFG----ATVH--DGR-IIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEECC----CCSS----CCBSCE----EEEE--TTE-EEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEECC----CCCC----chhceE----EEEE--CCE-EEEEeccCCCCccceEEEEECCCCe
Confidence 21110 0000 011221 2222 455 777777654 58889988763
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.46 E-value=1.6 Score=39.53 Aligned_cols=111 Identities=5% Similarity=-0.030 Sum_probs=61.4
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEE--eCCCCcEEEEE-eCCCeEEEEeCCCCceeeeEecc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSF--NPYSEYILATG-SADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~--~~~~~~~l~sg-s~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
+.+++.++.||.|.-.|.++ ++..-.+... ..++....- .+.+..+++.. +.||.|..++..++.. ...+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t---G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN---GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT---TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCC---CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeecc
Confidence 34777889999999888873 4444444322 112221110 01122334333 6899999999887643 222211
Q ss_pred ----CCCceEE---EEE-c----CCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 192 ----HKDEIFQ---VQW-S----PHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 192 ----h~~~v~~---v~~-~----p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
...++.. ... . ..+. .+++|+.+|++...|+++++...+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp HHHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEE
T ss_pred ccceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEE
Confidence 1122221 000 0 0233 578999999999999999876544
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.74 E-value=4.5 Score=35.83 Aligned_cols=189 Identities=12% Similarity=0.095 Sum_probs=85.9
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-----C------CeEEEEeCCCCceee
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-----D------KTVALWDLRNLKLKL 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-----d------g~i~lwd~~~~~~~~ 186 (437)
+++.|+ ..+.+||+.+.. .. ...+..............++. +++.|+. . ..+..||..+.+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~-W~-~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-- 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE-CY-CASLSSQVPKNHVSLVTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-- 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTE-EE-EEECCCCSCSSEEEEECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--
T ss_pred EEEEcC--CceEEECCCCCe-Ee-cCCCCCCCCccceEEEEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE--
Confidence 444555 568899988542 11 122221112222233334455 6777773 1 1277888887543
Q ss_pred eEeccCCCce--EEEEEcCCCCcEEEEEeCC--------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 187 HSFESHKDEI--FQVQWSPHNETILASSGTD--------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 187 ~~~~~h~~~v--~~v~~~p~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
..+.....+- .+++.. ++ .+++.|+.+ ..+.+||+.+..-.... ..+. ...+|. .+
T Consensus 80 ~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~----~~p~----~r~~~~----~~ 145 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD----PLPY----VVYGHT----VL 145 (315)
T ss_dssp EECCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC----CCSS----CCBSCE----EE
T ss_pred EECCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC----CCCC----ccccee----EE
Confidence 1221111111 112222 34 467777742 34888998765321110 0000 011221 12
Q ss_pred EEccCCCeEEEEEeC------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 257 SWNPNEPWVICSVSE------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
. .++. +++.|+. -..+.+||+.+.+-...-.. ........+..-++++++.|+.++.. ....
T Consensus 146 ~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~------~~~~ 213 (315)
T 4asc_A 146 S--HMDL-VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM---QTARSLFGATVHDGRIIVAAGVTDTG------LTSS 213 (315)
T ss_dssp E--ETTE-EEEECCBCTTSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEEEEECSSS------EEEE
T ss_pred E--ECCE-EEEEeCCCCCCcccceEEEEeCCCCeEEECCCC---CCchhceEEEEECCEEEEEeccCCCC------ccce
Confidence 2 2455 7777765 24688999887632211111 11111112233366777776654321 1122
Q ss_pred cccccchhh
Q psy4571 331 LVLFDILVC 339 (437)
Q Consensus 331 i~~wd~~~~ 339 (437)
+.++|..+.
T Consensus 214 ~~~yd~~~~ 222 (315)
T 4asc_A 214 AEVYSITDN 222 (315)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 556666554
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=87.48 E-value=0.59 Score=33.10 Aligned_cols=51 Identities=47% Similarity=0.905 Sum_probs=43.2
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|.++.++...+...|..+..+.+ |.|+....+.++...+++-.++.++|..
T Consensus 1 w~ls~~~~~~~~~~F~~~D~d~d------G~I~~~el~~~l~~~g~~~~~~~~i~~~ 51 (92)
T 1fi6_A 1 WKITDEQRQYYVNQFKTIQPDLN------GFIPGSAAKEFFTKSKLPILELSHIWEL 51 (92)
T ss_dssp CCCCHHHHHHHHHHHTTTCCSTT------CEEEHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCC------CcCcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77888888888899988775433 8999999999999999999999999964
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=86.99 E-value=14 Score=32.52 Aligned_cols=106 Identities=10% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCce
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+..+|+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDE-WHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCe-EeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 45677776643 357888887431 1111111111111222222 344 67777654 4588999887543
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCC
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIG 227 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~ 227 (437)
... .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 197 ~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eeCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCc
Confidence 111 11111111122223 34 477777764 458899987753
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=86.39 E-value=2.4 Score=38.39 Aligned_cols=61 Identities=10% Similarity=-0.106 Sum_probs=28.0
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.+.+||+.+.+-...-... .......+...++++++.|+.+..-.. ...+.+.++.+++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~~~~i~v~GG~~~~~~~-----~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELS---QGRAYGVSLPWNNSLLIIGGETAGGKA-----VTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECS---SCCBSSEEEEETTEEEEEEEECGGGCE-----EEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCC---CCcccceeEEeCCEEEEEeeeCCCCCE-----eeeEEEEEEcCcEeE
Confidence 5778999876543322111 111112234457787777775543211 122555566665543
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=86.35 E-value=0.63 Score=33.21 Aligned_cols=51 Identities=25% Similarity=0.534 Sum_probs=42.6
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|.++.++...+...|..+..+.+ |.|+....+.++...+++-.++.++|..
T Consensus 2 w~ls~~~~~~~~~~F~~~D~d~d------G~I~~~el~~~l~~~g~~~~~~~~i~~~ 52 (95)
T 1c07_A 2 WVVSPAEKAKYDEIFLKTDKDMD------GFVSGLEVREIFLKTGLPSTLLAHIWSL 52 (95)
T ss_dssp CSSCSHHHHHHHHHHHHHCTTCS------SEECHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhCCCCC------CcEeHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 66777777778888988775433 8999999999999999999999999964
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=85.92 E-value=20 Score=32.44 Aligned_cols=251 Identities=10% Similarity=0.010 Sum_probs=120.8
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC-
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL- 114 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~- 114 (437)
....++|. |++.++++-...+.|++++..++....+.-.+. +.+ .-......|+++|+
T Consensus 33 ~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~---v~~-----------------~g~~GllGia~~Pdf 91 (347)
T 3das_A 33 SPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPG---VSP-----------------SGEGGLLGIALSPDY 91 (347)
T ss_dssp SEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTT---CCC-----------------BTTBSEEEEEECTTH
T ss_pred CceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCc---eee-----------------cCCCCceeeEecccc
Confidence 34567788 888777666557777777654443322111110 000 01134568999984
Q ss_pred --CCCEEEEEE--CCCcEEEEEcCCCC-----CCCC--e-eeec---cCCCCeEEEEEeCCCCcEEEEEeC---------
Q psy4571 115 --HESLFGSVA--DDQKLMIWDTRSHN-----VSKP--S-HTVD---AHTAEVNCLSFNPYSEYILATGSA--------- 170 (437)
Q Consensus 115 --~~~~l~~~~--~dg~v~vwd~~~~~-----~~~~--~-~~~~---~h~~~v~~l~~~~~~~~~l~sgs~--------- 170 (437)
++.++++-+ .++.|.-|.+.... .... + ..+. .|. -..|+|.|+|. +.++.+.
T Consensus 92 ~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd 168 (347)
T 3das_A 92 ASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKM-LYAGTGESGDTGLSQD 168 (347)
T ss_dssp HHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSC-EEEECBCTTCGGGTTC
T ss_pred ccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCC-EEEEECCCCCCccccC
Confidence 344444322 34556666665311 1111 1 1121 232 45799999997 5665432
Q ss_pred ----CCeEEEEeCCCC--------ceeeeEeccCCCceEEEEEcCCCCcEEEEE-eCCCeEEEEEcCCCCCC---C-CCC
Q psy4571 171 ----DKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSPHNETILASS-GTDRRLHVWDLSKIGEE---Q-STE 233 (437)
Q Consensus 171 ----dg~i~lwd~~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg-~~dg~i~vwd~~~~~~~---~-~~~ 233 (437)
.|.|.-.+.+.. ...+ .-.+|.+ ...++|+|+|. ++++- +.|+.=.|--+..+... . .-.
T Consensus 169 ~~~~~G~IlRi~~dG~ip~~nPf~~~~i-~a~G~RN-p~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~ 245 (347)
T 3das_A 169 RKSLGGKILRMTPDGEPAPGNPFPGSPV-YSYGHRN-VQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGK 245 (347)
T ss_dssp TTCSTTCEEEECTTSSBCTTCSSTTCCE-EEBCCSB-CCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSS
T ss_pred CCCCCCEEEEEeCCCCccCCCCCCCCeE-EeeCCCC-cceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCC
Confidence 344544455431 1111 1224543 46899999876 44433 23332333333333221 0 000
Q ss_pred CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCccc
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
.....-..++..+..+......++|.. |. +++..-..+.|....+........ -..-.........++..|||.+++
T Consensus 246 ~~~~~~~~P~~~~~~~~~ap~G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv 323 (347)
T 3das_A 246 GGGSGFHDPVAQWSTDEASPSGIAYAE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWL 323 (347)
T ss_dssp CCCTTCCCCSEEECTTTCCEEEEEEET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEE
T ss_pred CCCccccCCcEecCCCCCCCcceEEEc-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEE
Confidence 000111123334443334667788863 44 666665666676666665432111 111111123456678899998766
Q ss_pred ccC
Q psy4571 313 SES 315 (437)
Q Consensus 313 s~s 315 (437)
+.+
T Consensus 324 ~td 326 (347)
T 3das_A 324 VTS 326 (347)
T ss_dssp EEC
T ss_pred EEc
Confidence 644
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=85.68 E-value=6.9 Score=34.67 Aligned_cols=145 Identities=11% Similarity=0.067 Sum_probs=66.0
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC----CC-------eEEEEeCCCCcee
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA----DK-------TVALWDLRNLKLK 185 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~----dg-------~i~lwd~~~~~~~ 185 (437)
.+++.|+. .+..||+.+.. ... ..+..............++. +++.|+. ++ .+..+|..+.+..
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~-W~~-~~~~~~~~r~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENE-CYL-TALAEQIPRNHSSIVTQQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEECSS--EEEEEETTTTE-EEE-EEECTTSCSSEEEEECSSSC-EEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhhcccc--ceEEECCCCCc-eec-ccCCccCCccceEEEEECCE-EEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 34444443 37888887432 111 11211111222222334444 6777773 12 2778888875431
Q ss_pred ee-EeccCCCceEEEEEcCCCCcEEEEEeCC-------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 186 LH-SFESHKDEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 186 ~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.. .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ..+.. ..+|. .+.
T Consensus 92 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p~~----r~~~~----~~~ 156 (318)
T 2woz_A 92 GLPPLPSARCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK----NLPIK----VYGHN----VIS 156 (318)
T ss_dssp ECSCBSSCBCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC----CCSSC----EESCE----EEE
T ss_pred ECCCCCccccccceEEE--CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECC----CCCCc----ccccE----EEE
Confidence 11 11111111122222 34 467777754 24788888764321110 00000 12332 112
Q ss_pred EccCCCeEEEEEeC------CCeEEEEeCCCCC
Q psy4571 258 WNPNEPWVICSVSE------DNIMQEYCDSTDS 284 (437)
Q Consensus 258 ~~p~~~~~l~s~~~------dg~i~iwd~~~~~ 284 (437)
.++. +++.|+. -..+.+||+.+.+
T Consensus 157 --~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 157 --HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp --ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred --ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 3555 6667664 2458899998764
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=85.60 E-value=0.65 Score=35.91 Aligned_cols=51 Identities=33% Similarity=0.477 Sum_probs=42.0
Q ss_pred cccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 367 SIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 367 ~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
.-|.+. ++...+...|..+. ..+ |.|++...+.++..+++|-.++.+||..
T Consensus 42 ~~W~~~-~e~~~l~~~F~~fD-d~d------G~Is~~El~~~l~~~gl~~~el~~I~~~ 92 (139)
T 2jq6_A 42 VEWVVG-KDKPTYDEIFYTLS-PVN------GKITGANAKKEMVKSKLPNTVLGKIWKL 92 (139)
T ss_dssp CCCGGG-GTHHHHHHHHHHSC-CSS------SEEEHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCCCh-HHHHHHHHHHHHhC-CCC------CeECHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 358775 55666888888877 433 8999999999999999999999999964
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=84.75 E-value=17 Score=34.36 Aligned_cols=115 Identities=9% Similarity=0.077 Sum_probs=62.3
Q ss_pred CeEEEEEeCCCC-cEEEEEeCCCeEEEEeCCCCc--eeeeEec---------cCCCceEEEEEcCC---CCcEEEEEeC-
Q psy4571 151 EVNCLSFNPYSE-YILATGSADKTVALWDLRNLK--LKLHSFE---------SHKDEIFQVQWSPH---NETILASSGT- 214 (437)
Q Consensus 151 ~v~~l~~~~~~~-~~l~sgs~dg~i~lwd~~~~~--~~~~~~~---------~h~~~v~~v~~~p~---~~~~l~sg~~- 214 (437)
....|+|.|+|. + |+.+...|.|++++..... .++..+. ........|+|+|+ +.++.++-+.
T Consensus 15 ~P~~~a~~pdG~~r-l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQR-LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCC-EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeE-EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 467899999985 4 5666789999999754321 1122221 11456889999996 2334544332
Q ss_pred -C----------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEEEEccCCCeEEEEEeC
Q psy4571 215 -D----------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 215 -d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
+ ..|.-|.+........ .....+.+.... ........|+|.|||. |.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~----d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQV----DLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSB----CGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCcc----CCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 1344466653211000 000112222221 1122468899999998 5555544
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=83.31 E-value=4.4 Score=39.13 Aligned_cols=74 Identities=9% Similarity=0.152 Sum_probs=54.4
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc-----------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLK-----------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~-----------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
....+..+|||++++++|-.+.++.++|.+... ..+..-..-.-.....+|.++|. ...|--.|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecceEE
Confidence 345688999999988888889999999988421 11111111234567899999994 577777899999
Q ss_pred EEEcCC
Q psy4571 220 VWDLSK 225 (437)
Q Consensus 220 vwd~~~ 225 (437)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999965
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=82.98 E-value=29 Score=32.75 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=58.2
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---------cCCCCeEEEEEeCC---CCcEEEEEeC--
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---------AHTAEVNCLSFNPY---SEYILATGSA-- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~---~~~~l~sgs~-- 170 (437)
....|+|.|++...|+++...|.|++++.........+..+. ...+....|+|+|+ +.++.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999543234456789999999754221112222211 12457899999996 3333444332
Q ss_pred C----------CeEEEEeCCCC---------ceeeeEec--cCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 171 D----------KTVALWDLRNL---------KLKLHSFE--SHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 171 d----------g~i~lwd~~~~---------~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
+ ..|.-|.+... ...+..+. ........|+|.|||. |+++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 13444555321 11122221 1123457899999997 5655543
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=82.55 E-value=27 Score=31.28 Aligned_cols=30 Identities=10% Similarity=-0.145 Sum_probs=17.4
Q ss_pred CCCeEEEEEeCCC------eEEEEeCCCCCCceeeee
Q psy4571 261 NEPWVICSVSEDN------IMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 261 ~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~ 291 (437)
++. +++.|+.++ .+.++++++++.......
T Consensus 316 ~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 316 NNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp TTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred CCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 555 777777542 456668888776655443
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=81.97 E-value=0.5 Score=34.92 Aligned_cols=61 Identities=44% Similarity=0.774 Sum_probs=47.7
Q ss_pred CCCccccccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 359 DNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 359 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|+.......-|.++.++...+...|..+....+ |.|++...+.++...+++-.++.++|..
T Consensus 4 ~~~~~~~~~~~~ls~~~~~~~~~~F~~~D~d~d------G~Is~~el~~~l~~~gl~~~el~~i~~~ 64 (110)
T 1iq3_A 4 QDNSSYPDEPWRITEEQREYYVNQFRSLQPDPS------SFISGSVAKNFFTKSKLSIPELSYIWEL 64 (110)
T ss_dssp CCCCCCCCSSCCCSSSSHHHHHHHHHHHCCSSS------SEEEHHHHHHHCCSSSCSSCCHHHHHHH
T ss_pred CcCCCCCCCCCcCCHHHHHHHHHHHHHHCCCCC------CeEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 334434455788877777888888988775433 8999999999999999999999999964
|
| >3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A* | Back alignment and structure |
|---|
Probab=80.25 E-value=35 Score=31.19 Aligned_cols=153 Identities=12% Similarity=0.035 Sum_probs=76.4
Q ss_pred eEEEEeCCCC--ceeeeEecc------CCCceEEEEEc---CC----CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 173 TVALWDLRNL--KLKLHSFES------HKDEIFQVQWS---PH----NETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 173 ~i~lwd~~~~--~~~~~~~~~------h~~~v~~v~~~---p~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.|.+||+.+. +. ++.+.- .......+++. |. +.+..++=+...-|.|+|+.+++..+..... -
T Consensus 124 kLv~~DL~t~~~~l-i~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPE-VVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-F 201 (381)
T ss_dssp EEEEEESSSTTCCE-EEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-G
T ss_pred eEEEEECCCCCcee-EEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-C
Confidence 4666777775 43 333321 12457788877 32 3344455556778999999987654432111 0
Q ss_pred CC-CceEEEecCcc----ccEEEEEEccC----CCeEEEEEeCCCeEEEEe---CCCCCCceeeeeeecc--cCCceeee
Q psy4571 238 GP-PELLFIHGGHT----AKISDFSWNPN----EPWVICSVSEDNIMQEYC---DSTDSDTKTMRLDSIR--SNGGISST 303 (437)
Q Consensus 238 ~~-~~~~~~~~~h~----~~v~~l~~~p~----~~~~l~s~~~dg~i~iwd---~~~~~~~~~~~~~~~~--~~~~~~~~ 303 (437)
.+ ....+...|.. ..+..|+.+|+ ++.+....-....++--. ++.......+...... .......+
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 11 11222333332 47899999998 664444443333333332 1222222222211111 12223345
Q ss_pred ec-CCCCcccccCCCCcccccccccccccccccchh
Q psy4571 304 AS-PTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 304 ~s-~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+. .+|.+.++--.... |..|+..+
T Consensus 282 ~D~~~G~ly~~~~~~~a-----------I~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQ-----------VSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEESSSSE-----------EEEEETTS
T ss_pred EeCCCCeEEEEeccCCe-----------EEEEeCCC
Confidence 54 56766666655555 77887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 437 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 5e-15 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-11 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-08 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-05 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-15 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-11 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-10 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.001 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 7e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 5e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.002 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-10 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 7e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-06 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 7e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-09 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-04 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-09 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 6e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 1e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 6e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 4e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.003 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 7e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-06 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.001 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 1e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.001 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 4e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.001 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.002 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 5e-05 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 7e-05 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.003 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 73.2 bits (178), Expect = 5e-15
Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+ S + D+ + +WD + T+ H V + F+ ++I +
Sbjct: 209 ETKKSGKPGPFLLSGSRDKTIKMWDVST---GMCLMTLVGHDNWVRGVLFHSGGKFI-LS 264
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ DKT+ +WD +N + + + +H+ + + + + + D+ + VW+
Sbjct: 265 CADDKTLRVWDYKNKRC-MKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.1 bits (149), Expect = 3e-11
Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 39/178 (21%)
Query: 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY----------- 163
+L S ++DQ + +W + + + H V C+S+ P S Y
Sbjct: 154 DGTLIASCSNDQTVRVWVVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSET 210
Query: 164 --------ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
L +GS DKT+ +WD+ L + H + + V + + S D
Sbjct: 211 KKSGKPGPFLLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLFHS-GGKFILSCADD 268
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ L VWD + H ++ ++ P+V+ + S D
Sbjct: 269 KTLRVWDYKN--------------KRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQ 311
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.0 bits (128), Expect = 1e-08
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190
W R + + H + V + F+P + + S D T+ +WD + +
Sbjct: 3 WIPRP----PEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDF-ERTLK 56
Query: 191 SHKDEIFQVQWSPHN 205
H D + + +
Sbjct: 57 GHTDSVQDISFDHSG 71
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 11/185 (5%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
+ + S + D+ + +W+ ++ T H V + N I A+ S
Sbjct: 108 SIMPNGDHIVSASRDKTIKMWEVQTG---YCVKTFTGHREWVRMVRPNQDGTLI-ASCSN 163
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
D+TV +W + + K H+ + + W+P + S T
Sbjct: 164 DQTVRVWVVATKECK-AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222
Query: 231 STEDA-----EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
+ D + L GH + ++ +++ S ++D ++ +
Sbjct: 223 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKNKRC 281
Query: 286 TKTMR 290
KT+
Sbjct: 282 MKTLN 286
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 29/252 (11%), Positives = 71/252 (28%), Gaps = 23/252 (9%)
Query: 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246
++ H+ + +V + P +++ S+ D + VWD +
Sbjct: 11 YALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYET--------------GDFERTL 55
Query: 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST--- 303
GHT + D S++ + + ++ I + D S+ I
Sbjct: 56 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 115
Query: 304 -ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDT 362
S + T T + + + ++ + S+D+
Sbjct: 116 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC---SNDQTVRVWVV 172
Query: 363 EDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKI 422
+ + + + + S+S+ + F S ++ +
Sbjct: 173 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK-M 231
Query: 423 WYPDSNKILSTW 434
W + L T
Sbjct: 232 WDVSTGMCLMTL 243
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 73.2 bits (178), Expect = 7e-15
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 21/164 (12%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
LF S A D +WD R T H +++N + F P ATGS
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVRE---GMCRQTFTGHESDINAICFFPNGNA-FATGSD 246
Query: 171 DKTVAL-WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
D T L + +L +S ++ I V +S + +L + D +VWD K
Sbjct: 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALK---- 301
Query: 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ + GH ++S + V + S D+
Sbjct: 302 ----------ADRAGVLAGHDNRVSCLGVTDDGMAVA-TGSWDS 334
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.0 bits (154), Expect = 7e-12
Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+ + + + F + +DD ++D R+ + + +SF+ L
Sbjct: 231 AICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG-ITSVSFSKSGRL-LLA 287
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
G D +WD H + + + + + +A+ D L +W+
Sbjct: 288 GYDDFNCNVWDALKADR-AGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.8 bits (125), Expect = 3e-08
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 82 SCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141
+C L E++ + V++ L + DD +WD +
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALK---ADR 304
Query: 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
+ + H V+CL +ATGS D + +W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMA-VATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
+ T+ H A++ + + S L + S D + +WD K+H+ +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRL-LVSASQDGKLIIWDSYTTN-KVHAIPLRSSWVMTC 103
Query: 200 QWSPHNETI 208
++P +
Sbjct: 104 AYAPSGNYV 112
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.7 bits (153), Expect = 1e-11
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE---------VNCLSFN 158
V + S + D+ + +W+ ++ N S T ++ T E V ++
Sbjct: 259 SVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317
Query: 159 PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH-----NETILASSG 213
EYI +GS D+ V WD ++ L + H++ + V + + A+
Sbjct: 318 QNDEYI-LSGSKDRGVLFWDKKSGNP-LLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 214 TDRRLHVWDLSKI 226
D + +W KI
Sbjct: 376 GDCKARIWKYKKI 388
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.8 bits (143), Expect = 2e-10
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 36/183 (19%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRS----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ + D+ + +WD+ + + + + H V + F + +
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VV 270
Query: 167 TGSADKTVALWDLRNLKLK-----------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
+GS D++V LW+L+N K ++ HKD + V + N+ + S D
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKD 329
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-----VICSVS 270
R + WD L + GH + + V + S
Sbjct: 330 RGVLFWDKKS--------------GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 271 EDN 273
D
Sbjct: 376 GDC 378
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.6 bits (119), Expect = 2e-07
Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 9/133 (6%)
Query: 154 CLSFNPYSEYILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHNETILA 210
L + S + L++ R + ++LH H + V++S E +
Sbjct: 20 LLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL-- 77
Query: 211 SSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266
++G ++ V+ +S D +D I ++P+ ++
Sbjct: 78 ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137
Query: 267 CSVSEDNIMQEYC 279
+ I
Sbjct: 138 TGAEDRLIRIWDI 150
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.8 bits (117), Expect = 3e-07
Identities = 27/144 (18%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 153 NCLSFNPYSEYILATGSADKTVALWDLRN------LKLKLHSFESHKDEIFQVQWSPHNE 206
++ +P +A GS D+ V +WD L + S HKD ++ V ++ +
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 267
Query: 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266
+ + S DR + +W+L + ++ G E+ +I H + + N+ +++
Sbjct: 268 S-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYIL 324
Query: 267 CSVSEDNIMQEYCDSTDSDTKTMR 290
S S+D + + + + ++
Sbjct: 325 -SGSKDRGVLFWDKKSGNPLLMLQ 347
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.0 bits (89), Expect = 0.001
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 19/87 (21%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL-----------------K 185
H HT+ V C+ F+ EY LATG +KT ++ + + L
Sbjct: 56 HKSLDHTSVVCCVKFSNDGEY-LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN 113
Query: 186 LHSFESHKDEIFQVQWSPHNETILASS 212
S S I V +SP + + +
Sbjct: 114 TSSSPSSDLYIRSVCFSPDGKFLATGA 140
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.6 bits (145), Expect = 1e-10
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILA 210
++C ++N +A + V +++ K ++H + H ++ V W+P + +
Sbjct: 10 ISCHAWNKDRTQ-IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIV 67
Query: 211 SSGTDRRLHVWD 222
+ GTDR +VW
Sbjct: 68 TCGTDRNAYVWT 79
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.4 bits (121), Expect = 1e-07
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+ ++ ++ I++ + H + H +V + + P S + T D+ +
Sbjct: 20 TQIAICPNNHEVHIYEKSGNKW-VQVHELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYV 77
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
W L+ K + + NE A R + +
Sbjct: 78 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.5 bits (98), Expect = 7e-05
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 16/87 (18%)
Query: 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246
HSF + I W+ + T +A + +H+++ +
Sbjct: 3 HSF--LVEPISCHAWNK-DRTQIAICPNNHEVHIYEK------------SGNKWVQVHEL 47
Query: 247 GGHTAKISDFSWNPNEPWVICSVSEDN 273
H +++ W P+ I + D
Sbjct: 48 KEHNGQVTGVDWAPDSNR-IVTCGTDR 73
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.5 bits (90), Expect = 5e-04
Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTV---DAHTAEVNCLSFNPYSEY---ILATGS 169
+S + ++ D ++ + + H V+ +S + T
Sbjct: 289 QSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG 348
Query: 170 ADKTVALWDLRNLKLKL 186
D +++WD+R+L+ L
Sbjct: 349 MDGGMSIWDVRSLESAL 365
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.3 bits (87), Expect = 0.002
Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 9/153 (5%)
Query: 75 NNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134
+ VA +S + + + + +A + ES + D +++
Sbjct: 213 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFT-- 270
Query: 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194
++ + + S + + DK + L S HK+
Sbjct: 271 -YDSAAGKLSFGGRLDVPKQSSQRGLT-ARERFQNLDKKASSEGSAAAGAGLDSL--HKN 326
Query: 195 EIFQVQWSP---HNETILASSGTDRRLHVWDLS 224
+ Q+ + ++G D + +WD+
Sbjct: 327 SVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.7 bits (140), Expect = 3e-10
Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
+ S + D+ + +W+T + + T++ H + CL + ++ +GS+
Sbjct: 143 VVDFDDKYIVSASGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYRDR---LVVSGSS 196
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
D T+ LWD+ + V+ + + S D ++ VWDL + +
Sbjct: 197 DNTIRLWDIECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR 252
Query: 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ L H+ ++ ++ I S S D+
Sbjct: 253 APA-----GTLCLRTLVEHSGRVFRLQFDEF---QIVSSSHDD 287
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (121), Expect = 7e-08
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ +A + L S + D + +WD + + + +
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGAC------LRVLEGHEELVRCIRFDNKRIV 232
Query: 167 TGSADKTVALWDLRNLK--------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 218
+G+ D + +WDL L L + H +F++Q+ + SS D +
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF---QIVSSSHDDTI 289
Query: 219 HVWD 222
+WD
Sbjct: 290 LIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (109), Expect = 2e-06
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 136 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195
H++ + H + V CL ++ + +G D T+ +WD L+ H
Sbjct: 3 HSLQR-IHCRSETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTLEC-KRILTGHTGS 57
Query: 196 IFQVQWSPH 204
+ +Q+
Sbjct: 58 VLCLQYDER 66
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.7 bits (140), Expect = 5e-10
Identities = 21/185 (11%), Positives = 56/185 (30%), Gaps = 15/185 (8%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN----------LKLKLHSFESH 192
+ AH A++ +S + S D + +WD + +H H
Sbjct: 8 NAGKAHDADIFSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 193 KDEIFQ-VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251
++ Q ++ ++A++ L + +++ E + + + A
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 252 KISDFSWNPNEPWVICSVSED-NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310
S + + + ++ ++ L+ + + SP S
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 311 TASES 315
+ S
Sbjct: 185 QFATS 189
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 2e-08
Identities = 22/185 (11%), Positives = 56/185 (30%), Gaps = 28/185 (15%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA---------HTAEVNCLSFNPYSEYILATGSAD 171
S + D L +WD + + P + H + + + + ++AT S
Sbjct: 29 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 88
Query: 172 KTVALWDLRN---------LKLKLHSFESHKDEIFQVQWSPHNET----ILASSGTDRRL 218
+ + + KL L + K + ++W N+ L ++
Sbjct: 89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTT 148
Query: 219 HVWDLSKIGEEQSTEDAEDGP----PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
++W +E ++ P + + + + +I + +
Sbjct: 149 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGT 206
Query: 275 MQEYC 279
+Q
Sbjct: 207 VQISE 211
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 7e-06
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+ + + + + S+ S AH++ V LSFN E + + D + WD++ +
Sbjct: 264 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLRFWDVKTKE 322
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ + H D+I + + S V L K D +
Sbjct: 323 R-ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES 376
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (136), Expect = 1e-09
Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 4/113 (3%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
L G H + + H + V L F ++ +
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW-FVSTGK 285
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
D + W S + S ++ + + D++ V+++
Sbjct: 286 DNLLNAWRTPYGASIFQS--KESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (108), Expect = 4e-06
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ + F S D L W T S ++ V + +YI
Sbjct: 269 LSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYI-V 322
Query: 167 TGSADKTVALWDL 179
TGS DK ++++
Sbjct: 323 TGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (108), Expect = 4e-06
Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL----KLKLHSFESHKDE 195
+ +T++ H V ++ + + + + TG V +WD+ + + + +
Sbjct: 43 RQINTLN-HGEVVCAVTISNPTRH-VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY 99
Query: 196 IFQVQWSPHNETILASS 212
I + P T++
Sbjct: 100 IRSCKLLPDGCTLIVGG 116
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (89), Expect = 7e-04
Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 13/111 (11%)
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
D + R+ + ++++ +H + + V S + +G + VWD+S G
Sbjct: 29 PPDALIGPGIPRHAR-QINTL-NHGEVVCAVTISNPTRHVY--TGGKGCVKVWDISHPGN 84
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279
+ P I P+ +I +
Sbjct: 85 KS---------PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 0.001
Identities = 15/143 (10%), Positives = 40/143 (27%), Gaps = 20/143 (13%)
Query: 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190
T+++ L + P E++ + L + K +
Sbjct: 206 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK---YQLH 262
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
H+ + ++++ S+G D L+ W +
Sbjct: 263 LHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPY---------------GASIFQSKES 306
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ + + ++ + I + S D
Sbjct: 307 SSVLSCDISVDDKY-IVTGSGDK 328
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.4 bits (134), Expect = 2e-09
Identities = 17/146 (11%), Positives = 41/146 (28%), Gaps = 3/146 (2%)
Query: 146 DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSP 203
A ++ + P L S D ++ ++ + L +K + +
Sbjct: 8 QAPKDYISDIKIIPSKSL-LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263
+ + + + DL Q+ + E G I+ E
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 264 WVICSVSEDNIMQEYCDSTDSDTKTM 289
+ + I + +S ++ K
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNK 152
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 6e-06
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 12/94 (12%)
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248
++ KD I ++ P ++++L + D L V+ + L
Sbjct: 7 EQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVD-----------LLQSLR 54
Query: 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
+ + ++ N I + + +
Sbjct: 55 YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (90), Expect = 5e-04
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
+ + VN + F+P L T +D ++ W+L+ K K+ +F +E V
Sbjct: 242 RLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRK-KIKNFAKF-NEDSVV 298
Query: 200 QWSPHNETILASSGTD 215
+ + + + ++ D
Sbjct: 299 KIACSDNILCLATSDD 314
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.001
Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 1/98 (1%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D+ +SL + D L ++ + + + C +F ++ +
Sbjct: 16 DIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 205
G+ + DL + + +
Sbjct: 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGD 112
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 1e-08
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188
R + + S H ++ ++ S+ IL +GS + +++LR+ KL +
Sbjct: 261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 319
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLS 224
D+I+ V + +T++A+ D + L + D S
Sbjct: 320 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILDFS 355
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.5 bits (116), Expect = 3e-07
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 143 HTVDAHTAEV-NCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 201
T+ H V CL F + TG+ DK + ++D N K L H ++ +++
Sbjct: 6 TTLRGHMTSVITCLQFEDN---YVITGADDKMIRVYDSINKKF-LLQLSGHDGGVWALKY 61
Query: 202 SPHNETILASSGTDRRLHVW 221
+ + S+ R+
Sbjct: 62 AHGGILVSGSTDRTVRVWDI 81
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 2e-05
Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 7/168 (4%)
Query: 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174
++ + ADD+ + ++D+ + K + H V L + IL +GS D+TV
Sbjct: 22 EDNYVITGADDKMIRVYDSINK---KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTV 76
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+WD++ + N + + D LHVW L K E +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK--ESSVPDH 134
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
E+ L+F S + ++ D+T
Sbjct: 135 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNT 182
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.0 bits (125), Expect = 2e-08
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188
T + + E ++ATGS D + ++ ++ + +
Sbjct: 194 REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 253
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+HKD + + W + L SSG D + W+
Sbjct: 254 LNAHKDGVNNLLWETPS--TLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.6 bits (116), Expect = 3e-07
Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 11/140 (7%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
+ T+ H + L+ NP L +GS D + W + + H + I +
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSS------MHQDHSNLIVSL 52
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
S E S +++ + G + A + + + + F+ +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 260 PNEPWVICSVSEDNIMQEYC 279
+ + S + +
Sbjct: 113 IIKSVRLNSPGSAVSLSQNY 132
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.6 bits (124), Expect = 3e-08
Identities = 24/166 (14%), Positives = 46/166 (27%), Gaps = 2/166 (1%)
Query: 59 YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESL 118
+ F + +DV +
Sbjct: 161 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 220
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
+V D+K+ +D +S K S+ AT AD T+ +WD
Sbjct: 221 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQK-FATVGADATIRVWD 279
Query: 179 LRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ K ++ + + + QV + S D L+ ++L
Sbjct: 280 VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.4 bits (100), Expect = 3e-05
Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 9/123 (7%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSFESH-KDEIFQVQWSP-H 204
LS++P + I V D + K+ + F H + V++SP
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
L S ++ VW + E S E ISD SW+
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKS------EFQVLAGPISDISWDFEGRR 129
Query: 265 VIC 267
+
Sbjct: 130 LCV 132
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 1e-04
Identities = 15/187 (8%), Positives = 35/187 (18%), Gaps = 9/187 (4%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE-YILAT 167
+++ ++ + D V ++ V + F+P L +
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 82
Query: 168 GSADKTVALWDLRNLKLK-------LHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLH 219
G V +W K F+ I + W + G D
Sbjct: 83 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGV 142
Query: 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279
++ + + +
Sbjct: 143 FISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 202
Query: 280 DSTDSDT 286
Sbjct: 203 KQGSFVR 209
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.5 bits (121), Expect = 6e-08
Identities = 14/139 (10%), Positives = 37/139 (26%), Gaps = 1/139 (0%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
H + LS + + L + A+ + WD+ + H I ++ +
Sbjct: 6 QVRYGHNKAITALSSSADGKT-LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262
+ S ++ S + ++ + P L + ++ +
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 263 PWVICSVSEDNIMQEYCDS 281
C +
Sbjct: 125 YSHGKLTEVPISYNSSCVA 143
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.7 bits (98), Expect = 4e-05
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 2/115 (1%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
+ F D + +I + ++N LATGS
Sbjct: 185 VAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL 244
Query: 171 DKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
D +V +W++ + +H NET + S+G D + W++
Sbjct: 245 DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNVP 298
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.9 bits (83), Expect = 0.003
Identities = 12/83 (14%), Positives = 20/83 (24%), Gaps = 14/83 (16%)
Query: 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245
H I + S + L S+ + ++ WD+S G
Sbjct: 5 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIST-GISNRV------------F 50
Query: 246 HGGHTAKISDFSWNPNEPWVICS 268
H I+ S
Sbjct: 51 PDVHATMITGIKTTSKGDLFTVS 73
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (118), Expect = 2e-07
Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 17/163 (10%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
S + D + +WD + HT+ H + + + IL +G+A
Sbjct: 182 SLQFDGIHVVSGSLDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDN---ILVSGNA 235
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230
D TV +WD++ + +K + + ++ SS D + +WDL +
Sbjct: 236 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD-DGTVKLWDLKTGEFIR 294
Query: 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ E GG + + + V S +
Sbjct: 295 NLVTLES---------GGSGGVVWRIRASNTKL-VCAVGSRNG 327
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (116), Expect = 4e-07
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 8/75 (10%)
Query: 131 WDTRSHNVSKPSHTVDAHTAEVN-CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 189
W K + H V CL F + +GS D T+ +W K L +
Sbjct: 1 WRRGEL---KSPKVLKGHDDHVITCLQFCGN---RIVSGSDDNTLKVWSAVTGKC-LRTL 53
Query: 190 ESHKDEIFQVQWSPH 204
H ++ Q +
Sbjct: 54 VGHTGGVWSSQMRDN 68
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 49.0 bits (116), Expect = 7e-07
Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 14/189 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++ D ++ + D ++ + +D A V+ + Y L D V + DL
Sbjct: 37 TLRDAGQIALIDGSTY---EIKTVLDTGYA-VHISRLSASGRY-LFVIGRDGKVNMIDLW 91
Query: 181 NLKLK----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
+ + + ++ +A + + + D + ++
Sbjct: 92 MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 151
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSI 294
E + A I + P I +V E ++ +Y D + T + +
Sbjct: 152 MTYDEQEYHPEPRVAAILA---SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF 208
Query: 295 RSNGGISST 303
+GG+ +
Sbjct: 209 LHDGGLDGS 217
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 9/164 (5%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ A KL++ DT V K T+ P AT + +++ DL
Sbjct: 6 APARPDKLVVIDTEKMAVDK-VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV 64
Query: 181 NLKL----KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
+ L + E +F SP +T+ R + +
Sbjct: 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV----QPTRVALY 120
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280
D +I+ +W + + + ++M
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAG 164
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 13/132 (9%), Positives = 34/132 (25%), Gaps = 10/132 (7%)
Query: 162 EYILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
+ + + + D + + K+ + +P A+ L
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280
DL GE D + + G + +P+ + S + + +
Sbjct: 61 IDLVT-GETLGRIDLSTPEERVKSLFG--------AALSPDGKTLAIYESPVRLELTHFE 111
Query: 281 STDSDTKTMRLD 292
+ +
Sbjct: 112 VQPTRVALYDAE 123
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.6 bits (88), Expect = 0.001
Identities = 15/124 (12%), Positives = 35/124 (28%), Gaps = 8/124 (6%)
Query: 61 IWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG 120
+ D+ + A + +L + + E+ + + A + FG
Sbjct: 198 MATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG 257
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
L +D + V ++ + + G A +A +D
Sbjct: 258 ---AYNVLESFDLEKN---ASIKRVP-LPHSYYSVNVSTDGST-VWLGGALGDLAAYDAE 309
Query: 181 NLKL 184
L+
Sbjct: 310 TLEK 313
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 48.4 bits (114), Expect = 1e-06
Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 14/189 (7%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++ D ++ + D S K +D A V+ + Y L D + + DL
Sbjct: 37 TLRDAGQIALVDGDSK---KIVKVIDTGYA-VHISRMSASGRY-LLVIGRDARIDMIDLW 91
Query: 181 NLKLK----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
+ + + + +A + + + D + +Q
Sbjct: 92 AKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 151
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
+ A I + P I +V E + + + +
Sbjct: 152 MTVDTQTYHPEPRVAAI---IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF 208
Query: 297 --NGGISST 303
+GG S+
Sbjct: 209 LADGGWDSS 217
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 47.9 bits (112), Expect = 1e-06
Identities = 13/138 (9%), Positives = 43/138 (31%), Gaps = 13/138 (9%)
Query: 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-----TVDAHTAEVNCL 155
PF + + + ++ + + D + + + +
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 156 SFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213
S + E + +D++ K+ K+ + ++ S + +
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-----TEVKNNLTDLRLSA-DRKTVMVRK 333
Query: 214 TDRRLHVWDLSKIGEEQS 231
D +++ + L K +E++
Sbjct: 334 DDGKIYTFPLEKPEDERT 351
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 47.2 bits (110), Expect = 2e-06
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188
D V + + + +A+ SADKT+ +W++ LK+ +
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKT 275
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
Q + L S + ++ +
Sbjct: 276 IPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.3 bits (87), Expect = 0.001
Identities = 15/130 (11%), Positives = 31/130 (23%), Gaps = 4/130 (3%)
Query: 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209
L P + I +V + +L + H + + SP +
Sbjct: 18 GTAVVLGNTPAGDKIQYC--NGTSVYTVPVGSLTD-TEIYTEHSHQTTVAKTSP-SGYYC 73
Query: 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269
AS + +WD ++ T P + +I+ +
Sbjct: 74 ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 133
Query: 270 SEDNIMQEYC 279
Sbjct: 134 DTGTSNGNLT 143
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 46.7 bits (109), Expect = 3e-06
Identities = 14/147 (9%), Positives = 38/147 (25%), Gaps = 9/147 (6%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214
+ EY + + + + D+ + + K +P N T +
Sbjct: 2 PALKAGHEY-MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
++ DL + G + F+ +P+ V +V+
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSV--------PGEVGRSMYSFAISPDGKEVYATVNPTQR 112
Query: 275 MQEYCDSTDSDTKTMRLDSIRSNGGIS 301
+ ++ + +
Sbjct: 113 LNDHYVVKPPRLEVFSTADGLEAKPVR 139
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 42.0 bits (97), Expect = 9e-05
Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 7/112 (6%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
L + D S V K S + P + + + DL
Sbjct: 13 VTNYPNNLHVVDVASDTVYK-SCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 70
Query: 181 NLKLKLH-----SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
K H ++ SP + + A+ +RL+ + K
Sbjct: 71 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 42.9 bits (99), Expect = 4e-05
Identities = 7/65 (10%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 161 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
S + S +++ D+ + K+ + SP + ++ + +
Sbjct: 1 STFAYIANSESDNISVIDVTSNKV-TATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSI 58
Query: 221 WDLSK 225
D +
Sbjct: 59 IDTAT 63
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 38.3 bits (87), Expect = 0.001
Identities = 6/56 (10%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
+K + + + ++ P + + S TV++ D +
Sbjct: 224 NTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 37.9 bits (86), Expect = 0.002
Identities = 8/83 (9%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Query: 123 ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182
++ + + D S+ V+ T+ + +P + + V++ D
Sbjct: 9 SESDNISVIDVTSNKVTA---TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 183 KLKLHSFESHKDEIFQVQWSPHN 205
+ + V
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQ 87
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 42.5 bits (98), Expect = 5e-05
Identities = 9/122 (7%), Positives = 32/122 (26%), Gaps = 4/122 (3%)
Query: 162 EYILATGSADKTVALWDL-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
+ + + + +W+L L L ++ + SP + + R+
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 221 WDLSK---IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277
+ ++ + + H G + ++ + ++
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 123
Query: 278 YC 279
Sbjct: 124 VE 125
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 7e-05
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
W++ E + Y F +L P +SG + NSKLPV L ++W
Sbjct: 2 WAVKPEDKAKYDAIFDSL-------SPVNGFLSGDKVKPVLLNSKLPVDILGRVW 49
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 41.3 bits (95), Expect = 1e-04
Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
+ + R+ A+ ++ + +A + V + D +
Sbjct: 229 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 288
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ L FE + I + S + +L A S D+ L++ D GEE + +
Sbjct: 289 TGER-LAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAES-GEELRSVNQLGHG 345
Query: 240 PELLFIH 246
P+++
Sbjct: 346 PQVITTA 352
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 37.5 bits (85), Expect = 0.003
Identities = 8/77 (10%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL-AT 167
+ + + + +++ D ++ + + E++ ++ + + +L A
Sbjct: 263 IYLLVDQRDEWRHKTASRFVVVLDAKTG---ERLAKFE-MGHEIDSINVSQDEKPLLYAL 318
Query: 168 GSADKTVALWDLRNLKL 184
+ DKT+ + D + +
Sbjct: 319 STGDKTLYIHDAESGEE 335
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 437 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.95 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.95 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.92 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.92 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.91 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.9 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.88 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.86 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.86 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.85 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.83 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.77 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.76 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.72 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.7 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.69 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.64 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.61 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.49 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.37 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.32 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.26 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.17 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.16 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.1 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.06 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.04 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.99 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.98 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.96 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.84 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.8 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.74 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.74 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.72 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.69 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.65 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.48 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.44 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.41 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.38 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.28 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.09 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.91 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.89 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.86 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.11 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.04 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.94 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.93 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.83 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.73 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.62 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 96.49 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.3 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 96.26 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 95.93 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 95.86 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 95.85 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 94.01 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 93.52 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 93.49 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 92.59 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 92.17 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 91.83 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 91.38 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.32 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.01 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 88.2 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 87.74 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 87.44 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 87.02 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 85.09 | |
| d2ebsa1 | 427 | Oligoxyloglucan reducing end-specific cellobiohydr | 80.6 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 80.45 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-35 Score=272.78 Aligned_cols=264 Identities=14% Similarity=0.198 Sum_probs=223.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFFEII 95 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~ 95 (437)
+...|.+++|+ |++++|+||+ |+.|++|+.. .+.+..+.|+++...+ ++..|+.|++||+.
T Consensus 50 H~~~V~~v~fs-~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~ 127 (337)
T d1gxra_ 50 HGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCcEEEEEEC-CCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence 45679999999 9999999998 8999999842 3457888999888777 66789999999965
Q ss_pred ecc-----c-cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 96 FTQ-----N-FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 96 ~~~-----~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
... . ..+...+.+++|+| ++.++++++.|+.|++|++. ..+......+|...|.+++|++++.. +++|+
T Consensus 128 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~~~~---~~~~~~~~~~~~~~v~~l~~s~~~~~-~~~~~ 202 (337)
T d1gxra_ 128 APTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISNDGTK-LWTGG 202 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEE
T ss_pred cccccccccccccccccccccccc-cccccccccccccccccccc---cccccccccccccccccccccccccc-ccccc
Confidence 322 1 23456789999999 68899999999999999998 45667778889999999999999995 99999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.|+.|++||+++++. +..+ .|...|.+++|+|+++ .+++|+.|+.+++||++.... .....|
T Consensus 203 ~d~~v~i~d~~~~~~-~~~~-~~~~~i~~l~~~~~~~-~l~~~~~d~~i~i~d~~~~~~---------------~~~~~~ 264 (337)
T d1gxra_ 203 LDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDK---------------YQLHLH 264 (337)
T ss_dssp TTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSCE---------------EEECCC
T ss_pred cccccccccccccee-eccc-ccccceEEEEEccccc-ccceecccccccccccccccc---------------cccccc
Confidence 999999999998664 5444 5889999999999998 589999999999999987542 345688
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
...|++++|+|+++ +|++++.||.|++||+.+++.+.... +...+..++|+|++++|++|+.|+.
T Consensus 265 ~~~i~~v~~s~~g~-~l~s~s~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~d~~~l~t~s~D~~---------- 329 (337)
T d1gxra_ 265 ESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKK---------- 329 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSC----------
T ss_pred ccccceEEECCCCC-EEEEEeCCCeEEEEECCCCCEEEEcc----CCCCEEEEEEeCCCCEEEEEeCCCe----------
Confidence 99999999999999 78899999999999999998776543 4567778899999999999999999
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
|++||+.
T Consensus 330 -I~vWdl~ 336 (337)
T d1gxra_ 330 -ATVYEVI 336 (337)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 7888863
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.4e-34 Score=262.77 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=221.9
Q ss_pred ecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 26 SALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
...|...+. .+..++++ |+++.++.++ ++.+.+|+. |.+.+..+.+++.+..+ ++..|+.|++||
T Consensus 10 ~~~p~~~r~-~~~~~a~~-~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd 86 (311)
T d1nr0a1 10 PSLPRTARG-TAVVLGNT-PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86 (311)
T ss_dssp CCCCCCCTT-CCCCCEEC-TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCCCCC-CeEEEEEc-CCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeee
Confidence 344444443 34567888 9999998885 556888883 45678888899988877 667899999999
Q ss_pred eeeccc------cccCCCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEE
Q psy4571 94 IIFTQN------FPFPLSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 165 (437)
Q Consensus 94 ~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 165 (437)
+..... ..+..+|.+++|+| ++.+|++++. +..++||+++ ..+....+.+|...|.+++|+|+++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~v~~v~~s~-d~~~l~~~~~~~~~~~~v~~~~---~~~~~~~l~~h~~~v~~v~~~~~~~~~l 162 (311)
T d1nr0a1 87 TTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFD---TGTSNGNLTGQARAMNSVDFKPSRPFRI 162 (311)
T ss_dssp SSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETT---TCCBCBCCCCCSSCEEEEEECSSSSCEE
T ss_pred eeccccccccccccccCccccccccc-cccccccccccccccccccccc---cccccccccccccccccccccccceeee
Confidence 765432 12567899999999 6778888875 4569999998 4566778889999999999999999879
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++|+.||.|++||+++.+. ...+..|..+|++++|+|+++ ++++|+.|+.|++||++........... ...
T Consensus 163 ~sgs~d~~i~i~d~~~~~~-~~~~~~~~~~i~~v~~~p~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~-------~~~ 233 (311)
T d1nr0a1 163 ISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDD-------SLK 233 (311)
T ss_dssp EEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCT-------TSS
T ss_pred ccccccccccccccccccc-ccccccccccccccccCcccc-cccccccccccccccccccccccccccc-------ccc
Confidence 9999999999999998554 778889999999999999998 5899999999999999886544332110 012
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
..+|...|++++|+|+++ +|++|+.||.|++||++++++++.+...... ....+.+.+++..+++++.||.
T Consensus 234 ~~~h~~~V~~~~~s~~~~-~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~--~~~~~~~~~~~~~l~s~s~dG~------ 304 (311)
T d1nr0a1 234 NVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRI--EDQQLGIIWTKQALVSISANGF------ 304 (311)
T ss_dssp SCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSG--GGCEEEEEECSSCEEEEETTCC------
T ss_pred cccccccccccccCCCCC-EEEEEeCCCeEEEEECCCCcEEEEEECCCCc--cceEEEEEecCCEEEEEECCCE------
Confidence 457899999999999999 7889999999999999999888877643211 2223456667788999999999
Q ss_pred ccccccccccc
Q psy4571 326 NYWQGLVLFDI 336 (437)
Q Consensus 326 ~~~~~i~~wd~ 336 (437)
|++||.
T Consensus 305 -----i~~wd~ 310 (311)
T d1nr0a1 305 -----INFVNP 310 (311)
T ss_dssp -----EEEEET
T ss_pred -----EEEEeC
Confidence 788875
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-33 Score=257.22 Aligned_cols=262 Identities=17% Similarity=0.246 Sum_probs=222.1
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc-
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN- 99 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~- 99 (437)
+.-.|.+++|+ |++++|+||+.|++|++|+.. .+.+..+.+.+....+ .+..++.+..|+......
T Consensus 16 H~~~I~~l~~s-p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (317)
T d1vyhc1 16 HRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 94 (317)
T ss_dssp CSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred CCCCeEEEEEc-CCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccc
Confidence 45679999999 999999999999999999954 3456667777776666 445666777777543332
Q ss_pred ---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 100 ---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 100 ---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
..+...+.++.|+| ++..+++++.|+.+++||++ ..+....+.+|...+.+++|+|++. +|++++.|+.|++
T Consensus 95 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~~ 169 (317)
T d1vyhc1 95 RTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQ---TGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRV 169 (317)
T ss_dssp ECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred cccccccccceeeeccC-CCceEEeeccCcceeEeecc---cceeeeEEccCCCcceeeecccCCC-EEEEEeCCCeEEE
Confidence 23567889999999 68899999999999999998 5677888899999999999999999 4999999999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCC-------------------cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNE-------------------TILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-------------------~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
|+.++.+. ...+..|...+.+++|+|++. .++++|+.|+.|++||++++
T Consensus 170 ~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~----------- 237 (317)
T d1vyhc1 170 WVVATKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----------- 237 (317)
T ss_dssp EETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-----------
T ss_pred Eeecccee-eEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCC-----------
Confidence 99998665 778889999999999988642 25889999999999999875
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+++..+.+|...|.+++|+|+++ +|++|+.||.|++||+++++++..+.. |...+..++|+|++++|++|+.|
T Consensus 238 ---~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---h~~~V~~~~~s~~~~~l~s~s~D 310 (317)
T d1vyhc1 238 ---MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVTGSVD 310 (317)
T ss_dssp ---EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEEEETT
T ss_pred ---cEEEEEeCCCCCEEEEEECCCCC-EEEEEECCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCC
Confidence 44566889999999999999999 788999999999999999998887764 45667788999999999999999
Q ss_pred Cc
Q psy4571 318 PT 319 (437)
Q Consensus 318 ~~ 319 (437)
++
T Consensus 311 g~ 312 (317)
T d1vyhc1 311 QT 312 (317)
T ss_dssp SE
T ss_pred Ce
Confidence 99
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.9e-34 Score=264.48 Aligned_cols=254 Identities=14% Similarity=0.139 Sum_probs=210.7
Q ss_pred CceeEEEecCCCCeEEEecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe
Q psy4571 67 PFLYDLVVNNYVANISCILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS 142 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 142 (437)
+....+.+++.+..+....++.+.+|++..... ..|...|++++|+| ++++|++|+.||+|++||+.... ....
T Consensus 18 ~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp-~g~~latg~~dg~i~iwd~~~~~-~~~~ 95 (311)
T d1nr0a1 18 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTT-HILK 95 (311)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTT-CCEE
T ss_pred CCeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCCCCEEEEEEeC-CCCeEeccccCceEeeeeeeccc-cccc
Confidence 344455667888888777788899999764432 24678999999999 68999999999999999998542 2233
Q ss_pred eeeccCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE
Q psy4571 143 HTVDAHTAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220 (437)
Q Consensus 143 ~~~~~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v 220 (437)
..+..|.++|.+++|+|++.. |++++. +..+++|++++++. ...+.+|...|++++|+|++++++++|+.|+.|++
T Consensus 96 ~~~~~~~~~v~~v~~s~d~~~-l~~~~~~~~~~~~v~~~~~~~~-~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i 173 (311)
T d1nr0a1 96 TTIPVFSGPVKDISWDSESKR-IAAVGEGRERFGHVFLFDTGTS-NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 173 (311)
T ss_dssp EEEECSSSCEEEEEECTTSCE-EEEEECCSSCSEEEEETTTCCB-CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEE
T ss_pred cccccccCccccccccccccc-cccccccccccccccccccccc-cccccccccccccccccccceeeeccccccccccc
Confidence 567889999999999999995 777775 46699999998665 77888999999999999999987899999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee----ccc
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS----IRS 296 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~ 296 (437)
||+++. +......+|...|+++.|+|+++ ++++++.|+.|++||.+++.....+.... .|.
T Consensus 174 ~d~~~~--------------~~~~~~~~~~~~i~~v~~~p~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~ 238 (311)
T d1nr0a1 174 FEGPPF--------------KFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 238 (311)
T ss_dssp EETTTB--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred cccccc--------------ccccccccccccccccccCcccc-cccccccccccccccccccccccccccccccccccc
Confidence 999875 34556789999999999999999 78899999999999999987766554321 234
Q ss_pred CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc
Q psy4571 297 NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
..+..++|+|+|++|++|+.|+. |++||+.++++++.+..|..
T Consensus 239 ~~V~~~~~s~~~~~l~tgs~Dg~-----------v~iwd~~t~~~~~~l~~~~~ 281 (311)
T d1nr0a1 239 GSVFGLTWSPDGTKIASASADKT-----------IKIWNVATLKVEKTIPVGTR 281 (311)
T ss_dssp SCEEEEEECTTSSEEEEEETTSE-----------EEEEETTTTEEEEEEECCSS
T ss_pred ccccccccCCCCCEEEEEeCCCe-----------EEEEECCCCcEEEEEECCCC
Confidence 55677899999999999999998 89999999999988877754
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.8e-34 Score=269.92 Aligned_cols=303 Identities=16% Similarity=0.184 Sum_probs=223.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
+.-.|.+++|+ |++++|++|+ |++|++|+..++............... ...........+...|++++|+
T Consensus 61 H~~~V~~l~fs-~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~V~~l~~s 130 (388)
T d1erja_ 61 HTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD--------PENLNTSSSPSSDLYIRSVCFS 130 (388)
T ss_dssp CSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------CCCCBEEEEEEC
T ss_pred CCCcEEEEEEC-CCCCEEEEEe-CCeEEEEEecccceEeeeccccccccc--------ccccccccccCCCCCEEEEEEC
Confidence 44679999999 9999999997 899999998877765443211110000 0001111122355679999999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
| ++.+|++|+.||.|++||.. ..+.+....+|...|.++++++++.. +++|+.++.+++||.++... ..... +
T Consensus 131 ~-~~~~l~s~~~dg~v~i~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~-~~~~~-~ 203 (388)
T d1erja_ 131 P-DGKFLATGAEDRLIRIWDIE---NRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQC-SLTLS-I 203 (388)
T ss_dssp T-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEE-EEEEE-C
T ss_pred C-CCCcceeccccccccccccc---cccccccccccccccccccccccccc-ccccccceeeeeeecccccc-ccccc-c
Confidence 9 68999999999999999998 56777888899999999999999985 99999999999999998554 44444 4
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.....++.+.|....+|++|+.|+.|++||.+++....... .......+|...|.+++|+|+++ +|++++.|
T Consensus 204 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~d 275 (388)
T d1erja_ 204 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD-------SENESGTGHKDSVYSVVFTRDGQ-SVVSGSLD 275 (388)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------------CCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeec-------cccccccCCCCCEEEEEECCCCC-EEEEEECC
Confidence 45556666666443479999999999999998876443321 11223457899999999999999 78899999
Q ss_pred CeEEEEeCCCCCCceeee---------eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 273 NIMQEYCDSTDSDTKTMR---------LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
|.|++||++++....... ....+...+..++|+|+|++|++|+.|+. |++||+.+++.+.
T Consensus 276 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~-----------i~vwd~~~~~~~~ 344 (388)
T d1erja_ 276 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-----------VLFWDKKSGNPLL 344 (388)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-----------EEEEETTTCCEEE
T ss_pred CcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCE-----------EEEEECCCCcEEE
Confidence 999999998765432221 22234556677899999999999999998 8999999999999
Q ss_pred hhcCCCcccccc------CCCCCCcccccc-------cccc
Q psy4571 344 QLLGTEEESSDR------HSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 344 ~~~~h~~~~~~~------~~~~~~~~~~~~-------~w~~ 371 (437)
.+.+|.+.+..+ .++|++..++++ +|++
T Consensus 345 ~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~ 385 (388)
T d1erja_ 345 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385 (388)
T ss_dssp EEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence 999999988765 477888877764 7776
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.5e-33 Score=252.15 Aligned_cols=269 Identities=12% Similarity=0.138 Sum_probs=212.4
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC------------CCceeEEEecCCCCeEEEecCceEEEEEeeeccc-
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN------------TPFLYDLVVNNYVANISCILNISILFFEIIFTQN- 99 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~------------~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~- 99 (437)
+.-.|.+++|+ |++++|+||+.|++|++|+.. .+.+..+.+.+.+..++++.|+.+++|+......
T Consensus 11 H~~~V~~l~~s-~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~ 89 (299)
T d1nr0a2 11 HNKAITALSSS-ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD 89 (299)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC
T ss_pred CCCCcEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCcccc
Confidence 34579999999 999999999999999999943 4557788888888888999999999998653221
Q ss_pred ------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 100 ------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 100 ------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
..+...+.+++|+| ++.++++++ ++.+++|+.. +..... ....+.+++|+|++.. |++|+.||.
T Consensus 90 ~~~~~~~~~~~~~~~~~~s~-~g~~~~~~~-~~~i~~~~~~-----~~~~~~--~~~~~~~~~~s~~~~~-l~~g~~dg~ 159 (299)
T d1nr0a2 90 SSKAVANKLSSQPLGLAVSA-DGDIAVAAC-YKHIAIYSHG-----KLTEVP--ISYNSSCVALSNDKQF-VAVGGQDSK 159 (299)
T ss_dssp TTSCCEEECSSCEEEEEECT-TSSCEEEEE-SSEEEEEETT-----EEEEEE--CSSCEEEEEECTTSCE-EEEEETTSE
T ss_pred cccccccccccccccccccc-ccccccccc-cccccccccc-----cccccc--cccccccccccccccc-ccccccccc
Confidence 12456788999999 566665554 6789999865 222222 3446889999999994 999999999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
|++||+++.+........|..+|++++|+|+++ .+++++.|+.|++||+.+...... ...+.+|...|
T Consensus 160 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~~~~~~~~~~~-----------~~~~~~h~~~v 227 (299)
T d1nr0a2 160 VHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA-FLVATDQSRKVIPYSVANNFELAH-----------TNSWTFHTAKV 227 (299)
T ss_dssp EEEEEEETTEEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEEGGGTTEESC-----------CCCCCCCSSCE
T ss_pred ccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccc-----------ccccccccccc
Confidence 999999886643344567899999999999998 589999999999999987654332 22356899999
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVL 333 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~ 333 (437)
++++|+|+++ ++++|+.||.|++||++++........ ..+....+...+++++.+|++++.|++ |++
T Consensus 228 ~~l~~s~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~l~s~s~D~~-----------i~i 294 (299)
T d1nr0a2 228 ACVSWSPDNV-RLATGSLDNSVIVWNMNKPSDHPIIIK-GAHAMSSVNSVIWLNETTIVSAGQDSN-----------IKF 294 (299)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTCTTSCCEEET-TSSTTSCEEEEEEEETTEEEEEETTSC-----------EEE
T ss_pred cccccccccc-ceEEEcCCCEEEEEECCCCCcceEEEe-cCCCCCcEEEEEECCCCEEEEEeCCCE-----------EEE
Confidence 9999999999 888999999999999998766544432 224445566667788899999999999 788
Q ss_pred ccch
Q psy4571 334 FDIL 337 (437)
Q Consensus 334 wd~~ 337 (437)
||+.
T Consensus 295 Wdl~ 298 (299)
T d1nr0a2 295 WNVP 298 (299)
T ss_dssp EECC
T ss_pred Eecc
Confidence 8874
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-33 Score=257.85 Aligned_cols=267 Identities=14% Similarity=0.146 Sum_probs=223.6
Q ss_pred cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccc---------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcC
Q psy4571 64 KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQN---------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~---------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~ 134 (437)
.|+..+..+.+++.+..++++.|+.|++||+..... ..+...|.+++|+| ++.+|++|+.||.|++||+.
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~-dg~~l~s~~~dg~i~iwd~~ 127 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcC-CCCEEEEeeccccccccccc
Confidence 577889999999999999888899999999754322 23456799999999 68899999999999999987
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
.. ..+....+..|...+.+++|+|++.. +++++.|+.|++||+++++. ......|...|.+++|+|++. .+++|+.
T Consensus 128 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~~~~~~~~~~-~~~~~~~~~~v~~l~~s~~~~-~~~~~~~ 203 (337)
T d1gxra_ 128 AP-TPRIKAELTSSAPACYALAISPDSKV-CFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGT-KLWTGGL 203 (337)
T ss_dssp CC---EEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred cc-cccccccccccccccccccccccccc-cccccccccccccccccccc-ccccccccccccccccccccc-ccccccc
Confidence 43 23455677889999999999999984 99999999999999998654 677788999999999999998 5889999
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 294 (437)
|+.|++||+++++. +. ...|...|.+++|+|+++ ++++++.|+.+++||+++++.... ..
T Consensus 204 d~~v~i~d~~~~~~--------------~~-~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~----~~ 263 (337)
T d1gxra_ 204 DNTVRSWDLREGRQ--------------LQ-QHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQL----HL 263 (337)
T ss_dssp TSEEEEEETTTTEE--------------EE-EEECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSCEEEE----CC
T ss_pred ccccccccccccee--------------ec-ccccccceEEEEEccccc-ccceeccccccccccccccccccc----cc
Confidence 99999999987532 22 235788999999999999 788999999999999998765432 22
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+...+..++|+|+|+++++++.|+. +++||+.+++.+..+ +|...+..+.++|+++.++++
T Consensus 264 ~~~~i~~v~~s~~g~~l~s~s~Dg~-----------i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~ 324 (337)
T d1gxra_ 264 HESCVLSLKFAYCGKWFVSTGKDNL-----------LNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSE-----------EEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEE
T ss_pred cccccceEEECCCCCEEEEEeCCCe-----------EEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEE
Confidence 5566778899999999999999998 899999999887665 466789999999999877654
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.3e-32 Score=255.74 Aligned_cols=250 Identities=13% Similarity=0.153 Sum_probs=198.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
-.|.|++|+ |++++|++|+.|+.|++|+..++....... -..|..+|.+++|+|
T Consensus 8 ~pIt~~~~s-~dg~~la~~~~~~~i~iw~~~~~~~~~~~~------------------------l~gH~~~V~~l~fsp- 61 (371)
T d1k8kc_ 8 EPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHE------------------------LKEHNGQVTGVDWAP- 61 (371)
T ss_dssp SCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEE------------------------EECCSSCEEEEEEET-
T ss_pred CCeEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCEEEEEE------------------------ecCCCCCEEEEEECC-
Confidence 448999999 999999999999999999976654322210 012457889999999
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee---eeEecc
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFES 191 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~---~~~~~~ 191 (437)
++++|++|+.|++|++||+... .......+.+|...|.+++|+|+++. |++|+.|++|++|++...... ......
T Consensus 62 ~~~~l~s~s~D~~i~vWd~~~~-~~~~~~~~~~~~~~v~~i~~~p~~~~-l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~ 139 (371)
T d1k8kc_ 62 DSNRIVTCGTDRNAYVWTLKGR-TWKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKP 139 (371)
T ss_dssp TTTEEEEEETTSCEEEEEEETT-EEEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCeEEEEeeccc-cccccccccccccccccccccccccc-ceeecccCcceeeeeecccccccccccccc
Confidence 6889999999999999999743 23345566788999999999999995 999999999999998764431 233457
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC----CCCCCCceEEEecCccccEEEEEEccCCCeEEE
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~ 267 (437)
|...|.+++|+|+++ +|++|+.|+.|++||+........... ........+....+|...|.+++|+|+++ .++
T Consensus 140 ~~~~v~~v~~~p~~~-~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 217 (371)
T d1k8kc_ 140 IRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVA 217 (371)
T ss_dssp CCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEE
T ss_pred ccccccccccccccc-ceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccc-ccc
Confidence 889999999999998 589999999999999977543332211 11122356677789999999999999999 788
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+++.|+.|++||+++++.+..+.. +...+..++|+|+++++++|..+
T Consensus 218 s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~s~~fs~d~~~la~g~d~ 264 (371)
T d1k8kc_ 218 WVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESSLVAAGHDC 264 (371)
T ss_dssp EEETTTEEEEEEGGGTTEEEEEEC---SSCCEEEEEEEETTEEEEEETTS
T ss_pred ccccCCcceEEeeecccceeeeec---ccccceeeeecCCCCEEEEEcCC
Confidence 999999999999999887776653 44567788999999999988744
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5e-31 Score=242.95 Aligned_cols=271 Identities=14% Similarity=0.231 Sum_probs=216.2
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeE-EEecCceEEEEEeeec
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFT 97 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~ 97 (437)
++=+.-.|.+++|+ |++++|+||+.|++|++|+.. .+.+..+.+.+....+ ++..++.+.+|+....
T Consensus 51 L~GH~~~I~~l~~s-~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 51 LRGHLAKIYAMHWG-TDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp ECCCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred ECCCCCCEEEEEEC-CCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccc
Confidence 34456779999999 999999999999999999954 4557777888877766 5678889999985432
Q ss_pred cc-------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 98 QN-------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 98 ~~-------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
.. +............. ....+..+..++....+... ..........+...+....+.+.+. ++++|+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 204 (340)
T d1tbga_ 130 EGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIE---TGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGAC 204 (340)
T ss_dssp CSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETT---TTEEEEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred ccccccceecccccccccccccc-cccccccccccccccccccc---cccccccccccceeEeeeccccccc-eeEEeec
Confidence 21 11122233333333 35677788889999988887 3445556667788899999999888 5999999
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
|+.|++||+++++. +..+.+|...|++++|+|+++ +|++|+.|+.|++||++....... .....|.
T Consensus 205 d~~v~i~d~~~~~~-~~~~~~h~~~i~~v~~~p~~~-~l~s~s~d~~i~~~~~~~~~~~~~------------~~~~~~~ 270 (340)
T d1tbga_ 205 DASAKLWDVREGMC-RQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMT------------YSHDNII 270 (340)
T ss_dssp TTEEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEE------------ECCTTCC
T ss_pred CceEEEEECCCCcE-EEEEeCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeecccccccc------------ccccccc
Confidence 99999999998655 788899999999999999998 589999999999999987543221 2245667
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
..|.+++|+|+++ +|++|+.||.|++||+.+++++..+.. |...+..++|+|++.+|++|+.|+.
T Consensus 271 ~~i~~~~~s~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~---H~~~V~~l~~s~d~~~l~s~s~Dg~----------- 335 (340)
T d1tbga_ 271 CGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAG---HDNRVSCLGVTDDGMAVATGSWDSF----------- 335 (340)
T ss_dssp SCEEEEEECSSSC-EEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTSC-----------
T ss_pred CceEEEEECCCCC-EEEEEECCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEccCCE-----------
Confidence 7899999999999 788999999999999999988777654 4566778899999999999999999
Q ss_pred ccccc
Q psy4571 331 LVLFD 335 (437)
Q Consensus 331 i~~wd 335 (437)
|++||
T Consensus 336 v~iWd 340 (340)
T d1tbga_ 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77776
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-31 Score=241.34 Aligned_cols=271 Identities=17% Similarity=0.184 Sum_probs=234.8
Q ss_pred eecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 62 WKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
...|.+.+..+.|++....+ +++.|++|++||+...+.. .+...|.+++|+| ++.+++++..++.+.+|+..
T Consensus 13 L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 89 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ-- 89 (317)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT--
T ss_pred EcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeec-cccccccccccccccccccc--
Confidence 45788999999999988866 7788999999997654432 2567899999999 78899999999999999988
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
.......+.+|...+.++.|+|++.. +++++.|+.+++||+++++. ...+..|...+.+++|+|++. +|++|+.|+
T Consensus 90 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~ 165 (317)
T d1vyhc1 90 -GFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGT-LIASCSNDQ 165 (317)
T ss_dssp -SSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred -ccccccccccccccceeeeccCCCce-EEeeccCcceeEeeccccee-eeEEccCCCcceeeecccCCC-EEEEEeCCC
Confidence 55666777889999999999999995 99999999999999999665 778889999999999999998 599999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-------------------eEEEEEeCCCeEEE
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-------------------WVICSVSEDNIMQE 277 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-------------------~~l~s~~~dg~i~i 277 (437)
.|++|++.... .+..+.+|...+.+++|+|++. .++++++.|+.|++
T Consensus 166 ~v~~~~~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 231 (317)
T d1vyhc1 166 TVRVWVVATKE--------------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 231 (317)
T ss_dssp CEEEEETTTCC--------------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred eEEEEeeccce--------------eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEE
Confidence 99999998864 3455778888999999987542 26889999999999
Q ss_pred EeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCC
Q psy4571 278 YCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS 357 (437)
Q Consensus 278 wd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~ 357 (437)
||+++++++..+.. +...+..++++|++++|++|+.|+. |++||+.+++.+..+.+|.+.+.++.+
T Consensus 232 ~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~-----------i~iwd~~~~~~~~~~~~h~~~V~~~~~ 297 (317)
T d1vyhc1 232 WDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKT-----------LRVWDYKNKRCMKTLNAHEHFVTSLDF 297 (317)
T ss_dssp EETTTTEEEEEEEC---CSSCEEEEEECSSSSCEEEEETTTE-----------EEEECCTTSCCCEEEECCSSCEEEEEE
T ss_pred EECCCCcEEEEEeC---CCCCEEEEEECCCCCEEEEEECCCe-----------EEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 99999987777654 4566777899999999999999998 899999999999999999999999999
Q ss_pred CCCCcccccc
Q psy4571 358 SDNDTEDLNS 367 (437)
Q Consensus 358 ~~~~~~~~~~ 367 (437)
+|++..++++
T Consensus 298 s~~~~~l~s~ 307 (317)
T d1vyhc1 298 HKTAPYVVTG 307 (317)
T ss_dssp CSSSSCEEEE
T ss_pred cCCCCEEEEE
Confidence 9999877764
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.2e-32 Score=255.85 Aligned_cols=238 Identities=14% Similarity=0.132 Sum_probs=196.6
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+|+|++|+| ++.+||+|+.||.|+|||...+ ....+..+.+|.++|.+++|+|++.+ |++|+.|++|++||+++.
T Consensus 7 ~~pIt~~~~s~-dg~~la~~~~~~~i~iw~~~~~-~~~~~~~l~gH~~~V~~l~fsp~~~~-l~s~s~D~~i~vWd~~~~ 83 (371)
T d1k8kc_ 7 VEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYVWTLKGR 83 (371)
T ss_dssp SSCCCEEEECT-TSSEEEEECSSSEEEEEEEETT-EEEEEEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEEEETT
T ss_pred CCCeEEEEECC-CCCEEEEEeCCCEEEEEECCCC-CEEEEEEecCCCCCEEEEEECCCCCE-EEEEECCCeEEEEeeccc
Confidence 36799999999 6899999999999999999743 23467788899999999999999995 999999999999999875
Q ss_pred ce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.. +...+..|...|++++|+|+++ .|++|+.|+.|++|++....... .......+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~s~d~~i~i~~~~~~~~~~----------~~~~~~~~~~~~v~~v~~~p~ 152 (371)
T d1k8kc_ 84 TWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWW----------VCKHIKKPIRSTVLSLDWHPN 152 (371)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEE----------EEEEECTTCCSCEEEEEECTT
T ss_pred ccccccccccccccccccccccccc-cceeecccCcceeeeeecccccc----------ccccccccccccccccccccc
Confidence 43 2445667899999999999998 58999999999999987654321 223446688999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCce---------------eeeeeecccCCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTK---------------TMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~---------------~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
++ +|++|+.|+.+++||........ .+.....+...+..++|+|+|+.+++++.|+.
T Consensus 153 ~~-~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~------- 224 (371)
T d1k8kc_ 153 SV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST------- 224 (371)
T ss_dssp SS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-------
T ss_pred cc-ceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCc-------
Confidence 99 78999999999999987653221 11111223445667799999999999999998
Q ss_pred cccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 327 YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+++||+.+++.+..+.+|..++..+.|+|++..++.
T Consensus 225 ----i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~ 260 (371)
T d1k8kc_ 225 ----VCLADADKKMAVATLASETLPLLAVTFITESSLVAA 260 (371)
T ss_dssp ----EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE
T ss_pred ----ceEEeeecccceeeeecccccceeeeecCCCCEEEE
Confidence 899999999999999999999999999999887654
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.4e-30 Score=234.45 Aligned_cols=268 Identities=13% Similarity=0.159 Sum_probs=203.1
Q ss_pred eEEEEeeCCCcceEEEeeccC-ceEeeec--------------CCCceeEEEecCC--CCeE-EEecCceEEEEEeeecc
Q psy4571 37 FYRLCVAEPFDDAVEERVINE-EYKIWKK--------------NTPFLYDLVVNNY--VANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~-~v~iw~~--------------~~~~~~~~~~~~~--~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
+.+++|+ |.++.++.++.+. .++.|+. ++..+..+.|+|. ...+ ++..|++|++||.....
T Consensus 20 ~t~l~~~-~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~ 98 (325)
T d1pgua1 20 TTHLSYD-PTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 98 (325)
T ss_dssp CCCCEEE-TTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred eEEEEEC-CCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence 4678899 9999998886554 4677772 1356888888763 3455 56789999999975433
Q ss_pred cc------------ccCCCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 99 NF------------PFPLSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 99 ~~------------~~~~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
.. .+..+|.+++|+| ++.++++++. ++.+++|+.+ ..+.+..+.+|...|.+++|+|+++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~ 174 (325)
T d1pgua1 99 ESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD---SGNSLGEVSGHSQRINACHLKQSRPMR 174 (325)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT---TCCEEEECCSCSSCEEEEEECSSSSCE
T ss_pred ceeeeecccccccccccCcEEEEEECC-CCCccceeeccccceEEEEeec---ccccceeeeecccccccccccccccce
Confidence 21 2456799999999 5677766654 6789999998 567788889999999999999999877
Q ss_pred EEEEeCCCeEEEEeCCCCceeee--EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 165 LATGSADKTVALWDLRNLKLKLH--SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
+++++.|+.+++||+...+.... ....|...|++++|+|++..++++|+.|+.|++||+++++ .
T Consensus 175 ~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~--------------~ 240 (325)
T d1pgua1 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--------------F 240 (325)
T ss_dssp EEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--------------E
T ss_pred EEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccc--------------c
Confidence 88999999999999987554222 2346778899999999865579999999999999998764 3
Q ss_pred EEEecCccccEEEEEEc---cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCC-CCcccccCCCC
Q psy4571 243 LFIHGGHTAKISDFSWN---PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPT-ASSTASESPTP 318 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~---p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~l~s~s~d~ 318 (437)
+..+.+|..++.++.|+ |+++ +|++++.|+.|++||++++++++.+.... +......+++.+. +..+++++.|+
T Consensus 241 ~~~l~~~~~~v~~~~~s~~~~dg~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~dg 318 (325)
T d1pgua1 241 LKYIEDDQEPVQGGIFALSWLDSQ-KFATVGADATIRVWDVTTSKCVQKWTLDK-QQLGNQQVGVVATGNGRIISLSLDG 318 (325)
T ss_dssp EEECCBTTBCCCSCEEEEEESSSS-EEEEEETTSEEEEEETTTTEEEEEEECCT-TCGGGCEEEEEEEETTEEEEEETTS
T ss_pred cccccccccccccceeeeeccCCC-EEEEEeCCCeEEEEECCCCCEEEEEEecC-CcccCeEEEEEECCCCEEEEEECCC
Confidence 45567777776655555 6777 78899999999999999998888776543 2222333344332 34688899999
Q ss_pred cccccccccccccccccc
Q psy4571 319 TNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~ 336 (437)
. |++||+
T Consensus 319 ~-----------i~vwdl 325 (325)
T d1pgua1 319 T-----------LNFYEL 325 (325)
T ss_dssp C-----------EEEEET
T ss_pred E-----------EEEEEC
Confidence 9 788875
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.6e-29 Score=233.71 Aligned_cols=282 Identities=15% Similarity=0.190 Sum_probs=214.1
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc----
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP---- 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~---- 101 (437)
+.|++| ++++|+||+.|++|++||. |.+.+..+.+++....++++.|+.|++|+........
T Consensus 16 itc~~~---~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 92 (355)
T d1nexb2 16 ITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG 92 (355)
T ss_dssp EEEEEE---ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEEEE---CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEeccccccccccccccccccccc
Confidence 455555 4789999999999999994 4566778888777666688999999999966543321
Q ss_pred --cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC--------------------CCeeeeccCCCCeEEEEEeC
Q psy4571 102 --FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS--------------------KPSHTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 102 --~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~--------------------~~~~~~~~h~~~v~~l~~~~ 159 (437)
.......+.+++ ++..+++++.|+.|++||+...... ........|...+... .+
T Consensus 93 ~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 169 (355)
T d1nexb2 93 HNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 169 (355)
T ss_dssp CSSCEEEEEEEEET-TEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEE--EE
T ss_pred cccccccccccccc-ccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccc--cc
Confidence 122345566777 6788999999999999998753211 1112223344445443 45
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
++. +++++..|+.|++||+++++. +....++...+.++.++|+++ .+++++.|+.|++||++++.
T Consensus 170 ~~~-~~~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~------------ 234 (355)
T d1nexb2 170 HGN-IVVSGSYDNTLIVWDVAQMKC-LYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGE------------ 234 (355)
T ss_dssp ETT-EEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTCC------------
T ss_pred ccc-eeeeecccceeeeeecccccc-eeeeeccccccccccccccce-eeecccccceEEeeeccccc------------
Confidence 566 599999999999999998665 777888899999999999998 58899999999999998763
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee-eecCCCCcccccCCCC
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS-TASPTASSTASESPTP 318 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~s~s~d~ 318 (437)
.+..+.+|...|.++++++ + ++++++.||.|++||++++... +.. +......+ .+++++.++++|+ |+
T Consensus 235 --~~~~~~~h~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~g~-d~ 303 (355)
T d1nexb2 235 --LMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRK--FSY---HHTNLSAITTFYVSDNILVSGS-EN 303 (355)
T ss_dssp --EEEEECCCSSCCCEEEECS--S-EEEEECTTSEEEEEETTTCCEE--EEE---ECTTCCCCCEEEECSSEEEEEE-TT
T ss_pred --ccccccccccccccccccc--c-eeeeeeccccccccccccccee--ccc---ccCCceEEEEEcCCCCEEEEEe-CC
Confidence 4556889999999999975 3 7889999999999999987543 222 23333333 6788888887775 66
Q ss_pred cccccccccccccccccchhhhhhh-hhcCCCccccccCCCCCC
Q psy4571 319 TNSVHEKNYWQGLVLFDILVCEEQR-QLLGTEEESSDRHSSDND 361 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~~~~~~~~-~~~~h~~~~~~~~~~~~~ 361 (437)
. |++||+.+|+.++ .+.+|.+.+.++.++|+.
T Consensus 304 ~-----------i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~ 336 (355)
T d1nexb2 304 Q-----------FNIYNLRSGKLVHANILKDADQIWSVNFKGKT 336 (355)
T ss_dssp E-----------EEEEETTTCCBCCSCTTTTCSEEEEEEEETTE
T ss_pred E-----------EEEEECCCCCEEEEEecCCCCCEEEEEEcCCe
Confidence 6 8999999999885 578999999999888764
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=4.4e-29 Score=229.75 Aligned_cols=278 Identities=16% Similarity=0.205 Sum_probs=230.9
Q ss_pred ceEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEE
Q psy4571 58 EYKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWD 132 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd 132 (437)
..|....|.+.+.++.|++....+ +++.|+.|++||....+.. .+...|.+++|+| ++.++++|+.|+.+++|+
T Consensus 47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~d~~i~~~~ 125 (340)
T d1tbga_ 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeec-cceeeeeecccceeeccc
Confidence 456778899999999999988866 7778999999997655432 2567899999999 688999999999999999
Q ss_pred cCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE
Q psy4571 133 TRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 133 ~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 211 (437)
...... ......+.+|..........++. .+..+..|.....+....... ......+...+....+.+.+. ++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 201 (340)
T d1tbga_ 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQ-TTTFTGHTGDVMSLSLAPDTR-LFVS 201 (340)
T ss_dssp SSSSCSCCCEEEEECCCSSCEEEEEEEETT--EEEEEETTTEEEEEETTTTEE-EEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred ccccccccccceeccccccccccccccccc--ccccccccccccccccccccc-cccccccceeEeeeccccccc-eeEE
Confidence 875432 23445667788777766666544 488899999999999988554 556667788899999999887 6899
Q ss_pred EeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 212 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|+.|+.|++||++++ +.+..+.+|...|++++|+|+++ ++++|+.||.|++||++.......+..
T Consensus 202 ~~~d~~v~i~d~~~~--------------~~~~~~~~h~~~i~~v~~~p~~~-~l~s~s~d~~i~~~~~~~~~~~~~~~~ 266 (340)
T d1tbga_ 202 GACDASAKLWDVREG--------------MCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp EETTTEEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eecCceEEEEECCCC--------------cEEEEEeCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeeccccccccccc
Confidence 999999999999875 44566889999999999999999 788999999999999998766555432
Q ss_pred eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
..+...+..++|+|+|.++++|+.|+. |++||+.+++.+..+.+|.+.+.++.++|++..++++
T Consensus 267 -~~~~~~i~~~~~s~~~~~l~~g~~dg~-----------i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~ 330 (340)
T d1tbga_ 267 -DNIICGITSVSFSKSGRLLLAGYDDFN-----------CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp -TTCCSCEEEEEECSSSCEEEEEETTSC-----------EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred -ccccCceEEEEECCCCCEEEEEECCCE-----------EEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 224455677899999999999999998 8999999999999999999999999999999877754
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.5e-29 Score=233.70 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=190.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...|.+++|+ |++++|++|+.|+.|++|+...+....... .+...|.+++|++
T Consensus 121 ~~~V~~l~~s-~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~--------------------------~h~~~v~~~~~~~ 173 (388)
T d1erja_ 121 DLYIRSVCFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQ--------------------------GHEQDIYSLDYFP 173 (388)
T ss_dssp CCBEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------------CCSSCEEEEEECT
T ss_pred CCCEEEEEEC-CCCCcceecccccccccccccccccccccc--------------------------ccccccccccccc
Confidence 4458899999 999999999999999999987665543321 2345788999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeE----
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHS---- 188 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~---- 188 (437)
++..+++|+.+|.+++||.. ..........+ ....++.+++ ++. +|++|+.||.|++||.+++.. ...
T Consensus 174 -~~~~~~~~~~~~~i~~~d~~---~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~-~~~~~~~ 246 (388)
T d1erja_ 174 -SGDKLVSGSGDRTVRIWDLR---TGQCSLTLSIE-DGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGFL-VERLDSE 246 (388)
T ss_dssp -TSSEEEEEETTSEEEEEETT---TTEEEEEEECS-SCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCCE-EEEEC--
T ss_pred -ccccccccccceeeeeeecc---ccccccccccc-cccccccccCCCCC-eEEEEcCCCeEEEeecccCcc-ceeeccc
Confidence 68889999999999999998 34444444444 4555666665 555 699999999999999998654 332
Q ss_pred ---eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 189 ---FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 189 ---~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
..+|...|.+++|+|+++ .|++|+.||.|++||++.......... ............|...|.+++|+|+++ +
T Consensus 247 ~~~~~~h~~~v~~l~~s~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 322 (388)
T d1erja_ 247 NESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKT--PNSGTCEVTYIGHKDFVLSVATTQNDE-Y 322 (388)
T ss_dssp ----CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGC-E
T ss_pred cccccCCCCCEEEEEECCCCC-EEEEEECCCcEEEEeccCCcccccccc--ccccceeeecccccceEEEEEECCCCC-E
Confidence 246889999999999998 589999999999999988765433211 112244556778999999999999999 7
Q ss_pred EEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee------eecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 266 ICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS------TASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 266 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
|++|+.||.|++||+++++++..+.. |...+..+ .|+|++.+|++|+.|++ |++||++
T Consensus 323 l~sg~~dg~i~vwd~~~~~~~~~l~~---H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~-----------I~iW~~~ 386 (388)
T d1erja_ 323 ILSGSKDRGVLFWDKKSGNPLLMLQG---HRNSVISVAVANGSSLGPEYNVFATGSGDCK-----------ARIWKYK 386 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECSSCTTCTTCEEEEEEETTSE-----------EEEEEEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEeC---CCCCEEEEEEecCcccCCCCCEEEEEeCCCE-----------EEEEeee
Confidence 88999999999999999998887764 34444443 47889999999999999 7888874
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.7e-29 Score=232.76 Aligned_cols=259 Identities=11% Similarity=0.082 Sum_probs=195.0
Q ss_pred ceeEEEecCCCCeEEEecCce--EEEEEeeecc-----c-ccc-CCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCC
Q psy4571 68 FLYDLVVNNYVANISCILNIS--ILFFEIIFTQ-----N-FPF-PLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHN 137 (437)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~~~~--i~~~~~~~~~-----~-~~~-~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~ 137 (437)
....+.+++.+..+....... ++.|+..... . ..+ ...|++++|+|. ++.+|++|+.||+|+|||+....
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~ 98 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 98 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence 345566777777776554444 4555532211 1 112 357999999984 46799999999999999997432
Q ss_pred CCCCe-----eeeccCCCCeEEEEEeCCCCcEEEEEe--CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEE
Q psy4571 138 VSKPS-----HTVDAHTAEVNCLSFNPYSEYILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 210 (437)
Q Consensus 138 ~~~~~-----~~~~~h~~~v~~l~~~~~~~~~l~sgs--~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 210 (437)
..... ..+..|.++|.+++|++++++ +++++ .++.+++|+.++++. +..+.+|...|.+++|+|+++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~ 176 (325)
T d1pgua1 99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRR-LCVVGEGRDNFGVFISWDSGNS-LGEVSGHSQRINACHLKQSRPMRSM 176 (325)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECTTSSE-EEEEECCSSCSEEEEETTTCCE-EEECCSCSSCEEEEEECSSSSCEEE
T ss_pred ceeeeecccccccccccCcEEEEEECCCCCc-cceeeccccceEEEEeeccccc-ceeeeecccccccccccccccceEE
Confidence 22211 234578899999999999996 65554 477899999998665 7888899999999999999987788
Q ss_pred EEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 211 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 211 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
+++.|+.+++||+...+.... .....+|...|.+++|+|++..++++++.|+.|++||+++++.+..+.
T Consensus 177 ~~~~d~~v~~~d~~~~~~~~~-----------~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~ 245 (325)
T d1pgua1 177 TVGDDGSVVFYQGPPFKFSAS-----------DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245 (325)
T ss_dssp EEETTTEEEEEETTTBEEEEE-----------ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred Eeeccccccccccccccccee-----------cccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccc
Confidence 999999999999876543221 222457788899999999865589999999999999999998877776
Q ss_pred eeecccCCceeeeec---CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 291 LDSIRSNGGISSTAS---PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s---~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
.+. .......|+ |+|++|++++.|+. |++||+.+++.++.+..|...+.
T Consensus 246 ~~~---~~v~~~~~s~~~~dg~~l~s~s~D~~-----------i~iwd~~~~~~~~~~~~~~~~~~ 297 (325)
T d1pgua1 246 DDQ---EPVQGGIFALSWLDSQKFATVGADAT-----------IRVWDVTTSKCVQKWTLDKQQLG 297 (325)
T ss_dssp BTT---BCCCSCEEEEEESSSSEEEEEETTSE-----------EEEEETTTTEEEEEEECCTTCGG
T ss_pred ccc---cccccceeeeeccCCCEEEEEeCCCe-----------EEEEECCCCCEEEEEEecCCccc
Confidence 432 233333333 89999999999998 89999999999988877765443
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.5e-28 Score=230.93 Aligned_cols=275 Identities=13% Similarity=0.139 Sum_probs=191.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-------eeE----------EE-----e-cCCCC-eE-EEecC
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-------LYD----------LV-----V-NNYVA-NI-SCILN 86 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-------~~~----------~~-----~-~~~~~-~i-~~~~~ 86 (437)
=+.-.|++++++ ++.++|+|.|++||+|+..+.. ... .. . .+... .+ ++..|
T Consensus 12 ~H~~~I~~v~~~---~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d 88 (393)
T d1sq9a_ 12 AHDADIFSVSAC---NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 88 (393)
T ss_dssp CSSSCEEEEEEC---SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred cccCccEEEEEe---CCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCC
Confidence 345578888876 3689999999999999954321 110 00 0 11111 12 56679
Q ss_pred ceEEEEEeeecccc--------------ccCCCcceEEeeCCC----CCEEEEEECCCcEEEEEcCCCCC--------CC
Q psy4571 87 ISILFFEIIFTQNF--------------PFPLSRQDVAWHLLH----ESLFGSVADDQKLMIWDTRSHNV--------SK 140 (437)
Q Consensus 87 ~~i~~~~~~~~~~~--------------~~~~~v~~~~~sp~~----~~~l~~~~~dg~v~vwd~~~~~~--------~~ 140 (437)
+.+++|+....... ..+..+..++|.+.. ..++++++.||.+++|++..... ..
T Consensus 89 g~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 168 (393)
T d1sq9a_ 89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS 168 (393)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred CcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeec
Confidence 99999986543221 123456778888743 36889999999999999853210 00
Q ss_pred -------CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee------EeccCCCceEEEEEcCCCCc
Q psy4571 141 -------PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH------SFESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 141 -------~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~------~~~~h~~~v~~v~~~p~~~~ 207 (437)
.......+...+.+++|+|++ +|++|+.||+|++||+++++. +. .+.+|..+|.+++|+|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs~Dg~i~iwd~~~~~~-~~~~~~~~~l~~h~~~V~~l~~spdg~- 244 (393)
T d1sq9a_ 169 PTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGS- 244 (393)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECSSTT-
T ss_pred cceecccceecccCCCCcEEEEEECCCC--EEEEEeCCCcEEEEeeccccc-ccccccccccccccceEEEcccccccc-
Confidence 111122445668999999987 499999999999999998654 33 3457899999999999998
Q ss_pred EEEEEeCCC---eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 208 ILASSGTDR---RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 208 ~l~sg~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+|++|+.|+ .|++||++++.....+... .........+.+|...|++++|+|+++ +|+||+.|++|++||+++++
T Consensus 245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~-~~~~~~~~~~~gH~~~V~~l~fspd~~-~l~S~s~D~~v~vWd~~~g~ 322 (393)
T d1sq9a_ 245 LLAIAHDSNSFGCITLYETEFGERIGSLSVP-THSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTKE 322 (393)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC---------CCBSBSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTE
T ss_pred eeeeecCCCCcceeeecccccceeeeeeccc-cccccceeeeecccCceeeeccCCCCC-eeEEECCCCEEEEEECCCCC
Confidence 589999887 4999999987655443211 112233344679999999999999999 89999999999999999998
Q ss_pred Cceeeeeeeccc-CCceeeeecCCCCcccccC
Q psy4571 285 DTKTMRLDSIRS-NGGISSTASPTASSTASES 315 (437)
Q Consensus 285 ~~~~~~~~~~~~-~~~~~~~~s~~g~~l~s~s 315 (437)
++.++..+.... .....++++|+|..+++++
T Consensus 323 ~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 323 RITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred EEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence 888876432111 1223468999999988775
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1e-28 Score=224.16 Aligned_cols=273 Identities=12% Similarity=0.072 Sum_probs=204.3
Q ss_pred ceEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc-----ccCCCcceEEeeCCCCCEEEEEECCCcEEEE
Q psy4571 58 EYKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF-----PFPLSRQDVAWHLLHESLFGSVADDQKLMIW 131 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vw 131 (437)
..++...|.+.+..+.+++++..+ +++.|+.|++||+..++.. .+...|++++|+| ++. +++++.|+.+++|
T Consensus 4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~-~g~-~~~~~~d~~v~~~ 81 (299)
T d1nr0a2 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS-KGD-LFTVSWDDHLKVV 81 (299)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-TSC-EEEEETTTEEEEE
T ss_pred cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeec-cce-eecccceeeEEEe
Confidence 357888999999999999988876 7788999999997654432 2466899999999 455 4567789999999
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 211 (437)
+...............+...+.+++|+|++.. ++++ .++.+++|+... . .... ....+.+++|+|+++ ++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-~~~~-~~~~i~~~~~~~--~-~~~~--~~~~~~~~~~s~~~~-~l~~ 153 (299)
T d1nr0a2 82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDI-AVAA-CYKHIAIYSHGK--L-TEVP--ISYNSSCVALSNDKQ-FVAV 153 (299)
T ss_dssp CSSSSSSCTTSCCEEECSSCEEEEEECTTSSC-EEEE-ESSEEEEEETTE--E-EEEE--CSSCEEEEEECTTSC-EEEE
T ss_pred ccCCcccccccccccccccccccccccccccc-cccc-cccccccccccc--c-cccc--ccccccccccccccc-cccc
Confidence 98754333333444567888999999999984 5544 567899999653 2 2222 345678999999998 5899
Q ss_pred EeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 212 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|+.||.|++||+++.... ......|...|++++|+|+++ ++++++.|+.|++||+.++........
T Consensus 154 g~~dg~i~~~d~~~~~~~-------------~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~~~~~~~~~~~~~~ 219 (299)
T d1nr0a2 154 GGQDSKVHVYKLSGASVS-------------EVKTIVHPAEITSVAFSNNGA-FLVATDQSRKVIPYSVANNFELAHTNS 219 (299)
T ss_dssp EETTSEEEEEEEETTEEE-------------EEEEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred cccccccccccccccccc-------------ccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 999999999999765321 122457888999999999999 788999999999999988766555444
Q ss_pred eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh--cC-CCccccccCCCCCCccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL--LG-TEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~--~~-h~~~~~~~~~~~~~~~~~~ 366 (437)
...+...+..++|+|++.++++|+.|+. +++||+.+++....+ .+ +...+..+.+ +++..+++
T Consensus 220 ~~~h~~~v~~l~~s~~~~~l~sgs~dg~-----------i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s 285 (299)
T d1nr0a2 220 WTFHTAKVACVSWSPDNVRLATGSLDNS-----------VIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVS 285 (299)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSC-----------EEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEE
T ss_pred ccccccccccccccccccceEEEcCCCE-----------EEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEE
Confidence 4445566777899999999999999998 899998887654333 23 3344555544 44444443
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.3e-29 Score=237.02 Aligned_cols=291 Identities=11% Similarity=0.119 Sum_probs=209.3
Q ss_pred ceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccc----------cccCCCcceE------EeeCCCCCEEEE
Q psy4571 58 EYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQN----------FPFPLSRQDV------AWHLLHESLFGS 121 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~----------~~~~~~v~~~------~~sp~~~~~l~~ 121 (437)
++.+.+.|.+.++++...+ ...++++.|+.|++||....+. ..+...+..+ ..+.....++++
T Consensus 6 ~~~~~~~H~~~I~~v~~~~-~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 6 TANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EEEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred eeecCCcccCccEEEEEeC-CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 3466778999999998765 3566999999999999654321 1122222222 222223457889
Q ss_pred EECCCcEEEEEcCCCCCCCCeeee-------ccCCCCeEEEEEeCCCC----cEEEEEeCCCeEEEEeCCCCce------
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTV-------DAHTAEVNCLSFNPYSE----YILATGSADKTVALWDLRNLKL------ 184 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~-------~~h~~~v~~l~~~~~~~----~~l~sgs~dg~i~lwd~~~~~~------ 184 (437)
++.||.|++|++............ ..+...+..++|.+++. ..+++++.||++++|++.....
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~ 164 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence 999999999998754333222211 23445688888887642 3589999999999999853210
Q ss_pred -----------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 185 -----------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 185 -----------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
.......+...+++++|+|++ +|++|+.||+|++||+.+++..... +....+.+|..+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs~Dg~i~iwd~~~~~~~~~~--------~~~~~l~~h~~~V 234 (393)
T d1sq9a_ 165 LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNF--------ESQHSMINNSNSI 234 (393)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEE--------ECCC---CCCCCE
T ss_pred eeeccceecccceecccCCCCcEEEEEECCCC--EEEEEeCCCcEEEEeeccccccccc--------ccccccccccceE
Confidence 011122345668999999987 5899999999999999886543321 1122356899999
Q ss_pred EEEEEccCCCeEEEEEeCCC---eEEEEeCCCCCCceeeeee----------ecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 254 SDFSWNPNEPWVICSVSEDN---IMQEYCDSTDSDTKTMRLD----------SIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
++++|+|+|+ +|++|+.|+ .|++||+++++++..+... ..|...+..++|+|+|++|++++.|++
T Consensus 235 ~~l~~spdg~-~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~- 312 (393)
T d1sq9a_ 235 RSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK- 312 (393)
T ss_dssp EEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE-
T ss_pred EEcccccccc-eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCE-
Confidence 9999999999 888999887 4999999999877766421 235566788899999999999999999
Q ss_pred cccccccccccccccchhhhhhhhhcCCCccccc----cCCCCCCcccccc-cccc
Q psy4571 321 SVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSD----RHSSDNDTEDLNS-IWSM 371 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~----~~~~~~~~~~~~~-~w~~ 371 (437)
|++||+.+|+++.++.||.+.+.. +.+++++..++.. +|.+
T Consensus 313 ----------v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T d1sq9a_ 313 ----------LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV 358 (393)
T ss_dssp ----------EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE
T ss_pred ----------EEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceE
Confidence 899999999999999999988874 6788888776643 5554
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.3e-27 Score=213.91 Aligned_cols=262 Identities=14% Similarity=0.161 Sum_probs=195.6
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeec------CCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccC
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK------NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFP 103 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~ 103 (437)
++=+.-.|.+++|+ | |+||+.|++|++|+. |+..+..+.+.+....++++.|+++++|+....+ +.
T Consensus 9 l~gH~~~I~~l~~s-~----l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~~---~~ 80 (287)
T d1pgua2 9 ISGHNKGITALTVN-P----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE---FG 80 (287)
T ss_dssp ECCCSSCEEEEETT-T----TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE---CS
T ss_pred ECCCCCceEEEEEC-c----EEEEeCCCeEEEEECCCCCCCCCCCEEEEEecCCCeEEEEeeccccccccccccc---cc
Confidence 34456689999998 5 899999999999994 4566888888877777789999999999976532 34
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~ 182 (437)
..+.++++++ ++..+ ..+.++.+.+|+.. ....+..+..+ ..+ .++++++.. +++++.| +.+++|++...
T Consensus 81 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~--~~~~~~~~~-~~v~~~~~~~v~~~~~~~~ 151 (287)
T d1pgua2 81 SQPKVASANN-DGFTA-VLTNDDDLLILQSF---TGDIIKSVRLN-SPG--SAVSLSQNY-VAVGLEEGNTIQVFKLSDL 151 (287)
T ss_dssp SCEEEEEECS-SSEEE-EEETTSEEEEEETT---TCCEEEEEECS-SCE--EEEEECSSE-EEEEETTTSCEEEEETTEE
T ss_pred cceeeeeecc-CCceE-EEeecccceeeecc---ceeeeeecccc-cee--eeeeccCcc-eeeeccccceeeeeecccc
Confidence 5677888888 45444 45567778899987 44555555433 334 456777775 6666665 57999999875
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+........|..++++++|+|++. +|++|+.||.|++||+.+..... ..+.+|...|.+++|+|.+
T Consensus 152 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~-------------~~~~~h~~~v~~~~~~p~~ 217 (287)
T d1pgua2 152 EVSFDLKTPLRAKPSYISISPSET-YIAAGDVMGKILLYDLQSREVKT-------------SRWAFRTSKINAISWKPAE 217 (287)
T ss_dssp EEEEECSSCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEE-------------CCSCCCSSCEEEEEECCCC
T ss_pred ceeeeeeeccCCceeEEEeccCcc-ccccccccccccceeeccccccc-------------ccccccccccceeeecccc
Confidence 543333445788999999999998 58999999999999998754221 2256899999999999854
Q ss_pred ---------CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccccc
Q psy4571 263 ---------PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVL 333 (437)
Q Consensus 263 ---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~ 333 (437)
..++++|+.|+.|++||++++... +.....|...+..++|+|++. +++++.|+. |++
T Consensus 218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~--~~~~~~h~~~V~~v~~~~~~~-l~s~g~D~~-----------v~i 283 (287)
T d1pgua2 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI--IKALNAHKDGVNNLLWETPST-LVSSGADAC-----------IKR 283 (287)
T ss_dssp ------CCSCCEEEEEETTSCEEEEESSCTTCC--EEETTSSTTCEEEEEEEETTE-EEEEETTSC-----------EEE
T ss_pred cccccccCCCCeeEeecCCCeEEEEECCCCCeE--EEEeCCCCCCeEEEEECCCCE-EEEEECCCe-----------EEE
Confidence 237899999999999999874432 222233566778889999875 777888998 788
Q ss_pred ccc
Q psy4571 334 FDI 336 (437)
Q Consensus 334 wd~ 336 (437)
||+
T Consensus 284 W~i 286 (287)
T d1pgua2 284 WNV 286 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.2e-27 Score=214.45 Aligned_cols=285 Identities=16% Similarity=0.214 Sum_probs=209.5
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCC-----------ceeEEEecCCCCeEEEecCceEEEEEeeeccccc---
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTP-----------FLYDLVVNNYVANISCILNISILFFEIIFTQNFP--- 101 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~-----------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~--- 101 (437)
.|.+ |++ +++++|+|||.|++|++|+..++ .+..+.+.+. ..++++.|+.+++|+........
T Consensus 18 ~V~s-~~~-~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~-~l~s~s~D~~~~~~~~~~~~~~~~~~ 94 (342)
T d2ovrb2 18 HVIT-CLQ-FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETGECIHTLY 94 (342)
T ss_dssp SCEE-EEE-EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceEE-EEE-ECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC-ccccceecccccccccccccceeccc
Confidence 3433 455 56899999999999999996544 4555566543 34577889999999965433222
Q ss_pred -cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 102 -FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 102 -~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
....+..... ....++.+..|+.+.+|+.. ..+....+..+..... ...+... .+++++.|+.|++||.+
T Consensus 95 ~~~~~~~~~~~---~~~~~~~~~~d~~i~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~d~~i~~~d~~ 165 (342)
T d2ovrb2 95 GHTSTVRCMHL---HEKRVVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVR--CVQYDGR-RVVSGAYDFMVKVWDPE 165 (342)
T ss_dssp CCSSCEEEEEE---ETTEEEEEETTSEEEEEESS---SCCEEEEEECCSSCEE--EEEECSS-CEEEEETTSCEEEEEGG
T ss_pred ccceeEeeeec---ccccccccccceeEEEeecc---cccceeeeecccccce--eeccccc-eeeeecCCCeEEEeecc
Confidence 2223333333 34677889999999999998 4444445444443333 3344455 48999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
.... +..+.+|...+..+.+ ++. .+++|+.||.|++||++..+ .+....+|...+.++++++
T Consensus 166 ~~~~-~~~~~~~~~~~~~~~~--~~~-~l~s~~~dg~i~~~d~~~~~--------------~~~~~~~~~~~v~~~~~~~ 227 (342)
T d2ovrb2 166 TETC-LHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGN--------------CIHTLTGHQSLTSGMELKD 227 (342)
T ss_dssp GTEE-EEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCC--------------EEEEECCCCSCEEEEEEET
T ss_pred ccee-eEEEcCcccccccccC--CCC-EEEEEeCCCeEEEeecccce--------------eeeEecccccceeEEecCC
Confidence 8554 7788888887766655 555 58999999999999998753 4566889999999988865
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+ ++++++.|+.|++||+...+....+.....+ .....++++++.++++|+.|+. |++||+.+|+
T Consensus 228 --~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~s~Dg~-----------i~iwd~~tg~ 291 (342)
T d2ovrb2 228 --N-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH--QSAVTCLQFNKNFVITSSDDGT-----------VKLWDLKTGE 291 (342)
T ss_dssp --T-EEEEEETTSCEEEEETTTCCEEEEECSTTSC--SSCEEEEEECSSEEEEEETTSE-----------EEEEETTTCC
T ss_pred --C-EEEEEcCCCEEEEEeccccccccccccccee--eeceeecccCCCeeEEEcCCCE-----------EEEEECCCCC
Confidence 4 7899999999999999988776665543222 2333355667789999999998 8999999999
Q ss_pred hhhhh-----cCCCccccccCCCCCCccccc
Q psy4571 341 EQRQL-----LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 341 ~~~~~-----~~h~~~~~~~~~~~~~~~~~~ 366 (437)
.++.+ .+|...+..+.++|++..++.
T Consensus 292 ~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~ 322 (342)
T d2ovrb2 292 FIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322 (342)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred EEEEEecccCCCCCCCEEEEEECCCCCEEEE
Confidence 88776 467788999999999877665
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.3e-26 Score=212.24 Aligned_cols=286 Identities=12% Similarity=0.017 Sum_probs=200.4
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
.+-+.-.|.+++|+ |++++|++||.|++||+|+...+...... .....+..+|.++
T Consensus 7 ~~~h~d~I~~l~fs-p~~~~L~s~s~Dg~v~iwd~~~~~~~~~~-----------------------~~~~~h~~~V~~v 62 (342)
T d1yfqa_ 7 EQAPKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDL-----------------------LQSLRYKHPLLCC 62 (342)
T ss_dssp SSCCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEE-----------------------EEEEECSSCEEEE
T ss_pred CCCCCCCEEEEEEe-CCCCEEEEEECCCeEEEEEccCCCcceEE-----------------------EEecCCCCCEEEE
Confidence 34455679999999 99999999999999999997654322111 0112355789999
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee--
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-- 186 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~-- 186 (437)
+|+|.++.+|++|+.||.|++|++.. .........+.. ......+.+++. .+++++.|+++++||++......
T Consensus 63 ~f~~~~~~~l~sg~~d~~v~~w~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~wd~~~~~~~~~~ 138 (342)
T d1yfqa_ 63 NFIDNTDLQIYVGTVQGEILKVDLIG---SPSFQALTNNEANLGICRICKYGDD-KLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp EEEESSSEEEEEEETTSCEEEECSSS---SSSEEECBSCCCCSCEEEEEEETTT-EEEEEETTSEEEEECHHHHTTBCEE
T ss_pred EEeCCCCCEEEEcccccceeeeeccc---ccccccccccccccccccccccccc-cccccccccccceeeccccccceee
Confidence 99997677999999999999999984 344444444443 344455555566 59999999999999987533211
Q ss_pred -eEeccC--CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 187 -HSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 187 -~~~~~h--~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.....+ ........+.+.+. .+++++.|+.|++||++....... ......+...+.+..+.|...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 206 (342)
T d1yfqa_ 139 VKNLNSNNTKVKNKIFTMDTNSS-RLIVGMNNSQVQWFRLPLCEDDNG-----------TIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp EEESCSSSSSSCCCEEEEEECSS-EEEEEESTTEEEEEESSCCTTCCC-----------EEEECSCSSCEEEEEECSGGG
T ss_pred ecccccccccceeeeeeeeccCC-ceeeecCCCcEEEEecccCcccce-----------eeeecccccceeeeEeecCCC
Confidence 122222 23345666777777 588999999999999987654332 223344555667777766555
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCcee------eee------eecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKT------MRL------DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~------~~~------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
..+++++.||.+.+|+......... ... ...+...+..++|+|++.+|++|+.|+. |
T Consensus 207 ~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~-----------v 275 (342)
T d1yfqa_ 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-----------I 275 (342)
T ss_dssp CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----------E
T ss_pred CEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCE-----------E
Confidence 5889999999999999876533221 110 0112223456799999999999999999 8
Q ss_pred ccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 332 VLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 332 ~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++||+.+++.+..+..+. ....+.+++++..++..
T Consensus 276 ~vWD~~~~~~l~~~~~~~-~~~~~~~s~~~~~l~~a 310 (342)
T d1yfqa_ 276 SCWNLQTRKKIKNFAKFN-EDSVVKIACSDNILCLA 310 (342)
T ss_dssp EEEETTTTEEEEECCCCS-SSEEEEEEECSSEEEEE
T ss_pred EEEECCCCcEEEEecCCC-CCEEEEEEeCCCEEEEE
Confidence 999999999888886543 34556778888766554
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.6e-25 Score=205.31 Aligned_cols=283 Identities=18% Similarity=0.202 Sum_probs=206.2
Q ss_pred cceeEEecCCcc------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEe----------cCCCCeEEE
Q psy4571 20 NAFFTWSALPLS------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVV----------NNYVANISC 83 (437)
Q Consensus 20 ~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~----------~~~~~~i~~ 83 (437)
..+.+|.....+ -+...|.+++|+ + +++++|+.|+++++|+........... ........+
T Consensus 37 g~i~vWd~~~~~~~~~~~~h~~~V~~v~~~-~--~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (342)
T d2ovrb2 37 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-D--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113 (342)
T ss_dssp SCEEEEETTTCCEEEECCCCSSCEEEEEEE-T--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCCCEEEEEeC-C--CccccceecccccccccccccceecccccceeEeeeeccccccccc
Confidence 445666554322 245678999998 5 599999999999999966544332222 122233356
Q ss_pred ecCceEEEEEeeeccccc--cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 84 ILNISILFFEIIFTQNFP--FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
..++.+.+|+....+... ...........+ ....+++++.|+.|++||.. ....+..+.+|...+..+.+ ++
T Consensus 114 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~--~~ 187 (342)
T d2ovrb2 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DG 187 (342)
T ss_dssp ETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CS
T ss_pred ccceeEEEeecccccceeeeecccccceeecc-ccceeeeecCCCeEEEeecc---cceeeEEEcCcccccccccC--CC
Confidence 678899999976554322 112222333444 46788899999999999998 56677888888877766655 56
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
. .+++|+.||.|++||++..+. +..+..|...+.++++++ + +|++|+.|+.|++||+...+....
T Consensus 188 ~-~l~s~~~dg~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~--~-~l~s~s~d~~i~iwd~~~~~~~~~---------- 252 (342)
T d2ovrb2 188 I-HVVSGSLDTSIRVWDVETGNC-IHTLTGHQSLTSGMELKD--N-ILVSGNADSTVKIWDIKTGQCLQT---------- 252 (342)
T ss_dssp S-EEEEEETTSCEEEEETTTCCE-EEEECCCCSCEEEEEEET--T-EEEEEETTSCEEEEETTTCCEEEE----------
T ss_pred C-EEEEEeCCCeEEEeeccccee-eeEecccccceeEEecCC--C-EEEEEcCCCEEEEEeccccccccc----------
Confidence 6 499999999999999998665 788889999999988875 3 589999999999999987643322
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee--cccCCceeeeecCCCCcccccCCCCc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS--IRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+.....|...+.++.+++ + ++++|+.||.|++||+++++.++.+.... .+...+..++|+|++.++++|+.||+
T Consensus 253 -~~~~~~~~~~~~~~~~~~--~-~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt 328 (342)
T d2ovrb2 253 -LQGPNKHQSAVTCLQFNK--N-FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328 (342)
T ss_dssp -ECSTTSCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred -ccccceeeeceeecccCC--C-eeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCC
Confidence 122345677888888765 3 78899999999999999999888776422 23334667799999999999999986
Q ss_pred ccccccccccccccccch
Q psy4571 320 NSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~ 337 (437)
.... +++||+.
T Consensus 329 ~~~~-------l~~~Df~ 339 (342)
T d2ovrb2 329 EETK-------LLVLDFD 339 (342)
T ss_dssp SCCE-------EEEEECC
T ss_pred CeeE-------EEEEeCC
Confidence 3322 6788864
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=3.7e-26 Score=210.76 Aligned_cols=257 Identities=15% Similarity=0.187 Sum_probs=190.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCcee-------------EEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY-------------DLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~-------------~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
+...|.+++|+ | +..|++|+.|+++++|+....... ...+.+....+ .+..|+.|++||+....
T Consensus 52 H~~~V~~l~~s-~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~ 129 (355)
T d1nexb2 52 HDGGVWALKYA-H-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 129 (355)
T ss_dssp CSSCEEEEEEE-T-TTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC--
T ss_pred CCCCEEEEEEc-C-CCEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCc
Confidence 45679999998 6 468999999999999996544322 22233333433 66789999999975433
Q ss_pred cccc-------------------------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE
Q psy4571 99 NFPF-------------------------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 99 ~~~~-------------------------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~ 153 (437)
.... ........+.+ ++.+++++..|+.|++||+. ..+.+....++...+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~ 205 (355)
T d1nexb2 130 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVA---QMKCLYILSGHTDRIY 205 (355)
T ss_dssp ---------CCCEEESCTTTCTTEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEE
T ss_pred eeccccccceeccceeccccccceeeeeeecccccccccc-ccceeeeecccceeeeeecc---cccceeeeeccccccc
Confidence 2110 00112233444 57899999999999999998 5567778888899999
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 233 (437)
++.|+|++.. +++++.|+.|++||++++.. +..+.+|...|.++++++ + .|++|+.||.|++||+++...
T Consensus 206 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~-~~~~~~h~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~~----- 275 (355)
T d1nexb2 206 STIYDHERKR-CISASMDTTIRIWDLENGEL-MYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSR----- 275 (355)
T ss_dssp EEEEETTTTE-EEEEETTSCEEEEETTTCCE-EEEECCCSSCCCEEEECS--S-EEEEECTTSEEEEEETTTCCE-----
T ss_pred ccccccccee-eecccccceEEeeecccccc-cccccccccccccccccc--c-eeeeeecccccccccccccce-----
Confidence 9999999995 99999999999999999665 788899999999999975 3 589999999999999987532
Q ss_pred CCCCCCCceEEEecCccccEEEEE-EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFS-WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~-~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
.+..|...+.++. +++++. ++++| .|+.|++||+++++++..... .+...+..++|+|+ .+++
T Consensus 276 -----------~~~~~~~~~~~~~~~~~~~~-~l~~g-~d~~i~vwd~~tg~~~~~~~~--~~~~~V~~v~~~~~-~~~~ 339 (355)
T d1nexb2 276 -----------KFSYHHTNLSAITTFYVSDN-ILVSG-SENQFNIYNLRSGKLVHANIL--KDADQIWSVNFKGK-TLVA 339 (355)
T ss_dssp -----------EEEEECTTCCCCCEEEECSS-EEEEE-ETTEEEEEETTTCCBCCSCTT--TTCSEEEEEEEETT-EEEE
T ss_pred -----------ecccccCCceEEEEEcCCCC-EEEEE-eCCEEEEEECCCCCEEEEEec--CCCCCEEEEEEcCC-eEEE
Confidence 2345556666654 456666 66555 589999999999987754321 24456677899987 5788
Q ss_pred ccCCCCccc
Q psy4571 313 SESPTPTNS 321 (437)
Q Consensus 313 s~s~d~~~~ 321 (437)
+++.||.+.
T Consensus 340 ~~s~dg~~~ 348 (355)
T d1nexb2 340 AVEKDGQSF 348 (355)
T ss_dssp EEESSSCEE
T ss_pred EEECCCcEE
Confidence 888898743
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6.5e-24 Score=190.03 Aligned_cols=262 Identities=17% Similarity=0.267 Sum_probs=192.7
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEecCceEEEEEeeecccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF 100 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~ 100 (437)
...-+|+|+.| ++++|+||+.|++||+|+.++ +.+..+.+.+ ...++++.|+.|++|+.......
T Consensus 13 ~~~~~V~c~~~---d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~-~~l~s~s~D~~i~~~~~~~~~~~ 88 (293)
T d1p22a2 13 ETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE-RVIITGSSDSTVRVWDVNTGEML 88 (293)
T ss_dssp SSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS-SEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCCEEEEEE---cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeeccc-ceeeccccccccccccccccccc
Confidence 44566777654 588999999999999999654 4455555432 22347788999999997765433
Q ss_pred c--cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 101 P--FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~--~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
. .........+.+ ....++++..++.+++|+............+..|...+.++.+.+. .+++++.|+.|++||
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~d~~i~~~d 164 (293)
T d1p22a2 89 NTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWN 164 (293)
T ss_dssp EEECCCCSCEEEEEC-CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEE
T ss_pred ccccccccccccccc-cccceeecccccceeEeeccccccccccccccccccccccceeccc---ccccccCCCceeeec
Confidence 2 222333444555 4678889999999999999865544556667788999998888753 488999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+++.+. +..+.++...+..+.+++ . .+++++.||.|++||+++.. .+....+|...+..+
T Consensus 165 ~~~~~~-~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~v~~~-- 224 (293)
T d1p22a2 165 TSTCEF-VRTLNGHKRGIACLQYRD--R-LVVSGSSDNTIRLWDIECGA--------------CLRVLEGHEELVRCI-- 224 (293)
T ss_dssp TTTCCE-EEEEECCSSCEEEEEEET--T-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEE--
T ss_pred CCCCcE-EEEEcccccccccccCCC--C-eEEEecCCCEEEEEecccce--------------eeeeecccceeeeec--
Confidence 998665 778888999998888864 3 58999999999999998753 345577888887754
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCc------eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
++++. .+++|+.||.|++||+...... ..+.....|...+..++| ++.+|++++.|++ |+
T Consensus 225 ~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~-----------i~ 290 (293)
T d1p22a2 225 RFDNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT-----------IL 290 (293)
T ss_dssp ECCSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSE-----------EE
T ss_pred cccce-EEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCE-----------EE
Confidence 45666 7889999999999998653321 112222224445555555 6789999999999 77
Q ss_pred ccc
Q psy4571 333 LFD 335 (437)
Q Consensus 333 ~wd 335 (437)
+||
T Consensus 291 iWD 293 (293)
T d1p22a2 291 IWD 293 (293)
T ss_dssp EEC
T ss_pred EeC
Confidence 776
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1e-24 Score=196.29 Aligned_cols=225 Identities=13% Similarity=0.206 Sum_probs=171.4
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCC----CceeEEEecCCCCeEEEecCceEEEEEeeeccccc-cCCCcce
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----PFLYDLVVNNYVANISCILNISILFFEIIFTQNFP-FPLSRQD 108 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-~~~~v~~ 108 (437)
.-.|.++++. +. ..+++++.|+++++|+... .....+.+.+....+....++.+.+|+........ .......
T Consensus 46 ~~~V~~~~~~-~~-~~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (287)
T d1pgua2 46 SNLIVSLDNS-KA-QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 123 (287)
T ss_dssp CSCEEEEECC-ST-TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred CCCEEEEEec-CC-CeEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecccccee
Confidence 3457888877 54 5689999999999999542 34555666666666777788888888865443222 2233345
Q ss_pred EEeeCCCCCEEEEEECCC-cEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 109 VAWHLLHESLFGSVADDQ-KLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.+++| ++..+++++.++ .+++|++.. ...... ...|.+.+++++|+|++.+ |++|+.||.|++||+.++....
T Consensus 124 ~~~~~-~~~~~~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~g~~dg~i~i~d~~~~~~~~ 198 (287)
T d1pgua2 124 SAVSL-SQNYVAVGLEEGNTIQVFKLSD---LEVSFDLKTPLRAKPSYISISPSETY-IAAGDVMGKILLYDLQSREVKT 198 (287)
T ss_dssp EEEEE-CSSEEEEEETTTSCEEEEETTE---EEEEEECSSCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE
T ss_pred eeeec-cCcceeeeccccceeeeeeccc---cceeeeeeeccCCceeEEEeccCccc-cccccccccccceeeccccccc
Confidence 66777 456777777665 799999873 232223 2357789999999999995 9999999999999999876645
Q ss_pred eEeccCCCceEEEEEcCCC---------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 187 HSFESHKDEIFQVQWSPHN---------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~~---------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
..+..|..+|.+++|+|.+ ..++++|+.|++|++||++... +.+..+.+|...|++++
T Consensus 199 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~-------------~~~~~~~~h~~~V~~v~ 265 (287)
T d1pgua2 199 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-------------KIIKALNAHKDGVNNLL 265 (287)
T ss_dssp CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-------------CCEEETTSSTTCEEEEE
T ss_pred ccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCC-------------eEEEEeCCCCCCeEEEE
Confidence 5677899999999999854 2368999999999999997642 33556789999999999
Q ss_pred EccCCCeEEEEEeCCCeEEEEeC
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+|++. +++++.|+.|++|++
T Consensus 266 ~~~~~~--l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 266 WETPST--LVSSGADACIKRWNV 286 (287)
T ss_dssp EEETTE--EEEEETTSCEEEEEE
T ss_pred ECCCCE--EEEEECCCeEEEEEE
Confidence 999874 779999999999986
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=1e-24 Score=202.17 Aligned_cols=285 Identities=9% Similarity=-0.008 Sum_probs=205.0
Q ss_pred EEEEeeCC-CcceEEEeeccCceEeeec---------CCCceeEEEecCCCCeEE-EecC--ceEEEEEeeeccc---cc
Q psy4571 38 YRLCVAEP-FDDAVEERVINEEYKIWKK---------NTPFLYDLVVNNYVANIS-CILN--ISILFFEIIFTQN---FP 101 (437)
Q Consensus 38 ~~~~~~~~-~~~~l~tgs~d~~v~iw~~---------~~~~~~~~~~~~~~~~i~-~~~~--~~i~~~~~~~~~~---~~ 101 (437)
+.-.|+ | +++++++++ ++.+.+|+. |.+.+..+.|++++..+. ++.+ ..|++||...++. ..
T Consensus 6 ~~~~fS-P~dG~~~a~~~-~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~ 83 (360)
T d1k32a3 6 FAEDFS-PLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEE 83 (360)
T ss_dssp GEEEEE-ECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred hccccc-CCCCCEEEEEE-CCeEEEEECCCCcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeC
Confidence 446799 6 999999987 568999994 456688899999988774 3333 2699999765443 34
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEE----------eCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG----------SAD 171 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sg----------s~d 171 (437)
+...+.+++|+| ++++|++++.++.+++|++. ..+....+..|...+.+++|+|+|++ |+.+ ..+
T Consensus 84 ~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~-la~~~~~~~~~~~~~~~ 158 (360)
T d1k32a3 84 NLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLE---TGKPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVM 158 (360)
T ss_dssp CCCSEEEEEECT-TSSEEEEEETTSEEEEEETT---TCCEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCE
T ss_pred CCceEEeeeecc-cccccceecccccccccccc---ccceeeeeecccccccchhhccceee-eeeeccccccceeeccc
Confidence 577899999999 68899999999999999998 55667777888999999999999996 6543 345
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC-------C---------
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED-------A--------- 235 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------~--------- 235 (437)
+.+++||+.+++ ...+..+...+..++|+|+|++ |++++.|+.+++||............ .
T Consensus 159 ~~~~v~d~~~~~--~~~~~~~~~~~~~~~~spdg~~-l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T d1k32a3 159 QAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKN-LYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235 (360)
T ss_dssp EEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCE-EEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred cceeeeccccCc--eeeecccccccccccccCCCCE-EEEEeCCCceEcccccccceeeccccceEEEecccCccccceE
Confidence 679999999854 4455567788999999999995 88999999999998755432110000 0
Q ss_pred -------------CCCCCceEE----------EecCccccEEEEEEccCCC--eEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 236 -------------EDGPPELLF----------IHGGHTAKISDFSWNPNEP--WVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 236 -------------~~~~~~~~~----------~~~~h~~~v~~l~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.......+. .+..+.+.+..+.+.+.+. .++++++.++.+++||+.+++.. .+
T Consensus 236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~- 313 (360)
T d1k32a3 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-EV- 313 (360)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-EE-
T ss_pred CCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE-Ee-
Confidence 000000011 1222233334444444333 24567778999999999987532 11
Q ss_pred eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc
Q psy4571 291 LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
...+..++|||||+.|++++.|+. |++||+..++...++.-+..
T Consensus 314 -----~~~v~~~~~SpDG~~l~~~~~Dg~-----------i~v~d~~~~~~~~~~~~d~~ 357 (360)
T d1k32a3 314 -----KNNLTDLRLSADRKTVMVRKDDGK-----------IYTFPLEKPEDERTVETDKR 357 (360)
T ss_dssp -----EEEEEEEEECTTSCEEEEEETTSC-----------EEEEESSCTTSCEECCCCSS
T ss_pred -----cCCcCEEEECCCCCEEEEEECCCe-----------EEEEECCCCCcceEEEeccc
Confidence 123556799999999999999999 89999999988777655543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.5e-23 Score=186.16 Aligned_cols=212 Identities=17% Similarity=0.296 Sum_probs=157.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|+|++| ++++|++|+.||+|+|||+. ..+.+..+.+|.+.|.+++|+ +. +|++|+.|+.|++|++..
T Consensus 14 ~~~~V~c~~~---d~~~l~sgs~Dg~i~vWd~~---~~~~~~~l~~H~~~V~~v~~~--~~-~l~s~s~D~~i~~~~~~~ 84 (293)
T d1p22a2 14 TSKGVYCLQY---DDQKIVSGLRDNTIKIWDKN---TLECKRILTGHTGSVLCLQYD--ER-VIITGSSDSTVRVWDVNT 84 (293)
T ss_dssp SCCCEEEEEC---CSSEEEEEESSSCEEEEESS---SCCEEEEECCCSSCEEEEECC--SS-EEEEEETTSCEEEEESSS
T ss_pred CCCCEEEEEE---cCCEEEEEeCCCeEEEEECC---CCcEEEEEecCCCCEeeeecc--cc-eeeccccccccccccccc
Confidence 3456776654 46788899999999999987 567788888888888888774 55 488889999999998865
Q ss_pred Cce------------------------------------------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 182 LKL------------------------------------------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 182 ~~~------------------------------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
+.. ....+..|...+..+.+.+. .+++++.|+.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~d~~i~ 161 (293)
T d1p22a2 85 GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIK 161 (293)
T ss_dssp CCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT---EEEEEETTSEEE
T ss_pred ccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceeccc---ccccccCCCcee
Confidence 431 01223345666666666543 467888999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCc
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG 299 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (437)
+||+++.+ .+..+.+|...+..+.+++ . .+++++.||.|++||+++.+.+..... ...
T Consensus 162 ~~d~~~~~--------------~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~ 219 (293)
T d1p22a2 162 VWNTSTCE--------------FVRTLNGHKRGIACLQYRD--R-LVVSGSSDNTIRLWDIECGACLRVLEG-----HEE 219 (293)
T ss_dssp EEETTTCC--------------EEEEEECCSSCEEEEEEET--T-EEEEEETTSCEEEEETTTCCEEEEECC-----CSS
T ss_pred eecCCCCc--------------EEEEEcccccccccccCCC--C-eEEEecCCCEEEEEecccceeeeeecc-----cce
Confidence 99998753 3455778888888888764 4 688999999999999999877665542 222
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhhh---------hhhhcCCCccccccCCC
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE---------QRQLLGTEEESSDRHSS 358 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~---------~~~~~~h~~~~~~~~~~ 358 (437)
....+++++.++++|+.|+. +++||+.++.. +..+.+|.+.+.++.++
T Consensus 220 ~v~~~~~~~~~l~sg~~dg~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d 276 (293)
T d1p22a2 220 LVRCIRFDNKRIVSGAYDGK-----------IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276 (293)
T ss_dssp CEEEEECCSSEEEEEETTSC-----------EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC
T ss_pred eeeeccccceEEEEEcCCCE-----------EEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc
Confidence 33467889999999999999 78888766543 45568899988888774
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.6e-24 Score=196.72 Aligned_cols=259 Identities=10% Similarity=-0.023 Sum_probs=174.6
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.+...|++|+|+| ++++||+|+.||+|+|||++.......+....+|.++|.+++|+|++..+|++|+.||.|++|++.
T Consensus 9 ~h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~ 87 (342)
T d1yfqa_ 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecc
Confidence 4667899999999 688999999999999999985433233444457999999999999877679999999999999999
Q ss_pred CCceeeeEeccC-CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc--cccEEEEE
Q psy4571 181 NLKLKLHSFESH-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH--TAKISDFS 257 (437)
Q Consensus 181 ~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~ 257 (437)
.... ......+ ........+.+++. .+++++.|+.+++||++....... .......+ ......+.
T Consensus 88 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~wd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 155 (342)
T d1yfqa_ 88 GSPS-FQALTNNEANLGICRICKYGDD-KLIAASWDGLIEVIDPRNYGDGVI----------AVKNLNSNNTKVKNKIFT 155 (342)
T ss_dssp SSSS-EEECBSCCCCSCEEEEEEETTT-EEEEEETTSEEEEECHHHHTTBCE----------EEEESCSSSSSSCCCEEE
T ss_pred cccc-cccccccccccccccccccccc-cccccccccccceeecccccccee----------eecccccccccceeeeee
Confidence 8665 3333333 33444555555555 689999999999999976543322 11112222 22344566
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee-eecCCCCcccccCCCCccccccccccccc----c
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS-TASPTASSTASESPTPTNSVHEKNYWQGL----V 332 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~s~s~d~~~~~~~~~~~~~i----~ 332 (437)
+.+.+. .+++++.|+.|++||+...+.................. .+++++..+++++.++.+.++..+..... .
T Consensus 156 ~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~ 234 (342)
T d1yfqa_ 156 MDTNSS-RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp EEECSS-EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT
T ss_pred eeccCC-ceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccc
Confidence 677777 78899999999999999887766555443333334433 44567788999999998655533211110 0
Q ss_pred cccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
.+.....+......+|...+.++.++|++..++++ +|++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~ 282 (342)
T d1yfqa_ 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred cceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCC
Confidence 01111111222335666677788889988876653 666643
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=2.1e-22 Score=186.34 Aligned_cols=276 Identities=10% Similarity=0.027 Sum_probs=194.5
Q ss_pred eEEEecC-CCCeEEEecCceEEEEEeeecc--ccccCCCcceEEeeCCCCCEEEEEECC-C-cEEEEEcCCCCCCCCeee
Q psy4571 70 YDLVVNN-YVANISCILNISILFFEIIFTQ--NFPFPLSRQDVAWHLLHESLFGSVADD-Q-KLMIWDTRSHNVSKPSHT 144 (437)
Q Consensus 70 ~~~~~~~-~~~~i~~~~~~~i~~~~~~~~~--~~~~~~~v~~~~~sp~~~~~l~~~~~d-g-~v~vwd~~~~~~~~~~~~ 144 (437)
+...|+| ++..++....+.|.+||...+. +..+...|.+++|+| +++.|++++.+ | .|++||.++ .....
T Consensus 6 ~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~sp-Dg~~l~~~~~~~g~~v~v~d~~~----~~~~~ 80 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGG-DTKVAFIHGTREGDFLGIYDYRT----GKAEK 80 (360)
T ss_dssp GEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECS-SSEEEEEEEETTEEEEEEEETTT----CCEEE
T ss_pred hcccccCCCCCEEEEEECCeEEEEECCCCcEEEccCCCCEEEEEECC-CCCEEEEEEcCCCCEEEEEECCC----CcEEE
Confidence 3456788 7888888889999999976543 345778999999999 56666655544 3 799999983 34556
Q ss_pred eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEE----------eC
Q psy4571 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS----------GT 214 (437)
Q Consensus 145 ~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg----------~~ 214 (437)
+..|...|.+++|+|++++ |++++.++.+++|++.+++. ...+..|...+.+++|+|+|++ |+.+ ..
T Consensus 81 ~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~-la~~~~~~~~~~~~~~ 157 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETGKP-TVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYV 157 (360)
T ss_dssp CCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTCCE-EEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCC
T ss_pred eeCCCceEEeeeecccccc-cceeccccccccccccccce-eeeeecccccccchhhccceee-eeeeccccccceeecc
Confidence 7789999999999999996 99999999999999998665 6677788899999999999996 5533 34
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce----eee
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK----TMR 290 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~ 290 (437)
++.+++||+.++.. .....|...+..++|+|+|+ .|++++.|+.+++||........ ...
T Consensus 158 ~~~~~v~d~~~~~~---------------~~~~~~~~~~~~~~~spdg~-~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~ 221 (360)
T d1k32a3 158 MQAIHVYDMEGRKI---------------FAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 221 (360)
T ss_dssp EEEEEEEETTTTEE---------------EECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSSSCEECCSCBEEE
T ss_pred ccceeeeccccCce---------------eeecccccccccccccCCCC-EEEEEeCCCceEcccccccceeeccccceE
Confidence 55699999987532 22445667889999999999 78899999999999976543211 111
Q ss_pred eeecccCCceeeeecCCCCcccccCCCCcc---ccc-----------------------------------ccccccccc
Q psy4571 291 LDSIRSNGGISSTASPTASSTASESPTPTN---SVH-----------------------------------EKNYWQGLV 332 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~---~~~-----------------------------------~~~~~~~i~ 332 (437)
....+........+++++..++++..+... +++ .......++
T Consensus 222 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 301 (360)
T d1k32a3 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL 301 (360)
T ss_dssp EEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEE
T ss_pred EEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEE
Confidence 111122333334566666555444322110 000 001122378
Q ss_pred cccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+||+.+++. ..|.+.+..+.++|||+.++.. +|++..
T Consensus 302 ~~d~~~~~~----~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~ 345 (360)
T d1k32a3 302 KYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345 (360)
T ss_dssp EEETTTCCE----EEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSC
T ss_pred EEECCCCeE----EEecCCcCEEEECCCCCEEEEEECCCeEEEEECCC
Confidence 888877653 3455568888999999887754 777643
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=1e-22 Score=194.07 Aligned_cols=296 Identities=6% Similarity=-0.041 Sum_probs=202.7
Q ss_pred cceEEEeeccCceEeeecCCC----------ceeEEEecCCCCeE-EEecCceEEEEEeeeccc-----ccc----CCCc
Q psy4571 47 DDAVEERVINEEYKIWKKNTP----------FLYDLVVNNYVANI-SCILNISILFFEIIFTQN-----FPF----PLSR 106 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~----------~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~-----~~~----~~~v 106 (437)
.-++++.+.|++|++||..++ .+..+.++|++..+ ++..|+.+++||+...+. ++. ...+
T Consensus 32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~ 111 (426)
T d1hzua2 32 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE 111 (426)
T ss_dssp GEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred eEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence 345688889999999996543 35778889999887 456789999999765542 121 2234
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-----------CCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-----------TAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-----------~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
.+++|+|++..+++++..++.+++||... .........| .+....+.+++++..++.+....+.+.
T Consensus 112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~ 188 (426)
T d1hzua2 112 SSKFKGYEDRYTIAGAYWPPQFAIMDGET---LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 188 (426)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTT---CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred EeeeecCCCCEEEEeecCCCeEEEEcCCc---cceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 46677785444456666899999999984 4444444433 344556667777776455555566677
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC---------------------
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--------------------- 234 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--------------------- 234 (437)
+++.............+...+..++|+|++++++++...+..+.+++..+.........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (426)
T d1hzua2 189 LVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW 268 (426)
T ss_dssp EEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEE
T ss_pred EEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceE
Confidence 77766544433344467788999999999998776767778899999887654321110
Q ss_pred -------------------CCCCCCceEEEecCccccEEEEEEccCCCeEEE------EEeCCCeEEEEeCCCCCCceee
Q psy4571 235 -------------------AEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC------SVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 235 -------------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~------s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
......+....+.+|...+..++|+|+++++.+ +++.|++|++||+.+++...++
T Consensus 269 ~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~ 348 (426)
T d1hzua2 269 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 348 (426)
T ss_dssp EEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred EeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEE
Confidence 001112456678889999999999999995443 3556899999999999877665
Q ss_pred eee------ecccCCceeeeecCCCCccc-c----cCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 290 RLD------SIRSNGGISSTASPTASSTA-S----ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 290 ~~~------~~~~~~~~~~~~s~~g~~l~-s----~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
... ..+...+..++|||||+.++ + ++.++. |++||..|+++...+.++. .++
T Consensus 349 ~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~-----------i~v~D~~T~k~~~~i~~~~------~~t 411 (426)
T d1hzua2 349 LPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSA-----------LVVVDDKTLKLKAVVKDPR------LIT 411 (426)
T ss_dssp ECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCE-----------EEEEETTTTEEEEEECCTT------CCS
T ss_pred eccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCe-----------EEEEECCCCeEEEEECCCC------ccC
Confidence 321 11234466778999999663 2 345565 8999999999888888875 345
Q ss_pred CCCc
Q psy4571 359 DNDT 362 (437)
Q Consensus 359 ~~~~ 362 (437)
|+|.
T Consensus 412 p~Gk 415 (426)
T d1hzua2 412 PTGK 415 (426)
T ss_dssp EEEE
T ss_pred CCce
Confidence 6665
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.88 E-value=3.1e-20 Score=167.12 Aligned_cols=261 Identities=12% Similarity=0.068 Sum_probs=193.4
Q ss_pred EEEeeccCceEeeecCCCc----------eeEEEecCCCCeE--EEecCceEEEEEeeeccc---cccCCCcceEEeeCC
Q psy4571 50 VEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI--SCILNISILFFEIIFTQN---FPFPLSRQDVAWHLL 114 (437)
Q Consensus 50 l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~ 114 (437)
+++++.|++|++||..++. +..+.+++++..+ +...++.|.+||+...+. ++....+..++|+++
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~ 84 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPD 84 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred EEEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccccc
Confidence 4567888999999966543 5567778887765 344678999999765443 344567789999996
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
+...++++..++.+.+|+.. ..+....+.. ...+.++.|+|++..+++++..++.+.+|+..+... ...+. +..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~ 158 (301)
T d1l0qa2 85 GKQVYVTNMASSTLSVIDTT---SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVS-VGR 158 (301)
T ss_dssp SSEEEEEETTTTEEEEEETT---TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CCS
T ss_pred cccccccccccceeeecccc---cceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccce-eeecc-cCC
Confidence 55667777788899999998 4455555544 456789999999998777888899999999998654 55554 445
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE--eCC
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV--SED 272 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~--~~d 272 (437)
.+..++++|++..+++++..++.+.+|+...... .... .....+..++|++++..+++++ ..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~ 223 (301)
T d1l0qa2 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--------------IDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYF 223 (301)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--------------EEEE-ECSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CceEEEeeccccceeeecccccccccccccceee--------------eecc-cccCCcceeecccccccccccccccee
Confidence 6789999999987555555567788888766422 2222 2335678899999999655544 345
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc-cccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST-ASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
+.|++||+.+++....+.. ...+..++|+|||+++ ++++.++. |++||+.+++.+.++.
T Consensus 224 ~~v~v~D~~t~~~~~~~~~----~~~~~~va~spdg~~l~va~~~~~~-----------i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 224 NTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFCNT-----------VSVIDTATNTITATMA 283 (301)
T ss_dssp CEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTE-----------EEEEETTTTEEEEEEE
T ss_pred eeeeeeecCCCeEEEEEcC----CCCEEEEEEeCCCCEEEEEECCCCe-----------EEEEECCCCeEEEEEe
Confidence 7899999999887766653 3456778999999976 57777887 8999999999887774
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.86 E-value=1.4e-20 Score=169.42 Aligned_cols=250 Identities=10% Similarity=0.095 Sum_probs=186.8
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
++...+++|.+||+...+ .++....+..++|+|++..++++++.++.|++||+. ..+.+..+..+. .+..++|
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~---t~~~~~~~~~~~-~~~~~~~ 81 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA---TNNVIATVPAGS-SPQGVAV 81 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT---TTEEEEEEECSS-SEEEEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECC---CCceeeeeeccc-ccccccc
Confidence 556688999999976544 445566788999999544345677789999999998 556677776665 4689999
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
++++.++++++..++.+.+|+..+++. ...+. +.....+++|+|+++.+++++..++.+.+|+..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~--------- 150 (301)
T d1l0qa2 82 SPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--------- 150 (301)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---------
T ss_pred ccccccccccccccceeeeccccccee-eeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccce---------
Confidence 999998778888899999999998654 55554 4566789999999998777888899999999988543
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+..... ...+..+.++|++..+++++..++.+.+|+....+....... ...+...++++++..++.+..+
T Consensus 151 -----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~v~~~~ 220 (301)
T d1l0qa2 151 -----INTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV----EAAPSGIAVNPEGTKAYVTNVD 220 (301)
T ss_dssp -----EEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----SSEEEEEEECTTSSEEEEEEEC
T ss_pred -----eeeccc-CCCceEEEeeccccceeeecccccccccccccceeeeecccc----cCCcceeecccccccccccccc
Confidence 222333 345788999999996666666678888888887655444432 3445667899999987655433
Q ss_pred CcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
.. ...+++||..+++.+..+..+. .+..++++|+|+.+
T Consensus 221 ~~--------~~~v~v~D~~t~~~~~~~~~~~-~~~~va~spdg~~l 258 (301)
T d1l0qa2 221 KY--------FNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKV 258 (301)
T ss_dssp SS--------CCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEE
T ss_pred ce--------eeeeeeeecCCCeEEEEEcCCC-CEEEEEEeCCCCEE
Confidence 21 0118999999999888776665 46788999999743
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.86 E-value=8.9e-21 Score=180.57 Aligned_cols=294 Identities=10% Similarity=0.011 Sum_probs=199.0
Q ss_pred ceEEEeeccCceEeeecCC----------CceeEEEecCCCCeE-EEecCceEEEEEeeeccc-----cccCC----Ccc
Q psy4571 48 DAVEERVINEEYKIWKKNT----------PFLYDLVVNNYVANI-SCILNISILFFEIIFTQN-----FPFPL----SRQ 107 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~----------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~-----~~~~~----~v~ 107 (437)
-++++.+.|++|++||..+ ..+..+.+++++..+ ++..|+.+++||+...+. ++... .+.
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~ 112 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET 112 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred EEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence 3458899999999999654 346788889999888 456789999999765432 22222 233
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-----------CCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-----------HTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-----------h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+.+|+|++..++++++.++.|++||..+ .+.+..+.. +......+.++|++..++++...++.|.+
T Consensus 113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 113 SKMEGWEDKYAIAGAYWPPQYVIMDGET---LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTT---CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred ecccCCCCCEEEEEcCCCCeEEEEeCcc---ccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence 4456774444567888999999999984 444444332 34567789999999987788888999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC---------------------
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA--------------------- 235 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~--------------------- 235 (437)
||..+.+........+...+..++|+|+|+++++++..++.+.++|.............
T Consensus 190 ~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 269 (432)
T d1qksa2 190 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 269 (432)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred EEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCcee
Confidence 99988654222222456778999999999986666667778999999875433221100
Q ss_pred ---CCCCCceEEE-------ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec
Q psy4571 236 ---EDGPPELLFI-------HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 236 ---~~~~~~~~~~-------~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s 305 (437)
.... ..+.. ...|...+....++|++. .+++++.++..++|+..+..... .....++ .
T Consensus 270 ~~~~lg~-~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~-~~~~~s~p~~~~lw~~~~~~~~~---------~~~~sv~-v 337 (432)
T d1qksa2 270 ATSHMGD-DSVALIGTDPEGHPDNAWKILDSFPALGGG-SLFIKTHPNSQYLYVDATLNPEA---------EISGSVA-V 337 (432)
T ss_dssp EEEBSSS-SEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCSEEEEECTTCSSH---------HHHTCEE-E
T ss_pred cccccCC-ceEEecccccccccccccEEEEEEEcCCCC-eEEEEecCCccceeecccCCCCC---------CeeeEEE-E
Confidence 0000 00000 112334566677777776 45577777777777665433211 1111223 3
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccccccc
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
||++.+++++.|+. +++||+.++. .+.+|...+..+.|+|||+.+..++|.
T Consensus 338 pDg~~la~~s~d~~-----------~k~w~~~~~~---~l~~~~~~v~~~~fS~DG~~v~~S~~~ 388 (432)
T d1qksa2 338 FDIKAMTGDGSDPE-----------FKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWN 388 (432)
T ss_dssp EEGGGCCCSSSCCC-----------EEEECHHHHH---TCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred EechhhcccccCCc-----------eEeccccccc---ccCCCCCcEEEeEECCCCCEEEEEEec
Confidence 89999999999988 8999987764 345666778889999999988888875
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=3.6e-21 Score=183.27 Aligned_cols=264 Identities=9% Similarity=0.069 Sum_probs=177.1
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC--CeeeeccCCCCeEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK--PSHTVDAHTAEVNCL 155 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~h~~~v~~l 155 (437)
++...+++|++||+...+ .++....+..++||| +++++++++.||+|++||+.+.+... .+....+|.+.+.++
T Consensus 36 V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~ 114 (426)
T d1hzua2 36 VTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSK 114 (426)
T ss_dssp EEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEee
Confidence 456678999999987654 344566899999999 68899999999999999998543211 112223555667778
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc-----------eEEEEEcCCCCcEEEEEeCCCeEEEEEcC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE-----------IFQVQWSPHNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~-----------v~~v~~~p~~~~~l~sg~~dg~i~vwd~~ 224 (437)
+|+|||+++++++..++.+++||..++.. ......|... ...+.+++++..++.+....+.+.+++..
T Consensus 115 ~~spDG~~l~v~~~~~~~v~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~ 193 (426)
T d1hzua2 115 FKGYEDRYTIAGAYWPPQFAIMDGETLEP-KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 193 (426)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCE-EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECS
T ss_pred eecCCCCEEEEeecCCCeEEEEcCCccce-eEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEec
Confidence 88899998667778999999999998664 5555444433 34455555555444444444555555544
Q ss_pred CCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee-------------
Q psy4571 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL------------- 291 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------- 291 (437)
.... ......++...+..+.|+|++++++++...+..+.+++..+++.......
T Consensus 194 ~~~~-------------~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (426)
T d1hzua2 194 DIDN-------------LTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV 260 (426)
T ss_dssp SSSS-------------CEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEE
T ss_pred cccc-------------eeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeee
Confidence 3321 12223456678899999999997777777788888888776543322210
Q ss_pred --------------------------------------eecccCCceeeeecCCCCccccc-------CCCCcccccccc
Q psy4571 292 --------------------------------------DSIRSNGGISSTASPTASSTASE-------SPTPTNSVHEKN 326 (437)
Q Consensus 292 --------------------------------------~~~~~~~~~~~~~s~~g~~l~s~-------s~d~~~~~~~~~ 326 (437)
...+...+..++++|||+++++. +.+++
T Consensus 261 ~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~t------- 333 (426)
T d1hzua2 261 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS------- 333 (426)
T ss_dssp ETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTC-------
T ss_pred cCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCE-------
Confidence 01123345667899999988843 22333
Q ss_pred cccccccccchhhhhhhhh---------cCCCccccccCCCCCCccccccccc
Q psy4571 327 YWQGLVLFDILVCEEQRQL---------LGTEEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~---------~~h~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
+++||+.+++...++ ..|...+..+.|+|||+.+..++|.
T Consensus 334 ----v~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~ 382 (426)
T d1hzua2 334 ----VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWN 382 (426)
T ss_dssp ----EEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECC
T ss_pred ----EEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEec
Confidence 899999998876544 2344456777899999877655554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.83 E-value=7.5e-19 Score=160.40 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=173.2
Q ss_pred ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCE-EEEEECCC
Q psy4571 48 DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESL-FGSVADDQ 126 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~-l~~~~~dg 126 (437)
+++++++.|++|++||..++.+......+. ....+.+++|+|+ +++ +++++.++
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~------------------------~~~~~~~i~~spD-g~~l~v~~~~~~ 56 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIAD------------------------AGPTPMVPMVAPG-GRIAYATVNKSE 56 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTT------------------------CTTCCCCEEECTT-SSEEEEEETTTT
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCC------------------------CCCCccEEEECCC-CCEEEEEECCCC
Confidence 578899999999999998877665432221 1234678999994 555 46777899
Q ss_pred cEEEEEcCCCCCCCCeeeeccCCC-----CeEEEEEeCCCCcEEEEEe------------CCCeEEEEeCCCCceeeeEe
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDAHTA-----EVNCLSFNPYSEYILATGS------------ADKTVALWDLRNLKLKLHSF 189 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~sgs------------~dg~i~lwd~~~~~~~~~~~ 189 (437)
.|.+||+. ..+.+..+..+.. .+..++|+|++.+ ++++. .+..+.+||..+... ...+
T Consensus 57 ~v~v~D~~---t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 131 (337)
T d1pbyb_ 57 SLVKIDLV---TGETLGRIDLSTPEERVKSLFGAALSPDGKT-LAIYESPVRLELTHFEVQPTRVALYDAETLSR-RKAF 131 (337)
T ss_dssp EEEEEETT---TCCEEEEEECCBTTEEEECTTCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEETTTTEE-EEEE
T ss_pred eEEEEECC---CCcEEEEEecCCCcccccceeeEEEcCCCcE-EEEeecCCcceeeeccccccceeeccccCCeE-EEec
Confidence 99999999 4566666554432 3457899999997 55554 467899999998654 5555
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC------------------CCC-------------
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA------------------EDG------------- 238 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~------------------~~~------------- 238 (437)
. +...+..++|+|+|++ +++++. .+.+||..+.+........ ...
T Consensus 132 ~-~~~~~~~~~~s~dg~~-l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (337)
T d1pbyb_ 132 E-APRQITMLAWARDGSK-LYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp E-CCSSCCCEEECTTSSC-EEEESS--SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred c-ccCCceEEEEcCCCCE-EEEEcC--CcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeee
Confidence 4 4566889999999996 666654 4778988765422211000 000
Q ss_pred ---------------------CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 239 ---------------------PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 239 ---------------------~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
..........+...+..+.++|++. .++.+ ++.+++||+.+++.+..+.. ..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~i~v~d~~~~~~~~~~~~----~~ 280 (337)
T d1pbyb_ 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKNASIKRVPL----PH 280 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTTEEEEEEEC----SS
T ss_pred ccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccce-EEEEc--cccEEEEECCCCcEEEEEcC----CC
Confidence 0001112233455667778888888 44443 58999999999988777653 45
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.+..++|+|||+++++++.++. |++||..+++.+.++.
T Consensus 281 ~~~~~~~s~dG~~l~v~~~~~~-----------i~v~D~~t~~~v~~i~ 318 (337)
T d1pbyb_ 281 SYYSVNVSTDGSTVWLGGALGD-----------LAAYDAETLEKKGQVD 318 (337)
T ss_dssp CCCEEEECTTSCEEEEESBSSE-----------EEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCc-----------EEEEECCCCcEEEEEE
Confidence 6778899999999999998888 8999999998887774
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.81 E-value=4.9e-20 Score=175.38 Aligned_cols=289 Identities=8% Similarity=-0.028 Sum_probs=182.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCc------------eeEEEe----cCCCCeE--EEecCceEEEEEeee
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF------------LYDLVV----NNYVANI--SCILNISILFFEIIF 96 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~------------~~~~~~----~~~~~~i--~~~~~~~i~~~~~~~ 96 (437)
..+..++|+ |+++++++++.|+++++|+..++. .....+ ++++..+ ++..++.+++||...
T Consensus 62 ~~~~~v~fS-pDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t 140 (432)
T d1qksa2 62 YAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 140 (432)
T ss_dssp SCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCeeEEEEC-CCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcc
Confidence 358889999 999999999999999999965433 223333 3456654 566789999999654
Q ss_pred cccc---------------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCC
Q psy4571 97 TQNF---------------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPY 160 (437)
Q Consensus 97 ~~~~---------------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~ 160 (437)
.+.. ........+.++|++..++++...++.|.+||..+. +...... .+...+.+++|+|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~---~~~~~~~i~~g~~~~~~~~spd 217 (432)
T d1qksa2 141 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL---NNLKTTEISAERFLHDGGLDGS 217 (432)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS---SEEEEEEEECCSSEEEEEECTT
T ss_pred ccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCC---CcceEEEEcccCccccceECCC
Confidence 3321 123345678899965556677778899999998743 3222221 44567899999999
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCceeeeEec-----cCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALWDLRNLKLKLHSFE-----SHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTED 234 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~ 234 (437)
|+++++++..++.+.++|.++.+. ..... .|........+.+.+. ..++.. .|+.|.+|+............
T Consensus 218 g~~~~va~~~~~~v~v~d~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~g~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~ 295 (432)
T d1qksa2 218 HRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVHPTFGP-VWATSHMGDDSVALIGTDPEGHPDNAWK 295 (432)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEE-EEEEECSSSSBCCTTCEEEEETTTEE-EEEEEBSSSSEEEEEECCTTTCTTTBTS
T ss_pred CCEEEEeccccceEEEeecccceE-EEEeccCccccccCcccceecCCCCc-eecccccCCceEEecccccccccccccE
Confidence 998666666677899999987554 33321 2334444455554444 344432 367788887765432211000
Q ss_pred ------C----------CCCCCceEE--EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc
Q psy4571 235 ------A----------EDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296 (437)
Q Consensus 235 ------~----------~~~~~~~~~--~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 296 (437)
. +.....+.. ....|.....++++ ||++ .+++++.|+.+++|++.++..+. .+.
T Consensus 296 v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~-~la~~s~d~~~k~w~~~~~~~l~------~~~ 367 (432)
T d1qksa2 296 ILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIK-AMTGDGSDPEFKTLPIAEWAGIT------EGQ 367 (432)
T ss_dssp EEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGG-GCCCSSSCCCEEEECHHHHHTCC------SSC
T ss_pred EEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-Eech-hhcccccCCceEecccccccccC------CCC
Confidence 0 000000000 01222222334554 8888 68899999999999986542221 133
Q ss_pred CCceeeeecCCCCccccc-----CCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 297 NGGISSTASPTASSTASE-----SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~-----s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
..+..++|||||+++... ..++. |.+||..|+++.+.+.+.
T Consensus 368 ~~v~~~~fS~DG~~v~~S~~~~~~~~g~-----------i~i~D~~T~k~~~~i~~~ 413 (432)
T d1qksa2 368 PRVVQGEFNKDGTEVWFSVWNGKDQESA-----------LVVVDDKTLELKHVIKDE 413 (432)
T ss_dssp CEEEEEEECTTSSEEEEEEECCTTSCCE-----------EEEEETTTTEEEEEECCT
T ss_pred CcEEEeEECCCCCEEEEEEecCCCCCCc-----------EEEEECCCceEEeEecCC
Confidence 456678999999977433 23455 788999888887777664
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.77 E-value=1.8e-17 Score=151.61 Aligned_cols=257 Identities=7% Similarity=-0.025 Sum_probs=173.8
Q ss_pred EeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEE
Q psy4571 41 CVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 41 ~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 120 (437)
+|. ++++++++++.|++|.+||..++.+....-.+. ...+.+++|+|++..+++
T Consensus 3 a~~-~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~-------------------------~~~p~~l~~spDG~~l~v 56 (346)
T d1jmxb_ 3 ALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-------------------------KFGPGTAMMAPDNRTAYV 56 (346)
T ss_dssp CCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSS-------------------------CCSSCEEEECTTSSEEEE
T ss_pred cCC-CCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCC-------------------------CCCcceEEECCCCCEEEE
Confidence 566 889999999999999999999988776543222 234679999995444456
Q ss_pred EEECCCcEEEEEcCCCCCCCCeeeeccCC------CCeEEEEEeCCCCcEEEEEe------------CCCeEEEEeCCCC
Q psy4571 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHT------AEVNCLSFNPYSEYILATGS------------ADKTVALWDLRNL 182 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~~~~~~~~~~~h~------~~v~~l~~~~~~~~~l~sgs------------~dg~i~lwd~~~~ 182 (437)
++..++.|.+||+.+ .+.+..+.... ..+..++|+|||++ +++++ .++.+.+||..++
T Consensus 57 ~~~~~~~v~~~d~~t---~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~-l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~ 132 (346)
T d1jmxb_ 57 LNNHYGDIYGIDLDT---CKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADG 132 (346)
T ss_dssp EETTTTEEEEEETTT---TEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EECCCCcEEEEeCcc---CeeeeeecccccccccCCceEEEEEecCCCE-EEEEecCCcceeeeeccCcceEEEEecccc
Confidence 777899999999984 44444443221 23567999999997 55443 4778999998875
Q ss_pred ceeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC---------CC--------------
Q psy4571 183 KLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA---------ED-------------- 237 (437)
Q Consensus 183 ~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~---------~~-------------- 237 (437)
+. ...+. .....+..+.+++++. ++++ ++.+.+|++.++......... ..
T Consensus 133 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (346)
T d1jmxb_ 133 LE-AKPVRTFPMPRQVYLMRAADDGS-LYVA---GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 207 (346)
T ss_dssp GG-BCCSEEEECCSSCCCEEECTTSC-EEEE---SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred ee-eeEEEeeeccCceEEEEecCCCE-EEEe---CCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCce
Confidence 54 22222 2234566677777775 4443 245788887665432221100 00
Q ss_pred -------------------------------CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 238 -------------------------------GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 238 -------------------------------~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
...........|...+..+.++|++.. ++.+. ++.|++||..+++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~d~~~~~~~ 285 (346)
T d1jmxb_ 208 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV-LNRLAKYDLKQRKLI 285 (346)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE-ESEEEEEETTTTEEE
T ss_pred EeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCE-EEEec-CCeEEEEECCCCcEE
Confidence 000111223345667788888888884 44444 457999999998877
Q ss_pred eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 287 KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
..+.. ...+..++|+|||+++++++.++. |++||..+++.+.++.-..
T Consensus 286 ~~~~~----~~~~~~va~s~DG~~l~v~~~d~~-----------v~v~D~~t~~~i~~i~~p~ 333 (346)
T d1jmxb_ 286 KAANL----DHTYYCVAFDKKGDKLYLGGTFND-----------LAVFNPDTLEKVKNIKLPG 333 (346)
T ss_dssp EEEEC----SSCCCEEEECSSSSCEEEESBSSE-----------EEEEETTTTEEEEEEECSS
T ss_pred EEEcC----CCCEEEEEEcCCCCEEEEEeCCCc-----------EEEEECccCCEEEEEECCC
Confidence 66653 345778899999999999999988 8999999999988876443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=1.8e-16 Score=144.36 Aligned_cols=274 Identities=8% Similarity=0.051 Sum_probs=183.4
Q ss_pred ceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEe-cCceEEEEEeeecc-------ccccCCC
Q psy4571 48 DAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCI-LNISILFFEIIFTQ-------NFPFPLS 105 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~-~~~~i~~~~~~~~~-------~~~~~~~ 105 (437)
..+++++.|++|++|+.+ .+.+..+++++++..+ ++. .++.|.+|++.... .......
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~ 84 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 84 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence 356778889999999843 2446677788888877 333 47889999865322 2234456
Q ss_pred cceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 106 RQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
+..++|+| ++++|++++ .++.|.+|+..... .........+...+.++.++|++++++.....+..|.+|+......
T Consensus 85 p~~l~~sp-Dg~~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 85 LTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp CSEEEECT-TSSEEEEEETTTTEEEEEEEETTE-EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred ceEEEEcC-CCCEEeecccCCCceeeecccccc-ceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCc
Confidence 78899999 566666666 47789999887432 1222334456677889999999997555555677899999887543
Q ss_pred eeeE-----eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE---ecCccccEEEE
Q psy4571 185 KLHS-----FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI---HGGHTAKISDF 256 (437)
Q Consensus 185 ~~~~-----~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~l 256 (437)
.... ..........++|++++..++.+....+...+++........... ..+.. ..........+
T Consensus 163 ~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 235 (333)
T d1ri6a_ 163 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV-------QTLDMMPENFSDTRWAADI 235 (333)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE-------EEEECSCTTCCSCCCEEEE
T ss_pred ceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeee-------eeeeeeecCCCccccceeE
Confidence 2211 122345568999999998766666677888899876543221100 00000 01223456788
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC-CCCcccccccccccccccc-
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLF- 334 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~w- 334 (437)
+++++++++++++..++.+.+|++..................+..++|+|||++|++++ .++. |++|
T Consensus 236 ~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~-----------v~v~~ 304 (333)
T d1ri6a_ 236 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHH-----------ISVYE 304 (333)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCE-----------EEEEE
T ss_pred EEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCe-----------EEEEE
Confidence 99999998888888899999999987766555544333344566789999999877654 4565 6776
Q ss_pred -cchhhhh
Q psy4571 335 -DILVCEE 341 (437)
Q Consensus 335 -d~~~~~~ 341 (437)
|..+|++
T Consensus 305 id~~tG~l 312 (333)
T d1ri6a_ 305 IVGEQGLL 312 (333)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 5566654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=3.5e-16 Score=142.35 Aligned_cols=266 Identities=11% Similarity=0.103 Sum_probs=170.4
Q ss_pred EEEecCceEEEEEeeec------cccccCCCcceEEeeCCCCCEE-EEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE
Q psy4571 81 ISCILNISILFFEIIFT------QNFPFPLSRQDVAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~------~~~~~~~~v~~~~~sp~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~ 153 (437)
++...+++|++|++... +.+.++..+..++|+| ++++| +++..|+.|++|++..............+...+.
T Consensus 8 v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~ 86 (333)
T d1ri6a_ 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT 86 (333)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred EECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence 45668889999997532 3456788999999999 46665 5555689999999985432212222223445677
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.++|+|||+++++++..++.|.+|+....... ......+...+.++.++|++++++.....+..|.+|+..........
T Consensus 87 ~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (333)
T d1ri6a_ 87 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 166 (333)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred EEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceee
Confidence 89999999974444446889999988764431 22334566778899999999975655556778999998775432210
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee--eee-----cccCCceeeeec
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR--LDS-----IRSNGGISSTAS 305 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~-----~~~~~~~~~~~s 305 (437)
...............++|++++.....+....+...+|+........... ... .........+++
T Consensus 167 --------~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 238 (333)
T d1ri6a_ 167 --------DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 238 (333)
T ss_dssp --------EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred --------eceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEe
Confidence 00111223345678899999999666677778888899876543322111 100 111233445789
Q ss_pred CCCCccccc-CCCCcccccccccccccccccchhhhhhhhhcC---CCccccccCCCCCCccccc
Q psy4571 306 PTASSTASE-SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG---TEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 306 ~~g~~l~s~-s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~---h~~~~~~~~~~~~~~~~~~ 366 (437)
++++++... ..++. +.+|++........+.+ ....+..+.++|+|+.+..
T Consensus 239 ~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~v 292 (333)
T d1ri6a_ 239 PDGRHLYACDRTASL-----------ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA 292 (333)
T ss_dssp TTSSEEEEEETTTTE-----------EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred cccCceeeecccCCe-----------EEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEE
Confidence 999866654 34444 66777665544333322 2344567889999986543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.70 E-value=3.7e-15 Score=135.40 Aligned_cols=212 Identities=10% Similarity=-0.018 Sum_probs=147.0
Q ss_pred ccceeEEEEeeCCCcceE-EEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 33 SIYRFYRLCVAEPFDDAV-EERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l-~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
....+..++|+ |+++.+ ++++.++.|.+||..++.+......+.... ....+..++|
T Consensus 32 ~~~~~~~i~~s-pDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~---------------------~~~~~~~v~~ 89 (337)
T d1pbyb_ 32 AGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE---------------------RVKSLFGAAL 89 (337)
T ss_dssp CTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE---------------------EEECTTCEEE
T ss_pred CCCCccEEEEC-CCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcc---------------------cccceeeEEE
Confidence 34556789999 998876 577789999999998887765543322111 1134568999
Q ss_pred eCCCCCEEEEEE------------CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 112 HLLHESLFGSVA------------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 112 sp~~~~~l~~~~------------~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
+| +++.++++. .++.+.+||.. ..+....+. +...+.+++|+|+|++ +++++.+ +.+||.
T Consensus 90 s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~--~~~~d~ 161 (337)
T d1pbyb_ 90 SP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFE-APRQITMLAWARDGSK-LYGLGRD--LHVMDP 161 (337)
T ss_dssp CT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEE-CCSSCCCEEECTTSSC-EEEESSS--EEEEET
T ss_pred cC-CCcEEEEeecCCcceeeeccccccceeecccc---CCeEEEecc-ccCCceEEEEcCCCCE-EEEEcCC--cceeee
Confidence 99 566666554 46788899988 445555554 3456888999999997 7777544 667777
Q ss_pred CCCce-----------------------------------------------------------------eeeEeccCCC
Q psy4571 180 RNLKL-----------------------------------------------------------------KLHSFESHKD 194 (437)
Q Consensus 180 ~~~~~-----------------------------------------------------------------~~~~~~~h~~ 194 (437)
.+++. ....+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T d1pbyb_ 162 EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241 (337)
T ss_dssp TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS
T ss_pred ecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCc
Confidence 65321 0111122344
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
.+..++++|++.. ++.+ ++.|++||+.+.+.. ... .+...+.+++|+|||+ .+++++.|+.
T Consensus 242 ~~~~~~~~~~~~~-~~~~--~~~i~v~d~~~~~~~--------------~~~-~~~~~~~~~~~s~dG~-~l~v~~~~~~ 302 (337)
T d1pbyb_ 242 FYFSTAVNPAKTR-AFGA--YNVLESFDLEKNASI--------------KRV-PLPHSYYSVNVSTDGS-TVWLGGALGD 302 (337)
T ss_dssp CEEEEEECTTSSE-EEEE--ESEEEEEETTTTEEE--------------EEE-ECSSCCCEEEECTTSC-EEEEESBSSE
T ss_pred ceEEEEecccceE-EEEc--cccEEEEECCCCcEE--------------EEE-cCCCCEEEEEECCCCC-EEEEEeCCCc
Confidence 4566777788774 4443 589999999986432 223 3455688999999999 6778899999
Q ss_pred EEEEeCCCCCCceeeeeee
Q psy4571 275 MQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~ 293 (437)
|++||.++++.+..+....
T Consensus 303 i~v~D~~t~~~v~~i~~~g 321 (337)
T d1pbyb_ 303 LAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEEETTTCCEEEEEECGG
T ss_pred EEEEECCCCcEEEEEECCC
Confidence 9999999999888887643
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.69 E-value=1e-14 Score=134.99 Aligned_cols=294 Identities=7% Similarity=-0.084 Sum_probs=185.8
Q ss_pred eeEEEEeeCCCcceEEEe-----eccCceEeeecCCCcee---------EEEecCCCCeEEEe-----------cCceEE
Q psy4571 36 RFYRLCVAEPFDDAVEER-----VINEEYKIWKKNTPFLY---------DLVVNNYVANISCI-----------LNISIL 90 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tg-----s~d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~-----------~~~~i~ 90 (437)
.+..++++ |+++.++.. +.++.+.+||..++.+. .+.+++++..+... .++.|.
T Consensus 22 p~~~~a~s-pdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~ 100 (373)
T d2madh_ 22 PTNDEAPG-ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CccccccC-CCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCccEEEcCCCCEEEEEeecCCcccccccceEEE
Confidence 35667788 999888664 23346888886655544 45677777776443 356799
Q ss_pred EEEeeeccccc---c--------CCCcceEEeeCCCCCEEEE-EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 91 FFEIIFTQNFP---F--------PLSRQDVAWHLLHESLFGS-VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 91 ~~~~~~~~~~~---~--------~~~v~~~~~sp~~~~~l~~-~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+||....+... . ......+.|+|++...++. ...++.+.+|+... .+.. .+.....++.++
T Consensus 101 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~s 173 (373)
T d2madh_ 101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGG---SSDD----QLLSSPTCYHIH 173 (373)
T ss_pred EEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccC---CeEE----EEeccceeEEEe
Confidence 99977654321 1 1123568899954433322 24456788888873 2322 233456789999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSFES------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
|+++.++++.+.|+.+.+|+...... ...... .......+.+.+++. ++..+.++.+.+|+..........
T Consensus 174 ~~g~~~~v~~~~dg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~ 250 (373)
T d2madh_ 174 PGAPSTFYLLCAQGGLAKTDHAGGAA-GAGLVGAMLTAAQNLLTQPAQANKSGR--IVWPVYSGKILQADISAAGATNKA 250 (373)
T ss_pred cCCCcEEEEEcCCCeEEEEEcCCcee-eEEEeeeccccCccceeeeEEECCCce--EEEecCCceEEEEEcCCCeEEEEE
Confidence 99998788999999999999988554 332221 112234455666654 556678899999998875432111
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCe---------EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPW---------VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
..... ... .............++++|++.. .+++...++.+.+||..+++.+..+.. ...+..++
T Consensus 251 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~----~~~~~~~a 324 (373)
T d2madh_ 251 PIDAL-SGG-RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAIS 324 (373)
T ss_pred eeccc-cCc-EEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecC----CCCeeEEE
Confidence 00000 000 0000011122334455555542 344566778899999999988776653 35567789
Q ss_pred ecCCCC--cccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCC
Q psy4571 304 ASPTAS--STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS 357 (437)
Q Consensus 304 ~s~~g~--~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~ 357 (437)
|+|||+ ++++++.+++ +++||+.+|++++++.++......+..
T Consensus 325 ~spDG~~~l~vt~~~d~~-----------v~v~D~~tg~~~~~~~~~g~~P~~l~~ 369 (373)
T d2madh_ 325 VAQDGGPDLYALSAGTEV-----------LHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred ECCCCCEEEEEEeCCCCe-----------EEEEECCCCCEEEEECCCCCCCcEEEE
Confidence 999998 4567888888 899999999999999877655554443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.68 E-value=4.5e-17 Score=148.92 Aligned_cols=287 Identities=11% Similarity=0.042 Sum_probs=181.0
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
++|++ ++++|++++.+++|.+||+. +.+.+..+. .|...+.+++|+|||++++++++.++.|.+||+.+++. +.
T Consensus 2 ~a~~~-~~~~l~~~~~~~~v~v~D~~---t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~-~~ 76 (346)
T d1jmxb_ 2 PALKA-GHEYMIVTNYPNNLHVVDVA---SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TF 76 (346)
T ss_dssp CCCCT-TCEEEEEEETTTEEEEEETT---TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EE
T ss_pred ccCCC-CCcEEEEEcCCCEEEEEECC---CCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCee-ee
Confidence 46788 78999999999999999999 566777665 45667889999999998678888999999999999765 44
Q ss_pred EeccCC------CceEEEEEcCCCCcEEEEE-----------eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 188 SFESHK------DEIFQVQWSPHNETILASS-----------GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 188 ~~~~h~------~~v~~v~~~p~~~~~l~sg-----------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.+.... ..+..++|+|+|++++++. ..++.+.+||..++...... .. ....
T Consensus 77 ~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~-~~~~ 144 (346)
T d1jmxb_ 77 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV-----------RT-FPMP 144 (346)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS-----------EE-EECC
T ss_pred eecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEE-----------Ee-eecc
Confidence 443221 2356799999999644443 25778999998876543331 11 1112
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC-CCcccccc-----
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP-TPTNSVHE----- 324 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~----- 324 (437)
..+..+.+++++. ++++ ++.+.+|++.+++....+.. ........++|++..+..... ++...+..
T Consensus 145 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (346)
T d1jmxb_ 145 RQVYLMRAADDGS-LYVA---GPDIYKMDVKTGKYTVALPL----RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216 (346)
T ss_dssp SSCCCEEECTTSC-EEEE---SSSEEEECTTTCCEEEEECS----TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred CceEEEEecCCCE-EEEe---CCcceEEEccCCCEEEEEec----CCCccceEEeccccEEEEEecCCCceEeeeeeeee
Confidence 3455567777777 5543 25689999998877666543 334455678888887654433 23322221
Q ss_pred ---------cccccccccccchhhhhhhh-hcCCCccccccCCCCCCccccc------cccccCHHHHHH---HHHhhhc
Q psy4571 325 ---------KNYWQGLVLFDILVCEEQRQ-LLGTEEESSDRHSSDNDTEDLN------SIWSMTDEQREY---YKTQFHN 385 (437)
Q Consensus 325 ---------~~~~~~i~~wd~~~~~~~~~-~~~h~~~~~~~~~~~~~~~~~~------~~w~~~~~~~~~---~~~~f~~ 385 (437)
......+.+||..++..... +.+|...+....+++++..++. .+|+....+... .......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 296 (346)
T d1jmxb_ 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296 (346)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCCE
T ss_pred ccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCCCEEE
Confidence 12233377888888775543 4566666777777776655443 266664332110 1112223
Q ss_pred cccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccCCcccceeecc
Q psy4571 386 LQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPDSNKILSTWNV 436 (437)
Q Consensus 386 ~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~~~~~~~~~~~ 436 (437)
+.+.++++ . +..|..... -.|||.+|++.+.+..+
T Consensus 297 va~s~DG~---~-l~v~~~d~~------------v~v~D~~t~~~i~~i~~ 331 (346)
T d1jmxb_ 297 VAFDKKGD---K-LYLGGTFND------------LAVFNPDTLEKVKNIKL 331 (346)
T ss_dssp EEECSSSS---C-EEEESBSSE------------EEEEETTTTEEEEEEEC
T ss_pred EEEcCCCC---E-EEEEeCCCc------------EEEEECccCCEEEEEEC
Confidence 33333311 1 222211111 25999999999998865
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.64 E-value=2.6e-15 Score=137.97 Aligned_cols=288 Identities=10% Similarity=-0.039 Sum_probs=173.9
Q ss_pred CCcceEEEe-----eccCceEeeecCCCcee---------EEEecCCCCeEEEe-----------cCceEEEEEeeeccc
Q psy4571 45 PFDDAVEER-----VINEEYKIWKKNTPFLY---------DLVVNNYVANISCI-----------LNISILFFEIIFTQN 99 (437)
Q Consensus 45 ~~~~~l~tg-----s~d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~-----------~~~~i~~~~~~~~~~ 99 (437)
|++.+++.. +.+..+.+||..++.+. .+.+++++..+.+. .++.|.+||....+.
T Consensus 11 pdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~ 90 (355)
T d2bbkh_ 11 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 90 (355)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCE
Confidence 777777653 34456888887665543 44677777766432 356789998654332
Q ss_pred c-----------ccCCCcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCC-------CeEEEEEeC
Q psy4571 100 F-----------PFPLSRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTA-------EVNCLSFNP 159 (437)
Q Consensus 100 ~-----------~~~~~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~-------~v~~l~~~~ 159 (437)
. ........++|+| +++.++.+. .+..+.+|+.. ..+.+..+..+.. ....+.+++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (355)
T d2bbkh_ 91 TADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLE---GKAFKRMLDVPDCYHIFPTAPDTFFMHCR 166 (355)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETT---TTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred EEEEecCCcceeecCCCCceEEEec-CCCeeEEecCCCCceeeeeecC---CCcEeeEEecCCcceEeecCCcceEEEcC
Confidence 1 1223457899999 566665554 45688999998 4444544443321 223345556
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
++..+++....++.+.+.+...... .+...+....+.+++.. ++.++.++.+++|++..+......... ..
T Consensus 167 dg~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~ 237 (355)
T d2bbkh_ 167 DGSLAKVAFGTEGTPEITHTEVFHP------EDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVE--AL 237 (355)
T ss_dssp TSCEEEEECCSSSCCEEEECCCCSC------TTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEECCCEE--SS
T ss_pred CCCEEEEEecCCCeEEEEecccccc------eecceeeeccccCCCCe-EEEecCCCeEEEEecCCCcEEEEeccC--Cc
Confidence 6554333444445555555443221 23344555677777774 778899999999999876432110000 00
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeC---------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSE---------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS- 309 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~- 309 (437)
................++++|++..++++... ...|.+||..+++.+..+... ..+..++|+|||+
T Consensus 238 ~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~----~~~~~~a~spDG~~ 313 (355)
T d2bbkh_ 238 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQDEKP 313 (355)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECCSSSC
T ss_pred ccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC----CCEEEEEEcCCCCe
Confidence 00000000001122457899999855544332 247999999999887776542 3456789999998
Q ss_pred -cccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCC
Q psy4571 310 -STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDN 360 (437)
Q Consensus 310 -~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~ 360 (437)
++++++.++. |++||..+|++++++.++......+...++
T Consensus 314 ~l~v~~~~d~~-----------i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~ 354 (355)
T d2bbkh_ 314 LLYALSTGDKT-----------LYIHDAESGEELRSVNQLGHGPQVITTADM 354 (355)
T ss_dssp EEEEEETTTTE-----------EEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred EEEEEECCCCE-----------EEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence 4566777787 899999999999999776554555544443
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.61 E-value=2.7e-13 Score=125.24 Aligned_cols=232 Identities=7% Similarity=-0.078 Sum_probs=151.4
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCceeEEEe------------------cCCCCeEE-E--ecCc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYDLVV------------------NNYVANIS-C--ILNI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~~~~------------------~~~~~~i~-~--~~~~ 87 (437)
.++|+ |+++.++.++ .++.|++||..++.+..... .+....+. . ..+.
T Consensus 70 ~~a~S-pDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~ 148 (373)
T d2madh_ 70 NPVAA-HSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred cEEEc-CCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC
Confidence 58899 9999998865 45789999988776654332 22222221 1 1233
Q ss_pred eEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc------CCCCeEEEEEeCCC
Q psy4571 88 SILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYS 161 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~ 161 (437)
.+.+|+....+.........++.++|++...+++.+.||.+.+|+.... ........ +......+.+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (373)
T d2madh_ 149 AVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGG---AAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred ceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCc---eeeEEEeeeccccCccceeeeEEECCCc
Confidence 4555555544444555667899999977778889999999999999843 32222221 12223445556555
Q ss_pred CcEEEEEeCCCeEEEEeCCCCcee-eeEeccC----------CCceEEEEEcCCCCcE---------EEEEeCCCeEEEE
Q psy4571 162 EYILATGSADKTVALWDLRNLKLK-LHSFESH----------KDEIFQVQWSPHNETI---------LASSGTDRRLHVW 221 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~h----------~~~v~~v~~~p~~~~~---------l~sg~~dg~i~vw 221 (437)
. ++..+.++.+.+|+....... ......+ ......++++|++..+ +++...++.+.+|
T Consensus 226 ~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 303 (373)
T d2madh_ 226 R--IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred e--EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEE
Confidence 4 667778999999998875421 1111111 1223445566655432 3445667789999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE-EEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV-ICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|..+++.... + .+...+.+++|+|||+.+ +++++.|+.|++||+.+++.++.+..
T Consensus 304 d~~t~~~~~~--------------~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~ 359 (373)
T d2madh_ 304 TGLVGQTSSQ--------------I-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVE 359 (373)
T ss_pred ECCCCcEEEE--------------e-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECC
Confidence 9988654322 2 355678999999999864 57889999999999999998887753
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.49 E-value=1.6e-12 Score=118.93 Aligned_cols=227 Identities=9% Similarity=-0.040 Sum_probs=138.2
Q ss_pred EEEeeCCCcceEEEe----------eccCceEeeecCCCceeEE------------------EecCCCCeEEE---ecCc
Q psy4571 39 RLCVAEPFDDAVEER----------VINEEYKIWKKNTPFLYDL------------------VVNNYVANISC---ILNI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tg----------s~d~~v~iw~~~~~~~~~~------------------~~~~~~~~i~~---~~~~ 87 (437)
.++|+ |+++.|+.. ..|+.|++||..++..... .+++....+.. ..+.
T Consensus 51 ~~a~S-pDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~ 129 (355)
T d2bbkh_ 51 NPVVA-DDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 129 (355)
T ss_dssp EEEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred ceEEc-CCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCc
Confidence 58999 999988753 4578999999877665543 34455554422 2344
Q ss_pred eEEEEEeeeccccc---cCC--------CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 88 SILFFEIIFTQNFP---FPL--------SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 88 ~i~~~~~~~~~~~~---~~~--------~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
.+.+|+........ .+. ....+.+++++..+++....++.+.+++..... ..+...+....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 201 (355)
T d2bbkh_ 130 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH--------PEDEFLINHPA 201 (355)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS--------CTTSCBCSCCE
T ss_pred eeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc--------ceecceeeecc
Confidence 67777754433221 111 122334444222222222233333333333111 12333455667
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeee-EeccC----------CCceEEEEEcCCCCcEEEEEeCC---------C
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLH-SFESH----------KDEIFQVQWSPHNETILASSGTD---------R 216 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~-~~~~h----------~~~v~~v~~~p~~~~~l~sg~~d---------g 216 (437)
+.+++.. ++.++.++.+.+|++..+..... ....+ ......++++|++..++++.... .
T Consensus 202 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 280 (355)
T d2bbkh_ 202 YSQKAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 280 (355)
T ss_dssp EETTTTE-EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred ccCCCCe-EEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCC
Confidence 8888875 88899999999999987653211 11111 12334588999998644443322 3
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe-EEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-VICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.|.+||..+++... .+. +...+.+++|+|||+. ++++++.|+.|++||+++++.++++.
T Consensus 281 ~v~v~d~~t~~~~~--------------~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 281 FVVVLDAKTGERLA--------------KFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340 (355)
T ss_dssp EEEEEETTTCCEEE--------------EEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred eEEEEeCCCCcEEE--------------Eec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence 69999998864332 232 3356889999999974 56777889999999999999888775
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.37 E-value=5.7e-13 Score=123.55 Aligned_cols=302 Identities=8% Similarity=-0.040 Sum_probs=174.2
Q ss_pred eEEEeeccCceEeeecCCCceeEEE--ecCCCCeEEEecCceEEEEEe--eeccccccCCCcceEEeeCCCCCEEEEEEC
Q psy4571 49 AVEERVINEEYKIWKKNTPFLYDLV--VNNYVANISCILNISILFFEI--IFTQNFPFPLSRQDVAWHLLHESLFGSVAD 124 (437)
Q Consensus 49 ~l~tgs~d~~v~iw~~~~~~~~~~~--~~~~~~~i~~~~~~~i~~~~~--~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~ 124 (437)
.+++|+.+|.|++|+..+..++..+ |++.........+.+.+++.. ....-..+........++|++..++++...
T Consensus 13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~ 92 (441)
T d1qnia2 13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKA 92 (441)
T ss_dssp EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCC
Confidence 4678899999999999887776654 233322221111111111100 000000122233445567844334455567
Q ss_pred CCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeE------------------EEEeCCCCcee
Q psy4571 125 DQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTV------------------ALWDLRNLKLK 185 (437)
Q Consensus 125 dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i------------------~lwd~~~~~~~ 185 (437)
++.|.++|++ ..+....+. .+...+..++|+|+++...+.+..+..+ ..+|..+.+.
T Consensus 93 ~~rVavIDl~---t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v- 168 (441)
T d1qnia2 93 NTRVARIRLD---IMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV- 168 (441)
T ss_dssp TTEEEEEETT---TTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE-
T ss_pred CCEEEEEECC---CCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee-
Confidence 8899999998 444444433 3566799999999998644444333333 4578887555
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC--------------------CCC------CCCCC
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS--------------------TED------AEDGP 239 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~--------------------~~~------~~~~~ 239 (437)
..++.. .+....++++|+|+++++++.....+..++..+...... ... .....
T Consensus 169 ~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~ 247 (441)
T d1qnia2 169 AWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGE 247 (441)
T ss_dssp EEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSS
T ss_pred eEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccC
Confidence 334432 345688999999997555543322222222111110000 000 00011
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC--------ceeeeeeecccCCceeeeecCCCCcc
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD--------TKTMRLDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~~s~~g~~l 311 (437)
...++.....+. ...+.++|||+++++++..+++|.+||+++... ...+..+.....++...+|+++|...
T Consensus 248 ~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~y 326 (441)
T d1qnia2 248 SEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAY 326 (441)
T ss_dssp CSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEE
T ss_pred CceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEE
Confidence 123344444333 477999999998889999999999999875321 12222222233445566899999988
Q ss_pred cccCCCCcccccccccccccccccchhhh---------------hhhhhcCCCccccccCCCCCCcccccc
Q psy4571 312 ASESPTPTNSVHEKNYWQGLVLFDILVCE---------------EQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 312 ~s~s~d~~~~~~~~~~~~~i~~wd~~~~~---------------~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+...|.. +..|++.... .++...||...+....++|+|+.+++.
T Consensus 327 ts~~~ds~-----------v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~ 386 (441)
T d1qnia2 327 TTLFIDSQ-----------VCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL 386 (441)
T ss_dssp EEETTTTE-----------EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred Ecccccce-----------EEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec
Confidence 88888887 5666653221 112226898889999999999976653
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.32 E-value=8.9e-12 Score=114.90 Aligned_cols=263 Identities=8% Similarity=-0.053 Sum_probs=156.4
Q ss_pred EEEeeCCCcceEEEe----------eccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 39 RLCVAEPFDDAVEER----------VINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 39 ~~~~~~~~~~~l~tg----------s~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
.++|+ |+++.|+.. +.|+.|++||..++.+....-.+..... ........
T Consensus 69 ~~a~s-pDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~-------------------~~g~~p~~ 128 (368)
T d1mdah_ 69 LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF-------------------SVGPRVHI 128 (368)
T ss_dssp EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC-------------------CBSCCTTS
T ss_pred cceEC-CCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCcccee-------------------cccCCccc
Confidence 36677 777777664 3467788888777666544332222111 11233457
Q ss_pred EEeeCCCCCEEEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 109 VAWHLLHESLFGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 109 ~~~sp~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
++|+|+ +++++++ ..++.+.+||+. ..+....+..+.... +.|.+...+++.+.||.+.++++........
T Consensus 129 ~a~SpD-Gk~l~va~~~~~~v~~~d~~---~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~ 200 (368)
T d1mdah_ 129 IGNCAS-SACLLFFLFGSSAAAGLSVP---GASDDQLTKSASCFH----IHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp EEECTT-SSCEEEEECSSSCEEEEEET---TTEEEEEEECSSCCC----CEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred eEECCC-CCEEEEEeCCCCeEEEEECC---CCcEeEEeeccCcce----EccCCCceEEEEcCCCCEEEEEecCCceeee
Confidence 999995 5555555 467999999998 455555555443321 2334444577888899999998876443221
Q ss_pred E-----eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 188 S-----FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 188 ~-----~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. ...+...+....+.+++. .+.+ .++.+.+++..................... ..........++++|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~a~~~~~ 275 (368)
T d1mdah_ 201 IVGAQCTGAQNCSSQAAQANYPGM-LVWA--VASSILQGDIPAAGATMKAAIDGNESGRKA--DNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTE-EEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHH--TTEEECSSSCEEEETTT
T ss_pred eeecccccccccceeecccccCcE-EEEe--cCCCEEEEeecCCceEEEeecccccceeee--eeecCCCceeEEEcCCC
Confidence 1 223444556677888775 2333 356677777765443211100000000000 00001112347889998
Q ss_pred CeEEEEEeCC--------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc--ccccCCCCcccccccccccccc
Q psy4571 263 PWVICSVSED--------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS--TASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 263 ~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~--l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
..+++....+ ..|.+||..+++.+..+... .....++|+|||+. ++++..++. ++
T Consensus 276 ~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~----~~~~~~a~spDG~~~ly~s~~~~~~-----------v~ 340 (368)
T d1mdah_ 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG----HDSDAIIAAQDGASDNYANSAGTEV-----------LD 340 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE----EEECEEEECCSSSCEEEEEETTTTE-----------EE
T ss_pred CEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC----CceeEEEECCCCCEEEEEEeCCCCe-----------EE
Confidence 8555443322 35999999999887776542 34556799999974 456677777 89
Q ss_pred cccchhhhhhhhhcCCC
Q psy4571 333 LFDILVCEEQRQLLGTE 349 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~ 349 (437)
+||..+|+.++++....
T Consensus 341 v~D~~tgk~~~~i~~g~ 357 (368)
T d1mdah_ 341 IYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEESSSCEEEEECCCCS
T ss_pred EEECCCCCEEEEEECCC
Confidence 99999999998886543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.26 E-value=6.3e-12 Score=115.96 Aligned_cols=232 Identities=11% Similarity=-0.022 Sum_probs=133.7
Q ss_pred eEEeeCCCCCEEEEEE----------CCCcEEEEEcCCCCCCCCeeeeccCCC-------CeEEEEEeCCCCcEEEEEeC
Q psy4571 108 DVAWHLLHESLFGSVA----------DDQKLMIWDTRSHNVSKPSHTVDAHTA-------EVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~----------~dg~v~vwd~~~~~~~~~~~~~~~h~~-------~v~~l~~~~~~~~~l~sgs~ 170 (437)
.++|+| ++..+++.+ .|+.|.+||.. ..+++..+..+.. ....++|+|||++++++...
T Consensus 69 ~~a~sp-Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~---t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~ 144 (368)
T d1mdah_ 69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPV---TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTT---TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred cceECC-CCCEEEEEcccCccccccccCCeEEEEECC---CCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCC
Confidence 578899 456555543 36789999998 4555555443321 23468999999985555556
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
++.+.+||+.+.+. ...+..+.... ..|.++..++..+.||.+.++++............ .....+.
T Consensus 145 ~~~v~~~d~~~~~~-~~~~~~~~~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 211 (368)
T d1mdah_ 145 SSAAAGLSVPGASD-DQLTKSASCFH----IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGA--------QCTGAQN 211 (368)
T ss_dssp SSCEEEEEETTTEE-EEEEECSSCCC----CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCC--------CSCTTSC
T ss_pred CCeEEEEECCCCcE-eEEeeccCcce----EccCCCceEEEEcCCCCEEEEEecCCceeeeeeec--------ccccccc
Confidence 89999999999654 55554433321 23334445677788888888887765433221100 0122333
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee---------cccCCceeeeecCCCCcccccCCCCccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS---------IRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
..+..+.+.+++. .+.+ .++.+++++...+.......... ....+...++++|++..++....++...
T Consensus 212 ~~~~~~~~~~~g~-~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~ 288 (368)
T d1mdah_ 212 CSSQAAQANYPGM-LVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS 288 (368)
T ss_dssp BCSCCEEETTTTE-EEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSC
T ss_pred cceeecccccCcE-EEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCce
Confidence 4445566777765 3333 34556666665543322111100 0112334457777777655432221111
Q ss_pred ccccccccccccccchhhhhhhhhcCCCccccccCCCCCCc
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
. ......+.+||..+++.+..+... ..+..+.++|||+
T Consensus 289 ~--~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~~a~spDG~ 326 (368)
T d1mdah_ 289 C--LAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGA 326 (368)
T ss_dssp T--TSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSS
T ss_pred e--ecCCceEEEEECCCCcEeEEecCC-CceeEEEECCCCC
Confidence 0 011123789999999988877644 4577788999986
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.17 E-value=4.5e-10 Score=103.86 Aligned_cols=205 Identities=6% Similarity=0.019 Sum_probs=119.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcE------------------EEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKL------------------MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v------------------~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 163 (437)
....+..++|+|++...++++..+..+ ..+|.. ..+....... .+....++|+|+|++
T Consensus 114 ~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~---t~~v~~qI~v-~~~p~~v~~spdGk~ 189 (441)
T d1qnia2 114 NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAE---TMDVAWQVIV-DGNLDNTDADYTGKY 189 (441)
T ss_dssp TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETT---TCSEEEEEEE-SSCCCCEEECSSSSE
T ss_pred CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCc---cceeeEEEec-CCCccceEECCCCCE
Confidence 345677899998544433333333333 346666 3344434333 235678999999997
Q ss_pred EEEEEeC----------------------------------------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 164 ILATGSA----------------------------------------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 164 ~l~sgs~----------------------------------------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
+++++.. ++.+.+++....+. +..+..... ...++++|
T Consensus 190 a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v-~~~IPvgks-PhGv~vSP 267 (441)
T d1qnia2 190 ATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEF-TRYIPVPKN-PHGLNTSP 267 (441)
T ss_dssp EEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSS-EEEECCBSS-CCCEEECT
T ss_pred EEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCce-EEEEeCCCC-ccCceECC
Confidence 4444322 23344444443232 444544433 47899999
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST- 282 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~- 282 (437)
||+++++++..+++|.|||+.+....... .......+.-.....-.....+|.++|. .+.+...|..|..|++..
T Consensus 268 DGkyl~~~~~~~~tvsv~d~~k~~~~~~~---~~~~~~~~~~~~~~glgplh~~fd~~g~-~yts~~~ds~v~kw~~~~~ 343 (441)
T d1qnia2 268 DGKYFIANGKLSPTVSVIAIDKLDDLFED---KIELRDTIVAEPELGLGPLHTTFDGRGN-AYTTLFIDSQVCKWNIADA 343 (441)
T ss_dssp TSCEEEEECTTSSBEEEEEGGGHHHHTTT---SSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTTEEEEEEHHHH
T ss_pred CCCEEEEeCCcCCcEEEEEeehhhhHhhc---cCCcceEEEeecccccCcccceecCCce-EEEcccccceEEEeccchh
Confidence 99998889999999999999764321110 0001111111111112345568999987 788889999999999742
Q ss_pred -----CCC----ceeeee--eecccCCceeeeecCCCCcccccCC
Q psy4571 283 -----DSD----TKTMRL--DSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 283 -----~~~----~~~~~~--~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+.. ...+.. ...|.......+++|||++|++++.
T Consensus 344 ~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k 388 (441)
T d1qnia2 344 IKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK 388 (441)
T ss_dssp HHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred hhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence 111 111111 1234455566689999999999943
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.16 E-value=3.1e-09 Score=100.86 Aligned_cols=291 Identities=8% Similarity=-0.022 Sum_probs=156.5
Q ss_pred cCCcccccceeEEEEeeCCCcceEEEeec---------cCceEeeecCCC----------ceeEEEecCCCCeEEEecCc
Q psy4571 27 ALPLSHSIYRFYRLCVAEPFDDAVEERVI---------NEEYKIWKKNTP----------FLYDLVVNNYVANISCILNI 87 (437)
Q Consensus 27 ~~~~~~~~~~v~~~~~~~~~~~~l~tgs~---------d~~v~iw~~~~~----------~~~~~~~~~~~~~i~~~~~~ 87 (437)
...+......|.++.|+ |+++.|+.++. ++.+.+|+.+++ .+....|+|++..++...+.
T Consensus 54 ~~~~~~~~~~i~~~~~S-pDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~~~ 132 (470)
T d2bgra1 54 NSTFDEFGHSINDYSIS-PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNN 132 (470)
T ss_dssp TTTTTTSSSCCCEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETT
T ss_pred hhhhhhccCccceeEEC-CCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccccccccCcceeeEeecc
Confidence 33444445568899999 99999998754 456778886543 46778899999999999999
Q ss_pred eEEEEEeeeccccc----------------------cCCCcceEEeeCCCCCEEEEEECCCc-EEEEEc-----------
Q psy4571 88 SILFFEIIFTQNFP----------------------FPLSRQDVAWHLLHESLFGSVADDQK-LMIWDT----------- 133 (437)
Q Consensus 88 ~i~~~~~~~~~~~~----------------------~~~~v~~~~~sp~~~~~l~~~~~dg~-v~vwd~----------- 133 (437)
.+.+|+...+.... .......+.||| ++..|+....|.+ +..|.+
T Consensus 133 ~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-DGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~ 211 (470)
T d2bgra1 133 DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYP 211 (470)
T ss_dssp EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSC
T ss_pred cceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECC-CCCccceeEecCCcCceEEEEeeccCCCCCC
Confidence 99999865443221 112346788999 5777777655432 333332
Q ss_pred ------------------------CCCCCCCCeee--------eccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEE-
Q psy4571 134 ------------------------RSHNVSKPSHT--------VDAHTAEVNCLSFNPYSEYILATGSADK---TVALW- 177 (437)
Q Consensus 134 ------------------------~~~~~~~~~~~--------~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lw- 177 (437)
........... .......+..+.|.+++..++......+ .+.++
T Consensus 212 ~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~ 291 (470)
T d2bgra1 212 KTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICD 291 (470)
T ss_dssp EEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEE
T ss_pred eeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEE
Confidence 21110000000 0011223567888888773222333322 23444
Q ss_pred -eCCCCceeee------E------eccCCCceEEEEEcCCCCc-EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 178 -DLRNLKLKLH------S------FESHKDEIFQVQWSPHNET-ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 178 -d~~~~~~~~~------~------~~~h~~~v~~v~~~p~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
|..++..... . +..|... ...+.+++.. +++.+..||..++|.........
T Consensus 292 ~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~------------- 356 (470)
T d2bgra1 292 YDESSGRWNCLVARQHIEMSTTGWVGRFRPS--EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC------------- 356 (470)
T ss_dssp EETTTTEEEECGGGCEEEECSSSCSSSSSCC--CCEECTTSSEEEEEEECTTSCEEEEEEETTCSCC-------------
T ss_pred ecCCCCcEEEEEEEeeeeeeccceeecccCC--CceeeecCCCcEEEEeccCcCceeEEEeccCCce-------------
Confidence 4444332100 0 0111112 2334444433 45667778876666543322111
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCC----e--EEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCccc---c
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDN----I--MQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTA---S 313 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg----~--i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~---s 313 (437)
..+..+...|..+ ++++++.+.+++..++ . |+-.++..+.....+... ..+..+...++|||||++++ +
T Consensus 357 ~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s 435 (470)
T d2bgra1 357 TFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS 435 (470)
T ss_dssp EESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred eeeccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEec
Confidence 1233334556666 4555664555554332 1 443455544433333211 12345667889999999987 5
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
+..... +.+|+..+|+.++.+.
T Consensus 436 ~~~~P~-----------~~l~~~~~g~~v~~le 457 (470)
T d2bgra1 436 GPGLPL-----------YTLHSSVNDKGLRVLE 457 (470)
T ss_dssp SBSSCE-----------EEEEETTTTEEEEEEE
T ss_pred CCCCCe-----------EEEEECCCCCEEEEEe
Confidence 555555 4555555555555443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.10 E-value=5.4e-08 Score=88.86 Aligned_cols=251 Identities=9% Similarity=0.006 Sum_probs=138.2
Q ss_pred eeEEEecCCCCeEEEecCceEEEEEeeecc------ccccCCCcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCC---
Q psy4571 69 LYDLVVNNYVANISCILNISILFFEIIFTQ------NFPFPLSRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHN--- 137 (437)
Q Consensus 69 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~------~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~--- 137 (437)
...++++++.+.+.+...+.+..|.+.... ..+.......+++++++..++++.. ..+.|..+.+....
T Consensus 42 ~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~ 121 (365)
T d1jofa_ 42 ISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp CSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred CCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcc
Confidence 334667777777766666677777544321 1123345667888885433333332 23555554443211
Q ss_pred -------CCCC---eee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee--eEe--ccCCCceEEEEEc
Q psy4571 138 -------VSKP---SHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL--HSF--ESHKDEIFQVQWS 202 (437)
Q Consensus 138 -------~~~~---~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~--~~~--~~h~~~v~~v~~~ 202 (437)
.... ... .......+.++.|+|+|++++++......|.+|+........ ... .........++|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~ 201 (365)
T d1jofa_ 122 NVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH 201 (365)
T ss_dssp EEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC
T ss_pred eeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEEC
Confidence 0010 000 011223478999999999855555556789898866433211 111 1234568999999
Q ss_pred CCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC-----CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC----
Q psy4571 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTED-----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN---- 273 (437)
Q Consensus 203 p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg---- 273 (437)
|+++.+.++...+++|.+|++........... ..............+......+.++|+|++++++...+.
T Consensus 202 pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~ 281 (365)
T d1jofa_ 202 PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ 281 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred CCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccc
Confidence 99998777888899999999976543211000 000000000001123345678999999996666654333
Q ss_pred -eEEEEeCCCCCCceee-eeeec--ccCCceeeeecC-CCCccccc-CCCCc
Q psy4571 274 -IMQEYCDSTDSDTKTM-RLDSI--RSNGGISSTASP-TASSTASE-SPTPT 319 (437)
Q Consensus 274 -~i~iwd~~~~~~~~~~-~~~~~--~~~~~~~~~~s~-~g~~l~s~-s~d~~ 319 (437)
.|..|++.....+... ..... .......++++| +|++|+.+ ..++.
T Consensus 282 ~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~ 333 (365)
T d1jofa_ 282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred eEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCe
Confidence 3777877654333222 11111 122345578888 78977655 45566
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.06 E-value=1.2e-08 Score=96.68 Aligned_cols=150 Identities=12% Similarity=0.044 Sum_probs=98.2
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 119 (437)
+.|. ++++++.. .|+.+.+|+..++....+.-.... ..+...+.++.||| +++.|
T Consensus 22 ~~W~-~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~---------------------~~~~~~i~~~~~Sp-Dg~~i 76 (470)
T d2bgra1 22 LRWI-SDHEYLYK--QENNILVFNAEYGNSSVFLENSTF---------------------DEFGHSINDYSISP-DGQFI 76 (470)
T ss_dssp CEEC-SSSEEEEE--SSSCEEEEETTTCCEEEEECTTTT---------------------TTSSSCCCEEEECT-TSSEE
T ss_pred CEeC-CCCEEEEE--cCCcEEEEECCCCCEEEEEchhhh---------------------hhccCccceeEECC-CCCEE
Confidence 4566 66666543 366788888777765533211110 12345789999999 67777
Q ss_pred EEEEC---------CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 120 GSVAD---------DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 120 ~~~~~---------dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
+.++. ++.+.+||+.++ .+..+..|...+....|||||+. +|.. .++.+.+|+..++.. .....
T Consensus 77 ~~~~~~~~~~r~s~~~~~~l~d~~~~----~~~~l~~~~~~~~~~~~SPDG~~-ia~~-~~~~l~~~~~~~g~~-~~~t~ 149 (470)
T d2bgra1 77 LLEYNYVKQWRHSYTASYDIYDLNKR----QLITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPS-YRITW 149 (470)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTT----EECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCC-EECCS
T ss_pred EEEECCcceeeeccCceEEEEECCCC----cccccccCCccccccccccCcce-eeEe-ecccceEEECCCCce-eeeee
Confidence 77643 567899999843 34556778889999999999997 6664 577899999988654 22221
Q ss_pred c------------------CCCceEEEEEcCCCCcEEEEEeCC-CeEEEEE
Q psy4571 191 S------------------HKDEIFQVQWSPHNETILASSGTD-RRLHVWD 222 (437)
Q Consensus 191 ~------------------h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd 222 (437)
. ..+....+.|+|||++ |+....| ..+..|.
T Consensus 150 ~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~-ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIE 199 (470)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEE
T ss_pred ccCCCcccccccceeeeeeecCCccccEECCCCCc-cceeEecCCcCceEE
Confidence 1 1223456889999996 6665443 2244443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.04 E-value=2.1e-08 Score=91.71 Aligned_cols=171 Identities=12% Similarity=0.118 Sum_probs=106.9
Q ss_pred CCcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
..+.++.|+| ++++++++. ....|.+|+.............. ........++|+|+++++.++.-.+++|.+|++.
T Consensus 145 ~h~h~v~~sP-dG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~ 223 (365)
T d1jofa_ 145 TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcceEEEECC-CCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence 3568999999 566555554 35578888876432211122211 2345789999999999766777779999999987
Q ss_pred CCceee-eEec-----------------cCCCceEEEEEcCCCCcEEEEEeCCC-----eEEEEEcCCCCCCCCCCCCCC
Q psy4571 181 NLKLKL-HSFE-----------------SHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 181 ~~~~~~-~~~~-----------------~h~~~v~~v~~~p~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~ 237 (437)
...... .... .+......+.++|+|++++++...+. .|..|++.........
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~----- 298 (365)
T d1jofa_ 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ----- 298 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE-----
T ss_pred CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeE-----
Confidence 644211 1100 11223567899999997555543333 3777777654322110
Q ss_pred CCCceEEEecCccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
..+...........+++++| +|+++++++..++.|.+|+++..
T Consensus 299 ---~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 299 ---LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---eEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 11111122233457799998 78977888889999999987654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.99 E-value=7.5e-08 Score=85.45 Aligned_cols=232 Identities=9% Similarity=-0.027 Sum_probs=148.8
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
+..+++. |+++++++...+++|..++..+... ... .....+.+++|+| ++
T Consensus 30 ~e~iAv~-pdG~l~vt~~~~~~I~~i~p~g~~~-~~~---------------------------~~~~~~~gla~~~-dG 79 (302)
T d2p4oa1 30 LENLASA-PDGTIFVTNHEVGEIVSITPDGNQQ-IHA---------------------------TVEGKVSGLAFTS-NG 79 (302)
T ss_dssp EEEEEEC-TTSCEEEEETTTTEEEEECTTCCEE-EEE---------------------------ECSSEEEEEEECT-TS
T ss_pred cCCEEEC-CCCCEEEEeCCCCEEEEEeCCCCEE-EEE---------------------------cCCCCcceEEEcC-CC
Confidence 5678888 9999999888888777776554321 111 1223467899999 67
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-----
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE----- 190 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~----- 190 (437)
+++++...++.+..++..... ...... ..........+++.+++. ++++.+.++.+..+|...+...+....
T Consensus 80 ~l~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~n~i~~~~~g~-~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T d2p4oa1 80 DLVATGWNADSIPVVSLVKSD-GTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 157 (302)
T ss_dssp CEEEEEECTTSCEEEEEECTT-SCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred CeEEEecCCceEEEEEecccc-cceeeccccCCccccceeEEccCCC-EEeeccccccceeeeccCCcceeEecCCccce
Confidence 888888888999888876432 111111 123345688999999997 588888899999999887543222211
Q ss_pred ----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 191 ----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 191 ----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
........+.+. +.+++++.+.++.|..++......... ... . ........+++.++|. +.
T Consensus 158 ~~~~~~~~~~ngi~~~--~~~l~~~~~~~~~i~~~~~~~~~~~~~---------~~~--~-~~~~~pdgia~d~dG~-l~ 222 (302)
T d2p4oa1 158 SNSESVFPAANGLKRF--GNFLYVSNTEKMLLLRIPVDSTDKPGE---------PEI--F-VEQTNIDDFAFDVEGN-LY 222 (302)
T ss_dssp SSTTCCSCSEEEEEEE--TTEEEEEETTTTEEEEEEBCTTSCBCC---------CEE--E-EESCCCSSEEEBTTCC-EE
T ss_pred eeccCccccccccccc--CCceeeecCCCCeEEeccccccccccc---------ccc--c-cCCCCCcceEECCCCC-EE
Confidence 111234566665 445778888899999998876543322 111 1 1122346799999998 77
Q ss_pred EEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee---cCCCCcccccCCC
Q psy4571 267 CSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA---SPTASSTASESPT 317 (437)
Q Consensus 267 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---s~~g~~l~s~s~d 317 (437)
++...++.|..++.... ....... .....+...++| ++|++.|..++..
T Consensus 223 va~~~~~~V~~i~p~G~-~~~~~~~-~~~~~~pt~vafg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 223 GATHIYNSVVRIAPDRS-TTIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp EECBTTCCEEEECTTCC-EEEEECG-GGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEcCCCcEEEECCCCC-EEEEEec-CCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence 78888899999987642 2122211 113345667788 6788877655443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=3.4e-08 Score=85.80 Aligned_cols=224 Identities=11% Similarity=0.038 Sum_probs=132.5
Q ss_pred CCcceEEeeCCCCCEEEEEEC-CC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVAD-DQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~-dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
..+..-+||| +++.||-... .+ .+.+.+.. ......+..+.+......|+|+|..++.....++...++...
T Consensus 39 ~~~~sP~wSP-DGk~IAf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~ 113 (269)
T d2hqsa1 39 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLA----NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 113 (269)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETT----TCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CceeeeEECC-CCCEEEEEEeeccCcceeeeecc----cCceeEEeeeecccccceecCCCCeeeEeeecCCccceeecc
Confidence 4456789999 5666665443 33 35555554 233445556778889999999999755555555554444433
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe--EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
....................+++++..++++...++. |.+.++..... .....+........|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 178 (269)
T d2hqsa1 114 LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---------------QRITWEGSQNQDADV 178 (269)
T ss_dssp TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---------------EECCCSSSEEEEEEE
T ss_pred cccccceeeeeccccccccccccccccceecccccCCceEeeeecccccc---------------eeeeccccccccccc
Confidence 3232233444455556677788888876667666665 44455544322 112344556778899
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|++..++.....++...+|............. .........|||||+.|+..+..+. ...+.++++..
T Consensus 179 spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~p~~SPDG~~i~f~s~~~~--------~~~l~~~~~dg 247 (269)
T d2hqsa1 179 SSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS---STFLDETPSLAPNGTMVIYSSSQGM--------GSVLNLVSTDG 247 (269)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCCEEECC---CSSSCEEEEECTTSSEEEEEEEETT--------EEEEEEEETTS
T ss_pred ccccceeEEEeecCCceeeeEeecccccceEee---cCccccceEECCCCCEEEEEEcCCC--------CcEEEEEECCC
Confidence 999997666666666666665554433333222 2334456689999998876543221 12377888865
Q ss_pred hhhhhhhcCCCccccccCCCC
Q psy4571 339 CEEQRQLLGTEEESSDRHSSD 359 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~ 359 (437)
+.. ..+......+....++|
T Consensus 248 ~~~-~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 248 RFK-ARLPATDGQVKFPAWSP 267 (269)
T ss_dssp CCE-EECCCSSSEEEEEEECC
T ss_pred CCE-EEEeCCCCcEEeEEeCC
Confidence 543 44555444444444554
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.96 E-value=2.8e-07 Score=80.57 Aligned_cols=234 Identities=12% Similarity=0.101 Sum_probs=149.1
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
...+++. ++++++++-..++.|++|+.++..+.......... ........+++.+..+
T Consensus 25 P~gvavd-~dg~i~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~---------------------~~~~~p~~~~~~~~~~ 82 (279)
T d1q7fa_ 25 PSGVAVN-AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD---------------------SQLLYPNRVAVVRNSG 82 (279)
T ss_dssp EEEEEEC-TTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST---------------------TCBSSEEEEEEETTTT
T ss_pred ccEEEEc-CCCCEEEEECCCCEEEEEeCCCCEEEEecccCCCc---------------------cccccccccccccccc
Confidence 4568888 88999888888889999997755544321111000 0112234455555444
Q ss_pred CEEEEE-ECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe--ccC
Q psy4571 117 SLFGSV-ADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF--ESH 192 (437)
Q Consensus 117 ~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~--~~h 192 (437)
..+++. +.++.|..++.. ......+. ........+++.+++. ++++....+.+.+++... +. +..+ ..+
T Consensus 83 ~~~~~~~~~~~~i~~~~~~----g~~~~~~~~~~~~~p~~~avd~~G~-i~v~~~~~~~~~~~~~~g-~~-~~~~g~~~~ 155 (279)
T d1q7fa_ 83 DIIVTERSPTHQIQIYNQY----GQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-NV-LHKFGCSKH 155 (279)
T ss_dssp EEEEEECGGGCEEEEECTT----SCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CE-EEEEECTTT
T ss_pred ccceeccCCcccccccccc----ccceeecCCCcccccceeccccCCc-EEEEeeccceeeEeccCC-ce-eeccccccc
Confidence 444433 334566666654 33343432 3345678999999998 577777778888888764 32 4443 345
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe--cCccccEEEEEEccCCCeEEEEEe
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH--GGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
......+++.++++ ++++....+.|++||.... .+..+ .++.....+|++.|+|+ ++++-.
T Consensus 156 ~~~~~~i~~d~~g~-i~v~d~~~~~V~~~d~~G~---------------~~~~~g~~g~~~~P~giavD~~G~-i~Vad~ 218 (279)
T d1q7fa_ 156 LEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---------------YLRQIGGEGITNYPIGVGINSNGE-ILIADN 218 (279)
T ss_dssp CSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---------------EEEEESCTTTSCSEEEEEECTTCC-EEEEEC
T ss_pred ccccceeeecccee-EEeeeccccceeeeecCCc---------------eeeeecccccccCCcccccccCCe-EEEEEC
Confidence 56788999999986 6888888899999997652 22222 23445678999999998 666654
Q ss_pred -CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 271 -EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 271 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.++.|.+++. +++.+..+.... ....+..+++.|+|.++++. .+..
T Consensus 219 ~~~~~v~~f~~-~G~~~~~~~~~~-~~~~p~~vav~~dG~l~V~~-~n~~ 265 (279)
T d1q7fa_ 219 HNNFNLTIFTQ-DGQLISALESKV-KHAQCFDVALMDDGSVVLAS-KDYR 265 (279)
T ss_dssp SSSCEEEEECT-TSCEEEEEEESS-CCSCEEEEEEETTTEEEEEE-TTTE
T ss_pred CCCcEEEEECC-CCCEEEEEeCCC-CCCCEeEEEEeCCCcEEEEe-CCCe
Confidence 4567999985 466655554321 22345667899999876654 4565
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.84 E-value=1.8e-07 Score=82.91 Aligned_cols=204 Identities=7% Similarity=-0.007 Sum_probs=133.7
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
....+..++++| +++++++...+++|..++... + ...+......+.+++|+++|. ++++...++.+..++...
T Consensus 26 ~~~~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g----~-~~~~~~~~~~~~gla~~~dG~-l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 26 VNTFLENLASAP-DGTIFVTNHEVGEIVSITPDG----N-QQIHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVK 98 (302)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTC----C-EEEEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEEC
T ss_pred CCCCcCCEEECC-CCCEEEEeCCCCEEEEEeCCC----C-EEEEEcCCCCcceEEEcCCCC-eEEEecCCceEEEEEecc
Confidence 344577899999 678999988899988888652 2 334445667899999999998 688888888888888765
Q ss_pred CceeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 182 LKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 182 ~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.......+. ........+++.++++ ++++.+.++.+..+|................. ............+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~n~i~~~~~g~-~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ngi~~~ 173 (302)
T d2p4oa1 99 SDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR----SNSESVFPAANGLKRF 173 (302)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSC----SSTTCCSCSEEEEEEE
T ss_pred cccceeeccccCCccccceeEEccCCC-EEeeccccccceeeeccCCcceeEecCCccce----eeccCccccccccccc
Confidence 333222222 2345678999999997 68888888888888887643111000000000 0001112245666664
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+..++++.+.++.|..++.............. .....-.++++++|.++++...++.+
T Consensus 174 --~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V 231 (302)
T d2p4oa1 174 --GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSV 231 (302)
T ss_dssp --TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred --CCceeeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCCCEEEEEcCCCcE
Confidence 45578888899999999987765443332211 23345567999999988877666663
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=3.9e-06 Score=72.28 Aligned_cols=218 Identities=12% Similarity=0.017 Sum_probs=123.1
Q ss_pred CceeEEEecCCCCeEEEecCc----eEEEEEeeec---cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC
Q psy4571 67 PFLYDLVVNNYVANISCILNI----SILFFEIIFT---QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 139 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~~~~----~i~~~~~~~~---~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~ 139 (437)
+.+..-.|+|++..|+...+. .+.+.+.... +............|+|++..++.....++...++..... .
T Consensus 39 ~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~--~ 116 (269)
T d2hqsa1 39 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA--S 116 (269)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--T
T ss_pred CceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCeeeEeeecCCccceeecccc--c
Confidence 344556677777777543221 2333332211 122345567788999954444444444554444443321 1
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
.................+++++..++++...+|. |.+.++.... ...............|+|+++.++......+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 194 (269)
T d2hqsa1 117 GQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQ 194 (269)
T ss_dssp CCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred ccceeeeeccccccccccccccccceecccccCCceEeeeeccccc--ceeeecccccccccccccccceeEEEeecCCc
Confidence 2233333445555667788888876677766765 4455555533 44455566777888999999976666666666
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC--CCeEEEEeCCCCCCceeeeeeecc
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE--DNIMQEYCDSTDSDTKTMRLDSIR 295 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~ 295 (437)
..+|......... . ...+........|+|||+.++.+... ...|+++++..+...+ +.. .
T Consensus 195 ~~i~~~~~~~~~~-------------~-~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~-lt~---~ 256 (269)
T d2hqsa1 195 QHIAKQDLATGGV-------------Q-VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR-LPA---T 256 (269)
T ss_dssp EEEEEEETTTCCE-------------E-ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE-CCC---S
T ss_pred eeeeEeecccccc-------------e-EeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-EeC---C
Confidence 5555544332111 1 22334455678899999966655543 4568899998765432 221 1
Q ss_pred cCCceeeeecC
Q psy4571 296 SNGGISSTASP 306 (437)
Q Consensus 296 ~~~~~~~~~s~ 306 (437)
.......+|||
T Consensus 257 ~g~~~~p~WSP 267 (269)
T d2hqsa1 257 DGQVKFPAWSP 267 (269)
T ss_dssp SSEEEEEEECC
T ss_pred CCcEEeEEeCC
Confidence 22334457887
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.74 E-value=1.3e-06 Score=75.28 Aligned_cols=189 Identities=5% Similarity=0.018 Sum_probs=120.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
....+++++ ++.++++....+.+++++.. ....+... .......++++.+++. ++++-.....+..++......
T Consensus 58 ~p~gvav~~-~g~i~v~d~~~~~i~~~~~~---~~~~~~~~-~~~~~p~~iavd~~g~-i~v~d~~~~~~~~~~~~~~~~ 131 (260)
T d1rwia_ 58 QPQGLAVDG-AGTVYVTDFNNRVVTLAAGS---NNQTVLPF-DGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ 131 (260)
T ss_dssp SCCCEEECT-TCCEEEEETTTEEEEECTTC---SCCEECCC-CSCCSEEEEEECTTCC-EEEEEGGGTEEEEECTTCSSC
T ss_pred CceEEEEcC-CCCEEEeeeeeceeeeeeec---cceeeeee-eeeeecccccccccce-eEeecccccccccccccccee
Confidence 356788998 56777766666666655443 22222222 2234678999999987 577666677788888766333
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
......+ ......+++.|+++ ++++...++.|..+|......... ....-.....|++.++|.
T Consensus 132 ~~~~~~~-~~~p~~i~~~~~g~-~~v~~~~~~~i~~~d~~~~~~~~~--------------~~~~~~~p~gi~~d~~g~- 194 (260)
T d1rwia_ 132 TVLPFTG-LNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVL--------------PFTDITAPWGIAVDEAGT- 194 (260)
T ss_dssp EECCCCS-CCSCCEEEECTTCC-EEEEEGGGTEEEEECTTTCCEEEC--------------CCSSCCSEEEEEECTTCC-
T ss_pred eeeeecc-cCCcceeeecCCCC-Eeeeccccccccccccccceeeee--------------eccccCCCccceeeeeee-
Confidence 2222222 23457899999987 678878888999998876432111 123334568899999998
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
++++...++.|..++...... ..+.. .....+..++++++|.++++...++.
T Consensus 195 l~vsd~~~~~i~~~~~~~~~~-~~~~~--~~~~~P~~i~~d~~g~l~vad~~~~r 246 (260)
T d1rwia_ 195 VYVTEHNTNQVVKLLAGSTTS-TVLPF--TGLNTPLAVAVDSDRTVYVADRGNDR 246 (260)
T ss_dssp EEEEETTTTEEEEECTTCSCC-EECCC--CSCCCEEEEEECTTCCEEEEEGGGTE
T ss_pred eeeeecCCCEEEEEeCCCCeE-EEEcc--CCCCCeEEEEEeCCCCEEEEECCCCE
Confidence 888888888898888765422 22211 11234566788899887776544443
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.74 E-value=3.3e-06 Score=74.92 Aligned_cols=249 Identities=8% Similarity=0.011 Sum_probs=142.9
Q ss_pred ccccceeEEEEeeCCCcceEEEeec-------cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccC
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVI-------NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFP 103 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~-------d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~ 103 (437)
.....+....+|. ++++++++... ++.|..|+..++....... +... ...
T Consensus 14 ~~~~~g~EGpa~d-~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~-~~~~---------------------~~~ 70 (314)
T d1pjxa_ 14 TEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVN---------------------GYG 70 (314)
T ss_dssp ECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEET---------------------TEE
T ss_pred ecCCCCCeEeEEe-CCCCEEEEECccccccccCCEEEEEECCCCcEEEEEC-Cccc---------------------cCC
Confidence 3344455667888 88888776332 3445555555544332211 1000 001
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeC------------
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSA------------ 170 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~------------ 170 (437)
.....++|.+ +++.++++...+.|...+.+............+.. ...+.+++.++|. +.++-..
T Consensus 71 g~P~Gl~~~~-dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~-lyvtd~~~~~~~~~~~~~~ 148 (314)
T d1pjxa_ 71 GIPAGCQCDR-DANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECS-SSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTT
T ss_pred CcceeEEEeC-CCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCC-EEEecCccCccccccccee
Confidence 1245799999 56666667766778888876321000000111111 1357899999997 4555321
Q ss_pred ---CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCC----cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 171 ---DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE----TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 171 ---dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~----~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+|.|..++.+. + ...+...-...+.++|+|++. .++++-+..+.|..||+........ .+..
T Consensus 149 ~~~~G~v~~~~~dg-~--~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~--------~~~~ 217 (314)
T d1pjxa_ 149 QEKFGSIYCFTTDG-Q--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN--------KKVW 217 (314)
T ss_dssp SSSCEEEEEECTTS-C--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE--------EEEE
T ss_pred ccCCceEEEEeecC-c--eeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccce--------eeEE
Confidence 23454444432 2 222222233457899998764 4666777888999998765432211 0111
Q ss_pred EEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc-cccCCCCc
Q psy4571 244 FIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST-ASESPTPT 319 (437)
Q Consensus 244 ~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~s~s~d~~ 319 (437)
..+.+ +......+++.++|+ +.++....+.|.+||.+.++....+.. .......++|.|+++.| ++.+.++.
T Consensus 218 ~~~~~~~~~~pdGiavD~~Gn-lyVa~~~~g~I~~~dp~~g~~~~~i~~---p~~~~t~~afg~d~~~lyVt~~~~g~ 291 (314)
T d1pjxa_ 218 GHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIRC---PFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp EECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEEC---SSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred EEccccccccceeeEEecCCc-EEEEEcCCCEEEEEeCCCCEEEEEEEC---CCCCEEEEEEeCCCCEEEEEECCCCc
Confidence 22222 223457899999998 777877889999999998876666654 23456678999999744 55455554
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.72 E-value=6e-06 Score=73.34 Aligned_cols=239 Identities=8% Similarity=-0.010 Sum_probs=140.2
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
+...-++|. ++++++++-..++.|.-|+.+++........ .......+++++
T Consensus 40 ~~lEG~~~D-~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~--------------------------~~~~p~gla~~~- 91 (319)
T d2dg1a1 40 LQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVS--------------------------HKANPAAIKIHK- 91 (319)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEEC--------------------------SSSSEEEEEECT-
T ss_pred cCcEeCEEC-CCCCEEEEECCCCEEEEEECCCCeEEEEEeC--------------------------CCCCeeEEEECC-
Confidence 334567887 7788777776777666666555443332211 112356889999
Q ss_pred CCCEEEEEECC----CcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeC------CCeEEEEeCCCC
Q psy4571 115 HESLFGSVADD----QKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSA------DKTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~------dg~i~lwd~~~~ 182 (437)
+++++++...+ +.+...+... ........ .-....+.+++.++|. +.++... .+.+..++....
T Consensus 92 dG~l~va~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~nd~~~d~~G~-l~vtd~~~~~~~~~g~v~~~~~dg~ 167 (319)
T d2dg1a1 92 DGRLFVCYLGDFKSTGGIFAATENG---DNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR 167 (319)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTS---CSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSC
T ss_pred CCCEEEEecCCCccceeEEEEcCCC---ceeeeeccCCCcccCCcceeEEeccc-eeecccccccccCcceeEEEecccc
Confidence 56777655332 2344444442 22222221 1134578899999997 4555332 233555555432
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. +..+...-...+.++|+|+++.++++-+..+.|..|++.......... ................+++.++|
T Consensus 168 ~--~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~------~~~~~~~~~~~~~PdGl~vD~~G 239 (319)
T d2dg1a1 168 T--VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF------GATIPYYFTGHEGPDSCCIDSDD 239 (319)
T ss_dssp C--EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE------EEEEEEECCSSSEEEEEEEBTTC
T ss_pred e--eEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccc------cceeeeccCCccceeeeeEcCCC
Confidence 2 233222234467899999998767777888999999987543211100 00011111212335789999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc---cCCceeeeecCCCCcccccC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR---SNGGISSTASPTASSTASES 315 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~l~s~s 315 (437)
+ +.++...++.|.++|. .++.+..+...... .....++++.|++..+...+
T Consensus 240 ~-l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 240 N-LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp C-EEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred C-EEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence 8 8888888999999996 57777777654321 22345668888776665543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.69 E-value=1.6e-06 Score=77.13 Aligned_cols=223 Identities=8% Similarity=-0.015 Sum_probs=134.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC----CCeEEEEeCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA----DKTVALWDLR 180 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~----dg~i~lwd~~ 180 (437)
....++|.+ +++++++-...+.|..|+.+. ................++++++|. ++++... .+.+...+..
T Consensus 41 ~lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g---~~~~~~~~~~~~~p~gla~~~dG~-l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 41 QLEGLNFDR-QGQLFLLDVFEGNIFKINPET---KEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp CEEEEEECT-TSCEEEEETTTCEEEEECTTT---CCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTT
T ss_pred CcEeCEECC-CCCEEEEECCCCEEEEEECCC---CeEEEEEeCCCCCeeEEEECCCCC-EEEEecCCCccceeEEEEcCC
Confidence 346899998 567887777889999898873 233333444556789999999998 4665433 2345555555
Q ss_pred CCceeeeEeccC---CCceEEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 181 NLKLKLHSFESH---KDEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 181 ~~~~~~~~~~~h---~~~v~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
.... .....+ ......+++.|+|+ +.++.... +.+..++..... +......-.
T Consensus 116 ~~~~--~~~~~~~~~~~~~nd~~~d~~G~-l~vtd~~~~~~~~~g~v~~~~~dg~~---------------~~~~~~~~~ 177 (319)
T d2dg1a1 116 GDNL--QDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT---------------VTPIIQNIS 177 (319)
T ss_dssp SCSC--EEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC---------------EEEEEEEES
T ss_pred Ccee--eeeccCCCcccCCcceeEEeccc-eeecccccccccCcceeEEEecccce---------------eEEEeeccc
Confidence 4332 222212 23478899999997 55553221 224444333211 111112223
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce-eeee----eecccCCceeeeecCCCCcccccCCCCcccccccc
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK-TMRL----DSIRSNGGISSTASPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~----~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
..+.|+|+|+++.+.++-+..+.|..|++....... .... .......+-.+++.++|++.++....+.
T Consensus 178 ~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~------- 250 (319)
T d2dg1a1 178 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR------- 250 (319)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-------
T ss_pred eeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCE-------
Confidence 467899999998677787889999999987543222 1111 1111123445688899998887766666
Q ss_pred cccccccccchhhhhhhhhc------CCCccccccCCCCCCc
Q psy4571 327 YWQGLVLFDILVCEEQRQLL------GTEEESSDRHSSDNDT 362 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~~------~h~~~~~~~~~~~~~~ 362 (437)
|.++| ..|+.+..+. ++...+.+..+.+++.
T Consensus 251 ----V~~~~-p~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~ 287 (319)
T d2dg1a1 251 ----VLVFN-KRGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 287 (319)
T ss_dssp ----EEEEC-TTSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred ----EEEEC-CCCcEEEEEeCCCcCCCcCceeeeEEEeCCCC
Confidence 66666 3566655442 3444556666666554
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.65 E-value=4e-07 Score=78.65 Aligned_cols=191 Identities=9% Similarity=0.052 Sum_probs=117.5
Q ss_pred CCCcceEEeeCCCCCEEEEE-ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSV-ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.....++++++ +++++++. +..+.+..++.... ........+ ......+++++++. ++++....+.+++++..+
T Consensus 13 ~~~P~~vavd~-dG~i~v~~~~~~~~i~~~~~~~~--~~~~~~~~~-~~~p~gvav~~~g~-i~v~d~~~~~i~~~~~~~ 87 (260)
T d1rwia_ 13 RLSPSGVAVDS-AGNVYVTSEGMYGRVVKLATGST--GTTVLPFNG-LYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSN 87 (260)
T ss_dssp CCCEEEEEECT-TCCEEEEECSSSCEEEEEC------CEEECCCCS-CCSCCCEEECTTCC-EEEEETTTEEEEECTTCS
T ss_pred cCCCCEEEEcC-CCCEEEEEcCCCCEEEEEcCCCc--eEEEeccCC-ccCceEEEEcCCCC-EEEeeeeeceeeeeeecc
Confidence 34568999999 56665554 45577777766532 111111212 23457889999987 577776677777666554
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
... +.... .......+++.++++ ++++-..+..+..++......... ...+ .....++++.|+
T Consensus 88 ~~~-~~~~~-~~~~p~~iavd~~g~-i~v~d~~~~~~~~~~~~~~~~~~~-------------~~~~-~~~p~~i~~~~~ 150 (260)
T d1rwia_ 88 NQT-VLPFD-GLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVL-------------PFTG-LNDPDGVAVDNS 150 (260)
T ss_dssp CCE-ECCCC-SCCSEEEEEECTTCC-EEEEEGGGTEEEEECTTCSSCEEC-------------CCCS-CCSCCEEEECTT
T ss_pred cee-eeeee-eeeecccccccccce-eEeeccccccccccccccceeeee-------------eecc-cCCcceeeecCC
Confidence 332 22222 234578999999987 566666667777777655322111 0111 234468999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+. ++++...++.|..+|....... .+. ......+..+++.++|.++++....+.
T Consensus 151 g~-~~v~~~~~~~i~~~d~~~~~~~-~~~--~~~~~~p~gi~~d~~g~l~vsd~~~~~ 204 (260)
T d1rwia_ 151 GN-VYVTDTDNNRVVKLEAESNNQV-VLP--FTDITAPWGIAVDEAGTVYVTEHNTNQ 204 (260)
T ss_dssp CC-EEEEEGGGTEEEEECTTTCCEE-ECC--CSSCCSEEEEEECTTCCEEEEETTTTE
T ss_pred CC-Eeeeccccccccccccccceee-eee--ccccCCCccceeeeeeeeeeeecCCCE
Confidence 98 7888888899999998764322 111 112344566788999998888876665
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.48 E-value=1.9e-05 Score=69.82 Aligned_cols=157 Identities=11% Similarity=0.137 Sum_probs=101.3
Q ss_pred CcceEEeeCCCCCEEEEEEC---------------CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC----cEE
Q psy4571 105 SRQDVAWHLLHESLFGSVAD---------------DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE----YIL 165 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~---------------dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~----~~l 165 (437)
..+++++.| ++++.++-.. .|.|..++.+ .+.. .+...-...+.++|+|++. +++
T Consensus 118 ~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d----g~~~-~~~~~~~~pNGi~~~~d~d~~~~~ly 191 (314)
T d1pjxa_ 118 GCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp CCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SCEE-EEEEEESSEEEEEEEECTTSCEEEEE
T ss_pred CCcEEEECC-CCCEEEecCccCcccccccceeccCCceEEEEeec----Ccee-EeeCCcceeeeeEECCCCCcceeEEE
Confidence 467899999 5666665321 2334444432 2222 2222233457899998764 456
Q ss_pred EEEeCCCeEEEEeCCCCceee-----eEecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 166 ATGSADKTVALWDLRNLKLKL-----HSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~-----~~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
++-+..+.|..+|+....... ..+.. .....-.+++.++|+ ++++....+.|.+||.+.+....
T Consensus 192 v~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~Gn-lyVa~~~~g~I~~~dp~~g~~~~--------- 261 (314)
T d1pjxa_ 192 VAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKM--------- 261 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSE---------
T ss_pred EEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCc-EEEEEcCCCEEEEEeCCCCEEEE---------
Confidence 666788999999876533211 11111 123356799999997 67777778999999987654322
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.........++++|.|+++.++++.+.+|.|...++..
T Consensus 262 -----~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 262 -----RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp -----EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred -----EEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 23333456889999999987888888899988888754
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.5e-05 Score=74.62 Aligned_cols=203 Identities=10% Similarity=0.053 Sum_probs=110.1
Q ss_pred CcceEEeeCCCCCEEEEEE---------CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 105 SRQDVAWHLLHESLFGSVA---------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
.+....||| +++.++... ..+.+.++|+.++. ...+.........+....|||+|+. +|-.. ++.|.
T Consensus 62 ~~~~~~~Sp-D~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~-~~~l~~~~~~~~~l~~~~wSPDG~~-iafv~-~~nl~ 137 (465)
T d1xfda1 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGD-PQSLDPPEVSNAKLQYAGWGPKGQQ-LIFIF-ENNIY 137 (465)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCC-CEECCCTTCCSCCCSBCCBCSSTTC-EEEEE-TTEEE
T ss_pred ccceeEECC-CCCeEEEEEcccceeEeeccccEEEEEccCCc-eeeccCccCCccccceeeeccCCce-EEEEe-cceEE
Confidence 566788999 566665553 35678999998542 2222222233445667899999998 55443 67888
Q ss_pred EEeCCCCceeeeEeccCCCce-----------------EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCC--CCC---
Q psy4571 176 LWDLRNLKLKLHSFESHKDEI-----------------FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ--STE--- 233 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~--- 233 (437)
+.+..++.....+..+..+.| ..+.|||||+++++.--.+..|..+.+....... ...
T Consensus 138 ~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~ 217 (465)
T d1xfda1 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (465)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee
Confidence 888876543222222221212 4678999999754444455556666554321110 000
Q ss_pred --CCCC-CCCceEEEe-----------------cCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCCceeee
Q psy4571 234 --DAED-GPPELLFIH-----------------GGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 234 --~~~~-~~~~~~~~~-----------------~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~ 290 (437)
.... .+...+..+ .....-+..+.|+|+++.++.....+ ..+.++|..++++...+.
T Consensus 218 Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~ 297 (465)
T d1xfda1 218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (465)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred ccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEE
Confidence 0000 010111111 11122467899999998333333333 368889999987654433
Q ss_pred eeecc--cCCceeeeecCCCCcc
Q psy4571 291 LDSIR--SNGGISSTASPTASST 311 (437)
Q Consensus 291 ~~~~~--~~~~~~~~~s~~g~~l 311 (437)
..... ........|+|||+.+
T Consensus 298 e~~~~wv~~~~~~p~~~~dg~~~ 320 (465)
T d1xfda1 298 DESEAWLHRQNEEPVFSKDGRKF 320 (465)
T ss_dssp EECSSCCCCCCCCCEECTTSCSE
T ss_pred EcCCceEeccCCceeEccCCCee
Confidence 21100 0012234789999854
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.41 E-value=0.00032 Score=60.95 Aligned_cols=195 Identities=12% Similarity=0.101 Sum_probs=121.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeC----CCeE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSA----DKTV 174 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~----dg~i 174 (437)
..+..+.++++.+ ++.+++ ++.+| +.++|..++.. +.+..... ....++.+.+.|+|.. .++... .+.-
T Consensus 56 ~~~~~~~~i~~~~-dg~l~v-a~~~g-l~~~d~~tg~~-~~l~~~~~~~~~~~~nd~~vd~~G~i-w~~~~~~~~~~~~g 130 (295)
T d2ghsa1 56 ALPFMGSALAKIS-DSKQLI-ASDDG-LFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRKAETGAG 130 (295)
T ss_dssp ECSSCEEEEEEEE-TTEEEE-EETTE-EEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETTCCTTCE
T ss_pred ECCCCcEEEEEec-CCCEEE-EEeCc-cEEeeccccee-eEEeeeecCCCcccceeeEECCCCCE-EEEeccccccccce
Confidence 3556778899988 455554 45554 88899884321 11111111 1235889999999983 444322 2334
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.+|.+..++. .... ..-...+.++|+|+++.++++.+..+.|..+++........ ..........+......
T Consensus 131 ~l~~~~~g~~-~~~~-~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~------~~~~~~~~~~~~~g~pd 202 (295)
T d2ghsa1 131 SIYHVAKGKV-TKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT------GKAEVFIDSTGIKGGMD 202 (295)
T ss_dssp EEEEEETTEE-EEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS------SCCEEEEECTTSSSEEE
T ss_pred eEeeecCCcE-EEEe-eccCCcceeeecCCCceEEEeecccceeeEeeecccccccc------cceEEEeccCccccccc
Confidence 5666555432 2222 22344678999999998778888889999999864332211 01122233344456678
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTAS 313 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s 313 (437)
.+++..+|+ +.++.-..+.|..||. .++.+..+... ...+.+++|- ||.+.|..
T Consensus 203 G~~vD~~Gn-lWva~~~~g~V~~~dp-~G~~~~~i~lP---~~~~T~~~FGG~d~~~Lyv 257 (295)
T d2ghsa1 203 GSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARYEVP---GKQTTCPAFIGPDASRLLV 257 (295)
T ss_dssp EEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEEECS---CSBEEEEEEESTTSCEEEE
T ss_pred ceEEcCCCC-EEeeeeCCCceEEecC-CCcEeeEecCC---CCceEEEEEeCCCCCEEEE
Confidence 899999998 7767667889999995 57777777653 2346677884 67665543
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.38 E-value=7.5e-05 Score=69.72 Aligned_cols=273 Identities=8% Similarity=-0.007 Sum_probs=140.4
Q ss_pred cccceeEEEEeeCCCcceEEEee---------ccCceEeeecCCCc-------------eeEEEecCCCCeEEEecCceE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERV---------INEEYKIWKKNTPF-------------LYDLVVNNYVANISCILNISI 89 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs---------~d~~v~iw~~~~~~-------------~~~~~~~~~~~~i~~~~~~~i 89 (437)
+..+.+....|+ |+++.++... ..+.+-+++..++. +....|+|++..++...++.+
T Consensus 58 ~~~~~~~~~~~S-pD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl 136 (465)
T d1xfda1 58 IESLRAIRYEIS-PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNI 136 (465)
T ss_dssp TTTTTCSEEEEC-TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEE
T ss_pred ccccccceeEEC-CCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecceE
Confidence 344566777888 9998877653 23445555643322 223557888889988888888
Q ss_pred EEEEeeecccccc----------------------CCCcceEEeeCCCCCEEEEEE-CCCcEE-----------------
Q psy4571 90 LFFEIIFTQNFPF----------------------PLSRQDVAWHLLHESLFGSVA-DDQKLM----------------- 129 (437)
Q Consensus 90 ~~~~~~~~~~~~~----------------------~~~v~~~~~sp~~~~~l~~~~-~dg~v~----------------- 129 (437)
.+.+...+..... ...-..+-||| ++..||... .+..|.
T Consensus 137 ~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSP-Dgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~ 215 (465)
T d1xfda1 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (465)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECC-CCCeEEEEEecccccceeecccccccccceeee
Confidence 8776433221111 11224678999 566666553 233333
Q ss_pred ----------------EEEcCCCCCCCC---eeeeccCCCCeEEEEEeCCCCcEEEEEeCC---CeEEEEeCCCCceeee
Q psy4571 130 ----------------IWDTRSHNVSKP---SHTVDAHTAEVNCLSFNPYSEYILATGSAD---KTVALWDLRNLKLKLH 187 (437)
Q Consensus 130 ----------------vwd~~~~~~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g~i~lwd~~~~~~~~~ 187 (437)
++|+........ .........-+..+.|+|+++.++.....+ ..|.++|..+++...
T Consensus 216 ~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~- 294 (465)
T d1xfda1 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK- 294 (465)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE-
T ss_pred eeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEE-
Confidence 333332110000 000011122367889999987433333333 258889999876532
Q ss_pred Eecc-CCCc----eEEEEEcCCCCcEEEE-Ee-CCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE-E
Q psy4571 188 SFES-HKDE----IFQVQWSPHNETILAS-SG-TDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF-S 257 (437)
Q Consensus 188 ~~~~-h~~~----v~~v~~~p~~~~~l~s-g~-~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-~ 257 (437)
.+.. ..+. -....|+|+|+.++.. .+ .+| .+...++........ ...+..+....-.|..+ .
T Consensus 295 ~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~--------~~~~~~LT~G~w~V~~i~~ 366 (465)
T d1xfda1 295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS--------NDNIQSITSGDWDVTKILA 366 (465)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS--------SCCCCBSCCSSSCEEEEEE
T ss_pred EEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCC--------CceeEEeccCCceEEEEEE
Confidence 2222 2221 1346789999864322 22 333 233333322111000 00011122223345554 6
Q ss_pred EccCCCeEEEEEeCCC----eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 258 WNPNEPWVICSVSEDN----IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
|.++++.+..++..++ .++--++..+...+.+........+...+.|||+|++++...
T Consensus 367 ~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~ 428 (465)
T d1xfda1 367 YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (465)
T ss_dssp EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEe
Confidence 8888886666665432 244445554433333322222344667889999999988443
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.28 E-value=0.00049 Score=59.21 Aligned_cols=156 Identities=15% Similarity=0.155 Sum_probs=108.3
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee--ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
.....+++.+ ++.++++....+.+.+++.. ...+..+ ..+......+++.+++. ++++....+.|+++|...
T Consensus 114 ~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~----g~~~~~~g~~~~~~~~~~i~~d~~g~-i~v~d~~~~~V~~~d~~G 187 (279)
T d1q7fa_ 114 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEG 187 (279)
T ss_dssp SCEEEEEECT-TSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTC
T ss_pred cccceecccc-CCcEEEEeeccceeeEeccC----Cceeecccccccccccceeeecccee-EEeeeccccceeeeecCC
Confidence 3456888888 56777777777778888765 3444443 34556788999999887 688888899999999865
Q ss_pred CceeeeEec--cCCCceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe--cCccccEEEE
Q psy4571 182 LKLKLHSFE--SHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH--GGHTAKISDF 256 (437)
Q Consensus 182 ~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l 256 (437)
+. +..+. +.......+++.|+|+ ++++-.. ++.|.+|+... + .+..+ .........|
T Consensus 188 -~~-~~~~g~~g~~~~P~giavD~~G~-i~Vad~~~~~~v~~f~~~G-~--------------~~~~~~~~~~~~~p~~v 249 (279)
T d1q7fa_ 188 -QY-LRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG-Q--------------LISALESKVKHAQCFDV 249 (279)
T ss_dssp -CE-EEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS-C--------------EEEEEEESSCCSCEEEE
T ss_pred -ce-eeeecccccccCCcccccccCCe-EEEEECCCCcEEEEECCCC-C--------------EEEEEeCCCCCCCEeEE
Confidence 33 44442 3445578999999997 6666543 45799998543 2 22222 2222357889
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
++.|+|. +++ ++.++.|++|......+
T Consensus 250 av~~dG~-l~V-~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 250 ALMDDGS-VVL-ASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp EEETTTE-EEE-EETTTEEEEEECSCCCC
T ss_pred EEeCCCc-EEE-EeCCCeEEEEEeeeecC
Confidence 9999997 554 45789999999887643
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.09 E-value=0.00033 Score=60.91 Aligned_cols=220 Identities=10% Similarity=-0.017 Sum_probs=130.0
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
....|++.++.++.+=-..+.|..||+.++ + ...+ .....+.++++.++|. |+.++.+ -|.++|..+++...
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g---~-~~~~-~~~~~~~~i~~~~dg~--l~va~~~-gl~~~d~~tg~~~~ 92 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASG---R-KTVH-ALPFMGSALAKISDSK--QLIASDD-GLFLRDTATGVLTL 92 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTT---E-EEEE-ECSSCEEEEEEEETTE--EEEEETT-EEEEEETTTCCEEE
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCC---e-EEEE-ECCCCcEEEEEecCCC--EEEEEeC-ccEEeecccceeeE
Confidence 356788866666665556788999998843 2 2222 2355789999999887 3445555 58899999866422
Q ss_pred eE-ecc--CCCceEEEEEcCCCCcEEEEEeC----CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 187 HS-FES--HKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 187 ~~-~~~--h~~~v~~v~~~p~~~~~l~sg~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.. ... ....++.+.+.|+|+ +.++... .+.-.+|.+..++. ......-...+.++|+
T Consensus 93 l~~~~~~~~~~~~nd~~vd~~G~-iw~~~~~~~~~~~~g~l~~~~~g~~---------------~~~~~~~~~~Ng~~~s 156 (295)
T d2ghsa1 93 HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVAKGKV---------------TKLFADISIPNSICFS 156 (295)
T ss_dssp EECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEETTEE---------------EEEEEEESSEEEEEEC
T ss_pred EeeeecCCCcccceeeEECCCCC-EEEEeccccccccceeEeeecCCcE---------------EEEeeccCCcceeeec
Confidence 11 111 123578999999998 3444321 22345555544321 1111222345789999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCc--e--eeeee-ecccCCceeeeecCCCCcccccCCCCcccccccccccccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDT--K--TMRLD-SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLF 334 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~--~--~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~w 334 (437)
++++.++++-+..+.|..+++...... . ..... .......-.+++..+|.+.++.-..+. |..+
T Consensus 157 ~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~-----------V~~~ 225 (295)
T d2ghsa1 157 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-----------VDRY 225 (295)
T ss_dssp TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-----------EEEE
T ss_pred CCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCc-----------eEEe
Confidence 999977888888999999987532211 1 11111 112223445677888887776544444 6677
Q ss_pred cchhhhhhhhhcCCCccccccCC-CCCCc
Q psy4571 335 DILVCEEQRQLLGTEEESSDRHS-SDNDT 362 (437)
Q Consensus 335 d~~~~~~~~~~~~h~~~~~~~~~-~~~~~ 362 (437)
| ..|+.+..+.--...+++++| -++.+
T Consensus 226 d-p~G~~~~~i~lP~~~~T~~~FGG~d~~ 253 (295)
T d2ghsa1 226 D-TDGNHIARYEVPGKQTTCPAFIGPDAS 253 (295)
T ss_dssp C-TTCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred c-CCCcEeeEecCCCCceEEEEEeCCCCC
Confidence 7 467776666443334555554 35544
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.91 E-value=0.0022 Score=54.40 Aligned_cols=206 Identities=6% Similarity=0.053 Sum_probs=121.8
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
+..++|.+.++.++.+-..++.|+..++... .....+......+.++++...+..+..+-...+.|.+.+++....
T Consensus 38 ~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~---~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~- 113 (263)
T d1npea_ 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR- 113 (263)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred EEEEEEEeCCCEEEEEECCCCeEEEEEcccC---CcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceE-
Confidence 4578888855555555556788888888732 233333333457899999987776556666788999999986443
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCe--EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.............+++.|...+++.+-...+. |.--++..... ..+ ....-....+|++.+.++
T Consensus 114 ~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~------------~~i--~~~~~~~P~glaiD~~~~ 179 (263)
T d1npea_ 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR------------RIL--AQDNLGLPNGLTFDAFSS 179 (263)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC------------EEE--ECTTCSCEEEEEEETTTT
T ss_pred EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc------------eee--eeecccccceEEEeecCc
Confidence 22233334568899999988766655433333 44344443221 111 122234568999998888
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
.+..+-...+.|...|+...... .+. .. ...+..+++. ++.+..+-...+. |...|..+|+.+.
T Consensus 180 ~lYw~d~~~~~I~~~~~~g~~~~-~v~-~~--~~~P~~lav~-~~~lYwtd~~~~~-----------I~~~~~~~g~~~~ 243 (263)
T d1npea_ 180 QLCWVDAGTHRAECLNPAQPGRR-KVL-EG--LQYPFAVTSY-GKNLYYTDWKTNS-----------VIAMDLAISKEMD 243 (263)
T ss_dssp EEEEEETTTTEEEEEETTEEEEE-EEE-EC--CCSEEEEEEE-TTEEEEEETTTTE-----------EEEEETTTTEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCeE-EEE-CC--CCCcEEEEEE-CCEEEEEECCCCE-----------EEEEECCCCccce
Confidence 56666667889999998764332 221 11 1123344443 2333333333333 5666777777655
Q ss_pred hh
Q psy4571 344 QL 345 (437)
Q Consensus 344 ~~ 345 (437)
.+
T Consensus 244 ~~ 245 (263)
T d1npea_ 244 TF 245 (263)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=0.0052 Score=52.04 Aligned_cols=166 Identities=8% Similarity=-0.025 Sum_probs=103.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC-CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
.+..++|++..+.++.+=...+.|..-++....... ...........+..+++.+.+..+..+-...+.|.+.+++...
T Consensus 31 ~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~ 110 (266)
T d1ijqa1 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (266)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCCce
Confidence 456788988545455444456677766665321111 2222223334577899998888766666778899999998754
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. .............++++|...+++.+.. ..+.|.-.++...... ......-....++++.+.+
T Consensus 111 ~-~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~--------------~l~~~~~~~p~gl~iD~~~ 175 (266)
T d1ijqa1 111 R-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--------------SLVTENIQWPNGITLDLLS 175 (266)
T ss_dssp E-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--------------EEECSSCSCEEEEEEETTT
T ss_pred E-EEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee--------------cccccccceeeEEEeeccc
Confidence 3 3334444566789999997766565542 3446666666553211 1122223457899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
+.+..+-...+.|...++.....
T Consensus 176 ~~lYw~d~~~~~I~~~~~dG~~~ 198 (266)
T d1ijqa1 176 GRLYWVDSKLHSISSIDVNGGNR 198 (266)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEecCCcCEEEEEECCCCCE
Confidence 86777767788999999976543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.86 E-value=0.00021 Score=61.16 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=58.4
Q ss_pred EeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCc
Q psy4571 110 AWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLK 183 (437)
Q Consensus 110 ~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~ 183 (437)
..+|+ .++.++-.+ +|.|.+.|+..+ + ...+..+.+.+...+|||||+++..+...++ .|.+.+..+++
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g---~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSG---S-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 79 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTC---C-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCC---C-EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence 45674 045555443 567888898832 2 3455566778899999999998554544332 37777777654
Q ss_pred eeeeEeccC-------CCceEEEEEcCCCCcEEE
Q psy4571 184 LKLHSFESH-------KDEIFQVQWSPHNETILA 210 (437)
Q Consensus 184 ~~~~~~~~h-------~~~v~~v~~~p~~~~~l~ 210 (437)
. ..+..+ .......+|+|+|+.++.
T Consensus 80 ~--~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~ 111 (281)
T d1k32a2 80 I--KRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 111 (281)
T ss_dssp E--EECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred e--EEeeecCCCccCccccccccccCCCCCEEEE
Confidence 3 222211 224567889999986433
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.058 Score=45.16 Aligned_cols=164 Identities=7% Similarity=0.005 Sum_probs=102.7
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT--VALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~lwd~~~~ 182 (437)
.+.++++...++.++.+-...+.|.+.++... ............+..++.+|...+++.+-...+. |.--+++..
T Consensus 80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~---~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~ 156 (263)
T d1npea_ 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (263)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred cccEEEEeccCCeEEEeccCCCEEEEEecCCc---eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCC
Confidence 45688888756666666667789999998732 2222222334578999999988865555433233 444456543
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....+++.+.++.+..+-...+.|...++..... +.+ ..+-. ...+|++. +
T Consensus 157 ~~-~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~------------~~v--~~~~~-~P~~lav~--~ 218 (263)
T d1npea_ 157 NR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR------------RKV--LEGLQ-YPFAVTSY--G 218 (263)
T ss_dssp CC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE------------EEE--EECCC-SEEEEEEE--T
T ss_pred Cc-eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe------------EEE--ECCCC-CcEEEEEE--C
Confidence 32 2222223345689999988876666666778899999876432 111 22222 23567764 4
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.++..+-..++.|...|..+++....+
T Consensus 219 ~~lYwtd~~~~~I~~~~~~~g~~~~~~ 245 (263)
T d1npea_ 219 KNLYYTDWKTNSVIAMDLAISKEMDTF 245 (263)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCccceEE
Confidence 546777667889999999888665444
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.04 E-value=0.0034 Score=55.99 Aligned_cols=206 Identities=7% Similarity=0.037 Sum_probs=111.6
Q ss_pred CCEEEE-EECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEe--CCCCcEEEEEeCC------------------Ce
Q psy4571 116 ESLFGS-VADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFN--PYSEYILATGSAD------------------KT 173 (437)
Q Consensus 116 ~~~l~~-~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~~l~sgs~d------------------g~ 173 (437)
++++++ -..++.|.+.|+++ .+...... .....+..+... |...| ++.++++ +.
T Consensus 99 GrylFVNDkan~RVAvIdl~~---fkt~kIi~iPn~~~~HG~r~~~~p~T~Y-V~~~~e~~vP~pndg~~l~d~~~y~~~ 174 (459)
T d1fwxa2 99 GRFLFMNDKANTRVARVRCDV---MKCDAILEIPNAKGIHGLRPQKWPRSNY-VFCNGEDETPLVNDGTNMEDVANYVNV 174 (459)
T ss_dssp EEEEEEEETTTTEEEEEETTT---TEEEEEEECSSCCSEEEEEECCSSBCSE-EEEEECSCEESSCSSSSTTCGG-EEEE
T ss_pred eeEEEEEcCCCceEEEEECcc---eeeeEEEecCCCCCCceeecccCCCeEE-EEccCccccccCCCCccccchhhcceE
Confidence 445444 44678999999984 33322221 223345666654 44555 5555542 33
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--------------eEEEEEcCCCCC-----------
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--------------RLHVWDLSKIGE----------- 228 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--------------~i~vwd~~~~~~----------- 228 (437)
+...|..+++. ..... -.+....++++|+|+++++++-... .+.+++......
T Consensus 175 ~t~ID~~tm~V-~~QV~-V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ein 252 (459)
T d1fwxa2 175 FTAVDADKWEV-AWQVL-VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 252 (459)
T ss_dssp EEEEETTTTEE-EEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEEEecCCceE-EEEee-eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeC
Confidence 67789888665 33332 2345668999999997665552211 133444321100
Q ss_pred -CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC--------CCceeeeeeecccCCc
Q psy4571 229 -EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD--------SDTKTMRLDSIRSNGG 299 (437)
Q Consensus 229 -~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~~ 299 (437)
...+..........++.... ......+..+|||+++++++..+.++.++|++.- .....+........++
T Consensus 253 gV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgP 331 (459)
T d1fwxa2 253 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 331 (459)
T ss_dssp TEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCE
T ss_pred CceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCc
Confidence 00000000000111111111 1224568999999999999999999999999632 2222232333334567
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
...+|...|....+---|.. +.-|++...
T Consensus 332 Lht~fd~~g~aytslfids~-----------v~kw~~~~~ 360 (459)
T d1fwxa2 332 LHTAFDGRGNAYTSLFLDSQ-----------VVKWNIEDA 360 (459)
T ss_dssp EEEEECTTSEEEEEETTTTE-----------EEEEEHHHH
T ss_pred cccccCCCceEEEEeeccce-----------EEEEecchh
Confidence 77788888865444444545 677887544
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.94 E-value=0.046 Score=48.39 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=68.5
Q ss_pred EeeCCCCCEEEEEECCC-----------cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEE
Q psy4571 110 AWHLLHESLFGSVADDQ-----------KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALW 177 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg-----------~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lw 177 (437)
+.-+.++++++.|+.+. .+.+||+.++.-.........|.......++.+++. +++.|+.+ ..+.+|
T Consensus 25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-i~v~Gg~~~~~~~~y 103 (387)
T d1k3ia3 25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLY 103 (387)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEE
T ss_pred EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCc-EEEeecCCCcceeEe
Confidence 44444677777777421 367899986532222222223333345667889998 57777654 579999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
|..+..............-...+..++|+ +++.|+.+ ..+.+||..+..
T Consensus 104 d~~~~~w~~~~~~~~~r~~~~~~~~~dG~-v~v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 104 DSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred cCccCcccccccccccccccceeeecCCc-eeeeccccccccccceeeeecCCCCc
Confidence 99875431111111112234567778887 57777643 358999987753
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.93 E-value=0.087 Score=44.25 Aligned_cols=207 Identities=13% Similarity=0.180 Sum_probs=133.9
Q ss_pred EEecCCCCeEEEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h 148 (437)
..++|...-++.-....+.+|++...+++ .++..|.--.|-. .+.|+..+ +..|+-|+++.. ..+.+.+..|
T Consensus 68 AIMhP~~~IiALrag~~LQiFnletK~klks~~~~e~VvfWkWis--~~~L~lVT-~taVYHW~~~g~--s~P~k~fdR~ 142 (327)
T d1utca2 68 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGE--SQPVKMFDRH 142 (327)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEESS--SSEEEEEC-SSEEEEEESSSS--CCCEEEEECC
T ss_pred hhcCCCCcEEEEecCCeEEEEehhHhhhhceEEcCCCcEEEEecC--CCEEEEEc-CCceEEEcccCC--CCchhhhhhc
Confidence 34566666565556678999998765544 4677777777753 56776665 457999999642 3577777666
Q ss_pred C----CCeEEEEEeCCCCcEEEEEeC------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCC--CCcEEEEEe---
Q psy4571 149 T----AEVNCLSFNPYSEYILATGSA------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH--NETILASSG--- 213 (437)
Q Consensus 149 ~----~~v~~l~~~~~~~~~l~sgs~------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~--- 213 (437)
. ..|..-..++++++++++|=. .|.+.||..+... -+.+++|.+.-..+.+..+ ...+++-+.
T Consensus 143 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 220 (327)
T d1utca2 143 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 220 (327)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred ccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc--CccccceeeeeEEEEcCCCCCCceEEEEEECCC
Confidence 4 367778888999986666632 4778999998633 5677888665555444321 122444332
Q ss_pred CCCeEEEEEcCCCCCCCCCCCCCCCCCceEE---EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLF---IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
..++++|-++......... -+.+.+- ......+...++..++... ++..-+.-|.+++||++++.++..-+
T Consensus 221 ~~~kLhIiEig~~~~g~~~-----f~kk~vdi~fppea~~DFPvamqvs~kyg-iiyviTK~G~i~lyDleTgt~i~~nR 294 (327)
T d1utca2 221 AGGKLHIIEVGTPPTGNQP-----FPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNR 294 (327)
T ss_dssp TEEEEEEEECSCCCTTCCC-----CCCEEEECCCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEEEcCCCccCCCC-----CcceeEEEECCccccCCcEEEEEeeccCC-EEEEEecCcEEEEEEcccccEEEEee
Confidence 2367999998764221110 0011111 1223345667888888887 78888999999999999998876555
Q ss_pred e
Q psy4571 291 L 291 (437)
Q Consensus 291 ~ 291 (437)
.
T Consensus 295 I 295 (327)
T d1utca2 295 I 295 (327)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.1 Score=43.60 Aligned_cols=169 Identities=9% Similarity=0.041 Sum_probs=110.5
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~ 182 (437)
..+..+++.+.+++++.+-...+.|.+.++.. ................++.+|...+++.+.. ..+.|.-.++...
T Consensus 77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g---~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs 153 (266)
T d1ijqa1 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (266)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS---SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceEEEeeccceEEEEecCCCEEEeEecCC---ceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCC
Confidence 34668899887777777777778999999873 2223334444567899999998776555542 3456777777653
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....+++.+.++.+..+-...+.|...++..... ..+...........+|++. +
T Consensus 154 ~~-~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~------------~~~~~~~~~~~~p~~lav~--~ 218 (266)
T d1ijqa1 154 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF--E 218 (266)
T ss_dssp CE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE--T
T ss_pred ce-ecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE------------EEEEeCCCcccccEEEEEE--C
Confidence 32 2223233355789999998877777767788999999876432 1122222222345667765 4
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++..+-..++.|...+..+++....+.
T Consensus 219 ~~ly~td~~~~~I~~~~~~~g~~~~~~~ 246 (266)
T d1ijqa1 219 DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (266)
T ss_dssp TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCcceEEEE
Confidence 4477777788899888988887665554
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.73 E-value=0.12 Score=44.92 Aligned_cols=165 Identities=10% Similarity=0.059 Sum_probs=91.8
Q ss_pred CcceEEeeCCCCCEEEEEE------------CCCcEEEEEcCCCCCCCCeeeeccC-----CCCeEEEEE--eCCCCcEE
Q psy4571 105 SRQDVAWHLLHESLFGSVA------------DDQKLMIWDTRSHNVSKPSHTVDAH-----TAEVNCLSF--NPYSEYIL 165 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~------------~dg~v~vwd~~~~~~~~~~~~~~~h-----~~~v~~l~~--~~~~~~~l 165 (437)
...+++..| ++..+++++ ..|.|.++|+.+.........+.+. .-....+.. .++|...|
T Consensus 36 G~EDi~~~~-dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L 114 (340)
T d1v04a_ 36 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 114 (340)
T ss_dssp CCCEEEECT-TSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceEEECC-CCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEE
Confidence 455777777 444444432 1488999998754321111111111 112344443 45666545
Q ss_pred EEEe---CCCeEEEEeCCCCceeeeEe---c-cCCCceEEEEEcCCCCcEEEEEe--C-C------------CeEEEEEc
Q psy4571 166 ATGS---ADKTVALWDLRNLKLKLHSF---E-SHKDEIFQVQWSPHNETILASSG--T-D------------RRLHVWDL 223 (437)
Q Consensus 166 ~sgs---~dg~i~lwd~~~~~~~~~~~---~-~h~~~v~~v~~~p~~~~~l~sg~--~-d------------g~i~vwd~ 223 (437)
++.. ...+|.+|++......+... . ......+++++..++. +++|-. . + +...+|..
T Consensus 115 ~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~ 193 (340)
T d1v04a_ 115 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 193 (340)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCC-EEEecCccCcChhhhhhhHhhcCCceeEEEE
Confidence 5543 35678888876543222211 1 1123468888888886 576631 0 0 22334433
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
..... ......-...+.|+++|+++.++++-...+.|+.|++.....+
T Consensus 194 ~~~~~---------------~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l 241 (340)
T d1v04a_ 194 SPNDV---------------RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL 241 (340)
T ss_dssp CSSCE---------------EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred cCCce---------------EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCccc
Confidence 33211 1111223467999999999988888889999999999865433
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.62 E-value=0.0064 Score=51.30 Aligned_cols=101 Identities=14% Similarity=0.083 Sum_probs=61.4
Q ss_pred EEeCC--CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-----eEEEEEcCCCCC
Q psy4571 156 SFNPY--SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGE 228 (437)
Q Consensus 156 ~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-----~i~vwd~~~~~~ 228 (437)
..+|+ |++++.+ .+|.|.+.|+..++ ...+..+.+.+...+|||||+++..+...++ .|.+++..++..
T Consensus 5 ~~sPdi~G~~v~f~--~~~dl~~~d~~~g~--~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~ 80 (281)
T d1k32a2 5 LLNPDIHGDRIIFV--CCDDLWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI 80 (281)
T ss_dssp CEEEEEETTEEEEE--ETTEEEEEETTTCC--EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred ccCCCCCCCEEEEE--eCCcEEEEECCCCC--EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence 45788 9874444 34678888998755 4456667788899999999997555543332 367777766543
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+.... -..............|+|+|+.++.+
T Consensus 81 ~~lt~~--------~~~~~~~~~~~~~~~~spdg~~l~~~ 112 (281)
T d1k32a2 81 KRITYF--------SGKSTGRRMFTDVAGFDPDGNLIIST 112 (281)
T ss_dssp EECCCC--------CEEEETTEECSEEEEECTTCCEEEEE
T ss_pred EEeeec--------CCCccCccccccccccCCCCCEEEEE
Confidence 221000 00011122344678899999944433
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.49 E-value=0.0011 Score=46.08 Aligned_cols=52 Identities=46% Similarity=0.891 Sum_probs=46.6
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
|.++.+++..|...|..+....+ |.+++...+.++.++++|-.+|.+||...
T Consensus 1 w~ls~ee~~~y~~~F~~~D~d~~------G~i~~~e~~~~l~~~~l~~~~l~~i~~~~ 52 (92)
T d1fi6a_ 1 WKITDEQRQYYVNQFKTIQPDLN------GFIPGSAAKEFFTKSKLPILELSHIWELS 52 (92)
T ss_dssp CCCCHHHHHHHHHHHTTTCCSTT------CEEEHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCcc------cchhHHHHHHHHHHccCCHHHHHHHHHHh
Confidence 78899999999999998876544 89999999999999999999999999753
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.30 E-value=0.033 Score=49.52 Aligned_cols=117 Identities=8% Similarity=0.034 Sum_probs=68.6
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
....+.++|||+++++++..+.++-|+|++....... ....+...+.......-.-..-+|...|. ...|---|..
T Consensus 276 sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~---~~~~~~~~~~~e~elglgPLht~fd~~g~-aytslfids~ 351 (459)
T d1fwxa2 276 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY---ENADPRSAVVAEPELGLGPLHTAFDGRGN-AYTSLFLDSQ 351 (459)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH---SCC-GGGGEEECCBCCSCEEEEEECTTSE-EEEEETTTTE
T ss_pred CCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhc---ccCCccccEEeecccCcCccccccCCCce-EEEEeeccce
Confidence 3467899999999888999999999999975322110 00001111211112223345567888775 5666678999
Q ss_pred EEEEeCCCC----------CCceeeeee--ecccCCceeeeecCCCCcccccC
Q psy4571 275 MQEYCDSTD----------SDTKTMRLD--SIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 275 i~iwd~~~~----------~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
|.-|++... ..+..+..+ ..|......-...|+|++|++..
T Consensus 352 v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~n 404 (459)
T d1fwxa2 352 VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 404 (459)
T ss_dssp EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred EEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEec
Confidence 999998532 122222221 11111122225689999998874
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0017 Score=45.37 Aligned_cols=51 Identities=29% Similarity=0.591 Sum_probs=44.9
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
|.++.++...|...|..+. . .-|.+++..++.+|.++++|-.+|.+||...
T Consensus 2 w~ls~ee~~~y~~~F~~~D-~------~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~ 52 (95)
T d2jxca1 2 WAVKPEDKAKYDAIFDSLS-P------VNGFLSGDKVKPVLLNSKLPVDILGRVWELS 52 (95)
T ss_dssp CSSCHHHHHHHHHHHHHTC-C------BTTEEEHHHHHHHHTTSSCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhC-C------CCCceeHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 7889999999999998876 2 2389999999999999999999999999753
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.0027 Score=44.26 Aligned_cols=52 Identities=25% Similarity=0.503 Sum_probs=45.7
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
|-++.+++..|...|..+....+ |.+++..++.++.++++|-.+|.+||...
T Consensus 2 w~lt~~e~~~~~~~F~~~D~d~~------G~is~~e~~~~l~~~~l~~~~l~~i~~~~ 53 (95)
T d1c07a_ 2 WVVSPAEKAKYDEIFLKTDKDMD------GFVSGLEVREIFLKTGLPSTLLAHIWSLC 53 (95)
T ss_dssp CSSCSHHHHHHHHHHHHHCTTCS------SEECHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCC------CCCcHHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 77888888899999998876544 89999999999999999999999999753
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.00082 Score=48.45 Aligned_cols=52 Identities=52% Similarity=0.880 Sum_probs=46.8
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
-|.++.++++.|...|..+....+ |.+++..++.+|.+++||-.+|.+||..
T Consensus 13 ~~~lt~ee~~~y~~lF~~~D~d~~------G~Is~~e~~~~l~~s~L~~~~L~~Iw~l 64 (110)
T d1iq3a_ 13 PWRITEEQREYYVNQFRSLQPDPS------SFISGSVAKNFFTKSKLSIPELSYIWEL 64 (110)
T ss_dssp SCCCSSSSHHHHHHHHHHHCCSSS------SEEEHHHHHHHCCSSSCSSCCHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCCCcc------cchhHHHHHHHHHhhccchHHHHHHHHH
Confidence 588999999999999998876544 8999999999999999999999999985
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.85 E-value=0.41 Score=40.07 Aligned_cols=230 Identities=12% Similarity=0.145 Sum_probs=139.9
Q ss_pred eEEEEEeeecc-ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQ-NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~-~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
++.+.|+.... ....+....+.--+| ..+.+|.-+ ..++.++|++ ....++...- ..+|.--.|-.+.. |+
T Consensus 46 ~VvIidl~n~~~~~Rrpi~AdsAIMhP-~~~IiALra-g~~LQiFnle---tK~klks~~~-~e~VvfWkWis~~~--L~ 117 (327)
T d1utca2 46 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIE---MKSKMKAHTM-TDDVTFWKWISLNT--VA 117 (327)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECS-SSSEEEEEE-TTEEEEEETT---TTEEEEEEEC-SSCCCEEEESSSSE--EE
T ss_pred eEEEEECCCCCcceecccchhhhhcCC-CCcEEEEec-CCeEEEEehh---HhhhhceEEc-CCCcEEEEecCCCE--EE
Confidence 45666654333 223344556677789 677887766 6689999998 4444554433 44677778875543 55
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCC----CceEEEEEcCCCCcEEEEE--eC----CCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASS--GT----DRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~sg--~~----dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
--+ +..|.=|+++....|...+..|. ..|-.-..++++++++++| .. .|.+.+|..+..
T Consensus 118 lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~---------- 186 (327)
T d1utca2 118 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------- 186 (327)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------
T ss_pred EEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC----------
Confidence 444 45799999976566677776654 3577777889998766665 22 356788887763
Q ss_pred CCCCceEEEecCccccEEEEEEccCC--CeEEEEE---eCCCeEEEEeCCCCCC------ceeeeeee---cccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNE--PWVICSV---SEDNIMQEYCDSTDSD------TKTMRLDS---IRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~--~~~l~s~---~~dg~i~iwd~~~~~~------~~~~~~~~---~~~~~~~~~ 302 (437)
.-+.++||......+....+. ..+++-+ ...+.+++-++..... .+...... ...+-++.+
T Consensus 187 -----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvam 261 (327)
T d1utca2 187 -----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 261 (327)
T ss_dssp -----EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEE
T ss_pred -----cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEE
Confidence 235577887655555443221 1244333 2336888888865321 11112211 123345566
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEES 352 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~ 352 (437)
..|+.-..+..-+.-|. ++++|+.||.++..-.-..+.+
T Consensus 262 qvs~kygiiyviTK~G~-----------i~lyDleTgt~i~~nRIs~~~i 300 (327)
T d1utca2 262 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETI 300 (327)
T ss_dssp EEETTTTEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSCE
T ss_pred EeeccCCEEEEEecCcE-----------EEEEEcccccEEEEeecCCCce
Confidence 67777777777777776 8999999998775443333333
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.01 E-value=2.3 Score=39.30 Aligned_cols=58 Identities=10% Similarity=-0.090 Sum_probs=39.1
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
|.|.-+|+++++........... .....+-.+.+++.|+.|+. ++.+|..+|+++-.+
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~----~~g~l~TagglVf~G~~dg~-----------l~A~Da~tGe~lW~~ 501 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAA----WGGTLYTKGGLVWYATLDGY-----------LKALDNKDGKELWNF 501 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC----CSBCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEE
T ss_pred ccEEEeccCCCceeeEcCCCCCC----CcceeEecCCEEEEECCCCe-----------EEEEECCCCcEEEEE
Confidence 56888888888877666543221 22223335667777888888 788888888887554
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.52 E-value=0.73 Score=41.11 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=66.7
Q ss_pred CeEEEEEeCCCCcEEEEEeCCC----eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC------------
Q psy4571 151 EVNCLSFNPYSEYILATGSADK----TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT------------ 214 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg----~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~------------ 214 (437)
.+...+++|++++++++-+.+| .|++.|+.+++.....+.. .....++|.++++.++.+.-.
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~ 203 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccccccc
Confidence 3456678999998666666555 4999999997653333321 122568999999976555421
Q ss_pred ---CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 215 ---DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 215 ---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
...|..+.+.+..... ..++........+..+..+++++++++...
T Consensus 204 ~~~~~~v~~h~lgt~~~~d----------~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~ 252 (430)
T d1qfma1 204 TNLHQKLYYHVLGTDQSED----------ILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (430)
T ss_dssp CCCCCEEEEEETTSCGGGC----------EEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cCCcceEEEEECCCCcccc----------ccccccccCCceEEeeeccCCcceeeEEee
Confidence 1257777776643221 222322223345777888999997765543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.49 E-value=2.3 Score=37.59 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=64.1
Q ss_pred ceEEeeCCCCCEEE-EEECCC----cEEEEEcCCCCCCCCee-eeccCCCCeEEEEEeCCCCcEEEEEeC----------
Q psy4571 107 QDVAWHLLHESLFG-SVADDQ----KLMIWDTRSHNVSKPSH-TVDAHTAEVNCLSFNPYSEYILATGSA---------- 170 (437)
Q Consensus 107 ~~~~~sp~~~~~l~-~~~~dg----~v~vwd~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~sgs~---------- 170 (437)
..+++||+ ++++| +-+.+| .|+++|+.++ +.+. .+. ......++|.+++..++.+.-.
T Consensus 128 ~~~~~Spd-~~~la~s~d~~G~e~~~l~v~Dl~tg---~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~ 201 (430)
T d1qfma1 128 RGYAFSED-GEYFAYGLSASGSDWVTIKFMKVDGA---KELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (430)
T ss_dssp EEEEECTT-SSEEEEEEEETTCSCEEEEEEETTTT---EEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred cceEecCC-CCEEEEEeccccCchheeEEeccCcc---eecccccc--cccccceEEcCCCCEEEEEEeccccCcccccc
Confidence 45678995 55554 444444 6899999954 3322 111 1112468899999975555421
Q ss_pred -----CCeEEEEeCCCCcee-eeEeccC--CCceEEEEEcCCCCcEEEEEeC--CCe--EEEEEcCC
Q psy4571 171 -----DKTVALWDLRNLKLK-LHSFESH--KDEIFQVQWSPHNETILASSGT--DRR--LHVWDLSK 225 (437)
Q Consensus 171 -----dg~i~lwd~~~~~~~-~~~~~~h--~~~v~~v~~~p~~~~~l~sg~~--dg~--i~vwd~~~ 225 (437)
...|..+.+.+.... ...+... ...+..+..+++++++++.... ++. +.+.|+..
T Consensus 202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~ 268 (430)
T d1qfma1 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (430)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred cccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCC
Confidence 235888888775331 2233322 2346678889999986655432 333 44445443
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.59 E-value=1.6 Score=40.54 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=35.6
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STAS 313 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s 313 (437)
.+. +++.|+.||.++.+|.++|+.+.++.+..... ...+.+..||+ +++.
T Consensus 474 agg-lVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~--a~P~ty~~dGkqYi~v 524 (571)
T d2ad6a1 474 KGG-LVWYATLDGYLKALDNKDGKELWNFKMPSGGI--GSPMTYSFKGKQYIGS 524 (571)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEE
T ss_pred cCC-EEEEECCCCeEEEEECCCCcEEEEEECCCCce--ecceEEEECCEEEEEE
Confidence 345 77789999999999999999998887643222 22345566886 5543
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.17 E-value=0.039 Score=38.35 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=36.1
Q ss_pred HHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 378 YYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 378 ~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
.|...|..+...-+ |.+++..++.+|.+++||..+|.+||+..
T Consensus 12 ~y~~~F~~~D~d~~------G~i~~~e~~~~l~~s~L~~~~L~~i~~~~ 54 (99)
T d1qjta_ 12 VYEKYYRQVEAGNT------GRVLALDAAAFLKKSGLPDLILGKIWDLA 54 (99)
T ss_dssp HHHHHHHHHCCTTS------SCCCSHHHHHHHHTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCC------CcccHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 46677877765433 79999999999999999999999999864
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=91.83 E-value=0.61 Score=40.58 Aligned_cols=105 Identities=15% Similarity=0.044 Sum_probs=60.7
Q ss_pred EEEEcCCCCcEEEEEeCCC-----------eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 198 QVQWSPHNETILASSGTDR-----------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
......+|+ +++.|+.+. .+.+||..+..-... ......|.......++.++|. ++
T Consensus 24 ~a~~~~~gk-v~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~-----------~~~~~~~~~~~~~~~~~~~g~-i~ 90 (387)
T d1k3ia3 24 AAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR-----------TVTVTKHDMFCPGISMDGNGQ-IV 90 (387)
T ss_dssp EEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC-----------EEEECSCCCSSCEEEECTTSC-EE
T ss_pred EEEEeeCCE-EEEEEeecCcccCCCCCceeEEEEEECCCCcEeec-----------CCCCCCcccceeEEEEecCCc-EE
Confidence 333444555 566666321 367899988654321 011122333334567889998 77
Q ss_pred EEEeCC-CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 267 CSVSED-NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 267 ~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+.|+.+ ..+.+||..+..-...-.. ........++..+||++++.|+..
T Consensus 91 v~Gg~~~~~~~~yd~~~~~w~~~~~~--~~~r~~~~~~~~~dG~v~v~GG~~ 140 (387)
T d1k3ia3 91 VTGGNDAKKTSLYDSSSDSWIPGPDM--QVARGYQSSATMSDGRVFTIGGSW 140 (387)
T ss_dssp EECSSSTTCEEEEEGGGTEEEECCCC--SSCCSSCEEEECTTSCEEEECCCC
T ss_pred EeecCCCcceeEecCccCcccccccc--cccccccceeeecCCceeeecccc
Confidence 777654 6899999987643221111 112233456778899988888754
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=91.38 E-value=3.8 Score=35.04 Aligned_cols=152 Identities=12% Similarity=0.179 Sum_probs=87.3
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC----CCC-cEEEEEe-C-C--CeEEEEeCCCCcee
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP----YSE-YILATGS-A-D--KTVALWDLRNLKLK 185 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~~-~~l~sgs-~-d--g~i~lwd~~~~~~~ 185 (437)
+..+++...+.+-|.+||++ ++.+..+. .++++.+..-. .+. .-++.++ . + .+|.+|.+......
T Consensus 39 ~~SlI~gTdK~~Gl~vYdL~----G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~ 112 (353)
T d1h6la_ 39 QNSKLITTNKKSGLAVYSLE----GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (353)
T ss_dssp GGCEEEEEETTSCCEEEETT----CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred CccEEEEEcCcCCEEEEcCC----CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence 34577667777779999996 56665543 35677766542 111 1244444 2 2 36778877542322
Q ss_pred eeEeccC-------CCceEEEEE--cCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 186 LHSFESH-------KDEIFQVQW--SPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 186 ~~~~~~h-------~~~v~~v~~--~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+..+... ...++.+|+ +|. +...++....+|.+..|.+........ ....++.+.- ...+..
T Consensus 113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v-------~~~lvr~f~~-~~q~EG 184 (353)
T d1h6la_ 113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYI-------SGKKVRAFKM-NSQTEG 184 (353)
T ss_dssp EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSE-------EEEEEEEEEC-SSCEEE
T ss_pred cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCce-------eeEeeeccCC-CCccce
Confidence 3333221 124677777 564 443456667889999888744321110 0133444433 456888
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
+.+.+..+ .|..+-.+.-+..++.+
T Consensus 185 CVvDde~~-~LyisEE~~Giw~~~a~ 209 (353)
T d1h6la_ 185 MAADDEYG-SLYIAEEDEAIWKFSAE 209 (353)
T ss_dssp EEEETTTT-EEEEEETTTEEEEEESS
T ss_pred EEEeCCCC-cEEEecCccceEEEEec
Confidence 88988888 45566677666666654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=90.32 E-value=1.9 Score=39.80 Aligned_cols=51 Identities=10% Similarity=-0.010 Sum_probs=36.3
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-ccccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASE 314 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~ 314 (437)
.+. +++.|+.||.++.+|.++|+.+.++.+..... ...+.+..+|+ +++..
T Consensus 468 agg-lVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~--~~P~ty~~dGkqyv~v~ 519 (560)
T d1kv9a2 468 AGN-LVFQGTAAGQMHAYSADKGEALWQFEAQSGIV--AAPMTFELAGRQYVAIM 519 (560)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEEE
T ss_pred CCC-EEEEECCCCcEEEEECCCCcEeEEEECCCCcc--ccCEEEEECCEEEEEEE
Confidence 455 77789999999999999999998888654322 22345567785 55443
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=90.01 E-value=2.2 Score=39.53 Aligned_cols=50 Identities=12% Similarity=0.012 Sum_probs=35.8
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STAS 313 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s 313 (437)
.+. ++++|+.||.++.+|.++|+.+.++.+....... .+.+..+|+ +++.
T Consensus 487 agg-lVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~--P~ty~~~GkQYv~v 537 (573)
T d1kb0a2 487 AGN-VVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA--PSTYMVDGRQYVSV 537 (573)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC--CEEEEETTEEEEEE
T ss_pred cCC-EEEEECCCCeEEEEECCCCcEeEEEECCCCcccc--CEEEEECCEEEEEE
Confidence 455 7778999999999999999999888865432222 245566786 4433
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=88.20 E-value=8.1 Score=34.17 Aligned_cols=55 Identities=13% Similarity=0.216 Sum_probs=37.5
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-eeEec------cCCCceEEEEEcCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSFE------SHKDEIFQVQWSPH 204 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~------~h~~~v~~v~~~p~ 204 (437)
-...++|+|.|+++ +|++--.+|.|++++..++... +..+. .-++....|+|+|+
T Consensus 26 L~~P~~la~~pdg~-llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCe-EEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 34678999999998 4655545799999998775431 11111 12356789999996
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.74 E-value=0.89 Score=42.41 Aligned_cols=51 Identities=6% Similarity=0.003 Sum_probs=37.3
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STAS 313 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s 313 (437)
..+. ++++|+.||.++.+|.++|+.+.++.+....... .+.+..+|+ +++.
T Consensus 495 tagg-lVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~--P~ty~~~G~qYv~i 546 (582)
T d1flga_ 495 TAGN-LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSP--PITWEQDGEQYLGV 546 (582)
T ss_dssp ETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC--CEEEEETTEEEEEE
T ss_pred EcCC-eEEEeCCCCeEEEEECCCCcEeEEEECCCCcccc--CEEEEECCEEEEEE
Confidence 3556 7778999999999999999999988875433322 346677885 5543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=87.44 E-value=10 Score=34.54 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=35.6
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
|.|.-+|+.+++. +.... ...+...-.+.-.+. +++.|+.||.++.+|.++++..-+
T Consensus 438 G~l~A~D~~tGk~-~W~~~-~~~~~~gg~l~Tagg-lVF~G~~dg~l~A~Da~tGe~LW~ 494 (560)
T d1kv9a2 438 GALLAWDPVKQKA-AWKVP-YPTHWNGGTLSTAGN-LVFQGTAAGQMHAYSADKGEALWQ 494 (560)
T ss_dssp EEEEEEETTTTEE-EEEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred cceEEEeCCCCeE-eeecc-CCCCCCCceeEECCC-EEEEECCCCcEEEEECCCCcEeEE
Confidence 5678888888665 33332 122222112222344 677899999999999999865433
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=87.02 E-value=9.6 Score=33.68 Aligned_cols=54 Identities=13% Similarity=0.218 Sum_probs=35.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee------ccCCCCeEEEEEeCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV------DAHTAEVNCLSFNPY 160 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~------~~h~~~v~~l~~~~~ 160 (437)
...+|+|.| ++++|++--..|.|++++..+.. ...+..+ ..-.+....|+++|+
T Consensus 28 ~P~~la~~p-dg~llVter~~G~i~~v~~~~g~-~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 28 KPHALLWGP-DNQIWLTERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SEEEEEECT-TSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEeC-CCeEEEEEecCCEEEEEECCCCc-EeecccCCccccccCCCCceeeEEeCCC
Confidence 456999999 57777655457999999876432 1222221 122356889999985
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=85.09 E-value=10 Score=32.09 Aligned_cols=106 Identities=10% Similarity=0.020 Sum_probs=62.2
Q ss_pred EEEEEE---CCCcEEEEEcCCCCC-CCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeC---------------CCeEEEE
Q psy4571 118 LFGSVA---DDQKLMIWDTRSHNV-SKPSHTVD-AHTAEVNCLSFNPYSEYILATGSA---------------DKTVALW 177 (437)
Q Consensus 118 ~l~~~~---~dg~v~vwd~~~~~~-~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~---------------dg~i~lw 177 (437)
+|++.. ...+|.++++..... ...+.++. ......+++++..++. +++|-.. -+...+|
T Consensus 113 ~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~ 191 (340)
T d1v04a_ 113 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVT 191 (340)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCC-EEEecCccCcChhhhhhhHhhcCCceeEE
Confidence 444443 345788888764321 11112221 1224578999999888 4777321 1223334
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
..+..+. ......-...+.|+++|++++++++-...++|++|++...
T Consensus 192 ~~~~~~~--~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~ 238 (340)
T d1v04a_ 192 YYSPNDV--RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN 238 (340)
T ss_dssp EECSSCE--EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred EEcCCce--EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence 3333222 2222223457899999999988888888999999999754
|
| >d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=80.60 E-value=17 Score=31.42 Aligned_cols=113 Identities=10% Similarity=0.058 Sum_probs=62.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-CCCCCee----eeccCCCCeEEEEEeCCCCcEEEEEeCC----CeE
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSH----TVDAHTAEVNCLSFNPYSEYILATGSAD----KTV 174 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~----~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~i 174 (437)
..+.+|+++|.+.+++.++...|-| |.-.++ ...+++. ........+.+|+++|..+..+..+..+ ...
T Consensus 12 g~~~~i~~~P~~~~~~ya~~~~gGv--~~S~dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~tg~~~~~~~~ 89 (427)
T d2ebsa1 12 GYITGIVAHPKTKDLLYARTDIGGA--YRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 89 (427)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCE--EEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CcEEEEEECCCCCCEEEEEecCCCE--EEEECCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEEeccccCCcCc
Confidence 4678999999988888888876654 333221 1111111 1112234689999999877666665432 112
Q ss_pred EEEeCCCCceeeeEec---------cCCCceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 175 ALWDLRNLKLKLHSFE---------SHKDEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~---------~h~~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
.+|--..+..--..+. .....+..++++|.+...+..++.++-|
T Consensus 90 gi~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~i~v~P~~~~~v~~~~~~~gl 142 (427)
T d2ebsa1 90 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI 142 (427)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEECTTCTTCEEEECSSSCE
T ss_pred cEEEeCCCCccceeecCCcccCccccCccceeEEEECCCccCcccccccccce
Confidence 3443333222111111 0112356788999876656666655544
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=80.45 E-value=21 Score=32.61 Aligned_cols=58 Identities=9% Similarity=-0.120 Sum_probs=40.3
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
|.|.-||+.+++......... ....-..+-.|.+++.|+.|+. ++.+|..+|+++-++
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~----~~~gg~lsTagglVF~G~~Dg~-----------l~A~Da~TGe~LW~~ 510 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTLDGY-----------LKARDSDTGDLLWKF 510 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceecccCCCC----CCccceeEecCCEEEEECCCCe-----------EEEEECCCCcEeeEE
Confidence 578889999988766554322 2222233446777888998988 788888888887555
|