Psyllid ID: psy5653
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | 2.2.26 [Sep-21-2011] | |||||||
| O75439 | 489 | Mitochondrial-processing | yes | N/A | 0.514 | 0.779 | 0.644 | 1e-149 | |
| Q3SZ71 | 490 | Mitochondrial-processing | yes | N/A | 0.513 | 0.775 | 0.649 | 1e-148 | |
| Q5REK3 | 489 | Mitochondrial-processing | yes | N/A | 0.512 | 0.775 | 0.648 | 1e-148 | |
| Q9CXT8 | 489 | Mitochondrial-processing | yes | N/A | 0.514 | 0.779 | 0.637 | 1e-145 | |
| Q03346 | 489 | Mitochondrial-processing | yes | N/A | 0.514 | 0.779 | 0.629 | 1e-145 | |
| Q9CZ13 | 480 | Cytochrome b-c1 complex s | no | N/A | 0.512 | 0.789 | 0.531 | 1e-122 | |
| P31930 | 480 | Cytochrome b-c1 complex s | no | N/A | 0.516 | 0.795 | 0.522 | 1e-122 | |
| P31800 | 480 | Cytochrome b-c1 complex s | no | N/A | 0.516 | 0.795 | 0.519 | 1e-121 | |
| Q68FY0 | 480 | Cytochrome b-c1 complex s | no | N/A | 0.513 | 0.791 | 0.527 | 1e-120 | |
| Q9Y8B5 | 466 | Mitochondrial-processing | N/A | N/A | 0.508 | 0.806 | 0.532 | 1e-109 |
| >sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2 | Back alignment and function desciption |
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Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/383 (64%), Positives = 300/383 (78%), Gaps = 2/383 (0%)
Query: 357 IDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLG 416
GT KRSQ DLELE+EN+GAHLNAYTSREQTV+YAK +D+P+AVEILADIIQNS LG
Sbjct: 108 FKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLG 167
Query: 417 QAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLL 476
+AEIERERGVILREMQEVETNLQEVVFD+LHATA+Q T LG TILGPT+NIKS+ R+DL+
Sbjct: 168 EAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLV 227
Query: 477 DYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVR 536
DY+ Y+ R+VL+ AGGV HD L+ LAK HFG+ + +PP C++TGS++R
Sbjct: 228 DYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPP--CKFTGSEIR 285
Query: 537 VRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQG 596
VRDD MPLAH+A+AVE GW D I LMVANTLIG WDRS G G N +S+LA +T
Sbjct: 286 VRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGN 345
Query: 597 FAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLK 656
HSFQSFNT Y DTGLWG+Y V + + DM VQ EW+RLC +VT +EV RA+NLLK
Sbjct: 346 LCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLK 405
Query: 657 SNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCPVV 716
+N+ LQLDG+TP+CEDIGRQ+LCY RR+P+ ELEARID V A+ I EVCTKYI++R P +
Sbjct: 406 TNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAI 465
Query: 717 AAVGPTEQLPDYTWLRQSMYWIR 739
AAVGP +QLPD+ +R +M W+R
Sbjct: 466 AAVGPIKQLPDFKQIRSNMCWLR 488
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Cleaves presequences (transit peptides) from mitochondrial protein precursors. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 6EC: 4 |
| >sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1 | Back alignment and function description |
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| >sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | ||||||
| 289742991 | 474 | mitochondrial processing peptidase beta | 0.504 | 0.786 | 0.718 | 1e-168 | |
| 307176240 | 477 | Mitochondrial-processing peptidase subun | 0.513 | 0.796 | 0.721 | 1e-168 | |
| 195451318 | 470 | GK13463 [Drosophila willistoni] gi|19416 | 0.506 | 0.797 | 0.723 | 1e-168 | |
| 389609311 | 467 | mitochondrial processing peptidase beta | 0.510 | 0.809 | 0.719 | 1e-168 | |
| 347964781 | 474 | AGAP000935-PA [Anopheles gambiae str. PE | 0.513 | 0.801 | 0.719 | 1e-168 | |
| 194743290 | 470 | GF16898 [Drosophila ananassae] gi|190627 | 0.506 | 0.797 | 0.725 | 1e-168 | |
| 195108833 | 470 | GI23318 [Drosophila mojavensis] gi|19391 | 0.509 | 0.802 | 0.724 | 1e-168 | |
| 322803096 | 477 | hypothetical protein SINV_10420 [Solenop | 0.510 | 0.792 | 0.723 | 1e-167 | |
| 195395272 | 470 | GJ10322 [Drosophila virilis] gi|19414296 | 0.509 | 0.802 | 0.724 | 1e-167 | |
| 194900870 | 470 | GG16882 [Drosophila erecta] gi|190651681 | 0.509 | 0.802 | 0.729 | 1e-167 |
| >gi|289742991|gb|ADD20243.1| mitochondrial processing peptidase beta subunit [Glossina morsitans morsitans] | Back alignment and taxonomy information |
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Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/387 (71%), Positives = 323/387 (83%), Gaps = 14/387 (3%)
Query: 359 GTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQA 418
GTSKRSQTDLELEVEN+GAHLNAYTSREQTVFYAKCL +DVPK+VEILADIIQNSKLG++
Sbjct: 95 GTSKRSQTDLELEVENMGAHLNAYTSREQTVFYAKCLSKDVPKSVEILADIIQNSKLGES 154
Query: 419 EIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDY 478
EIERER VILREMQEVE+NLQEVVFDHLHATA+QGTPLG TILGPT+NIKS+ R DL Y
Sbjct: 155 EIERERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIKSIGRNDLQAY 214
Query: 479 VNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNV------KPPNVDCAGVVPPAHCRYTG 532
++ Y+ +R+VLSGAGGV H LV+LA++H G + KPP++D CR+TG
Sbjct: 215 ISTHYKASRIVLSGAGGVKHKELVQLAEQHLGKMDNTYDGKPPSMD--------PCRFTG 266
Query: 533 SDVRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAIT 592
S+VRVRDD++PLAH+A+AVEGCGW DNIPLMVANTLIGAWDRSQG G NNAS LA +
Sbjct: 267 SEVRVRDDSLPLAHIAIAVEGCGWSDQDNIPLMVANTLIGAWDRSQGGGVNNASNLARAS 326
Query: 593 AEQGFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTPAEVERAK 652
AE HSFQSFNTCYKDTGLWG+Y+V D ++ E+M F++Q EW+RLC VT AEVERAK
Sbjct: 327 AEDNLCHSFQSFNTCYKDTGLWGIYYVCDPLECENMLFNIQTEWMRLCTMVTEAEVERAK 386
Query: 653 NLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDR 712
NLLK+N+ LQLDGTTP+CEDIGRQILCYGRR+PLHELE RI+ V K+I +V KYI+DR
Sbjct: 387 NLLKTNMLLQLDGTTPICEDIGRQILCYGRRIPLHELEQRIEAVDVKNIRDVAMKYIYDR 446
Query: 713 CPVVAAVGPTEQLPDYTWLRQSMYWIR 739
CP VAAVGP E LPDY +R SMYW+R
Sbjct: 447 CPAVAAVGPVENLPDYNRIRSSMYWLR 473
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Source: Glossina morsitans morsitans Species: Glossina morsitans Genus: Glossina Family: Glossinidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307176240|gb|EFN65875.1| Mitochondrial-processing peptidase subunit beta [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|195451318|ref|XP_002072862.1| GK13463 [Drosophila willistoni] gi|194168947|gb|EDW83848.1| GK13463 [Drosophila willistoni] | Back alignment and taxonomy information |
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| >gi|389609311|dbj|BAM18267.1| mitochondrial processing peptidase beta subunit [Papilio xuthus] | Back alignment and taxonomy information |
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| >gi|347964781|ref|XP_309120.4| AGAP000935-PA [Anopheles gambiae str. PEST] gi|333466476|gb|EAA04978.5| AGAP000935-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
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| >gi|194743290|ref|XP_001954133.1| GF16898 [Drosophila ananassae] gi|190627170|gb|EDV42694.1| GF16898 [Drosophila ananassae] | Back alignment and taxonomy information |
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| >gi|195108833|ref|XP_001998997.1| GI23318 [Drosophila mojavensis] gi|193915591|gb|EDW14458.1| GI23318 [Drosophila mojavensis] | Back alignment and taxonomy information |
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| >gi|322803096|gb|EFZ23184.1| hypothetical protein SINV_10420 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|195395272|ref|XP_002056260.1| GJ10322 [Drosophila virilis] gi|194142969|gb|EDW59372.1| GJ10322 [Drosophila virilis] | Back alignment and taxonomy information |
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| >gi|194900870|ref|XP_001979978.1| GG16882 [Drosophila erecta] gi|190651681|gb|EDV48936.1| GG16882 [Drosophila erecta] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | ||||||
| FB|FBgn0038271 | 470 | CG3731 [Drosophila melanogaste | 0.520 | 0.819 | 0.720 | 3.6e-176 | |
| UNIPROTKB|F1SB55 | 489 | PMPCB "Uncharacterized protein | 0.522 | 0.791 | 0.651 | 2e-160 | |
| UNIPROTKB|I3LHS1 | 489 | LOC100624058 "Uncharacterized | 0.522 | 0.791 | 0.651 | 2e-160 | |
| UNIPROTKB|F1PUK2 | 513 | PMPCB "Uncharacterized protein | 0.522 | 0.754 | 0.643 | 1.8e-159 | |
| UNIPROTKB|Q3SZ71 | 490 | PMPCB "Mitochondrial-processin | 0.521 | 0.787 | 0.645 | 3.3e-158 | |
| UNIPROTKB|O75439 | 489 | PMPCB "Mitochondrial-processin | 0.522 | 0.791 | 0.641 | 2.3e-157 | |
| UNIPROTKB|E1B941 | 490 | PMPCB "Mitochondrial-processin | 0.520 | 0.785 | 0.643 | 3e-157 | |
| UNIPROTKB|F1P3S2 | 471 | PMPCB "Uncharacterized protein | 0.521 | 0.819 | 0.641 | 6.2e-157 | |
| MGI|MGI:1920328 | 489 | Pmpcb "peptidase (mitochondria | 0.522 | 0.791 | 0.633 | 9e-156 | |
| RGD|621297 | 489 | Pmpcb "peptidase (mitochondria | 0.522 | 0.791 | 0.625 | 4.9e-155 |
| FB|FBgn0038271 CG3731 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 1476 (524.6 bits), Expect = 3.6e-176, Sum P(2) = 3.6e-176
Identities = 281/390 (72%), Positives = 321/390 (82%)
Query: 351 HELE-ARIDGTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADI 409
H LE GT+KRSQTDLELEVEN+GAHLNAYTSREQTVFYAKCL +DVPKAVEILADI
Sbjct: 84 HFLEHMAFKGTAKRSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADI 143
Query: 410 IQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKS 469
IQNSKLG+AEI RER VILREMQEVE+NLQEVVFDHLHATA+QGTPLG TILGPT+NI+S
Sbjct: 144 IQNSKLGEAEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQS 203
Query: 470 LQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCR 529
+ + DL DY+ Y+ +R+VL+ AGGV HD LVKLA G ++ +V A V P CR
Sbjct: 204 IGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGLEA-SVLPAEVTP---CR 259
Query: 530 YTGSDVRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLA 589
+TGS+VRVRDD++PLAHVA+AVEGCGW DNIPLMVANTL+GAWDRSQG G NNAS LA
Sbjct: 260 FTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLA 319
Query: 590 AITAEQGFAHSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTPAEVE 649
+AE HSFQSFNTCYKDTGLWG+YFV D +Q EDM F+VQ EW+RLC VT AEVE
Sbjct: 320 RASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVE 379
Query: 650 RAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYI 709
RAKNLLK+N+ LQLDGTTP+CEDIGRQILCY RR+PLHELE RID V+ ++ +V KYI
Sbjct: 380 RAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHELEQRIDAVSVGNVRDVAMKYI 439
Query: 710 WDRCPVVAAVGPTEQLPDYTWLRQSMYWIR 739
+DRCP VAAVGP E LPDY +R SMYW+R
Sbjct: 440 YDRCPAVAAVGPVENLPDYNRIRSSMYWLR 469
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| UNIPROTKB|F1SB55 PMPCB "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LHS1 LOC100624058 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PUK2 PMPCB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3SZ71 PMPCB "Mitochondrial-processing peptidase subunit beta" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O75439 PMPCB "Mitochondrial-processing peptidase subunit beta" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1B941 PMPCB "Mitochondrial-processing peptidase subunit beta" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P3S2 PMPCB "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1920328 Pmpcb "peptidase (mitochondrial processing) beta" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|621297 Pmpcb "peptidase (mitochondrial processing) beta" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q3SZ71 | MPPB_BOVIN | 3, ., 4, ., 2, 4, ., 6, 4 | 0.6492 | 0.5135 | 0.7755 | yes | N/A |
| Q5REK3 | MPPB_PONAB | 3, ., 4, ., 2, 4, ., 6, 4 | 0.6482 | 0.5121 | 0.7750 | yes | N/A |
| O75439 | MPPB_HUMAN | 3, ., 4, ., 2, 4, ., 6, 4 | 0.6449 | 0.5148 | 0.7791 | yes | N/A |
| Q9CXT8 | MPPB_MOUSE | 3, ., 4, ., 2, 4, ., 6, 4 | 0.6370 | 0.5148 | 0.7791 | yes | N/A |
| Q03346 | MPPB_RAT | 3, ., 4, ., 2, 4, ., 6, 4 | 0.6292 | 0.5148 | 0.7791 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.24 | 0.766 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 740 | |||
| COG0612 | 438 | COG0612, PqqL, Predicted Zn-dependent peptidases [ | 1e-71 | |
| pfam00675 | 149 | pfam00675, Peptidase_M16, Insulinase (Peptidase fa | 2e-40 | |
| pfam05193 | 182 | pfam05193, Peptidase_M16_C, Peptidase M16 inactive | 9e-39 | |
| pfam00675 | 149 | pfam00675, Peptidase_M16, Insulinase (Peptidase fa | 2e-16 | |
| COG0612 | 438 | COG0612, PqqL, Predicted Zn-dependent peptidases [ | 5e-14 | |
| COG1025 | 937 | COG1025, Ptr, Secreted/periplasmic Zn-dependent pe | 3e-07 | |
| TIGR02110 | 696 | TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis | 7e-06 |
| >gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 1e-71
Identities = 112/378 (29%), Positives = 187/378 (49%), Gaps = 18/378 (4%)
Query: 359 GTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQA 418
GT+ +L E +G LNA+TS + TV+Y L ++ KA+++LADI+ N +
Sbjct: 70 GTTGLPSAELAEAFEKLGGQLNAFTSFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEE 129
Query: 419 EIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDY 478
E+ERE+GVIL E++ + + ++ F+ L + PLG ILG ++I+++ R+DL D+
Sbjct: 130 EVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAITREDLKDF 189
Query: 479 VNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVR 538
+YQP MVL G VD + +V+L +++FG++ +PP VRV
Sbjct: 190 YQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAP--PPKIPPEPPLGPERVVRVN 247
Query: 539 DDAMP---LAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRL-AAITAE 594
D P A +AL G ++S D+ ++ + S SRL + +
Sbjct: 248 DPEQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFS--------SRLFQELREK 299
Query: 595 QGFAHSFQSFNTCYKDTGLWGVYFVADRMQLE---DMTFSVQHEWIRLCKT-VTPAEVER 650
+G A+S SF+ D+GL+ +Y E ++ + + K T E++
Sbjct: 300 RGLAYSVSSFSDFLSDSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDA 359
Query: 651 AKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIW 710
AK LL L L LD + + E +G+ +L G + L EL RI+ VT +D++ V K +
Sbjct: 360 AKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKKLLA 419
Query: 711 DRCPVVAAVGPTEQLPDY 728
+ +GP + L D
Sbjct: 420 PENLTIVVLGPEKALKDL 437
|
Length = 438 |
| >gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) | Back alignment and domain information |
|---|
| >gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain | Back alignment and domain information |
|---|
| >gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) | Back alignment and domain information |
|---|
| >gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 740 | |||
| PRK15101 | 961 | protease3; Provisional | 100.0 | |
| KOG0959|consensus | 974 | 100.0 | ||
| KOG0960|consensus | 467 | 100.0 | ||
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 100.0 | |
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 100.0 | |
| KOG2067|consensus | 472 | 100.0 | ||
| PTZ00432 | 1119 | falcilysin; Provisional | 100.0 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 100.0 | |
| PRK15101 | 961 | protease3; Provisional | 100.0 | |
| KOG0960|consensus | 467 | 100.0 | ||
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 99.97 | |
| PTZ00432 | 1119 | falcilysin; Provisional | 99.97 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 99.97 | |
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 99.93 | |
| KOG0959|consensus | 974 | 99.91 | ||
| KOG2019|consensus | 998 | 99.91 | ||
| KOG2583|consensus | 429 | 99.91 | ||
| KOG2067|consensus | 472 | 99.91 | ||
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 99.9 | |
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 99.9 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 99.85 | |
| KOG2019|consensus | 998 | 99.82 | ||
| KOG0961|consensus | 1022 | 99.81 | ||
| KOG0961|consensus | 1022 | 99.77 | ||
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 99.57 | |
| KOG2583|consensus | 429 | 99.44 | ||
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 99.4 | |
| PF08367 | 248 | M16C_assoc: Peptidase M16C associated; InterPro: I | 96.93 | |
| PF03410 | 590 | Peptidase_M44: Protein G1; InterPro: IPR005072 In | 95.14 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 94.51 | |
| PHA03081 | 595 | putative metalloprotease; Provisional | 92.91 |
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-53 Score=497.23 Aligned_cols=678 Identities=12% Similarity=0.064 Sum_probs=450.1
Q ss_pred cCCCCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc-------CCCCc
Q psy5653 15 KSVNVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI-------KPEYG 86 (740)
Q Consensus 15 ~~~~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~-------~~~~~ 86 (740)
++.+.+.|++.+|+|||+|+ ++++..|+++++++|++||++||++++|+|||||||||+||++++.. ...||
T Consensus 37 ~~~d~~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg 116 (961)
T PRK15101 37 SEKDPRQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGG 116 (961)
T ss_pred CCCCccceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCC
Confidence 66788899999999999999 89999999999999999999999999999999999999999988531 22377
Q ss_pred chhhhhhhhhhh-----------------------cccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCC
Q psy5653 87 PLLVELSEEQVY-----------------------MHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQ 131 (740)
Q Consensus 87 ~~~~~~~~~~~~-----------------------~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~ 131 (740)
..||+|..+.|. |.|+++++++|++ +|.+|+.. +...+++.|+
T Consensus 117 ~~NA~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~--~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp 194 (961)
T PRK15101 117 SHNASTASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERN--AVNAELTMARSRDGMRMAQVSAETINPAHP 194 (961)
T ss_pred CccceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHH--HHHHHHHHhcCCHHHHHHHHHHhhCCCCCC
Confidence 888888666553 6667799999999 99999764 2345667899
Q ss_pred CCccccccHHHHHHh----hHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcccccccccccCC--
Q psy5653 132 NGRNIVLSNREIRLL----RYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVISG-- 193 (740)
Q Consensus 132 ~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (740)
+++...|+...+..+ +..++..++..+|.+... +..++.+.|+.|+.+..............
T Consensus 195 ~~~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~ 274 (961)
T PRK15101 195 GSRFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVPVVTDAQ 274 (961)
T ss_pred cccCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCHHH
Confidence 999999999999775 588999999999886444 56667889999976432111000000000
Q ss_pred CC-----CCCCCCCccCcccCCCCCCCchhh----HHHHHHHhcc---chhhhhhHHHHHHHHHhhccccccc-CCccch
Q psy5653 194 RS-----TPSDSGSCSGDIISPTEPLSLTDS----MLLMDDILSD---SRLDQLDRIERIEAILTAENVAQIK-PEYGPL 260 (740)
Q Consensus 194 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 260 (740)
.. .+. ..+....+.++.... .+++ ..++..++|+ ++|.... .+++.++...+...... .+.+.+
T Consensus 275 ~~~~~~~~~~-~~~~~l~l~~~~p~~-~~~~~~~~~~~l~~ll~~~~~g~l~~~L-~~~gla~~v~s~~~~~~~~~~g~f 351 (961)
T PRK15101 275 KGIIIHYVPA-QPRKVLRVEFRIDNN-SAKFRSKTDEYISYLIGNRSPGTLSDWL-QKQGLAEGISAGADPMVDRNSGVF 351 (961)
T ss_pred cCeEEEEEEC-CCCcEEEEEEecCCc-HHHHhhCHHHHHHHHhcCCCCCcHHHHH-HHcCccceeeeccccccCCCceEE
Confidence 00 011 122223333332111 1111 3456677775 2344444 35555554433221110 000000
Q ss_pred hhhhhccceeeeecCc----------------------------------------------------------------
Q psy5653 261 LVELSEEQVYMHIKPN---------------------------------------------------------------- 276 (740)
Q Consensus 261 ~~~l~~~~~~~~~~p~---------------------------------------------------------------- 276 (740)
.+.+.+.|.
T Consensus 352 -------~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (961)
T PRK15101 352 -------AISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPV 424 (961)
T ss_pred -------EEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCH
Confidence 111111110
Q ss_pred --------------------------------------hhHHh---hhhcccChhHHHHHHHHHHHhhhccC--------
Q psy5653 277 --------------------------------------EVRQR---KKQRKIDNEDMTFSVQHEWIRLCKTV-------- 307 (740)
Q Consensus 277 --------------------------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 307 (740)
..... -.+++|+++++...+.+.|.......
T Consensus 425 ~~~l~~~~~~~~~~~~~i~~~~~~l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~l~lP~~n 504 (961)
T PRK15101 425 EHTLDAPYIADRYDPKAIKARLAEMTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKAQNIALSLPELN 504 (961)
T ss_pred HHheeCchhhhcCCHHHHHHHHhhcCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCCCCccCCCCCCC
Confidence 00000 01336777788888888886532211
Q ss_pred ----ChhHHHHH----------hhhccceEEEeccC---CCCceecccceecccCCcc-chhhHHHhhccCCCCChhHHH
Q psy5653 308 ----TPAEVERA----------KNLLKSNLFLQLDG---TTPVCEDIGRQILCYGRRV-PLHELEARIDGTSKRSQTDLE 369 (740)
Q Consensus 308 ----s~~el~~~----------k~~l~~~~~~~~d~---~~~~~~~ig~~~~~~~~~~-~~~~l~~~~~gt~~~~~~~l~ 369 (740)
++..+... ....+..+++.+++ ..|.+.............. ....+..++.........++.
T Consensus 505 ~fip~~~~~~~~~~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~l~e~~ 584 (961)
T PRK15101 505 PYIPDDFSLIKADKAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLALDQLS 584 (961)
T ss_pred CccCCCCeeccCCCCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111110 01111234555555 3344432221111111111 111222233333345566788
Q ss_pred HHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHH
Q psy5653 370 LEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVE-TNLQEVVFDHLHA 448 (740)
Q Consensus 370 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~-~~p~~~~~~~~~~ 448 (740)
+..+.+|++++.. +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+++++++.. ..+...+...+
T Consensus 585 y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~-- 661 (961)
T PRK15101 585 NQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGKAYEQAIMPA-- 661 (961)
T ss_pred chHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccCcHHHHHHHH--
Confidence 8888889999999 7999999999999999999999999999999999999999999999997543 34444443322
Q ss_pred HhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCc
Q psy5653 449 TAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHC 528 (740)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 528 (740)
..+..|||+.. .++.+.|+++|.+++++|++++|.+.|++++|+||++.+++.++++++++.++..+......... .
T Consensus 662 ~~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~~~~~~~~--~ 738 (961)
T PRK15101 662 QMLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTEWWRGKDV--V 738 (961)
T ss_pred HHHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcccccccce--E
Confidence 34568898764 56889999999999999999999999999999999999999999999888886532210000000 0
Q ss_pred ccCCCee-EEeCCCCCceeEEEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeEEEEeecc
Q psy5653 529 RYTGSDV-RVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAHSFQSFNT 606 (740)
Q Consensus 529 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y~v~~~~~ 606 (740)
...+... ....+...++.+.+++...+. +.....+++.+|| ++ +++|||++|||+ |+||+|+++..
T Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~v~~~lLg-------~~--~ssrlf~~LRtk~qLgY~V~s~~~ 806 (961)
T PRK15101 739 VDKKQSVNFEKAGSSTDSALAAVYVPTGY---DEYQSSAYSSLLG-------QI--IQPWFYNQLRTEEQLGYAVFAFPM 806 (961)
T ss_pred eCCCCeEEEecCCCCCCCeEEEEEEeCCC---CCHHHHHHHHHHH-------HH--HhHHHHHHHHHHhhhceEEEEEee
Confidence 0011111 222223334445555532222 2367778888886 33 489999999996 99999999988
Q ss_pred cCCCCceEEEEEEeCC---CCHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhCCC
Q psy5653 607 CYKDTGLWGVYFVADR---MQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQILCYGRR 683 (740)
Q Consensus 607 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
...+.+.+.+.++++. +.+...++.|++.+....+++|++||+++|+++++.+....+++...+.++|..+..++..
T Consensus 807 ~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~ 886 (961)
T PRK15101 807 SVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMR 886 (961)
T ss_pred ccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCC
Confidence 8777788888888764 4455566666655432235899999999999999999999999999999999988755555
Q ss_pred CC-hHHHHHHHcccCHHHHHHHHHHh-ccCCCcE--EEEEcCC
Q psy5653 684 VP-LHELEARIDDVTAKDIHEVCTKY-IWDRCPV--VAAVGPT 722 (740)
Q Consensus 684 ~~-~~~~~~~i~~vT~edv~~~~~~~-l~~~~~~--~~v~g~~ 722 (740)
++ .+++.+.|++||++||++++++| +.++... +.+.|..
T Consensus 887 fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~~~~~~ 929 (961)
T PRK15101 887 FDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQISGSQ 929 (961)
T ss_pred cChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEEeeccC
Confidence 55 58899999999999999999998 6655533 3444443
|
|
| >KOG0959|consensus | Back alignment and domain information |
|---|
| >KOG0960|consensus | Back alignment and domain information |
|---|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2067|consensus | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
| >KOG0960|consensus | Back alignment and domain information |
|---|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0959|consensus | Back alignment and domain information |
|---|
| >KOG2019|consensus | Back alignment and domain information |
|---|
| >KOG2583|consensus | Back alignment and domain information |
|---|
| >KOG2067|consensus | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG2019|consensus | Back alignment and domain information |
|---|
| >KOG0961|consensus | Back alignment and domain information |
|---|
| >KOG0961|consensus | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG2583|consensus | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PHA03081 putative metalloprotease; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 740 | ||||
| 1bcc_A | 446 | Cytochrome Bc1 Complex From Chicken Length = 446 | 1e-126 | ||
| 3cwb_A | 446 | Chicken Cytochrome Bc1 Complex Inhibited By An Iodi | 1e-125 | ||
| 1sqb_A | 480 | Crystal Structure Analysis Of Bovine Bc1 With Azoxy | 1e-122 | ||
| 1qcr_A | 446 | Crystal Structure Of Bovine Mitochondrial Cytochrom | 1e-122 | ||
| 1bgy_A | 446 | Cytochrome Bc1 Complex From Bovine Length = 446 | 1e-122 | ||
| 1hr6_B | 443 | Yeast Mitochondrial Processing Peptidase Length = 4 | 2e-88 | ||
| 1hr7_B | 443 | Yeast Mitochondrial Processing Peptidase Beta-E73q | 2e-88 | ||
| 1kb9_A | 431 | Yeast Cytochrome Bc1 Complex Length = 431 | 3e-38 | ||
| 1ezv_A | 430 | Structure Of The Yeast Cytochrome Bc1 Complex Co- C | 3e-38 | ||
| 3hdi_A | 421 | Crystal Structure Of Bacillus Halodurans Metallo Pe | 2e-36 | ||
| 1hr6_A | 475 | Yeast Mitochondrial Processing Peptidase Length = 4 | 2e-28 | ||
| 1bgy_B | 439 | Cytochrome Bc1 Complex From Bovine Length = 439 | 1e-23 | ||
| 1sqb_B | 453 | Crystal Structure Analysis Of Bovine Bc1 With Azoxy | 1e-23 | ||
| 1qcr_B | 423 | Crystal Structure Of Bovine Mitochondrial Cytochrom | 1e-23 | ||
| 3cwb_B | 441 | Chicken Cytochrome Bc1 Complex Inhibited By An Iodi | 9e-21 | ||
| 1bcc_B | 422 | Cytochrome Bc1 Complex From Chicken Length = 422 | 2e-19 | ||
| 3bcc_B | 422 | Stigmatellin And Antimycin Bound Cytochrome Bc1 Com | 2e-19 | ||
| 3eoq_A | 406 | The Crystal Structure Of Putative Zinc Protease Bet | 2e-18 | ||
| 3amj_B | 424 | The Crystal Structure Of The Heterodimer Of M16b Pe | 6e-08 | ||
| 3amj_C | 437 | The Crystal Structure Of The Heterodimer Of M16b Pe | 3e-07 | ||
| 3ami_A | 445 | The Crystal Structure Of The M16b Metallopeptidase | 3e-07 |
| >pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken Length = 446 | Back alignment and structure |
|
| >pdb|3CWB|A Chain A, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated Analogue Of The Polyketide Crocacin-d Length = 446 | Back alignment and structure |
| >pdb|1SQB|A Chain A, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin Length = 480 | Back alignment and structure |
| >pdb|1QCR|A Chain A, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex, Alpha Carbon Atoms Only Length = 446 | Back alignment and structure |
| >pdb|1BGY|A Chain A, Cytochrome Bc1 Complex From Bovine Length = 446 | Back alignment and structure |
| >pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 | Back alignment and structure |
| >pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 | Back alignment and structure |
| >pdb|1KB9|A Chain A, Yeast Cytochrome Bc1 Complex Length = 431 | Back alignment and structure |
| >pdb|1EZV|A Chain A, Structure Of The Yeast Cytochrome Bc1 Complex Co- Crystallized With An Antibody Fv-Fragment Length = 430 | Back alignment and structure |
| >pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 | Back alignment and structure |
| >pdb|1HR6|A Chain A, Yeast Mitochondrial Processing Peptidase Length = 475 | Back alignment and structure |
| >pdb|1BGY|B Chain B, Cytochrome Bc1 Complex From Bovine Length = 439 | Back alignment and structure |
| >pdb|1SQB|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin Length = 453 | Back alignment and structure |
| >pdb|1QCR|B Chain B, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex, Alpha Carbon Atoms Only Length = 423 | Back alignment and structure |
| >pdb|3CWB|B Chain B, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated Analogue Of The Polyketide Crocacin-d Length = 441 | Back alignment and structure |
| >pdb|1BCC|B Chain B, Cytochrome Bc1 Complex From Chicken Length = 422 | Back alignment and structure |
| >pdb|3BCC|B Chain B, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex From Chicken Length = 422 | Back alignment and structure |
| >pdb|3EOQ|A Chain A, The Crystal Structure Of Putative Zinc Protease Beta- Subunit From Thermus Thermophilus Hb8 Length = 406 | Back alignment and structure |
| >pdb|3AMJ|B Chain B, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 424 | Back alignment and structure |
| >pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 | Back alignment and structure |
| >pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 | Back alignment and structure |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 200/382 (52%), Positives = 274/382 (71%), Gaps = 1/382 (0%)
Query: 359 GTSKRSQTDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQA 418
GT R LE EVE++GAHLNAY++RE T +Y K L +D+PKAVE+LADI+QN L +
Sbjct: 66 GTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDS 125
Query: 419 EIERERGVILREMQEVETNLQEVVFDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDY 478
+IE+ER VIL+E+QE +T++++VVF++LHATAFQGTPL ++ GP++N++ L R DL +Y
Sbjct: 126 QIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEY 185
Query: 479 VNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGVVPPAHCRYTGSDVRVR 538
++ Y+ RMVL+ AGG++H L+ LA++HF + D V + CR+TGS + R
Sbjct: 186 LSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGL-SGTYDEDAVPTLSPCRFTGSQICHR 244
Query: 539 DDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQGFA 598
+D +PLAHVA+AVEG GW DN+ L VAN +IG +D + G G + +S LA+I A
Sbjct: 245 EDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLC 304
Query: 599 HSFQSFNTCYKDTGLWGVYFVADRMQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSN 658
SFQ+FN CY DTGL G +FV D M ++DM F +Q +W+RLC + T +EV R KNLL++
Sbjct: 305 QSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNA 364
Query: 659 LFLQLDGTTPVCEDIGRQILCYGRRVPLHELEARIDDVTAKDIHEVCTKYIWDRCPVVAA 718
L LDGTTPVCEDIGR +L YGRR+PL E E+RI +V A+ + EVC+KY +D+CP VA
Sbjct: 365 LVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAG 424
Query: 719 VGPTEQLPDYTWLRQSMYWIRF 740
GP EQLPDY +R M+W+RF
Sbjct: 425 FGPIEQLPDYNRIRSGMFWLRF 446
|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 | Back alignment and structure |
|---|
| >3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Length = 197 | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 740 | |||
| 1q2l_A | 939 | Protease III; hydrolase; 2.20A {Escherichia coli s | 100.0 | |
| 3cww_A | 990 | Insulysin, insulin-degrading enzyme, insulinase; A | 100.0 | |
| 1pp9_A | 446 | Ubiquinol-cytochrome C reductase complex core Pro | 100.0 | |
| 3eoq_A | 406 | Putative zinc protease; two similar domains of bet | 100.0 | |
| 3hdi_A | 421 | Processing protease; CAGE structure, M16B peptidas | 100.0 | |
| 1hr6_B | 443 | Beta-MPP, mitochondrial processing peptidase beta | 100.0 | |
| 2fge_A | 995 | Atprep2;, zinc metalloprotease (insulinase family) | 100.0 | |
| 1hr6_A | 475 | Alpha-MPP, mitochondrial processing peptidase alph | 100.0 | |
| 3cx5_A | 431 | Cytochrome B-C1 complex subunit 1, mitochondrial; | 100.0 | |
| 3ami_A | 445 | Zinc peptidase; alpha/beta, zinc binding, hydrolas | 100.0 | |
| 3gwb_A | 434 | Peptidase M16 inactive domain family protein; pept | 100.0 | |
| 1pp9_B | 439 | Ubiquinol-cytochrome C reductase complex core Pro | 100.0 | |
| 3amj_B | 424 | Zinc peptidase inactive subunit; alpha/beta, zinc | 100.0 | |
| 3s5m_A | 1193 | Falcilysin; M16 metalloprotease, peptidase, hydrol | 100.0 | |
| 3d3y_A | 425 | Uncharacterized protein; APC29635, conserved prote | 100.0 | |
| 1q2l_A | 939 | Protease III; hydrolase; 2.20A {Escherichia coli s | 100.0 | |
| 3go9_A | 492 | Insulinase family protease; IDP00573, structural g | 100.0 | |
| 2fge_A | 995 | Atprep2;, zinc metalloprotease (insulinase family) | 100.0 | |
| 3s5m_A | 1193 | Falcilysin; M16 metalloprotease, peptidase, hydrol | 100.0 | |
| 3cww_A | 990 | Insulysin, insulin-degrading enzyme, insulinase; A | 100.0 | |
| 3cx5_B | 352 | Cytochrome B-C1 complex subunit 2, mitochondrial; | 100.0 | |
| 3eoq_A | 406 | Putative zinc protease; two similar domains of bet | 99.94 | |
| 3hdi_A | 421 | Processing protease; CAGE structure, M16B peptidas | 99.93 | |
| 1pp9_A | 446 | Ubiquinol-cytochrome C reductase complex core Pro | 99.92 | |
| 3ami_A | 445 | Zinc peptidase; alpha/beta, zinc binding, hydrolas | 99.92 | |
| 1hr6_A | 475 | Alpha-MPP, mitochondrial processing peptidase alph | 99.91 | |
| 1hr6_B | 443 | Beta-MPP, mitochondrial processing peptidase beta | 99.9 | |
| 3amj_B | 424 | Zinc peptidase inactive subunit; alpha/beta, zinc | 99.87 | |
| 3gwb_A | 434 | Peptidase M16 inactive domain family protein; pept | 99.87 | |
| 3ih6_A | 197 | Putative zinc protease; bordetella pertussis toham | 99.87 | |
| 1pp9_B | 439 | Ubiquinol-cytochrome C reductase complex core Pro | 99.87 | |
| 3go9_A | 492 | Insulinase family protease; IDP00573, structural g | 99.84 | |
| 3cx5_A | 431 | Cytochrome B-C1 complex subunit 1, mitochondrial; | 99.83 | |
| 3d3y_A | 425 | Uncharacterized protein; APC29635, conserved prote | 99.72 | |
| 3cx5_B | 352 | Cytochrome B-C1 complex subunit 2, mitochondrial; | 99.46 | |
| 3ih6_A | 197 | Putative zinc protease; bordetella pertussis toham | 97.69 |
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-53 Score=498.97 Aligned_cols=685 Identities=11% Similarity=0.059 Sum_probs=466.2
Q ss_pred cCCCCCCcEEEEccCCCEEE-EecCCCCeEEEEEEEeccccCCCCCCCCHHHHHHHhhcccccCCCcc-------CCCCc
Q psy5653 15 KSVNVPSTQVTSIDNGLRVA-TEDSGAPTATVGIWIDAGSRYETDANNGVAHFLEHMAFKLVMGRGQI-------KPEYG 86 (740)
Q Consensus 15 ~~~~~~~~~~~~l~nGl~v~-~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~~eh~~f~gt~~~~~~-------~~~~~ 86 (740)
++.+.+.|++.+|+|||+|+ ++++..|.++++++|++||++||++.+|+|||||||+|+||++++.. ...|+
T Consensus 14 ~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~l~v~~Gs~~e~~~~~GlAH~lEHmlf~Gt~~~p~~~~~~~~l~~~Gg 93 (939)
T 1q2l_A 14 SDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGG 93 (939)
T ss_dssp CTTCCCEEEEEEETTSCEEEEEECTTCSSEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTC
T ss_pred CCCCCcceEEEEecCCCEEEEEECCCCCceEEEEEeCccCCCCCCCCCchHHHHHHHHccCCCCCCCcchHHHHHHHcCC
Confidence 56677789999999999999 88888999999999999999999999999999999999999988631 22367
Q ss_pred chhhhhhhhhh-----------------------hcccChhHHHHhhhhHHHHHHHHH------------HHHHHhhcCC
Q psy5653 87 PLLVELSEEQV-----------------------YMHIKPNEVRQRKKQRKIDNEVAD------------LKLKLAACTQ 131 (740)
Q Consensus 87 ~~~~~~~~~~~-----------------------~~~f~~~~~~~~~~~~~i~~e~~~------------~~~~~~~~~~ 131 (740)
..||+|..|.| +|.|+++++++|+. +|.+|++. +...+++.|+
T Consensus 94 ~~NA~T~~d~T~y~~~~~~~~l~~~L~~l~d~~~~p~f~~~~~~~Er~--~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p 171 (939)
T 1q2l_A 94 SHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERN--AVNAELTMARTRDGMRMAQVSAETINPAHP 171 (939)
T ss_dssp EEEEEECSSCEEEEEEECGGGHHHHHHHHHHHHHCBCCCSTTHHHHHH--HHHHHHHHHTTSHHHHHHHHHHHSSCTTSG
T ss_pred cceEEECCCcEEEEEEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHhccCCHHHHHHHHHHHhcCCCCC
Confidence 77777755555 36666699999999 99999765 2344566788
Q ss_pred CCccccccHHHHHH----hhHhhhhHHHhhhhccchH------------HHHHHHHHhccCCCCCcccccccccccCC--
Q psy5653 132 NGRNIVLSNREIRL----LRYLELTEEEKEKVKASYK------------VARKLEKLEGRNREGEEGEMLSLDSVISG-- 193 (740)
Q Consensus 132 ~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (740)
+++...|+...+.. ++..++..++..+|++... +.+++.+.|+.|+.+..............
T Consensus 172 ~~~~~~G~~~~l~~~~~~~~~~~l~~f~~~~Y~p~n~~l~v~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~ 251 (939)
T 1q2l_A 172 GSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQ 251 (939)
T ss_dssp GGSCCSCCHHHHSCBTTBCHHHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCCCCCSCSCCGGG
T ss_pred CccCCCCCHHHHhcCCCchHHHHHHHHHHhccCHhheEEEEEcCCCHHHHHHHHHHHhhhhccCCCCCCCCCCCCCCHHH
Confidence 99999999999988 8899999999999986443 56677889999875432211000000000
Q ss_pred C--C--CCCCCCCccCcccCCCCCCCch-hh--HHHHHHHhcc---chhhhhhHHHHHHHHHhhccccc-ccCCccchhh
Q psy5653 194 R--S--TPSDSGSCSGDIISPTEPLSLT-DS--MLLMDDILSD---SRLDQLDRIERIEAILTAENVAQ-IKPEYGPLLV 262 (740)
Q Consensus 194 ~--~--~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~il~~---s~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 262 (740)
. . ......+..+.++++.....+. +. +.++..+||+ ++|...++ +++.++...+.... .....+.+
T Consensus 252 ~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~s~L~~~L~-~~gl~~~~~a~~~~~~~~~~g~f-- 328 (939)
T 1q2l_A 252 KGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQ-KQGLVEGISANSDPIVNGNSGVL-- 328 (939)
T ss_dssp SSEEEEECCSSCCCEEEEEEEEECCGGGGGGCHHHHHHHHHHCCCTTSHHHHHH-HTTCEEEEEEEEESSTTSSEEEE--
T ss_pred cCEEEEEEeCCCCcEEEEEEEcCChHHhhhhCHHHHHHHHhcCCCCCcHHHHHH-HcCCchheeeccccccCCCceEE--
Confidence 0 0 0111234455555554444333 32 5778999986 57888886 45555544433210 01111111
Q ss_pred hhhccceeeeecCchhHHhhhhcccChhHHHHHHHHHHHhhhc-cCChhHHHHHhhhccceEEEec--------------
Q psy5653 263 ELSEEQVYMHIKPNEVRQRKKQRKIDNEDMTFSVQHEWIRLCK-TVTPAEVERAKNLLKSNLFLQL-------------- 327 (740)
Q Consensus 263 ~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~el~~~k~~l~~~~~~~~-------------- 327 (740)
.+.+.+.++.. .. .+++.+.+.++++++.. ++++.|+.+++..+...+.+..
T Consensus 329 -----~i~~~~~~~~~-~~-------~~~~~~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~ 395 (939)
T 1q2l_A 329 -----AISASLTDKGL-AN-------RDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADT 395 (939)
T ss_dssp -----EEEEEECHHHH-HT-------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHH
T ss_pred -----EEEEEEChhhh-hh-------HHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCChHHHHHHHHHH
Confidence 33344443211 11 35666666666666554 6777766665543322111000
Q ss_pred ------cCCC---Cce----------------------eccc--------------------------------------
Q psy5653 328 ------DGTT---PVC----------------------EDIG-------------------------------------- 338 (740)
Q Consensus 328 ------d~~~---~~~----------------------~~ig-------------------------------------- 338 (740)
+... ... ..+|
T Consensus 396 ~~~~~~~~~~~~~~~i~~vt~~~i~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (939)
T 1q2l_A 396 MIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIAL 475 (939)
T ss_dssp HTTSCGGGTTTTTTCCCCCCHHHHHHHHHHCSGGGCEEEEECTTCCCCEECTTTCCEEEEEECCHHHHHHHHHHHHTCCC
T ss_pred hhcCCHHHHhcCchhhhccCHHHHHHHHHhcCHHHcEEEEEcCCCCCCcccceeCCeeeeeeCCHHHHHHHhccCccccc
Confidence 0000 000 0000
Q ss_pred ----------------------------------ceecccCCccc---hhhHHH-hhccCCCCCh---------------
Q psy5653 339 ----------------------------------RQILCYGRRVP---LHELEA-RIDGTSKRSQ--------------- 365 (740)
Q Consensus 339 ----------------------------------~~~~~~~~~~~---~~~l~~-~~~gt~~~~~--------------- 365 (740)
..|........ ...+.. +..+....+.
T Consensus 476 ~~p~~n~~~~~~~~~~~~~~~~~~p~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~~~~~~~~~l~~~ll~~ 555 (939)
T 1q2l_A 476 SLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGL 555 (939)
T ss_dssp CCCCCCTTCCCCCCCCCCSSCCSSCEEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcCCCcCcccccCcCCCCCCEEEEECCCceEeecCCCccCCCCcEEEEEEEeCCcccCCHHHHHHHHHHHHHHHH
Confidence 00000000000 000000 0000000011
Q ss_pred --hHHHHHHHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh-hCCHHHHH
Q psy5653 366 --TDLELEVENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEV-ETNLQEVV 442 (740)
Q Consensus 366 --~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~-~~~p~~~~ 442 (740)
.++.+.....|++++++. .+++.++++|++++++.+|+++.+.+.+|.|++++|+++|+.+++.+.+. .++|...+
T Consensus 556 g~~~~~~~~~l~G~~~~~~~-~~g~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~l~~~~~~~p~~~a 634 (939)
T 1q2l_A 556 ALDQLSNQASVGGISFSTNA-NNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQA 634 (939)
T ss_dssp HHHHHHHHHHHTTEEEEEEE-SSEEEEEEEEESSSHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHHHHH
T ss_pred HHHHHhhHHHHcCcEEEEee-CCcEEEEEEcccHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhhhcChHHHH
Confidence 112223455688899999 99999999999999999999999999999999999999999999999876 55799999
Q ss_pred HHHHHHHhcCCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCCCCCCCC
Q psy5653 443 FDHLHATAFQGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPNVDCAGV 522 (740)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~~~~~~~ 522 (740)
...+...++++ + ++..++.+.|++++.+++++|++++|.+.+++++|+||++.+++.++++++++.|+....+....
T Consensus 635 ~~~l~~~l~~~--~-~~~~~~~~~l~~it~~~l~~f~~~~~~~~~~~~~vvGn~~~~~~~~l~~~~~~~l~~~~~~~~~~ 711 (939)
T 1q2l_A 635 IMPAQMLSQVP--Y-FSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRN 711 (939)
T ss_dssp HHHHHHTTSSS--C-CCHHHHHHHGGGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHHTCCCSCCCCC
T ss_pred HHHHHHHhcCC--C-CCHHHHHHHHhcCCHHHHHHHHHHHHhhheEEEEEEcCCCHHHHHHHHHHHHHHHccCCcccccc
Confidence 88888888865 2 45557889999999999999999999999999999999999999999999998887543211110
Q ss_pred CCCCCcccCCCe-eEEeCCCCCceeE-EEEeecCCCCCCChHHHHHHHHhhcCCCCCCCCCCCcccHHHHHHHhc-CCeE
Q psy5653 523 VPPAHCRYTGSD-VRVRDDAMPLAHV-ALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASRLAAITAEQ-GFAH 599 (740)
Q Consensus 523 ~~~~~~~~~~~~-~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~ll~~iL~~~~~~~~~~~~~~~~l~~~lR~~-gl~Y 599 (740)
... ....+.. .........++.+ .++++.+..+.++.+++.+|..++ +++||+.||++ |++|
T Consensus 712 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~-------------~s~lf~~LRek~gl~Y 776 (939)
T 1q2l_A 712 KDV--VVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIV-------------QPWFYNQLRTEEQLGY 776 (939)
T ss_dssp EEE--CCCSCEEEEEEECCSSSCEEEEEEEECSSCCHHHHHHHHHHHHHHH-------------HHHHTHHHHTSCCSSS
T ss_pred ceE--EeCCCceEEEecCCCCCCceeEEEEEecCCCCHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHhCc
Confidence 000 1111222 1222222235555 666665533334455556666665 79999999986 9999
Q ss_pred EEEeecccCCCCceEEEEEEe---CCCCHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Q psy5653 600 SFQSFNTCYKDTGLWGVYFVA---DRMQLEDMTFSVQHEWIRLCKTVTPAEVERAKNLLKSNLFLQLDGTTPVCEDIGRQ 676 (740)
Q Consensus 600 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~s~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
+|+++.....+..++.+.+++ +|+++.++++.+.+.++++.+++|++||+++|+.++.++....+++...+.++|..
T Consensus 777 ~v~s~~~~~~~~~g~~~~i~s~~~~p~~~~~~i~~~~~~~~~~~~~~t~~el~~~k~~l~~~~~~~~~s~~~~~~~~w~~ 856 (939)
T 1q2l_A 777 AVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKD 856 (939)
T ss_dssp CEEEEEEEETTEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHH
T ss_pred eeeeeEeecCCeeEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 999987644444454455554 57889999999999998887789999999999999999999999999999999988
Q ss_pred HHHhCCCCC-hHHHHHHHcccCHHHHHHHHHHhcc-CCCcE--EEEEcCCC------------CCCCHHHHHHHHh
Q psy5653 677 ILCYGRRVP-LHELEARIDDVTAKDIHEVCTKYIW-DRCPV--VAAVGPTE------------QLPDYTWLRQSMY 736 (740)
Q Consensus 677 ~~~~~~~~~-~~~~~~~i~~vT~edv~~~~~~~l~-~~~~~--~~v~g~~~------------~i~~~~~~~~~~~ 736 (740)
+..++..++ .+++.+.|++||++||++++++++. +.+.. ++++|+.. .|.|+.++++.+.
T Consensus 857 i~~~~~~~d~~~~~~~~i~~vT~~dv~~~a~~~l~~~~~~~l~v~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (939)
T 1q2l_A 857 FDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMP 932 (939)
T ss_dssp HHHTCTTCCHHHHHHHHHHTCCHHHHHHHHHHHTTSCSSEEEEEEECCSSHHHHCCCCCTTCEECSCHHHHHTTSC
T ss_pred HhcCCCCCChHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCEEEEEEecCCCCcccccccCCCcEeCCHHHHhhcCc
Confidence 887665555 4888999999999999999999875 44454 44888853 3567777776543
|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
| >3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* | Back alignment and structure |
|---|
| >3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 740 | ||||
| d3cx5a2 | 218 | d.185.1.1 (A:240-457) Cytochrome bc1 core subunit | 5e-61 | |
| d3cx5a2 | 218 | d.185.1.1 (A:240-457) Cytochrome bc1 core subunit | 2e-05 | |
| d1ppja2 | 209 | d.185.1.1 (A:234-442) Cytochrome bc1 core subunit | 4e-58 | |
| d1ppja2 | 209 | d.185.1.1 (A:234-442) Cytochrome bc1 core subunit | 8e-07 | |
| d1hr6b2 | 217 | d.185.1.1 (B:246-462) Mitochondrial processing pep | 1e-50 | |
| d1hr6b2 | 217 | d.185.1.1 (B:246-462) Mitochondrial processing pep | 6e-06 | |
| d1hr6a2 | 237 | d.185.1.1 (A:234-470) Mitochondrial processing pep | 8e-38 | |
| d1hr6a2 | 237 | d.185.1.1 (A:234-470) Mitochondrial processing pep | 3e-05 | |
| d1ppjb2 | 204 | d.185.1.1 (B:236-439) Cytochrome bc1 core subunit | 2e-37 | |
| d1ppjb2 | 204 | d.185.1.1 (B:236-439) Cytochrome bc1 core subunit | 0.004 | |
| d1ppja1 | 232 | d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 | 9e-20 | |
| d1ppja1 | 232 | d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 | 6e-19 | |
| d2fgea4 | 257 | d.185.1.1 (A:15-271) Presequence protease 1, PREP1 | 3e-18 | |
| d2fgea4 | 257 | d.185.1.1 (A:15-271) Presequence protease 1, PREP1 | 7e-05 | |
| d3cx5b2 | 150 | d.185.1.1 (B:219-368) Cytochrome bc1 core subunit | 7e-17 | |
| d1hr6b1 | 222 | d.185.1.1 (B:24-245) Mitochondrial processing pept | 8e-17 | |
| d1hr6b1 | 222 | d.185.1.1 (B:24-245) Mitochondrial processing pept | 2e-14 | |
| d3cx5a1 | 213 | d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 | 8e-17 | |
| d3cx5a1 | 213 | d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 | 2e-14 | |
| d1ppjb1 | 219 | d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 | 2e-16 | |
| d1ppjb1 | 219 | d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 | 4e-16 | |
| d3cx5b1 | 202 | d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 | 4e-15 | |
| d3cx5b1 | 202 | d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 | 5e-14 | |
| d1hr6a1 | 220 | d.185.1.1 (A:14-233) Mitochondrial processing pept | 1e-14 | |
| d1hr6a1 | 220 | d.185.1.1 (A:14-233) Mitochondrial processing pept | 3e-14 | |
| d1q2la1 | 229 | d.185.1.1 (A:504-732) Protease III {Escherichia co | 1e-14 | |
| d1q2la4 | 240 | d.185.1.1 (A:24-263) Protease III {Escherichia col | 1e-14 | |
| d1q2la4 | 240 | d.185.1.1 (A:24-263) Protease III {Escherichia col | 1e-09 |
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Cytochrome bc1 core subunit 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 202 bits (514), Expect = 5e-61
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 528 CRYTGSDVRVRDDAMPLAHVALAVEGCGWESADNIPLMVANTLIGAWDRSQGSGTNNASR 587
+ GS+VR+RDD +P A ++LAVEG S + +A + G+++ + + +
Sbjct: 3 AAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIK 62
Query: 588 LAAITAEQGFAHSFQSFNTCYKDTGLWGVYF-VADRMQLEDMTFSVQHEWIRLCKTVTPA 646
L E +F F+ YKD+GLWG + ++D+ +W RL +VT
Sbjct: 63 LLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDT 122
Query: 647 EVERAKNLLKSNLFLQLDGTTPVC--EDIGRQILCYGRRVPLHELEARIDDVTAKDIHEV 704
EVERAK+LLK L + PV +G ++L G ++ L E +ID +T KD+
Sbjct: 123 EVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAW 182
Query: 705 CTKYIWDRCPVVAAVGPTEQLPDYTWLRQSMYWIRF 740
K +WD+ +A G E L DY +R M +R+
Sbjct: 183 AGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 218
|
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 209 | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 209 | Back information, alignment and structure |
|---|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 217 | Back information, alignment and structure |
|---|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 217 | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237 | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237 | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 204 | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 204 | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 | Back information, alignment and structure |
|---|
| >d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 150 | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 740 | |||
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.96 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 99.95 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.94 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.93 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.93 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 99.92 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.92 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 99.91 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 99.9 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.89 | |
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 99.89 | |
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.88 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 99.85 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.82 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 99.77 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.77 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 99.76 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.74 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 99.74 | |
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 99.72 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 99.59 | |
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.54 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 99.46 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 98.33 | |
| d2fgea3 | 268 | Presequence protease 1, PREP1 {Thale cress (Arabid | 98.29 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 98.1 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 98.1 | |
| d1q2la3 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 98.09 | |
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 97.92 | |
| d3cx5b2 | 150 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 97.9 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 97.81 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 97.79 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 97.69 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 97.09 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 96.36 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 96.27 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 93.66 |
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Cytochrome bc1 core subunit 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=9e-28 Score=228.14 Aligned_cols=142 Identities=26% Similarity=0.462 Sum_probs=132.9
Q ss_pred HHHhcCeeeEEecceEEEEEEEecCCChHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhc
Q psy5653 372 VENIGAHLNAYTSREQTVFYAKCLKQDVPKAVEILADIIQNSKLGQAEIERERGVILREMQEVETNLQEVVFDHLHATAF 451 (740)
Q Consensus 372 l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~p~~~~~~~~~~~~~ 451 (740)
++..|+.++++++.+.+.|++++++++++.+++++.+++.+|.|++++++++|+.++.++....++|..++.+.++..+|
T Consensus 73 ~~~~G~~~n~~t~~d~t~~~~~~~~~~~~~~l~ll~~~l~~p~~~~~~~~~~~~~i~~e~~~~~~~p~~~~~~~l~~~~f 152 (219)
T d1ppjb1 73 IEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAY 152 (219)
T ss_dssp HHHTTCEEEEEECSSCEEEEEEEEGGGHHHHHHHHHHHHHCBCCCHHHHHHHTHHHHHHHHHHTTSHHHHHHHHHHHHHB
T ss_pred HHHhccchhhhhhhheeeeeeeeecchhHHHHHHHHHhccCCcchhhhhhhhhHHHHHHHHHHhhccchHHHHHHHhhcc
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChhhhccCCHHHHHHHHHhhccCCceEEEEEcCCCHHHHHHHHHHhhCCCCCCC
Q psy5653 452 QGTPLGNTILGPTQNIKSLQRQDLLDYVNAFYQPARMVLSGAGGVDHDTLVKLAKEHFGNVKPPN 516 (740)
Q Consensus 452 ~~~~~~~~~~~~~~~l~~it~e~l~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~~~~~l~~~~ 516 (740)
+ +|++++..|+.+.|++++.++|++||++||.|+||+++++| ++.+++.++++++|+ ++.+.
T Consensus 153 ~-~~~~~~~~g~~~~l~~it~~~l~~f~~~~y~p~n~~lv~~G-v~~~~l~~l~e~~~~-~~~g~ 214 (219)
T d1ppjb1 153 R-NALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLG-VSHPVLKQVAEQFLN-IRGGL 214 (219)
T ss_dssp S-SGGGSCSSCCGGGTTTCCHHHHHHHHHHHSCGGGEEEEEES-SCHHHHHHHHHHHCC-CCCCC
T ss_pred c-ccccCCCcCCHHHHhcCCHHHHHHHHHHhCCcccEEEEEEc-CCHHHHHHHHHHhcC-CCCCC
Confidence 7 48999999999999999999999999999999999999999 899999999999885 55543
|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|