Psyllid ID: psy5326

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MHLVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Secondary Structure (PSIPRED)
cEEEEEEccccccccccHHHHHHHcccHHHHccccccccccEEEccccccHHHHHHHHHHHccHHHHHHcccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccHHHHHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHccccHcccccEEEEEEEccccccccccccHHHccccccccccccccccccccEEEEcccccHHHHHHHHcc
Coil and Loop (DISEMBL)
mhlvyfkipdnklstQDLHARYEGlikededkiipglgengragtlpgltndIITKIMKIEAFNKVLSDHIsytrkipdarfpechelkydedlptiggfswsghytwipipdfdtrimnnptdpvppdfknlehppikcitftptplekildtalc
Flexible Loop (DISEMBL)
mhlvyfkipdnklstqDLHARYEGLikededkiipglgengragtlpgLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKcitftptpleKILDTALC
Low Complexity Region (SEG)
MHLVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Disordered region (IsUnstruct)
**LVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMN***********NLEHPPIKCITFTPTPLEKIL*****
Disordered Region (DISOPRED)
MHLVYF***************Y*G********************************IMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Disordered Region (DISEMBL)
MHLVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Disordered Region (DISPRO)
MHLVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHLVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNNPTDPVPPDFKNLEHPPIKCITFTPTPLEKILDTALC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q6WV16	666	N-acetylgalactosaminyltra	yes	N/A	0.445	0.105	0.408	4e-07
Q6WV20	601	Polypeptide N-acetylgalac	no	N/A	0.554	0.144	0.352	2e-06
Q8IA44	563	Putative polypeptide N-ac	no	N/A	0.375	0.104	0.409	7e-05
Q29121	559	Polypeptide N-acetylgalac	yes	N/A	0.592	0.166	0.308	0.0004
A8Y236	629	Putative polypeptide N-ac	N/A	N/A	0.490	0.122	0.329	0.0004
Q6UE39	556	Polypeptide N-acetylgalac	yes	N/A	0.382	0.107	0.35	0.0006
Q8CF93	556	Polypeptide N-acetylgalac	yes	N/A	0.382	0.107	0.35	0.0006
Q8IUC8	556	Polypeptide N-acetylgalac	yes	N/A	0.382	0.107	0.35	0.0007
Q10473	559	Polypeptide N-acetylgalac	no	N/A	0.388	0.109	0.327	0.0007
Q9Y117	667	Polypeptide N-acetylgalac	no	N/A	0.401	0.094	0.333	0.0007

>sp|Q6WV16|GALT6_DROME N-acetylgalactosaminyltransferase 6 OS=Drosophila melanogaster GN=pgant6 PE=2 SV=2

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 29  DEDKIIPGLGENGRAGTLPGLTNDIITKIMKIE-AFNKVLSDHISYTRKIPDARFPECHE 87
           ++D    GLGE G+A TL   +   + K M +E  FN +LSD IS  R +PD R P C +
Sbjct: 135 EKDAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRK 194

Query: 88  LKYDEDLPTIG 98
            +Y   LPT+ 
Sbjct: 195 KEYVAKLPTVS 205

Glycopeptide transferase involved in O-linked oligosaccharide biosynthesis, which catalyzes the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide. In contrast to other proteins of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on the protein receptor, but instead requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified. Prefers the diglycosylated Muc5AC-3/13 as substrate.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q6WV20|GALT1_DROME Polypeptide N-acetylgalactosaminyltransferase 1 OS=Drosophila melanogaster GN=GalNAc-T1 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 10  DNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSD 69
           +N+++     + YE +I+ D  K   GLGE G A  L G   +   +I K  A N+ LS+
Sbjct: 63  ENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSE 122

Query: 70  HISYTRKIPDARFPECHELKYDED-LPT 96
            ++Y R + D R P C + ++D D LPT
Sbjct: 123 QLTYNRSVGDHRNPLCAKQRFDSDSLPT 150

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8IA44|GLT12_DROME Putative polypeptide N-acetylgalactosaminyltransferase 12 OS=Drosophila melanogaster GN=pgant12 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 35  PGLGENGRAGTL--PGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDE 92
           PGLGENG A  L  P    D  T+  +   +N  L++ I   R +PD R   C +L+YDE
Sbjct: 45  PGLGENGSASYLSVPSWEIDEYTQGWRYYLYNSWLAERIPLRRSLPDLRDHRCQKLEYDE 104

Query: 93  D 93
           D
Sbjct: 105 D 105

May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltransferase 1 OS=Sus scrofa GN=GALNT1 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 3   LVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEA 62
           L+YF    NK   +       G + E   K   G GE G+   +P    D + ++ KI  
Sbjct: 25  LLYFS-ECNKCDEKKERGLPAGDVLEPVQKPHEGPGEMGKPVVIPKEDQDKMKEMFKINQ 83

Query: 63  FNKVLSDHISYTRKIPDARFPECHELKYDEDLPT 96
           FN + S+ I+  R +PD R   C    Y ++LPT
Sbjct: 84  FNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPT 117

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|A8Y236|GLT10_CAEBR Putative polypeptide N-acetylgalactosaminyltransferase 10 OS=Caenorhabditis briggsae GN=gly-10 PE=3 SV=2

 Score = 43.9 bits (102), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 21  RYEGLIKEDEDKIIPGLGENGRAGTLPG--LTNDIITKIMKIEAFNKVLSDHISYTRKIP 78
           ++E  +  ++DK   G GE G+   LP    T      + K   +N  +SD IS  R I 
Sbjct: 88  KWEDEVAYEKDKAREGPGEWGKPVKLPDDKETEKEALSLYKANGYNAYISDMISLNRSIK 147

Query: 79  DARFPECHELKYDEDLPTI 97
           D R  EC ++ Y   LPT+
Sbjct: 148 DIRHKECKKMTYSAKLPTV 166

May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 OS=Rattus norvegicus GN=Galnt13 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 36  GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
           G GE G+A  +P    + + ++ KI  FN + SD I+  R +PD R   C    Y ++LP
Sbjct: 56  GPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELP 115

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 OS=Mus musculus GN=Galnt13 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 36  GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
           G GE G+A  +P    + + ++ KI  FN + SD I+  R +PD R   C    Y ++LP
Sbjct: 56  GPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELP 115

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. Probably responsible for the synthesis of Tn antigen in neuronal cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 36  GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
           G GE G+A  +P    + + ++ KI  FN + SD I+  R +PD R   C    Y ++LP
Sbjct: 56  GPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELP 115

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltransferase 1 OS=Rattus norvegicus GN=Galnt1 PE=1 SV=1

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 36  GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
           G GE G+   +P    + + ++ KI  FN + S+ I++ R +PD R   C    Y + LP
Sbjct: 57  GPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIAFNRSLPDVRLEGCKTKVYPDSLP 116

Query: 96  T 96
           T
Sbjct: 117 T 117

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9Y117|GALT3_DROME Polypeptide N-acetylgalactosaminyltransferase 3 OS=Drosophila melanogaster GN=pgant3 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 34  IPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDED 93
           I G G +GR   +P      + +  ++ +FN + SD I   R + D R PEC + KY   
Sbjct: 89  INGEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASG 148

Query: 94  LPT 96
           LP+
Sbjct: 149 LPS 151

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers EA2 as substrate. Has weak activity toward Muc5AC-3, -13 and -3/13 substrates.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
357624672	771	hypothetical protein KGM_04161 [Danaus p	0.541	0.110	0.423	4e-09
405977048	635	Polypeptide N-acetylgalactosaminyltransf	0.770	0.190	0.351	1e-08
307207692	598	Polypeptide N-acetylgalactosaminyltransf	0.490	0.128	0.428	4e-07
312384869	448	hypothetical protein AND_01448 [Anophele	0.445	0.156	0.428	6e-07
332027983	597	Polypeptide N-acetylgalactosaminyltransf	0.585	0.154	0.35	8e-07
270006170	613	hypothetical protein TcasGA2_TC008338 [T	0.439	0.112	0.391	2e-06
268370155	591	polypeptide GalNAc transferase 6-like [T	0.433	0.115	0.397	2e-06
307173963	597	Polypeptide N-acetylgalactosaminyltransf	0.484	0.127	0.407	3e-06
321476751	626	hypothetical protein DAPPUDRAFT_306553 [	0.547	0.137	0.395	3e-06
158300139	596	AGAP012414-PA [Anopheles gambiae str. PE	0.579	0.152	0.333	4e-06

>gi|357624672|gb|EHJ75362.1| hypothetical protein KGM_04161 [Danaus plexippus]

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 46/85 (54%)

Query: 12  KLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHI 71
           +  T D   +YE  I EDE +IIPGLGE G A  L G    +  +  K  A N  LSD I
Sbjct: 39  RAETYDSEDKYEKEILEDEARIIPGLGEGGVAAYLTGEAKRLGEESEKKLAINVYLSDRI 98

Query: 72  SYTRKIPDARFPECHELKYDEDLPT 96
           +Y R + D R P C  + YD +LP+
Sbjct: 99  AYNRTLKDYRNPACQRVIYDAELPS 123

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405977048|gb|EKC41520.1| Polypeptide N-acetylgalactosaminyltransferase 1 [Crassostrea gigas]

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 10/131 (7%)

Query: 5   YFKIPDNKLSTQD---LHARYEGLI--KEDEDKIIPGLGENGRAGTLPGLTNDIITKIMK 59
           YF    +K+S  D   LH R +  +  +E E K   GLGE GRA TL G    +   + K
Sbjct: 27  YFYYNFSKVSVNDEEILHLRNKRFMEYREKEGKR-EGLGEKGRAVTLQGEEKALADSLFK 85

Query: 60  IEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIM 119
            EAFN + SD I+  R IPD R   C E+KY ++LPT        +  W P+     R  
Sbjct: 86  KEAFNIIASDKIALDRSIPDVRDSRCREVKYPKELPTASVIIIFHNEAWSPL----LRTA 141

Query: 120 NNPTDPVPPDF 130
           ++  +  PP +
Sbjct: 142 HSVVNRSPPRY 152

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|307207692|gb|EFN85329.1| Polypeptide N-acetylgalactosaminyltransferase 1 [Harpegnathos saltator]

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 43/77 (55%)

Query: 21  RYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDA 80
           RYE  I + E  ++ GLGENG    L G        ++  +A N VLS+ IS TRK+PD 
Sbjct: 69  RYEQQILKLEYDVVVGLGENGEPAYLHGKEKVEGETVLAKKALNVVLSNKISLTRKLPDV 128

Query: 81  RFPECHELKYDEDLPTI 97
           R P C  L YD  LP++
Sbjct: 129 RNPLCANLTYDTLLPSV 145

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312384869|gb|EFR29495.1| hypothetical protein AND_01448 [Anopheles darlingi]

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 39/70 (55%)

Query: 22  YEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDAR 81
           YE LI+ D  K  PGLG+NG    L G   ++  K +   A N+ LS+H+SY R  PD R
Sbjct: 101 YEQLIRADLAKQRPGLGDNGEGVELTGDAKELGEKQLATIALNEELSEHLSYNRTPPDGR 160

Query: 82  FPECHELKYD 91
            P C   +YD
Sbjct: 161 HPACKRKQYD 170

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027983|gb|EGI68034.1| Polypeptide N-acetylgalactosaminyltransferase 1 [Acromyrmex echinatior]

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 5   YFKIPDNKLSTQDLHA--------RYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITK 56
           Y K  +N  + +D+          RYE  I + E  I+P LG NG    L G    +   
Sbjct: 44  YLKSSNNSQTQKDVDVAIQRLQKERYEQQISKFEHDIVPDLGNNGEPAYLYGREKILGEA 103

Query: 57  IMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPT 96
            +  +A N +LS+ IS TRK+PD R P C  + YD+ LP+
Sbjct: 104 ALAKKALNVILSNKISLTRKLPDVRNPLCANVTYDKLLPS 143

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270006170|gb|EFA02618.1| hypothetical protein TcasGA2_TC008338 [Tribolium castaneum]

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 36/69 (52%)

Query: 30  EDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELK 89
            D +  G GE G+   L    +D   K+ K+  FN  LSD I+  R +PD R P C   K
Sbjct: 89  RDSLRRGTGEQGKPAFLTAAESDNYEKLYKVNGFNAALSDQIAIDRAVPDIRHPGCKSKK 148

Query: 90  YDEDLPTIG 98
           Y +DLPT+ 
Sbjct: 149 YLKDLPTVS 157

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|268370155|ref|NP_001161257.1| polypeptide GalNAc transferase 6-like [Tribolium castaneum]

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)

Query: 30  EDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELK 89
            D +  G GE G+   L    +D   K+ K+  FN  LSD I+  R +PD R P C   K
Sbjct: 67  RDSLRRGTGEQGKPAFLTAAESDNYEKLYKVNGFNAALSDQIAIDRAVPDIRHPGCKSKK 126

Query: 90  YDEDLPTI 97
           Y +DLPT+
Sbjct: 127 YLKDLPTV 134

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173963|gb|EFN64693.1| Polypeptide N-acetylgalactosaminyltransferase 1 [Camponotus floridanus]

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query: 21  RYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDA 80
           +YE  I + E  ++PGLGENG+   L G         +K +A N +LS+ IS TRK+PD 
Sbjct: 69  KYEDKILKLEYNVVPGLGENGKPAYLYGKDKFQGEAALKKKALNVILSNKISLTRKLPDI 128

Query: 81  RFPECHELKYDEDLPT 96
           R   C  + YD+ LP+
Sbjct: 129 RNSLCMNITYDKLLPS 144

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321476751|gb|EFX87711.1| hypothetical protein DAPPUDRAFT_306553 [Daphnia pulex]

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 43/86 (50%)

Query: 26  IKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPEC 85
           I  D +KI  GLG  G+A  L G       +IMK EAFN  +S+ ISY R +PD R   C
Sbjct: 107 IAADLNKIENGLGAGGKAVKLFGAELQEAEEIMKKEAFNLFISNRISYNRTLPDVRDSMC 166

Query: 86  HELKYDEDLPTIGGFSWSGHYTWIPI 111
             L YD  LP+        +  W P+
Sbjct: 167 KGLTYDTILPSASVIIIFTNEAWSPL 192

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300139|ref|XP_320141.4| AGAP012414-PA [Anopheles gambiae str. PEST] gi|157013013|gb|EAA00190.4| AGAP012414-PA [Anopheles gambiae str. PEST]

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 5   YFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFN 64
           +F  P   +  + +      LI E+  +   G+GE+G+AG L    +++  K+ K   FN
Sbjct: 58  FFNNPSKNVHQKRIDWHNYDLIHEEAKR--SGIGEHGKAGQLDKSEHEMKDKLFKKNGFN 115

Query: 65  KVLSDHISYTRKIPDARFPECHELKYDEDLPTI 97
            VLSD IS  R +PD R   C + +Y  +LPT+
Sbjct: 116 AVLSDKISLNRSLPDIRHRGCRKKQYLSELPTV 148

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
FB|FBgn0034025	601	GalNAc-T1 "GalNAc-T1" [Drosoph	0.554	0.144	0.352	4.6e-12
FB|FBgn0035375	666	pgant6 "polypeptide GalNAc tra	0.445	0.105	0.397	1.8e-09
ZFIN|ZDB-GENE-090312-115	600	si:ch211-15e22.3 "si:ch211-15e	0.490	0.128	0.325	7.6e-05
UNIPROTKB|E1BRZ0	638	GALNTL2 "Uncharacterized prote	0.248	0.061	0.384	8.2e-05
UNIPROTKB|F1P3Z4	514	GALNT9 "Uncharacterized protei	0.388	0.118	0.419	8.3e-05
UNIPROTKB|F1PHS3	603	GALNT10 "Uncharacterized prote	0.420	0.109	0.342	0.00015
UNIPROTKB|Q86SR1	603	GALNT10 "Polypeptide N-acetylg	0.420	0.109	0.342	0.00015
UNIPROTKB|F1PSA3	578	GALNT12 "Uncharacterized prote	0.382	0.103	0.380	0.00021
ZFIN|ZDB-GENE-091204-444	556	galnt13 "UDP-N-acetyl-alpha-D-	0.579	0.163	0.311	0.00023
UNIPROTKB|F1RFR5	562	GALNT9 "Uncharacterized protei	0.388	0.108	0.403	0.00023

FB|FBgn0034025 GalNAc-T1 "GalNAc-T1" [Drosophila melanogaster (taxid:7227)]

 Score = 123 (48.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
 Identities = 31/88 (35%), Positives = 48/88 (54%)

Query:    10 DNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSD 69
             +N+++     + YE +I+ D  K   GLGE G A  L G   +   +I K  A N+ LS+
Sbjct:    63 ENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSE 122

Query:    70 HISYTRKIPDARFPECHELKYDED-LPT 96
              ++Y R + D R P C + ++D D LPT
Sbjct:   123 QLTYNRSVGDHRNPLCAKQRFDSDSLPT 150

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=ISS;IDA;NAS

GO:0005795 "Golgi stack" evidence=NAS

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

FB|FBgn0035375 pgant6 "polypeptide GalNAc transferase 6" [Drosophila melanogaster (taxid:7227)]

 Score = 130 (50.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 29/73 (39%), Positives = 43/73 (58%)

Query:    26 IKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIE-AFNKVLSDHISYTRKIPDARFPE 84
             +++D  ++  GLGE G+A TL   +   + K M +E  FN +LSD IS  R +PD R P 
Sbjct:   134 MEKDAKRV--GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPL 191

Query:    85 CHELKYDEDLPTI 97
             C + +Y   LPT+
Sbjct:   192 CRKKEYVAKLPTV 204

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=ISS;IDA;NAS

GO:0005795 "Golgi stack" evidence=NAS

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

ZFIN|ZDB-GENE-090312-115 si:ch211-15e22.3 "si:ch211-15e22.3" [Danio rerio (taxid:7955)]

 Score = 102 (41.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
 Identities = 27/83 (32%), Positives = 45/83 (54%)

Query:    13 LSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHIS 72
             L  +D H  YE  I++D  ++  G GE+G+    P + ++    + K   FN  +S++I+
Sbjct:    63 LRRRDWHD-YES-IRKDGQRV--GKGEHGKP--YPLVEDECDDSVYKENGFNIYVSNNIA 116

Query:    73 YTRKIPDARFPECHELKYDEDLP 95
               R +PD R P C +  Y E+LP
Sbjct:   117 LDRSLPDIRHPNCKQKLYLENLP 139

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BRZ0 GALNTL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 87 (35.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
 Identities = 15/39 (38%), Positives = 24/39 (61%)

Query:    58 MKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPT 96
             ++   FN+ LS+ I   R++P+ R P C + +YD  LPT
Sbjct:   155 LETHGFNEALSERIPLRRELPEVRHPLCLQQEYDSSLPT 193

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0030133 "transport vesicle" evidence=IEA

UNIPROTKB|F1P3Z4 GALNT9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 111 (44.1 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query:    36 GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
             GLG+ G A TL    ++  TK  +   +N  LSD IS  R IPD R  +C ++ Y +DLP
Sbjct:     4 GLGQGGMAATLRDDNHESETKYEEY-GYNAQLSDRISLDRSIPDYRPKKCKQMTYPDDLP 62

Query:    96 TI 97
              I
Sbjct:    63 QI 64

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|F1PHS3 GALNT10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 24/70 (34%), Positives = 35/70 (50%)

Query:    26 IKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPEC 85
             I+ D  ++  G GE GR    P    + + +  +   FN  +SD IS  R +PD R P C
Sbjct:    80 IRRDAQRV--GNGEQGRP--YPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNC 135

Query:    86 HELKYDEDLP 95
             +  +Y E LP
Sbjct:   136 NSKRYLETLP 145

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|Q86SR1 GALNT10 "Polypeptide N-acetylgalactosaminyltransferase 10" [Homo sapiens (taxid:9606)]

 Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 24/70 (34%), Positives = 35/70 (50%)

Query:    26 IKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPEC 85
             I+ D  ++  G GE GR    P    + + +  +   FN  +SD IS  R +PD R P C
Sbjct:    80 IRRDAQRV--GNGEQGRP--YPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNC 135

Query:    86 HELKYDEDLP 95
             +  +Y E LP
Sbjct:   136 NSKRYLETLP 145

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0016266 "O-glycan processing" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|F1PSA3 GALNT12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 83 (34.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
 Identities = 24/63 (38%), Positives = 33/63 (52%)

Query:    37 LGENGRAGTLP--GLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYD-ED 93
             LG  G A  L   G    +  + +++   N  LSD IS  R++P+   P C E KYD E+
Sbjct:    73 LGARGEAVRLQLQGEELRLQEESVRLHQINIYLSDRISLHRRLPERWNPLCKEKKYDYEN 132

Query:    94 LPT 96
             LPT
Sbjct:   133 LPT 135

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

ZFIN|ZDB-GENE-091204-444 galnt13 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13" [Danio rerio (taxid:7955)]

 Score = 109 (43.4 bits), Expect = 0.00023, P = 0.00023
 Identities = 29/93 (31%), Positives = 43/93 (46%)

Query:     3 LVYFKIPDNKLSTQDLHARYEGLIKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEA 62
             L+YF    NK   +  H+    L +    +     GE G+A  +P    D + ++ KI  
Sbjct:    25 LLYFS-ECNKCDNRKDHSLLPAL-RAVMSRAHEAPGEMGKAVVIPKEEQDKMKELFKINQ 82

Query:    63 FNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
             FN + SD I+  R +PD R   C    Y +DLP
Sbjct:    83 FNLMASDMIALNRSLPDVRLDGCKTKTYPDDLP 115

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RFR5 GALNT9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 109 (43.4 bits), Expect = 0.00023, P = 0.00023
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query:    36 GLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLP 95
             GLG+ G A TL   + +  +K  +   +N  LSD IS  R IPD R  +C ++ Y +DLP
Sbjct:    94 GLGQGGMAATLRDDSQETESKYEEY-GYNAQLSDRISLDRTIPDYRPKKCRQMTYSDDLP 152

Query:    96 TI 97
              I
Sbjct:   153 QI 154

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
KOG3737|consensus	603		100.0
KOG3736|consensus	578		99.95
KOG3738|consensus	559		99.88
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	93.55
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	92.99
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	92.63
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	91.86
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	89.48
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	88.69
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	88.64
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	88.04
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	86.18
PRK10073	328	putative glycosyl transferase; Provisional	85.51
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	84.77
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	84.76
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	83.43
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	82.85
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	81.06

>KOG3737|consensus

Probab=100.00  E-value=8.7e-38  Score=278.50  Aligned_cols=132  Identities=27%  Similarity=0.323  Sum_probs=119.7

Q ss_pred             CCCccchHHHHHH---------h-hccccccc-cccCCCCCCCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCC
Q psy5326           9 PDNKLSTQDLHAR---------Y-EGLIKEDE-DKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKI   77 (157)
Q Consensus         9 ~~~~~~~~~~~~~---------~-e~~i~~~~-~~~~~gpGE~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~Rsl   77 (157)
                      ++.++..|.|+-+         + .+++++++ ..+.+||||.|+|+.|+++.+...++..+++|||.++||.||++|++
T Consensus        58 ggd~~~~q~L~g~P~~~p~l~~G~LGNfEPKepe~P~~gPGE~gkp~~l~pe~k~a~~AsekEfGfN~~~SDmISm~R~v  137 (603)
T KOG3737|consen   58 GGDSMQRQYLTGKPQHDPVLRPGILGNFEPKEPEPPVGGPGEKGKPLVLGPEFKQAIQASEKEFGFNMVASDMISMDRNV  137 (603)
T ss_pred             CchhHhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCCCCcCCcccccChhHHHHHHHHHHhhCcceeehhhhhcccCc
Confidence            5666777777655         3 67888888 45679999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeeccc-CCCCC-----CCCCCCCCCCCCcce
Q psy5326          78 PDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMN-NPTDP-----VPPDFKNLEHPPIKC  140 (157)
Q Consensus        78 PD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~n-~p~~~-----~~dd~s~~~h~~~~~  140 (157)
                      +|+|..+|+.+.|+.+||++||||+||||.|||||||||||+. +|+.+     ++|||||+||||.|+
T Consensus       138 ~D~R~EECkhWdYpe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekL  206 (603)
T KOG3737|consen  138 NDLRQEECKHWDYPENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKL  206 (603)
T ss_pred             cccCHhhccccCCcccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHH
Confidence            9999999999999999999999999999999999999998885 57775     799999999999997

>KOG3736|consensus

Probab=99.95  E-value=2.7e-29  Score=231.07  Aligned_cols=121  Identities=28%  Similarity=0.382  Sum_probs=104.4

Q ss_pred             cCCCCCCCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccC-cccCCCCCCceEEEEecCCCCCcc
Q psy5326          33 IIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHE-LKYDEDLPTIGGFSWSGHYTWIPI  111 (157)
Q Consensus        33 ~~~gpGE~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~-~~Y~~~LPttSVII~FhNEAwStL  111 (157)
                      ...|+|..|+ +.+++.+.++.+.++++++||+++||+||++|++||+|++.|+. ..|.+.||++||||||||||||||
T Consensus        80 ~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~N~~~Sd~I~l~Rsl~D~r~~~C~~~~~~~~~Lp~~Svii~f~nE~~s~l  158 (578)
T KOG3736|consen   80 PGGGGGGGGK-VKLPEAEEDLEDEGYEKNAFNALLSDRISLNRSLPDLRHPECKKLKYYSDKLPTTSVIIIFHNEAWSTL  158 (578)
T ss_pred             cCCCccccCc-ccCCcchHHHHHHHhhcccchhhhhhcccccCCCcchhchhhhhccccccccCCCceEEEEecCCCcch
Confidence            4455666666 77778888899999999999999999999999999999999988 455588999999999999999999


Q ss_pred             ccceeecccCCCCC------CCCCCCCCCCCCcce-eEecCchHHHHhhh
Q psy5326         112 PDFDTRIMNNPTDP------VPPDFKNLEHPPIKC-ITFTPTPLEKILDT  154 (157)
Q Consensus       112 LRtv~sv~n~p~~~------~~dd~s~~~h~~~~~-~~~~~~~~~~~~~~  154 (157)
                      |||||||+|+.+.+      ++||+|+.+|++.++ .+..-.+++||+|+
T Consensus       159 lRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~~v~i~r~  208 (578)
T KOG3736|consen  159 LRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFSKVRILRT  208 (578)
T ss_pred             hheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhcceeEEee
Confidence            99999999975443      899999999999998 55556666887765

>KOG3738|consensus

Probab=99.88  E-value=9.9e-25  Score=195.09  Aligned_cols=107  Identities=25%  Similarity=0.362  Sum_probs=98.4

Q ss_pred             cCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeecccC-CC
Q psy5326          45 TLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PT  123 (157)
Q Consensus        45 ~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~  123 (157)
                      .+.+.....++..|+.|.||+..||.+..+|.+||+||++|....|..+||.|||||.|||||.|+|||||-||+|+ |.
T Consensus        74 y~~~~~~~~Ged~y~~~~fnq~esd~l~~~r~i~dtRh~qC~~~~y~~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~  153 (559)
T KOG3738|consen   74 YLNGGKWHQGEDPYKANSFNQEESDKLNPTRKIPDTRHPQCRDVDYKVDLPPTSVIITFHNEARSTLLRTVVSVLNRSPE  153 (559)
T ss_pred             hhcCCCccCCCchhhcCccchhhhhhhCCCCccccccccccccceeecCCCCceEEEEeccHHHHHHHHHHHHHHcCChH
Confidence            45566667889999999999999999999999999999999999999999999999999999999999999999996 55


Q ss_pred             CC-----CCCCCCCCCCCCcceeEecCchHHHHhhh
Q psy5326         124 DP-----VPPDFKNLEHPPIKCITFTPTPLEKILDT  154 (157)
Q Consensus       124 ~~-----~~dd~s~~~h~~~~~~~~~~~~~~~~~~~  154 (157)
                      ++     ++||||+ +  +++|-.|+-+|++|.||.
T Consensus       154 ~li~EiILVDD~S~-D--ped~~~L~ri~kvr~LRN  186 (559)
T KOG3738|consen  154 HLIHEIILVDDFSQ-D--PEDGKLLKRIPKVRVLRN  186 (559)
T ss_pred             HhhheeEEecCCCC-C--hHHHHHHhhhheeeeecc
Confidence            54     8999999 4  999999999999999875

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=93.55  E-value=0.017  Score=43.78  Aligned_cols=38  Identities=8%  Similarity=-0.087  Sum_probs=31.3

Q ss_pred             CCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      |++||||+.|||.+..|.+++.|+++.. +.   .++||+|.
T Consensus         1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~   42 (202)
T cd04184           1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDAST   42 (202)
T ss_pred             CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCC
Confidence            7899999999999888999999999853 22   37888874

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=92.99  E-value=0.023  Score=39.20  Aligned_cols=38  Identities=13%  Similarity=0.107  Sum_probs=31.4

Q ss_pred             CCCceEEEEecCCCCCccccceeecccCC--C-CC-CCCCCCC
Q psy5326          94 LPTIGGFSWSGHYTWIPIPDFDTRIMNNP--T-DP-VPPDFKN  132 (157)
Q Consensus        94 LPttSVII~FhNEAwStLLRtv~sv~n~p--~-~~-~~dd~s~  132 (157)
                      .|.+||||.-||++ ..|.+++.||++.-  . +. ++||+|.
T Consensus         2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~~eiivvddgs~   43 (291)
T COG0463           2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKDFEIIVVDDGST   43 (291)
T ss_pred             CccEEEEEeccchh-hhHHHHHHHHHhhhhcceEEEEEeCCCC
Confidence            68999999999999 88889999999842  2 33 7899875

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=92.63  E-value=0.024  Score=43.86  Aligned_cols=38  Identities=16%  Similarity=0.017  Sum_probs=30.5

Q ss_pred             CCceEEEEecCCCCCccccceeecccC--CC---C-CCCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNN--PT---D-PVPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~--p~---~-~~~dd~s~  132 (157)
                      |++||||..|||....|.+++.|+++.  |.   + +++||.|+
T Consensus         1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~   44 (234)
T cd06421           1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRR   44 (234)
T ss_pred             CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCc
Confidence            789999999999777777889999873  44   2 27899875

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=91.86  E-value=0.056  Score=47.15  Aligned_cols=41  Identities=15%  Similarity=0.148  Sum_probs=33.2

Q ss_pred             CCCCCCceEEEEecCCCCCccccceeecccC--CCC---CCCCCCCC
Q psy5326          91 DEDLPTIGGFSWSGHYTWIPIPDFDTRIMNN--PTD---PVPPDFKN  132 (157)
Q Consensus        91 ~~~LPttSVII~FhNEAwStLLRtv~sv~n~--p~~---~~~dd~s~  132 (157)
                      ++..|++||||+.|||+ ..|.|++.|+++.  |..   +++||.|.
T Consensus        36 ~~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~~~eIIVVDd~St   81 (384)
T TIGR03469        36 PEAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPGKLHVILVDDHST   81 (384)
T ss_pred             CCCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCCceEEEEEeCCCC
Confidence            36789999999999998 7788999999863  433   37899876

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=89.48  E-value=0.083  Score=41.11  Aligned_cols=37  Identities=11%  Similarity=-0.081  Sum_probs=30.6

Q ss_pred             CceEEEEecCCCCCccccceeecccC-CCCC-CCCCCCC
Q psy5326          96 TIGGFSWSGHYTWIPIPDFDTRIMNN-PTDP-VPPDFKN  132 (157)
Q Consensus        96 ttSVII~FhNEAwStLLRtv~sv~n~-p~~~-~~dd~s~  132 (157)
                      ++||||+-|||.+..|.+++.++.+. |.+. ++||.|+
T Consensus         1 ~isVvIp~~ne~~~~l~~~l~sl~~q~~~eiivvdd~s~   39 (235)
T cd06434           1 DVTVIIPVYDEDPDVFRECLRSILRQKPLEIIVVTDGDD   39 (235)
T ss_pred             CeEEEEeecCCChHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence            47999999999989999999988874 4443 7888876

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=88.69  E-value=0.17  Score=38.99  Aligned_cols=37  Identities=5%  Similarity=-0.087  Sum_probs=29.1

Q ss_pred             CCceEEEEecCCCCCccccceeecccC--CC-CC-CCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNN--PT-DP-VPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~--p~-~~-~~dd~s~  132 (157)
                      |.+||||..|||+-. |.+++.||++.  |. +. ++||.|.
T Consensus         1 p~vsviip~~n~~~~-l~~~L~sl~~q~~~~~eiivVdd~s~   41 (196)
T cd02520           1 PGVSILKPLCGVDPN-LYENLESFFQQDYPKYEILFCVQDED   41 (196)
T ss_pred             CCeEEEEecCCCCcc-HHHHHHHHHhccCCCeEEEEEeCCCc
Confidence            789999999999875 88999999874  22 22 6788776

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=88.64  E-value=0.15  Score=45.37  Aligned_cols=40  Identities=15%  Similarity=0.065  Sum_probs=33.0

Q ss_pred             CCCCCceEEEEecCCCCCccccceeecccC--CCC----CCCCCCCC
Q psy5326          92 EDLPTIGGFSWSGHYTWIPIPDFDTRIMNN--PTD----PVPPDFKN  132 (157)
Q Consensus        92 ~~LPttSVII~FhNEAwStLLRtv~sv~n~--p~~----~~~dd~s~  132 (157)
                      ..+|++||||.-|||+ .+|-+++.|+.+.  |.+    +++||.|.
T Consensus        46 ~~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~St   91 (439)
T TIGR03111        46 GKLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQST   91 (439)
T ss_pred             CCCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCC
Confidence            5689999999999998 8888999998863  554    27899875

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=88.04  E-value=0.11  Score=43.04  Aligned_cols=35  Identities=11%  Similarity=0.120  Sum_probs=29.2

Q ss_pred             eEEEEecCCCCCccccceeecccC-CC----CC-CCCCCCC
Q psy5326          98 GGFSWSGHYTWIPIPDFDTRIMNN-PT----DP-VPPDFKN  132 (157)
Q Consensus        98 SVII~FhNEAwStLLRtv~sv~n~-p~----~~-~~dd~s~  132 (157)
                      ||||+.|||+...|.+++.||++. +.    +. ++||.|.
T Consensus         1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~   41 (299)
T cd02510           1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSD   41 (299)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCC
Confidence            899999999889999999999963 32    22 8999985

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=86.18  E-value=0.18  Score=40.15  Aligned_cols=37  Identities=8%  Similarity=-0.015  Sum_probs=29.2

Q ss_pred             CCceEEEEecCCCCCccccceeecccC--CCC---C-CCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNN--PTD---P-VPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~--p~~---~-~~dd~s~  132 (157)
                      |.+||||..|||+ ..|-+++.||.+.  |.+   . ++||.|+
T Consensus         1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~   43 (241)
T cd06427           1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDD   43 (241)
T ss_pred             CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCC
Confidence            7899999999997 6788999999874  432   2 5788764

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PRK10073 putative glycosyl transferase; Provisional

Probab=85.51  E-value=0.25  Score=42.55  Aligned_cols=39  Identities=10%  Similarity=-0.013  Sum_probs=31.3

Q ss_pred             CCCCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        93 ~LPttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      ..|.+||||..||+. ..|-+++.||++.. .+   .++||+|.
T Consensus         4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~~EIIiVdDgSt   46 (328)
T PRK10073          4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTALEIIIVNDGST   46 (328)
T ss_pred             CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCCeEEEEEeCCCC
Confidence            468999999999997 77888999999752 23   27899986

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=84.77  E-value=0.28  Score=38.67  Aligned_cols=41  Identities=20%  Similarity=0.018  Sum_probs=31.8

Q ss_pred             CCCCCceEEEEecCCCCCccccceeecccC--CCC----CCCCCCCCC
Q psy5326          92 EDLPTIGGFSWSGHYTWIPIPDFDTRIMNN--PTD----PVPPDFKNL  133 (157)
Q Consensus        92 ~~LPttSVII~FhNEAwStLLRtv~sv~n~--p~~----~~~dd~s~~  133 (157)
                      +..|.+||||..|||. +.|.+++.|+...  |.+    +++||.|+-
T Consensus        26 ~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d   72 (251)
T cd06439          26 AYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTD   72 (251)
T ss_pred             CCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCc
Confidence            6789999999999997 7788888888763  332    267898873

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=84.76  E-value=0.26  Score=37.32  Aligned_cols=34  Identities=6%  Similarity=-0.082  Sum_probs=27.5

Q ss_pred             eEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          98 GGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        98 SVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      ||||+.|||+ ..|.+++.||++.. ++   +++||.|.
T Consensus         1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~~eiiVvddgS~   38 (214)
T cd04196           1 AVLMATYNGE-KYLREQLDSILAQTYKNDELIISDDGST   38 (214)
T ss_pred             CEEEEecCcH-HHHHHHHHHHHhCcCCCeEEEEEeCCCC
Confidence            7999999998 77889999999742 22   28999986

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=83.43  E-value=0.2  Score=35.55  Aligned_cols=34  Identities=6%  Similarity=-0.214  Sum_probs=26.0

Q ss_pred             eEEEEecCCCCCccccceeecccC---CCC-CCCCCCCC
Q psy5326          98 GGFSWSGHYTWIPIPDFDTRIMNN---PTD-PVPPDFKN  132 (157)
Q Consensus        98 SVII~FhNEAwStLLRtv~sv~n~---p~~-~~~dd~s~  132 (157)
                      ||||+.||+ ...|.|++.|+.+.   +.+ +++||+|+
T Consensus         1 Svvip~~n~-~~~l~~~l~sl~~q~~~~~eiivvdd~s~   38 (169)
T PF00535_consen    1 SVVIPTYNE-AEYLERTLESLLKQTDPDFEIIVVDDGST   38 (169)
T ss_dssp             EEEEEESS--TTTHHHHHHHHHHHSGCEEEEEEEECS-S
T ss_pred             CEEEEeeCC-HHHHHHHHHHHhhccCCCEEEEEeccccc
Confidence            899999999 88899999999986   122 28999883

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=82.85  E-value=0.4  Score=47.27  Aligned_cols=41  Identities=15%  Similarity=-0.028  Sum_probs=33.1

Q ss_pred             CCCCCceEEEEecCCCCCccccceeeccc--CCCC----CCCCCCCC
Q psy5326          92 EDLPTIGGFSWSGHYTWIPIPDFDTRIMN--NPTD----PVPPDFKN  132 (157)
Q Consensus        92 ~~LPttSVII~FhNEAwStLLRtv~sv~n--~p~~----~~~dd~s~  132 (157)
                      +..|++||||.-|||....+-+|+.++++  .|.+    +++||.|.
T Consensus       257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~  303 (852)
T PRK11498        257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGR  303 (852)
T ss_pred             CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCC
Confidence            46799999999999998877788887764  5754    48999874

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=81.06  E-value=0.39  Score=45.80  Aligned_cols=41  Identities=20%  Similarity=0.068  Sum_probs=33.0

Q ss_pred             CCCCCCceEEEEecCCCCCccccceeeccc--CCCC----CCCCCCC
Q psy5326          91 DEDLPTIGGFSWSGHYTWIPIPDFDTRIMN--NPTD----PVPPDFK  131 (157)
Q Consensus        91 ~~~LPttSVII~FhNEAwStLLRtv~sv~n--~p~~----~~~dd~s  131 (157)
                      ++.+|++||||.-|||+...+-+|+.++++  .|.+    +++||.|
T Consensus       127 ~~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgS  173 (713)
T TIGR03030       127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGG  173 (713)
T ss_pred             cccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcC
Confidence            467899999999999998877678887765  5754    3889986

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	157
2d7i_A	570	Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac		2e-04

>pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 26  IKEDEDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPEC 85
           I+ D  ++  G GE GR    P    + + +  +   FN  +SD IS  R +PD R P C
Sbjct: 47  IRRDAQRV--GNGEQGRP--YPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNC 102
Query: 86  HELKYDEDLP 95
           +  +Y E LP
Sbjct: 103 NSKRYLETLP 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	157
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	9e-13
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	8e-11
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	3e-06

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501

 Score = 63.6 bits (154), Expect = 9e-13
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 31 DKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKY 90
          D +     +  +   + G              FN+V SD +   R IPD R  +C   ++
Sbjct: 2  DALKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQW 61

Query: 91 DEDLPTI 97
            DLP  
Sbjct: 62 RVDLPAT 68

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570

 Score = 57.9 bits (139), Expect = 8e-11
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 30  EDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELK 89
            D    G GE GR   +     + + +  +   FN  +SD IS  R +PD R P C+  +
Sbjct: 49  RDAQRVGNGEQGRPYPMTDA--ERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKR 106

Query: 90  YDEDLPTI 97
           Y E LP  
Sbjct: 107 YLETLPNT 114

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 68 SDHISYTRKIPDARFPECHELKYDEDLPTI 97
          S+ I+  R +PD R   C    Y ++LPT 
Sbjct: 2  SEMIALNRSLPDVRLEGCKTKVYPDNLPTT 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.82
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.67
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.5
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	97.38
3bcv_A	240	Putative glycosyltransferase protein; protein stru	92.93
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	92.57
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	92.56
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	87.31
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	84.59
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	81.35

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=99.82  E-value=4e-22  Score=178.30  Aligned_cols=105  Identities=28%  Similarity=0.459  Sum_probs=93.0

Q ss_pred             ccccCCCCCCCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCC
Q psy5326          30 EDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWI  109 (157)
Q Consensus        30 ~~~~~~gpGE~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwS  109 (157)
                      .+..+.|+||+|+|+.|+++++  .++.|++++||+++||+|+++|++||+|++.|+...|++++|.+||||++|||+|+
T Consensus        49 ~~~~~~~~g~~g~~~~~~~~~~--~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~  126 (570)
T 2d7i_A           49 RDAQRVGNGEQGRPYPMTDAER--VDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWS  126 (570)
T ss_dssp             HHHTCCSTTGGGCCCCCCTTTT--SSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEESSCCCEEEEEEESSCCHH
T ss_pred             ccccCCCCCCCCCceECCHHHH--HHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccCCCCCCeEEEEEECCCCHH
Confidence            3456899999999999986544  47889999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeeccc-CCCC-----CCCCCCCCCCCC
Q psy5326         110 PIPDFDTRIMN-NPTD-----PVPPDFKNLEHP  136 (157)
Q Consensus       110 tLLRtv~sv~n-~p~~-----~~~dd~s~~~h~  136 (157)
                      .|.|+++||++ +++.     +++||+|.-+.+
T Consensus       127 ~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl  159 (570)
T 2d7i_A          127 SLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL  159 (570)
T ss_dssp             HHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG
T ss_pred             HHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH
Confidence            99999999997 3432     289999986653

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=99.67  E-value=2.1e-18  Score=150.28  Aligned_cols=97  Identities=19%  Similarity=0.258  Sum_probs=86.0

Q ss_pred             CCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeec
Q psy5326          39 ENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRI  118 (157)
Q Consensus        39 E~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv  118 (157)
                      .+|.+..+++++++..++++++++||+++||+|+++|++||+|++.|+...|+.++|.+||||++|||+++.|.|+++||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~~~~L~~~l~Sl   89 (501)
T 2ffu_A           10 DFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSV   89 (501)
T ss_dssp             GSCHHHHHHTTCCCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCCSSCCCEEEEEEESSCCHHHHHHHHHHH
T ss_pred             hCCcccccChhhhhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCCcCCCCEEEEEEeCcCcHHHHHHHHHHH
Confidence            44566667777888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC-CC----CC-CCCCCCCCCC
Q psy5326         119 MNN-PT----DP-VPPDFKNLEH  135 (157)
Q Consensus       119 ~n~-p~----~~-~~dd~s~~~h  135 (157)
                      ++. ++    ++ ++||+|.-+.
T Consensus        90 ~~q~~~~~~~EIIvVDDgS~D~t  112 (501)
T 2ffu_A           90 LKKSPPHLIKEIILVDDYSNDPE  112 (501)
T ss_dssp             HHHSCGGGEEEEEEEECSCSCTH
T ss_pred             HhhCchhhceeEEEEECCCCchH
Confidence            974 43    22 8999997654

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=99.50  E-value=5.5e-16  Score=133.34  Aligned_cols=71  Identities=21%  Similarity=0.367  Sum_probs=56.8

Q ss_pred             hhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeecccC-CCC-----CCCCCCCCCCCCC
Q psy5326          67 LSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PTD-----PVPPDFKNLEHPP  137 (157)
Q Consensus        67 lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~~-----~~~dd~s~~~h~~  137 (157)
                      +||+||++|+|||+|++.|+.+.|+.++|.+||||++|||+|++|.|+++||++. ++.     +++||+|.-+++.
T Consensus         1 ~s~~~~~~r~~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~   77 (472)
T 1xhb_A            1 ASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK   77 (472)
T ss_dssp             -------CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT
T ss_pred             CCccccCCCCCCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHH
Confidence            6999999999999999999999999999999999999999999999999999974 332     2899999865443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=97.38  E-value=3.5e-05  Score=68.14  Aligned_cols=88  Identities=9%  Similarity=-0.090  Sum_probs=64.4

Q ss_pred             ccCCCcchhHHHhhhhhcc----chhhhhc------ccCCCCCCCCCCCccccC------------cccCCCCCCceEEE
Q psy5326          44 GTLPGLTNDIITKIMKIEA----FNKVLSD------HISYTRKIPDARFPECHE------------LKYDEDLPTIGGFS  101 (157)
Q Consensus        44 v~L~~~e~~~~e~~~~~~~----FN~~lSD------rIsL~RslPD~R~~~Ck~------------~~Y~~~LPttSVII  101 (157)
                      ..|+++++.+..+.+++++    .|+.+++      +.+++|..+......|.-            ...+..+|.+||||
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~vsviI   99 (625)
T 2z86_A           20 ISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVI   99 (625)
T ss_dssp             SCCCHHHHHHHHHHHHHHTCCCCEECCCCCCCSSCTTCCTTCCCCCCCSSTTCHHHHHTCCCC-------CCCCCEEEEE
T ss_pred             ccccchhHHHHHHHHHHHhhhccccccccccCCCCCCCcccCCCCCCCCCccccchhhhcccccCCCcccccCCcEEEEE
Confidence            3578888888788787777    7888777      778888877766655531            11236789999999


Q ss_pred             EecCCCCCccccceeecccCC--CC---CCCCCCCC
Q psy5326         102 WSGHYTWIPIPDFDTRIMNNP--TD---PVPPDFKN  132 (157)
Q Consensus       102 ~FhNEAwStLLRtv~sv~n~p--~~---~~~dd~s~  132 (157)
                      +.|||+ ..|.+++.|+.+..  ..   +++||+|.
T Consensus       100 p~~n~~-~~l~~~l~sl~~q~~~~~~eiivvDd~s~  134 (625)
T 2z86_A          100 PTYNRA-KILAITLACLCNQKTIYDYEVIVADDGSK  134 (625)
T ss_dssp             EESSCH-HHHHHHHHHHHTCCCSSCEEEEEEEESCS
T ss_pred             ecCCcH-HHHHHHHHHHHhhccCCCeEEEEEeCCCc
Confidence            999995 78889999998752  22   27888875

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=92.93  E-value=0.027  Score=42.50  Aligned_cols=39  Identities=8%  Similarity=-0.018  Sum_probs=31.5

Q ss_pred             CCCCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        93 ~LPttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      ..|.+||||+.||++ ..|-+++.||++.. +.   +++||+|.
T Consensus         3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~~eiIvvDd~S~   45 (240)
T 3bcv_A            3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSDIEIILIDDESP   45 (240)
T ss_dssp             CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSSEEEEEEECCCS
T ss_pred             CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCCeEEEEEECCCC
Confidence            579999999999996 78889999998742 22   27899875

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=92.57  E-value=0.032  Score=42.59  Aligned_cols=37  Identities=16%  Similarity=0.100  Sum_probs=30.0

Q ss_pred             CCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      |.+||||+.||++ ..|.+++.||++.- +.   +++||+|.
T Consensus         1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~~eiivvDd~S~   41 (255)
T 1qg8_A            1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDFELFIMDDNSN   41 (255)
T ss_dssp             CCEEEEEEESSCT-TTHHHHHHHHHTCSCCCEEEEEEECSCC
T ss_pred             CeEEEEEEcCCCH-HHHHHHHHHHHhccCCceEEEEEECCCC
Confidence            7899999999997 88889999998742 23   27899875

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=92.56  E-value=0.006  Score=52.49  Aligned_cols=97  Identities=11%  Similarity=-0.030  Sum_probs=40.5

Q ss_pred             cccCCCCCCCCccccCCCcch--hHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCC
Q psy5326          31 DKIIPGLGENGRAGTLPGLTN--DIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTW  108 (157)
Q Consensus        31 ~~~~~gpGE~G~~v~L~~~e~--~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAw  108 (157)
                      ....-++|+.++++..-..+.  ...+.......++.|++.+....+..+-.+...+..    ...|.+||||..|||+ 
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~----~~~p~vSVVIP~yNe~-  106 (387)
T 3f1y_A           32 DSPDLGTDDDDKAMADIGSEFMSTYHERPLGPASAAEWFRQRSYDYGQFPPEDLARRKR----ELGLTVSAVLPSRNVA-  106 (387)
T ss_dssp             ------------------------------CCSSHHHHHHHHEEEGGGSCHHHHHHHHH----HHTCCEEEEEEESSCT-
T ss_pred             CCccCCCCchhHHHHhhhhhhccccccccCCHHHHHHHHHhcCCcccCCCHHHHHhhhh----cCCCeEEEEEEcCCCH-
Confidence            334566778888776432221  122333345566677664333222222111111111    2368999999999996 


Q ss_pred             Cccccceeeccc----CCCC---CCCCCCCC
Q psy5326         109 IPIPDFDTRIMN----NPTD---PVPPDFKN  132 (157)
Q Consensus       109 StLLRtv~sv~n----~p~~---~~~dd~s~  132 (157)
                      .+|-+++.||.+    .+..   +++||+|.
T Consensus       107 ~~l~~~l~sl~~~l~~~~~~~EIIVVDDgSt  137 (387)
T 3f1y_A          107 DTVGGIIDEIHALNERAPLIDQILVVDADSE  137 (387)
T ss_dssp             TTHHHHHHHHHHHHHHSCCCSEEEEEECSCS
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEcCcCC
Confidence            677777777764    3433   28999985

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=87.31  E-value=0.16  Score=41.59  Aligned_cols=39  Identities=13%  Similarity=-0.229  Sum_probs=31.0

Q ss_pred             CCCCceEEEEecCCCCCccccceeecccC--CC--C-CCCCCCCC
Q psy5326          93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNN--PT--D-PVPPDFKN  132 (157)
Q Consensus        93 ~LPttSVII~FhNEAwStLLRtv~sv~n~--p~--~-~~~dd~s~  132 (157)
                      ..|.+||||..|||+ ..|-+++.||++.  +.  + +++||+|.
T Consensus        46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~~~eiivVDdgS~   89 (329)
T 3ckj_A           46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGLVDELIVLDSGST   89 (329)
T ss_dssp             TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTTBSEEEEEECSCC
T ss_pred             cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCCCcEEEEEeCCCC
Confidence            468999999999987 6788888899874  32  2 28999985

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=84.59  E-value=0.19  Score=45.69  Aligned_cols=38  Identities=8%  Similarity=-0.127  Sum_probs=0.0

Q ss_pred             CCCceEEEEecCCCCCccccceeecccCC-C--C-CCCCCCCC
Q psy5326          94 LPTIGGFSWSGHYTWIPIPDFDTRIMNNP-T--D-PVPPDFKN  132 (157)
Q Consensus        94 LPttSVII~FhNEAwStLLRtv~sv~n~p-~--~-~~~dd~s~  132 (157)
                      ||.+||||..||++ ..|-+++.||++.. +  + +++||+|.
T Consensus         1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~~EIIVVDDgSt   42 (729)
T 3l7i_A            1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQDFNLIIVNDGST   42 (729)
T ss_dssp             -------------------------------------------
T ss_pred             CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCCeEEEEEECCCC
Confidence            68999999999996 78888999999852 2  2 38999984

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=81.35  E-value=0.56  Score=41.19  Aligned_cols=40  Identities=15%  Similarity=0.050  Sum_probs=31.6

Q ss_pred             CCCCCceEEEEecCCCCCccccceeecccC-CCC---CCCCCCCC
Q psy5326          92 EDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PTD---PVPPDFKN  132 (157)
Q Consensus        92 ~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~~---~~~dd~s~  132 (157)
                      ...|.+||||+-||++ ..|.+++.||++. -++   +++||+|.
T Consensus       372 ~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~~eiivvdd~S~  415 (625)
T 2z86_A          372 KRVPLVSIYIPAYNCS-KYIVRCVESALNQTITDLEVCICDDGST  415 (625)
T ss_dssp             CSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCSEEEEEEEESCS
T ss_pred             ccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCCeEEEEEECcCC
Confidence            4578999999999994 7888899999874 222   27899875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	157
d1xhba2	328	c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa	0.001

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (81), Expect = 0.001
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 75 RKIPDARFPECHELKYDEDLPTI 97
          R +PD R   C    Y ++LPT 
Sbjct: 2  RSLPDVRLEGCKTKVYPDNLPTT 24

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	157
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.48
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	91.03
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	89.73

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=1.7e-15  Score=121.68  Aligned_cols=63  Identities=21%  Similarity=0.376  Sum_probs=56.3

Q ss_pred             CCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeecccC-CCC-----CCCCCCCCCCCC
Q psy5326          74 TRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PTD-----PVPPDFKNLEHP  136 (157)
Q Consensus        74 ~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~~-----~~~dd~s~~~h~  136 (157)
                      +|++||.|++.|+.+.|++++|++||||++|||++++|.|++.||++. |+.     .++||+|.-+..
T Consensus         1 ~~~~~~~r~~~~~~~~~~~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~   69 (328)
T d1xhba2           1 NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFL   69 (328)
T ss_dssp             CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGG
T ss_pred             CCCCCCCCChhhhhccCCCCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhH
Confidence            699999999999999999999999999999999999999999999974 443     279999976544

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.03  E-value=0.028  Score=41.27  Aligned_cols=37  Identities=16%  Similarity=0.100  Sum_probs=30.0

Q ss_pred             CCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326          95 PTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN  132 (157)
Q Consensus        95 PttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~  132 (157)
                      |.+||||+-||+. ..|.|++.||++.. +.   +++||+|.
T Consensus         1 P~vSiiip~yN~~-~~l~~~l~Si~~Qt~~~~eiivvdd~S~   41 (255)
T d1qg8a_           1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDFELFIMDDNSN   41 (255)
T ss_dssp             CCEEEEEEESSCT-TTHHHHHHHHHTCSCCCEEEEEEECSCC
T ss_pred             CEEEEEEecCCCH-HHHHHHHHHHHhCCCCCeEEEEEECCCC
Confidence            8999999999995 67889999999853 22   28899875

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=89.73  E-value=0.017  Score=48.33  Aligned_cols=35  Identities=6%  Similarity=-0.342  Sum_probs=26.6

Q ss_pred             eEEEEecCCCCCccccceeecccCCCCC---CCCCCCC
Q psy5326          98 GGFSWSGHYTWIPIPDFDTRIMNNPTDP---VPPDFKN  132 (157)
Q Consensus        98 SVII~FhNEAwStLLRtv~sv~n~p~~~---~~dd~s~  132 (157)
                      =|||+||||+.++++|++..+...|.-.   ++||.|+
T Consensus         2 lVVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSd   39 (381)
T d2bo4a1           2 LVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERD   39 (381)
T ss_dssp             EEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCC
T ss_pred             EEEEEcCCCcHHHHHHHHHHHHhCCCeeEEEEEcCCCC
Confidence            3899999999999999996555556432   6777776