Psyllid ID: psy4905


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSENNQC
cEEEEHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHccccccccccccccccEEEcccEEEccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccHHcccccccccccccccccccccccc
ccEEEEHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccccccHHHHHHHHcHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccEEEEEccccccc
MVFVCLVKPIMAFVIIILQSmghyhdgdwrvnggYLYTTLLYNVSVSLALYGLFLFYFATrelltpfdpvlkfctIKSVIFLSFWQGVLLAVLEKVMIIeplidatgrptsagtvsaGYQNLLICIEMFFASWALraafpwgvyasghvtdaagrSVTMQSISSslklltpfdpvlkfctIKSVIFLSFWQGVLLAVLEKVMIIeplidatgrptsagtvsaGYQNLLICIEMFFASWALraafpwgvyasghvtdaagRSVTMQSISSSlketmnpkdimtdaihnfhpqyqqytqyssennqc
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDatgrptsagTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDatgrptsagTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQyqqytqyssennqc
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSlalyglflfyfaTRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSENNQC
*VFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDA***************************I**F*****************
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQY*************
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYT*********
MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSS*****
iHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSENNQC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query305 2.2.26 [Sep-21-2011]
Q8BG09407 Transmembrane protein 184 no N/A 0.554 0.415 0.604 3e-51
A2VDL9407 Transmembrane protein 184 yes N/A 0.554 0.415 0.604 5e-51
Q4QQS1425 Transmembrane protein 184 no N/A 0.547 0.392 0.6 8e-51
Q6ZMB5413 Transmembrane protein 184 yes N/A 0.531 0.392 0.613 1e-50
Q1RMW2414 Transmembrane protein 184 no N/A 0.550 0.405 0.623 1e-50
Q9Y519407 Transmembrane protein 184 no N/A 0.554 0.415 0.598 1e-50
Q3UFJ6425 Transmembrane protein 184 no N/A 0.547 0.392 0.588 3e-50
Q810F5503 Transmembrane protein 184 no N/A 0.449 0.272 0.388 1e-19
Q54PI4493 Transmembrane protein 184 yes N/A 0.455 0.281 0.381 2e-19
Q5ZMP3445 Transmembrane protein 184 no N/A 0.455 0.312 0.368 5e-19
>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 Back     alignment and function desciption
 Score =  202 bits (513), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/172 (60%), Positives = 128/172 (74%), Gaps = 3/172 (1%)

Query: 5   CLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELL 64
           C+VKP+MA   +ILQ+ G Y DGD+ V  GYLY T++YN+SVSLALY LFLFYFATRELL
Sbjct: 181 CVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELL 240

Query: 65  TPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLI 124
           +P+ PVLKF  +KSVIFLSFWQG+LLA+LEK   I P I++       GTV+AGYQ+ +I
Sbjct: 241 SPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAI-PKINSARVSVGEGTVAAGYQDFII 299

Query: 125 CIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLK-LLTPFDPV 175
           C+EMFFA+ ALR AF + VYA   + DA GR   M+SISSSLK  + P D V
Sbjct: 300 CVEMFFAALALRHAFTYKVYADKRL-DAQGRCAPMKSISSSLKETMNPHDIV 350




May activate the MAP kinase signaling pathway.
Mus musculus (taxid: 10090)
>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 Back     alignment and function description
>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 Back     alignment and function description
>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 Back     alignment and function description
>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 Back     alignment and function description
>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 Back     alignment and function description
>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 Back     alignment and function description
>sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1 Back     alignment and function description
>sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 Back     alignment and function description
>sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
242021730 442 conserved hypothetical protein [Pediculu 0.554 0.382 0.747 3e-68
345490661 432 PREDICTED: transmembrane protein 184B-li 0.554 0.391 0.747 7e-68
307210171 412 Transmembrane protein 184B [Harpegnathos 0.554 0.410 0.741 9e-68
345490659384 PREDICTED: transmembrane protein 184B-li 0.554 0.440 0.747 1e-67
170052256391 conserved hypothetical protein [Culex qu 0.554 0.432 0.735 2e-67
157109289390 hypothetical protein AaeL_AAEL005262 [Ae 0.554 0.433 0.735 3e-67
158295337401 AGAP006101-PA [Anopheles gambiae str. PE 0.554 0.421 0.729 6e-67
383847225 420 PREDICTED: transmembrane protein 184B-li 0.547 0.397 0.729 4e-65
189235090 435 PREDICTED: similar to CG12004 CG12004-PC 0.554 0.388 0.758 4e-63
322798641 430 hypothetical protein SINV_11534 [Solenop 0.554 0.393 0.747 5e-63
>gi|242021730|ref|XP_002431296.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516564|gb|EEB18558.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 127/170 (74%), Positives = 144/170 (84%), Gaps = 1/170 (0%)

Query: 5   CLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELL 64
           CLVKP+MAFVII LQ+ GHYHDGDW ++GGYLYTT++YN SVSLALYGLFLFYFATR+LL
Sbjct: 184 CLVKPLMAFVIIFLQAFGHYHDGDWSLDGGYLYTTIIYNFSVSLALYGLFLFYFATRDLL 243

Query: 65  TPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLI 124
           TPF+PVLKFCT+KSVIFLSFWQGVLLAV EK  +I+P+ +  G  T+AGTVSAGYQN LI
Sbjct: 244 TPFEPVLKFCTVKSVIFLSFWQGVLLAVFEKAEVIDPIANTLGEQTTAGTVSAGYQNFLI 303

Query: 125 CIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLK-LLTPFD 173
           CIEMFFA+ ALR AFP+ VYA    TDA GR VTMQSISSSLK  + P D
Sbjct: 304 CIEMFFAAVALRYAFPYQVYAQVCTTDARGRGVTMQSISSSLKETMNPKD 353




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490661|ref|XP_001602164.2| PREDICTED: transmembrane protein 184B-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307210171|gb|EFN86844.1| Transmembrane protein 184B [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|345490659|ref|XP_003426426.1| PREDICTED: transmembrane protein 184B-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|170052256|ref|XP_001862139.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873164|gb|EDS36547.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157109289|ref|XP_001650606.1| hypothetical protein AaeL_AAEL005262 [Aedes aegypti] gi|108879063|gb|EAT43288.1| AAEL005262-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|158295337|ref|XP_316160.4| AGAP006101-PA [Anopheles gambiae str. PEST] gi|157015988|gb|EAA11279.5| AGAP006101-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|383847225|ref|XP_003699255.1| PREDICTED: transmembrane protein 184B-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|189235090|ref|XP_968736.2| PREDICTED: similar to CG12004 CG12004-PC [Tribolium castaneum] gi|270004019|gb|EFA00467.1| hypothetical protein TcasGA2_TC003325 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|322798641|gb|EFZ20245.1| hypothetical protein SINV_11534 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
FB|FBgn0035236486 CG12004 [Drosophila melanogast 0.554 0.347 0.631 4.3e-54
UNIPROTKB|E2R3P6424 TMEM184A "Uncharacterized prot 0.557 0.400 0.558 9.3e-43
UNIPROTKB|Q1RMW2414 TMEM184A "Transmembrane protei 0.557 0.410 0.563 1.2e-42
WB|WBGene00009574398 F40E10.6 [Caenorhabditis elega 0.554 0.424 0.526 4e-42
UNIPROTKB|Q6ZMB5413 TMEM184A "Transmembrane protei 0.557 0.411 0.546 5.2e-42
UNIPROTKB|F1RIV1423 TMEM184A "Uncharacterized prot 0.557 0.401 0.534 6.6e-42
UNIPROTKB|A2VDL9407 TMEM184B "Transmembrane protei 0.554 0.415 0.540 8.4e-42
MGI|MGI:2445179407 Tmem184b "transmembrane protei 0.554 0.415 0.540 8.4e-42
UNIPROTKB|Q9Y519407 TMEM184B "Transmembrane protei 0.554 0.415 0.534 1.7e-41
RGD|1306702425 Tmem184a "transmembrane protei 0.554 0.397 0.534 1.7e-41
FB|FBgn0035236 CG12004 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 108/171 (63%), Positives = 129/171 (75%)

Query:     5 CLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSXXXXXXXXXXXXTRELL 64
             CLVKP++AF+II LQ+ GHYHDGDW  +GGY+Y T++YN+SVS            TR+LL
Sbjct:   201 CLVKPLVAFIIIFLQAFGHYHDGDWSADGGYIYITIIYNISVSLALYGLYLFYFATRDLL 260

Query:    65 TPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPT-SAGTVSAGYQNLL 123
             TPF+PVLKFCTIKSVIFLSFWQGV LA+LEK  +I P++D+ G  T   GTVSAGYQN  
Sbjct:   261 TPFEPVLKFCTIKSVIFLSFWQGVGLAILEKANVISPIVDSAGTVTVEPGTVSAGYQNFF 320

Query:   124 ICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQSISSSLK-LLTPFD 173
             ICIEM FA+ ALR AFP+ VYA   ++D  GRSVTMQSISSSLK  + P D
Sbjct:   321 ICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNPKD 371


GO:0030246 "carbohydrate binding" evidence=ISS
GO:0008039 "synaptic target recognition" evidence=IMP
UNIPROTKB|E2R3P6 TMEM184A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q1RMW2 TMEM184A "Transmembrane protein 184A" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
WB|WBGene00009574 F40E10.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZMB5 TMEM184A "Transmembrane protein 184A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RIV1 TMEM184A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A2VDL9 TMEM184B "Transmembrane protein 184B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2445179 Tmem184b "transmembrane protein 184b" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y519 TMEM184B "Transmembrane protein 184B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1306702 Tmem184a "transmembrane protein 184A" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6ZMB5T184A_HUMANNo assigned EC number0.61340.53110.3922yesN/A
A2VDL9T184B_BOVINNo assigned EC number0.60460.55400.4152yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
pfam03619272 pfam03619, Solute_trans_a, Organic solute transpor 3e-55
pfam03619272 pfam03619, Solute_trans_a, Organic solute transpor 6e-25
>gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha Back     alignment and domain information
 Score =  180 bits (458), Expect = 3e-55
 Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 5/140 (3%)

Query: 5   CLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELL 64
            +VKP+ A + IILQ+ G Y +G +  + GYLY T++YN+SVSLALY L LFY A ++ L
Sbjct: 138 VVVKPLCAILAIILQAFGVYGEGSFSPDSGYLYLTIIYNISVSLALYCLVLFYKALKDEL 197

Query: 65  TPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLI 124
            PF P+LKF  IK +IF SFWQGVL+++L  + +I+P             +SAG QN LI
Sbjct: 198 APFKPLLKFLCIKLIIFFSFWQGVLISILVSLGLIKPTEAWEE-----PELSAGIQNFLI 252

Query: 125 CIEMFFASWALRAAFPWGVY 144
           CIEMF  + A   AFP+  Y
Sbjct: 253 CIEMFIFAIAHLYAFPYKPY 272


This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272

>gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 305
KOG2641|consensus386 100.0
PF03619274 Solute_trans_a: Organic solute transporter Ostalph 100.0
PF03619274 Solute_trans_a: Organic solute transporter Ostalph 99.88
KOG2641|consensus386 99.29
>KOG2641|consensus Back     alignment and domain information
Probab=100.00  E-value=1e-41  Score=327.19  Aligned_cols=189  Identities=49%  Similarity=0.784  Sum_probs=171.1

Q ss_pred             CeeeeehhHHHHHHHHHHHHcCCccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhhhHHHHH
Q psy4905           1 MVFVCLVKPIMAFVIIILQSMGHYHDGDWRVNGGYLYTTLLYNVSVSLALYGLFLFYFATRELLTPFDPVLKFCTIKSVI   80 (305)
Q Consensus         1 vLQy~vvkPl~~iv~iil~~~G~Y~~g~~~~~~~~lyl~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~IK~vV   80 (305)
                      |+||+++||+++++++++++.|.|++|+++.   |+|+++++|+|+++|+|||.+||+++|++|.|++|+.||+|+|++|
T Consensus       166 vlQ~~ivkp~~~lv~lvl~~~g~y~~g~~~~---~~~~~~i~n~S~~lalY~L~~fy~~~~~~L~py~p~~KF~~vk~iv  242 (386)
T KOG2641|consen  166 VLQYPIVKPFLALVTLVLYAFGVYDDGDFSV---YLYLTIIYNCSVSLALYSLVLFYTVTKDELSPYQPVVKFLCVKLIV  242 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCCccc---eehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence            6899999999999999999999999999998   9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCCCCCCccchHHHhhhhHHHHHHHHHHHHHHHHhcCcccccCCCccCCCCchhhHh
Q psy4905          81 FLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWALRAAFPWGVYASGHVTDAAGRSVTMQ  160 (305)
Q Consensus        81 flsfwQ~~ii~iL~~~g~i~~~~~~~~~~~s~~~~~~~i~~~LiCiEM~~~ai~h~~aF~~~~y~~~~~~~s~~~~v~~~  160 (305)
                      |++|||++++++|++.|++++...+                                                       
T Consensus       243 f~~~wQg~vi~~l~~~g~~~~~~~~-------------------------------------------------------  267 (386)
T KOG2641|consen  243 FLSFWQGIVLAILVKLGKIGPSYFD-------------------------------------------------------  267 (386)
T ss_pred             HHHHHHHHHHHHHHHhcccCcccch-------------------------------------------------------
Confidence            9999999999999999998764220                                                       


Q ss_pred             hHHhhhcccCCCCcccchhhhhhhhhhhHHHHHHHHHHHHhcccccccccCCCCCCcchHHhhhhhHHHHHHHHHHHHHH
Q psy4905         161 SISSSLKLLTPFDPVLKFCTIKSVIFLSFWQGVLLAVLEKVMIIEPLIDATGRPTSAGTVSAGYQNLLICIEMFFASWAL  240 (305)
Q Consensus       161 ~~~~~~~~L~p~~P~~KFl~iK~vvF~sfwQ~i~i~il~~~g~i~~~~~~~~~~~~~~~~~~~~q~~liCiEM~~~ai~h  240 (305)
                                                                             ..+.++.++||++||+||+++|++|
T Consensus       268 -------------------------------------------------------~~~~~~~~iQnfiiciEM~i~ai~~  292 (386)
T KOG2641|consen  268 -------------------------------------------------------EVGTVAYGIQNFLICIEMLIAAIAH  292 (386)
T ss_pred             -------------------------------------------------------hHHHHHHHhhhhHHHHHHHHHHHHH
Confidence                                                                   0235788999999999999999999


Q ss_pred             hhcccccccccCcccCcCCCccchhchHHHHHhccChhhHHHHHHHccCcCCcceeeeccCC
Q psy4905         241 RAAFPWGVYASGHVTDAAGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSEN  302 (305)
Q Consensus       241 ~~aF~~~~Y~~~~~~~~~~~~~~~~~~~~a~~d~~~~~D~~~d~~~~f~~~y~~y~~~~~~~  302 (305)
                      .||||++||...+.....+|.+.+++..+.++|+++++|...|..|+|+|+|++|.++++.+
T Consensus       293 ~~af~~~~ya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  354 (386)
T KOG2641|consen  293 FYAFPAAPYALFDERSCDYRSVDMFSISSSLWDSLMPNDLCSDAIRNFSPTYQDYTPQSDQD  354 (386)
T ss_pred             HHhCCcchhccccccccccccccccccchHHHHhhcccCcccccccCCCcccccccccccCc
Confidence            99999999987654332356667777888999999999999999999999999999997654



>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function Back     alignment and domain information
>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function Back     alignment and domain information
>KOG2641|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 1e-04
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 9/31 (29%)

Query: 160 QSI---SSSLKLLTPFD--PVLKFCTIKSVI 185
           Q++    +SLKL    D  P L    IK+ +
Sbjct: 20  QALKKLQASLKLYAD-DSAPAL---AIKATM 46


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00