Psyllid ID: psy5683
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| 332375274 | 288 | unknown [Dendroctonus ponderosae] | 0.977 | 0.895 | 0.505 | 3e-73 | |
| 307173208 | 331 | Fumarylacetoacetate hydrolase domain-con | 0.984 | 0.785 | 0.501 | 1e-72 | |
| 383851737 | 334 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.778 | 0.498 | 6e-72 | |
| 345491707 | 327 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.795 | 0.501 | 1e-71 | |
| 307203489 | 335 | Fumarylacetoacetate hydrolase domain-con | 0.984 | 0.776 | 0.487 | 3e-71 | |
| 66525858 | 334 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.778 | 0.494 | 3e-71 | |
| 380024366 | 334 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.778 | 0.494 | 4e-71 | |
| 340725890 | 334 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.778 | 0.472 | 1e-70 | |
| 350399972 | 334 | PREDICTED: fumarylacetoacetate hydrolase | 0.984 | 0.778 | 0.472 | 1e-70 | |
| 332029274 | 335 | Fumarylacetoacetate hydrolase domain-con | 0.977 | 0.770 | 0.494 | 3e-70 |
| >gi|332375274|gb|AEE62778.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 191/273 (69%), Gaps = 15/273 (5%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR+VQYK NG GN Q LG QL G+I+++SSVDSS+PNNLV+FL+ G EKA+R+
Sbjct: 1 MRYVQYKNKNG-GN--QYLGAQLSIGGDIVDISSVDSSIPNNLVEFLKLGQSTYEKARRI 57
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
+++ K + +++ LPP+T DK++C+ LNYK HCDEQ YP+ P FF+KF S +VGP
Sbjct: 58 IADSKSITPIADAIFLPPVTNGDKVVCVGLNYKGHCDEQKLAYPKEPMFFSKFSSVVVGP 117
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---------ESDWQKSSRN 171
F V P +T +DWEVELAV+IG++ + ++P + + +F DWQK SRN
Sbjct: 118 FDNVIIPP-ITNQVDWEVELAVVIGRQAKAIRPDQVQDHIFGYTVAQDISARDWQK-SRN 175
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
GQ+L KS+DTFCPLGP+VV + + DP D+ + VNG +KQ+ ++S ++ KI +VS
Sbjct: 176 NGQFLLGKSMDTFCPLGPAVVTRSKV-DPSDLAIKSWVNGVLKQSGNTSELIFKIDFLVS 234
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
YLS+++TL PGD+ILTGTPAGVGV R P E LK
Sbjct: 235 YLSQIVTLYPGDIILTGTPAGVGVHRNPQEFLK 267
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307173208|gb|EFN64270.1| Fumarylacetoacetate hydrolase domain-containing protein 2A [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|383851737|ref|XP_003701388.1| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|345491707|ref|XP_001608058.2| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|307203489|gb|EFN82540.1| Fumarylacetoacetate hydrolase domain-containing protein 2A [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|66525858|ref|XP_394112.2| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like isoform 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|380024366|ref|XP_003695971.1| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like isoform 1 [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|340725890|ref|XP_003401297.1| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|350399972|ref|XP_003485697.1| PREDICTED: fumarylacetoacetate hydrolase domain-containing protein 2A-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|332029274|gb|EGI69257.1| Fumarylacetoacetate hydrolase domain-containing protein 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| UNIPROTKB|F1SU52 | 313 | LOC100522130 "Uncharacterized | 0.981 | 0.827 | 0.450 | 1e-61 | |
| UNIPROTKB|E2RMW7 | 313 | LOC100856034 "Uncharacterized | 0.981 | 0.827 | 0.454 | 3.4e-61 | |
| UNIPROTKB|Q96GK7 | 314 | FAHD2A "Fumarylacetoacetate hy | 0.981 | 0.824 | 0.450 | 7.1e-61 | |
| UNIPROTKB|Q6P2I3 | 314 | FAHD2B "Fumarylacetoacetate hy | 0.981 | 0.824 | 0.443 | 1.3e-59 | |
| UNIPROTKB|F1MLX0 | 314 | FAHD2A "Uncharacterized protei | 0.981 | 0.824 | 0.432 | 4.5e-59 | |
| MGI|MGI:1915376 | 313 | Fahd2a "fumarylacetoacetate hy | 0.977 | 0.824 | 0.424 | 4.5e-59 | |
| RGD|1563674 | 313 | Fahd2a "fumarylacetoacetate hy | 0.977 | 0.824 | 0.413 | 7.3e-59 | |
| UNIPROTKB|Q2KIB0 | 314 | FAHD2 "Fumarylacetoacetate hyd | 0.981 | 0.824 | 0.428 | 9.3e-59 | |
| ZFIN|ZDB-GENE-040426-2499 | 291 | fahd2a "fumarylacetoacetate hy | 0.886 | 0.804 | 0.432 | 4.3e-54 | |
| FB|FBgn0038924 | 293 | CG6028 [Drosophila melanogaste | 0.973 | 0.877 | 0.439 | 1.1e-53 |
| UNIPROTKB|F1SU52 LOC100522130 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 123/273 (45%), Positives = 182/273 (66%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMPNNLVQFLEGGPELLEKAKRM 60
MR VQ++ + G P LG++ G +INLS+ D ++P +++FLE G L A+R
Sbjct: 26 MRLVQFQAPHLTG--PH-LGLESGNGGGVINLSAFDPTLPKTMLEFLEQGEAALSVARRA 82
Query: 61 VSECKCMVKLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGP 120
++ ++ SEV +L P+TRPDK++C+ +NY DHC EQN P+ P F+KF S+IVGP
Sbjct: 83 LAAQLPVLPRSEVTILAPVTRPDKVVCVGMNYMDHCREQNVPVPKEPIIFSKFGSSIVGP 142
Query: 121 FSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAM---------ESVFESDWQKSSRN 171
+ E+ P ++ +DWEVELAV+IGKK + +K +AM V DWQ + RN
Sbjct: 143 YDEIVLPPE-SQEVDWEVELAVVIGKKGKHIKAADAMAHVAGFTVAHDVSARDWQMT-RN 200
Query: 172 GGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVS 231
G QWL K+ DTFCPLGP++V K+ + DPH++ + C+VNG V Q+++++ M+ K E+++
Sbjct: 201 GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGNVVQSSNTNQMVFKTEELIA 260
Query: 232 YLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
++S +T+ PGD+ILTGTPAGVGVFRKP LK
Sbjct: 261 WVSRFVTVYPGDIILTGTPAGVGVFRKPPIFLK 293
|
|
| UNIPROTKB|E2RMW7 LOC100856034 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96GK7 FAHD2A "Fumarylacetoacetate hydrolase domain-containing protein 2A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6P2I3 FAHD2B "Fumarylacetoacetate hydrolase domain-containing protein 2B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MLX0 FAHD2A "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1915376 Fahd2a "fumarylacetoacetate hydrolase domain containing 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1563674 Fahd2a "fumarylacetoacetate hydrolase domain containing 2A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2KIB0 FAHD2 "Fumarylacetoacetate hydrolase domain-containing protein 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-2499 fahd2a "fumarylacetoacetate hydrolase domain containing 2A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0038924 CG6028 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| COG0179 | 266 | COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxo | 1e-76 | |
| pfam01557 | 207 | pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA | 1e-59 | |
| TIGR02303 | 245 | TIGR02303, HpaG-C-term, 4-hydroxyphenylacetate deg | 2e-44 | |
| PRK15203 | 429 | PRK15203, PRK15203, 4-hydroxyphenylacetate degrada | 2e-32 | |
| PRK10691 | 219 | PRK10691, PRK10691, hypothetical protein; Provisio | 3e-30 | |
| PRK12764 | 500 | PRK12764, PRK12764, hypothetical protein; Provisio | 2e-27 | |
| TIGR02305 | 205 | TIGR02305, HpaG-N-term, 4-hydroxyphenylacetate deg | 4e-26 | |
| PRK15203 | 429 | PRK15203, PRK15203, 4-hydroxyphenylacetate degrada | 1e-09 |
| >gnl|CDD|223257 COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 232 bits (595), Expect = 1e-76
Identities = 84/198 (42%), Positives = 125/198 (63%), Gaps = 13/198 (6%)
Query: 68 VKLSEVELLPPITRPDKILCIALNYKDHCDEQNKT--YPETPFFFNKFPSTIVGPFSEVT 125
+L+EV LL P+ P KI+C+ NY DH +E K PE P FF K P+ ++GP +
Sbjct: 45 GELAEVRLLAPLPPPGKIVCVGRNYADHAEEMGKDRDIPEEPVFFLKPPTAVIGPNDPIP 104
Query: 126 CPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---------ESDWQKSSRNGGQWL 176
P ++ LD+E ELAV+IGK+ +DV +A++ + D Q + G W
Sbjct: 105 LPPG-SKGLDYEGELAVVIGKRGKDVSVEDALDYIAGYTIGNDVTARDLQMEEK-GRPWT 162
Query: 177 FAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEM 236
AK DTF P+GP +V K+ ++DP ++ L+ +VNG+V+Q ++S+M+ IPE+++YLS
Sbjct: 163 RAKGFDTFAPVGPWIVTKDEISDPQNLPLSLRVNGEVRQRGNTSDMIFSIPELIAYLSRF 222
Query: 237 ITLLPGDVILTGTPAGVG 254
+TL PGDVILTGTP+GVG
Sbjct: 223 MTLEPGDVILTGTPSGVG 240
|
Length = 266 |
| >gnl|CDD|216570 pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA) hydrolase family | Back alignment and domain information |
|---|
| >gnl|CDD|131356 TIGR02303, HpaG-C-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit | Back alignment and domain information |
|---|
| >gnl|CDD|185125 PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182650 PRK10691, PRK10691, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237193 PRK12764, PRK12764, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131358 TIGR02305, HpaG-N-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit | Back alignment and domain information |
|---|
| >gnl|CDD|185125 PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| COG0179 | 266 | MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-en | 100.0 | |
| KOG1535|consensus | 217 | 100.0 | ||
| TIGR02303 | 245 | HpaG-C-term 4-hydroxyphenylacetate degradation bif | 100.0 | |
| PLN02856 | 424 | fumarylacetoacetase | 100.0 | |
| PRK10691 | 219 | hypothetical protein; Provisional | 100.0 | |
| PRK15203 | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| PRK15203 | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| TIGR01266 | 415 | fum_ac_acetase fumarylacetoacetase. This enzyme ca | 100.0 | |
| PRK12764 | 500 | hypothetical protein; Provisional | 100.0 | |
| TIGR02305 | 205 | HpaG-N-term 4-hydroxyphenylacetate degradation bif | 100.0 | |
| PF01557 | 218 | FAA_hydrolase: Fumarylacetoacetate (FAA) hydrolase | 100.0 | |
| TIGR03220 | 255 | catechol_dmpE 2-oxopent-4-enoate hydratase. Member | 99.9 | |
| PRK11342 | 262 | mhpD 2-keto-4-pentenoate hydratase; Provisional | 99.86 | |
| KOG2843|consensus | 420 | 99.75 | ||
| TIGR02312 | 267 | HpaH 2-oxo-hepta-3-ene-1,7-dioic acid hydratase. T | 99.71 | |
| COG3971 | 264 | 2-keto-4-pentenoate hydratase [Secondary metabolit | 99.46 | |
| TIGR03218 | 263 | catechol_dmpH 4-oxalocrotonate decarboxylase. Memb | 99.39 | |
| COG3970 | 379 | Fumarylacetoacetate (FAA) hydrolase family protein | 99.35 | |
| COG3802 | 333 | GguC Uncharacterized protein conserved in bacteria | 99.26 | |
| PF10370 | 50 | DUF2437: Domain of unknown function (DUF2437); Int | 97.85 | |
| PF11010 | 194 | DUF2848: Protein of unknown function (DUF2848); In | 97.35 | |
| PF09298 | 107 | FAA_hydrolase_N: Fumarylacetoacetase N-terminal; I | 93.71 |
| >COG0179 MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-60 Score=426.73 Aligned_cols=188 Identities=45% Similarity=0.843 Sum_probs=179.6
Q ss_pred CCCcEEcCCCccCCeEEEEecCcHHHHHHhCCC--CCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCC
Q psy5683 70 LSEVELLPPITRPDKILCIALNYKDHCDEQNKT--YPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKK 147 (264)
Q Consensus 70 ~~~v~ll~Pv~~p~ki~~~g~Ny~~h~~e~~~~--~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~ 147 (264)
+.++++++|+.+++||||+|+||.+|++|++.. .|++|.+|.|+++++++|+++|.+|+. +.++|||+||||||||+
T Consensus 47 ~~~~~~~~~~~~~~ki~cvG~NY~~Ha~E~~~~~~~p~~P~~F~K~~~a~~~~~~~i~~P~~-s~~~dyE~ELavvIGk~ 125 (266)
T COG0179 47 LAEVRLLAPLPPPGKIVCVGRNYADHAEEMGKDRDIPEEPVFFLKPPTAVIGPNDPIPLPPG-SKGLDYEGELAVVIGKR 125 (266)
T ss_pred ccccccccCCCCCCcEEEEechHHHHHHHhccCCCCCCCCeeeccCcccccCCCCceECCCC-CCCcceeEEEEEEECCc
Confidence 678999999998999999999999999999985 899999999999999999999999999 99999999999999999
Q ss_pred CCCCChhhHhhhhh---------hhhcccccccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecc
Q psy5683 148 TRDVKPHEAMESVF---------ESDWQKSSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNAS 218 (264)
Q Consensus 148 ~~~i~~~~A~~~i~---------ard~q~~~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~ 218 (264)
+++|++++|++||+ +||+|.. ..+.+|.+||+||+|||+|||+++.+|+.|+++|.|.++||||+||++|
T Consensus 126 ~~~v~~e~A~d~I~GYti~nD~T~Rd~Q~~-~~~~~w~~aK~~d~~~Pigp~iv~~~e~~d~~~l~l~~~vNGe~~Q~g~ 204 (266)
T COG0179 126 GKDVSVEDALDYIAGYTIGNDVTARDLQME-EKGRPWTRAKGFDTFAPVGPWIVTKDEISDPQNLPLSLRVNGEVRQRGN 204 (266)
T ss_pred CCCCCHHHHHhhheEEeeeeecchhcchhh-hhcCCcccccccCCCCCceeEEeccccCCCCccceEEEEECCEEEecCc
Confidence 99999999999999 9999942 3688999999999999999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCC
Q psy5683 219 SSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKP 259 (264)
Q Consensus 219 t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p 259 (264)
|++|+|+|++||+|+|++|||+|||||+||||+|||..+..
T Consensus 205 t~~Mi~~i~~lI~~lS~~~tL~pGDvI~TGTP~Gvg~l~~G 245 (266)
T COG0179 205 TSDMIFSIPELIAYLSRFMTLEPGDVILTGTPSGVGFLKPG 245 (266)
T ss_pred HHHcccCHHHHHHHHhCCcccCCCCEEEeCCCCCcccCCCC
Confidence 99999999999999999999999999999999999976654
|
|
| >KOG1535|consensus | Back alignment and domain information |
|---|
| >TIGR02303 HpaG-C-term 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit | Back alignment and domain information |
|---|
| >PLN02856 fumarylacetoacetase | Back alignment and domain information |
|---|
| >PRK10691 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK15203 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional | Back alignment and domain information |
|---|
| >PRK15203 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01266 fum_ac_acetase fumarylacetoacetase | Back alignment and domain information |
|---|
| >PRK12764 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02305 HpaG-N-term 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit | Back alignment and domain information |
|---|
| >PF01557 FAA_hydrolase: Fumarylacetoacetate (FAA) hydrolase family Mutations in Swiss:P16930 cause inherited tyrosinemia type I | Back alignment and domain information |
|---|
| >TIGR03220 catechol_dmpE 2-oxopent-4-enoate hydratase | Back alignment and domain information |
|---|
| >PRK11342 mhpD 2-keto-4-pentenoate hydratase; Provisional | Back alignment and domain information |
|---|
| >KOG2843|consensus | Back alignment and domain information |
|---|
| >TIGR02312 HpaH 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | Back alignment and domain information |
|---|
| >COG3971 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >TIGR03218 catechol_dmpH 4-oxalocrotonate decarboxylase | Back alignment and domain information |
|---|
| >COG3970 Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG3802 GguC Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF10370 DUF2437: Domain of unknown function (DUF2437); InterPro: IPR018833 This entry represents the N-terminal 50 amino acids of a group of bacterial proteins often annotated as fumarylacetoacetate hydrolase-containing enzymes | Back alignment and domain information |
|---|
| >PF11010 DUF2848: Protein of unknown function (DUF2848); InterPro: IPR021269 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
| >PF09298 FAA_hydrolase_N: Fumarylacetoacetase N-terminal; InterPro: IPR015377 Fumarylacetoacetase (3 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 264 | ||||
| 3qdf_A | 268 | Crystal Structure Of 2-Hydroxyhepta-2,4-Diene-1,7-D | 4e-34 | ||
| 3rr6_A | 265 | Structure Of A Putative Uncharacterized Protein Fro | 1e-32 | ||
| 1wzo_A | 246 | Crystal Structure Of The Hpce From Thermus Thermoph | 4e-29 | ||
| 2dfu_A | 264 | Crystal Structure Of The 2-Hydroxyhepta-2,4-Diene-1 | 6e-27 | ||
| 1i7o_A | 429 | Crystal Structure Of Hpce Length = 429 | 1e-26 | ||
| 1saw_A | 225 | X-Ray Structure Of Homo Sapiens Protein Flj36880 Le | 2e-26 | ||
| 4dbf_A | 288 | Crystal Structures Of Cg1458 Length = 288 | 2e-25 | ||
| 1nr9_A | 223 | Crystal Structure Of Escherichia Coli 1262 (Apc5008 | 1e-23 | ||
| 1nkq_A | 259 | Crystal Structure Of Yeast Ynq8, A Fumarylacetoacet | 4e-23 | ||
| 3v77_A | 224 | Crystal Structure Of A Putative Fumarylacetoacetate | 7e-21 | ||
| 3r6o_A | 329 | Crystal Structure Of A Probable 2-Hydroxyhepta-2,4- | 8e-20 | ||
| 3s52_A | 221 | Crystal Structure Of A Putative Fumarylacetoacetate | 3e-17 |
| >pdb|3QDF|A Chain A, Crystal Structure Of 2-Hydroxyhepta-2,4-Diene-1,7-Dioate Isomerase From Mycobacterium Marinum Length = 268 | Back alignment and structure |
|
| >pdb|3RR6|A Chain A, Structure Of A Putative Uncharacterized Protein From Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265 | Back alignment and structure |
| >pdb|1WZO|A Chain A, Crystal Structure Of The Hpce From Thermus Thermophilus Hb8 Length = 246 | Back alignment and structure |
| >pdb|2DFU|A Chain A, Crystal Structure Of The 2-Hydroxyhepta-2,4-Diene-1,7-Dioate Isomerase From Thermus Thermophilus Hb8 Length = 264 | Back alignment and structure |
| >pdb|1I7O|A Chain A, Crystal Structure Of Hpce Length = 429 | Back alignment and structure |
| >pdb|1SAW|A Chain A, X-Ray Structure Of Homo Sapiens Protein Flj36880 Length = 225 | Back alignment and structure |
| >pdb|4DBF|A Chain A, Crystal Structures Of Cg1458 Length = 288 | Back alignment and structure |
| >pdb|1NR9|A Chain A, Crystal Structure Of Escherichia Coli 1262 (Apc5008), Putative Isomerase Length = 223 | Back alignment and structure |
| >pdb|1NKQ|A Chain A, Crystal Structure Of Yeast Ynq8, A Fumarylacetoacetate Hydrolase Family Protein Length = 259 | Back alignment and structure |
| >pdb|3V77|A Chain A, Crystal Structure Of A Putative Fumarylacetoacetate IsomeraseHYDROLASE FROM OLEISPIRA ANTARCTICA Length = 224 | Back alignment and structure |
| >pdb|3R6O|A Chain A, Crystal Structure Of A Probable 2-Hydroxyhepta-2,4-Diene-1, 7- Dioateisomerase From Mycobacterium Abscessus Length = 329 | Back alignment and structure |
| >pdb|3S52|A Chain A, Crystal Structure Of A Putative Fumarylacetoacetate Hydrolase Family Protein From Yersinia Pestis Co92 Length = 221 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| 3r6o_A | 329 | 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssg | 1e-101 | |
| 1wzo_A | 246 | HPCE; structural genomics, riken structural genomi | 3e-91 | |
| 3rr6_A | 265 | Putative uncharacterized protein; structural genom | 2e-90 | |
| 2dfu_A | 264 | Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; | 1e-86 | |
| 1gtt_A | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 7e-86 | |
| 1gtt_A | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 2e-75 | |
| 1saw_A | 225 | Hypothetical protein FLJ36880; structural genomics | 2e-78 | |
| 3l53_A | 224 | Putative fumarylacetoacetate isomerase/hydrolase; | 7e-74 | |
| 2q18_X | 293 | 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-fami | 1e-73 | |
| 3s52_A | 221 | Putative fumarylacetoacetate hydrolase family Pro; | 1e-71 | |
| 1nkq_A | 259 | Hypothetical 28.8 kDa protein in PSD1-SKO1 interge | 5e-69 | |
| 3lzk_A | 359 | Fumarylacetoacetate hydrolase family protein; stru | 7e-60 | |
| 1hyo_A | 421 | Fumarylacetoacetate hydrolase; beta-sandwich roll; | 2e-26 |
| >3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus} Length = 329 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = e-101
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 26/283 (9%)
Query: 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSM---PNNLVQFLEGGPELLEKA 57
+R V + + + GV L + + L+ + + ++ + + P++
Sbjct: 24 LRIVSFAGADQ-----WQPGV-LIDDDTVAPLAPMLARHDIQVSSARELIALLPQISPLI 77
Query: 58 KRMVSECKCM-VKLSEVELLPPITRPDKILCIALNYKDHCD-EQNKTYPETPFFFNKFPS 115
++ V L V L PI P +++ + NY H D + P F K P+
Sbjct: 78 SDELAGGSFEPVPLDSVALGAPIPEPGQVIALGFNYPTHSDTDSPLPKMADPVVFMKSPT 137
Query: 116 TIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPHEAMESVF---------ESDWQ 166
+I GP V P LD+E+E+AV+IGK ++ +A++ V D
Sbjct: 138 SISGPRDAVIAPRTSHA-LDYEIEIAVVIGKPGYRIERSQAIKHVAGYMLANDITARDVA 196
Query: 167 K-----SSRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSN 221
S Q + K TFCP GP + ++NG+++Q+ S+ +
Sbjct: 197 LPFGFGGSPLQAQVVRGKGYPTFCPTGPWLFTTGSDTTFETFDFELRINGELRQSGSTVD 256
Query: 222 MLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264
M E+V +S I L GD+ILTGTP G G P L+
Sbjct: 257 MTLGFAEVVETVSATIALRAGDIILTGTPGGCGFQFDPPRYLR 299
|
| >1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus} Length = 246 | Back alignment and structure |
|---|
| >3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A Length = 265 | Back alignment and structure |
|---|
| >2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus} Length = 264 | Back alignment and structure |
|---|
| >1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Length = 429 | Back alignment and structure |
|---|
| >1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Length = 429 | Back alignment and structure |
|---|
| >1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1 Length = 225 | Back alignment and structure |
|---|
| >2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A Length = 293 | Back alignment and structure |
|---|
| >3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} PDB: 1nr9_A Length = 221 | Back alignment and structure |
|---|
| >1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1 Length = 259 | Back alignment and structure |
|---|
| >3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti} Length = 359 | Back alignment and structure |
|---|
| >1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A Length = 421 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| 3r6o_A | 329 | 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssg | 100.0 | |
| 4dbf_A | 288 | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxa | 100.0 | |
| 3rr6_A | 265 | Putative uncharacterized protein; structural genom | 100.0 | |
| 3lzk_A | 359 | Fumarylacetoacetate hydrolase family protein; stru | 100.0 | |
| 1wzo_A | 246 | HPCE; structural genomics, riken structural genomi | 100.0 | |
| 3l53_A | 224 | Putative fumarylacetoacetate isomerase/hydrolase; | 100.0 | |
| 2dfu_A | 264 | Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; | 100.0 | |
| 3s52_A | 221 | Putative fumarylacetoacetate hydrolase family Pro; | 100.0 | |
| 2q18_X | 293 | 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-fami | 100.0 | |
| 1gtt_A | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| 1saw_A | 225 | Hypothetical protein FLJ36880; structural genomics | 100.0 | |
| 1hyo_A | 421 | Fumarylacetoacetate hydrolase; beta-sandwich roll; | 100.0 | |
| 1nkq_A | 259 | Hypothetical 28.8 kDa protein in PSD1-SKO1 interge | 100.0 | |
| 1gtt_A | 429 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| 2wqt_A | 270 | 2-keto-4-pentenoate hydratase; lyase, dodecahedral | 100.0 | |
| 2eb4_A | 267 | 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60 | 100.0 |
| >3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-66 Score=471.42 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=206.9
Q ss_pred CeEEEEeeCCCCCCCCceEEEEEccCCEEEECCCCCCCCc---ccHHHHHhCCcHHHHHHHHHHhh-ccccccCCCcEEc
Q psy5683 1 MRFVQYKPLNGNGNTPQRLGVQLERNGEIINLSSVDSSMP---NNLVQFLEGGPELLEKAKRMVSE-CKCMVKLSEVELL 76 (264)
Q Consensus 1 Mrl~~~~~~~~~~~~~~~~gvv~~~~~~v~~l~~~~~~~p---~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~v~ll 76 (264)
|||+||...+ ..+.|++..+ +.++||+....... .....+++.+++....+++.+.. ....+++++++|+
T Consensus 24 ~~l~~~~~~~-----~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~~~l~~~ld~~~~~l~~~l~~~~~~~~~~~~v~ll 97 (329)
T 3r6o_A 24 LRIVSFAGAD-----QWQPGVLIDD-DTVAPLAPMLARHDIQVSSARELIALLPQISPLISDELAGGSFEPVPLDSVALG 97 (329)
T ss_dssp CEEEEBC---------CCEEEEEET-TEEEECSCC---------CHHHHHTTHHHHHHHHHHTC-------CBGGGSCBC
T ss_pred EEEEEEccCC-----CccceEEecC-CEEEEchhhhccccccccchhhHHHHHHHHHHHHHHHHhcCCCCCccCccceEc
Confidence 7899998764 3677877643 69999997643221 23444555554433334433332 2235799999999
Q ss_pred CCCccCCeEEEEecCcHHHHHHhCCCCCC--CCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCCCCCChh
Q psy5683 77 PPITRPDKILCIALNYKDHCDEQNKTYPE--TPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKTRDVKPH 154 (264)
Q Consensus 77 ~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~--~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~~~i~~~ 154 (264)
+|+++|+||||+|+||.+|++ ++.+.|+ +|++|+|+++++++++++|.+|.. +.++|||+||||||||.+++|+++
T Consensus 98 aPv~~p~kI~cvG~NY~~H~~-~g~~~P~~~~P~~F~K~~~s~~g~~~~I~~P~~-~~~~d~E~ELavVIGk~~~~v~~e 175 (329)
T 3r6o_A 98 APIPEPGQVIALGFNYPTHSD-TDSPLPKMADPVVFMKSPTSISGPRDAVIAPRT-SHALDYEIEIAVVIGKPGYRIERS 175 (329)
T ss_dssp CSSSSCSCEEEEESCSTTC------------CCEEEEECGGGEECTTCCEEECTT-CSCEECCEEEEEEECSCBSSCCGG
T ss_pred CCCCCCCeEEEEcccHHHHHH-hCCCCCCccCCEEEEcccceEECCCCceECCCC-CCCccEEEEEEEEECCCCCCCCHH
Confidence 999999999999999999999 8888898 999999999999999999999998 899999999999999999999999
Q ss_pred hHhhhhh---------hhhcccc-----cccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecccc
Q psy5683 155 EAMESVF---------ESDWQKS-----SRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSS 220 (264)
Q Consensus 155 ~A~~~i~---------ard~q~~-----~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~t~ 220 (264)
+|++||+ +||||.. +..+.+|.+||+||+|||+|||+||+||++|+.+|+|+++||||++|+++|+
T Consensus 176 ~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~~~~w~~aK~fd~~~plGP~ivt~del~d~~~l~l~l~vNGe~~q~g~t~ 255 (329)
T 3r6o_A 176 QAIKHVAGYMLANDITARDVALPFGFGGSPLQAQVVRGKGYPTFCPTGPWLFTTGSDTTFETFDFELRINGELRQSGSTV 255 (329)
T ss_dssp GGGGGEEEEEEEECCEEHHHHCTTC------CCCHHHHHCSTTSEEBCSCEEECTTCSSCCCCEEEEEETTEEEEEEEGG
T ss_pred HHHhhheEEEEEEEeEHHHHhhhhcccccccCCccccccCcCcCcccCCeEcChhhcCChhhcEEEEEECCEEEEecCHH
Confidence 9999999 8999761 0126789999999999999999999999999999999999999999999999
Q ss_pred ccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCCCCCC
Q psy5683 221 NMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPIESLK 264 (264)
Q Consensus 221 ~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~~~L~ 264 (264)
+|+|++++||+|+|+++||+|||||+||||+|||..++|++|||
T Consensus 256 dMif~~~~lIa~lS~~~tL~pGDvI~TGTp~GvG~~~~p~~~l~ 299 (329)
T 3r6o_A 256 DMTLGFAEVVETVSATIALRAGDIILTGTPGGCGFQFDPPRYLR 299 (329)
T ss_dssp GCSSCHHHHHHHHHTTSCBCTTCEEECCCCSCCGGGSSSCCCCC
T ss_pred HhcCCHHHHHHHHHcCCCcCCCCEEEcCCccccCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999986
|
| >4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A | Back alignment and structure |
|---|
| >3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A | Back alignment and structure |
|---|
| >3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A | Back alignment and structure |
|---|
| >2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A | Back alignment and structure |
|---|
| >1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A | Back alignment and structure |
|---|
| >1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1 | Back alignment and structure |
|---|
| >1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A | Back alignment and structure |
|---|
| >1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1 | Back alignment and structure |
|---|
| >1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A | Back alignment and structure |
|---|
| >2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A | Back alignment and structure |
|---|
| >2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 264 | ||||
| d1sawa_ | 217 | d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Hom | 5e-50 | |
| d1gtta2 | 216 | d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degra | 5e-43 | |
| d1nkqa_ | 257 | d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker | 5e-42 | |
| d1nr9a_ | 221 | d.177.1.1 (A:) Putative isomerase YcgM {Escherichi | 3e-38 | |
| d1hyoa2 | 298 | d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolas | 3e-29 | |
| d1gtta1 | 213 | d.177.1.1 (A:1-213) 4-hydroxyphenylacetate degrada | 1e-26 | |
| d1sv6a_ | 261 | d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD | 2e-12 |
| >d1sawa_ d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAH superfamily: FAH family: FAH domain: FAHD1 (Flj36880, YISKL) species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (409), Expect = 5e-50
Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 78 PITR----PDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRY 133
P++R I+C+ NY DH E P F K + S + P
Sbjct: 2 PLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRN- 60
Query: 134 LDWEVELAVIIGKKTRDVKPHEAME---------SVFESDWQ-KSSRNGGQWLFAKSLDT 183
L E+EL V++GK+ R V AM+ + D Q + + G W AKS
Sbjct: 61 LHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTA 120
Query: 184 FCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNASSSNMLHKIPEIVSYLSEMITLLPGD 243
CP+ V KE + DPH + L KVNG+++Q +S+M+ IP I+SY+S++ITL GD
Sbjct: 121 SCPVSA-FVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGD 179
Query: 244 VILTGTPAGVGVFRK 258
+ILTGTP GVG ++
Sbjct: 180 IILTGTPKGVGPVKE 194
|
| >d1gtta2 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} Length = 216 | Back information, alignment and structure |
|---|
| >d1nkqa_ d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 257 | Back information, alignment and structure |
|---|
| >d1nr9a_ d.177.1.1 (A:) Putative isomerase YcgM {Escherichia coli [TaxId: 562]} Length = 221 | Back information, alignment and structure |
|---|
| >d1hyoa2 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolase, FAH, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 298 | Back information, alignment and structure |
|---|
| >d1gtta1 d.177.1.1 (A:1-213) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} Length = 213 | Back information, alignment and structure |
|---|
| >d1sv6a_ d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD {Escherichia coli [TaxId: 562]} Length = 261 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| d1nr9a_ | 221 | Putative isomerase YcgM {Escherichia coli [TaxId: | 100.0 | |
| d1sawa_ | 217 | FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [Tax | 100.0 | |
| d1gtta2 | 216 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| d1gtta1 | 213 | 4-hydroxyphenylacetate degradation bifunctional is | 100.0 | |
| d1nkqa_ | 257 | Hypothetical protein Ynl168c {Baker's yeast (Sacch | 100.0 | |
| d1hyoa2 | 298 | Fumarylacetoacetate hydrolase, FAH, C-terminal dom | 100.0 | |
| d1sv6a_ | 261 | 2-keto-4-pentenoate hydratase MhpD {Escherichia co | 99.67 | |
| d1hyoa1 | 118 | Fumarylacetoacetate hydrolase, FAH, N-terminal dom | 95.7 |
| >d1nr9a_ d.177.1.1 (A:) Putative isomerase YcgM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAH superfamily: FAH family: FAH domain: Putative isomerase YcgM species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.5e-59 Score=402.77 Aligned_cols=188 Identities=32% Similarity=0.571 Sum_probs=164.7
Q ss_pred cCCCcEEcCCCccCCeEEEEecCcHHHHHHhCCCCCCCCEEEecCCCceecCCCeeecCCCCcCCceeeeEEEEEEcCCC
Q psy5683 69 KLSEVELLPPITRPDKILCIALNYKDHCDEQNKTYPETPFFFNKFPSTIVGPFSEVTCPTNVTRYLDWEVELAVIIGKKT 148 (264)
Q Consensus 69 ~~~~v~ll~Pv~~p~ki~~~g~Ny~~h~~e~~~~~p~~P~~F~K~~~s~~g~g~~I~~P~~~~~~~d~E~ELavVIgk~~ 148 (264)
.++...+..|+ +||+|+|+||++|++|++.+.|+.|.+|+|+++++++++++|.+|.. +..+|||+||++||||.+
T Consensus 7 ~~~g~~~~~Pv---~kI~cvg~NY~~H~~E~~~~~p~~P~~F~K~~~al~g~~~~I~~p~~-~~~ld~E~EL~vvigk~~ 82 (221)
T d1nr9a_ 7 NWQGALLDYPV---SKVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAIPSD-FGSVHHEVELAVLIGATL 82 (221)
T ss_dssp BTTSCBCSCCC---CCEEEESCCBC----------CCCCCEEEECGGGEEETTSCBCCCSS-SSCEEECEEEEEEECSCB
T ss_pred CCCCCcccCCC---ccEEEEeccHHHHHHHHCCCCCCCCEEEEECchhhcCCCcccccccc-cceeeecccEEEEecccc
Confidence 44445555666 69999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred CCCChhhHhhhhh---------hhhcccc-cccCCCceeccccCCCcccCCcccccccCCCCCceEEEEEECCEEEEecc
Q psy5683 149 RDVKPHEAMESVF---------ESDWQKS-SRNGGQWLFAKSLDTFCPLGPSVVMKEYLNDPHDVTLTCKVNGQVKQNAS 218 (264)
Q Consensus 149 ~~i~~~~A~~~i~---------ard~q~~-~~~~~~~~~~K~~d~~~plGP~ivt~de~~d~~~l~i~~~vNGe~~q~~~ 218 (264)
+++++++|++||+ +||+|.. +..+.+|.++|+||+|||+|||+++.+++.|+.+++|+++||||++|+++
T Consensus 83 ~~i~~~~A~~~I~Gyti~ND~T~Rd~q~~~~~~~~~~~~~K~~d~~~p~Gp~i~~~~~~~d~~~l~i~~~vNGe~~Q~~~ 162 (221)
T d1nr9a_ 83 RQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQGT 162 (221)
T ss_dssp SSCCHHHHHHHEEEEEEEECCBCHHHHHHHHHHTCCSHHHHSSTTCEEECCBEEGGGCCSCGGGCEEEEEETTEEEEEEE
T ss_pred ceeeccccchhhheeeeeeeeeeehhhhhhhhcccccccCcccCCccccceeeeeeeccCCCcccEEEEEECCEEEEecc
Confidence 9999999999999 8999862 34678999999999999999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHHHCCcccCCCCEEEcCCCCCCCCCCCCC
Q psy5683 219 SSNMLHKIPEIVSYLSEMITLLPGDVILTGTPAGVGVFRKPI 260 (264)
Q Consensus 219 t~~m~~~~~~lia~lS~~~tL~pGDvI~TGTp~Gvg~~~~p~ 260 (264)
|++|+|+++++|+|+|+++||+|||||+||||+|+|..+..+
T Consensus 163 t~~Mi~~~~elI~~lS~~~tL~pGDiI~TGTP~Gvg~l~~GD 204 (221)
T d1nr9a_ 163 TADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGD 204 (221)
T ss_dssp GGGBSSCHHHHHHHHTTTSCBCTTCEEECCCCSCCEEECTTC
T ss_pred cccccCCHHHHHHHHhCCCEECCCCEEEcCCCCCCccCCCCC
Confidence 999999999999999999999999999999999999766443
|
| >d1sawa_ d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1gtta2 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1gtta1 d.177.1.1 (A:1-213) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nkqa_ d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1hyoa2 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolase, FAH, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1sv6a_ d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1hyoa1 b.34.8.1 (A:1-118) Fumarylacetoacetate hydrolase, FAH, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|