Psyllid ID: psy511

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSVV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEEEEEEEcHHHHHHHHHHHHHcccEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEEEEEEEcHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MPAFERMLWRACRGNvflrqaeietpledinsgdpvyKSVFIIFFQGDQLKTRVMKIcegkklssvv
Flexible Loop (DISEMBL)
MPAFERMLWRACRGNVFLRQAEIetpledinsgdpVYKSVFIIFFQGDQLKTRVMKIcegkklssvv
Low Complexity Region (SEG)
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSVV
Disordered region (IsUnstruct)
****ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE********
Disordered Region (DISOPRED)
MPAFERMLWRACRGNVFLRQAEIETPLE**NSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSVV
Disordered Region (DISEMBL)
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSVV
Disordered Region (DISPRO)
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
A1A5G6	837	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	1e-23
Q9Z1G4	839	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	2e-23
Q29466	838	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	3e-23
Q9I8D0	838	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	3e-23
P25286	838	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	3e-23
Q93050	837	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	3e-23
Q5R422	837	V-type proton ATPase 116	yes	N/A	0.955	0.076	0.781	3e-23
Q8AVM5	831	V-type proton ATPase 116	N/A	N/A	0.955	0.077	0.765	4e-23
P30628	905	Probable V-type proton AT	yes	N/A	0.895	0.066	0.733	1e-20
Q9HBG4	840	V-type proton ATPase 116	no	N/A	0.895	0.071	0.516	8e-15

>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.
Xenopus tropicalis (taxid: 8364)

>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 187 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 246

Query: 61  KKLS 64
            + S
Sbjct: 247 FRAS 250

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Mus musculus (taxid: 10090)

>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Bos taurus (taxid: 9913)

>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Gallus gallus (taxid: 9031)

>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Rattus norvegicus (taxid: 10116)

>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Homo sapiens (taxid: 9606)

>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Pongo abelii (taxid: 9601)

>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/64 (76%), Positives = 54/64 (84%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +P FERMLWR CRGNVFLRQA+IE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAQIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEG 239

Query: 61  KKLS 64
            + S
Sbjct: 240 FRAS 243

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus laevis (taxid: 8355)

>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 50/60 (83%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFER+LWRACRGNVFLR +EI+  L D  +GDPV K VFIIFFQGD LKT+V KICEG
Sbjct: 216 LPAFERLLWRACRGNVFLRTSEIDDVLNDTVTGDPVNKCVFIIFFQGDHLKTKVKKICEG 275

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 49/60 (81%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           M +FER+LWR CRGNV+L+ +E++ PLED  + + + K++FIIF+QG+QL+ ++ KIC+G
Sbjct: 182 MASFERLLWRICRGNVYLKFSEMDAPLEDPVTKEEIQKNIFIIFYQGEQLRQKIKKICDG 241

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
332024224	920	Putative V-type proton ATPase 116 kDa su	0.895	0.065	0.9	8e-25
332374848	861	unknown [Dendroctonus ponderosae]	0.895	0.069	0.9	9e-25
307174029	914	Vacuolar proton translocating ATPase 116	0.895	0.065	0.9	9e-25
307213911	894	Vacuolar proton translocating ATPase 116	0.895	0.067	0.9	9e-25
322797673	677	hypothetical protein SINV_13591 [Solenop	0.895	0.088	0.9	9e-25
270002498	708	hypothetical protein TcasGA2_TC004569 [T	0.895	0.084	0.9	1e-24
91076248	833	PREDICTED: similar to vacuolar proton AT	0.895	0.072	0.9	1e-24
242003711	833	vacuolar proton translocating ATPase 116	0.895	0.072	0.9	2e-24
156548602	844	PREDICTED: V-type proton ATPase 116 kDa	0.895	0.071	0.883	3e-24
156548598	839	PREDICTED: V-type proton ATPase 116 kDa	0.895	0.071	0.883	3e-24

>gi|332024224|gb|EGI64428.1| Putative V-type proton ATPase 116 kDa subunit a [Acromyrmex echinatior]

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 266 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 325

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374848|gb|AEE62565.1| unknown [Dendroctonus ponderosae]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 197 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 256

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307174029|gb|EFN64732.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Camponotus floridanus]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 260 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 319

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213911|gb|EFN89158.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Harpegnathos saltator]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 237 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 296

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322797673|gb|EFZ19682.1| hypothetical protein SINV_13591 [Solenopsis invicta]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1  MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
          +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 11 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 70

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002498|gb|EEZ98945.1| hypothetical protein TcasGA2_TC004569 [Tribolium castaneum]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 55  IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 114

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076248|ref|XP_966700.1| PREDICTED: similar to vacuolar proton ATPase [Tribolium castaneum]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEG
Sbjct: 181 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEG 240

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003711|ref|XP_002422831.1| vacuolar proton translocating ATPase 116 kDa subunit A isoform, putative [Pediculus humanus corporis] gi|212505701|gb|EEB10093.1| vacuolar proton translocating ATPase 116 kDa subunit A isoform, putative [Pediculus humanus corporis]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED +SGD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct: 181 VPAFERMLWRACRGNVFLRQAEIETPLEDPSSGDQVFKSVFIIFFQGDQLKTRVKKICEG 240

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548602|ref|XP_001607818.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 4 [Nasonia vitripennis]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct: 186 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVHKSVFIIFFQGDQLKTRVKKICEG 245

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548598|ref|XP_001607798.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Nasonia vitripennis]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           +PAFERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct: 181 IPAFERMLWRACRGNVFLRQAEIETPLEDPSTGDQVHKSVFIIFFQGDQLKTRVKKICEG 240

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
FB|FBgn0028671	855	Vha100-1 "Vacuolar H[+] ATPase	0.895	0.070	0.866	1.3e-22
UNIPROTKB|K7EPG4	198	ATP6V0A1 "V-type proton ATPase	0.955	0.323	0.781	3.4e-22
UNIPROTKB|B7Z641	788	ATP6V0A1 "cDNA FLJ54439, highl	0.955	0.081	0.781	4.4e-21
UNIPROTKB|B7Z2A9	794	ATP6V0A1 "V-type proton ATPase	0.955	0.080	0.781	4.5e-21
UNIPROTKB|F1PVS8	801	ATP6V0A1 "Uncharacterized prot	0.955	0.079	0.781	4.6e-21
UNIPROTKB|F1NLH4	802	ATP6V0A1 "V-type proton ATPase	0.955	0.079	0.781	4.6e-21
UNIPROTKB|E1C8Q5	808	ATP6V0A1 "V-type proton ATPase	0.955	0.079	0.781	4.6e-21
UNIPROTKB|F1MH43	832	LOC785923 "Uncharacterized pro	0.955	0.076	0.781	4.9e-21
UNIPROTKB|F1S1D6	832	LOC100523018 "Uncharacterized	0.955	0.076	0.781	4.9e-21
UNIPROTKB|F5H569	837	ATP6V0A1 "V-type proton ATPase	0.955	0.076	0.781	4.9e-21

FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)]

 Score = 273 (101.2 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 52/60 (86%), Positives = 55/60 (91%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +PAFERMLWRACRGNVFLRQA IETPLED  +GD V+KSVFIIFFQGDQLKTRV KICEG
Sbjct:   205 LPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVKKICEG 264

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0045202 "synapse" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0051452 "intracellular pH reduction" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0048388 "endosomal lumen acidification" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009881 "photoreceptor activity" evidence=IMP

UNIPROTKB|K7EPG4 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   121 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 180

Query:    61 KKLS 64
              + S
Sbjct:   181 FRAS 184

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|B7Z641 ATP6V0A1 "cDNA FLJ54439, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 258 (95.9 bits), Expect = 4.4e-21, P = 4.4e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   137 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 196

Query:    61 KKLS 64
              + S
Sbjct:   197 FRAS 200

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|B7Z2A9 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 258 (95.9 bits), Expect = 4.5e-21, P = 4.5e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   137 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 196

Query:    61 KKLS 64
              + S
Sbjct:   197 FRAS 200

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|F1PVS8 ATP6V0A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F1NLH4 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Gallus gallus (taxid:9031)]

 Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|E1C8Q5 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Gallus gallus (taxid:9031)]

 Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 258 (95.9 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F1S1D6 LOC100523018 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 258 (95.9 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F5H569 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 258 (95.9 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)

Query:     1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
             +P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct:   180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239

Query:    61 KKLS 64
              + S
Sbjct:   240 FRAS 243

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W4S4	VHAA3_ARATH	No assigned EC number	0.5087	0.8507	0.0694	yes	N/A
Q9Z1G4	VPP1_MOUSE	No assigned EC number	0.7812	0.9552	0.0762	yes	N/A
Q93050	VPP1_HUMAN	No assigned EC number	0.7812	0.9552	0.0764	yes	N/A
Q9I8D0	VPP1_CHICK	No assigned EC number	0.7812	0.9552	0.0763	yes	N/A
P30628	VPP1_CAEEL	No assigned EC number	0.7333	0.8955	0.0662	yes	N/A
A1A5G6	VPP1_XENTR	No assigned EC number	0.7812	0.9552	0.0764	yes	N/A
Q29466	VPP1_BOVIN	No assigned EC number	0.7812	0.9552	0.0763	yes	N/A
P25286	VPP1_RAT	No assigned EC number	0.7812	0.9552	0.0763	yes	N/A
Q5R422	VPP1_PONAB	No assigned EC number	0.7812	0.9552	0.0764	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	67
pfam01496	707	pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni	6e-14

>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family

 Score = 63.9 bits (156), Expect = 6e-14
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 8/60 (13%)

Query: 1   MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
           + AFER LWRACRG  ++RQAEIE PLED        K+VFIIFF G +   +V KI + 
Sbjct: 154 LEAFERELWRACRG--YIRQAEIEEPLEDPK------KTVFIIFFVGKEDLDKVKKILDS 205

This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
KOG2189|consensus	829		99.96
PF01496	759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	99.31
PF08793	37	2C_adapt: 2-cysteine adaptor domain; InterPro: IPR	87.83

>KOG2189|consensus

Probab=99.96  E-value=1.2e-29  Score=191.48  Aligned_cols=65  Identities=62%  Similarity=1.128  Sum_probs=64.1

Q ss_pred             hhHHHHHHHhhCCcEEEEeeecCCcccCCCCCCceeeEEEEEEEecHHHHHHHHHhhhhcCCeee
Q psy511            2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSV   66 (67)
Q Consensus         2 ~~fer~lwR~~RGN~~~~~~~i~~~~~d~~~~~~~~k~vFiv~~~G~~l~~Ki~KIc~~f~a~~~   66 (67)
                      ++|||+|||+||||+|+++.++|+++.||+|||+++|+|||||||||++++||+||||||||++|
T Consensus       186 ~~fER~LWRa~Rgn~f~r~~~ie~~l~dp~Tge~~~K~vFivF~~Geql~~kIkKIcd~f~a~~y  250 (829)
T KOG2189|consen  186 FAFERMLWRACRGNLFIRQSDIEEPLEDPKTGEPVEKNVFIVFFQGEQLKQKIKKICDGFGATLY  250 (829)
T ss_pred             HHHHHHHHHHhccceEEEeecccccccCCccCCcceeEEEEEEeecHHHHHHHHHHHhccCcEee
Confidence            68999999999999999999999999999999999999999999999999999999999999998

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.31  E-value=9.9e-13  Score=99.67  Aligned_cols=63  Identities=46%  Similarity=0.805  Sum_probs=44.4

Q ss_pred             hhHHHHHHHhhCCcEEEEeeecCCcccCCCCCCceeeEEEEEEEecHHHHHHHHHhhhhcCCeee
Q psy511            2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSV   66 (67)
Q Consensus         2 ~~fer~lwR~~RGN~~~~~~~i~~~~~d~~~~~~~~k~vFiv~~~G~~l~~Ki~KIc~~f~a~~~   66 (67)
                      ++|+|+|||+++||+|+++.+++++..|+.  +.++|.+|+++++|++..+|++|||+++|++.|
T Consensus       156 ~~f~~~l~r~~~~N~fi~~~~Ie~~~~d~~--e~~~k~v~vv~~~~~~~~~kv~~il~~~~f~~~  218 (759)
T PF01496_consen  156 ESFERILWRATRGNIFIRFSEIEEILEDPK--EEVEKEVFVVFFSGKELEEKVKKILRSFGFERY  218 (759)
T ss_dssp             HHHHHHHHHHHTT-----S------EEEE---EE-SSSEEEEEEEEGGGHHHHHHHHHTTT--B-
T ss_pred             HHHHHHHHHhccCCeEEEEEeeeccccccc--ceeeeeeEEEEEEchhhHHHHHHHhhccCceec
Confidence            579999999999999999999999988877  778899999999999999999999999999876

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the 116kDa subunit (or subunit a) and subunit I found in the V0 or A0 complex of V- or A-ATPases, respectively. The 116kDa subunit is a transmembrane glycoprotein required for the assembly and proton transport activity of the ATPase complex. Several isoforms of the 116kDa subunit exist, providing a potential role in the differential targeting and regulation of the V-ATPase for specific organelles []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033177 proton-transporting two-sector ATPase complex, proton-transporting domain; PDB: 2RPW_X 2NVJ_A 2JTW_A 3RRK_A.

>PF08793 2C_adapt: 2-cysteine adaptor domain; InterPro: IPR014901 The virus-specific 2-cysteine adaptor is found fused to OTU/A20-like peptidases and S/T protein kinases

Probab=87.83  E-value=0.61  Score=23.40  Aligned_cols=28  Identities=21%  Similarity=0.434  Sum_probs=23.1

Q ss_pred             CcccCCCCCCceeeEEEEEEEecHHHHHHHHHhhhh
Q psy511           25 TPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG   60 (67)
Q Consensus        25 ~~~~d~~~~~~~~k~vFiv~~~G~~l~~Ki~KIc~~   60 (67)
                      ++..+|.||.++..        |..+.+++.|.|++
T Consensus         9 np~~NP~Tgr~Ik~--------~gp~y~~l~~~C~~   36 (37)
T PF08793_consen    9 NPTVNPITGRKIKP--------GGPTYKKLVKECGG   36 (37)
T ss_pred             CCCCCCCCCCcCCC--------CChHHHHHHHHcCC
Confidence            44578899988765        88999999999986

The associations to these proteins indicate that they might function as viral adaptors connecting the kinases and OTU/A20 peptidases to specific targets [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	97.83

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=97.83  E-value=4.9e-05  Score=51.97  Aligned_cols=52  Identities=10%  Similarity=0.017  Sum_probs=39.5

Q ss_pred             hhHHHHHHHhhCCcEEEEeeecCCcccCCCCCCceeeEEEEEEEecHHHHHHHHHhhhhcCCeee
Q psy511            2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGKKLSSV   66 (67)
Q Consensus         2 ~~fer~lwR~~RGN~~~~~~~i~~~~~d~~~~~~~~k~vFiv~~~G~~l~~Ki~KIc~~f~a~~~   66 (67)
                      ..|++.|||+++|..+....            +...+++|+++++ ....++|++||+++|++.|
T Consensus       162 ~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~vv~~~-~~~~~~v~~il~s~~f~~~  213 (357)
T 3rrk_A          162 EAVRKALQEALADRFVLEAE------------PLENQLAALVVVK-RSELEAARSSLSRLGLAEL  213 (357)
T ss_dssp             HHHHHHHHHHHTTSCEEEEE------------ECSSSEEEEEEEE-GGGHHHHHHHHHTTTCCBC
T ss_pred             HHHHHHHHHhcCCeEEEEee------------cCCCcEEEEEEEE-HHHHHHHHHHHHHCCCeec
Confidence            47899999999995443221            1125788999996 5577899999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00