Psyllid ID: psy5201

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MYSHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQESYPYRRPDS
Secondary Structure (PSIPRED)
ccccccHHHHccccccccHHHHHccccHHHccccccccccccHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHcccccccccccccccccccccccccccHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEEEEHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHccccccccccccccHHHHHHHHHHHHccccccccHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHccccEEEHEEEEEccHHHHccHccccccccEEEEEcHHHcccHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
myshlcscmktntfnsksAFFLFNrtglccnqryssgqdhtHYEILElerncspkEIRSAFIRLSkqfhpdknpsnpalhDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHktrarssysdsgerpenwKDYYDFAAQMkrnesihvpkfLHKFETLSKATLVMLLIGVATGALGLQILAVQysktfprnvvnSREMEISQNLMNArndakkydlQENIDRFAKRYqesypyrrpds
Flexible Loop (DISEMBL)
MYSHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQfhpdknpsnpalhDKFVKLNEAYSILNDMDRRRNYDASlnlqtvrqnmfvhktrarssysdsgerpeNWKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMnarndakkydlQENIDRFakryqesypyrrpds
Low Complexity Region (SEG)
MYSHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQESYPYRRPDS
Disordered region (IsUnstruct)
****LCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRL****************DKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFV******************WKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVV*********************************************
Disordered Region (DISOPRED)
**********TNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASL**************************PENWKDY*************************SKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNA*******************************
Disordered Region (DISEMBL)
MYSHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVH**************PENWKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQESYPYRRPDS
Disordered Region (DISPRO)
**SHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPK**H**ETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQESYPY*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYSHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQESYPYRRPDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
Q9D844	244	DnaJ homolog subfamily C	yes	N/A	0.270	0.270	0.5	4e-13
A4XKA5	387	Chaperone protein DnaJ OS	yes	N/A	0.270	0.170	0.484	5e-13
P92029	217	DnaJ-like protein 60 OS=D	yes	N/A	0.75	0.843	0.271	5e-13
Q9DC23	793	DnaJ homolog subfamily C	no	N/A	0.434	0.133	0.344	2e-12
Q498R3	793	DnaJ homolog subfamily C	no	N/A	0.377	0.116	0.361	2e-12
B9MJZ0	388	Chaperone protein DnaJ OS	yes	N/A	0.270	0.170	0.469	3e-12
Q8IXB1	793	DnaJ homolog subfamily C	yes	N/A	0.377	0.116	0.361	3e-12
Q9NNZ3	241	DnaJ homolog subfamily C	no	N/A	0.315	0.319	0.412	6e-12
Q5R5L3	793	DnaJ homolog subfamily C	no	N/A	0.377	0.116	0.351	8e-12
O08356	379	Chaperone protein DnaJ OS	N/A	N/A	0.254	0.163	0.467	9e-12

>sp|Q9D844|DNJC4_MOUSE DnaJ homolog subfamily C member 4 OS=Mus musculus GN=Dnajc4 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (71%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L +    S +EI+ AF   SK+ HPD++P NPALH +FV+LNEAY +L+  + RRN
Sbjct: 38  YYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELNEAYRVLSREESRRN 97

Query: 102 YDASLN 107
           YD  L+
Sbjct: 98  YDHQLH 103

Mus musculus (taxid: 10090)

>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1

 Score = 75.1 bits (183), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 47/66 (71%)

Query: 38  QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMD 97
           Q   +YEIL + RN + +EI+ A+ RL+KQ+HPD NP N    +KF ++NEAY +L+D +
Sbjct: 3   QKKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPE 62

Query: 98  RRRNYD 103
           +RR YD
Sbjct: 63  KRRKYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) (taxid: 351627)

>sp|P92029|DNJ60_DROME DnaJ-like protein 60 OS=Drosophila melanogaster GN=DnaJ-60 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 16/199 (8%)

Query: 40  HTHYEILELERNCSPKEIRSAFIRLSKQFHPD--KNPSNPALHDKFVKLNEAYSILNDMD 97
            THYE+L +  +CS +E+R+AF++LSK +HPD   N + P    +FV+++EAY  L   +
Sbjct: 25  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 84

Query: 98  RRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKF 157
           RRR+YD SL  Q  R +        RS   ++    + W    ++         I   K 
Sbjct: 85  RRRDYDDSLLWQPSRSD--------RSPVGETVNPGQAWDVRPNYDPNPGPYYGIRGLKR 136

Query: 158 LHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDA 217
           +  ++      +V++ +G      G    +V+ S    R + +    E + +      DA
Sbjct: 137 VSNWQV----AVVLMALGFVGALFGF--TSVRSSFKLSRQIQDEISAEANSHHAAVVADA 190

Query: 218 KKYDLQENIDRFAKRYQES 236
           +KY  +E + R   R   S
Sbjct: 191 QKYGNEEQVRRMVDRMSRS 209

May play an important function during spermatogenesis and/or in the male genital tract.

Drosophila melanogaster (taxid: 7227)

>sp|Q9DC23|DJC10_MOUSE DnaJ homolog subfamily C member 10 OS=Mus musculus GN=Dnajc10 PE=1 SV=2

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 19/125 (15%)

Query: 23  FNRTGLCCNQRYSS---GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL 79
             R  LC    Y     G D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  
Sbjct: 14  LKRISLCLLILYVVVVVGTDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNA 73

Query: 80  HDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY 139
           H  F+K+N AY +L D D R+ YD               K   +    + G + E+W  Y
Sbjct: 74  HGDFLKINRAYEVLKDEDLRKKYD---------------KYGEKGLEDNQGGQYESWSYY 118

Query: 140 -YDFA 143
            YDF 
Sbjct: 119 RYDFG 123

This endoplasmic reticulum co-chaperone may play a role in protein folding and translocation across the endoplasmic reticulum membrane. May be involved in disulfide formation. May act as a co-chaperone for Hspa5.

Mus musculus (taxid: 10090)

>sp|Q498R3|DJC10_RAT DnaJ homolog subfamily C member 10 OS=Rattus norvegicus GN=Dnajc10 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 16/108 (14%)

Query: 37  GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDM 96
           G D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D 
Sbjct: 31  GTDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE 90

Query: 97  DRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY-YDFA 143
           D R+ YD               K   +    + G + E+W  Y YDF 
Sbjct: 91  DLRKKYD---------------KYGEKGLEDNQGGQYESWSYYRYDFG 123

This endoplasmic reticulum co-chaperone may play a role in protein folding and translocation across the endoplasmic reticulum membrane. May be involved in disulfide formation. May act as a co-chaperone for Hspa5.

Rattus norvegicus (taxid: 10116)

>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 47/66 (71%)

Query: 38  QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMD 97
           Q   +YEIL + RN + +EI+ A+ RL+KQ+HPD NP N    +KF ++NEAY +L+D +
Sbjct: 3   QKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPE 62

Query: 98  RRRNYD 103
           +R+ YD
Sbjct: 63  KRKLYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Anaerocellum thermophilum (strain DSM 6725 / Z-1320) (taxid: 521460)

>sp|Q8IXB1|DJC10_HUMAN DnaJ homolog subfamily C member 10 OS=Homo sapiens GN=DNAJC10 PE=1 SV=2

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 16/108 (14%)

Query: 37  GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDM 96
           G D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D 
Sbjct: 31  GTDQDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE 90

Query: 97  DRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY-YDFA 143
           D R+ YD               K   +    + G + E+W  Y YDF 
Sbjct: 91  DLRKKYD---------------KYGEKGLEDNQGGQYESWNYYRYDFG 123

This endoplasmic reticulum co-chaperone may play a role in protein folding and translocation across the endoplasmic reticulum membrane. May act as a co-chaperone for HSPA5.

Homo sapiens (taxid: 9606)

>sp|Q9NNZ3|DNJC4_HUMAN DnaJ homolog subfamily C member 4 OS=Homo sapiens GN=DNAJC4 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)

Query: 27  GLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKL 86
           G    QR    +  T+YE+L +    S +E++ AF   SK+ HPD++P NP+LH +FV+L
Sbjct: 23  GAAAGQR---SRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVEL 79

Query: 87  NEAYSILNDMDRRRNYDASL 106
           +EAY +L+    RR+YD  L
Sbjct: 80  SEAYRVLSREQSRRSYDDQL 99

Homo sapiens (taxid: 9606)

>sp|Q5R5L3|DJC10_PONAB DnaJ homolog subfamily C member 10 OS=Pongo abelii GN=DNAJC10 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 16/108 (14%)

Query: 37  GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDM 96
           G +   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D 
Sbjct: 31  GTEQDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGNFLKINRAYEVLKDE 90

Query: 97  DRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY-YDFA 143
           D R+ YD               K   +    + G + E+W  Y YDF 
Sbjct: 91  DLRKKYD---------------KYGEKGLEDNQGGQYESWNYYRYDFG 123

This endoplasmic reticulum co-chaperone may play a role in protein folding and translocation across the endoplasmic reticulum membrane. May be involved in disulfide formation. May act as a co-chaperone for HSPA5.

Pongo abelii (taxid: 9601)

>sp|O08356|DNAJ_RHOS7 Chaperone protein DnaJ OS=Rhodopseudomonas sp. (strain No.7) GN=dnaJ PE=3 SV=1

 Score = 70.9 bits (172), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE LE+ERN     ++SAF +L+ ++HPD+NP +P    KF ++NEAY +L D D+R  
Sbjct: 8   YYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAA 67

Query: 102 YD 103
           YD
Sbjct: 68  YD 69

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Rhodopseudomonas sp. (strain No.7) (taxid: 269092)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
291226784	241	PREDICTED: heat shock 40kD protein 2-lik	0.75	0.759	0.293	3e-14
157128319	206	hypothetical protein AaeL_AAEL011082 [Ae	0.688	0.815	0.321	3e-14
157128317	214	hypothetical protein AaeL_AAEL011082 [Ae	0.639	0.728	0.324	8e-14
158284554	210	Anopheles gambiae str. PEST AGAP012747-P	0.700	0.814	0.314	1e-13
157110135	214	hypothetical protein AaeL_AAEL015218 [Ae	0.639	0.728	0.319	2e-13
300813384	310	DnaJ domain protein [Peptoniphilus sp. o	0.5	0.393	0.344	3e-13
357617592	214	DnaJ-like protein 13 [Danaus plexippus]	0.762	0.869	0.295	5e-13
47225277	234	unnamed protein product [Tetraodon nigro	0.782	0.816	0.254	5e-13
282881947	310	chaperone protein DnaJ [Peptoniphilus la	0.5	0.393	0.336	6e-13
326428328	683	molecular chaperone DnaJ [Salpingoeca sp	0.278	0.099	0.514	2e-12

>gi|291226784|ref|XP_002733359.1| PREDICTED: heat shock 40kD protein 2-like [Saccoglossus kowalevskii]

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 18/201 (8%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           HY++L + +N S   I+ A+ + SK  HPD  PS+P+ H KF++L  AYS+L+    RR+
Sbjct: 36  HYDVLGISKNSSRDIIKEAYFKKSKLLHPDAKPSDPSQHQKFIELTNAYSVLSKPLSRRD 95

Query: 102 YDASLNLQTVRQNMF---VHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFL 158
           YD  L LQ VR + +   VH+T     +  +GE   +  DYY F+     N  +H     
Sbjct: 96  YD--LELQGVRVSPYRVHVHRTSTSHPFGSTGEYASH--DYYGFSNDP--NVGVH----Y 145

Query: 159 HKFETLSKATLVMLLIG----VATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNAR 214
           +  + + K + + ++IG    +   ALG  IL + Y   F    ++ R+ +IS+     +
Sbjct: 146 YGIKGIRKVSNMTIMIGCVILLVVSALGHFIL-LHYGAQFTARQLDERDRKISKIYSEVK 204

Query: 215 NDAKKYDLQENIDRFAKRYQE 235
             A++   ++ ++   + Y+E
Sbjct: 205 RRARENGPKKQMELLRQNYEE 225

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|157128319|ref|XP_001661399.1| hypothetical protein AaeL_AAEL011082 [Aedes aegypti]

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 34/202 (16%)

Query: 28  LCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFV 84
           L C  RY+      HYE+L+L+ NC+PKEIR AFIRLSK+ HPD N SN    A    FV
Sbjct: 7   LLCVVRYA--HRINHYEVLKLQSNCTPKEIREAFIRLSKELHPDVNASNGNKKANEKSFV 64

Query: 85  KLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAA 144
           +L EAY +L+  D R +YD  L +            +AR      G +    + +Y  +A
Sbjct: 65  QLLEAYKVLSKPDSRSSYDYELAM------------KARPQSHPGGNQNIQNQHWYPNSA 112

Query: 145 QMKRNESIHVPKFLHKFETLSKAT--------LVMLLIGVATGALGLQILAVQYSKTFPR 196
             +  +    P   + F+ + K +        LV + +G+      +Q  A+  S TF R
Sbjct: 113 HYQEPD----PNSFYGFKGIKKVSNWTIVFYCLVFMFVGII-----VQAYAISKSFTFSR 163

Query: 197 NVVNSREMEISQNLMNARNDAK 218
             ++      SQ L  AR +A+
Sbjct: 164 EQLDEDSRRNSQMLAKARAEAQ 185

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157128317|ref|XP_001661398.1| hypothetical protein AaeL_AAEL011082 [Aedes aegypti] gi|108872643|gb|EAT36868.1| AAEL011082-PA [Aedes aegypti]

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 32/188 (17%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDR 98
           HYE+L+L+ NC+PKEIR AFIRLSK+ HPD N SN    A    FV+L EAY +L+  D 
Sbjct: 27  HYEVLKLQSNCTPKEIREAFIRLSKELHPDVNASNGNKKANEKSFVQLLEAYKVLSKPDS 86

Query: 99  RRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFL 158
           R +YD  L +            +AR      G +    + +Y  +A  +  +    P   
Sbjct: 87  RSSYDYELAM------------KARPQSHPGGNQNIQNQHWYPNSAHYQEPD----PNSF 130

Query: 159 HKFETLSKAT--------LVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNL 210
           + F+ + K +        LV + +G+      +Q  A+  S TF R  ++      SQ L
Sbjct: 131 YGFKGIKKVSNWTIVFYCLVFMFVGII-----VQAYAISKSFTFSREQLDEDSRRNSQML 185

Query: 211 MNARNDAK 218
             AR +A+
Sbjct: 186 AKARAEAQ 193

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158284554|ref|XP_307339.3| Anopheles gambiae str. PEST AGAP012747-PA [Anopheles gambiae str. PEST] gi|158299180|ref|XP_319298.3| AGAP010141-PA [Anopheles gambiae str. PEST] gi|157014242|gb|EAA14004.3| AGAP010141-PA [Anopheles gambiae str. PEST] gi|157021014|gb|EAA03148.3| AGAP012747-PA [Anopheles gambiae str. PEST]

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 41  THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDK--FVKLNEAYSILNDMDR 98
           THY +L+L+ NCS +++R+AFI+LSK+ HPD N SN A +DK  FV+L EAY +L+  + 
Sbjct: 22  THYNVLKLQPNCSARDVRTAFIQLSKELHPDANVSNQAKYDKKSFVELLEAYKVLSKPES 81

Query: 99  RRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKF- 157
           R  YD  L+L     N         S+Y     RP        +AA      +   P + 
Sbjct: 82  RAAYDYELSLSKNPGNQVYVNLLTNSTY-----RP--------WAANTMHYSNEEQPYYG 128

Query: 158 LHKFETLSKATLVM-----LLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMN 212
           +   + +S  T+V+     +L+G+      LQ +A+  S TF R+ ++    + +     
Sbjct: 129 IKGVKKVSNWTIVLCCGIFMLVGIV-----LQAVAINKSFTFQRDQLDEYSRQNAITHAE 183

Query: 213 ARNDAKKYDLQENIDRF 229
            R +A+KY  +  I+R 
Sbjct: 184 VREEAEKYGNKAQIERM 200

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157110135|ref|XP_001650966.1| hypothetical protein AaeL_AAEL015218 [Aedes aegypti] gi|108868387|gb|EAT32612.1| AAEL015218-PA [Aedes aegypti]

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 32/188 (17%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDR 98
           HYE+L+L+ NC+PKEIR AFI+LSK+ HPD N SN    A    FV+L EAY +L+  D 
Sbjct: 27  HYEVLKLQSNCTPKEIREAFIKLSKELHPDVNASNGNKKANEKSFVQLLEAYKVLSKPDS 86

Query: 99  RRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFL 158
           R +YD  L +            +AR      G +    + +Y  +A  +  +    P   
Sbjct: 87  RSSYDYELAM------------KARPQSHPGGNQNIQNQHWYPNSAHYQAPD----PNSF 130

Query: 159 HKFETLSKAT--------LVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNL 210
           + F+ + K +        LV + +G+      +Q  A+  S TF R  ++      SQ L
Sbjct: 131 YGFKGIKKVSNWTIVFYCLVFMFVGII-----VQAYAISKSFTFSREQLDEDSRRNSQML 185

Query: 211 MNARNDAK 218
             AR +A+
Sbjct: 186 AKARAEAQ 193

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|300813384|ref|ZP_07093735.1| DnaJ domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512527|gb|EFK39676.1| DnaJ domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+IL +++N SPKEI+SAF +L+K++HPD NP++P   +KF ++NEAY +L+D D++  
Sbjct: 6   YYKILGVDKNSSPKEIKSAFRKLAKKYHPDLNPNDPKAQEKFKEINEAYEVLSDKDKKAK 65

Query: 102 YDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYD--FAAQMKRNESIHVPKFLH 159
           YDA  +            +    +Y+ +G   E++ D++D  F +  +R  S    KF  
Sbjct: 66  YDAFGSNYDFSGGYNFDPSAYGYTYT-TGGSSEDFSDFFDMIFGSNARRASSAKGSKFSF 124

Query: 160 KFETL 164
             + L
Sbjct: 125 NLDDL 129

Source: Peptoniphilus sp. oral taxon 836 str. F0141

Species: Peptoniphilus sp. oral taxon 836

Genus: Peptoniphilus

Family: Clostridiales Family XI. Incertae Sedis

Order: Clostridiales

Class: Clostridia

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|357617592|gb|EHJ70876.1| DnaJ-like protein 13 [Danaus plexippus]

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)

Query: 21  FLFNR-----TGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPS 75
           +LF R       +C   +  S    +HYE+L + +NC+ KEI+ AFI+LSK++HPDKN S
Sbjct: 2   YLFKRQRPDLKAICTLVQKFSIAKKSHYEVLNVRKNCTEKEIKDAFIKLSKEYHPDKNKS 61

Query: 76  NPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPEN 135
           + A   +FV++ EAY++L+    R  YD  LN      N  V+KT     Y         
Sbjct: 62  SQA-QQQFVEIVEAYNVLSKPGSRSRYD--LNSHHT-SNSNVYKTYPSYDY--------K 109

Query: 136 WKDYYDFAAQMKRNESIHVPKF-------LHKFETLSKATLVMLLIGVATGALGLQILAV 188
           +K Y +       N +             L     +    ++M+  GVA   L LQIL +
Sbjct: 110 YKAYSNQYYNNYTNNNSTNQNQTSDAYYGLKGIRKVPNVVIIMICFGVAIVGLFLQILVI 169

Query: 189 QYSKTFPRNVVNSREMEISQNLMNARNDAK 218
             S  F R  ++ + + +++ L   R  A+
Sbjct: 170 SRSYHFHRKRIDEKSIRLAEELEKVRASAR 199

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47225277|emb|CAG09777.1| unnamed protein product [Tetraodon nigroviridis]

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 33/224 (14%)

Query: 28  LCCNQR----YSSGQDH----THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL 79
            CC +      S G  H     +YE+L ++ N    EI+ AF   SK+ HPD++P+NPAL
Sbjct: 14  FCCWKSGLRLLSQGSSHRKAVNYYELLGVKSNAGLDEIKDAFFEKSKKLHPDRDPANPAL 73

Query: 80  HDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY 139
           H +FV+LNEAY +L+    R+ YD  L  Q   Q      + A S+Y+  G R   W+ +
Sbjct: 74  HSQFVELNEAYRVLSKDSSRKEYDVKL-AQPYAQGQAFSSSSAHSTYTSGGNR-RYWEQF 131

Query: 140 YDFAA--------QMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYS 191
               A        Q +R  ++H+  +           + MLL      ++G+ ++  +  
Sbjct: 132 RQAPAQEVSAEQWQRRRRRNLHLVGY---------CVIAMLL------SIGVHVIFFRKL 176

Query: 192 KTFPRNVVNSREMEISQNLMNARNDAKKYDLQENIDRFAKRYQE 235
           +    N ++ ++  I++    ++  A+    ++ ++   +++QE
Sbjct: 177 EEVHNNFMDEKDRVITEIYKESKERARANGFRKQMEILRQKHQE 220

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|282881947|ref|ZP_06290592.1| chaperone protein DnaJ [Peptoniphilus lacrimalis 315-B] gi|281298222|gb|EFA90673.1| chaperone protein DnaJ [Peptoniphilus lacrimalis 315-B]

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+IL +++N SPKEI+SAF +L+K++HPD NP++P   +KF ++NEAY +L+D D++  
Sbjct: 6   YYKILGVDKNSSPKEIKSAFRKLAKKYHPDLNPNDPKAQEKFKEINEAYEVLSDKDKKAK 65

Query: 102 YDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYD--FAAQMKRNESIHVPKFLH 159
           YDA  +            +    +Y+ +G   E++ D++D  F +  +R  S    +F  
Sbjct: 66  YDAFGSNYDFSGGYNFDPSAYGYTYT-TGGSSEDFSDFFDMIFGSNARRASSAKGSRFSF 124

Query: 160 KFETL 164
             + L
Sbjct: 125 NLDDL 129

Source: Peptoniphilus lacrimalis 315-B

Species: Peptoniphilus lacrimalis

Genus: Peptoniphilus

Family: Clostridiales Family XI. Incertae Sedis

Order: Clostridiales

Class: Clostridia

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|326428328|gb|EGD73898.1| molecular chaperone DnaJ [Salpingoeca sp. ATCC 50818]

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 47/68 (69%)

Query: 36  SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND 95
           SG   T+YE+LE+    SPKEIR +F +L+ + HPDKNP +P  HDKFV+LN A+ +L D
Sbjct: 26  SGSSQTYYELLEVNVEASPKEIRRSFKKLALRLHPDKNPGDPEAHDKFVQLNAAFEVLKD 85

Query: 96  MDRRRNYD 103
              R+ YD
Sbjct: 86  PKLRKIYD 93

Source: Salpingoeca sp. ATCC 50818

Species: Salpingoeca sp. ATCC 50818

Genus: Salpingoeca

Family: Salpingoecidae

Order: Choanoflagellida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
UNIPROTKB|F1PC60	238	DNAJC4 "Uncharacterized protei	0.762	0.781	0.297	9.5e-18
UNIPROTKB|F1MMI8	241	DNAJC4 "Uncharacterized protei	0.770	0.780	0.298	1.4e-16
UNIPROTKB|Q9NNZ3	241	DNAJC4 "DnaJ homolog subfamily	0.844	0.854	0.274	3.7e-16
UNIPROTKB|F1RQ04	240	DNAJC4 "Uncharacterized protei	0.721	0.733	0.304	1.6e-15
MGI|MGI:1927346	244	Dnajc4 "DnaJ (Hsp40) homolog,	0.799	0.799	0.268	1.6e-15
RGD|1308693	238	Dnajc4 "DnaJ (Hsp40) homolog,	0.766	0.785	0.278	3.3e-15
FB|FBgn0260775	217	DnaJ-60 "DnaJ-like-60" [Drosop	0.762	0.857	0.280	2.3e-14
CGD|CAL0004972	384	orf19.3438 [Candida albicans (	0.25	0.158	0.508	7.3e-14
UNIPROTKB|E7EP04	275	DNAJC10 "DnaJ homolog subfamil	0.274	0.243	0.462	5.4e-13
ZFIN|ZDB-GENE-070327-1	791	dnajc10 "DnaJ (Hsp40) homolog,	0.356	0.109	0.417	1e-12

UNIPROTKB|F1PC60 DNAJC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 60/202 (29%), Positives = 98/202 (48%)

Query:    33 RYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSI 92
             R  SG    +YE+L +    S +E++ AF   SK+ HPD++P NPALH +FV+L+EAY +
Sbjct:    28 RQRSGP-RNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPALHSRFVELSEAYQV 86

Query:    93 LNDMDRRRNYDASLNLQTVRQN--MFVHKTRARSSYSDSGERP--ENWKDYYDFAAQMKR 148
             L+    RR+YD  L+  T  ++    VH   A  ++S S   P  + W  ++    Q   
Sbjct:    87 LSHEHSRRSYDHQLSSTTPPKSPGTTVHPRAAHQAHSSSWAPPNAQYWAQFHGVRPQGPE 146

Query:   149 NESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQ 208
             +      +  H    L    L+ML        +GL  +A +  +   R+ ++ ++  I+ 
Sbjct:   147 SRQ---QQHRHNQRVLGYCLLIML------AGMGLHYVAFRKLEQMHRSFMDEKDRIITA 197

Query:   209 --NLMNARNDAKKYDLQENIDR 228
               N   AR  A +  LQE + R
Sbjct:   198 IYNDTRARARANRAKLQEQLQR 219

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1MMI8 DNAJC4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 60/201 (29%), Positives = 96/201 (47%)

Query:    33 RYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSI 92
             R  SG  + +YE+L ++   S +E++ AF   SK+ HPD++P NPALH +FV+L+EAY +
Sbjct:    29 RQRSGPSN-YYELLGVQPGASTEEVKRAFFSKSKELHPDRDPGNPALHSRFVELSEAYQV 87

Query:    93 LNDMDRRRNYDASLNLQTVRQN--MFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNE 150
             L+    RR+YD  L      ++     H   A  ++S SG  P N K +  F     +  
Sbjct:    88 LSREQSRRSYDHQLRSAASPKSPGTTAHPRSAHQAHSSSGA-PPNEKYWAQFHKVRPQGP 146

Query:   151 SIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQ-- 208
                  +  H    L    L+ML        +GL  +A +  +   R+ ++ ++  I+   
Sbjct:   147 ESRQQQHKHNRRVLGYCLLIML------AGMGLHYVAFRKLEQLHRSFMDEKDRIITAIY 200

Query:   209 NLMNARNDAKKYDL-QENIDR 228
             N   AR  A +  L QE   R
Sbjct:   201 NDTRARARANRARLLQEQRQR 221

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q9NNZ3 DNAJC4 "DnaJ homolog subfamily C member 4" [Homo sapiens (taxid:9606)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 61/222 (27%), Positives = 104/222 (46%)

Query:    27 GLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKL 86
             G    QR    +  T+YE+L +    S +E++ AF   SK+ HPD++P NP+LH +FV+L
Sbjct:    23 GAAAGQR---SRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVEL 79

Query:    87 NEAYSILNDMDRRRNYDASLNLQTVRQN--MFVHKTRARSSYSDSGERPENWKDYYDFAA 144
             +EAY +L+    RR+YD  L   +  ++    VH   A  ++S     P N + +  F +
Sbjct:    80 SEAYRVLSREQSRRSYDDQLRSGSPPKSPRTTVHDKSAHQTHSSW--TPPNAQYWSQFHS 137

Query:   145 QMKRNESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREM 204
                +   +   +     + L    L+ML        +GL  +A +  K    N ++ ++ 
Sbjct:   138 VRPQGPQLRQQQHKQNKQVLGYCLLLML------AGMGLHYIAFRKVKQMHLNFMDEKDR 191

Query:   205 EISQ--NLMNARNDAKKYDLQENIDRFAKRYQE-SYPYRRPD 243
              I+   N   AR  A +  LQ+   R  +R    S P + P+
Sbjct:   192 IITAFYNEARARARANRGILQQERQRLGQRQPPPSEPTQGPE 233

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=NAS

GO:0016020 "membrane" evidence=NAS

GO:0006457 "protein folding" evidence=NAS

GO:0006986 "response to unfolded protein" evidence=TAS

UNIPROTKB|F1RQ04 DNAJC4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 60/197 (30%), Positives = 98/197 (49%)

Query:    36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND 95
             SG  + +YE+L +    S +E++ AF   SK+ HPD++P NPALH +FV+L+EAY +L+ 
Sbjct:    32 SGPSN-YYELLGVHPGASAEEVKRAFFSKSKELHPDRDPGNPALHSRFVELSEAYQVLSR 90

Query:    96 MDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPEN-WKD----YY-DFAAQMKRN 149
              + RR+YD  L   T        K+   S+Y  S  R  + W+D    Y+  F     + 
Sbjct:    91 EESRRSYDHQLRSATSP------KSPGTSAYPRSAHRAHSSWEDPSARYWAQFPGVRPQG 144

Query:   150 ESIHVPKFLHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQ- 208
               +   +  H   TL    L+ML  G+      L  +A +  +   R+ ++ ++  I+  
Sbjct:   145 PELRRQQQKHNQRTLGYCLLIMLA-GMC-----LHYVAFRKLEQVHRSFMDEKDRIITAI 198

Query:   209 -NLMNARNDAKKYDLQE 224
              N   AR  AK+  LQ+
Sbjct:   199 YNDTRARARAKRARLQQ 215

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1927346 Dnajc4 "DnaJ (Hsp40) homolog, subfamily C, member 4" [Mus musculus (taxid:10090)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 55/205 (26%), Positives = 99/205 (48%)

Query:    42 HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
             +YE+L +    S +EI+ AF   SK+ HPD++P NPALH +FV+LNEAY +L+  + RRN
Sbjct:    38 YYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELNEAYRVLSREESRRN 97

Query:   102 YDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFLHKF 161
             YD  L+  +  ++         +  + S   P N + +  F +   +       +  H  
Sbjct:    98 YDHQLHSASPPKSSGSTAEPKYTQQTHSSWEPPNAQYWAQFHSVRPQGPESRKQQRKHNQ 157

Query:   162 ETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQ--NLMNARNDAKK 219
               L    L+M+        +GL  +A +  +   R+ ++ ++  I+   N   AR  A +
Sbjct:   158 RVLGYCLLLMV------AGMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARARANR 211

Query:   220 YDLQENIDRFAKRYQESYPYRRPDS 244
               +Q+  +R  ++   + P   P+S
Sbjct:   212 ARIQQ--ERQQRQQPRAEPSLPPES 234

GO:0005739 "mitochondrion" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1308693 Dnajc4 "DnaJ (Hsp40) homolog, subfamily C, member 4" [Rattus norvegicus (taxid:10116)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 57/205 (27%), Positives = 99/205 (48%)

Query:    42 HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
             +YE+L +    S +EI+ AF   SK+ HPD++P NPALH +FV+L+EAY +L+  + RRN
Sbjct:    32 YYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELSEAYRVLSREESRRN 91

Query:   102 YDASLNLQTVRQNM--FVHKTRARSSYSDSGERP--ENWKDYYDFAAQMKRNESIHVPKF 157
             YD  L+  +  ++          + ++S   E P  E W  ++    Q   +      K 
Sbjct:    92 YDHQLHSASPSKSSGSTAEPKYKQQTHSSPWETPNAEYWAQFHSVRPQEPESR-----KQ 146

Query:   158 LHKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDA 217
              HK     +     LL+ VA   +GL  +A +  +   R+ ++ ++  I+    + R  A
Sbjct:   147 QHKHN--QRVLGYCLLLMVA--GMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARA 202

Query:   218 KKYDLQENIDRFAKRYQESYPYRRP 242
             +      N  R  +++Q+  P   P
Sbjct:   203 RA-----NRARIQQKHQQRQPPTEP 222

GO:0005739 "mitochondrion" evidence=IEA;ISO

FB|FBgn0260775 DnaJ-60 "DnaJ-like-60" [Drosophila melanogaster (taxid:7227)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 57/203 (28%), Positives = 97/203 (47%)

Query:    41 THYEILELERNCSPKEIRSAFIRLSKQFHPD--KNPSNPALHDKFVKLNEAYSILNDMDR 98
             THYE+L +  +CS +E+R+AF++LSK +HPD   N + P    +FV+++EAY  L   +R
Sbjct:    26 THYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPER 85

Query:    99 RRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMKRNESIHVPKFL 158
             RR+YD SL  Q  R +        RS   ++    + W    ++         I   K +
Sbjct:    86 RRDYDDSLLWQPSRSD--------RSPVGETVNPGQAWDVRPNYDPNPGPYYGIRGLKRV 137

Query:   159 HKFETLSKATLVMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAK 218
               ++      +V++ +G   GAL     +V+ S    R + +    E + +      DA+
Sbjct:   138 SNWQV----AVVLMALGFV-GAL-FGFTSVRSSFKLSRQIQDEISAEANSHHAAVVADAQ 191

Query:   219 KYDLQENIDRFAKRYQESYPYRR 241
             KY  +E + R   R   S P+ +
Sbjct:   192 KYGNEEQVRRMVDRMSRS-PFNQ 213

GO:0016020 "membrane" evidence=ISM

GO:0007283 "spermatogenesis" evidence=IEP;NAS

GO:0006457 "protein folding" evidence=ISS

GO:0051082 "unfolded protein binding" evidence=ISS

CGD|CAL0004972 orf19.3438 [Candida albicans (taxid:5476)]

 Score = 185 (70.2 bits), Expect = 7.3e-14, P = 7.3e-14
 Identities = 31/61 (50%), Positives = 49/61 (80%)

Query:    43 YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
             Y+IL +E++ S KEI+S F +L+ ++HPDKNP++   HDKF+++ EAY +L+D ++RRNY
Sbjct:    25 YQILGVEKSASNKEIKSVFRQLTLKYHPDKNPNDTEAHDKFLEIGEAYEVLSDPEKRRNY 84

Query:   103 D 103
             D
Sbjct:    85 D 85

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0006986 "response to unfolded protein" evidence=IEA

GO:0034975 "protein folding in endoplasmic reticulum" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

UNIPROTKB|E7EP04 DNAJC10 "DnaJ homolog subfamily C member 10" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 5.4e-13, P = 5.4e-13
 Identities = 31/67 (46%), Positives = 43/67 (64%)

Query:    37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDM 96
             G D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D 
Sbjct:    31 GTDQDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE 90

Query:    97 DRRRNYD 103
             D R+ YD
Sbjct:    91 DLRKKYD 97

GO:0045454 "cell redox homeostasis" evidence=IEA

ZFIN|ZDB-GENE-070327-1 dnajc10 "DnaJ (Hsp40) homolog, subfamily C, member 10" [Danio rerio (taxid:7955)]

 Score = 180 (68.4 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query:    13 TFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDK 72
             T + KS  F F    L  +   SS +D+  Y++L + R  S ++IR AF +L+   HPDK
Sbjct:     9 TPSRKSLLFAFIAVWLFVS--ISSDEDY--YKLLGISREASTRDIRQAFKKLALTMHPDK 64

Query:    73 NPSNPALHDKFVKLNEAYSILNDMDRRRNYD 103
             NP++   HDKF+K+N AY +L D D R+ YD
Sbjct:    65 NPNDETAHDKFLKINRAYEVLKDEDLRKKYD 95

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0006662 "glycerol ether metabolic process" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	244
pfam00226	63	pfam00226, DnaJ, DnaJ domain	7e-25
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	9e-21
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	9e-20
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	4e-19
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	9e-19
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	7e-18
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	5e-17
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	3e-15
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-14
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-14
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	2e-14
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	6e-14
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	9e-14
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-13
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-13
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	3e-13
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	9e-13
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	1e-12
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-12
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	3e-12
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	5e-12
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	5e-12
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	5e-12
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	5e-12
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	9e-12
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	9e-12
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-11
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	2e-11
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	6e-11
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	6e-10
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	2e-09
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-09
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	3e-09
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	2e-08
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	7e-08
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	8e-08
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	2e-07
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-06

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 93.0 bits (232), Expect = 7e-25
 Identities = 29/63 (46%), Positives = 47/63 (74%)

Query: 41  THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100
            +YEIL + R+ S +EI+ A+ +L+ ++HPDKNP +PA  +KF ++NEAY +L+D ++R 
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 101 NYD 103
            YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 89.2 bits (222), Expect = 9e-21
 Identities = 26/61 (42%), Positives = 45/61 (73%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YEIL + ++ S +EI+ A+ +L+K++HPD+NP +    +KF ++NEAY +L+D ++R  Y
Sbjct: 7   YEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAY 66

Query: 103 D 103
           D
Sbjct: 67  D 67

Length = 371

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 79.5 bits (197), Expect = 9e-20
 Identities = 23/55 (41%), Positives = 40/55 (72%)

Query: 41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND 95
           +Y+IL +  + S +EI+ A+ +L+ ++HPDKNP +P   +KF ++NEAY +L+D
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 84.8 bits (211), Expect = 4e-19
 Identities = 25/61 (40%), Positives = 41/61 (67%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YE+L + RN S  EI+ A+ +L+ ++HPD+NP +    +KF ++ EAY +L+D  +R  Y
Sbjct: 7   YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAY 66

Query: 103 D 103
           D
Sbjct: 67  D 67

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 83.4 bits (207), Expect = 9e-19
 Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YEIL + ++ S +EI+ A+ +L+K++HPD+N  +    +KF ++NEAY +L+D ++R  Y
Sbjct: 3   YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQY 61

Query: 103 D 103
           D
Sbjct: 62  D 62

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 74.6 bits (184), Expect = 7e-18
 Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL-HDKFVKLNEAYSILNDMDR 98
           +YEIL + R+ S  EI+ A+ +L+ ++HPDKNP +     +KF ++NEAY +L+D ++
Sbjct: 2  DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 78.7 bits (194), Expect = 5e-17
 Identities = 29/62 (46%), Positives = 44/62 (70%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL ++RN + +EI+ A+ RL+K++HPD NP +     KF ++NEAY IL+D  +R  
Sbjct: 7   YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQ 66

Query: 102 YD 103
           YD
Sbjct: 67  YD 68

Length = 386

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 73.7 bits (181), Expect = 3e-15
 Identities = 26/62 (41%), Positives = 43/62 (69%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + R+    EI+ A+ +L+ ++HPDKNP N    + F ++NEAY +L++ D+RR 
Sbjct: 5   YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRR 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 397

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 27/62 (43%), Positives = 41/62 (66%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + R+ S  EI+ A+ +L+ Q+HPD+NP NP    KF +  EAY +L D ++R  
Sbjct: 6   YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRAR 65

Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Length = 373

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + RN + +EI+ A+ RL++++HPD N  NP   +KF ++NEAY +L+D ++R+ 
Sbjct: 5   YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKL 63

Query: 102 YD 103
           YD
Sbjct: 64  YD 65

Length = 382

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 27/62 (43%), Positives = 42/62 (67%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L LE+  S  EI+ AF +L+ ++HPDKN  N    +KF ++NEAY +L+D  ++  
Sbjct: 6   YYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQ 65

Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Length = 380

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 69.6 bits (170), Expect = 6e-14
 Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y IL + +N S  EI+ AF +L++++HPD N S P   +KF ++NEAY++L+D ++RR 
Sbjct: 6   YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-PGAEEKFKEINEAYTVLSDPEKRRI 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 291

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 69.5 bits (170), Expect = 9e-14
 Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + R  S  EI+SA+ +L+ ++HPD+N       +KF ++NEAY++L+D ++R +
Sbjct: 4   YYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 102 YD 103
           YD
Sbjct: 63  YD 64

Length = 371

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 69.1 bits (169), Expect = 1e-13
 Identities = 24/62 (38%), Positives = 43/62 (69%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y IL + +  SP+EI+ A+ +L+ ++HPDKNP +     +F +++EAY +L+D  +R +
Sbjct: 3   YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRES 62

Query: 102 YD 103
           YD
Sbjct: 63  YD 64

Length = 391

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 68.3 bits (167), Expect = 2e-13
 Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 17/92 (18%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y++L + ++ +  EI+ A+ +L++++HPD N  +    ++F +++EAY +L+D  +R+ 
Sbjct: 11  YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKE 70

Query: 102 YDASLNLQTVRQNMFVHKTRARSSYSDSGERP 133
           YD                  ARS + + G RP
Sbjct: 71  YD-----------------EARSLFGNGGFRP 85

Length = 389

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 67.7 bits (165), Expect = 3e-13
 Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + +  S +EIR A+ +L+KQ+HPD N S P  HDK V++NEA  +L D D+R+ 
Sbjct: 6   YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-PDAHDKMVEINEAADVLLDKDKRKQ 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 372

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 66.4 bits (162), Expect = 9e-13
 Identities = 24/62 (38%), Positives = 40/62 (64%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + +  +  EI+ A+ + + Q+HPDKNP +    +KF +  EAY +L+D D+R  
Sbjct: 7   YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSR 66

Query: 102 YD 103
           YD
Sbjct: 67  YD 68

Length = 386

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 22/65 (33%), Positives = 43/65 (66%)

Query: 39  DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDR 98
           +   Y+ L +  + S +EI+ A+ +L+++ HPD NP +PA  ++F  ++EA+ +L+D  +
Sbjct: 8   EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67

Query: 99  RRNYD 103
           R+ YD
Sbjct: 68  RKEYD 72

Length = 392

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 64.1 bits (155), Expect = 2e-12
 Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALH-DKFVKLNEAYSILNDMDRRR 100
           +YEIL +  N S +EI+ A+ +L+ ++HPD+NP +P +  +KF ++NEAY IL+D +RR 
Sbjct: 8   YYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRA 67

Query: 101 NYD 103
            YD
Sbjct: 68  EYD 70

Length = 237

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 23/62 (37%), Positives = 41/62 (66%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + R+ S +EI+ ++ +L+ ++HPD+NP +    + F +  EAY +L+D  +R  
Sbjct: 6   YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGI 65

Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Length = 366

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 64.6 bits (157), Expect = 5e-12
 Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPA-LHDKFVKLNEAYSILNDMDRRR 100
           +Y+IL ++RN S ++I+ AF  L+K++HPD +P N A   +KF +++EAY +L+D  +RR
Sbjct: 5   YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR 64

Query: 101 NYD 103
            YD
Sbjct: 65  QYD 67

Length = 365

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y +L + RN S  EI+ A+ +L+++ HPD NP      +KF +++ AY +L+D ++RR 
Sbjct: 5   YYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-EEAQEKFKEISVAYEVLSDPEKRRI 63

Query: 102 YD 103
            D
Sbjct: 64  VD 65

Length = 378

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y+ L + ++ S  EI+ A+ +LSK++HPD N   P   +K+ ++ EAY  L+D  +R  Y
Sbjct: 7   YDRLGVSKDASQDEIKKAYRKLSKKYHPDIN-KEPGAEEKYKEVQEAYETLSDPQKRAAY 65

Query: 103 D 103
           D
Sbjct: 66  D 66

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL-HDKFVKLNEAYSILNDMDRRR 100
           +YEIL + RN + +EI+ A+ RL K++HPD++P N      KF ++ EAY +L+D  +R 
Sbjct: 6   YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65

Query: 101 NYD 103
            YD
Sbjct: 66  MYD 68

Length = 369

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 63.6 bits (155), Expect = 9e-12
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L + ++ S  EI+ A+ +LSK++HPD N    A  +KF +++EAY +L+D  +R  
Sbjct: 6   YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGA-DEKFKEISEAYEVLSDDQKRAQ 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 376

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 63.3 bits (154), Expect = 9e-12
 Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL L ++ S ++I+ A+ +L+ ++HPDKN   P   +KF +++EAY++L+D ++R  
Sbjct: 7   YYEILGLSKDASVEDIKKAYRKLAMKYHPDKN-KEPDAEEKFKEISEAYAVLSDAEKRAQ 65

Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Length = 377

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YEIL + R+    E++ A+ RL++++HPD N   P   D+F ++N AY +L+D + R  Y
Sbjct: 6   YEILGVSRDADKDELKRAYRRLARKYHPDVN-KEPGAEDRFKEINRAYEVLSDPETRARY 64

Query: 103 D 103
           D
Sbjct: 65  D 65

Length = 374

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 62.7 bits (152), Expect = 2e-11
 Identities = 25/65 (38%), Positives = 44/65 (67%)

Query: 39  DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDR 98
           + ++Y+IL + ++ + +EI+SA+ +L+ ++HPDKN  N    +KF +  EAY IL D  +
Sbjct: 3   ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKK 62

Query: 99  RRNYD 103
           R+ YD
Sbjct: 63  RQAYD 67

Length = 372

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 61.0 bits (148), Expect = 6e-11
 Identities = 23/62 (37%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L ++RN   KEI+ A+ +L++++HPD +       +KF +++EAY++L+D ++R+ 
Sbjct: 7   YYEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEKRQR 65

Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Length = 378

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 58.2 bits (140), Expect = 6e-10
 Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 14/127 (11%)

Query: 41  THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100
           ++YEILE+E++ + + I+ ++ +L+ ++HPD+N  +    +KF  +NEAY +L+D  +R 
Sbjct: 4   SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRA 63

Query: 101 NYDASLNLQTVRQNMFVHKTRARSSYSDSGERPEN----WKDYYDFAAQ-MKRNESIHVP 155
            YD     +  ++ +     +A +S SD  +  E+    ++D + F A+  KR +S   P
Sbjct: 64  LYD-----RYGKKGL----NQAGASQSDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAP 114

Query: 156 KFLHKFE 162
            +L   E
Sbjct: 115 DYLQTIE 121

Length = 369

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 4/61 (6%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YE+L L ++C+  EI+ A+ +L+ + HPDK   +P   +KF +++ AY +L+D ++R+ Y
Sbjct: 31  YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDP---EKFKEISRAYEVLSDPEKRKIY 86

Query: 103 D 103
           D
Sbjct: 87  D 87

Length = 421

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L ++RN S  E++ A+ +L++++HPD N + P   DKF ++ EAY  L+D  ++ +
Sbjct: 6   YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAH 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 371

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 56.7 bits (136), Expect = 3e-09
 Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YE+L ++R+   +EI+ AF +L+K++HPD+N   P     F ++NEA  +L++  +R N
Sbjct: 4   YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN-KAPDAASIFAEINEANDVLSNPKKRAN 62

Query: 102 YD 103
           YD
Sbjct: 63  YD 64

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL L +  S  EI+ A+ +++ ++HPDKN  N      F +  EAY +L D ++R  
Sbjct: 5   YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQ 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

Length = 365

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 13/107 (12%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y I+ ++     K I++A+ RL++++HPD +   P    +F ++ EA+ +L+D  RR  
Sbjct: 6   YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVS-KEPDAEARFKEVAEAWEVLSDEQRRAE 64

Query: 102 YDASLNLQTVRQNMFVHKTRARSS--YSDSGERPENWKDYYDFAAQM 146
           YD           ++ H+   + +  +     +  N +D+ D  + +
Sbjct: 65  YD----------QLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSI 101

Length = 306

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 51.9 bits (124), Expect = 8e-08
 Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+IL + +  S  +++ A+++L+KQ+HPD   +  A   KF ++N AY +L D  +R  
Sbjct: 5   YYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDA-EKKFKEINAAYDVLKDEQKRAA 63

Query: 102 YD 103
           YD
Sbjct: 64  YD 65

Length = 372

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 50.9 bits (121), Expect = 2e-07
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 39  DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDR 98
           D   Y+IL +  N   KEI   + +L++ ++P K   N   H KF K+NEAY IL D+D+
Sbjct: 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFH-KFKKINEAYQILGDIDK 630

Query: 99  RRNYDASLNLQTVRQNMFVHKT 120
           ++ Y+       ++   F+H +
Sbjct: 631 KKMYN-KFGYDGIKGVNFIHPS 651

Length = 1136

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDK-----NPSNPALHDKFVKLNEAYSILNDMD 97
           YEIL ++++ S ++I+  +  LS +FHPDK     N       +K+  + +AY +L D  
Sbjct: 101 YEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160

Query: 98  RRRNY 102
           RR NY
Sbjct: 161 RRENY 165

Length = 610

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.91
KOG0713|consensus	336		99.89
KOG0717|consensus	508		99.88
PRK14288	369	chaperone protein DnaJ; Provisional	99.83
KOG0712|consensus	337		99.81
PRK14286	372	chaperone protein DnaJ; Provisional	99.8
PRK14296	372	chaperone protein DnaJ; Provisional	99.8
PRK14279	392	chaperone protein DnaJ; Provisional	99.8
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.79
KOG0716|consensus	279		99.77
PRK14285	365	chaperone protein DnaJ; Provisional	99.77
PRK14282	369	chaperone protein DnaJ; Provisional	99.77
KOG0691|consensus	296		99.77
PRK14277	386	chaperone protein DnaJ; Provisional	99.77
PRK14287	371	chaperone protein DnaJ; Provisional	99.76
PRK14295	389	chaperone protein DnaJ; Provisional	99.76
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.76
PRK14294	366	chaperone protein DnaJ; Provisional	99.76
PRK14299	291	chaperone protein DnaJ; Provisional	99.76
PRK14276	380	chaperone protein DnaJ; Provisional	99.76
PRK14283	378	chaperone protein DnaJ; Provisional	99.76
PRK14298	377	chaperone protein DnaJ; Provisional	99.76
PRK14301	373	chaperone protein DnaJ; Provisional	99.76
PRK14284	391	chaperone protein DnaJ; Provisional	99.75
PRK14297	380	chaperone protein DnaJ; Provisional	99.75
PRK14291	382	chaperone protein DnaJ; Provisional	99.75
PRK14278	378	chaperone protein DnaJ; Provisional	99.75
PRK10767	371	chaperone protein DnaJ; Provisional	99.75
PRK14280	376	chaperone protein DnaJ; Provisional	99.75
PRK14281	397	chaperone protein DnaJ; Provisional	99.74
KOG0715|consensus	288		99.74
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.72
PRK14289	386	chaperone protein DnaJ; Provisional	99.72
PRK14290	365	chaperone protein DnaJ; Provisional	99.72
KOG0721|consensus	230		99.71
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.7
PRK14300	372	chaperone protein DnaJ; Provisional	99.7
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.7
PRK14293	374	chaperone protein DnaJ; Provisional	99.7
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.7
PRK14292	371	chaperone protein DnaJ; Provisional	99.7
KOG0719|consensus	264		99.7
KOG0718|consensus	546		99.68
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.68
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.62
KOG0722|consensus	329		99.61
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.58
PRK05014	171	hscB co-chaperone HscB; Provisional	99.55
PHA03102	153	Small T antigen; Reviewed	99.55
PRK03578	176	hscB co-chaperone HscB; Provisional	99.52
PRK00294	173	hscB co-chaperone HscB; Provisional	99.52
PRK01356	166	hscB co-chaperone HscB; Provisional	99.52
KOG0624|consensus	504		99.49
KOG0720|consensus	490		99.43
KOG0550|consensus	486		99.36
KOG0714|consensus	306		99.28
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.28
PTZ00100	116	DnaJ chaperone protein; Provisional	99.27
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.27
PHA02624	647	large T antigen; Provisional	99.23
KOG1150|consensus	250		99.22
PRK01773	173	hscB co-chaperone HscB; Provisional	99.17
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.06
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	99.03
KOG0568|consensus	342		98.49
KOG1789|consensus	2235		98.2
KOG3192|consensus	168		97.72
KOG0723|consensus	112		97.69
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.48
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.34
KOG0431|consensus	453		95.67
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	92.81
TIGR02209	85	ftsL_broad cell division protein FtsL. This model	86.14
PF12732	74	YtxH: YtxH-like protein; InterPro: IPR024623 This	85.2
PF13446	62	RPT: A repeated domain in UCH-protein	84.67
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	81.53
PF04999	97	FtsL: Cell division protein FtsL; InterPro: IPR007	80.02

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=6.2e-25  Score=198.48  Aligned_cols=74  Identities=35%  Similarity=0.662  Sum_probs=70.3

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccccc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTV  111 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~  111 (244)
                      ...|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+|||||++|+.||++++....
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~   75 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK   75 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence            36799999999999999999999999999999999998999999999999999999999999999999988544

>KOG0713|consensus

Probab=99.89  E-value=1.2e-23  Score=185.97  Aligned_cols=72  Identities=36%  Similarity=0.713  Sum_probs=69.1

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ...+|||+||||+++|+..|||+|||+||++||||+|+++|.|.+.|+.|+.||+|||||.+|+.||.+|..
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEe   84 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEE   84 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHh
Confidence            346899999999999999999999999999999999999999999999999999999999999999999955

>KOG0717|consensus

Probab=99.88  E-value=8.7e-22  Score=179.45  Aligned_cols=185  Identities=19%  Similarity=0.233  Sum_probs=115.1

Q ss_pred             CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhccccccccc
Q psy5201          35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQ  113 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~~  113 (244)
                      .+....+||+||||.++|+..+||++||+||++||||+||+. .++.++|++|+.||+|||||..|++||.+........
T Consensus         3 ~~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~   82 (508)
T KOG0717|consen    3 NPFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK   82 (508)
T ss_pred             CchhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence            345678999999999999999999999999999999998865 7899999999999999999999999998886422222


Q ss_pred             CccccCCCC--CCCC--CCCCCCCCchHHHHHHHH----hcccccc-------cccccccccccccchhHHHHHHHHHHH
Q psy5201         114 NMFVHKTRA--RSSY--SDSGERPENWKDYYDFAA----QMKRNES-------IHVPKFLHKFETLSKATLVMLLIGVAT  178 (244)
Q Consensus       114 ~~~~~~~~~--~~~~--~~~~~~~~~we~~~~~~~----~~~~~~~-------~~~p~~~~~~~~~s~~~~v~~~~~~~~  178 (244)
                      ...++-+..  -.++  ....+|..+-..||+++.    ....++.       .-.|.+  +.....++.++ .+..+|.
T Consensus        83 ~s~~~~~~~dlf~ff~~~~y~gy~~~~~gfy~vy~dvf~~~~~~e~~~~~d~~~~ap~f--g~~~t~ye~~~-~fY~~W~  159 (508)
T KOG0717|consen   83 NSDTGVQIEDLFQFFTSSCYIGYENTSAGFYRVYQDVFNALASDELPFLGDSKLLYPLF--GYSTTDYEQVV-PFYQFWL  159 (508)
T ss_pred             CCccccchHHHHHHhhhhhhcccccccchhHHHHHHHHHHHhhhhhhhccCCccccccc--cCCCCcHHHHH-HHHHHHH
Confidence            221111111  0000  012222222223333333    2222221       123333  55677788877 6666666


Q ss_pred             HHHHHHHHHHhhhchhchhhhchhhHHHHHHHHHHHHHHhhhhhHHHH
Q psy5201         179 GALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKKYDLQENI  226 (244)
Q Consensus       179 ~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~r~~ar~~~~~~q~  226 (244)
                      .....-.+.    .......++..++...+++++.-..+|..+.+++-
T Consensus       160 afsT~Ksf~----W~d~Ydv~~~~~r~~~R~v~~enkk~rq~ak~eyN  203 (508)
T KOG0717|consen  160 AFSTKKSFE----WLDEYDVEEESDRFTRRLMERENKKQRQYARQEYN  203 (508)
T ss_pred             hhhhhhhHH----hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            544333332    22223345566666666666666666655555543

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=9.9e-21  Score=173.75  Aligned_cols=70  Identities=33%  Similarity=0.632  Sum_probs=66.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+||++||||++++++.++++|++|++||+||+||.+|+.||.++..
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~   71 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK   71 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence            3699999999999999999999999999999999987788999999999999999999999999998754

>KOG0712|consensus

Probab=99.81  E-value=4.1e-20  Score=165.20  Aligned_cols=70  Identities=33%  Similarity=0.632  Sum_probs=65.6

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccccc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQT  110 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~  110 (244)
                      ....+|+||||+++||.+|||+|||+|+++||||+|++   +.++|++|++||+|||||++|+.||.++....
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~   71 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL   71 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence            35789999999999999999999999999999999994   78999999999999999999999999997644

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=1e-19  Score=167.19  Aligned_cols=70  Identities=36%  Similarity=0.640  Sum_probs=66.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +.|||+||||+++|+.+|||+|||+|+++||||++++++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   72 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKA   72 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCch
Confidence            4699999999999999999999999999999999987788999999999999999999999999998764

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=5e-20  Score=169.20  Aligned_cols=69  Identities=42%  Similarity=0.712  Sum_probs=65.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ ++.+.++|++|++||+|||||.+|+.||.++..
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~   71 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA   71 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence            469999999999999999999999999999999997 678999999999999999999999999998754

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=5.6e-20  Score=169.99  Aligned_cols=69  Identities=32%  Similarity=0.687  Sum_probs=66.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++++.+.++|++|++||+|||||++|+.||.++.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            479999999999999999999999999999999998778899999999999999999999999999874

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.79  E-value=2.3e-19  Score=124.52  Aligned_cols=63  Identities=52%  Similarity=0.886  Sum_probs=59.8

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHH
Q psy5201          41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP-ALHDKFVKLNEAYSILNDMDRRRNYD  103 (244)
Q Consensus        41 ~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~-~~~~~f~~i~~Ay~vL~dp~~R~~YD  103 (244)
                      |||+||||+++++.++||++|+++++.+|||+++... .+.+.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999988554 68899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0716|consensus

Probab=99.77  E-value=3.1e-19  Score=153.58  Aligned_cols=70  Identities=39%  Similarity=0.682  Sum_probs=67.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..+.|+|||++++|+.++||++||+|+++||||+++++|++.+.|++||+||+||+||.+|..||.++..
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~   99 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGEL   99 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhH
Confidence            5689999999999999999999999999999999998899999999999999999999999999999755

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=4.7e-19  Score=162.45  Aligned_cols=69  Identities=35%  Similarity=0.578  Sum_probs=66.1

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++||.+|||+|||+|+++||||++++++.+.++|++|++||+||+||.+|..||.++..
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~   71 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT   71 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence            699999999999999999999999999999999987788999999999999999999999999998764

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5.8e-19  Score=162.14  Aligned_cols=70  Identities=39%  Similarity=0.686  Sum_probs=65.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+|+++||||+++.+ +.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~   73 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYV   73 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcc
Confidence            46999999999999999999999999999999999854 67889999999999999999999999998754

>KOG0691|consensus

Probab=99.77  E-value=5.6e-19  Score=156.24  Aligned_cols=70  Identities=36%  Similarity=0.686  Sum_probs=68.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+.+|+..+|++||+..+++||||+||++|.|.++|+.+.+||+||+|+..|..||..+..
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~   73 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKS   73 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh
Confidence            6899999999999999999999999999999999999999999999999999999999999999999977

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=6.8e-19  Score=162.53  Aligned_cols=70  Identities=41%  Similarity=0.729  Sum_probs=66.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+|+++||||++++++.++++|++|++||+||+||.+|+.||.++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   73 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHA   73 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence            4699999999999999999999999999999999987788999999999999999999999999998754

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=8.2e-19  Score=161.19  Aligned_cols=69  Identities=35%  Similarity=0.669  Sum_probs=65.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+|+++||||+|+ +++++++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~   71 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHT   71 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCc
Confidence            469999999999999999999999999999999997 578899999999999999999999999998864

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.1e-18  Score=161.27  Aligned_cols=66  Identities=29%  Similarity=0.727  Sum_probs=63.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHh
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDA  104 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~  104 (244)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++++.++++|++|++||+||+||.+|+.||.
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~   73 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE   73 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence            469999999999999999999999999999999998777899999999999999999999999998

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.76  E-value=8.2e-19  Score=163.18  Aligned_cols=71  Identities=31%  Similarity=0.627  Sum_probs=64.2

Q ss_pred             CCCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          34 YSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        34 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +......|||+||||+++||.+|||+|||+||++||||+++ +   .++|++|++||+||+||.+|+.||.++..
T Consensus        22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~-~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~   92 (421)
T PTZ00037         22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGG-D---PEKFKEISRAYEVLSDPEKRKIYDEYGEE   92 (421)
T ss_pred             cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCc-h---HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence            34445789999999999999999999999999999999986 3   48999999999999999999999998754

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.2e-18  Score=159.97  Aligned_cols=70  Identities=33%  Similarity=0.613  Sum_probs=66.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++++.+.++|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~   72 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHE   72 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccc
Confidence            4799999999999999999999999999999999987788999999999999999999999999998854

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.1e-18  Score=155.51  Aligned_cols=69  Identities=39%  Similarity=0.709  Sum_probs=65.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~   71 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT   71 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence            369999999999999999999999999999999997 678999999999999999999999999998765

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=9.6e-19  Score=161.23  Aligned_cols=69  Identities=33%  Similarity=0.619  Sum_probs=65.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   71 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAA   71 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCc
Confidence            469999999999999999999999999999999998 678899999999999999999999999998864

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.1e-18  Score=160.73  Aligned_cols=69  Identities=33%  Similarity=0.679  Sum_probs=65.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+||++|+++||||+|+ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~   72 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA   72 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence            579999999999999999999999999999999998 578999999999999999999999999998754

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=9.5e-19  Score=161.05  Aligned_cols=69  Identities=36%  Similarity=0.704  Sum_probs=65.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+||++|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   72 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA   72 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence            469999999999999999999999999999999997 678899999999999999999999999998854

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1e-18  Score=160.62  Aligned_cols=70  Identities=39%  Similarity=0.715  Sum_probs=66.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.++||+|||+|+++||||++++++.++++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~   72 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHA   72 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccc
Confidence            4699999999999999999999999999999999987788999999999999999999999999998764

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.4e-18  Score=160.79  Aligned_cols=69  Identities=35%  Similarity=0.685  Sum_probs=65.8

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++||.+|||+|||+|+++||||++++++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   69 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD   69 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence            389999999999999999999999999999999997788999999999999999999999999998864

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.1e-18  Score=160.97  Aligned_cols=70  Identities=39%  Similarity=0.672  Sum_probs=66.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++++.++++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~   72 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA   72 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcc
Confidence            3699999999999999999999999999999999987788999999999999999999999999998754

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.3e-18  Score=160.49  Aligned_cols=69  Identities=41%  Similarity=0.737  Sum_probs=65.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.++||+|||+|+++||||+|+ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~   70 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA   70 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence            469999999999999999999999999999999998 578899999999999999999999999998864

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.3e-18  Score=160.21  Aligned_cols=68  Identities=34%  Similarity=0.627  Sum_probs=64.8

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~   70 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP   70 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence            69999999999999999999999999999999998 778999999999999999999999999998754

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=2.2e-18  Score=158.46  Aligned_cols=70  Identities=36%  Similarity=0.693  Sum_probs=66.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.+|||+||++|+++||||++++++.+.++|++|++||+||+||.+|..||.++..
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHA   72 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccc
Confidence            4699999999999999999999999999999999987788999999999999999999999999998754

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=2.1e-18  Score=158.73  Aligned_cols=69  Identities=35%  Similarity=0.637  Sum_probs=65.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+||++|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   71 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHA   71 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCcc
Confidence            369999999999999999999999999999999998 677899999999999999999999999998754

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=2.1e-18  Score=159.83  Aligned_cols=69  Identities=38%  Similarity=0.710  Sum_probs=65.8

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.+|||+|||+|+++||||++++++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~   71 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA   71 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence            699999999999999999999999999999999987788899999999999999999999999998764

>KOG0715|consensus

Probab=99.74  E-value=2.8e-18  Score=152.40  Aligned_cols=68  Identities=40%  Similarity=0.665  Sum_probs=65.6

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        41 ~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      |||+||||+++|+..|||+||++|+|+||||.+. ++++.++|++|.+||+||+|+++|..||..+...
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~-~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~  111 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNK-DKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ  111 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999999998 6699999999999999999999999999999874

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.72  E-value=5.2e-17  Score=159.81  Aligned_cols=71  Identities=32%  Similarity=0.508  Sum_probs=66.2

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..+.+||+||||+++|+..+||+|||+||++||||++++ +.+.++|+.|++||+|||||.+|+.||.+|..
T Consensus       570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~-~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~  640 (1136)
T PTZ00341        570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSG-NEGFHKFKKINEAYQILGDIDKKKMYNKFGYD  640 (1136)
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHhCCHHHHHHHhhcccc
Confidence            346899999999999999999999999999999999985 46888999999999999999999999998765

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=9e-18  Score=155.15  Aligned_cols=70  Identities=34%  Similarity=0.630  Sum_probs=66.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++|+.+|||+||++|+++||||++++++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~   73 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA   73 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence            4799999999999999999999999999999999987788999999999999999999999999998754

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=8.9e-18  Score=154.10  Aligned_cols=69  Identities=39%  Similarity=0.750  Sum_probs=64.9

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP-ALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~-~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.+|||+|||+|+++||||++++++ .+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~   72 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV   72 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence            69999999999999999999999999999999998654 7899999999999999999999999998754

>KOG0721|consensus

Probab=99.71  E-value=3.5e-17  Score=136.88  Aligned_cols=72  Identities=38%  Similarity=0.582  Sum_probs=66.7

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ....||||||||+++++..|||+|||+|+++||||+++...+.++.|..|++||+.|+|+..|+.|..+++.
T Consensus        96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P  167 (230)
T KOG0721|consen   96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP  167 (230)
T ss_pred             hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence            556899999999999999999999999999999999985567788899999999999999999999998866

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.70  E-value=1.5e-17  Score=152.04  Aligned_cols=67  Identities=37%  Similarity=0.713  Sum_probs=63.8

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        41 ~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      |||+||||+++|+.++||+||++|+++||||+++ ++.+.++|++|++||+||+||.+|..||.++..
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~   67 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHA   67 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccc
Confidence            7999999999999999999999999999999997 677899999999999999999999999998754

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=1.5e-17  Score=152.87  Aligned_cols=68  Identities=31%  Similarity=0.608  Sum_probs=64.4

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++||.+|||+||++|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   70 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD   70 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence            69999999999999999999999999999999997 667889999999999999999999999998754

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.70  E-value=3.1e-17  Score=112.11  Aligned_cols=58  Identities=41%  Similarity=0.757  Sum_probs=54.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC-ChHHHHHHHHHHHHHHHcCChh
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPS-NPALHDKFVKLNEAYSILNDMD   97 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~-~~~~~~~f~~i~~Ay~vL~dp~   97 (244)
                      .|||+||||+++++.++||++|+++++++|||++++ .+.+.+.|..|++||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence            489999999999999999999999999999999986 5778899999999999999985

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=2.3e-17  Score=151.80  Aligned_cols=68  Identities=35%  Similarity=0.685  Sum_probs=64.4

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.+|||+||++|+++||||+++ ++.+.++|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~   70 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEA   70 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence            69999999999999999999999999999999998 577899999999999999999999999998754

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.70  E-value=2.4e-17  Score=147.93  Aligned_cols=67  Identities=30%  Similarity=0.606  Sum_probs=63.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      .|||+||||+++|+.+|||+||++|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++.
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~   70 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ   70 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence            69999999999999999999999999999999987 56899999999999999999999999999764

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=2.4e-17  Score=151.53  Aligned_cols=68  Identities=37%  Similarity=0.687  Sum_probs=64.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.++||+||++|+++||||+++ ++.+.++|+.|++||+||+||.+|+.||.++..
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~   69 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA   69 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence            48999999999999999999999999999999998 678999999999999999999999999998764

>KOG0719|consensus

Probab=99.70  E-value=3.2e-17  Score=138.29  Aligned_cols=72  Identities=38%  Similarity=0.647  Sum_probs=66.1

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCC--CChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNP--SNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~--~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ....|+|+||||.++|+.++|++|||+|++++|||+++  +..++.+.|++|+.||.||+|..+|+.||..+..
T Consensus        11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            34559999999999999999999999999999999995  2367889999999999999999999999999876

>KOG0718|consensus

Probab=99.68  E-value=5e-17  Score=148.63  Aligned_cols=74  Identities=32%  Similarity=0.567  Sum_probs=67.3

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHhcccccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQT  110 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~---~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~  110 (244)
                      ..+.++|.+|||+++||.+|||+|||++++.||||++.+.   ..|++.|+.|.+||+|||||++|..||.+|..+-
T Consensus         6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL   82 (546)
T KOG0718|consen    6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGL   82 (546)
T ss_pred             cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccc
Confidence            4466999999999999999999999999999999998843   4688999999999999999999999999997743

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.68  E-value=1.1e-16  Score=107.32  Aligned_cols=55  Identities=42%  Similarity=0.831  Sum_probs=52.0

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q psy5201          41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND   95 (244)
Q Consensus        41 ~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~d   95 (244)
                      |||+||||+++++.++||++|++|++++|||++++.+.+.+.|..|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999999998447789999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.62  E-value=9.4e-16  Score=128.70  Aligned_cols=69  Identities=42%  Similarity=0.719  Sum_probs=65.2

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChH-HHHHHHHHHHHHHHcCChhHHHHHHhcc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPA-LHDKFVKLNEAYSILNDMDRRRNYDASL  106 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~-~~~~f~~i~~Ay~vL~dp~~R~~YD~~~  106 (244)
                      ...+||+||||+++|+..|||++|++++++||||+++.++. +.+.|..|++||+||+|+..|..||..+
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            45799999999999999999999999999999999997775 9999999999999999999999999864

>KOG0722|consensus

Probab=99.61  E-value=7.2e-16  Score=131.66  Aligned_cols=76  Identities=36%  Similarity=0.705  Sum_probs=69.1

Q ss_pred             cccccccccCCCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHh
Q psy5201          25 RTGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDA  104 (244)
Q Consensus        25 ~~~l~~~~~~~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~  104 (244)
                      ..+|.|+       ..|+|+||||++.++..+|.+|||+|++++|||+++ +++..+.|+.|..||++|.|.+.|..||.
T Consensus        25 ~egLYCG-------~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r-~~e~k~~F~~iAtayeilkd~e~rt~ydy   96 (329)
T KOG0722|consen   25 SEGLYCG-------AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNR-DPESKKLFVKIATAYEILKDNETRTQYDY   96 (329)
T ss_pred             hhhhccc-------chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccC-CchhhhhhhhhhcccccccchhhHHhHHH
Confidence            3455566       679999999999999999999999999999999999 66666999999999999999999999999


Q ss_pred             cccc
Q psy5201         105 SLNL  108 (244)
Q Consensus       105 ~~~~  108 (244)
                      .+..
T Consensus        97 aldh  100 (329)
T KOG0722|consen   97 ALDH  100 (329)
T ss_pred             HhcC
Confidence            9866

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.58  E-value=3.5e-15  Score=144.17  Aligned_cols=68  Identities=35%  Similarity=0.662  Sum_probs=64.3

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.++||++||+|+++||||+++ .+.+.++|+.|++||++|+||.+|..||.++..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~-~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~a   69 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNK-APDAASIFAEINEANDVLSNPKKRANYDKYGHD   69 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCCHHHHHHHhhhccc
Confidence            59999999999999999999999999999999998 477888999999999999999999999998765

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.55  E-value=9.8e-15  Score=120.56  Aligned_cols=69  Identities=25%  Similarity=0.382  Sum_probs=61.1

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++  ++..+|+++|+++++++|||+..+.+.     +.+.|..|++||++|+||.+|..|+..+.+
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~g   76 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLHG   76 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhcC
Confidence            389999999996  688999999999999999999875432     567899999999999999999999988765

>PHA03102 Small T antigen; Reviewed

Probab=99.55  E-value=5.3e-15  Score=119.40  Aligned_cols=65  Identities=23%  Similarity=0.359  Sum_probs=60.1

Q ss_pred             cCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ...|+||||+++|  |.++||+||+++++++|||+++ +   .++|+.|++||++|+|+.+|..||..+..
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg-~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~   71 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-D---EEKMKELNTLYKKFRESVKSLRDLDGEED   71 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-h---hHHHHHHHHHHHHHhhHHHhccccccCCc
Confidence            3579999999999  9999999999999999999975 2   47999999999999999999999998866

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.52  E-value=3e-14  Score=118.11  Aligned_cols=70  Identities=23%  Similarity=0.345  Sum_probs=61.4

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChHHHH-----HHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPALHD-----KFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~-----~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++  ++..+|+++|++|++++|||+++..+....     .+..|++||++|+||.+|..|+..+.+
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G   81 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRG   81 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcC
Confidence            4799999999995  689999999999999999999875554433     458999999999999999999987765

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.52  E-value=3.1e-14  Score=117.57  Aligned_cols=71  Identities=24%  Similarity=0.465  Sum_probs=63.4

Q ss_pred             CccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          38 QDHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +..|||++|||++.  .+..+|+++|++|++++|||++.+.+.     +.+.+..|++||+||+||.+|..|+..+.+
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~g   79 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALSG   79 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcC
Confidence            46799999999997  678999999999999999999875543     567899999999999999999999998865

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.52  E-value=2.6e-14  Score=117.42  Aligned_cols=69  Identities=25%  Similarity=0.361  Sum_probs=60.2

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA---LHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||++.  ++..+|+++|+++++++|||++.+..+   +.+.+..|++||+||+||.+|..|+..+.+
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~g   75 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQN   75 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHccC
Confidence            489999999996  789999999999999999999874322   334688999999999999999999988865

>KOG0624|consensus

Probab=99.49  E-value=5e-14  Score=125.74  Aligned_cols=72  Identities=29%  Similarity=0.566  Sum_probs=65.5

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~---~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +..+|||+||||.++|+..||-+|||+++.++|||-..+.   ..++..|..|..|-+||+||++|+.||..-..
T Consensus       391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP  465 (504)
T KOG0624|consen  391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP  465 (504)
T ss_pred             hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence            4568999999999999999999999999999999988744   35888999999999999999999999987654

>KOG0720|consensus

Probab=99.43  E-value=1.5e-13  Score=125.94  Aligned_cols=70  Identities=29%  Similarity=0.522  Sum_probs=66.5

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      .+..|+|.||||+++++.++||+.|+++|...|||||. .+.|+|.|+.|..||++|+|+.+|..||..+.
T Consensus       232 ~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~  301 (490)
T KOG0720|consen  232 LNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK  301 (490)
T ss_pred             hcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence            34789999999999999999999999999999999998 89999999999999999999999999998773

>KOG0550|consensus

Probab=99.36  E-value=5.5e-13  Score=121.24  Aligned_cols=74  Identities=35%  Similarity=0.609  Sum_probs=68.3

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      .++.+|||.||||.++++..|||++|+++++.+|||++.++ .+++..|++|.+||.||+||.+|..||......
T Consensus       369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle  443 (486)
T KOG0550|consen  369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLE  443 (486)
T ss_pred             HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchh
Confidence            35678999999999999999999999999999999999987 788999999999999999999999999876553

>KOG0714|consensus

Probab=99.28  E-value=3.9e-12  Score=111.53  Aligned_cols=73  Identities=34%  Similarity=0.651  Sum_probs=64.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccccccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQTVR  112 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~  112 (244)
                      ..|+|+||||.++|+..+|++||+++++++|||+++.. ..+..+|.+|.+||++|+||.+|..||..+. ....
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~-~~~~   75 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE-EGLK   75 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc-cccc
Confidence            46999999999999999999999999999999998854 2455589999999999999999999999997 4443

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.28  E-value=1.6e-11  Score=112.55  Aligned_cols=70  Identities=33%  Similarity=0.601  Sum_probs=63.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-----hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-----PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-----~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      --||||||||+.+++..+||++||+|+.++|||+.+.-     ++-++.+.+|++||..|+|...|+.|-.+|..
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP  171 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP  171 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence            46999999999999999999999999999999998751     46788999999999999999999999888765

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.27  E-value=5.1e-12  Score=97.27  Aligned_cols=52  Identities=31%  Similarity=0.388  Sum_probs=47.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcC
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILN   94 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~   94 (244)
                      ..++|+||||++++|.+|||++|++|++++|||+.+ +   .+.|++|++||++|.
T Consensus        64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~  115 (116)
T PTZ00100         64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999853 3   467899999999995

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.27  E-value=4.9e-12  Score=111.51  Aligned_cols=58  Identities=22%  Similarity=0.434  Sum_probs=51.7

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-------hHHHHHHHHHHHHHHHcCC
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-------PALHDKFVKLNEAYSILND   95 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-------~~~~~~f~~i~~Ay~vL~d   95 (244)
                      ...++|+||||++++|.++||++||+|+++||||++.+.       +.+.++|+.|++||++|+.
T Consensus       198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            447999999999999999999999999999999996431       3578999999999999974

>PHA02624 large T antigen; Provisional

Probab=99.23  E-value=1.6e-11  Score=117.61  Aligned_cols=62  Identities=24%  Similarity=0.446  Sum_probs=57.0

Q ss_pred             CccCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy5201          38 QDHTHYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYD  103 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD  103 (244)
                      ...++|+||||+++|  +.++||+|||++++++|||+++ +   .+.|+.|++||++|+|+.+|..|.
T Consensus         9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~~   72 (647)
T PHA02624          9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQS   72 (647)
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhcc
Confidence            346899999999999  9999999999999999999974 3   579999999999999999999994

>KOG1150|consensus

Probab=99.22  E-value=3.6e-10  Score=93.78  Aligned_cols=70  Identities=23%  Similarity=0.449  Sum_probs=63.4

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDAS  105 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~  105 (244)
                      +.-+.|||+||.|.|+.+.++||+.|++|+...|||+|+++ +.|...|..|..||.+|-|+..|..-+..
T Consensus        49 tyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~~  119 (250)
T KOG1150|consen   49 TYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLDV  119 (250)
T ss_pred             cccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988 78899999999999999999977765433

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.17  E-value=7.5e-11  Score=97.50  Aligned_cols=68  Identities=24%  Similarity=0.369  Sum_probs=60.1

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          40 HTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        40 ~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      .|||++|||++.  .+..+++++|++|.+.+|||+....+.     +.+.-..||+||.+|+||.+|+.|=..+.
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~   76 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN   76 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence            489999999996  799999999999999999999875532     44567899999999999999999988776

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.06  E-value=4.2e-10  Score=91.77  Aligned_cols=57  Identities=32%  Similarity=0.416  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHhhCCCCCCCCh-----HHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          52 CSPKEIRSAFIRLSKQFHPDKNPSNP-----ALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        52 a~~~eIk~ay~~l~~~~HPD~~~~~~-----~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .+..+|+++|+++++++|||+.+..+     .+.+.+..|++||++|+||.+|..|+..+.+
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~g   64 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLHG   64 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcC
Confidence            57889999999999999999965432     2667899999999999999999999999875

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=99.03  E-value=4.4e-09  Score=91.15  Aligned_cols=74  Identities=24%  Similarity=0.357  Sum_probs=64.0

Q ss_pred             CCCCccCcccccccCC---CCCHHHHHHHHHHHHHhhCCCCCC--CChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          35 SSGQDHTHYEILELER---NCSPKEIRSAFIRLSKQFHPDKNP--SNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~---~a~~~eIk~ay~~l~~~~HPD~~~--~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ...+..|+|.+|||+.   .+++.+|.++.++.+.+||||+..  ++-+..+-|..|..||+||+|+..|..||.--..
T Consensus        38 k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~  116 (379)
T COG5269          38 KNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFD  116 (379)
T ss_pred             hhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccc
Confidence            3456789999999985   688999999999999999999973  3456788999999999999999999999976544

>KOG0568|consensus

Probab=98.49  E-value=1.4e-07  Score=80.24  Aligned_cols=56  Identities=32%  Similarity=0.604  Sum_probs=50.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHH-HcCC
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYS-ILND   95 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~-vL~d   95 (244)
                      -..||.||||..+|+.++++.+|+.|++++|||... +....++|.+|.+||. ||+.
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs-~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGS-EEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCC-ccccHHHHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999887 5566789999999997 8864

>KOG1789|consensus

Probab=98.20  E-value=1.8e-06  Score=86.53  Aligned_cols=54  Identities=33%  Similarity=0.639  Sum_probs=46.6

Q ss_pred             CccCcccccccCCC----CCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcC
Q psy5201          38 QDHTHYEILELERN----CSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILN   94 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~----a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~   94 (244)
                      ..-+-|+||+|+-+    -..+.||++|++|+.+||||+||   +..+.|..|++||+.|+
T Consensus      1279 S~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1279 SVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred             chHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence            34578999999853    34588999999999999999997   66799999999999998

>KOG3192|consensus

Probab=97.72  E-value=4.8e-05  Score=61.15  Aligned_cols=72  Identities=25%  Similarity=0.465  Sum_probs=58.7

Q ss_pred             CCccCcccccccCC--CCCHHHHHHHHHHHHHhhCCCCCCCC-----hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELER--NCSPKEIRSAFIRLSKQFHPDKNPSN-----PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~--~a~~~eIk~ay~~l~~~~HPD~~~~~-----~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +...+||.|+|...  ..+++.++.-|.-.++++|||+....     ..+.+....|++||++|.||-+|+.|=..+.+
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g   83 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKG   83 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence            45679999998754  45677777799999999999994421     34778899999999999999999999777655

>KOG0723|consensus

Probab=97.69  E-value=6.9e-05  Score=56.46  Aligned_cols=51  Identities=29%  Similarity=0.386  Sum_probs=43.2

Q ss_pred             cccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCCh
Q psy5201          42 HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDM   96 (244)
Q Consensus        42 ~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp   96 (244)
                      -=.||||++.++.+.||.++|+.....|||+.. +|--   -..|++|+++|...
T Consensus        58 A~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SPYl---AsKINEAKdlLe~~  108 (112)
T KOG0723|consen   58 AALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SPYL---ASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CHHH---HHHHHHHHHHHhcc
Confidence            335999999999999999999999999999987 5522   25799999999754

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.48  E-value=0.0023  Score=52.93  Aligned_cols=67  Identities=21%  Similarity=0.360  Sum_probs=53.4

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          41 THYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        41 ~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      ++...+|.++.+  ..+.++..|+.+.+.+|||+....+.     +.+++..++.||.+|.||-.|..|=..+.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~   75 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA   75 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence            345556666544  56778999999999999999875432     44689999999999999999999977665

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.34  E-value=0.0024  Score=52.89  Aligned_cols=55  Identities=25%  Similarity=0.479  Sum_probs=47.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-------hHHHHHHHHHHHHHHHc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-------PALHDKFVKLNEAYSIL   93 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-------~~~~~~f~~i~~Ay~vL   93 (244)
                      ..+.|.+||+...++..+|+++|+++....|||+-.+.       ..+.+.++.|++||+.+
T Consensus       112 ~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         112 REDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             chhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            37999999999999999999999999999999985422       35778899999999753

>KOG0431|consensus

Probab=95.67  E-value=0.014  Score=55.30  Aligned_cols=47  Identities=23%  Similarity=0.375  Sum_probs=35.7

Q ss_pred             ccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-------HHHHHHHHHHHHHHHc
Q psy5201          47 ELERNCSPKEIRSAFIRLSKQFHPDKNPSNP-------ALHDKFVKLNEAYSIL   93 (244)
Q Consensus        47 gv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~-------~~~~~f~~i~~Ay~vL   93 (244)
                      ++..-.+.++||++||+.++..||||.+..+       .+++.|-.+.+|++.-
T Consensus       395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f  448 (453)
T KOG0431|consen  395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF  448 (453)
T ss_pred             chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence            4445678999999999999999999987552       2456677777776643

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=92.81  E-value=0.24  Score=38.93  Aligned_cols=50  Identities=24%  Similarity=0.208  Sum_probs=33.8

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcC
Q psy5201          41 THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILN   94 (244)
Q Consensus        41 ~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~   94 (244)
                      --.+||||++..+.++|.+.|.+|-...+|++.+ +.   =.=..|..|.+.|.
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGG-Sf---YLQSKV~rAKErl~  108 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGG-SF---YLQSKVFRAKERLE  108 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCC-CH---HHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999875 32   11244666766665

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>TIGR02209 ftsL_broad cell division protein FtsL

Probab=86.14  E-value=9.7  Score=27.05  Aligned_cols=18  Identities=22%  Similarity=0.408  Sum_probs=11.3

Q ss_pred             HHHHHHHHhhCCCCCCCC
Q psy5201         227 DRFAKRYQESYPYRRPDS  244 (244)
Q Consensus       227 e~~~~~~~~~~~~~~~~~  244 (244)
                      +++++.-.+.+.+.+|+.
T Consensus        61 ~rIe~~Ar~~lgM~~p~~   78 (85)
T TIGR02209        61 ERIEKIAKKQLGMKLPDA   78 (85)
T ss_pred             HHHHHHHHHhcCCCCCCC
Confidence            445555556678887763

This model represents FtsL, both forms similar to that in E. coli and similar to that in B. subtilis. FtsL is one of the later proteins active in cell division septum formation. FtsL is small, low in complexity, and highly divergent. The scope of this model is broader than that of the Pfam model pfam04999.3 for FtsL, as this one includes FtsL from Bacillus subtilis and related species.

>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria

Probab=85.20  E-value=7.2  Score=27.27  Aligned_cols=50  Identities=12%  Similarity=0.169  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhchhchhhhchhhHHHHHHHHHHHHHHhh
Q psy5201         170 VMLLIGVATGALGLQILAVQYSKTFPRNVVNSREMEISQNLMNARNDAKK  219 (244)
Q Consensus       170 v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~r~~ar~  219 (244)
                      +..+++-+++|+.+.++.-..+....++.+...-........+..+.++.
T Consensus         2 ~~g~l~Ga~~Ga~~glL~aP~sG~e~R~~l~~~~~~~~~~~~~~~~~~~~   51 (74)
T PF12732_consen    2 LLGFLAGAAAGAAAGLLFAPKSGKETREKLKDKAEDLKDKAKDLYEEAKE   51 (74)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566666677777777777777777777777666666666666655444

Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=84.67  E-value=2.3  Score=28.73  Aligned_cols=27  Identities=30%  Similarity=0.383  Sum_probs=24.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHH
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSK   66 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~   66 (244)
                      .+-|++|||+++.+.+.|-.+|.....
T Consensus         5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    5 EEAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999887

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=81.53  E-value=3.8  Score=31.46  Aligned_cols=47  Identities=28%  Similarity=0.329  Sum_probs=36.2

Q ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCChH----HHHHHHHHHHHHHHcCCh
Q psy5201          50 RNCSPKEIRSAFIRLSKQFHPDKNPSNPA----LHDKFVKLNEAYSILNDM   96 (244)
Q Consensus        50 ~~a~~~eIk~ay~~l~~~~HPD~~~~~~~----~~~~f~~i~~Ay~vL~dp   96 (244)
                      +..+..+++.+.+.+-+..|||.....|.    .++-++.++.-.+.|..+
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~   54 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR   54 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence            45677899999999999999998776653    345677777777777654

>PF04999 FtsL: Cell division protein FtsL; InterPro: IPR007082 In Escherichia coli, nine gene products are known to be essential for assembly of the division septum

Probab=80.02  E-value=21  Score=26.12  Aligned_cols=19  Identities=16%  Similarity=0.228  Sum_probs=11.8

Q ss_pred             HHHHHHHHHhhCCCCCCCC
Q psy5201         226 IDRFAKRYQESYPYRRPDS  244 (244)
Q Consensus       226 ~e~~~~~~~~~~~~~~~~~  244 (244)
                      .+++++.-.+.+.+.+|++
T Consensus        71 ~~rIe~iA~~~LgM~~P~~   89 (97)
T PF04999_consen   71 PSRIERIAREKLGMVPPEP   89 (97)
T ss_pred             HHHHHHHHHHcCCCCCCCC
Confidence            3444555555788888874

One of these, FtsL, is a bitopic membrane protein whose precise function is not understood. It has been proposed that FtsL interacts with the DivIC protein IPR007060 from INTERPRO [], however this interaction may be indirect [].; GO: 0007049 cell cycle, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	244
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		8e-13
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		3e-12
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		5e-12
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-11
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		2e-09
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		3e-09
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-09
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		6e-09
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		1e-08
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		2e-08
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		2e-08
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		1e-07
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		1e-07
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		6e-07
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		3e-06
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		9e-06
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		1e-05
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		2e-05
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		6e-04
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		9e-04

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 16/106 (15%)
Query: 39  DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDR 98
           D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D D 
Sbjct: 20  DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 79
Query: 99  RRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDY-YDFA 143
           R+ YD               K   +    + G + E+W  Y YDF 
Sbjct: 80  RKKYD---------------KYGEKGLEDNQGGQYESWSYYRYDFG 110

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D D R+ Y
Sbjct: 5   YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 64
Query: 103 D 103
           D
Sbjct: 65  D 65

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 35  SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILN 94
           SSG    +Y+IL + RN S KEI+ A+ +L+K++HPD N  +P   +KF +L EAY +L+
Sbjct: 2   SSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLS 61
Query: 95  DMDRRRNYDA 104
           D  +R+ YDA
Sbjct: 62  DEVKRKQYDA 71

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 32  QRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYS 91
           QR  S    + Y +L L++N +  +I+ ++ +L+ ++HPDKNP NP   DKF ++N A++
Sbjct: 9   QRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHA 68
Query: 92  ILNDMDRRRNYD--ASLNLQTVRQ 113
           IL D  +R  YD   SL L    Q
Sbjct: 69  ILTDATKRNIYDKYGSLGLYVAEQ 92

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 39  DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDR 98
           D   Y +L + R  S  +I+ A+ +L++++HPDKN  +P   D+F+++++AY IL++ ++
Sbjct: 16  DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKN-KDPGAEDRFIQISKAYEILSNEEK 74
Query: 99  RRNYD 103
           R NYD
Sbjct: 75  RTNYD 79

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + +    +EIR A+ RL+ ++HPD+N  +     KF ++ EAY +L D  +R  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 102 YD 103
           YD
Sbjct: 65  YD 66

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + +    +EIR A+ RL+ ++HPD+N  +     KF ++ EAY +L D  +R  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 102 YD 103
           YD
Sbjct: 65  YD 66

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 41  THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHD-KFVKLNEAYSILNDMDRR 99
           ++YEIL++ R+ S  +I+ A+ R + Q+HPDKNP N    + KF ++ EAY +L+D  +R
Sbjct: 3   SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 100 RNYD 103
             YD
Sbjct: 63  EIYD 66

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+IL + ++ S ++I+ AF +L+ ++HPDKN S P    KF ++ EAY  L+D +RR+ 
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKE 67
Query: 102 YD 103
           YD
Sbjct: 68  YD 69

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 35  SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILN 94
           SSG    +YEIL + R  S ++++ A+ RL+ +FHPDKN + P   + F  +  AY++L+
Sbjct: 2   SSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLS 60
Query: 95  DMDRRRNYD 103
           + ++R+ YD
Sbjct: 61  NPEKRKQYD 69

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKL-NEAYSILNDMDRRR 100
           +YE+L ++ + SP++I+ A+ +L+ ++HPDKNP N    +K  KL +EAY +L+D  +R 
Sbjct: 11  YYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70
Query: 101 NYD 103
            YD
Sbjct: 71  LYD 73

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHD-KFVKLNEAYSILNDMDRRR 100
           +YE+L++ R  S + I+ A+ +L+ ++HPDKNP N    + +F ++ EAY +L+D  +R 
Sbjct: 11  YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70
Query: 101 NYD 103
            YD
Sbjct: 71  IYD 73

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + +    +EIR A+ RL+ ++HPD+N  +     KF ++ EAY +L D  +R  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 102 YD 103
           YD
Sbjct: 65  YD 66

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 38  QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMD 97
           ++ T+Y++L ++ N + +E++ A+ +L+ ++HPDKNP+     +KF ++++AY +L+D  
Sbjct: 4   KETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNE---GEKFKQISQAYEVLSDAK 60
Query: 98  RRRNYD 103
           +R  YD
Sbjct: 61  KRELYD 66

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+ L L R  S +EI+ A+ R + ++HPDKN   P   +KF ++ EAY +L+D  +R  
Sbjct: 5   YYQTLGLARGASDEEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 102 YD 103
           +D
Sbjct: 64  FD 65

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y++L ++ + S  E++ A+ +++ +FHPDKNP      ++F ++++AY +L+D  +R+ 
Sbjct: 10  YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGA---EQFKQISQAYEVLSDEKKRQI 66
Query: 102 YD 103
           YD
Sbjct: 67  YD 68

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y IL ++     K I++A+ RL++++HPD +  N A   KF  L EA+ +L D  RR  
Sbjct: 30  YYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDA-EAKFKDLAEAWEVLKDEQRRAE 88
Query: 102 YD 103
           YD
Sbjct: 89  YD 90

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y++L +    +  +I++A+ R    +HPD+N  +    ++F ++++AY +L     RR Y
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKY 79
Query: 103 DASL 106
           D  L
Sbjct: 80  DRGL 83

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 26  TGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVK 85
           +G+     Y S     +Y +L  +   S ++I + F   + + HPDK+P NP   + F K
Sbjct: 6   SGMDAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQK 65
Query: 86  LNEAYSILNDMDRRRNYD 103
           L +A  IL + + R  YD
Sbjct: 66  LQKAKEILTNEESRARYD 83

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y I+ ++     K I++A+ RL++++HPD +   P    +F ++ EA+ +L+D  RR  
Sbjct: 7   YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVS-KEPDAEARFKEVAEAWEVLSDEQRRAE 65
Query: 102 YD 103
           YD
Sbjct: 66  YD 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	244
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-21
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-20
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	6e-20
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	6e-20
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	9e-20
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	1e-19
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	7e-19
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	5e-18
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	5e-18
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	1e-17
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	2e-17
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	2e-17
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	2e-17
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-17
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	3e-17
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	3e-17
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	6e-17
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	6e-17
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-16
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	1e-15
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-15
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	8e-15
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-14
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	8e-13
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	3e-12
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	3e-12
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	2e-11
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-10
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	2e-09
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	8e-09
2guz_A	71	Mitochondrial import inner membrane translocase su	9e-09
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	4e-08
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	7e-06
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	1e-05

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 88.0 bits (218), Expect = 2e-21
 Identities = 29/61 (47%), Positives = 41/61 (67%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N AY +L D D R+ Y
Sbjct: 5   YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 64

Query: 103 D 103
           D
Sbjct: 65  D 65

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 82.7 bits (205), Expect = 1e-20
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YEIL + +    +EIR A+ RL+ ++HPD+N  +     KF ++ EAY +L D  +R  Y
Sbjct: 6   YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAY 65

Query: 103 D 103
           D
Sbjct: 66  D 66

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 80.0 bits (198), Expect = 6e-20
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y+IL + RN S KEI+ A+ +L+K++HPD N  +P   +KF +L EAY +L+D  +R+ Y
Sbjct: 10  YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQY 69

Query: 103 D 103
           D
Sbjct: 70  D 70

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 80.9 bits (200), Expect = 6e-20
 Identities = 25/61 (40%), Positives = 42/61 (68%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y +L L++N +  +I+ ++ +L+ ++HPDKNP NP   DKF ++N A++IL D  +R  Y
Sbjct: 20  YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIY 79

Query: 103 D 103
           D
Sbjct: 80  D 80

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 80.6 bits (199), Expect = 9e-20
 Identities = 24/78 (30%), Positives = 39/78 (50%)

Query: 26  TGLCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVK 85
           +G+     Y S     +Y +L  +   S ++I + F   + + HPDK+P NP   + F K
Sbjct: 6   SGMDAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQK 65

Query: 86  LNEAYSILNDMDRRRNYD 103
           L +A  IL + + R  YD
Sbjct: 66  LQKAKEILTNEESRARYD 83

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 80.2 bits (198), Expect = 1e-19
 Identities = 17/61 (27%), Positives = 35/61 (57%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y++L +    +  +I++A+ R    +HPD+N  +    ++F ++++AY +L     RR Y
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKY 79

Query: 103 D 103
           D
Sbjct: 80  D 80

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score = 83.1 bits (206), Expect = 7e-19
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y IL ++     K I++A+ RL++++HPD +  N A   KF  L EA+ +L D  RR  Y
Sbjct: 31  YAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDA-EAKFKDLAEAWEVLKDEQRRAEY 89

Query: 103 DA 104
           D 
Sbjct: 90  DQ 91

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 77.2 bits (190), Expect = 5e-18
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 41  THYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALH------DKFVKLNEAYSILN 94
             Y IL  + + +  +++  + +L   +HPDK  ++           KF+++++A+ IL 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 95  DMDRRRNYDASLNLQTVRQNMFVH 118
           + + +R YD       +R    V 
Sbjct: 71  NEETKREYDLQRCEDDLRNVGPVD 94

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 81.7 bits (201), Expect = 5e-18
 Identities = 31/119 (26%), Positives = 50/119 (42%)

Query: 29  CCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNE 88
             +       D   Y +L + +  S +EIR AF +L+ + HPDKNP+NP  H  F+K+N 
Sbjct: 10  HSSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINR 69

Query: 89  AYSILNDMDRRRNYDASLNLQTVRQNMFVHKTRARSSYSDSGERPENWKDYYDFAAQMK 147
           AY +L D D R+ YD              +++ +   Y       +      +      
Sbjct: 70  AYEVLKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDA 128

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 74.7 bits (184), Expect = 1e-17
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y+IL + ++ S ++I+ AF +L+ ++HPDKN  +P    KF ++ EAY  L+D +RR+ Y
Sbjct: 10  YDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEY 68

Query: 103 D 103
           D
Sbjct: 69  D 69

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL-HDKFVKLNEAYSILNDMDRRRN 101
           YE+L ++ + SP++I+ A+ +L+ ++HPDKNP N      KF  ++EAY +L+D  +R  
Sbjct: 12  YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71

Query: 102 YD 103
           YD
Sbjct: 72  YD 73

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 73.4 bits (181), Expect = 2e-17
 Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           YEIL + R  S ++++ A+ RL+ +FHPDKN +  A  + F  +  AY++L++ ++R+ Y
Sbjct: 10  YEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGA-TEAFKAIGTAYAVLSNPEKRKQY 68

Query: 103 D 103
           D
Sbjct: 69  D 69

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 73.9 bits (182), Expect = 2e-17
 Identities = 23/61 (37%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y +L + R  S  +I+ A+ +L++++HPDKN  +P   D+F+++++AY IL++ ++R NY
Sbjct: 20  YRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNY 78

Query: 103 D 103
           D
Sbjct: 79  D 79

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 73.4 bits (181), Expect = 2e-17
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL-HDKFVKLNEAYSILNDMDRRRN 101
           YE+L++ R  S + I+ A+ +L+ ++HPDKNP N      +F ++ EAY +L+D  +R  
Sbjct: 12  YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDI 71

Query: 102 YD 103
           YD
Sbjct: 72  YD 73

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 73.0 bits (180), Expect = 3e-17
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y+ L L R  S +EI+ A+ R + ++HPDKN    A  +KF ++ EAY +L+D  +R  +
Sbjct: 6   YQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGA-EEKFKEIAEAYDVLSDPRKREIF 64

Query: 103 D 103
           D
Sbjct: 65  D 65

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 73.2 bits (180), Expect = 3e-17
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
            +++L ++   S  E+  A+ +L+   HPDK    P   D F  +  A + L    +   
Sbjct: 29  SWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP 87

Query: 102 YDA 104
              
Sbjct: 88  SSG 90

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 72.8 bits (179), Expect = 6e-17
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL-HDKFVKLNEAYSILNDMDRRRN 101
           YEIL++ R+ S  +I+ A+ R + Q+HPDKNP N      KF ++ EAY +L+D  +R  
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 72.7 bits (179), Expect = 6e-17
 Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 3/61 (4%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNY 102
           Y++L +  + + +E++  + + + ++HPDK   +    +KF +++EA+ ILND  +R  Y
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIY 67

Query: 103 D 103
           D
Sbjct: 68  D 68

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 72.1 bits (177), Expect = 1e-16
 Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALH------DKFVKLNEAYSILNDM 96
           Y IL  + + +  +++  + +L   +HPDK  ++           KF+++++A+ IL + 
Sbjct: 19  YSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE 78

Query: 97  DRRRNYD 103
           + ++ YD
Sbjct: 79  ETKKKYD 85

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 68.4 bits (168), Expect = 1e-15
 Identities = 20/66 (30%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 38  QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMD 97
           ++  +Y++L ++ + S  E++ A+ +++ +FHPDKNP      ++F ++++AY +L+D  
Sbjct: 6   KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEK 62

Query: 98  RRRNYD 103
           +R+ YD
Sbjct: 63  KRQIYD 68

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 71.1 bits (174), Expect = 2e-15
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 42  HYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRR 99
             ++L LER+   +   +R A+++  K+FHPDK        +K  K+N  Y  + D  + 
Sbjct: 13  LMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKY 68

Query: 100 RNYD 103
            +  
Sbjct: 69  AHQP 72

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 67.5 bits (165), Expect = 8e-15
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 43  YEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100
            ++L LER+   +   +R A+++  K+FHPDK        +K  K+N  Y  + D  +  
Sbjct: 11  MDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYA 66

Query: 101 NYD 103
           +  
Sbjct: 67  HQP 69

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 65.9 bits (161), Expect = 3e-14
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 43  YEILELERN-CSPKEIRSAFIRLSKQFHPDKNPSNPAL---HDKFVKLNEAYSILNDMDR 98
           Y++LE+ R     +++  A+  L+++ HPD+  +        ++F  +  AY  L D + 
Sbjct: 18  YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77

Query: 99  RRNYD 103
           + NYD
Sbjct: 78  KTNYD 82

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 61.3 bits (149), Expect = 8e-13
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHD-KFVKLNEAYSILNDMDRRRN 101
             ++E        E +    RL  ++HPDKNP N  + +  F  L    + L   +++  
Sbjct: 19  TSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQAF 75

Query: 102 YD 103
            D
Sbjct: 76  LD 77

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 62.3 bits (151), Expect = 3e-12
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 42  HYEILELERNCS--PKEIRSAFIRLSKQFHPDKNPSNPAL-----HDKFVKLNEAYSILN 94
           ++ +  L        + +   F  L +Q+HPDK  S           +   +N+A+  L 
Sbjct: 3   YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 95  DMDRRRNYDASLN 107
               R  Y  SL+
Sbjct: 63  HPLMRAEYLLSLH 75

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 10/74 (13%)

Query: 41  THYEILELERNCSP-------KEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSIL 93
           T YE+                  +R  + +L  Q HPD         ++   LN+AY  L
Sbjct: 12  TFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGS---EQSSTLNQAYHTL 68

Query: 94  NDMDRRRNYDASLN 107
            D  RR  Y   L 
Sbjct: 69  KDPLRRSQYMLKLL 82

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 6/65 (9%)

Query: 43  YEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100
            E+L+L R        ++ A+ + S   HPDK  S    H    +LN  +          
Sbjct: 14  LELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNL 69

Query: 101 NYDAS 105
             +  
Sbjct: 70  RMNLG 74

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL---HDKFVKLNEAYSILNDMDR 98
           +Y+IL ++RN   +EI  A+ +L+ Q+HPD   +         KF+ +  A  +L+D + 
Sbjct: 384 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 443

Query: 99  RRNYDA 104
           R+ +D 
Sbjct: 444 RKKFDD 449

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 53.2 bits (127), Expect = 8e-09
 Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 13/120 (10%)

Query: 3   SHLC-SCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELER--NCSPKEIRS 59
              C +C        +  FF        C    +      ++ +++  R       +++ 
Sbjct: 10  YPRCWNCGGPWGPGREDRFFCPQ-----CRALQAPDPTRDYFSLMDCNRSFRVDTAKLQH 64

Query: 60  AFIRLSKQFHPDKNPSNPAL-----HDKFVKLNEAYSILNDMDRRRNYDASLNLQTVRQN 114
            + +L +  HPD                   +N+AY  L     R  Y   L+   + + 
Sbjct: 65  RYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIPER 124

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 43  YEILELERNC-SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100
            +IL L  N  + K+++    ++    HPDK  S         K+NEA   L      +
Sbjct: 17  LQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKRGISK 71

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 51.0 bits (121), Expect = 4e-08
 Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALH---DKFVKLNEAYSILNDMDRR 99
           ++ + +    +P++++  + +     HPDK    P        F++LN+A+S   +  ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 100 RNY 102
             Y
Sbjct: 180 PLY 182

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 42.7 bits (100), Expect = 7e-06
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHD-------KFVKLNEAYSILN 94
           ++ + L        +R ++ R     HPDK     A  +        F  L EA+   N
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 43 YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPAL---HDKFVKLNEAYSILND 95
          ++ + +    +P++++  + +     HP K    P        F++LN+A+S   +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.87
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.86
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.86
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.86
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.86
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.84
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.84
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.84
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.84
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.84
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.84
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.83
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.83
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.82
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.82
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.81
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.78
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.78
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.77
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.76
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.76
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.75
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.72
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.7
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.68
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.68
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.68
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.65
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.64
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.63
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.6
2guz_A	71	Mitochondrial import inner membrane translocase su	99.59
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.57
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.98
2guz_B	65	Mitochondrial import inner membrane translocase su	98.71
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	90.85

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=2.7e-22  Score=144.21  Aligned_cols=74  Identities=43%  Similarity=0.719  Sum_probs=69.3

Q ss_pred             CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +++...|||+||||+++++.++||++|++|++++|||++++++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus         2 s~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   75 (79)
T 2dn9_A            2 SSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG   75 (79)
T ss_dssp             CSSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred             CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence            34567899999999999999999999999999999999987788999999999999999999999999998865

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=6.9e-22  Score=141.73  Aligned_cols=73  Identities=36%  Similarity=0.647  Sum_probs=68.2

Q ss_pred             CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +++...|||+||||+++++.++||++|++|++++|||+++ .+.+.+.|+.|++||+||+||.+|..||..+..
T Consensus         2 s~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~   74 (78)
T 2ctp_A            2 SSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG   74 (78)
T ss_dssp             CCSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred             CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence            3456789999999999999999999999999999999998 688999999999999999999999999998865

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=7.5e-22  Score=144.85  Aligned_cols=73  Identities=38%  Similarity=0.697  Sum_probs=68.4

Q ss_pred             CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +++...|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus         2 s~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   74 (88)
T 2ctr_A            2 SSGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHS   74 (88)
T ss_dssp             CSCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHH
T ss_pred             CCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence            3456789999999999999999999999999999999998 788999999999999999999999999999865

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.86  E-value=1.1e-21  Score=140.37  Aligned_cols=69  Identities=35%  Similarity=0.604  Sum_probs=65.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   70 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE   70 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence            469999999999999999999999999999999998 577899999999999999999999999998865

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=8.5e-22  Score=147.66  Aligned_cols=74  Identities=26%  Similarity=0.530  Sum_probs=69.1

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      .....|||+||||+++|+.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+...
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~   86 (99)
T 2yua_A           13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSD   86 (99)
T ss_dssp             SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred             CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccc
Confidence            45578999999999999999999999999999999999877889999999999999999999999999988653

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=2.8e-21  Score=139.82  Aligned_cols=73  Identities=34%  Similarity=0.587  Sum_probs=67.1

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      +....|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   78 (82)
T 2ej7_A            5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG   78 (82)
T ss_dssp             CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence            44568999999999999999999999999999999999855 46788999999999999999999999998865

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=3e-21  Score=142.66  Aligned_cols=73  Identities=36%  Similarity=0.607  Sum_probs=67.2

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .....|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|+.|++||+||+||.+|..||..+..
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   78 (92)
T 2dmx_A            5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCD   78 (92)
T ss_dssp             CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSC
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence            34567999999999999999999999999999999999855 47889999999999999999999999999865

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.84  E-value=1.7e-21  Score=144.49  Aligned_cols=73  Identities=21%  Similarity=0.481  Sum_probs=67.3

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN------PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~------~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      ....|||+||||+++|+.++||++|++|++++|||+++.+      +.+.+.|+.|++||+||+||.+|..||..+..+
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~   91 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSGP   91 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCCS
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccCC
Confidence            4578999999999999999999999999999999998743      568899999999999999999999999999763

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=3.5e-21  Score=141.28  Aligned_cols=72  Identities=35%  Similarity=0.705  Sum_probs=67.2

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .....|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus        13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   84 (88)
T 2cug_A           13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG   84 (88)
T ss_dssp             CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence            345789999999999999999999999999999999998 578899999999999999999999999998865

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=5.5e-21  Score=145.68  Aligned_cols=75  Identities=36%  Similarity=0.657  Sum_probs=69.7

Q ss_pred             CCCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          34 YSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        34 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..+....|||+||||+++|+.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+..
T Consensus        11 ~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~   85 (109)
T 2ctw_A           11 SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL   85 (109)
T ss_dssp             CTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred             ccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence            345667899999999999999999999999999999999997788999999999999999999999999998854

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=2.9e-21  Score=147.88  Aligned_cols=74  Identities=30%  Similarity=0.432  Sum_probs=69.1

Q ss_pred             CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ......|||+||||+++|+.++||+||++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+..
T Consensus        15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~   88 (112)
T 2ctq_A           15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS   88 (112)
T ss_dssp             CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence            34557899999999999999999999999999999999987788999999999999999999999999998865

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.83  E-value=6.1e-21  Score=135.13  Aligned_cols=68  Identities=29%  Similarity=0.661  Sum_probs=62.0

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      ....|||+||||+++++.++||++|++|++++|||++++.   .+.|+.|++||++|+||.+|..||..|.
T Consensus         5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            3567999999999999999999999999999999999743   5789999999999999999999999874

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.83  E-value=7.5e-21  Score=142.52  Aligned_cols=69  Identities=39%  Similarity=0.641  Sum_probs=64.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.++||++|++|++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~   71 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE   71 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence            4899999999999999999999999999999999855 46889999999999999999999999998755

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.82  E-value=1.8e-20  Score=138.55  Aligned_cols=69  Identities=26%  Similarity=0.546  Sum_probs=63.7

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      ...|||+||||+++++.++||++|++|++++|||+++++   .+.|+.|++||+||+||.+|..||..+...
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   74 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA   74 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence            467999999999999999999999999999999999754   469999999999999999999999988653

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.82  E-value=5.2e-21  Score=144.35  Aligned_cols=71  Identities=34%  Similarity=0.638  Sum_probs=66.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      ..|||+||||+++++.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+...
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   72 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA   72 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence            46999999999999999999999999999999999876888999999999999999999999999998663

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.81  E-value=1.4e-20  Score=143.28  Aligned_cols=72  Identities=25%  Similarity=0.472  Sum_probs=66.2

Q ss_pred             CCccCcccccccCCCC-CHHHHHHHHHHHHHhhCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNC-SPKEIRSAFIRLSKQFHPDKNPS---NPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a-~~~eIk~ay~~l~~~~HPD~~~~---~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ....|||+||||+++| +.++||+||++|++++|||++++   .+.+.+.|+.|++||+||+||.+|..||..+..
T Consensus        12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            3468999999999999 99999999999999999999984   267889999999999999999999999998854

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.78  E-value=1.7e-19  Score=152.08  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=75.3

Q ss_pred             cccccccCCCccCccchhhhhhcccccccccCCCCCccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH--
Q psy5201           3 SHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA--   78 (244)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~--   78 (244)
                      ..||.|.....-.....++|..+     ....+.....|||+||||+++  ++.++||++||+|++++|||++++.+.  
T Consensus        11 ~~Cw~C~~~~~~~~~~~~fC~~c-----~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e   85 (207)
T 3bvo_A           11 PRCWNCGGPWGPGREDRFFCPQC-----RALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTE   85 (207)
T ss_dssp             CBCSSSCCBCCSSCSCCCBCTTT-----CCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHH
T ss_pred             CCCCCCCCCcccccccccccccc-----cccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence            46889976421111122222222     222233457899999999986  799999999999999999999985532  


Q ss_pred             ---HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          79 ---LHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        79 ---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                         +.+.|+.|++||+||+||.+|..||..+.+
T Consensus        86 ~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G  118 (207)
T 3bvo_A           86 KDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHG  118 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence               567899999999999999999999987754

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.78  E-value=2.5e-19  Score=144.56  Aligned_cols=74  Identities=22%  Similarity=0.475  Sum_probs=66.8

Q ss_pred             CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP------ALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~------~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      .....|||+||||+++++.++||+||++|++++|||+++..+      .+.+.|..|++||+||+||.+|+.||..+...
T Consensus         6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~   85 (155)
T 2l6l_A            6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCED   85 (155)
T ss_dssp             CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHH
T ss_pred             cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchh
Confidence            455689999999999999999999999999999999998653      36789999999999999999999999988653

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.77  E-value=5e-19  Score=148.17  Aligned_cols=69  Identities=42%  Similarity=0.779  Sum_probs=66.1

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .|||+||||+++|+.++||+|||+|++++|||++++++.+.++|+.|++||++|+||.+|+.||..+..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~   70 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK   70 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccc
Confidence            489999999999999999999999999999999987888999999999999999999999999998865

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.76  E-value=4.5e-20  Score=141.54  Aligned_cols=68  Identities=25%  Similarity=0.371  Sum_probs=61.7

Q ss_pred             ccCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccccc
Q psy5201          39 DHTHYEILELERNCSP--KEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQT  110 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~--~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~  110 (244)
                      ..++|+||||+++|+.  ++||+|||+|++++|||++++    .++|+.|++||+||+||.+|+.||.++..|.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~   76 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccc
Confidence            4689999999999998  999999999999999999874    4789999999999999999999998765543

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=3.6e-19  Score=131.05  Aligned_cols=61  Identities=23%  Similarity=0.378  Sum_probs=57.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHH
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR  100 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~  100 (244)
                      ..|||+||||+++|+.++||++|++|+++||||+++ ++.+.+.|+.|++||++|+||.+|.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~   86 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG   86 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence            479999999999999999999999999999999998 6788999999999999999998774

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.72  E-value=3.3e-18  Score=140.13  Aligned_cols=68  Identities=24%  Similarity=0.348  Sum_probs=62.8

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          41 THYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        41 ~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      |||+||||++++  +..+||++|++|+++||||++++.+.     +.+.|..|++||+||+||.+|..||..+.+
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g   76 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHG   76 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcC
Confidence            799999999999  99999999999999999999986543     567999999999999999999999998865

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.70  E-value=6.8e-19  Score=144.00  Aligned_cols=69  Identities=25%  Similarity=0.365  Sum_probs=60.1

Q ss_pred             CCccCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201          37 GQDHTHYEILELERNCS--PKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ  109 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~--~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~  109 (244)
                      ....|+|+||||+++|+  .++||+|||++++++|||++++    .++|+.|++||+||+||.+|+.||..+..+
T Consensus         8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~~w   78 (174)
T 2pf4_E            8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW   78 (174)
T ss_dssp             HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGGCC
T ss_pred             cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCCcc
Confidence            34579999999999998  6999999999999999999874    378999999999999999999999998654

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.68  E-value=2.3e-18  Score=154.56  Aligned_cols=70  Identities=31%  Similarity=0.537  Sum_probs=0.0

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ...|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~   95 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH   95 (329)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence            3579999999999999999999999999999999998 568899999999999999999999999998543

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.68  E-value=7.7e-18  Score=123.37  Aligned_cols=63  Identities=22%  Similarity=0.276  Sum_probs=57.4

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHH
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRR   99 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R   99 (244)
                      ....++|+||||+++|+.++||+||++|+++||||+++++ +.+.+.|+.|++||++|+|...|
T Consensus        13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r   76 (88)
T 1iur_A           13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL   76 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence            4457999999999999999999999999999999999866 45889999999999999988665

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.68  E-value=7.4e-18  Score=121.09  Aligned_cols=62  Identities=21%  Similarity=0.311  Sum_probs=56.1

Q ss_pred             CccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy5201          38 QDHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYD  103 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD  103 (244)
                      ...++|+||||+++  ++.++||+||++|++++|||+++ +   .+.|++|++||++|+|+.+|..++
T Consensus         9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A            9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence            34689999999999  99999999999999999999986 3   578999999999999999998743

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.65  E-value=1.6e-17  Score=136.78  Aligned_cols=64  Identities=20%  Similarity=0.445  Sum_probs=58.8

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHH
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPA---LHDKFVKLNEAYSILNDMDRRRNY  102 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~---~~~~f~~i~~Ay~vL~dp~~R~~Y  102 (244)
                      ..|+|+||||+++|+.++||+||+++++++|||++++.+.   +.+.|+.|++||+||+||.+|+.|
T Consensus       116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            3699999999999999999999999999999999986543   789999999999999999998765

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.64  E-value=4.8e-17  Score=134.30  Aligned_cols=70  Identities=29%  Similarity=0.404  Sum_probs=62.7

Q ss_pred             CCCccCccccc------ccCC-CCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcc-c
Q psy5201          36 SGQDHTHYEIL------ELER-NCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASL-N  107 (244)
Q Consensus        36 ~~~~~~~Y~iL------gv~~-~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~-~  107 (244)
                      .....|||+||      |+++ +++.++||++||+|++++|||++++   +.+.|..|++||+||+||.+|..||..+ .
T Consensus         7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~   83 (181)
T 3uo3_A            7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLLR   83 (181)
T ss_dssp             CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHHh
Confidence            34568999999      4665 8999999999999999999999984   6788999999999999999999999987 4


Q ss_pred             c
Q psy5201         108 L  108 (244)
Q Consensus       108 ~  108 (244)
                      +
T Consensus        84 g   84 (181)
T 3uo3_A           84 N   84 (181)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.63  E-value=5.2e-17  Score=119.61  Aligned_cols=56  Identities=20%  Similarity=0.418  Sum_probs=51.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q psy5201          40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP---ALHDKFVKLNEAYSILND   95 (244)
Q Consensus        40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~---~~~~~f~~i~~Ay~vL~d   95 (244)
                      .++|++|||+++|+.++||+|||+++++||||++++++   .+.+.|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58899999999999999999999999999999998654   378899999999999974

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.60  E-value=2.6e-16  Score=119.13  Aligned_cols=58  Identities=19%  Similarity=0.283  Sum_probs=51.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPS---NP----ALHDKFVKLNEAYSILNDMD   97 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~---~~----~~~~~f~~i~~Ay~vL~dp~   97 (244)
                      ..|||+|||++. |+.++||+|||++++++|||++++   ++    .+.++|+.|++||++|+|+.
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            479999999996 999999999999999999999863   11    46889999999999999985

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.59  E-value=2.7e-16  Score=110.62  Aligned_cols=57  Identities=23%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             ccCcccccccCC-CCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q psy5201          39 DHTHYEILELER-NCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRR   99 (244)
Q Consensus        39 ~~~~Y~iLgv~~-~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R   99 (244)
                      ..++|+||||++ +++.++||++|++|++++|||+++ +   .+.|+.|++||++|+|+..|
T Consensus        13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence            468999999999 799999999999999999999964 3   36899999999999988654

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.57  E-value=2e-16  Score=155.69  Aligned_cols=72  Identities=42%  Similarity=0.769  Sum_probs=40.8

Q ss_pred             CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..+.|||+||||+++|+.++||+|||+|++++|||++++++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus        18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~   89 (780)
T 3apo_A           18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK   89 (780)
T ss_dssp             -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC---
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccc
Confidence            456899999999999999999999999999999999987788999999999999999999999999998865

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.98  E-value=3.1e-10  Score=101.71  Aligned_cols=66  Identities=30%  Similarity=0.569  Sum_probs=56.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHh
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDRRRNYDA  104 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~---~~~~~~f~~i~~Ay~vL~dp~~R~~YD~  104 (244)
                      ..++|++||+.+.++.++|+++|+++++++|||+.+..   +.+.+.|+.|.+||++|+||.+|..||.
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            34899999999999999999999999999999998743   3478899999999999999999999996

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.71  E-value=9.3e-09  Score=70.56  Aligned_cols=51  Identities=20%  Similarity=0.126  Sum_probs=44.3

Q ss_pred             CcccccccCCC---CCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q psy5201          41 THYEILELERN---CSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND   95 (244)
Q Consensus        41 ~~Y~iLgv~~~---a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~d   95 (244)
                      .-|+||||+++   ++.++|+++|++|....|||+.+ +   .-....|++|.++|..
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHH
Confidence            45889999999   99999999999999999999975 3   3556889999999853

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=90.85  E-value=0.15  Score=49.00  Aligned_cols=48  Identities=8%  Similarity=0.169  Sum_probs=38.6

Q ss_pred             CCccCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHH
Q psy5201          37 GQDHTHYEILELERNCSP--KEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSI   92 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a~~--~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~v   92 (244)
                      ...+++|.|||++.+...  .+|+++||++++..+++        .+++..|..|+.|
T Consensus       626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            445679999999877655  77999999999965443        4789999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	244
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	1e-14
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-14
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-13
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	1e-11
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	1e-11
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	4e-10
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-07
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-06

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 64.6 bits (157), Expect = 1e-14
 Identities = 24/62 (38%), Positives = 38/62 (61%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +YEIL + +    +EIR A+ RL+ ++HPD+N  +     KF ++ EAY +L D  +R  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 102 YD 103
           YD
Sbjct: 65  YD 66

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.6 bits (157), Expect = 3e-14
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 28  LCCNQRYSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP---ALHDKFV 84
           L            T ++ + +    +P++++  + +     HPDK    P        F+
Sbjct: 21  LLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFM 80

Query: 85  KLNEAYSILNDMDRRRNY 102
           +LN+A+S   +  ++  Y
Sbjct: 81  ELNDAWSEFENQGQKPLY 98

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.6 bits (149), Expect = 3e-13
 Identities = 14/72 (19%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDK------FVKLNEAYSILND 95
            Y IL  + + +  +++  + +L   +HPDK  ++            F+++++A+ IL +
Sbjct: 18  WYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGN 77

Query: 96  MDRRRNYDASLN 107
            + ++ YD   +
Sbjct: 78  EETKKKYDLQRS 89

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-11
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 42  HYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRN 101
           +Y+ L L R  S +EI+ A+ R + ++HPDKN    A  +KF ++ EAY +L+D  +R  
Sbjct: 5   YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGA-EEKFKEIAEAYDVLSDPRKREI 63

Query: 102 YD 103
           +D
Sbjct: 64  FD 65

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 57.0 bits (137), Expect = 1e-11
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 42  HYEILELERNCS--PKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILN 94
           ++ +  L        + +   F  L +Q+HPDK  S           +   +N+A+  L 
Sbjct: 3   YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 95  DMDRRRNYDASLN 107
               R  Y  SL+
Sbjct: 63  HPLMRAEYLLSLH 75

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 52.7 bits (126), Expect = 4e-10
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 35  SSGQDHTHYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSI 92
           S        E+L+L R        ++ A+ + S   HPDK  S    H    +LN  +  
Sbjct: 6   SRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGT 61

Query: 93  LNDMDRRRNYDA 104
                     + 
Sbjct: 62  FKTEVYNLRMNL 73

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 2e-07
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 43  YEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALH-DKFVKLNEAYSILNDMDRRRN 101
             ++E        E +    RL  ++HPDKNP N  +  + F  L    + L        
Sbjct: 19  TSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78

Query: 102 YD 103
             
Sbjct: 79  NA 80

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 43.2 bits (101), Expect = 2e-06
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 42  HYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRR 99
             ++L LER+   +   +R A+++  K+FHPDK        +K  K+N  Y  + D  + 
Sbjct: 10  LMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKY 65

Query: 100 RNYD 103
            +  
Sbjct: 66  AHQP 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.9
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.85
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.8
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.75
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.71
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.63
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.62

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=4.3e-24  Score=150.65  Aligned_cols=70  Identities=34%  Similarity=0.648  Sum_probs=66.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..|||+||||+++||.++||+||+++++++|||++++++.+.+.|..|++||+||+||.+|..||.+|..
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~   71 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHA   71 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTS
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcc
Confidence            4799999999999999999999999999999999997788999999999999999999999999998855

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2e-22  Score=142.70  Aligned_cols=69  Identities=35%  Similarity=0.604  Sum_probs=65.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      .+|||+||||+++||.++||+||+++++++|||+++ .+.+.++|..|++||+||+||.+|+.||.++..
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~   70 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE   70 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhh
Confidence            369999999999999999999999999999999998 677889999999999999999999999998866

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=6.5e-22  Score=145.14  Aligned_cols=71  Identities=21%  Similarity=0.500  Sum_probs=65.4

Q ss_pred             CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN------PALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~------~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ...|||+||||+++|+.++||++|++|++++|||+++..      +.+.+.|+.|++||+||+||.+|+.||..+.+
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~   90 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG   90 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccCC
Confidence            457999999999999999999999999999999998754      45778999999999999999999999998765

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.80  E-value=2.4e-21  Score=146.98  Aligned_cols=66  Identities=26%  Similarity=0.420  Sum_probs=60.1

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          39 DHTHYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ..++|+||||+++|  +.++||+||++||+++|||+++ +   .++|++|++||+||+||.+|+.||..+..
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~-~---~e~F~~I~~AY~vLsd~~kR~~YD~~~~~   74 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGG-D---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF   74 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCC-T---TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchh-h---HHHHHHHHHHHHHhCCHHHHHHHhccCCC
Confidence            46899999999999  7889999999999999999997 3   35799999999999999999999987655

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=3.8e-19  Score=125.18  Aligned_cols=67  Identities=25%  Similarity=0.388  Sum_probs=59.5

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCCh-----HHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201          41 THYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNP-----ALHDKFVKLNEAYSILNDMDRRRNYDASLN  107 (244)
Q Consensus        41 ~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~-----~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~  107 (244)
                      |||+||||++++  +.++||++|+++++++|||+..+.+     .+.+.|..|++||+||+||.+|..|+..+.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l~   75 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence            899999999854  5899999999999999999977542     366789999999999999999999998764

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.71  E-value=5.3e-19  Score=125.09  Aligned_cols=68  Identities=19%  Similarity=0.244  Sum_probs=60.8

Q ss_pred             CCccCcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201          37 GQDHTHYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL  108 (244)
Q Consensus        37 ~~~~~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~  108 (244)
                      ....++|+||||++++  +.++||+||+++++++|||+++ +   .+.|++|++||++|+|+.+|..||..+..
T Consensus         8 ~~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g-~---~e~~~~in~Ay~~L~d~~~r~~~~~~~~~   77 (79)
T d1fafa_           8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLRMNLGGTG   77 (79)
T ss_dssp             HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC-C---HHHHHHHHHHHHHHCCHHHHHHHccCCCC
Confidence            3457999999999988  9999999999999999999986 4   46899999999999999999999876543

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.63  E-value=1.6e-17  Score=122.26  Aligned_cols=64  Identities=20%  Similarity=0.445  Sum_probs=57.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh---HHHHHHHHHHHHHHHcCChhHHHHH
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP---ALHDKFVKLNEAYSILNDMDRRRNY  102 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~---~~~~~f~~i~~Ay~vL~dp~~R~~Y  102 (244)
                      ..+.|++|||+..++.++||+||+++++.+|||++++.+   .+.+.|..|++||++|+||.+|+.|
T Consensus        32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            457799999999999999999999999999999987542   3788999999999999999999766

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.3e-17  Score=117.44  Aligned_cols=65  Identities=23%  Similarity=0.318  Sum_probs=56.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHHhcc
Q psy5201          39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP-ALHDKFVKLNEAYSILNDMDRRRNYDASL  106 (244)
Q Consensus        39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~-~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~  106 (244)
                      -.++|+||||+++||.+|||+||++|+++||||++++++ .+.+.|+.|++||++|++   +..||...
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~   80 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNA   80 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSS
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccc
Confidence            369999999999999999999999999999999998764 588999999999999964   45555444