Psyllid ID: psy581

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
SVPSILVGVGLIVVVGFIISAIQESKSKKKDKASRSSKKELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
ccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEEEcccEEEEEEEccccccccccccccEEEEEEEEccEEEEEEEccccccccccEEEEEEEEEEccccccccccccHHHHHHccccccEEEEEccccEEEEEcccEEEEccccccccccccEEcEEEEEEcccccccHHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHHccccEEEEEEEccccccccccEEEccHHHHHHHccccccccEEEEEcccccccccccccccHHHHHHHHHHcccccccccccccccccccccHHccccccccEEEc
cccHHHHHHHHHHcccccccccccHHHcccccccccccccccccccccccEEEEEEEEEEEEccEEEEEEEccccccEcccccccEEEEEEEEccEEEEEEEccccccccccEEEEEEEccccccccccccccHHHHHHHHcccccEEEEEEEEccEEEccccEEEEcccccccccEEEEccEEEEEEEHHHHHHHHHHHHHHHHccccccEEEEEEEEEEHHHcccHHHHHHHHHHcHHHEEEEEEEEEcccccccEEccccHHHHHHHcccccccEEEEEEccHHHHHHHHHHHccccccccEEcEccEEEEccccHHHHHcccHHHHHccccccccEEcc
SVPSILVGVGLIVVVGFIISAIQEskskkkdkasrsskkelktlvdpdvkvplklkekieinhdtrcfrfelpsaehvlglpigqhlslsatindefvaraytpvtsdehhgyMDLVVKVYFknvhpkfpdggkmsQFLEnmkvgepinvsgprgrlaylgngefhiravskkdpptnlkvtqlsmiaggtgitPMLQLVRHitkdptdntkMSLIFANQSEKDILLREELEEAaaknpdqfklwytvdrpedgwkystGFVSAEMIaehlfppspdnlvlmcgpprktvknnlkpedkKEMKTLFSEFNkmkihegpppminfackpnldklgyseklrfsy
SVPSILVGVGLIVVVGFIISaiqeskskkkdkasrsskkelktlvdpdvkvplklkekieinhdTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIravskkdpptnLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEaaaknpdqfklwYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRktvknnlkpedkKEMKTLFSEFNKMKIHEGPPPMINFackpnldklgyseklrfsy
SVPSilvgvglivvvgfiiSAIQEskskkkdkasrsskkELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDIllreeleeaaaKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
****ILVGVGLIVVVGFIISAI*************************DVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIR**********************************************LIFA******ILL************DQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMC**************************************INFACK****************
SVPSILVGVGLIVVVGFIISAIQE************************VKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFP*GGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
SVPSILVGVGLIVVVGFIISAIQ*****************LKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
*****L***GLIVVVGFII*AI*******************KTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SVPSILVGVGLIVVVGFIISAIQESKSKKKDKASRSSKKELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query343 2.2.26 [Sep-21-2011]
Q5PQA4296 NADH-cytochrome b5 reduct N/A N/A 0.848 0.983 0.545 2e-96
Q5BJ68304 NADH-cytochrome b5 reduct yes N/A 0.857 0.967 0.539 2e-95
Q6BCY4276 NADH-cytochrome b5 reduct yes N/A 0.798 0.992 0.542 5e-93
Q5ZHX7304 NADH-cytochrome b5 reduct yes N/A 0.778 0.878 0.554 5e-91
Q6AY12276 NADH-cytochrome b5 reduct yes N/A 0.793 0.985 0.526 5e-89
Q3MHW9305 NADH-cytochrome b5 reduct yes N/A 0.801 0.901 0.521 5e-89
Q9UHQ9305 NADH-cytochrome b5 reduct no N/A 0.854 0.960 0.486 1e-88
Q3KNK3276 NADH-cytochrome b5 reduct yes N/A 0.793 0.985 0.532 2e-88
Q9DB73305 NADH-cytochrome b5 reduct no N/A 0.801 0.901 0.514 2e-88
Q0P487309 NADH-cytochrome b5 reduct no N/A 0.880 0.977 0.504 7e-88
>sp|Q5PQA4|NB5R2_XENLA NADH-cytochrome b5 reductase 2 OS=Xenopus laevis GN=cyb5r2 PE=2 SV=1 Back     alignment and function desciption
 Score =  352 bits (903), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/339 (54%), Positives = 226/339 (66%), Gaps = 48/339 (14%)

Query: 6   LVGVGLIVVVGFIISAIQESKSKKKDKASRSSKKELKTLVDPDVKVPLKLKEKIEINHDT 65
           L  +G+ V++ F+I A+              +KK   TL+DP+ K PL L EK EI+HDT
Sbjct: 5   LAAIGVTVLL-FLIKAL-----------GSGAKKAPVTLLDPNAKYPLPLIEKQEISHDT 52

Query: 66  RCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKVYFKNV 125
           + FRF LPSAEHVLGLP+GQH+ LSA +N   V RAYTPV+SDE  G++DLVVKVY+KNV
Sbjct: 53  KKFRFGLPSAEHVLGLPVGQHIYLSAKVNGSLVVRAYTPVSSDEVKGHVDLVVKVYYKNV 112

Query: 126 HPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQ-L 184
           +PKFPDGGKMSQ L+++K+GE I+  GP G L Y G G+F IR   K +P   +KV + +
Sbjct: 113 NPKFPDGGKMSQHLDSLKIGETIDFRGPNGLLVYKGKGKFAIRPDKKAEP--KIKVAKHV 170

Query: 185 SMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKL 244
            M+AGGTGITPMLQL+R IT+DP DNTK  LIFANQ+E DILLR ELE  A  +P+QFKL
Sbjct: 171 GMLAGGTGITPMLQLIRQITQDPNDNTKCYLIFANQTEDDILLRYELETVAKSHPEQFKL 230

Query: 245 WYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKT 304
           WYT+DRP  GWKY +GFV+A+MI EHL PPS D LVLMC                     
Sbjct: 231 WYTLDRPPQGWKYGSGFVTADMIKEHLPPPSEDVLVLMC--------------------- 269

Query: 305 LFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY 343
                       GPPPMI FAC+ NL KLGY E  RF+Y
Sbjct: 270 ------------GPPPMIQFACQDNLTKLGYPEAGRFAY 296
NADH-cytochrome b5 reductases are involved in desaturation and elongation of fatty acids, cholesterol biosynthesis and drug metabolism.
Xenopus laevis (taxid: 8355)
EC: 1EC: .EC: 6EC: .EC: 2EC: .EC: 2
>sp|Q5BJ68|NB5R2_XENTR NADH-cytochrome b5 reductase 2 OS=Xenopus tropicalis GN=cyb5r2 PE=2 SV=1 Back     alignment and function description
>sp|Q6BCY4|NB5R2_HUMAN NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1 Back     alignment and function description
>sp|Q5ZHX7|NB5R2_CHICK NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1 Back     alignment and function description
>sp|Q6AY12|NB5R2_RAT NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus GN=Cyb5r2 PE=2 SV=1 Back     alignment and function description
>sp|Q3MHW9|NB5R1_BOVIN NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CYB5R1 PE=2 SV=1 Back     alignment and function description
>sp|Q9UHQ9|NB5R1_HUMAN NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=CYB5R1 PE=1 SV=1 Back     alignment and function description
>sp|Q3KNK3|NB5R2_MOUSE NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=Cyb5r2 PE=2 SV=2 Back     alignment and function description
>sp|Q9DB73|NB5R1_MOUSE NADH-cytochrome b5 reductase 1 OS=Mus musculus GN=Cyb5r1 PE=2 SV=1 Back     alignment and function description
>sp|Q0P487|NB5R2_DANRE NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=cyb5r2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
326320025309 NADH-cytochrome b5 reductase-like [Acyrt 0.880 0.977 0.574 1e-111
239788058309 ACYPI000600 [Acyrthosiphon pisum] 0.880 0.977 0.571 1e-110
332373828311 unknown [Dendroctonus ponderosae] 0.874 0.964 0.569 1e-105
321479226311 NADH-cytochrome b5 reductase 2 [Daphnia 0.880 0.971 0.557 1e-104
350398808314 PREDICTED: NADH-cytochrome b5 reductase 0.871 0.952 0.538 1e-100
340714895305 PREDICTED: NADH-cytochrome b5 reductase 0.871 0.980 0.535 1e-100
383852489315 PREDICTED: NADH-cytochrome b5 reductase 0.868 0.946 0.551 1e-100
156551868315 PREDICTED: NADH-cytochrome b5 reductase 0.865 0.942 0.539 1e-100
48128966313 PREDICTED: NADH-cytochrome b5 reductase 0.877 0.961 0.529 2e-99
308055648322 NADPH cytochrome b5 reductase [Helicover 0.787 0.838 0.592 3e-99
>gi|326320025|ref|NP_001191880.1| NADH-cytochrome b5 reductase-like [Acyrthosiphon pisum] gi|326320027|ref|NP_001191881.1| NADH-cytochrome b5 reductase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/343 (57%), Positives = 245/343 (71%), Gaps = 41/343 (11%)

Query: 1   SVPSILVGVGLIVVVGFIISAIQESKSKKKDKASRSSKKELKTLVDPDVKVPLKLKEKIE 60
           +V S+LVG+G++V  GF ISA   +  KK  K         +TLVD + K+PL L +K  
Sbjct: 8   TVSSVLVGLGIVVTTGFAISAFVANFQKKSQKK--------RTLVDSNTKIPLPLIQKHI 59

Query: 61  INHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVVKV 120
           I+HDTR FRFELPS  H+LGLPIGQH+ LSA IN+E VARAYTPV+SD   GYMDLV+KV
Sbjct: 60  ISHDTRRFRFELPSKNHILGLPIGQHIHLSARINEELVARAYTPVSSDNDVGYMDLVIKV 119

Query: 121 YFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLK 180
           YF++ +PKFPDGGK++Q+LE M++G+ I+V GP GRL Y G G+F I+AV + DP  NL 
Sbjct: 120 YFRDQNPKFPDGGKLTQYLEKMEIGDTIDVRGPSGRLIYHGRGDFEIKAVKRIDPSHNLY 179

Query: 181 VTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPD 240
             ++SMIAGGTGITPMLQL+R +T+DP D TK+SL+FANQ+E+DILLR+ELEEA   +PD
Sbjct: 180 AKKISMIAGGTGITPMLQLIRQVTRDPKDETKLSLLFANQTEEDILLRDELEEAVKSHPD 239

Query: 241 QFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKK 300
           + K+WYTVDRP DGWKYS GF+S++MI+EHL+PP+ D LVLMC                 
Sbjct: 240 RIKVWYTVDRPTDGWKYSVGFISSDMISEHLYPPAQDTLVLMC----------------- 282

Query: 301 EMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY 343
                           GPPPMINFAC PNLDKLGY  KLRFSY
Sbjct: 283 ----------------GPPPMINFACIPNLDKLGYDAKLRFSY 309

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|239788058|dbj|BAH70725.1| ACYPI000600 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|332373828|gb|AEE62055.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|321479226|gb|EFX90182.1| NADH-cytochrome b5 reductase 2 [Daphnia pulex] Back     alignment and taxonomy information
>gi|350398808|ref|XP_003485310.1| PREDICTED: NADH-cytochrome b5 reductase 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340714895|ref|XP_003395958.1| PREDICTED: NADH-cytochrome b5 reductase 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383852489|ref|XP_003701759.1| PREDICTED: NADH-cytochrome b5 reductase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|156551868|ref|XP_001601440.1| PREDICTED: NADH-cytochrome b5 reductase 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|48128966|ref|XP_396639.1| PREDICTED: NADH-cytochrome b5 reductase 2-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|308055648|gb|ADO08221.1| NADPH cytochrome b5 reductase [Helicoverpa armigera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
UNIPROTKB|F1P1W2304 CYB5R2 "NADH-cytochrome b5 red 0.708 0.799 0.590 3.5e-86
FB|FBgn0040512313 zetaCOP "zetaCOP" [Drosophila 0.714 0.782 0.574 7.2e-86
UNIPROTKB|Q6BCY4276 CYB5R2 "NADH-cytochrome b5 red 0.708 0.880 0.598 9.2e-86
UNIPROTKB|Q5ZHX7304 CYB5R2 "NADH-cytochrome b5 red 0.708 0.799 0.586 1.2e-85
UNIPROTKB|F1S4N2305 CYB5R1 "Uncharacterized protei 0.714 0.803 0.556 1.2e-83
UNIPROTKB|F1NZY9301 CYB5R3 "Uncharacterized protei 0.708 0.807 0.569 1.5e-83
ZFIN|ZDB-GENE-030131-8497304 cyb5r1 "cytochrome b5 reductas 0.714 0.805 0.565 1.5e-83
UNIPROTKB|E2RF18305 CYB5R1 "Uncharacterized protei 0.708 0.796 0.557 6.5e-83
FB|FBgn0036211316 CG5946 [Drosophila melanogaste 0.714 0.775 0.562 8.3e-83
UNIPROTKB|G5E5N5303 CYB5R1 "NADH-cytochrome b5 red 0.708 0.801 0.557 1.1e-82
UNIPROTKB|F1P1W2 CYB5R2 "NADH-cytochrome b5 reductase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 766 (274.7 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
 Identities = 144/244 (59%), Positives = 177/244 (72%)

Query:    43 TLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAY 102
             TL DP  K PL L  K EI+HDT+ FRF LPS +HVLGLP+GQH+ LSA IN   V RAY
Sbjct:    38 TLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAKINGNLVIRAY 97

Query:   103 TPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGN 162
             TPV+SDE  GY+DL++KVY+KNV+PKFP+GGKMSQ+L++MK+G+ I+  GP G L Y G+
Sbjct:    98 TPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGS 157

Query:   163 GEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSE 222
             G F I+   KK          L MIAGGTGITPMLQL+RHIT DP D+TK  L+FANQ+E
Sbjct:   158 GTFMIKP-DKKSEAQRKFAKHLGMIAGGTGITPMLQLIRHITSDPKDSTKCYLLFANQTE 216

Query:   223 KDIXXXXXXXXXXXKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLM 282
             KDI           ++PDQ +LWYT+DRP   WKYS+GFV+A+MI  HL PP  + L+LM
Sbjct:   217 KDILLRAELEDIAKRHPDQVRLWYTLDRPPQDWKYSSGFVTADMIKTHLPPPGSETLILM 276

Query:   283 CGPP 286
             CGPP
Sbjct:   277 CGPP 280
GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA
GO:0005739 "mitochondrion" evidence=IEA
GO:0016020 "membrane" evidence=IEA
FB|FBgn0040512 zetaCOP "zetaCOP" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q6BCY4 CYB5R2 "NADH-cytochrome b5 reductase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZHX7 CYB5R2 "NADH-cytochrome b5 reductase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1S4N2 CYB5R1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZY9 CYB5R3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-8497 cyb5r1 "cytochrome b5 reductase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RF18 CYB5R1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0036211 CG5946 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|G5E5N5 CYB5R1 "NADH-cytochrome b5 reductase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5ZHX7NB5R2_CHICK1, ., 6, ., 2, ., 20.55480.77840.8782yesN/A
Q54NC1NCB5R_DICDI1, ., 6, ., 2, ., 20.41190.74340.8916yesN/A
Q9DB73NB5R1_MOUSE1, ., 6, ., 2, ., 20.51450.80170.9016noN/A
Q3MHW9NB5R1_BOVIN1, ., 6, ., 2, ., 20.52100.80170.9016yesN/A
Q0P487NB5R2_DANRE1, ., 6, ., 2, ., 20.50440.88040.9773noN/A
Q6AY12NB5R2_RAT1, ., 6, ., 2, ., 20.52610.79300.9855yesN/A
Q6BUX2NCB5R_DEBHA1, ., 6, ., 2, ., 20.41370.60050.7253yesN/A
Q3KNK3NB5R2_MOUSE1, ., 6, ., 2, ., 20.53260.79300.9855yesN/A
Q6BCY4NB5R2_HUMAN1, ., 6, ., 2, ., 20.54220.79880.9927yesN/A
Q5BJ68NB5R2_XENTR1, ., 6, ., 2, ., 20.53930.85710.9671yesN/A
Q5PQA4NB5R2_XENLA1, ., 6, ., 2, ., 20.54570.84830.9831N/AN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.6.20.963
4th Layer1.6.2.20.946

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
PLN02252888 PLN02252, PLN02252, nitrate reductase [NADPH] 1e-115
cd06183234 cd06183, cyt_b5_reduct_like, Cytochrome b5 reducta 1e-107
PTZ00319300 PTZ00319, PTZ00319, NADH-cytochrome B5 reductase; 3e-99
cd00322223 cd00322, FNR_like, Ferredoxin reductase (FNR), an 2e-37
pfam0097099 pfam00970, FAD_binding_6, Oxidoreductase FAD-bindi 8e-37
PTZ00274325 PTZ00274, PTZ00274, cytochrome b5 reductase; Provi 2e-35
pfam00175106 pfam00175, NAD_binding_1, Oxidoreductase NAD-bindi 7e-34
COG0543252 COG0543, UbiB, 2-polyprenylphenol hydroxylase and 5e-32
cd06214241 cd06214, PA_degradation_oxidoreductase_like, NAD(P 6e-31
cd06217235 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur bi 3e-30
cd06215231 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur bi 2e-28
PTZ003061167 PTZ00306, PTZ00306, NADH-dependent fumarate reduct 3e-26
COG1018266 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NA 5e-21
cd06216243 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur bi 1e-20
cd06196218 cd06196, FNR_like_1, Ferredoxin reductase-like pro 5e-20
cd06191231 cd06191, FNR_iron_sulfur_binding, Iron-sulfur bind 7e-19
cd06221253 cd06221, sulfite_reductase_like, Anaerobic sulfite 3e-18
cd06184247 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P) 8e-18
cd06190232 cd06190, T4MO_e_transfer_like, Toluene-4-monoxygen 2e-17
cd06188283 cd06188, NADH_quinone_reductase, Na+-translocating 4e-17
cd06187224 cd06187, O2ase_reductase_like, The oxygenase reduc 2e-16
cd06209228 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reduc 3e-16
PRK08221263 PRK08221, PRK08221, anaerobic sulfite reductase su 9e-16
cd06210236 cd06210, MMO_FAD_NAD_binding, Methane monooxygenas 1e-15
TIGR01941405 TIGR01941, nqrF, NADH:ubiquinone oxidoreductase, N 3e-15
cd06212232 cd06212, monooxygenase_like, The oxygenase reducta 4e-15
cd06189224 cd06189, flavin_oxioreductase, NAD(P)H dependent f 8e-15
cd06198216 cd06198, FNR_like_3, NAD(P) binding domain of ferr 2e-14
COG2871410 COG2871, NqrF, Na+-transporting NADH:ubiquinone ox 3e-14
cd06195241 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase i 3e-13
cd06194222 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulf 2e-12
cd06218246 cd06218, DHOD_e_trans, FAD/NAD binding domain in t 3e-12
TIGR02160352 TIGR02160, PA_CoA_Oxy5, phenylacetate-CoA oxygenas 1e-11
cd06211238 cd06211, phenol_2-monooxygenase_like, Phenol 2-mon 3e-11
PRK13289399 PRK13289, PRK13289, bifunctional nitric oxide diox 5e-11
TIGR02911261 TIGR02911, sulfite_red_B, sulfite reductase, subun 1e-10
cd06208286 cd06208, CYPOR_like_FNR, These ferredoxin reductas 2e-10
PRK05464409 PRK05464, PRK05464, Na(+)-translocating NADH-quino 2e-10
PRK07609339 PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucosee 3e-09
PRK00054250 PRK00054, PRK00054, dihydroorotate dehydrogenase e 7e-08
COG4097438 COG4097, COG4097, Predicted ferric reductase [Inor 3e-07
cd06220233 cd06220, DHOD_e_trans_like2, FAD/NAD binding domai 1e-06
cd06213227 cd06213, oxygenase_e_transfer_subunit, The oxygena 2e-06
PRK11872340 PRK11872, antC, anthranilate dioxygenase reductase 3e-06
PLN03116307 PLN03116, PLN03116, ferredoxin--NADP+ reductase; P 1e-05
PLN03115367 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; 1e-05
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 1e-05
cd06192243 cd06192, DHOD_e_trans_like, FAD/NAD binding domain 1e-05
PRK08345289 PRK08345, PRK08345, cytochrome-c3 hydrogenase subu 3e-05
cd06197220 cd06197, FNR_like_2, FAD/NAD(P) binding domain of 7e-05
cd06185211 cd06185, PDR_like, Phthalate dioxygenase reductase 1e-04
COG0369587 COG0369, CysJ, Sulfite reductase, alpha subunit (f 0.002
cd06207382 cd06207, CyPoR_like, NADPH cytochrome p450 reducta 0.002
PRK10684332 PRK10684, PRK10684, HCP oxidoreductase, NADH-depen 0.003
>gnl|CDD|215141 PLN02252, PLN02252, nitrate reductase [NADPH] Back     alignment and domain information 
 Score =  354 bits (911), Expect = e-115
 Identities = 138/301 (45%), Positives = 191/301 (63%), Gaps = 41/301 (13%)

Query: 44  LVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYT 103
            ++P  K+P +L EKI ++HD R FRF LPS +HVLGLP+G+H+ L ATIN +   RAYT
Sbjct: 628 ALNPREKIPCRLVEKISLSHDVRLFRFALPSEDHVLGLPVGKHVFLCATINGKLCMRAYT 687

Query: 104 PVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNG 163
           P +SD+  G+ +LV+KVYFKNVHPKFP+GG MSQ+L+++ +G+ I+V GP G + Y G G
Sbjct: 688 PTSSDDEVGHFELVIKVYFKNVHPKFPNGGLMSQYLDSLPIGDTIDVKGPLGHIEYAGRG 747

Query: 164 EFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEK 223
            F    V+ K         +L+M+AGGTGITPM Q+++ I +DP D T+MSL++AN++E 
Sbjct: 748 SF---LVNGKPKF----AKKLAMLAGGTGITPMYQVIQAILRDPEDKTEMSLVYANRTED 800

Query: 224 DILLREELEEAAAKNPDQFKLWYTVDRP-EDGWKYSTGFVSAEMIAEHLFPPSPDNLVLM 282
           DILLREEL+  AA++PD+ K+WY V +   +GWKYS G V+  M+ EHL     + L LM
Sbjct: 801 DILLREELDRWAAEHPDRLKVWYVVSQVKREGWKYSVGRVTEAMLREHLPEGGDETLALM 860

Query: 283 CGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFS 342
           C                                 GPPPMI FAC+PNL+K+GY +     
Sbjct: 861 C---------------------------------GPPPMIEFACQPNLEKMGYDKDSILV 887

Query: 343 Y 343
           +
Sbjct: 888 F 888

Length = 888
>gnl|CDD|99780 cd06183, cyt_b5_reduct_like, Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>gnl|CDD|173521 PTZ00319, PTZ00319, NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>gnl|CDD|216220 pfam00970, FAD_binding_6, Oxidoreductase FAD-binding domain Back     alignment and domain information
>gnl|CDD|140300 PTZ00274, PTZ00274, cytochrome b5 reductase; Provisional Back     alignment and domain information
>gnl|CDD|215769 pfam00175, NAD_binding_1, Oxidoreductase NAD-binding domain Back     alignment and domain information
>gnl|CDD|223617 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99810 cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>gnl|CDD|99813 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99811 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|140327 PTZ00306, PTZ00306, NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>gnl|CDD|223949 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99793 cd06196, FNR_like_1, Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>gnl|CDD|99788 cd06191, FNR_iron_sulfur_binding, Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99817 cd06221, sulfite_reductase_like, Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>gnl|CDD|99781 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>gnl|CDD|99787 cd06190, T4MO_e_transfer_like, Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>gnl|CDD|99785 cd06188, NADH_quinone_reductase, Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>gnl|CDD|99784 cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>gnl|CDD|99805 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>gnl|CDD|181300 PRK08221, PRK08221, anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|99806 cd06210, MMO_FAD_NAD_binding, Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>gnl|CDD|130996 TIGR01941, nqrF, NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>gnl|CDD|99808 cd06212, monooxygenase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>gnl|CDD|99786 cd06189, flavin_oxioreductase, NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>gnl|CDD|99795 cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>gnl|CDD|225426 COG2871, NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99792 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>gnl|CDD|99791 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99814 cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>gnl|CDD|131215 TIGR02160, PA_CoA_Oxy5, phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>gnl|CDD|99807 cd06211, phenol_2-monooxygenase_like, Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>gnl|CDD|237337 PRK13289, PRK13289, bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>gnl|CDD|131957 TIGR02911, sulfite_red_B, sulfite reductase, subunit B Back     alignment and domain information
>gnl|CDD|99804 cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>gnl|CDD|235481 PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|181058 PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>gnl|CDD|234601 PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>gnl|CDD|226582 COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99816 cd06220, DHOD_e_trans_like2, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>gnl|CDD|99809 cd06213, oxygenase_e_transfer_subunit, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>gnl|CDD|183350 PRK11872, antC, anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215586 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>gnl|CDD|215585 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99789 cd06192, DHOD_e_trans_like, FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>gnl|CDD|236247 PRK08345, PRK08345, cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>gnl|CDD|99794 cd06197, FNR_like_2, FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>gnl|CDD|99782 cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>gnl|CDD|223446 COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99803 cd06207, CyPoR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|236735 PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 343
KOG0534|consensus286 100.0
PTZ00319300 NADH-cytochrome B5 reductase; Provisional 100.0
PLN02252888 nitrate reductase [NADPH] 100.0
cd06183234 cyt_b5_reduct_like Cytochrome b5 reductase catalyz 100.0
PTZ00274325 cytochrome b5 reductase; Provisional 100.0
cd06188283 NADH_quinone_reductase Na+-translocating NADH:quin 100.0
PRK11872340 antC anthranilate dioxygenase reductase; Provision 100.0
cd06217235 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr 100.0
cd06215231 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr 100.0
cd06211238 phenol_2-monooxygenase_like Phenol 2-monooxygenase 100.0
cd06210236 MMO_FAD_NAD_binding Methane monooxygenase (MMO) re 100.0
cd06184247 flavohem_like_fad_nad_binding FAD_NAD(P)H binding 100.0
cd06209228 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD 100.0
TIGR02160 352 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, 100.0
cd06189224 flavin_oxioreductase NAD(P)H dependent flavin oxid 100.0
cd06216243 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr 100.0
PRK10684332 HCP oxidoreductase, NADH-dependent; Provisional 100.0
cd06191231 FNR_iron_sulfur_binding Iron-sulfur binding Ferred 100.0
cd06213227 oxygenase_e_transfer_subunit The oxygenase reducta 100.0
COG1018266 Hmp Flavodoxin reductases (ferredoxin-NADPH reduct 100.0
cd06214241 PA_degradation_oxidoreductase_like NAD(P) binding 100.0
cd06195241 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c 100.0
PRK13289399 bifunctional nitric oxide dioxygenase/dihydropteri 100.0
PRK07609339 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat 100.0
cd06212232 monooxygenase_like The oxygenase reductase FAD/NAD 100.0
PRK08051232 fre FMN reductase; Validated 100.0
cd00322223 FNR_like Ferredoxin reductase (FNR), an FAD and NA 100.0
PRK08345289 cytochrome-c3 hydrogenase subunit gamma; Provision 100.0
cd06196218 FNR_like_1 Ferredoxin reductase-like proteins cata 100.0
cd06187224 O2ase_reductase_like The oxygenase reductase FAD/N 100.0
PRK10926248 ferredoxin-NADP reductase; Provisional 100.0
PRK05464409 Na(+)-translocating NADH-quinone reductase subunit 100.0
PTZ003061167 NADH-dependent fumarate reductase; Provisional 100.0
cd06190232 T4MO_e_transfer_like Toluene-4-monoxygenase electr 100.0
cd06194222 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding 100.0
TIGR01941405 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo 100.0
cd06221253 sulfite_reductase_like Anaerobic sulfite reductase 100.0
PLN03116307 ferredoxin--NADP+ reductase; Provisional 100.0
PRK05713312 hypothetical protein; Provisional 100.0
PRK08221263 anaerobic sulfite reductase subunit B; Provisional 100.0
cd06198216 FNR_like_3 NAD(P) binding domain of ferredoxin red 100.0
cd06208286 CYPOR_like_FNR These ferredoxin reductases are rel 100.0
TIGR02911261 sulfite_red_B sulfite reductase, subunit B. Member 100.0
PLN03115367 ferredoxin--NADP(+) reductase; Provisional 100.0
cd06185211 PDR_like Phthalate dioxygenase reductase (PDR) is 99.98
COG0543252 UbiB 2-polyprenylphenol hydroxylase and related fl 99.98
cd06218246 DHOD_e_trans FAD/NAD binding domain in the electro 99.97
cd06219248 DHOD_e_trans_like1 FAD/NAD binding domain in the e 99.97
cd06201289 SiR_like2 Cytochrome p450- like alpha subunits of 99.97
PRK06222281 ferredoxin-NADP(+) reductase subunit alpha; Review 99.97
cd06192243 DHOD_e_trans_like FAD/NAD binding domain (electron 99.97
PRK05802320 hypothetical protein; Provisional 99.97
PRK00054250 dihydroorotate dehydrogenase electron transfer sub 99.97
TIGR03224411 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p 99.97
COG4097438 Predicted ferric reductase [Inorganic ion transpor 99.97
cd06200245 SiR_like1 Cytochrome p450- like alpha subunits of 99.96
cd06220233 DHOD_e_trans_like2 FAD/NAD binding domain in the e 99.96
cd06193235 siderophore_interacting Siderophore interacting pr 99.96
COG2871410 NqrF Na+-transporting NADH:ubiquinone oxidoreducta 99.96
cd06197220 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin 99.96
cd06182267 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) 99.96
PRK12778 752 putative bifunctional 2-polyprenylphenol hydroxyla 99.94
PRK12779944 putative bifunctional glutamate synthase subunit b 99.94
cd06186210 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz 99.93
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.92
PLN02292702 ferric-chelate reductase 99.92
cd06207382 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) 99.91
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 99.9
TIGR01931597 cysJ sulfite reductase [NADPH] flavoprotein, alpha 99.9
cd06206384 bifunctional_CYPOR These bifunctional proteins fus 99.89
cd06204416 CYPOR NADPH cytochrome p450 reductase (CYPOR) serv 99.88
cd06203398 methionine_synthase_red Human methionine synthase 99.87
cd06202406 Nitric_oxide_synthase The ferredoxin-reductase (FN 99.86
PRK10953600 cysJ sulfite reductase subunit alpha; Provisional 99.86
PLN02631 699 ferric-chelate reductase 99.85
PLN02844 722 oxidoreductase/ferric-chelate reductase 99.85
PRK06214530 sulfite reductase; Provisional 99.85
KOG3378|consensus385 99.83
PF0097099 FAD_binding_6: Oxidoreductase FAD-binding domain; 99.82
COG0369587 CysJ Sulfite reductase, alpha subunit (flavoprotei 99.8
PF00175109 NAD_binding_1: Oxidoreductase NAD-binding domain ; 99.75
KOG1158|consensus645 99.69
KOG0039|consensus646 99.68
KOG1159|consensus574 99.56
COG2375265 ViuB Siderophore-interacting protein [Inorganic io 99.52
PRK065671028 putative bifunctional glutamate synthase subunit b 99.47
PF08030156 NAD_binding_6: Ferric reductase NAD binding domain 99.3
PF08021117 FAD_binding_9: Siderophore-interacting FAD-binding 99.0
PF08022105 FAD_binding_8: FAD-binding domain; InterPro: IPR01 98.96
PF04954119 SIP: Siderophore-interacting protein; InterPro: IP 96.08
PF00667219 FAD_binding_1: FAD binding domain; InterPro: IPR00 80.53
>KOG0534|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.6e-45  Score=336.97  Aligned_cols=246  Identities=57%  Similarity=0.987  Sum_probs=229.7

Q ss_pred             cccccccCCCceEeEEEEEEEEeCCCEEEEEEECCCCCccCCCCCCCEEEEEEeeCCeeeeeeceeccCCCCCCeEEEEE
Q psy581           39 KELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLVV  118 (343)
Q Consensus        39 ~~~~~~~~p~~~~~~~v~~~~~i~~~~~~l~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~yTi~s~~~~~~~l~~~V  118 (343)
                      ...+...+|..++++++++++.+++++..++|.++...+.+.+..|||+.+.++.++....|+|||.+.+.+.|+++|.|
T Consensus        40 ~~~~~~~~~~~~~~~~l~~k~~~shdt~~f~f~lp~~~~~l~lp~g~hv~~~~~i~g~~vvRpYTPvs~~~~~g~~~l~V  119 (286)
T KOG0534|consen   40 TGKKTLVDPESYYPFRLIDKTELSHDTSLFRFVLPSADHVLGLPIGQHVVLKAPIGGKLVVRPYTPVSLDDDKGYFDLVV  119 (286)
T ss_pred             cCcccccCCcceEEEEEEEEEeccCCceeEEEecCCchhccCcccceEEEEEecCCCcEEEEecCCccCccccceEEEEE
Confidence            45577889989999999999999999999999999888889999999999999999999999999999998889999999


Q ss_pred             EEEeecCCCCCCCCCccchhhhcCCCCCeEEEecCccceeecCCCceeeccCCCCCCCCCCCcceEEEEEcCcchHhHHH
Q psy581          119 KVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQ  198 (343)
Q Consensus       119 k~~~~~~~~~~~~~G~~S~~L~~l~~G~~V~v~GP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vv~iA~GtGIap~~s  198 (343)
                      |.|         .+|.||+||+++++||+|+++||.|++        .+++         ...+++.|||||||||||+|
T Consensus       120 K~Y---------~~G~mS~~l~~LkiGd~ve~rGP~G~~--------~~~~---------~~~~~l~miAgGtGItPmlq  173 (286)
T KOG0534|consen  120 KVY---------PKGKMSQHLDSLKIGDTVEFRGPIGEF--------KYDP---------QKAKHLGMIAGGTGITPMLQ  173 (286)
T ss_pred             Eec---------cCCcccHHHhcCCCCCEEEEecCccce--------EecC---------CCcceEEEEecccchhhHHH
Confidence            999         889999999999999999999999954        4443         13689999999999999999


Q ss_pred             HHHHHHhCCCCCccEEEEEecCCchhhhhHHHHHHHHHhCCCcEEEEEEecCCCCCCcccccccCHHHHHhhcCCCCC-C
Q psy581          199 LVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSP-D  277 (343)
Q Consensus       199 ll~~~~~~~~~~~~v~li~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~  277 (343)
                      ++++++.++.+.++++++|+|++.+|+++++||+.++.++|++|.++++++.+...|.+..|++++++|.+++..+.+ .
T Consensus       174 ii~~il~~~~d~tki~lly~N~te~DILlr~eL~~la~~~p~rf~~~y~v~~~~~~w~~~~g~It~~~i~~~l~~~~~~~  253 (286)
T KOG0534|consen  174 LIRAILKDPEDTTKISLLYANKTEDDILLREELEELASKYPERFKVWYVVDQPPEIWDGSVGFITKDLIKEHLPPPKEGE  253 (286)
T ss_pred             HHHHHhcCCCCCcEEEEEEecCCccccchHHHHHHHHhhCcceEEEEEEEcCCcccccCccCccCHHHHHhhCCCCCCCC
Confidence            999999988678899999999999999999999999999999999999999999999999999999999999988766 6


Q ss_pred             cEEEEeCCCccccccccCCCCcccceeeeeccccccccCCCCcchhhhhhhhHhhCCCCCCceEeC
Q psy581          278 NLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY  343 (343)
Q Consensus       278 ~~i~vCGp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~i~~~  343 (343)
                      +.+++|||                                 |+|++.++..+|+++||++++||+|
T Consensus       254 ~~~liCGP---------------------------------p~m~~~~~~~~le~Lg~~~~~vf~f  286 (286)
T KOG0534|consen  254 TLVLICGP---------------------------------PPMINGAAQGNLEKLGYNEDQVFVF  286 (286)
T ss_pred             eEEEEECC---------------------------------HHHHhHHHHHHHHhcCCChHhEEeC
Confidence            99999999                                 9999978999999999999999986

>PTZ00319 NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>PTZ00274 cytochrome b5 reductase; Provisional Back     alignment and domain information
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>PRK11872 antC anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information
>cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>PRK08051 fre FMN reductase; Validated Back     alignment and domain information
>cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>PRK10926 ferredoxin-NADP reductase; Provisional Back     alignment and domain information
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>PLN03116 ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>PRK05713 hypothetical protein; Provisional Back     alignment and domain information
>PRK08221 anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>TIGR02911 sulfite_red_B sulfite reductase, subunit B Back     alignment and domain information
>PLN03115 ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed Back     alignment and domain information
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>PRK05802 hypothetical protein; Provisional Back     alignment and domain information
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family Back     alignment and domain information
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PLN02292 ferric-chelate reductase Back     alignment and domain information
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>PLN02631 ferric-chelate reductase Back     alignment and domain information
>PLN02844 oxidoreductase/ferric-chelate reductase Back     alignment and domain information
>PRK06214 sulfite reductase; Provisional Back     alignment and domain information
>KOG3378|consensus Back     alignment and domain information
>PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain Back     alignment and domain information
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes Back     alignment and domain information
>KOG1158|consensus Back     alignment and domain information
>KOG0039|consensus Back     alignment and domain information
>KOG1159|consensus Back     alignment and domain information
>COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins Back     alignment and domain information
>PF08021 FAD_binding_9: Siderophore-interacting FAD-binding domain; InterPro: IPR013113 Proteins in this entry are siderophore-interacting FAD-binding proteins Back     alignment and domain information
>PF08022 FAD_binding_8: FAD-binding domain; InterPro: IPR013112 This FAD binding domain is associated with ferric reductase NAD binding proteins and the heavy chain of Cytochrome b-245 Back     alignment and domain information
>PF04954 SIP: Siderophore-interacting protein; InterPro: IPR007037 This entry includes the vibriobactin utilization protein viuB, which is involved in the removal of iron from iron-vibriobactin complexes, as well as several hypothetical proteins Back     alignment and domain information
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
1ndh_A272 Crystal Structure Of Nadh-Cytochrome B5 Reductase F 3e-80
1ib0_A274 Crystal Structure Of Rat B5r In Complex With Fad An 3e-80
1qx4_A274 Structrue Of S127p Mutant Of Cytochrome B5 Reductas 2e-79
1umk_A275 The Structure Of Human Erythrocyte Nadh-Cytochrome 1e-77
1cnf_A270 Structural Studies On Corn Nitrate Reductase: Refin 4e-60
1cne_A270 Structural Studies On Corn Nitrate Reductase: Refin 6e-59
2eix_A243 The Structure Of Physarum Polycephalum Cytochrome B 3e-49
2bmw_A304 Ferredoxin: Nadp+reductase Mutant With Thr 155 Repl 3e-05
1h42_A304 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 2e-04
2vyq_A304 Ferredoxin:nadp Reductase Mutant With Thr 155 Repla 2e-04
1ogi_A303 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 2e-04
2b5o_A402 Ferredoxin-nadp Reductase Length = 402 4e-04
>pdb|1NDH|A Chain A, Crystal Structure Of Nadh-Cytochrome B5 Reductase From Pig Liver At 2.4 Angstroms Resolution Length = 272 Back     alignment and structure 
Iteration: 1

 Score =  295 bits (755), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/301 (49%), Positives = 192/301 (63%), Gaps = 34/301 (11%)
Query: 43  TLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAY 102
           TL +PD+K PL+L +K  +NHDTR FRF LPS EH+LGLP+GQH+ LSA I+   V R Y
Sbjct: 6   TLENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPY 65
Query: 103 TPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGN 162
           TPV+SD+  G++DLV+KVYFK+ HPKFP GGKMSQ+LE+MK+G+ I   GP G L Y G 
Sbjct: 66  TPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGK 125
Query: 163 GEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSE 222
           G+F IR   KK  P    V  + MIAGGTGITPMLQ++R I KDP D+T   L+FANQ+E
Sbjct: 126 GKFAIRP-DKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE 184
Query: 223 KDIXXXXXXXXXXXKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLM 282
           KDI           ++  +FKLWYTVDR  + W YS GFV+ EMI +HL PP  + LVLM
Sbjct: 185 KDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLM 244
Query: 283 CGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFS 342
           C                                 GPPPMI +AC PNL+++G+ ++  F+
Sbjct: 245 C---------------------------------GPPPMIQYACLPNLERVGHPKERCFA 271
Query: 343 Y 343
           +
Sbjct: 272 F 272
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad Length = 274 Back     alignment and structure
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase Length = 274 Back     alignment and structure
>pdb|1UMK|A Chain A, The Structure Of Human Erythrocyte Nadh-Cytochrome B5 Reductase Length = 275 Back     alignment and structure
>pdb|1CNF|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined Structure Of The Cytochrome B Reductase Fragment At 2.5 Angstroms, Its Adp Complex And An Active Site Mutant And Modeling Of The Cytochrome B Domain Length = 270 Back     alignment and structure
>pdb|1CNE|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined Structure Of The Cytochrome B Reductase Fragment At 2.5 Angstroms, Its Adp Complex And An Active Site Mutant And Modeling Of The Cytochrome B Domain Length = 270 Back     alignment and structure
>pdb|2EIX|A Chain A, The Structure Of Physarum Polycephalum Cytochrome B5 Reductase Length = 243 Back     alignment and structure
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro, Arg 264 Replaced By Pro And Gly 265 Replaced By Pro (T155g- A160t-L263p-R264p-G265p) Length = 304 Back     alignment and structure
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro (T155g-A160t-L263p) Length = 304 Back     alignment and structure
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s) Length = 304 Back     alignment and structure
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly And Ala 160 Replaced By Thr (T155g-A160t) Length = 303 Back     alignment and structure
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase Length = 402 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 1e-126
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 1e-115
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 1e-114
1tvc_A250 Methane monooxygenase component C, methane monooxy 2e-43
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 5e-33
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 5e-33
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 6e-32
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 1e-29
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 7e-29
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 7e-28
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 9e-28
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 1e-26
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 2e-25
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 2e-21
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 7e-18
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 1e-13
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 5e-13
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 2e-12
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 1e-10
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 4e-10
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 9e-09
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 2e-08
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 2e-08
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
2gpj_A252 Siderophore-interacting protein; structural genomi 7e-05
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Length = 275 Back     alignment and structure
 Score =  361 bits (929), Expect = e-126
 Identities = 153/307 (49%), Positives = 194/307 (63%), Gaps = 34/307 (11%)

Query: 37  SKKELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDE 96
                 TL  PD+K PL+L ++  I+HDTR FRF LPS +H+LGLP+GQH+ LSA I+  
Sbjct: 3   RSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGN 62

Query: 97  FVARAYTPVTSDEHHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGR 156
            V R YTP++SD+  G++DLV+KVYFK+ HPKFP GGKMSQ+LE+M++G+ I   GP G 
Sbjct: 63  LVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGL 122

Query: 157 LAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLI 216
           L Y G G+F IR   KK  P    V  + MIAGGTGITPMLQ++R I KDP D+T   L+
Sbjct: 123 LVYQGKGKFAIRP-DKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLL 181

Query: 217 FANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSP 276
           FANQ+EKDILLR ELEE   K+  +FKLWYT+DR  + W Y  GFV+ EMI +HL PP  
Sbjct: 182 FANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEE 241

Query: 277 DNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYS 336
           + LVLMC                                 GPPPMI +AC PNLD +G+ 
Sbjct: 242 EPLVLMC---------------------------------GPPPMIQYACLPNLDHVGHP 268

Query: 337 EKLRFSY 343
            +  F +
Sbjct: 269 TERCFVF 275
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Length = 243 Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Length = 270 Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Length = 250 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Length = 248 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Length = 290 Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Length = 243 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Length = 257 Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Length = 271 Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Length = 272 Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Length = 262 Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Length = 142 Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 321 Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Length = 158 Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Length = 304 Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Length = 316 Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Length = 314 Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Length = 311 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Length = 314 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Length = 252 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 100.0
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 100.0
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 100.0
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 100.0
1tvc_A250 Methane monooxygenase component C, methane monooxy 100.0
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 100.0
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 100.0
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 100.0
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 100.0
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 100.0
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 100.0
4g1v_A399 Flavohemoglobin; three domains: globin fold, antip 100.0
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 100.0
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 100.0
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 100.0
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 100.0
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 100.0
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 100.0
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 100.0
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 100.0
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 100.0
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 100.0
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 100.0
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 99.97
2gpj_A252 Siderophore-interacting protein; structural genomi 99.97
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 99.94
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 99.89
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 99.89
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 99.87
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 99.87
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 99.87
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 99.86
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 99.86
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 99.82
3a1f_A186 Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi 99.8
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 99.78
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-43  Score=326.13  Aligned_cols=272  Identities=56%  Similarity=1.019  Sum_probs=229.6

Q ss_pred             ccccccccCCCceEeEEEEEEEEeCCCEEEEEEECCCCCccCCCCCCCEEEEEEeeCCeeeeeeceeccCCCCCCeEEEE
Q psy581           38 KKELKTLVDPDVKVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDEHHGYMDLV  117 (343)
Q Consensus        38 ~~~~~~~~~p~~~~~~~v~~~~~i~~~~~~l~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~yTi~s~~~~~~~l~~~  117 (343)
                      +...+.+++|..+++++|++++.+++++++|+|+.+.......|.||||+.|.++.++....|+|||++.+.+.+.++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~l~   83 (275)
T 1umk_A            4 STPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLV   83 (275)
T ss_dssp             -CCCBSCCCTTCCEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTTCCSEEEEE
T ss_pred             cCCCccccCCCccEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccCCCCeEEEE
Confidence            34556889999999999999999999999999998765455789999999999988888899999999998777899999


Q ss_pred             EEEEeecCCCCCCCCCccchhhhcCCCCCeEEEecCccceeecCCCceeeccCCCCCCCCCCCcceEEEEEcCcchHhHH
Q psy581          118 VKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLGNGEFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPML  197 (343)
Q Consensus       118 Vk~~~~~~~~~~~~~G~~S~~L~~l~~G~~V~v~GP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vv~iA~GtGIap~~  197 (343)
                      ||++.+..++.++++|.+|+||+++++||+|.|+||+|.+.++++|.|.++. +...+.+....++++||||||||||++
T Consensus        84 vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~~~~f~l~~-~~~~~~~~~~~~~~vliagGtGIaP~~  162 (275)
T 1umk_A           84 IKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRP-DKKSNPIIRTVKSVGMIAGGTGITPML  162 (275)
T ss_dssp             EECCCSSSBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEEEEETTEEEECS-STTSCCEEEECSEEEEEEEGGGHHHHH
T ss_pred             EEEeccCcccccCCCChhHHHHhcCCCCCEEEEEcCccceEecCCccccccc-cccccccccCCceEEEEecCccHhHHH
Confidence            9987555556666789999999999999999999999988777776677753 100000111368899999999999999


Q ss_pred             HHHHHHHhCCCCCccEEEEEecCCchhhhhHHHHHHHHHhCCCcEEEEEEecCCCCCCcccccccCHHHHHhhcCCCCCC
Q psy581          198 QLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFKLWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPD  277 (343)
Q Consensus       198 sll~~~~~~~~~~~~v~li~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~  277 (343)
                      ++++++........+++|+|++|+.++++|.+||+++.++++++++++++.+++..+|.+..|+++++.+.+.+.....+
T Consensus       163 ~~l~~l~~~~~~~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~~~~~~  242 (275)
T 1umk_A          163 QVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEE  242 (275)
T ss_dssp             HHHHHHHTCTTCCCEEEEEEEESSGGGCTTHHHHHHHHHHCTTTEEEEEEESSCCSSCSSEESSCCHHHHHHHSCCGGGC
T ss_pred             HHHHHHHhCCCCCcEEEEEEEcCCHHHhhHHHHHHHHHHhCcCcEEEEEEEcCCCccccCccCccCHHHHHHhcCCCCCC
Confidence            99999987532457899999999999999999999999988867999999888777788889999987777766543357


Q ss_pred             cEEEEeCCCccccccccCCCCcccceeeeeccccccccCCCCcchhhhhhhhHhhCCCCCCceEeC
Q psy581          278 NLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMINFACKPNLDKLGYSEKLRFSY  343 (343)
Q Consensus       278 ~~i~vCGp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~i~~~  343 (343)
                      ..+|+|||                                 ++|++.+++..|.++|+++++|++|
T Consensus       243 ~~vyvCGp---------------------------------~~m~~~~v~~~L~~~G~~~~~I~~f  275 (275)
T 1umk_A          243 PLVLMCGP---------------------------------PPMIQYACLPNLDHVGHPTERCFVF  275 (275)
T ss_dssp             CEEEEESC---------------------------------HHHHHHTTHHHHHHHTCCGGGEEEC
T ss_pred             eEEEEECC---------------------------------HHHHHHHHHHHHHHcCCCHHHEEeC
Confidence            89999999                                 9999966788999999999999987
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A* Back     alignment and structure
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Back     alignment and structure
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Back     alignment and structure
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 343
d2cnda1114 b.43.4.2 (A:11-124) Nitrate reductase core domain 5e-34
d1umka1124 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human 8e-32
d1umka2147 c.25.1.1 (A:154-300) cytochrome b5 reductase {Huma 3e-30
d2cnda2146 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea 2e-23
d1cqxa2111 b.43.4.2 (A:151-261) Flavohemoglobin, central doma 2e-18
d1jb9a2154 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodo 2e-17
d2bmwa2162 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodo 5e-17
d1gvha2107 b.43.4.2 (A:147-253) Flavohemoglobin, central doma 4e-15
d1fnda2160 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodo 6e-14
d1cqxa3142 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal d 1e-13
d1ep3b2160 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase 1e-12
d2piaa1103 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase 1e-12
d1qfja2135 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase 2e-12
d1ddga2153 c.25.1.4 (A:447-599) Sulfite reductase flavoprotei 1e-11
d1krha1100 b.43.4.2 (A:106-205) Benzoate dioxygenase reductas 1e-11
d2piaa2120 c.25.1.2 (A:104-223) Phthalate dioxygenase reducta 2e-11
d1gvha3143 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal d 3e-11
d1fdra2148 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodo 6e-11
d1tvca1109 b.43.4.2 (A:2-110) Methane monooxygenase component 1e-10
d1f20a2165 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synth 7e-10
d1a8pa2158 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodo 1e-09
d1krha2133 c.25.1.2 (A:206-338) Benzoate dioxygenase reductas 2e-09
d1a8pa199 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxi 3e-09
d1tvca2141 c.25.1.2 (A:111-251) Methane monooxygenase compone 4e-09
d1ja1a3160 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reducta 9e-09
d1fdra199 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxi 1e-08
d1ep3b1101 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, 1e-08
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 2e-08
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 2e-07
d1qfja197 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {E 9e-07
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Length = 114 Back     information, alignment and structure

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Ferredoxin reductase FAD-binding domain-like
domain: Nitrate reductase core domain
species: Corn (Zea mays) [TaxId: 4577]

 Score =  119 bits (299), Expect = 5e-34
 Identities = 56/112 (50%), Positives = 78/112 (69%)

Query: 50  KVPLKLKEKIEINHDTRCFRFELPSAEHVLGLPIGQHLSLSATINDEFVARAYTPVTSDE 109
           ++  +L  K E++ D R FRF LPS + VLGLPIG+H+ + ATI  +   RAYTP +  +
Sbjct: 2   RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVD 61

Query: 110 HHGYMDLVVKVYFKNVHPKFPDGGKMSQFLENMKVGEPINVSGPRGRLAYLG 161
             G+ DL+VKVYFKN HPKFP+GG M+Q+L+++ VG  I+V GP G + Y G
Sbjct: 62  EIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTG 113
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Length = 146 Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 111 Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 154 Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 162 Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Length = 107 Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 160 Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 142 Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 160 Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Length = 103 Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 135 Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 100 Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Length = 120 Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 109 Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 165 Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Length = 158 Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 133 Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Length = 99 Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 141 Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 101 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
d1umka2147 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.95
d1tvca2141 Methane monooxygenase component C, MmoC {Methyloco 99.9
d2cnda2146 Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} 99.88
d1krha2133 Benzoate dioxygenase reductase {Acinetobacter sp. 99.88
d1qfja2135 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.87
d1umka1124 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.86
d2cnda1114 Nitrate reductase core domain {Corn (Zea mays) [Ta 99.84
d1gvha3143 Flavohemoglobin, C-terminal domain {Escherichia co 99.83
d1cqxa3142 Flavohemoglobin, C-terminal domain {Alcaligenes eu 99.82
d1fdra199 Ferredoxin reductase (flavodoxin reductase) N-term 99.77
d2piaa2120 Phthalate dioxygenase reductase {Pseudomonas cepac 99.76
d1fdra2148 Ferredoxin reductase (flavodoxin reductase) {Esche 99.75
d1a8pa199 Ferredoxin reductase (flavodoxin reductase) N-term 99.75
d1cqxa2111 Flavohemoglobin, central domain {Alcaligenes eutro 99.73
d1gvha2107 Flavohemoglobin, central domain {Escherichia coli 99.72
d1fnda2160 Ferredoxin reductase (flavodoxin reductase) {Spina 99.71
d2bmwa2162 Ferredoxin reductase (flavodoxin reductase) {Cyano 99.7
d1krha1100 Benzoate dioxygenase reductase {Acinetobacter sp. 99.7
d2piaa1103 Phthalate dioxygenase reductase {Pseudomonas cepac 99.69
d1jb9a2154 Ferredoxin reductase (flavodoxin reductase) {Maize 99.69
d1ep3b1101 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.68
d1tvca1109 Methane monooxygenase component C, MmoC {Methyloco 99.68
d1qfja197 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.68
d1a8pa2158 Ferredoxin reductase (flavodoxin reductase) {Azoto 99.66
d1ja1a3160 NADPH-cytochrome p450 reductase {Rat (Rattus norve 99.65
d1ddga2153 Sulfite reductase flavoprotein {Escherichia coli [ 99.65
d1fnda1136 Ferredoxin reductase (flavodoxin reductase) N-term 99.6
d2bmwa1133 Ferredoxin reductase (flavodoxin reductase) N-term 99.58
d1f20a2165 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 99.55
d1ep3b2160 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.5
d1jb9a1157 Ferredoxin reductase (flavodoxin reductase) N-term 99.38
d1ddga1221 Sulfite reductase flavoprotein {Escherichia coli [ 97.35
d1ja1a1279 NADPH-cytochrome p450 reductase {Rat (Rattus norve 96.8
d1f20a1270 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 96.19
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ferredoxin reductase-like, C-terminal NADP-linked domain
superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain
family: Reductases
domain: cytochrome b5 reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=198.96  Aligned_cols=146  Identities=57%  Similarity=1.006  Sum_probs=127.6

Q ss_pred             ceeeccCCCCCCCCCCCcceEEEEEcCcchHhHHHHHHHHHhCCCCCccEEEEEecCCchhhhhHHHHHHHHHhCCCcEE
Q psy581          164 EFHIRAVSKKDPPTNLKVTQLSMIAGGTGITPMLQLVRHITKDPTDNTKMSLIFANQSEKDILLREELEEAAAKNPDQFK  243 (343)
Q Consensus       164 ~f~l~~~~~~~~~~~~~~~~vv~iA~GtGIap~~sll~~~~~~~~~~~~v~li~~~r~~~~~~~~~el~~l~~~~~~~~~  243 (343)
                      .|.+++ +.++++.....++++||||||||||+++|+++++.+....++++|+|++|+.+++++++||+++.++++.+++
T Consensus         2 ~f~~~p-~~~~~~~~~~~k~i~lIagGtGItP~~s~l~~~l~~~~~~~~i~L~~~~r~~~~~~~~~el~~l~~~~~~~~~   80 (147)
T d1umka2           2 KFAIRP-DKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFK   80 (147)
T ss_dssp             EEEECS-STTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTTCCCEEEEEEEESSGGGCTTHHHHHHHHHHCTTTEE
T ss_pred             eeEecC-CCCCCcccccCCeEEEEECCeecchHHHHHHHHHhcCCCCceEEEEEEeCccccchhHHHHhhhhhhcCcceE
Confidence            455555 4444444456799999999999999999999998765456789999999999999999999999999888899


Q ss_pred             EEEEecCCCCCCcccccccCHHHHHhhcCCCCCCcEEEEeCCCccccccccCCCCcccceeeeeccccccccCCCCcchh
Q psy581          244 LWYTVDRPEDGWKYSTGFVSAEMIAEHLFPPSPDNLVLMCGPPRKTVKNNLKPEDKKEMKTLFSEFNKMKIHEGPPPMIN  323 (343)
Q Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~i~vCGp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (343)
                      +++..+++..++....|+++++.+.+.+.....++.+|+|||                                 ++|++
T Consensus        81 ~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~vyiCGP---------------------------------~~m~~  127 (147)
T d1umka2          81 LWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGP---------------------------------PPMIQ  127 (147)
T ss_dssp             EEEEESSCCSSCSSEESSCCHHHHHHHSCCGGGCCEEEEESC---------------------------------HHHHH
T ss_pred             EEEEecccccCcccceeehHHHHHHHhcCCCcCCcEEEEeCC---------------------------------HHHHH
Confidence            999999998889999999999888888876667889999999                                 99998


Q ss_pred             hhhhhhHhhCCCCCCceEeC
Q psy581          324 FACKPNLDKLGYSEKLRFSY  343 (343)
Q Consensus       324 ~~~~~~L~~~g~~~~~i~~~  343 (343)
                      .+++.+|+++|+++++||+|
T Consensus       128 ~~~~~~L~~~G~~~e~i~~F  147 (147)
T d1umka2         128 YACLPNLDHVGHPTERCFVF  147 (147)
T ss_dssp             HTTHHHHHHHTCCGGGEEEC
T ss_pred             HHHHHHHHHcCCCHHHEEEC
Confidence            67889999999999999997
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure