Psyllid ID: psy4595


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTVNASSLSLYSSGQANSADSALRRQTGAKCKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR
cccccccccccHHHccccEEEccEEEEEEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccEEEccccHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEccEEEEEEcccccEEEEccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHcccccccEEEEccccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHccc
cccccccccccccccccEEEEEEEEEEEEcccHHHHHHHHcccccHHHccccccccccccccccHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEEEEcccHHHHHHHHcccccHHHHccccccEEEccccccEEEEEEEcccccccccccccccccccccHHccccccEEEEcccccccccccccccccccEEEEcccccccccccccccHHHHcHHHHHHHHHHHcccHHHHHHHHcc
maasslqgglsklkkKHFRVKHQKVklfraneplLSVFMWGVNhtvnasslslyssgqansadSALRRQtgakckewrvphsvgiltLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQKVklfraneplLSVFMWGVNHtinelshvtipvmllpddfraysklkvdnhlfnkshvrgiLLPKELAQMSSDQCYYRINELSHvtipvmllpddfraysklkvdnhlfnkenmpshfkikeycPLVFRNLRerfgiddldykesmtr
maasslqgglsklkkkhfrvkhqkvklfranePLLSVFMWGVNHTVNASSLSLYSSGQANSADSALRRQTgakckewrvphsvgILTLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQkvklfranepLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLfnkenmpshfkiKEYCPLVFRNLRerfgiddldykesmtr
MAAsslqgglsklkkkHFRVKHQKVKLFRANEPLLSVFMWGVNHTVNASSLSLYSSGQANSADSALRRQTGAKCKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLAQATMAAsslqgglsklkkkHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR
****************HFRVKHQKVKLFRANEPLLSVFMWGVNHTVNASSLSL*****************GAKCKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLD*******
***********************KVKLFRANEPLLSVFMWGVNHTVNASSLSLYS*********************WRVPHSVGILTLGESVYNLQYRKFACKIAV****************************************EPLLSVFMWGVN**********************************************LAQMSSDQCYYRIN***HVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMT*
********************KHQKVKLFRANEPLLSVFMWGVNHTVNASSLSLYS******************CKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR
**************KKHFRVKHQKVKLFRANEPLLSVFMWGVNHTVNASSL*L****************TGAKCKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLA*****************KKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTVNASSLSLYSSGQANSADSALRRQTGAKCKEWRVPHSVGILTLGESVYNLQYRKFACKIAVHVHRLAQATMAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
Q5F356 405 Phosphatidylinositol 5-ph yes N/A 0.402 0.283 0.468 2e-34
Q9R0I8 406 Phosphatidylinositol 5-ph yes N/A 0.412 0.290 0.460 3e-34
O70172 405 Phosphatidylinositol 5-ph yes N/A 0.412 0.291 0.460 7e-34
P48426 406 Phosphatidylinositol 5-ph yes N/A 0.412 0.290 0.460 7e-34
O13010 406 Phosphatidylinositol 5-ph yes N/A 0.412 0.290 0.460 7e-34
O88377 416 Phosphatidylinositol 5-ph no N/A 0.409 0.281 0.462 5e-32
P78356 416 Phosphatidylinositol 5-ph no N/A 0.409 0.281 0.462 5e-32
Q80XI4 416 Phosphatidylinositol 5-ph no N/A 0.409 0.281 0.462 6e-32
Q6IQE1 416 Phosphatidylinositol 5-ph no N/A 0.360 0.247 0.440 1e-29
Q8TBX8 421 Phosphatidylinositol 5-ph no N/A 0.412 0.280 0.426 8e-28
>sp|Q5F356|PI42A_CHICK Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Gallus gallus GN=PIP4K2A PE=2 SV=1 Back     alignment and function desciption
 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/173 (46%), Positives = 97/173 (56%), Gaps = 58/173 (33%)

Query: 114 ATMAASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVML 173
           A    +S+    +K KKKHF V  QKVKLFRA++PLLSV MWGVNH+INELSHV IPVML
Sbjct: 3   APGTVASVMASKTKTKKKHFVV--QKVKLFRASDPLLSVLMWGVNHSINELSHVQIPVML 60

Query: 174 LPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDD 233
           +PDDF+AYSK+KVDNHLFNK +                                  +P  
Sbjct: 61  MPDDFKAYSKIKVDNHLFNKEN----------------------------------MPSH 86

Query: 234 FRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR 286
           F+                       KEYCP+VFRNLRERFGIDD D++ S+TR
Sbjct: 87  FK----------------------FKEYCPMVFRNLRERFGIDDQDFQNSLTR 117




Catalyzes the phosphorylation of phosphatidylinositol 5-phosphate (PtdIns5P) on the fourth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). May exert its function by regulating the levels of PtdIns5P. May regulate the pool of cytosolic PtdIns5P in response to the activation of tyrosine phosphorylation.
Gallus gallus (taxid: 9031)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 4EC: 9
>sp|Q9R0I8|PI42A_RAT Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus GN=Pip4k2a PE=1 SV=1 Back     alignment and function description
>sp|O70172|PI42A_MOUSE Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Mus musculus GN=Pip4k2a PE=1 SV=1 Back     alignment and function description
>sp|P48426|PI42A_HUMAN Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Homo sapiens GN=PIP4K2A PE=1 SV=2 Back     alignment and function description
>sp|O13010|PI42A_PIG Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Sus scrofa GN=PIP4K2A PE=2 SV=1 Back     alignment and function description
>sp|O88377|PI42B_RAT Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Rattus norvegicus GN=Pip4k2b PE=1 SV=1 Back     alignment and function description
>sp|P78356|PI42B_HUMAN Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Homo sapiens GN=PIP4K2B PE=1 SV=1 Back     alignment and function description
>sp|Q80XI4|PI42B_MOUSE Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Mus musculus GN=Pip4k2b PE=1 SV=1 Back     alignment and function description
>sp|Q6IQE1|PI42C_DANRE Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Danio rerio GN=pip4k2c PE=2 SV=1 Back     alignment and function description
>sp|Q8TBX8|PI42C_HUMAN Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Homo sapiens GN=PIP4K2C PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
332027212 500 Phosphatidylinositol-5-phosphate 4-kinas 0.398 0.228 0.594 2e-45
307169342 499 Phosphatidylinositol-5-phosphate 4-kinas 0.384 0.220 0.602 5e-45
383854599 430 PREDICTED: phosphatidylinositol-5-phosph 0.398 0.265 0.588 6e-45
322796358 434 hypothetical protein SINV_03124 [Solenop 0.384 0.253 0.602 8e-45
307201517 434 Phosphatidylinositol-5-phosphate 4-kinas 0.374 0.246 0.613 1e-44
340724656 430 PREDICTED: phosphatidylinositol-5-phosph 0.398 0.265 0.582 3e-44
328708400 470 PREDICTED: phosphatidylinositol-5-phosph 0.391 0.238 0.589 2e-43
328708398 418 PREDICTED: phosphatidylinositol-5-phosph 0.391 0.267 0.589 2e-43
242023572 402 Phosphatidylinositol-4-phosphate 5-kinas 0.402 0.286 0.567 3e-43
357615905 460 putative phosphatidylinositol-4-phosphat 0.374 0.232 0.595 3e-43
>gi|332027212|gb|EGI67301.1| Phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/170 (59%), Positives = 105/170 (61%), Gaps = 56/170 (32%)

Query: 117 AASSLQGGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPD 176
            A  +  GLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHV IPVMLLPD
Sbjct: 3   GAPQMSSGLSKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVNIPVMLLPD 62

Query: 177 DFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRA 236
           DFRAYSKLKVDNHLFNK +                                  +P  F+ 
Sbjct: 63  DFRAYSKLKVDNHLFNKEN----------------------------------MPSHFK- 87

Query: 237 YSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR 286
                                IKEYCPLVFRNLRERFGIDDLDYKESMTR
Sbjct: 88  ---------------------IKEYCPLVFRNLRERFGIDDLDYKESMTR 116




Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169342|gb|EFN62063.1| Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383854599|ref|XP_003702808.1| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|322796358|gb|EFZ18899.1| hypothetical protein SINV_03124 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307201517|gb|EFN81280.1| Phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340724656|ref|XP_003400697.1| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like isoform 1 [Bombus terrestris] gi|350398183|ref|XP_003485111.1| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|328708400|ref|XP_003243678.1| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328708398|ref|XP_001943744.2| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242023572|ref|XP_002432206.1| Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha, putative [Pediculus humanus corporis] gi|212517603|gb|EEB19468.1| Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|357615905|gb|EHJ69896.1| putative phosphatidylinositol-4-phosphate 5-kinase, type II, beta isoform 1 [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
FB|FBgn0039924 404 CG17471 [Drosophila melanogast 0.251 0.178 0.875 2.3e-48
UNIPROTKB|Q5F356 405 PIP4K2A "Phosphatidylinositol 0.251 0.177 0.819 5.2e-41
UNIPROTKB|F1MHR4 405 PIP4K2A "Uncharacterized prote 0.251 0.177 0.819 1.4e-40
UNIPROTKB|F1PPJ1 406 PIP4K2A "Uncharacterized prote 0.251 0.177 0.819 1.4e-40
UNIPROTKB|P48426 406 PIP4K2A "Phosphatidylinositol 0.251 0.177 0.819 1.4e-40
UNIPROTKB|O13010 406 PIP4K2A "Phosphatidylinositol 0.251 0.177 0.819 1.4e-40
MGI|MGI:1298206 405 Pip4k2a "phosphatidylinositol- 0.251 0.177 0.819 1.4e-40
RGD|621708 406 Pip4k2a "phosphatidylinositol- 0.251 0.177 0.819 1.4e-40
ZFIN|ZDB-GENE-080721-18 404 pip4k2aa "phosphatidylinositol 0.251 0.178 0.805 1.2e-39
UNIPROTKB|F1MHT2 416 PIP4K2B "Uncharacterized prote 0.251 0.173 0.777 1.9e-39
FB|FBgn0039924 CG17471 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 356 (130.4 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
 Identities = 63/72 (87%), Positives = 70/72 (97%)

Query:   215 YRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFG 274
             + INELSHV IPVMLLPDDFRAYSK+KVDNHLFNKENMPSHFK+KEYCPLVFRNLRERFG
Sbjct:    45 HTINELSHVNIPVMLLPDDFRAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRNLRERFG 104

Query:   275 IDDLDYKESMTR 286
             +DD+DY+ES+TR
Sbjct:   105 VDDVDYRESLTR 116


GO:0016308 "1-phosphatidylinositol-4-phosphate 5-kinase activity" evidence=ISS;NAS
GO:0016310 "phosphorylation" evidence=NAS
GO:0007155 "cell adhesion" evidence=IMP
GO:0008360 "regulation of cell shape" evidence=IMP
GO:0007015 "actin filament organization" evidence=IMP
GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA
UNIPROTKB|Q5F356 PIP4K2A "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MHR4 PIP4K2A "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PPJ1 PIP4K2A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P48426 PIP4K2A "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O13010 PIP4K2A "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1298206 Pip4k2a "phosphatidylinositol-5-phosphate 4-kinase, type II, alpha" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621708 Pip4k2a "phosphatidylinositol-5-phosphate 4-kinase, type II, alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080721-18 pip4k2aa "phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MHT2 PIP4K2B "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
cd00139 313 cd00139, PIPKc, Phosphatidylinositol phosphate kin 9e-18
smart00330 342 smart00330, PIPKc, Phosphatidylinositol phosphate 6e-15
PLN03185 765 PLN03185, PLN03185, phosphatidylinositol phosphate 2e-07
>gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information
 Score = 81.2 bits (201), Expect = 9e-18
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 214 YYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKE--NMPSHFKIKEYCPLVFRNLRE 271
            + + ELS V  P  LLPDDF+A SK+K  NH  +    ++ + FK K+YCP VFR LRE
Sbjct: 13  RHSVGELSSVPSPRDLLPDDFKAKSKIKFPNHGSHLTPPHLSADFKFKDYCPEVFRALRE 72

Query: 272 RFGIDDLDYKESMTR 286
            FGID+ DY  S+ R
Sbjct: 73  LFGIDEADYLRSLCR 87


CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs. Length = 313

>gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases Back     alignment and domain information
>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
KOG0229|consensus 420 99.97
PLN03185 765 phosphatidylinositol phosphate kinase; Provisional 99.84
cd00139 313 PIPKc Phosphatidylinositol phosphate kinases (PIPK 99.83
smart00330 342 PIPKc Phosphatidylinositol phosphate kinases. 99.02
COG5253 612 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si 98.16
KOG0229|consensus 420 97.99
cd00139 313 PIPKc Phosphatidylinositol phosphate kinases (PIPK 85.57
>KOG0229|consensus Back     alignment and domain information
Probab=99.97  E-value=4.7e-33  Score=266.10  Aligned_cols=105  Identities=47%  Similarity=0.704  Sum_probs=87.9

Q ss_pred             ccccccccccccceeeeeccCchhhHHHHhhhhhhhccccCCCc---ceeecCchhhhhccccccccccccCCCCCccch
Q psy4595         126 SKLKKKHFRVKHQKVKLFRANEPLLSVFMWGVNHTINELSHVTI---PVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLP  202 (286)
Q Consensus       126 ~~~~~~~~~~~~qk~k~fr~~~~l~~~~~~gv~~ti~~ls~~~~---~~mLmpDdf~~~~k~k~~~~~fn~e~~pg~~~~  202 (286)
                      .+++++++++..|||+.|++|+||++++||||+|||++||+||+   |+|++||++++++++++++|.||+         
T Consensus        21 ~~~~~~~~~~~g~~v~~~~~~~~l~~~lqlGI~~tVg~ls~v~~r~~~~~df~~~~k~~~~fp~~gs~~tp---------   91 (420)
T KOG0229|consen   21 KKLGKKHFVKQGEKVKKGHASYPLMLNLQLGIRHTVGSLSSVPERDLPVMDFPDVEKAYSKFPSEGSKFTP---------   91 (420)
T ss_pred             ccccccceeccCceEecccccHHHHHHHHhcchhhhcccccCCcccCchhhCchhhhhheecCCCCCccCC---------
Confidence            34445666777899999999999999999999999999999999   666677766666666666555443         


Q ss_pred             hhhhhhcccchhhhccccccccccCCCCccccccceEEEEeccCCCCCCCCCceEEEEcCcHHhHHHHHHhCCCcchhhh
Q psy4595         203 KELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKE  282 (286)
Q Consensus       203 k~y~~m~~~Q~~~rin~LtgI~vpr~Ltp~DFka~eKikvd~~lFgsE~TPsHFKFKDYCP~VFR~LRELFGIDpaDYMl  282 (286)
                                                                     ++.|+|||||||||+|||+|||+||||++|||+
T Consensus        92 -----------------------------------------------~h~~~~Fk~KdYcP~vFR~lRelFgId~~DYl~  124 (420)
T KOG0229|consen   92 -----------------------------------------------PHHSSDFKFKDYCPMVFRNLRELFGIDPADYLL  124 (420)
T ss_pred             -----------------------------------------------CCCccccchhhcChHHHHHHHHHhCCChHHHHH
Confidence                                                           445678999999999999999999999999999


Q ss_pred             hcCC
Q psy4595         283 SMTR  286 (286)
Q Consensus       283 SLc~  286 (286)
                      |||+
T Consensus       125 Slc~  128 (420)
T KOG0229|consen  125 SLCG  128 (420)
T ss_pred             HHhc
Confidence            9996



>PLN03185 phosphatidylinositol phosphate kinase; Provisional Back     alignment and domain information
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information
>smart00330 PIPKc Phosphatidylinositol phosphate kinases Back     alignment and domain information
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0229|consensus Back     alignment and domain information
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
1bo1_A 416 Phosphatidylinositol Phosphate Kinase Type Ii Beta 2e-32
2ybx_A 394 Crystal Structure Of Human Phosphatidylinositol-5-P 4e-32
2gk9_A 392 Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty 1e-26
>pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416 Back     alignment and structure

Iteration: 1

Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/149 (48%), Positives = 85/149 (57%), Gaps = 56/149 (37%) Query: 138 QKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVR 197 QKVKLFRA+EP+LSV MWGVNHTINELS+V +PVML+PDDF+AYSK+KVDNHLFNK + Sbjct: 31 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKEN-- 88 Query: 198 GILLPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFK 257 LP F+ Sbjct: 89 --------------------------------LPSRFK---------------------- 94 Query: 258 IKEYCPLVFRNLRERFGIDDLDYKESMTR 286 KEYCP+VFRNLRERFGIDD DY+ S+TR Sbjct: 95 FKEYCPMVFRNLRERFGIDDQDYQNSVTR 123
>pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394 Back     alignment and structure
>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 7e-20
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 5e-19
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 7e-05
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 Back     alignment and structure
 Score = 87.6 bits (216), Expect = 7e-20
 Identities = 59/70 (84%), Positives = 66/70 (94%)

Query: 217 INELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGID 276
           INELSHV IPVML+PDDF+AYSK+KVDNHLFNKENMPSHFK KEYCP+VFRNLRERFGID
Sbjct: 38  INELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGID 97

Query: 277 DLDYKESMTR 286
           D D++ S+TR
Sbjct: 98  DQDFQNSLTR 107


>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 Back     alignment and structure
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 99.96
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 99.94
2gk9_A 392 Phosphatidylinositol-4-phosphate 5-kinase, type II 99.11
2ybx_A 394 Phosphatidylinositol-5-phosphate 4-kinase type-2; 98.54
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Back     alignment and structure
Probab=99.96  E-value=2.9e-30  Score=241.09  Aligned_cols=95  Identities=72%  Similarity=1.230  Sum_probs=75.1

Q ss_pred             ccceeeeeccCchhhHHHHhhhhhhhccccCCCcceeecCchhhhhccccccccccccCCCCCccchhhhhhhcccchhh
Q psy4595         136 KHQKVKLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYY  215 (286)
Q Consensus       136 ~~qk~k~fr~~~~l~~~~~~gv~~ti~~ls~~~~~~mLmpDdf~~~~k~k~~~~~fn~e~~pg~~~~k~y~~m~~~Q~~~  215 (286)
                      .+||+|+||+++||++++||||+|||++|+++|+|+|||||                                       
T Consensus         5 ~~~~~~~~r~~~~~~~~~~~Gi~~~v~~~~~~~~~~~L~~~---------------------------------------   45 (392)
T 2gk9_A            5 VQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPD---------------------------------------   45 (392)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHTTSCCCSSCCGG---------------------------------------
T ss_pred             ceeeeeecCcchHHHHHHHHhHHHHhhcccCCCCccccChh---------------------------------------
Confidence            56999999999999999999999999999999999999999                                       


Q ss_pred             hccccccccccCCCCccccccceEEEEeccCCCCCCCCCceEEEEcCcHHhHHHHHHhCCCcchhhhhcCC
Q psy4595         216 RINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR  286 (286)
Q Consensus       216 rin~LtgI~vpr~Ltp~DFka~eKikvd~~lFgsE~TPsHFKFKDYCP~VFR~LRELFGIDpaDYMlSLc~  286 (286)
                                       ||++++|++++++.|++|++|++|+||||||.|||+||++||||++||+.|||+
T Consensus        46 -----------------df~~~~k~~~~~~~f~~e~~p~~f~~k~Y~P~~F~~LR~~~~i~~~dy~~Sl~~   99 (392)
T 2gk9_A           46 -----------------DFKASSKIKVNNHLFHRENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTR   99 (392)
T ss_dssp             -----------------GGGCEEEEEEECSSSCCSSSCSSBEEEEESHHHHHHHHHTTTCCHHHHHHHHHS
T ss_pred             -----------------HhhhheEEeeccccCCcccCCCceEEEEECHHHHHHHHHHhCCCHHHHHHHhcC
Confidence                             455555555555566667788899999999999999999999999999999985



>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Back     alignment and structure
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Back     alignment and structure
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1bo1a_ 383 d.143.1.2 (A:) Phosphatidylinositol phosphate kina 1e-28
d1bo1a_ 383 d.143.1.2 (A:) Phosphatidylinositol phosphate kina 1e-05
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  110 bits (276), Expect = 1e-28
 Identities = 71/146 (48%), Positives = 82/146 (56%), Gaps = 56/146 (38%)

Query: 141 KLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGIL 200
           KLFRA+EP+LSV MWGVNHTINELS+V +PVML+PDDF+AYSK+KVDNHLFNK +     
Sbjct: 1   KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKEN----- 55

Query: 201 LPKELAQMSSDQCYYRINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKE 260
                                        LP  F                      K KE
Sbjct: 56  -----------------------------LPSRF----------------------KFKE 64

Query: 261 YCPLVFRNLRERFGIDDLDYKESMTR 286
           YCP+VFRNLRERFGIDD DY+ S+TR
Sbjct: 65  YCPMVFRNLRERFGIDDQDYQNSVTR 90


>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d1bo1a_ 383 Phosphatidylinositol phosphate kinase IIbeta, PIPK 99.96
d1bo1a_ 383 Phosphatidylinositol phosphate kinase IIbeta, PIPK 98.86
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96  E-value=5.2e-31  Score=243.80  Aligned_cols=90  Identities=81%  Similarity=1.390  Sum_probs=81.0

Q ss_pred             eeeccCchhhHHHHhhhhhhhccccCCCcceeecCchhhhhccccccccccccCCCCCccchhhhhhhcccchhhhcccc
Q psy4595         141 KLFRANEPLLSVFMWGVNHTINELSHVTIPVMLLPDDFRAYSKLKVDNHLFNKSHVRGILLPKELAQMSSDQCYYRINEL  220 (286)
Q Consensus       141 k~fr~~~~l~~~~~~gv~~ti~~ls~~~~~~mLmpDdf~~~~k~k~~~~~fn~e~~pg~~~~k~y~~m~~~Q~~~rin~L  220 (286)
                      |||||++||++|+||||+|||++|+++|.|++|||||                                           
T Consensus         1 ~~~r~~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~d-------------------------------------------   37 (383)
T d1bo1a_           1 KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDD-------------------------------------------   37 (383)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGG-------------------------------------------
T ss_pred             CccccchHHHHHHHHhHHHHHHhhcCCCcchhcCccc-------------------------------------------
Confidence            6999999999999999999999999999999999994                                           


Q ss_pred             ccccccCCCCccccccceEEEEeccCCCCCCCCCceEEEEcCcHHhHHHHHHhCCCcchhhhhcCC
Q psy4595         221 SHVTIPVMLLPDDFRAYSKLKVDNHLFNKENMPSHFKIKEYCPLVFRNLRERFGIDDLDYKESMTR  286 (286)
Q Consensus       221 tgI~vpr~Ltp~DFka~eKikvd~~lFgsE~TPsHFKFKDYCP~VFR~LRELFGIDpaDYMlSLc~  286 (286)
                                   |++..++.++++.++++++|+|||||||||+|||+||++||||++||+.|||+
T Consensus        38 -------------F~~~~k~~~~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~~~dy~~Sl~~   90 (383)
T d1bo1a_          38 -------------FKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTR   90 (383)
T ss_dssp             -------------GTCEEEEEEECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCCHHHHHHHHHS
T ss_pred             -------------ceeeEEEecCCCCCCcCCCCCCeEEEEeCHHHHHHHHHHcCCCHHHHHHHhCC
Confidence                         55555555555666777788999999999999999999999999999999985



>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure