Psyllid ID: psy5478

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------101
MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTS
cEEEEEccccEEEEEEEcccccccccEEEcccccEEEEEEEEEcccccccccccccccccccccccEEEEEEEEEEccccccccccEEEEEEEEEcccccEEEEccEEEcccccEEEcccccccEEEEEEEEcccccccccEEEEEEccEEEEEEEEEcccccccEEEEEEEEEccccccEEEEEccccccccccccccEEcccccccccEEEEEEEEEEEcccccEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccEEEEEcccccccccccccccccEEEEEccccccccEEEcccHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEccccccEEEEEccccccEEEEEcccccccccEEcccccccEEEEEEEEcccccccccccccccccccccccEEEEEEEEEEcccccccccEEEEEEEEEEcccccEEEEccccccccccEEEEccccccEEEEEEEEcccccccccEEEEEcccEEEEEEEEEcccccccEEEEEEEEEccccccEEEEEccccccccccccccEEcccccccccEEEEEEEEEEEcccccEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEccccEEcccccccccccEEEEEccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccEEEccc
cEEEEEccccccEEEEEEccccccccEEEcccccccEEEEEEEccccccccccccccccccccccEEEEEEEEEEEcccEEEEEccEEEEEEEEEcccccEEEccccEccccccEEEccccccccEEEEEEEcccccccccEEEEEEccEEEEEEEEccccccEEEEEEEEEEEcccccEEEEEccccccccHHHccccccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHccccccccEEEEEccccEEEccccccccccEEEEEcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccEEEEEEccccccccEEEcccccccEEEEEEEccccccccccccEEEcccccccEEEEEEEEEEEccHHEEHHHcHEEEEEEEHHHcccEEcccccEccccccEEEEccccccccEEEEEcccccccccEEEEEEcccEEEEEEEEccccccEEEEEEEEEEEcccccEEEEEccccccccHHHccccccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccEEEEEEEccccHHHccccccEEEEEEcccccccccccccccccEEEEEccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccHccccEEEEccccccccEEEEcc
mrvniefdrpfygmifskgyysdshcvhlkpgtghlSATFEIFLNscgmsssanhavggvttpsgsyventiiiqydpyVQEVWDQARKLRCTWYDFYEKavtfrpfqvDMLHAVTANFLGDNLQCWMQIqvgkgpwaseVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCvahdgkrapiqlvdqhgcvvrpkIMSKFQkiknfgpsasvVSFAYfqafkfpdsmnvHFQCVIQVcryncpeprcggdygapqlgggfgsgeygpppppphvnsigseygvpdfggpgypeinprhpsgpagayseqkpevvpapaasvsnspnpsspapqksspssisdnevhmpppplpghgatyqtvkrkgtvseeggdlvtlggrprsveifpdelrgarrRRDTILHVYKREAqemtdvntsrtiqvvapgdvnfalnagatsneTVVVSQKsidsehiciSLPSFVAGLAMLLAVLVVACLVAAFLFVRVRsldakgmpttymhggfdpaefvkvtryysdshcvhlkpgtghlSATFEIFLNscgmsssanhavggvttpsgsyventiiiqydpyVQEVWDQARKLRCTWYDFYEKavtfrpfqvDMLHAVTANFLGDNLQCWMQIqvgkgpwaseVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCvahdgkrapiqlvdqhgcvvrpkIMSKFQkiknfgpsasvVSFAYfqafkfpdsmnvHFQCVIQVcryncpeprcggdygapqlgggfgsgeygpppppphvnsigseygvpdfggpgypeinprhpsgpagayseqkpevvpapaasvsnspnpsspapqksspssisdnevhmpppplpghgatyqtvkrkgtvseeggdlvtlggrprsveifpdelrgarrRRDTILHVYKREAqemtdvntsrtiqvvapgdvnfalnagatsneTVVVSQKsidsehiciSLPSFVAGLAMLLAVLVVACLVAAFLFVRVRsldakgmpttymhggfdpaefvkvts
mrvniefdrpfYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAhdgkrapiqlvdqHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTvseeggdlvtlggrprsveifpdelrgarrrrdTILHVYkreaqemtdvntsrTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAhdgkrapiqlvdqHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTvseeggdlvtlggrprsveifpdelrgarrrrdTILHVYkreaqemtdvntsrTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMpttymhggfdpaeFVKVTS
MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLgggfgsgeygppppppHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVpapaasvsnspnpsspapqksspssisDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSfvaglamllavlvvaclvaaflfvRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLgggfgsgeygppppppHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVpapaasvsnspnpsspapqksspssisDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSfvaglamllavlvvaclvaaflfvRVRSLDAKGMPTTYMHGGFDPAEFVKVTS
****IEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGA*************************************************************************************************************************************IF*********RRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGA*************************************************************************************************************************************IF*********RRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDP********
MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQ*********VSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCP************************************************************************************************************************************************************************************VVAPGDV**************************CISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKG*P**YMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQV******SEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPE********************************************************************************************************************************************************************************TIQVVAPGDVNFA***********************CISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRS*************GFDPA*FVKV**
MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHP********************************************EVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHP********************************************EVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTS
MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPR******************************************P**PEI***************************************************HMPPPPL*GHG****************************************RRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRC***************************************************************************************************MPPPPL*********************************************RRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVT*
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MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTRYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRYNCPEPRCGGDYGAPQLGGGFGSGEYGPPPPPPHVNSIGSEYGVPDFGGPGYPEINPRHPSGPAGAYSEQKPEVVPAPAASVSNSPNPSSPAPQKSSPSSISDNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRDTILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICISLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVKVTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1009 2.2.26 [Sep-21-2011]
Q03755424 Cuticlin-1 OS=Caenorhabdi no N/A 0.233 0.556 0.233 3e-06
>sp|Q03755|CUT1_CAEEL Cuticlin-1 OS=Caenorhabditis elegans GN=cut-1 PE=2 SV=2 Back     alignment and function desciption
 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 30/266 (11%)

Query: 1   MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGV 60
           + VN     PF G ++ KG Y  + C       G   A  E+  +SC      N A    
Sbjct: 38  ITVNFNTRNPFEGHVYVKGLYDQAGC--RSDEGGRQVAGIELPFDSC------NTARTRS 89

Query: 61  TTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFL 120
             P G +V  T++I + P      D+A +++C +Y   +K V+ +    D+  A     +
Sbjct: 90  LNPKGVFVSTTVVISFHPQFVTKVDRAYRIQC-FYMESDKTVSTQIEVSDLTTAFQTQVV 148

Query: 121 GDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDD-ENKFDMLVRNCVAHDGKRA 179
              + C  +I  G GP    +     IGQ +        +  + F  +V +C   DG   
Sbjct: 149 PMPV-CKYEILDG-GPSGQPIQ-FATIGQQVYHKWTCDSETTDTFCAVVHSCTVDDGNGD 205

Query: 180 PIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRY 239
            +Q++++ GC      + KF  + N      +++      +K+ D   + +QC I +   
Sbjct: 206 TVQILNEEGCA-----LDKF-LLNNLEYPTDLMAGQEAHVYKYADRSQLFYQCQISITIK 259

Query: 240 N----CPEPRCGGDYGAPQLGGGFGS 261
           +    C  P C      PQ   GFG+
Sbjct: 260 DPGSECARPTC----SEPQ---GFGA 278
Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment.
Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1009
242017672581 conserved hypothetical protein [Pediculu 0.490 0.851 0.747 0.0
270015577611 hypothetical protein TcasGA2_TC001440 [T 0.494 0.816 0.757 0.0
189241983 1325 PREDICTED: similar to dusky-like CG15013 0.490 0.373 0.755 0.0
307200180633 Cuticlin-1 [Harpegnathos saltator] 0.474 0.756 0.729 0.0
340719237631 PREDICTED: hypothetical protein LOC10065 0.498 0.797 0.720 0.0
307182550548 Cuticlin-1 [Camponotus floridanus] 0.490 0.903 0.719 0.0
170034753611 conserved hypothetical protein [Culex qu 0.492 0.813 0.718 0.0
158291400637 AGAP003211-PA [Anopheles gambiae str. PE 0.475 0.753 0.739 0.0
350408805632 PREDICTED: hypothetical protein LOC10074 0.498 0.795 0.717 0.0
157112425585 hypothetical protein AaeL_AAEL006122 [Ae 0.493 0.851 0.719 0.0
>gi|242017672|ref|XP_002429311.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514214|gb|EEB16573.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/534 (74%), Positives = 439/534 (82%), Gaps = 39/534 (7%)

Query: 1   MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVG-G 59
           MRVNIEFDRPFYGMIFSKG+YSD HCVHLKPGTGHLSATFEIFLNSCGMSSSANH  G G
Sbjct: 61  MRVNIEFDRPFYGMIFSKGFYSDPHCVHLKPGTGHLSATFEIFLNSCGMSSSANHIAGYG 120

Query: 60  VTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANF 119
             TPSGSYVENTII+QYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANF
Sbjct: 121 GPTPSGSYVENTIIVQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANF 180

Query: 120 LGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRA 179
           LGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRA
Sbjct: 181 LGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKRA 240

Query: 180 PIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRY 239
           PIQLVDQ+GCVVRPKIMS+FQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRY
Sbjct: 241 PIQLVDQYGCVVRPKIMSRFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRY 300

Query: 240 NCPEPRCGGDYGAPQ----LGGGFGSGEYGPPPPPPH--VNSIGSEYGVP---DFGGPGY 290
           NCPEP+CGG   +      L GG  +G  G      H   NS+ +EYG P   DF GP +
Sbjct: 301 NCPEPKCGGGGLSGDYGVPLLGGSATGISG------HDLANSLHAEYGPPLHADFAGPAF 354

Query: 291 PEINPRHPSGPAGAYSEQKPEVVPAPAASVSNS----PNPSSPAPQKSSPSSISDNEVHM 346
           P+  PRHPSGP+GAYSE KP+++PAP A   +S     +P+SP PQ       S+NEVH+
Sbjct: 355 PD--PRHPSGPSGAYSEPKPDIIPAPQAQQLSSSTVISSPTSPTPQALK----SNNEVHL 408

Query: 347 PPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDELRGARRRRD------- 399
           PPPPLPG  A+Y TVKRKGT SE  G+L TLGGRPRSV+  P +L+G R+RR+       
Sbjct: 409 PPPPLPGQFASYTTVKRKGTASENEGNLATLGGRPRSVD--PIDLQGIRKRRNAEVNEPI 466

Query: 400 --TILHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVVSQKSIDSEHICI 457
              +  VYKREAQEMTDVNTSR IQVVAPGDVNFALN+  +SNETVV+ Q + D E+IC+
Sbjct: 467 NIVMTRVYKREAQEMTDVNTSRIIQVVAPGDVNFALNS-PSSNETVVI-QSTNDPENICM 524

Query: 458 SLPSFVAGLAMLLAVLVVACLVAAFLFVRVRSLDAKGMPTTYMHGGFDPAEFVK 511
           S+PSFV GL MLL VLVV+CLVAAFLFVRVRS D KG+ T ++H G+D AEFVK
Sbjct: 525 SVPSFVGGLVMLLLVLVVSCLVAAFLFVRVRSFDQKGIVTAFVHPGYDNAEFVK 578

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270015577|gb|EFA12025.1| hypothetical protein TcasGA2_TC001440 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189241983|ref|XP_968018.2| PREDICTED: similar to dusky-like CG15013-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307200180|gb|EFN80478.1| Cuticlin-1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340719237|ref|XP_003398062.1| PREDICTED: hypothetical protein LOC100650045 [Bombus terrestris] Back     alignment and taxonomy information
>gi|307182550|gb|EFN69743.1| Cuticlin-1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|170034753|ref|XP_001845237.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167876367|gb|EDS39750.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|158291400|ref|XP_312919.4| AGAP003211-PA [Anopheles gambiae str. PEST] gi|157017757|gb|EAA08385.5| AGAP003211-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|350408805|ref|XP_003488521.1| PREDICTED: hypothetical protein LOC100742711 [Bombus impatiens] Back     alignment and taxonomy information
>gi|157112425|ref|XP_001657529.1| hypothetical protein AaeL_AAEL006122 [Aedes aegypti] gi|108878090|gb|EAT42315.1| AAEL006122-PA, partial [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1009
FB|FBgn0066365611 dyl "dusky-like" [Drosophila m 0.475 0.785 0.670 1.4e-176
FB|FBgn0004511699 dy "dusky" [Drosophila melanog 0.245 0.354 0.696 3.6e-101
FB|FBgn0002577682 m "miniature" [Drosophila mela 0.228 0.338 0.439 2.3e-57
FB|FBgn0035543604 CG15020 [Drosophila melanogast 0.236 0.395 0.330 1.8e-31
FB|FBgn0036985 2284 zye "zye" [Drosophila melanoga 0.234 0.103 0.318 3.8e-28
WB|WBGene00013180403 cutl-10 [Caenorhabditis elegan 0.225 0.565 0.286 8.6e-14
WB|WBGene00009979399 cutl-1 [Caenorhabditis elegans 0.229 0.581 0.301 3.9e-13
WB|WBGene00021396601 cutl-24 [Caenorhabditis elegan 0.105 0.176 0.339 4.2e-13
WB|WBGene00009961585 cutl-7 [Caenorhabditis elegans 0.229 0.396 0.219 2.8e-08
FB|FBgn0039851774 mey "morpheyus" [Drosophila me 0.174 0.227 0.285 4.3e-08
FB|FBgn0066365 dyl "dusky-like" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1715 (608.8 bits), Expect = 1.4e-176, P = 1.4e-176
 Identities = 360/537 (67%), Positives = 387/537 (72%)

Query:     1 MRVNIEFDRPFYGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANH-AVG- 58
             MRVNIEFDRPFYGMIFSKG+YSD HCVHLKPGTGHLSATFEIFLNSCGM+SSANH A G 
Sbjct:    96 MRVNIEFDRPFYGMIFSKGFYSDPHCVHLKPGTGHLSATFEIFLNSCGMTSSANHNAAGY 155

Query:    59 GVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTAN 118
             G  TPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTAN
Sbjct:   156 GAPTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTAN 215

Query:   119 FLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKR 178
             FLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKR
Sbjct:   216 FLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDMLVRNCVAHDGKR 275

Query:   179 APIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCR 238
             APIQLVDQ+GCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCR
Sbjct:   276 APIQLVDQNGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCR 335

Query:   239 YNCPEPRCG-----GDYGAPQLXXXXXXXXXXXXXXXXHVNSIGSEYGVP------DF-- 285
             YNCPEP+CG     G+YG PQ+                  N +  EYG P      DF  
Sbjct:   336 YNCPEPKCGPGLPGGEYGLPQIGA----------------NGLSEEYGPPEAYERNDFAL 379

Query:   286 GGPG------YPEINPRHPSGPA-GAYSEQKPEVVXXXXXXXXXXXXXXXXXXXXXXXXX 338
             GGPG      YP+  PRHP+  A GAYSE +P+VV                         
Sbjct:   380 GGPGVLPPAAYPD--PRHPASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASS 437

Query:   339 XX-------DNEVHMPPPPLPGHGATYQTVKRKGTVSEEGGDLVTLGGRPRSVEIFPDEL 391
                       NE+ +PPPPLPG    Y TVKRK  +S  GG+LV+LGGRPRSVE   D+L
Sbjct:   438 QSPQPQPTGSNELGLPPPPLPGQSGQYSTVKRKDDLSA-GGNLVSLGGRPRSVEGL-DDL 495

Query:   392 RGARRRRDTI------LHVYKREAQEMTDVNTSRTIQVVAPGDVNFALNAGATSNETVVV 445
             RG RRRRDT+        +YKR AQEMTDVNTSR IQVVAPGDVNFALN+ A SNETVV+
Sbjct:   496 RGVRRRRDTMDIVVKPQRIYKRNAQEMTDVNTSRIIQVVAPGDVNFALNSNA-SNETVVI 554

Query:   446 -SQKSIDSEHICISLPSXXXXXXXXXXXXXXXXXXXXXXXXRVRSLDAKGMPTTYMH 501
              S +S D+E IC+S+PS                        RVR  D KG    Y++
Sbjct:   555 QSARSADAETICMSVPSFVGGLVMLLLVLAVASLVAAFLFVRVRHFDRKGAGMAYVN 611
GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS
GO:0007160 "cell-matrix adhesion" evidence=IMP
GO:0016476 "regulation of embryonic cell shape" evidence=IMP
GO:0003383 "apical constriction" evidence=IMP
GO:0016324 "apical plasma membrane" evidence=IDA
GO:0007015 "actin filament organization" evidence=IMP
FB|FBgn0004511 dy "dusky" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0002577 m "miniature" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0035543 CG15020 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0036985 zye "zye" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00013180 cutl-10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00009979 cutl-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00021396 cutl-24 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00009961 cutl-7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0039851 mey "morpheyus" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1009
pfam00100252 pfam00100, Zona_pellucida, Zona pellucida-like dom 3e-30
pfam00100252 pfam00100, Zona_pellucida, Zona pellucida-like dom 7e-27
smart00241252 smart00241, ZP, Zona pellucida (ZP) domain 2e-14
smart00241252 smart00241, ZP, Zona pellucida (ZP) domain 9e-12
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 0.002
PHA03247 3151 PHA03247, PHA03247, large tegument protein UL36; P 0.002
PRK05641153 PRK05641, PRK05641, putative acetyl-CoA carboxylas 0.003
PRK05641153 PRK05641, PRK05641, putative acetyl-CoA carboxylas 0.003
TIGR02927579 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena 0.004
TIGR02927 579 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena 0.004
>gnl|CDD|215716 pfam00100, Zona_pellucida, Zona pellucida-like domain Back     alignment and domain information 
 Score =  120 bits (302), Expect = 3e-30
 Identities = 48/266 (18%), Positives = 85/266 (31%), Gaps = 39/266 (14%)

Query: 1   MRVNIEFDRPF-YGMIFSKGYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGG 59
           M V +  D  F  G+  S  +  D  C      T    A F   L+SCG +         
Sbjct: 7   MTVVVSKDLTFTPGLYLSSLHLGDPSCRP--VETNSTHAIFRFPLSSCGTTR-------- 56

Query: 60  VTTPSGSYVENTIIIQYDPYVQEV----WDQARKLRCTWYDFYEKAVTFRPFQVDMLHAV 115
             T  G   EN I+ Q    V        D+   + C     Y            +    
Sbjct: 57  QRTGDGIVYENEIVSQPSVSVGPPITRDSDRRLPVSC----SYTSRSVSVSSVAVLPTVP 112

Query: 116 TANFLG---DNLQCWMQIQVGKGPWASEV-SGIVKIGQTMTMVLAIKDDENKFD--MLVR 169
             +       +L   +++        +      +++G  + +   +          + + 
Sbjct: 113 PVSPSPSGEGSLTFSLRLY--TDDSYTSDYPVTIELGDPLYVEATVSVLPRSDPLVLFLD 170

Query: 170 NCVAHDGKRAP----IQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDS 225
           +C A  G          L+ ++GC V     S      +    +    F+ F+AF+FP  
Sbjct: 171 SCWATPGPDPDSSPRYDLI-ENGCPVDGDSTSTLS---HPVGESHTARFS-FKAFRFPGD 225

Query: 226 MN-VHFQCVIQVCRYNCPE--PRCGG 248
            + V+  C ++VC  + P   P C  
Sbjct: 226 SSQVYIHCSVKVCDKSDPSCKPTCSR 251

Length = 252
>gnl|CDD|215716 pfam00100, Zona_pellucida, Zona pellucida-like domain Back     alignment and domain information
>gnl|CDD|214579 smart00241, ZP, Zona pellucida (ZP) domain Back     alignment and domain information
>gnl|CDD|214579 smart00241, ZP, Zona pellucida (ZP) domain Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|235540 PRK05641, PRK05641, putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated Back     alignment and domain information
>gnl|CDD|235540 PRK05641, PRK05641, putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated Back     alignment and domain information
>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Back     alignment and domain information
>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1009
smart00241253 ZP Zona pellucida (ZP) domain. ZP proteins are res 100.0
smart00241253 ZP Zona pellucida (ZP) domain. ZP proteins are res 100.0
PF00100265 Zona_pellucida: Zona pellucida-like domain; InterP 99.94
PF00100265 Zona_pellucida: Zona pellucida-like domain; InterP 99.92
>smart00241 ZP Zona pellucida (ZP) domain Back     alignment and domain information 
Probab=100.00  E-value=1.6e-33  Score=301.11  Aligned_cols=231  Identities=24%  Similarity=0.426  Sum_probs=190.2

Q ss_pred             CEEEEEcCCCcccEEEecccCC-CCCCeeecCCCCceEEEEEEecCCCCccccccCCCCCccCCCceEEEEEEEEE-ecC
Q psy5478           1 MRVNIEFDRPFYGMIFSKGYYS-DSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQ-YDP   78 (1009)
Q Consensus         1 M~V~i~t~~PF~G~IYvKG~~~-dp~C~~~~~g~gsts~~F~Ipl~~CGt~r~~~~~~~~~~~p~Gv~ysntVVVQ-fHP   78 (1009)
                      |.|.|++..+|.|+||+++.+. |+.|+..+...+.+.+.|++++++||++++.        ++.++.|+|+|+++ +|+
T Consensus         7 m~v~v~~~~~~~g~i~~~~l~l~d~~C~~~~~~~~~~~~~f~~~l~~CGt~~~~--------~~~~~~ysn~v~~~~~~~   78 (253)
T smart00241        7 MVVSVSTDLLFPGGIYVKGLYLGDPSCRPVFTDSTSAFVSFEVPLNGCGTRRQV--------NPDGIVYSNTLVVSPFHP   78 (253)
T ss_pred             EEEEEEecCCCCCeEEEeeEEeCCCCCCCccccCCCcEEEEEeccccCCCeEEE--------CCCeEEEEEEEEEccCCC
Confidence            8999999999999999999776 8999996445567899999999999999753        45689999999999 799


Q ss_pred             ceeEeece-eEEEEEEecccccceeEeeeeeecccceeeee-ccCCCceEEEEEEeccCCCcccceeee--eeCcEEEEE
Q psy5478          79 YVQEVWDQ-ARKLRCTWYDFYEKAVTFRPFQVDMLHAVTAN-FLGDNLQCWMQIQVGKGPWASEVSGIV--KIGQTMTMV  154 (1009)
Q Consensus        79 ~~~T~~Dr-ay~V~C~y~~~~eKtVt~~p~~Vs~l~~~~~~-~~~~~p~C~M~I~~G~GP~g~pVs~~V--kVGq~L~~~  154 (1009)
                      .++|..|+ .|+++|.|.. ..+ ++. .+.+..+....+. ...+.+.|+|+|+.+. .|++++....  +|||+|+|+
T Consensus        79 ~~itr~~~~~~~~~C~y~~-~~~-~~~-~~~~~~~~~~~~~~~~~g~~~~~m~l~~~~-~~~~~~~~~~~~~lg~~l~~~  154 (253)
T smart00241       79 GFITRDDRAAYHFQCFYPE-NEK-VSL-NLDVSTIPPTELSSVSEGPPTCSYRLYKDD-SFGSPYQSADYPVLGDPVYHE  154 (253)
T ss_pred             CceEecCceEEEEEEEEeC-CCc-eEE-EEEecCCCCCCcccccCCCcEEEEEeccCC-CCCCcccCCCCcccCCeEEEE
Confidence            99999999 9999999975 223 333 3444444322221 1245689999999975 5887775332  799999999


Q ss_pred             EEEecC-CCcccEEEeEEEEEcCC----CCcEEEEecCCCccCccccccceeeccCCCCcceEEEEEEeeEEcCCCCeEE
Q psy5478         155 LAIKDD-ENKFDMLVRNCVAHDGK----RAPIQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFPDSMNVH  229 (1009)
Q Consensus       155 w~c~~~-~~~y~m~V~sCvA~Dg~----g~~iqLIDenGC~lD~~Im~~f~y~~n~~~sas~va~a~f~AFKFpDs~~V~  229 (1009)
                      |+++.. ++.|+|+|++|||+++.    +.++.||| +||++|+.+++...|..+.    +..+++.|+||||+++..||
T Consensus       155 ~~~~~~~~~~~~l~v~~C~at~~~~~~~~~~~~lI~-~GC~~d~~~~~~~~~~~~~----~~~~~f~~~aF~F~~~~~v~  229 (253)
T smart00241      155 WSCDGADDPPLGLLVDNCYATPGSDPSSGPKYFIID-NGCPVDGYLDSTIPYNSSP----NHYARFSVKVFKFADRSLVY  229 (253)
T ss_pred             EEEccCCCCCeEEEEeeEEEcCCCCCCCCCcEEEEE-CccCCCCccccceecCCCC----cceEEEEEEEEEecCCCcEE
Confidence            999975 79999999999999987    58899999 9999999888888887651    24789999999999999999


Q ss_pred             EEEEEEEccC----CCCCCCCCC
Q psy5478         230 FQCVIQVCRY----NCPEPRCGG  248 (1009)
Q Consensus       230 FqC~V~IC~~----~Cppp~Cs~  248 (1009)
                      |||+|++|.+    .|..+.|+.
T Consensus       230 ~hC~v~vC~~~~~~~C~~~~C~~  252 (253)
T smart00241      230 FHCQIRLCDKSDGSSCDGPACSS  252 (253)
T ss_pred             EEEEEEEECCCCCCCCCCCcCCC
Confidence            9999999986    587668864

ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).
>smart00241 ZP Zona pellucida (ZP) domain Back     alignment and domain information
>PF00100 Zona_pellucida: Zona pellucida-like domain; InterPro: IPR001507 A large domain, containing around 260 amino acids, has been recognised in a variety of receptor-like eukaryotic glycoproteins [] Back     alignment and domain information
>PF00100 Zona_pellucida: Zona pellucida-like domain; InterPro: IPR001507 A large domain, containing around 260 amino acids, has been recognised in a variety of receptor-like eukaryotic glycoproteins [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1009
3nk4_A297 ZONA pellucida 3; fertilization, oocyte, egg coat, 5e-16
3nk4_A297 ZONA pellucida 3; fertilization, oocyte, egg coat, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A* Length = 297 Back     alignment and structure
 Score = 79.3 bits (194), Expect = 5e-16
 Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 19/256 (7%)

Query: 1   MRVNIEFDRPFYGMIFSKG--YYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVG 58
           + V +  D    G + +        + C H      H + TF   L+ CG          
Sbjct: 13  LVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQ------ 66

Query: 59  GVTTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTAN 118
              TP        I     P    V  +           Y +        +    +   +
Sbjct: 67  --VTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHYPRREQVSSNAIRPTWSPFNS 124

Query: 119 FLGDNLQCWMQIQVGKGPWASEV-SGIVKIGQTMTMVLAIK-DDENKFDMLVRNCVAH-- 174
            L    +    +++    W++E      ++G  + +   +  ++     + V +CVA   
Sbjct: 125 ALSAEERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVAALS 184

Query: 175 -DGKRAP-IQLVDQHGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFP--DSMNVHF 230
            DG  +P   ++D +GC+V  ++           P   V+ F     F+F   +   ++ 
Sbjct: 185 PDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRF-RIDVFRFAGDNRNLIYI 243

Query: 231 QCVIQVCRYNCPEPRC 246
            C ++V   +      
Sbjct: 244 TCHLKVTPADQGPDPQ 259
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1009
3nk4_A297 ZONA pellucida 3; fertilization, oocyte, egg coat, 99.8
3nk4_A297 ZONA pellucida 3; fertilization, oocyte, egg coat, 99.79
3qw9_A176 Transforming growth factor beta receptor type 3; c 99.27
3qw9_A176 Transforming growth factor beta receptor type 3; c 99.21
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A* Back     alignment and structure
Probab=99.80  E-value=8.3e-19  Score=191.92  Aligned_cols=212  Identities=16%  Similarity=0.264  Sum_probs=142.9

Q ss_pred             eeecCCCCeeecCCCCeeEEEEEEecCCCcCccccccccCCccCCCccEEEEEEEEEecC----ceEEeecceEEEEeEe
Q psy5478         514 RYYSDSHCVHLKPGTGHLSATFEIFLNSCGMSSSANHAVGGVTTPSGSYVENTIIIQYDP----YVQEVWDQARKLRCTW  589 (1009)
Q Consensus       514 G~~~Dp~Cr~~~~~tg~~sv~F~Ipl~~CGt~~~~~~~~~~~~~p~Gi~ysntVVVQ~HP----~~iT~~Dray~VrC~y  589 (1009)
                      -++.|+.|+....+.+.+.+.|.++++.|||+.+.+        +..+.|+|+|+....+    .|++...-.+.++|.|
T Consensus        33 L~L~d~~C~~~~~~~~~~~~~f~~~l~~CGT~~~~~--------~~~iiY~N~l~~~~~~~~~~~ItR~~~~~l~~~C~Y  104 (297)
T 3nk4_A           33 LTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQVT--------PDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHY  104 (297)
T ss_dssp             EEETTTTBCCSEEETTTTEEEEEEETTCTTCEEEEC--------SSEEEEEEEEEECCCCCSSTTEESSCCEEEEEEEEE
T ss_pred             eEECCCCCCCeeeCCCCcEEEEEecCCCCCceeEec--------CCEEEEEEEEEEeccCCCCCceEecccEEEEEEEEE
Confidence            456789999975332357899999999999997653        4468999999986532    3555566778899999


Q ss_pred             cccccceEEeeceeecccc-eeeeeeccCCceEEEEEEecCCCCCcce-eeeEeeCcEEEEEEEEecC-CCcccEEEeEE
Q psy5478         590 YDFYEKAVTFRPFQVDMLH-AVTANFLGDNLQCWMQIQVGKGPWASEV-SGIVKIGQTMTMVLAIKDD-ENKFDMLVRNC  666 (1009)
Q Consensus       590 ~~~~eKtVt~~p~~Vd~l~-~vt~~~~~~~P~C~M~I~~g~GP~g~pV-s~~VkVGq~L~h~w~c~~~-~~~y~m~V~sC  666 (1009)
                      ...  ..|+...+.....+ ..+.. ..+.....|+|..++  +..+. ...+.+||+||+++++... +..+.++|++|
T Consensus       105 ~~~--~~vs~~~~~p~~~~~~~~~~-~~g~~~~~m~l~~d~--~~~~~~~~~~~l~~~lyvev~v~~~~~~~l~l~l~~C  179 (297)
T 3nk4_A          105 PRR--EQVSSNAIRPTWSPFNSALS-AEERLVFSLRLMSDD--WSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSC  179 (297)
T ss_dssp             EC------------CCBCTTC-------CCCCEEEEEECTT--SSSBCCSCCBCTTCEEEEEEEECCTTBCCEEEEEEEE
T ss_pred             cCC--CccccccCcCcccccccccc-cccceEEEEEeccCC--CcccccCCcccCCCEEEEEEEEecCCCCCEEEEEeeE
Confidence            753  23332111100000 11111 123457899999864  32221 2246899999999999763 46899999999


Q ss_pred             EEEcCC----CCcEEEEecCCCccCcccc---ccceeeccCCCCceeEEEEEeeeeEcCC--CCeEEEEEEEEEccC---
Q psy5478         667 VAHDGK----RAPIQLVDQHGCVVRPKIM---SKFQKIKNFGPSASVVSFAYFQAFKFPD--SMNVHFQCVIQVCRY---  734 (1009)
Q Consensus       667 ~A~Dg~----g~~~~LIDenGCslD~~Im---~~f~y~~n~g~~as~~a~a~F~AFKFPD--s~~V~FqC~V~lC~~---  734 (1009)
                      ||++..    ..++.||+.+||+.|.++.   ..|.+. +   +.+..+++.|+||||.+  ...|||||.|.+|..   
T Consensus       180 ~ATps~~~~~~~~y~lI~~~GC~~d~~~~~~~s~~~~~-~---~~~~~~rF~~~~F~F~~~~~~~vylhC~v~vC~~~~~  255 (297)
T 3nk4_A          180 VAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITP-R---PREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPADQG  255 (297)
T ss_dssp             EEESSSCTTSSSEEEEEBTTTEEGGGGSTTCCCEECSS-C---SSTTEEEEEEECCEETTCSSCEEEEEEEEEEEETTCC
T ss_pred             EEeCCCCccCCceEEEEccCCCCcCCccccceeEEecC-C---CCCceEEEEEEeEeccCCCCCeEEEEEEEEEECCCCC
Confidence            999874    2568999779999999875   233211 1   11247899999999998  689999999999975   


Q ss_pred             --CCCCCCCCC
Q psy5478         735 --NCPEPRCGG  743 (1009)
Q Consensus       735 --~C~pp~Cs~  743 (1009)
                        .|.+ .|+.
T Consensus       256 ~~~C~~-~C~~  265 (297)
T 3nk4_A          256 PDPQNK-ACSF  265 (297)
T ss_dssp             CBTTBC-CEEE
T ss_pred             CCcccC-cCCC
Confidence              3644 6754
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A* Back     alignment and structure
>3qw9_A Transforming growth factor beta receptor type 3; cytokine receptor, immunoglobulin domain, ZONA pellucida, TG ligand CO-receptor; HET: NAG BMA FUC MAN; 2.00A {Rattus norvegicus} Back     alignment and structure
>3qw9_A Transforming growth factor beta receptor type 3; cytokine receptor, immunoglobulin domain, ZONA pellucida, TG ligand CO-receptor; HET: NAG BMA FUC MAN; 2.00A {Rattus norvegicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00