Psyllid ID: psy5893

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180--
TRSAHDGPYSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGIHGAMSGAISSDDSDDENDEDDTSDDDTESGQGSMKKYKEQVVSSQDGRKRRKVMFDDDLEDNMDDDDDDDDDDETDDDNDEDNEEESEEEEENEEDDDEERKAEKKNSKNEHVQELTAKQKNPKAFTFQSVIKGERKFRSTKPTVVPQPRMSDKDLAIRHKITSALAGLNSKEEEEEEQEDSAFSDESADDNSSDEDETVEPKTHKDSKNPEEDTGLNWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVTMEGDEAPNKKVHRKRQAELTAKQKNPKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSGGVSGGGSGDDKPKTRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPKYKSKETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKNSKEKQAMKARMVALKLRAKAAEEAKQQRQRVMKKDIFRTLRMPKVMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTWLT
cccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccHHHHHHHccHHHHHcccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEccccccccHHHHHHHHHHcccccccccccccHHHHHcccccEEEcccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccHHHHcccccccEEEEEccccccccEEEEEEEEEcccccccccccccEEEEEEEEEEEEEcEEEccccccccEEccccccccEEEEEEEEEccccccEEEEEEEccccccccEEEEEEEEEccccccEEEEEEEEEcccEEEEEcEEEEEcccccHHHHccccccEEEEccccccEEEccccccccEEEEEEcccccccHHHHHHHcEEEccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHcccccccccccEEEEccccccEEHHHHHHHHHHcccccccccEEEEEEEEEccccccccccccccEEEEEcEEEEEEccccccccccccEEEccccccccEEEEEEEEcccccccEEEEEEEcccccccEEEc
cccccccccccccccccHHHHHHHHHHHHHHcccccccccEEcccEcccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHEEHcccHHHcccHHcccccccccccccccccccccccccccccccEEEEcccccEEEEEEEcccccccccccccccccccccccccccccHcccccccccccccHHHcHHHHHHHHHHHHHHHHHHcccccEEcHHHHccHHHHccccccccccHHcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHcccccHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHcccccccccEEEEccccEEEEEEEcccccccHHHHHHHHHHHccHHHHHccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHEEEEccccccEEEEEEEccccHHHHHcccccccEEEEEccccccccEEEEEEEEEccccHHEccccccEEEEEcccEccccEEEEEccccccccHHHccccccEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEEEcccccHEEEEEEEccccHHHHccEEEEHccccccHEEEEEcccEEEEccccccHEHHccccccccEEEEHHHHHHHccEEEEEEccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccEEccccccccccccHHHHHHcccccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEHHHHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHcccccEEEccccHHHHHccccccccHHEcccccccEEEEEEEEEccccHHHHccccccEEEEEccccccccEEEEEEcccccccEEEcccccccEEEEEEccccccccEEEEEEEEcccccccEEc
trsahdgpysvgcakisrNSLCINIWNWftkrvypvctapnnegihrqefeiepitfiecnndinsmidISKVADLVLLLIDASFGFEMEIFEFLNICQvhgestekSMMEIDGIHgamsgaissddsddendeddtsdddtesgqgsmkkYKEQVVSSqdgrkrrkvmfdddlednmddddddddddetdddndedneeeseeeeeneedddEERKAEKKNSKNEHVQELTakqknpkaftfqSVIKGerkfrstkptvvpqprmsdkdLAIRHKITSALaglnskeeeeeeqedsafsdesaddnssdedetvepkthkdsknpeedtglnwkSDLAQKAASAFLERQANIVNLAKYvygdmedvsvtmegdeapnkkvHRKRQAELTakqknpkaftfQSVIKGERKFRRKEdiqakkhhvpqvdrtplepppivvavvgppqvgkSTLIRCLIKnftktplsvikgpvtLIIKDSIRDcfvtgkwkasedasellrlddmdddeelfgdfedletgekhsgdksgggsggvsgggsgddkpKTRAELMEKKRKLKEQFdaeyddkdgggntyyddlKTQATRQAELNrqqfhdlddnARVELEGFRAGLYIRVeldgmpcelienfdptyplivgglqpgeetiGCVRARVKKHRWygkilksgnpvimsvgwrrfqtlpiyskqednmryrmlkytPQHVACMahfwgpitrsgtgflavqdvakrepgfrviatgtildanqtAEVTKKLkltgvpmkiyKKTAFIKDMFNSTLEVAKfegakirtvsgIRGQIKKALnkpqgafratfedkimlSDIVFCRtwykvdipklynpvtslllppeqkdswtgmkttgqlkrerglhndpqfdsmytpivrkpktmtklkiPKALqkelpyhmkpkyksketpkpqrvaVIHSEREQKVASLMKMLRTNYSEKNSKEKQAMKARMVALKLRAKAAEEAKQQRQRVMKKDIfrtlrmpkvMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVmkfrpliwqttHSYMLVTYTVMLKLLRLVgttgnmncfSFQARVKKHRWYgkilksgnpvimsvgwrrfqtlpiyskqednmryrmlkytPQHVACMahfwgpitrsgtgflaVQDVAKREVRTWLT
trsahdgpysvgcaKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGIHGAMSGAISSDDSDDENDEDDtsdddtesgqgsmkkykeqvvssqdgrkrrkvmfdddlednmddddddddddetdddndedneeeseeeeeneedddeerkaekknsknehvqeltakqknpkaftfqsvikgerkfrstkptvvpqprmsdkdlaIRHKITSalaglnskeeeeeeqedsafsdesaddnssdedetvepkthkdsknpeedtglnWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVtmegdeapnkkvHRKRQAeltakqknpkaftfqsvIKGERkfrrkediqakkhhvpqvdrtplepPPIVVAVVGPPQVGKSTLIRCLIKnftktplsvikgpvtliIKDSIRDCFVtgkwkasedasellrlddmDDDEELFGDFEDLetgekhsgdksgggsggvsgggsgddkpKTRAELMEKKRKLkeqfdaeyddkdgggnTYYDDLKTQATRQAELNrqqfhdlddnARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHrwygkilksgnpvimsvgwRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIAtgtildanqtaevtkklkltgvpmkiyKKTAFIKDMFNSTLEVAkfegakirtvsgirgqikkalnkpqgafratfedkimLSDIVFCRTWYKVDIPKLYNPVTSlllppeqkdswtgMKTTgqlkrerglhndpqfdsmytpivrkpktmtklkipkalqkelpyhmkpkyksketpkpqrvavihsereqkVASLMKMLRTnyseknskekQAMKARMVALKLRAKAAEEakqqrqrvmkkdifrtlrmpkvmgvlthldmlknnKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKilksgnpvimsvgwRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTWLT
TRSAHDGPYSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGIHGAMSGAIssddsddendeddtsdddtesGQGSMKKYKEQVVSSQDGRKRRKVMFdddlednmddddddddddetdddndedneeeseeeeeneedddeeRKAEKKNSKNEHVQELTAKQKNPKAFTFQSVIKGERKFRSTKPTVVPQPRMSDKDLAIRHKITSALAGLNskeeeeeeqedsafsdesaddnssdedeTVEPKTHKDSKNPEEDTGLNWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVTMEGDEAPNKKVHRKRQAELTAKQKNPKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEpppivvavvgppqvGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKASEDASellrlddmdddeelfgdfedleTGEKHsgdksgggsggvsgggsgddKPKTRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPKYKSKETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKNSKEKQAMKARMValklrakaaeeakqqrqrVMKKDIFRTLRMPKVMGVLTHLDmlknnktlkttkkmlkHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTWLT
********YSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHG***********************************************************************************************************************************************************************************************************************************************AASAFLERQANIVNLAKYVYGDMEDV********************************************************************PIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKA********************************************************************************************************HDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLL**************************************************************************************************************************************KDIFRTLRMPKVMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTW**
*****DGPYSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGI****************************************************************************************************************************************************************************************************************************************************V*********************************************************************************************RCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGK**********************FGDFE***************************************************DDKDGGGNTYYDDLKTQATRQA************N*RVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPP*******************************************LKIPKALQKE******************************VASLMKMLRT************************************************PKVMGVLTHLDMLK**************RFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKRE*RTWL*
*********SVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGIHGAMSGA*****************************************KRRKVMFDDDLEDNMD***************************************************LTAKQKNPKAFTFQSVIKGERKFRSTKPTVVPQPRMSDKDLAIRHKITSALAG***********************************************GLNWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVTMEGD*******************KNPKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLE****************************TRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPKY***********AVIHSEREQKVASLMKMLRTNYS**********KARMVALKLR*************VMKKDIFRTLRMPKVMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTWLT
******GPYSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTE****E***************************************KYKEQVVSSQDGRKRRKVMFDDD********************************************************EL*******KAFTFQSVIKGE*******************D*A***K*TS**A************************************************GLNWKSDLAQKAASAFLERQANIVNLAKYVYGDME****************************KNPKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHS*************GGSGDDKPKTRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPK**S*ETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKNSKEKQAMKARMVALKLRAKAAEEAKQQRQRVMKKDIFRTLRMPKVMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREV*T*L*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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TRSAHDGPYSVGCAKISRNSLCINIWNWFTKRVYPVCTAPNNEGIHRQEFEIEPITFIECNNDINSMIDISKVADLVLLLIDASFGFEMEIFEFLNICQVHGESTEKSMMEIDGIHGAMSGAISSDDSDDENDEDDTSDDDTESGQGSMKKYKEQVVSSQDGRKRRKVMFDDDLEDNMDDDDDDDDDDETDDDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKNEHVQELTAKQKNPKAFTFQSVIKGERKFRSTKPTVVPQPRMSDKDLAIRHKITSALAGLNSKEEEEEEQEDSAFSDESADDNSSDEDETVEPKTHKDSKNPEEDTGLNWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVTMEGDEAPNKKVHRKRQAELTAKQKNPKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLIIKDSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSGGVSGGGSGDDKPKTxxxxxxxxxxxxxxxxxxxxxKDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPKYKSKETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKNSKExxxxxxxxxxxxxxxxxxxxxKQQRQRVMKKDIFRTLRMPKVMGVLTHLDMLKNNKTLKTTKKMLKHRFWTEVYAGAKLFYLSGIVHGEYMKNEVKNLGRFIAVMKFRPLIWQTTHSYMLVTYTVMLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREVRTWLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1182 2.2.26 [Sep-21-2011]
Q146921282 Ribosome biogenesis prote yes N/A 0.396 0.365 0.552 1e-150
O946531121 Ribosome biogenesis prote yes N/A 0.416 0.438 0.416 1e-106
Q089651183 Ribosome biogenesis prote yes N/A 0.423 0.422 0.404 1e-105
A8MV67101 Putative BMS1-like protei no N/A 0.083 0.980 0.574 2e-33
A8MTN0101 Putative BMS1-like protei no N/A 0.083 0.980 0.574 3e-33
A8MXU9101 Putative BMS1-like protei no N/A 0.083 0.980 0.564 1e-32
Q5XGY1815 Pre-rRNA-processing prote N/A N/A 0.188 0.273 0.267 5e-22
Q5SWD9803 Pre-rRNA-processing prote no N/A 0.203 0.300 0.258 1e-19
Q9VP47814 Pre-rRNA-processing prote no N/A 0.195 0.283 0.266 2e-17
Q54YA7826 Pre-rRNA-processing prote no N/A 0.208 0.299 0.292 3e-17
>sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1 Back     alignment and function desciption
 Score =  532 bits (1371), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/487 (55%), Positives = 351/487 (72%), Gaps = 18/487 (3%)

Query: 476  IKDSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSGG- 534
            + +SIRDCFVTGKW+  +DA+++L      +DEEL+GDFEDLETG+ H G KSG  +   
Sbjct: 750  VMNSIRDCFVTGKWEDDKDAAKVLA-----EDEELYGDFEDLETGDVHKG-KSGPNTQNE 803

Query: 535  -----VSGGGSGDDKPKTRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAE 589
                 V      D++   + + ++KKRKLKE FDAEYD+   G +TY+DDLK +  +QA+
Sbjct: 804  DIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEYDE---GESTYFDDLKGEMQKQAQ 860

Query: 590  LNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIG 649
            LNR +F D DD ARV+ EGFR G+Y+R+E++ +PCE ++NFDP YP+I+GGL   E  +G
Sbjct: 861  LNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVG 920

Query: 650  CVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMA 709
             V+ R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R+LKYTPQH+ C A
Sbjct: 921  YVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGA 980

Query: 710  HFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKT 769
             FWGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKLKLTG P KI+K T
Sbjct: 981  AFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNT 1040

Query: 770  AFIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRT 829
            +FIK MFNS LEVAKFEGA IRTVSGIRGQIKKAL  P+GAFRA+FEDK+++SDIVF RT
Sbjct: 1041 SFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRT 1100

Query: 830  WYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKT 889
            WY V IP  YNPVTSLL P  +KD+W+GM+TTGQL+   G+      DS+Y PI+R+ K 
Sbjct: 1101 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKH 1160

Query: 890  MTKLKIPKALQKELPYHMKPKYKSKETPKPQ---RVAVIHSEREQKVASLMKMLRTNYSE 946
               L IPKALQK LP+  KPK ++K    P+   R AVI    E+K+ +L+  L T +S+
Sbjct: 1161 FNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQ 1220

Query: 947  KNSKEKQ 953
            K  K K+
Sbjct: 1221 KMKKAKE 1227
May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus.
Homo sapiens (taxid: 9606)
>sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bms1 PE=1 SV=2 Back     alignment and function description
>sp|Q08965|BMS1_YEAST Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1 Back     alignment and function description
>sp|A8MV67|YO021_HUMAN Putative BMS1-like protein ENSP00000383088 OS=Homo sapiens PE=5 SV=1 Back     alignment and function description
>sp|A8MTN0|YI027_HUMAN Putative BMS1-like protein ENSP00000382360 OS=Homo sapiens PE=5 SV=1 Back     alignment and function description
>sp|A8MXU9|YO022_HUMAN Putative BMS1-like protein ENSP00000383048 OS=Homo sapiens PE=5 SV=1 Back     alignment and function description
>sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1 PE=2 SV=1 Back     alignment and function description
>sp|Q5SWD9|TSR1_MOUSE Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus GN=Tsr1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VP47|TSR1_DROME Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster GN=CG7338 PE=1 SV=1 Back     alignment and function description
>sp|Q54YA7|TSR1_DICDI Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium discoideum GN=tsr1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1182
3838632231238 PREDICTED: uncharacterized protein LOC10 0.420 0.401 0.630 0.0
2420123531217 ribosome biogenesis protein bms1, putati 0.521 0.506 0.515 0.0
3454881661270 PREDICTED: hypothetical protein LOC10012 0.424 0.395 0.632 0.0
3287866941219 PREDICTED: hypothetical protein LOC41404 0.415 0.402 0.627 1e-180
1935988071225 PREDICTED: hypothetical protein LOC10016 0.423 0.408 0.629 1e-179
3504234341260 PREDICTED: hypothetical protein LOC10074 0.417 0.391 0.626 1e-179
3072055461268 Ribosome biogenesis protein BMS1-like pr 0.420 0.391 0.621 1e-179
3407193991258 PREDICTED: hypothetical protein LOC10064 0.417 0.391 0.614 1e-177
3320215391239 Ribosome biogenesis protein BMS1-like pr 0.414 0.395 0.605 1e-177
3227825391224 hypothetical protein SINV_80643 [Solenop 0.397 0.383 0.627 1e-175
>gi|383863223|ref|XP_003707081.1| PREDICTED: uncharacterized protein LOC100876332 [Megachile rotundata] Back     alignment and taxonomy information
 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/514 (63%), Positives = 398/514 (77%), Gaps = 17/514 (3%)

Query: 480  IRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSGGVSGGG 539
            + + FVTGKWK SEDA ELL+LDDMDD EEL+GDFEDLET EKH G++S           
Sbjct: 728  VTNRFVTGKWKDSEDAEELLKLDDMDD-EELYGDFEDLETNEKHEGEESKS--------- 777

Query: 540  SGDDKPKTRAELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQATRQAELNRQQFHDLD 599
            S  D+ + R +L+EKK+KLKEQFD+EYD+  G   TYYD+LK +  +Q+ LN+ +F  +D
Sbjct: 778  SITDEKEERRKLLEKKKKLKEQFDSEYDN--GETKTYYDELKLEVEKQSNLNKSEFDGVD 835

Query: 600  DNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARVKKHR 659
            DN RV+LEG+R G+Y+RVE++ +PCELI + DPTYPLI+GGL  GEE IG V+ R+KKHR
Sbjct: 836  DNVRVQLEGYRPGMYVRVEIETVPCELITHLDPTYPLIIGGLLHGEENIGYVQTRIKKHR 895

Query: 660  WYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSG 719
            WY KILKS +P+I+S+GWRRFQTLPI+SK EDN++ RMLKYTP+HVACMAHFWGPIT   
Sbjct: 896  WYSKILKSKDPLILSIGWRRFQTLPIFSKLEDNLKNRMLKYTPEHVACMAHFWGPITPQS 955

Query: 720  TGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNST 779
            TG LA+QDVA R PGFR+ ATG+I++ +++ ++ KKLKLTGVP+KIYKKTAFIKDMFNS 
Sbjct: 956  TGVLAIQDVATRIPGFRIAATGSIVEMDKSTQIMKKLKLTGVPLKIYKKTAFIKDMFNSV 1015

Query: 780  LEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLY 839
            LEVAKFEGAKI+TVSGIRGQIKKA++KP+G FRATFEDKI+LSDIVFCRTWYKVD+PK Y
Sbjct: 1016 LEVAKFEGAKIKTVSGIRGQIKKAVSKPEGCFRATFEDKILLSDIVFCRTWYKVDVPKFY 1075

Query: 840  NPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMTKLKIPKAL 899
            NPVTSLLLPP++K+ W GMKTTGQLKRER +      DSMYTPI R+PK    L IP++L
Sbjct: 1076 NPVTSLLLPPDEKNRWQGMKTTGQLKRERNIRVPANTDSMYTPIEREPKVFKPLVIPRSL 1135

Query: 900  QKELPYHMKPKYKSKETPKP-----QRVAVIHSEREQKVASLMKMLRTNYSEKNSKEKQA 954
            QKELPY  KPK        P      RVAV+   +E+ VA LM M+RTNY  K  + KQA
Sbjct: 1136 QKELPYKDKPKLGPHSGLLPPKFRDNRVAVVREPKEEHVAKLMTMIRTNYVHKQRQLKQA 1195

Query: 955  MKARMVALKLRAKAAEEAKQQRQRVMKKDIFRTL 988
             K R+ AL+ R  A EE K +RQ+ +KK +FR L
Sbjct: 1196 TKQRIAALRTRITAEEERKLKRQKELKKHVFREL 1229

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242012353|ref|XP_002426897.1| ribosome biogenesis protein bms1, putative [Pediculus humanus corporis] gi|212511126|gb|EEB14159.1| ribosome biogenesis protein bms1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|345488166|ref|XP_001605043.2| PREDICTED: hypothetical protein LOC100121428 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328786694|ref|XP_397483.4| PREDICTED: hypothetical protein LOC414048 [Apis mellifera] Back     alignment and taxonomy information
>gi|193598807|ref|XP_001951128.1| PREDICTED: hypothetical protein LOC100169539 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|350423434|ref|XP_003493481.1| PREDICTED: hypothetical protein LOC100743997 [Bombus impatiens] Back     alignment and taxonomy information
>gi|307205546|gb|EFN83851.1| Ribosome biogenesis protein BMS1-like protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340719399|ref|XP_003398141.1| PREDICTED: hypothetical protein LOC100649776 [Bombus terrestris] Back     alignment and taxonomy information
>gi|332021539|gb|EGI61904.1| Ribosome biogenesis protein BMS1-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322782539|gb|EFZ10488.1| hypothetical protein SINV_80643 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1182
FB|FBgn00366861159 CG7728 [Drosophila melanogaste 0.348 0.355 0.575 1.8e-171
UNIPROTKB|E1BPP21290 BMS1 "Uncharacterized protein" 0.401 0.368 0.528 1.1e-165
UNIPROTKB|F1PKN21287 BMS1 "Uncharacterized protein" 0.401 0.369 0.530 3.8e-165
UNIPROTKB|Q146921282 BMS1 "Ribosome biogenesis prot 0.401 0.370 0.519 4.3e-164
UNIPROTKB|F1NH691304 BMS1 "Uncharacterized protein" 0.404 0.366 0.526 6.9e-164
ZFIN|ZDB-GENE-060720-21221 bms1l "BMS1-like, ribosome ass 0.396 0.384 0.509 7.7e-158
UNIPROTKB|E9PTV41282 Bms1 "Protein Bms1" [Rattus no 0.401 0.370 0.482 1.2e-148
WB|WBGene000220211055 Y61A9LA.10 [Caenorhabditis ele 0.397 0.445 0.434 9.3e-131
DICTYBASE|DDB_G02878911205 bms1l "BMS1-like ribosome biog 0.333 0.326 0.472 1.8e-129
ASPGD|ASPL00000059951179 AN6334 [Emericella nidulans (t 0.340 0.340 0.484 2e-123
FB|FBgn0036686 CG7728 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1281 (456.0 bits), Expect = 1.8e-171, Sum P(4) = 1.8e-171
 Identities = 248/431 (57%), Positives = 319/431 (74%)

Query:   547 TRAELMEKKRKLKEQFDAEYDDK-DG----------GGNTYYDDLKTQATRQAELNRQQF 595
             T+AELM KK KLK +FDAEYD+  +G          G +++Y+DLK +A RQ+ELN+ +F
Sbjct:   692 TKAELMAKKLKLKAKFDAEYDNSGEGKGEEDNGRITGDHSFYEDLKAEAQRQSELNKSEF 751

Query:   596 HDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCVRARV 655
               LD+  R+++EG+R GLY+R+    +P E IENFD +YP++VG L   EE +G V  +V
Sbjct:   752 AHLDNEFRIQIEGYRPGLYVRLGFKQLPAEFIENFDASYPVLVGALNMTEENVGYVNCKV 811

Query:   656 KKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPI 715
             KKHRWY KILK+G+P+I+S+GWRRFQT+ IY+K EDN R R LKYTP HV C   FWGPI
Sbjct:   812 KKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVEDNFRQRYLKYTPNHVTCSMTFWGPI 871

Query:   716 TRSGTGFLAVQDVAK-----REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTA 770
             T   TGFLA+Q V +     R  GFR+ ATG + + ++++++ KKLKL G P KIYKKTA
Sbjct:   872 TPQNTGFLALQTVRQDQEEMRRLGFRIAATGCVTEVDKSSQIMKKLKLVGHPFKIYKKTA 931

Query:   771 FIKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTW 830
             F+KDMFNS+LEVAKFEGAKI+TVSGIRGQIKKA + P+G++RATFEDKI+LSDIVFCRTW
Sbjct:   932 FVKDMFNSSLEVAKFEGAKIKTVSGIRGQIKKAHHTPEGSYRATFEDKILLSDIVFCRTW 991

Query:   831 YKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTM 890
             ++V++P+ Y PV+SLLLP +QK  W GMKT GQLKRER + N  Q DSMYT IVRK K  
Sbjct:   992 FRVEVPRFYAPVSSLLLPLDQKSQWQGMKTLGQLKRERAVQNAAQPDSMYTTIVRKEKIF 1051

Query:   891 TKLKIPKALQKELPYHMKPKYKSKETPKP--QRVAVIHSEREQKVASLMKMLRTNYSEKN 948
               L IPKALQ+ LPY  KPK    E PK   +RVAV++S  EQKV+ +MKM+ TN+ +K 
Sbjct:  1052 RPLTIPKALQRALPYKDKPKL-GPENPKAALERVAVVNSPYEQKVSKMMKMIETNFKDKR 1110

Query:   949 SKEKQAMKARM 959
              +E+  MK R+
Sbjct:  1111 QRERMEMKKRI 1121
GO:0005634 "nucleus" evidence=IEA
GO:0042254 "ribosome biogenesis" evidence=IEA
GO:0022008 "neurogenesis" evidence=IMP
UNIPROTKB|E1BPP2 BMS1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKN2 BMS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q14692 BMS1 "Ribosome biogenesis protein BMS1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH69 BMS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060720-2 bms1l "BMS1-like, ribosome assembly protein (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTV4 Bms1 "Protein Bms1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00022021 Y61A9LA.10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0287891 bms1l "BMS1-like ribosome biogenesis protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000005995 AN6334 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1182
COG51921077 COG5192, BMS1, GTP-binding protein required for 40 1e-106
pfam04950293 pfam04950, DUF663, Protein of unknown function (DU 4e-92
cd01882231 cd01882, BMS1, Bms1, an essential GTPase, promotes 1e-47
cd01882231 cd01882, BMS1, Bms1, an essential GTPase, promotes 5e-34
cd01882231 cd01882, BMS1, Bms1, an essential GTPase, promotes 2e-27
COG5192 1077 COG5192, BMS1, GTP-binding protein required for 40 2e-26
pfam04950293 pfam04950, DUF663, Protein of unknown function (DU 4e-24
COG5192 1077 COG5192, BMS1, GTP-binding protein required for 40 8e-23
COG5177769 COG5177, COG5177, Uncharacterized conserved protei 2e-18
COG5192 1077 COG5192, BMS1, GTP-binding protein required for 40 5e-18
COG51921077 COG5192, BMS1, GTP-binding protein required for 40 6e-15
pfam04147809 pfam04147, Nop14, Nop14-like family 5e-09
pfam0814281 pfam08142, AARP2CN, AARP2CN (NUC121) domain 2e-08
smart0078583 smart00785, AARP2CN, AARP2CN (NUC121) domain 2e-08
pfam03153332 pfam03153, TFIIA, Transcription factor IIA, alpha/ 1e-07
PTZ00007337 PTZ00007, PTZ00007, (NAP-L) nucleosome assembly pr 2e-07
pfam05793528 pfam05793, TFIIF_alpha, Transcription initiation f 3e-07
PRK05901509 PRK05901, PRK05901, RNA polymerase sigma factor; P 4e-07
PRK05901509 PRK05901, PRK05901, RNA polymerase sigma factor; P 7e-07
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 8e-07
PRK02363129 PRK02363, PRK02363, DNA-directed RNA polymerase su 1e-06
pfam02724583 pfam02724, CDC45, CDC45-like protein 1e-06
pfam05285317 pfam05285, SDA1, SDA1 2e-06
pfam04006613 pfam04006, Mpp10, Mpp10 protein 2e-06
pfam04931784 pfam04931, DNA_pol_phi, DNA polymerase phi 2e-06
pfam05764238 pfam05764, YL1, YL1 nuclear protein 3e-06
COG5137279 COG5137, COG5137, Histone chaperone involved in ge 4e-06
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 5e-06
COG5593821 COG5593, COG5593, Nucleic-acid-binding protein pos 6e-06
pfam04615728 pfam04615, Utp14, Utp14 protein 1e-05
pfam10446449 pfam10446, DUF2457, Protein of unknown function (D 1e-05
PTZ00248319 PTZ00248, PTZ00248, eukaryotic translation initiat 1e-05
pfam07133164 pfam07133, Merozoite_SPAM, Merozoite surface prote 1e-05
pfam04147809 pfam04147, Nop14, Nop14-like family 2e-05
pfam09184285 pfam09184, PPP4R2, PPP4R2 2e-05
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 3e-05
PTZ00482844 PTZ00482, PTZ00482, membrane-attack complex/perfor 3e-05
pfam04889241 pfam04889, Cwf_Cwc_15, Cwf15/Cwc15 cell cycle cont 3e-05
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 4e-05
pfam04050171 pfam04050, Upf2, Up-frameshift suppressor 2 4e-05
pfam09538104 pfam09538, FYDLN_acid, Protein of unknown function 4e-05
PRK02363129 PRK02363, PRK02363, DNA-directed RNA polymerase su 5e-05
pfam05285317 pfam05285, SDA1, SDA1 5e-05
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 5e-05
PRK05901509 PRK05901, PRK05901, RNA polymerase sigma factor; P 6e-05
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 7e-05
pfam08595141 pfam08595, RXT2_N, RXT2-like, N-terminal 7e-05
pfam03344715 pfam03344, Daxx, Daxx Family 8e-05
pfam02724583 pfam02724, CDC45, CDC45-like protein 9e-05
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 9e-05
PRK14891131 PRK14891, PRK14891, 50S ribosomal protein L24e/unk 9e-05
TIGR02907338 TIGR02907, spore_VI_D, stage VI sporulation protei 9e-05
PRK02363129 PRK02363, PRK02363, DNA-directed RNA polymerase su 1e-04
pfam04615728 pfam04615, Utp14, Utp14 protein 1e-04
PTZ00482844 PTZ00482, PTZ00482, membrane-attack complex/perfor 1e-04
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 1e-04
pfam09538104 pfam09538, FYDLN_acid, Protein of unknown function 1e-04
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 1e-04
PHA02664534 PHA02664, PHA02664, hypothetical protein; Provisio 1e-04
PRK08581619 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami 1e-04
pfam04546211 pfam04546, Sigma70_ner, Sigma-70, non-essential re 1e-04
COG52714600 COG5271, MDN1, AAA ATPase containing von Willebran 2e-04
pfam04006613 pfam04006, Mpp10, Mpp10 protein 2e-04
pfam10446449 pfam10446, DUF2457, Protein of unknown function (D 2e-04
pfam09538104 pfam09538, FYDLN_acid, Protein of unknown function 2e-04
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 2e-04
PTZ00415 2849 PTZ00415, PTZ00415, transmission-blocking target a 2e-04
COG3343175 COG3343, RpoE, DNA-directed RNA polymerase, delta 2e-04
pfam12496126 pfam12496, BNIP2, Bcl2-/adenovirus E1B nineteen kD 2e-04
PRK02315233 PRK02315, PRK02315, adaptor protein; Provisional 3e-04
pfam05327554 pfam05327, RRN3, RNA polymerase I specific transcr 3e-04
pfam03247106 pfam03247, Prothymosin, Prothymosin/parathymosin f 3e-04
pfam05285317 pfam05285, SDA1, SDA1 4e-04
COG4547620 COG4547, CobT, Cobalamin biosynthesis protein CobT 4e-04
pfam09073424 pfam09073, BUD22, BUD22 4e-04
pfam00183529 pfam00183, HSP90, Hsp90 protein 4e-04
smart00017287 smart00017, OSTEO, Osteopontin 4e-04
PRK05901509 PRK05901, PRK05901, RNA polymerase sigma factor; P 5e-04
pfam05285317 pfam05285, SDA1, SDA1 5e-04
pfam03344715 pfam03344, Daxx, Daxx Family 5e-04
pfam04050171 pfam04050, Upf2, Up-frameshift suppressor 2 6e-04
pfam07093557 pfam07093, SGT1, SGT1 protein 6e-04
pfam11702509 pfam11702, DUF3295, Protein of unknown function (D 6e-04
pfam10446449 pfam10446, DUF2457, Protein of unknown function (D 7e-04
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 7e-04
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 7e-04
pfam04546211 pfam04546, Sigma70_ner, Sigma-70, non-essential re 7e-04
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 9e-04
pfam03344715 pfam03344, Daxx, Daxx Family 0.001
pfam04546211 pfam04546, Sigma70_ner, Sigma-70, non-essential re 0.001
COG3343175 COG3343, RpoE, DNA-directed RNA polymerase, delta 0.001
COG4547620 COG4547, CobT, Cobalamin biosynthesis protein CobT 0.001
pfam03985431 pfam03985, Paf1, Paf1 0.001
COG54061001 COG5406, COG5406, Nucleosome binding factor SPN, S 0.001
PRK05658619 PRK05658, PRK05658, RNA polymerase sigma factor Rp 0.001
pfam10446449 pfam10446, DUF2457, Protein of unknown function (D 0.002
smart00784106 smart00784, SPT2, SPT2 chromatin protein 0.002
TIGR01651600 TIGR01651, CobT, cobaltochelatase, CobT subunit 0.002
cd01856171 cd01856, YlqF, Circularly permuted YlqF GTPase 0.002
pfam03986146 pfam03986, Autophagy_N, Autophagocytosis associate 0.002
smart00382148 smart00382, AAA, ATPases associated with a variety 0.002
pfam06213282 pfam06213, CobT, Cobalamin biosynthesis protein Co 0.003
PHA0260880 PHA02608, 67, prohead core protein; Provisional 0.003
PLN031421033 PLN03142, PLN03142, Probable chromatin-remodeling 0.003
COG5137279 COG5137, COG5137, Histone chaperone involved in ge 0.004
PRK02315233 PRK02315, PRK02315, adaptor protein; Provisional 0.004
pfam14181155 pfam14181, YqfQ, YqfQ-like protein 0.004
pfam1194292 pfam11942, Spt5_N, Spt5 transcription elongation f 0.004
PRK14160211 PRK14160, PRK14160, heat shock protein GrpE; Provi 0.004
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
 Score =  360 bits (925), Expect = e-106
 Identities = 168/525 (32%), Positives = 272/525 (51%), Gaps = 30/525 (5%)

Query: 478  DSIRDCFVTGKWKASEDASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSGGVSG 537
              ++  F       S +  E L  DD        G+FEDLE  E  S ++     G    
Sbjct: 574  AQLKSRFQKDATLDSIEGEEELIQDDEK------GNFEDLEDEENSSDNEMEESRGSSVT 627

Query: 538  GGSGDDKPKT-----RAELMEKKRKLKEQFD-AEYDDKDGGGNTYYDDLKTQATRQAELN 591
              + +   +      R E   KK +L+  F+  E  D +     +Y + K +   Q ++N
Sbjct: 628  AENEESADEVDYETEREENARKKEELRGNFELEERGDPEKKDVDWYTEEKRKIEEQLKIN 687

Query: 592  RQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEETIGCV 651
            R +F  +   +RV +EG+RAG Y+R+ L  +P E ++ F+  YP+++GGL P E+ +G V
Sbjct: 688  RSEFETMVPESRVVIEGYRAGRYVRIVLSHVPLEFVDEFNSRYPIVLGGLLPAEKEMGIV 747

Query: 652  RARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 711
            + R+K+HRW+ KILK+ +P+I SVGWRRFQ++P+YS ++   R RMLKYTP+H+ C   F
Sbjct: 748  QGRIKRHRWHKKILKTNDPLIFSVGWRRFQSIPVYSMKDSRTRNRMLKYTPEHMHCNVSF 807

Query: 712  WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 771
            +GP+    TGF AVQ     +  FRV+A GTI D N  A++ KKLKL G P +I + T F
Sbjct: 808  YGPVVPPNTGFCAVQ---SEKGDFRVLALGTITDVNGDAKLVKKLKLVGYPKQIVQNTVF 864

Query: 772  IKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWY 831
            ++DMF S LEV KFEGA ++ VSG+RGQ+K    K  G +RA FE K+++SDI+  R + 
Sbjct: 865  VRDMFTSDLEVLKFEGASLKAVSGLRGQVKGPHGK-NGEYRAVFEGKMLMSDIITLRCFV 923

Query: 832  KVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRERGLHNDPQFDSMYTPIVRKPKTMT 891
             V++ +++ PV +LL        W G++   +++   GL +     +  +          
Sbjct: 924  PVEVHRIFIPVDNLLG------KWRGLRRLHEIRESLGLTHSYAPQNDSSSEEMGYGAEE 977

Query: 892  KLKIPKALQKELPYHMKPKYKSKETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKNSKE 951
               +P+ ++ +LP         +      R   +    E +    +K        K+ +E
Sbjct: 978  DYSLPREIESKLP------LDKRSIAVVSRRIELPVPPECREKHEIKDRIVKERIKDQEE 1031

Query: 952  KQAMKARMVALKLRAKAAEEAKQQRQRVMKKDIFRTL--RMPKVM 994
            K+ M++   A +      E+ ++QR R    D ++ +  +  K  
Sbjct: 1032 KERMESLQRAKEEEIGKKEKEREQRIRKTIHDNYKEMAKKRLKKK 1076

Length = 1077
>gnl|CDD|218343 pfam04950, DUF663, Protein of unknown function (DUF663) Back     alignment and domain information
>gnl|CDD|206669 cd01882, BMS1, Bms1, an essential GTPase, promotes assembly of preribosomal RNA processing complexes Back     alignment and domain information
>gnl|CDD|206669 cd01882, BMS1, Bms1, an essential GTPase, promotes assembly of preribosomal RNA processing complexes Back     alignment and domain information
>gnl|CDD|206669 cd01882, BMS1, Bms1, an essential GTPase, promotes assembly of preribosomal RNA processing complexes Back     alignment and domain information
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|218343 pfam04950, DUF663, Protein of unknown function (DUF663) Back     alignment and domain information
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|227504 COG5177, COG5177, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family Back     alignment and domain information
>gnl|CDD|219725 pfam08142, AARP2CN, AARP2CN (NUC121) domain Back     alignment and domain information
>gnl|CDD|129021 smart00785, AARP2CN, AARP2CN (NUC121) domain Back     alignment and domain information
>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit Back     alignment and domain information
>gnl|CDD|240226 PTZ00007, PTZ00007, (NAP-L) nucleosome assembly protein -L; Provisional Back     alignment and domain information
>gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Back     alignment and domain information
>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional Back     alignment and domain information
>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|235033 PRK02363, PRK02363, DNA-directed RNA polymerase subunit delta; Reviewed Back     alignment and domain information
>gnl|CDD|217203 pfam02724, CDC45, CDC45-like protein Back     alignment and domain information
>gnl|CDD|218538 pfam05285, SDA1, SDA1 Back     alignment and domain information
>gnl|CDD|217840 pfam04006, Mpp10, Mpp10 protein Back     alignment and domain information
>gnl|CDD|218333 pfam04931, DNA_pol_phi, DNA polymerase phi Back     alignment and domain information
>gnl|CDD|218737 pfam05764, YL1, YL1 nuclear protein Back     alignment and domain information
>gnl|CDD|227466 COG5137, COG5137, Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics] Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|227880 COG5593, COG5593, Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|218177 pfam04615, Utp14, Utp14 protein Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|240329 PTZ00248, PTZ00248, eukaryotic translation initiation factor 2 subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|148630 pfam07133, Merozoite_SPAM, Merozoite surface protein (SPAM) Back     alignment and domain information
>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family Back     alignment and domain information
>gnl|CDD|220135 pfam09184, PPP4R2, PPP4R2 Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|240433 PTZ00482, PTZ00482, membrane-attack complex/perforin (MACPF) Superfamily; Provisional Back     alignment and domain information
>gnl|CDD|218312 pfam04889, Cwf_Cwc_15, Cwf15/Cwc15 cell cycle control protein Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information
>gnl|CDD|217861 pfam04050, Upf2, Up-frameshift suppressor 2 Back     alignment and domain information
>gnl|CDD|220284 pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid) Back     alignment and domain information
>gnl|CDD|235033 PRK02363, PRK02363, DNA-directed RNA polymerase subunit delta; Reviewed Back     alignment and domain information
>gnl|CDD|218538 pfam05285, SDA1, SDA1 Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|219922 pfam08595, RXT2_N, RXT2-like, N-terminal Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|217203 pfam02724, CDC45, CDC45-like protein Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|184885 PRK14891, PRK14891, 50S ribosomal protein L24e/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|234055 TIGR02907, spore_VI_D, stage VI sporulation protein D Back     alignment and domain information
>gnl|CDD|235033 PRK02363, PRK02363, DNA-directed RNA polymerase subunit delta; Reviewed Back     alignment and domain information
>gnl|CDD|218177 pfam04615, Utp14, Utp14 protein Back     alignment and domain information
>gnl|CDD|240433 PTZ00482, PTZ00482, membrane-attack complex/perforin (MACPF) Superfamily; Provisional Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information
>gnl|CDD|220284 pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid) Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|177447 PHA02664, PHA02664, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated Back     alignment and domain information
>gnl|CDD|203043 pfam04546, Sigma70_ner, Sigma-70, non-essential region Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|217840 pfam04006, Mpp10, Mpp10 protein Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|220284 pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid) Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional Back     alignment and domain information
>gnl|CDD|225880 COG3343, RpoE, DNA-directed RNA polymerase, delta subunit [Transcription] Back     alignment and domain information
>gnl|CDD|221603 pfam12496, BNIP2, Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 Back     alignment and domain information
>gnl|CDD|235030 PRK02315, PRK02315, adaptor protein; Provisional Back     alignment and domain information
>gnl|CDD|218556 pfam05327, RRN3, RNA polymerase I specific transcription initiation factor RRN3 Back     alignment and domain information
>gnl|CDD|217450 pfam03247, Prothymosin, Prothymosin/parathymosin family Back     alignment and domain information
>gnl|CDD|218538 pfam05285, SDA1, SDA1 Back     alignment and domain information
>gnl|CDD|226920 COG4547, CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|220102 pfam09073, BUD22, BUD22 Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|214472 smart00017, OSTEO, Osteopontin Back     alignment and domain information
>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional Back     alignment and domain information
>gnl|CDD|218538 pfam05285, SDA1, SDA1 Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|217861 pfam04050, Upf2, Up-frameshift suppressor 2 Back     alignment and domain information
>gnl|CDD|219293 pfam07093, SGT1, SGT1 protein Back     alignment and domain information
>gnl|CDD|221173 pfam11702, DUF3295, Protein of unknown function (DUF3295) Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|203043 pfam04546, Sigma70_ner, Sigma-70, non-essential region Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|203043 pfam04546, Sigma70_ner, Sigma-70, non-essential region Back     alignment and domain information
>gnl|CDD|225880 COG3343, RpoE, DNA-directed RNA polymerase, delta subunit [Transcription] Back     alignment and domain information
>gnl|CDD|226920 COG4547, CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|217829 pfam03985, Paf1, Paf1 Back     alignment and domain information
>gnl|CDD|227693 COG5406, COG5406, Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>gnl|CDD|235549 PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|214818 smart00784, SPT2, SPT2 chromatin protein Back     alignment and domain information
>gnl|CDD|130712 TIGR01651, CobT, cobaltochelatase, CobT subunit Back     alignment and domain information
>gnl|CDD|206749 cd01856, YlqF, Circularly permuted YlqF GTPase Back     alignment and domain information
>gnl|CDD|217830 pfam03986, Autophagy_N, Autophagocytosis associated protein (Atg3), N-terminal domain Back     alignment and domain information
>gnl|CDD|214640 smart00382, AAA, ATPases associated with a variety of cellular activities Back     alignment and domain information
>gnl|CDD|148051 pfam06213, CobT, Cobalamin biosynthesis protein CobT Back     alignment and domain information
>gnl|CDD|177433 PHA02608, 67, prohead core protein; Provisional Back     alignment and domain information
>gnl|CDD|215601 PLN03142, PLN03142, Probable chromatin-remodeling complex ATPase chain; Provisional Back     alignment and domain information
>gnl|CDD|227466 COG5137, COG5137, Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics] Back     alignment and domain information
>gnl|CDD|235030 PRK02315, PRK02315, adaptor protein; Provisional Back     alignment and domain information
>gnl|CDD|222581 pfam14181, YqfQ, YqfQ-like protein Back     alignment and domain information
>gnl|CDD|221333 pfam11942, Spt5_N, Spt5 transcription elongation factor, acidic N-terminal Back     alignment and domain information
>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1182
COG51921077 BMS1 GTP-binding protein required for 40S ribosome 100.0
PF04950297 DUF663: Protein of unknown function (DUF663); Inte 100.0
KOG1980|consensus754 100.0
COG5192 1077 BMS1 GTP-binding protein required for 40S ribosome 100.0
COG5177769 Uncharacterized conserved protein [Function unknow 100.0
PF04950297 DUF663: Protein of unknown function (DUF663); Inte 99.95
KOG1951|consensus115 99.29
cd01882225 BMS1 Bms1. Bms1 is an essential, evolutionarily co 99.25
COG1126240 GlnQ ABC-type polar amino acid transport system, A 99.1
COG3839338 MalK ABC-type sugar transport systems, ATPase comp 99.09
COG3842352 PotA ABC-type spermidine/putrescine transport syst 99.05
COG1116248 TauB ABC-type nitrate/sulfonate/bicarbonate transp 99.03
COG3638258 ABC-type phosphate/phosphonate transport system, A 99.02
COG2884223 FtsE Predicted ATPase involved in cell division [C 98.97
COG1136226 SalX ABC-type antimicrobial peptide transport syst 98.96
COG1135339 AbcC ABC-type metal ion transport system, ATPase c 98.87
COG1120258 FepC ABC-type cobalamin/Fe3+-siderophores transpor 98.86
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 98.86
COG1117253 PstB ABC-type phosphate transport system, ATPase c 98.84
COG1127263 Ttg2A ABC-type transport system involved in resist 98.82
KOG0672|consensus218 98.77
cd03226205 ABC_cobalt_CbiO_domain2 Domain II of the ABC compo 98.72
COG3840231 ThiQ ABC-type thiamine transport system, ATPase co 98.72
COG1121254 ZnuC ABC-type Mn/Zn transport systems, ATPase comp 98.72
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 98.71
TIGR02314343 ABC_MetN D-methionine ABC transporter, ATP-binding 98.69
cd03263220 ABC_subfamily_A The ABCA subfamily mediates the tr 98.69
PRK11650356 ugpC glycerol-3-phosphate transporter ATP-binding 98.69
COG1131293 CcmA ABC-type multidrug transport system, ATPase c 98.69
COG1118345 CysA ABC-type sulfate/molybdate transport systems, 98.68
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 98.67
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 98.67
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 98.66
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 98.64
COG0411250 LivG ABC-type branched-chain amino acid transport 98.64
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 98.64
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 98.64
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 98.63
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 98.63
cd03269210 ABC_putative_ATPase This subfamily is involved in 98.63
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 98.63
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 98.62
PRK13646286 cbiO cobalt transporter ATP-binding subunit; Provi 98.62
COG4619223 ABC-type uncharacterized transport system, ATPase 98.62
PRK13647274 cbiO cobalt transporter ATP-binding subunit; Provi 98.62
cd03257228 ABC_NikE_OppD_transporters The ABC transporter sub 98.62
cd03261235 ABC_Org_Solvent_Resistant ABC (ATP-binding cassett 98.62
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 98.62
PRK11432351 fbpC ferric transporter ATP-binding subunit; Provi 98.62
cd03262213 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- 98.62
PRK13537306 nodulation ABC transporter NodI; Provisional 98.62
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 98.62
PRK10908222 cell division protein FtsE; Provisional 98.61
PRK11831269 putative ABC transporter ATP-binding protein YrbF; 98.61
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 98.61
TIGR01188302 drrA daunorubicin resistance ABC transporter ATP-b 98.61
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 98.61
PRK11629233 lolD lipoprotein transporter ATP-binding subunit; 98.61
TIGR02211221 LolD_lipo_ex lipoprotein releasing system, ATP-bin 98.6
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 98.6
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 98.6
TIGR01288303 nodI ATP-binding ABC transporter family nodulation 98.6
TIGR03265353 PhnT2 putative 2-aminoethylphosphonate ABC transpo 98.6
cd03218232 ABC_YhbG The ABC transporters belonging to the Yhb 98.6
PRK13637287 cbiO cobalt transporter ATP-binding subunit; Provi 98.6
PRK11153343 metN DL-methionine transporter ATP-binding subunit 98.6
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 98.59
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 98.59
PRK11248255 tauB taurine transporter ATP-binding subunit; Prov 98.59
cd03254229 ABCC_Glucan_exporter_like Glucan exporter ATP-bind 98.59
PRK13652277 cbiO cobalt transporter ATP-binding subunit; Provi 98.59
PRK09452375 potA putrescine/spermidine ABC transporter ATPase 98.59
PRK13643288 cbiO cobalt transporter ATP-binding subunit; Provi 98.58
PRK14247250 phosphate ABC transporter ATP-binding protein; Pro 98.58
PRK13638271 cbiO cobalt transporter ATP-binding subunit; Provi 98.58
PRK14250241 phosphate ABC transporter ATP-binding protein; Pro 98.58
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 98.58
PRK10895241 lipopolysaccharide ABC transporter ATP-binding pro 98.58
TIGR02769265 nickel_nikE nickel import ATP-binding protein NikE 98.58
PRK13634290 cbiO cobalt transporter ATP-binding subunit; Provi 98.58
PRK10851353 sulfate/thiosulfate transporter subunit; Provision 98.58
PRK13644274 cbiO cobalt transporter ATP-binding subunit; Provi 98.58
PRK15056272 manganese/iron transporter ATP-binding protein; Pr 98.58
COG1122235 CbiO ABC-type cobalt transport system, ATPase comp 98.58
PRK13639275 cbiO cobalt transporter ATP-binding subunit; Provi 98.58
TIGR01186363 proV glycine betaine/L-proline transport ATP bindi 98.58
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 98.57
PRK11607377 potG putrescine transporter ATP-binding subunit; P 98.57
PRK13632271 cbiO cobalt transporter ATP-binding subunit; Provi 98.57
PRK10247225 putative ABC transporter ATP-binding protein YbbL; 98.57
PRK11000369 maltose/maltodextrin transporter ATP-binding prote 98.57
PRK13536340 nodulation factor exporter subunit NodI; Provision 98.57
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 98.57
PRK14267253 phosphate ABC transporter ATP-binding protein; Pro 98.56
TIGR03258362 PhnT 2-aminoethylphosphonate ABC transport system, 98.56
TIGR03410230 urea_trans_UrtE urea ABC transporter, ATP-binding 98.56
PRK10584228 putative ABC transporter ATP-binding protein YbbA; 98.56
PRK13641287 cbiO cobalt transporter ATP-binding subunit; Provi 98.56
cd03250204 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. 98.56
COG4167267 SapF ABC-type antimicrobial peptide transport syst 98.56
cd03233202 ABC_PDR_domain1 The pleiotropic drug resistance (P 98.56
PRK14271276 phosphate ABC transporter ATP-binding protein; Pro 98.56
cd03260227 ABC_PstB_phosphate_transporter Phosphate uptake is 98.56
cd03301213 ABC_MalK_N The N-terminal ATPase domain of the mal 98.56
cd03295242 ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin 98.55
TIGR03005252 ectoine_ehuA ectoine/hydroxyectoine ABC transporte 98.55
cd03253236 ABCC_ATM1_transporter ATM1 is an ABC transporter t 98.55
PRK14237267 phosphate transporter ATP-binding protein; Provisi 98.55
cd03247178 ABCC_cytochrome_bd The CYD subfamily implicated in 98.55
PRK13651305 cobalt transporter ATP-binding subunit; Provisiona 98.55
PRK14273254 phosphate ABC transporter ATP-binding protein; Pro 98.55
PRK14262250 phosphate ABC transporter ATP-binding protein; Pro 98.54
PRK13636283 cbiO cobalt transporter ATP-binding subunit; Provi 98.54
PRK13635279 cbiO cobalt transporter ATP-binding subunit; Provi 98.54
cd03252237 ABCC_Hemolysin The ABC-transporter hemolysin B is 98.54
PRK11264250 putative amino-acid ABC transporter ATP-binding pr 98.54
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 98.54
cd03228171 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein 98.54
PRK10253265 iron-enterobactin transporter ATP-binding protein; 98.54
PRK13649280 cbiO cobalt transporter ATP-binding subunit; Provi 98.54
PRK11247257 ssuB aliphatic sulfonates transport ATP-binding su 98.54
PRK13540200 cytochrome c biogenesis protein CcmA; Provisional 98.54
cd03230173 ABC_DR_subfamily_A This family of ATP-binding prot 98.53
PRK14240250 phosphate transporter ATP-binding protein; Provisi 98.53
cd03246173 ABCC_Protease_Secretion This family represents the 98.53
cd03251234 ABCC_MsbA MsbA is an essential ABC transporter, cl 98.53
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 98.53
PRK13648269 cbiO cobalt transporter ATP-binding subunit; Provi 98.53
PRK09493240 glnQ glutamine ABC transporter ATP-binding protein 98.53
cd03245220 ABCC_bacteriocin_exporters ABC-type bacteriocin ex 98.53
TIGR03522301 GldA_ABC_ATP gliding motility-associated ABC trans 98.53
PRK15112267 antimicrobial peptide ABC system ATP-binding prote 98.52
COG0410237 LivF ABC-type branched-chain amino acid transport 98.52
cd03249238 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) 98.52
PRK13650279 cbiO cobalt transporter ATP-binding subunit; Provi 98.52
COG4152300 ABC-type uncharacterized transport system, ATPase 98.52
PRK14269246 phosphate ABC transporter ATP-binding protein; Pro 98.52
COG4559259 ABC-type hemin transport system, ATPase component 98.52
PRK11022326 dppD dipeptide transporter ATP-binding subunit; Pr 98.52
PRK10575265 iron-hydroxamate transporter ATP-binding subunit; 98.52
COG4555245 NatA ABC-type Na+ transport system, ATPase compone 98.52
PRK14241258 phosphate transporter ATP-binding protein; Provisi 98.52
cd03264211 ABC_drug_resistance_like ABC-type multidrug transp 98.51
cd03369207 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty 98.51
PRK14242253 phosphate transporter ATP-binding protein; Provisi 98.51
TIGR01978243 sufC FeS assembly ATPase SufC. SufC is part of the 98.51
PRK15093330 antimicrobial peptide ABC transporter ATP-binding 98.51
PRK11701258 phnK phosphonate C-P lyase system protein PhnK; Pr 98.51
TIGR00972247 3a0107s01c2 phosphate ABC transporter, ATP-binding 98.51
TIGR01189198 ccmA heme ABC exporter, ATP-binding protein CcmA. 98.51
cd03290218 ABCC_SUR1_N The SUR domain 1. The sulfonylurea rec 98.5
PRK13633280 cobalt transporter ATP-binding subunit; Provisiona 98.5
cd03214180 ABC_Iron-Siderophores_B12_Hemin ABC transporters, 98.5
PRK10744260 pstB phosphate transporter ATP-binding protein; Pr 98.5
PRK14270251 phosphate ABC transporter ATP-binding protein; Pro 98.5
cd03294269 ABC_Pro_Gly_Bertaine This family comprises the gly 98.5
PRK14272252 phosphate ABC transporter ATP-binding protein; Pro 98.5
PRK14253249 phosphate ABC transporter ATP-binding protein; Pro 98.5
PRK13538204 cytochrome c biogenesis protein CcmA; Provisional 98.5
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 98.5
cd03232192 ABC_PDR_domain2 The pleiotropic drug resistance-li 98.5
PRK13645289 cbiO cobalt transporter ATP-binding subunit; Provi 98.5
cd03215182 ABC_Carb_Monos_II This family represents domain II 98.5
PRK10418254 nikD nickel transporter ATP-binding protein NikD; 98.5
PRK14235267 phosphate transporter ATP-binding protein; Provisi 98.49
cd03213194 ABCG_EPDR ABCG transporters are involved in eye pi 98.49
TIGR03797686 NHPM_micro_ABC2 NHPM bacteriocin system ABC transp 98.49
PRK13539207 cytochrome c biogenesis protein CcmA; Provisional 98.49
PRK10619257 histidine/lysine/arginine/ornithine transporter su 98.49
cd03298211 ABC_ThiQ_thiamine_transporter ABC-type thiamine tr 98.49
cd03248226 ABCC_TAP TAP, the Transporter Associated with Anti 98.49
PRK09984262 phosphonate/organophosphate ester transporter subu 98.49
PRK14256252 phosphate ABC transporter ATP-binding protein; Pro 98.49
PRK13548258 hmuV hemin importer ATP-binding subunit; Provision 98.49
TIGR03411242 urea_trans_UrtD urea ABC transporter, ATP-binding 98.49
PRK10419268 nikE nickel transporter ATP-binding protein NikE; 98.48
cd03216163 ABC_Carb_Monos_I This family represents the domain 98.48
cd03244221 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. 98.48
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 98.48
PRK14274259 phosphate ABC transporter ATP-binding protein; Pro 98.48
PRK14259269 phosphate ABC transporter ATP-binding protein; Pro 98.48
KOG0056|consensus790 98.48
PRK14268258 phosphate ABC transporter ATP-binding protein; Pro 98.48
TIGR02982220 heterocyst_DevA ABC exporter ATP-binding subunit, 98.48
PRK14239252 phosphate transporter ATP-binding protein; Provisi 98.48
smart0078583 AARP2CN AARP2CN (NUC121) domain. This domain is th 98.48
TIGR03873256 F420-0_ABC_ATP proposed F420-0 ABC transporter, AT 98.47
TIGR02323253 CP_lyasePhnK phosphonate C-P lyase system protein 98.47
TIGR02770230 nickel_nikD nickel import ATP-binding protein NikD 98.47
TIGR03740223 galliderm_ABC gallidermin-class lantibiotic protec 98.47
PRK13640282 cbiO cobalt transporter ATP-binding subunit; Provi 98.47
PRK11231255 fecE iron-dicitrate transporter ATP-binding subuni 98.47
PRK09544251 znuC high-affinity zinc transporter ATPase; Review 98.47
COG4525259 TauB ABC-type taurine transport system, ATPase com 98.47
PRK11174588 cysteine/glutathione ABC transporter membrane/ATP- 98.47
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 98.46
cd03231201 ABC_CcmA_heme_exporter CcmA, the ATP-binding compo 98.46
PRK14255252 phosphate ABC transporter ATP-binding protein; Pro 98.46
PRK14251251 phosphate ABC transporter ATP-binding protein; Pro 98.46
PRK13631320 cbiO cobalt transporter ATP-binding subunit; Provi 98.46
PRK11614237 livF leucine/isoleucine/valine transporter ATP-bin 98.46
PRK11300255 livG leucine/isoleucine/valine transporter ATP-bin 98.46
PRK10070400 glycine betaine transporter ATP-binding subunit; P 98.46
PRK13549506 xylose transporter ATP-binding subunit; Provisiona 98.46
TIGR01184230 ntrCD nitrate transport ATP-binding subunits C and 98.45
PRK14243264 phosphate transporter ATP-binding protein; Provisi 98.45
COG4181228 Predicted ABC-type transport system involved in ly 98.45
COG1132567 MdlB ABC-type multidrug transport system, ATPase a 98.45
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 98.45
PRK14261253 phosphate ABC transporter ATP-binding protein; Pro 98.45
TIGR01193708 bacteriocin_ABC ABC-type bacteriocin transporter. 98.45
PRK14245250 phosphate ABC transporter ATP-binding protein; Pro 98.45
cd03221144 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is 98.45
PRK14238271 phosphate transporter ATP-binding protein; Provisi 98.45
PRK09473330 oppD oligopeptide transporter ATP-binding componen 98.45
PRK10771232 thiQ thiamine transporter ATP-binding subunit; Pro 98.44
TIGR03796710 NHPM_micro_ABC1 NHPM bacteriocin system ABC transp 98.44
COG4618580 ArpD ABC-type protease/lipase transport system, AT 98.44
PRK13642277 cbiO cobalt transporter ATP-binding subunit; Provi 98.44
cd03267236 ABC_NatA_like Similar in sequence to NatA, this is 98.44
PRK14244251 phosphate ABC transporter ATP-binding protein; Pro 98.44
PRK14260259 phosphate ABC transporter ATP-binding protein; Pro 98.44
TIGR02324224 CP_lyasePhnL phosphonate C-P lyase system protein 98.44
PRK09536402 btuD corrinoid ABC transporter ATPase; Reviewed 98.43
cd03288257 ABCC_SUR2 The SUR domain 2. The sulfonylurea recep 98.43
PRK13547272 hmuV hemin importer ATP-binding subunit; Provision 98.43
PRK13543214 cytochrome c biogenesis protein CcmA; Provisional 98.43
TIGR01277213 thiQ thiamine ABC transporter, ATP-binding protein 98.43
PRK10790592 putative multidrug transporter membrane\ATP-bindin 98.43
PRK14248268 phosphate ABC transporter ATP-binding protein; Pro 98.42
PRK14263261 phosphate ABC transporter ATP-binding protein; Pro 98.42
TIGR02857529 CydD thiol reductant ABC exporter, CydD subunit. U 98.42
PRK13541195 cytochrome c biogenesis protein CcmA; Provisional 98.42
PRK14265274 phosphate ABC transporter ATP-binding protein; Pro 98.42
cd03217200 ABC_FeS_Assembly ABC-type transport system involve 98.42
COG4586325 ABC-type uncharacterized transport system, ATPase 98.41
PRK09580248 sufC cysteine desulfurase ATPase component; Review 98.41
COG4988559 CydD ABC-type transport system involved in cytochr 98.41
PRK14254285 phosphate ABC transporter ATP-binding protein; Pro 98.41
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 98.41
PRK11160574 cysteine/glutathione ABC transporter membrane/ATP- 98.41
PRK11176582 lipid transporter ATP-binding/permease protein; Pr 98.41
cd03234226 ABCG_White The White subfamily represents ABC tran 98.4
PF00005137 ABC_tran: ABC transporter This structure is on hol 98.4
TIGR02633500 xylG D-xylose ABC transporter, ATP-binding protein 98.4
TIGR03415382 ABC_choXWV_ATP choline ABC transporter, ATP-bindin 98.4
PRK14249251 phosphate ABC transporter ATP-binding protein; Pro 98.4
PRK13657588 cyclic beta-1,2-glucan ABC transporter; Provisiona 98.4
TIGR02142354 modC_ABC molybdenum ABC transporter, ATP-binding p 98.39
cd03300232 ABC_PotA_N PotA is an ABC-type transporter and the 98.39
PRK10762501 D-ribose transporter ATP binding protein; Provisio 98.39
PRK11819556 putative ABC transporter ATP-binding protein; Revi 98.39
cd03299235 ABC_ModC_like Archeal protein closely related to M 98.39
TIGR03375694 type_I_sec_LssB type I secretion system ATPase, Ls 98.38
TIGR03771223 anch_rpt_ABC anchored repeat-type ABC transporter, 98.38
PRK14252265 phosphate ABC transporter ATP-binding protein; Pro 98.38
COG1123539 ATPase components of various ABC-type transport sy 98.38
COG1134249 TagH ABC-type polysaccharide/polyol phosphate tran 98.38
PRK11144352 modC molybdate transporter ATP-binding protein; Pr 98.38
PRK15177213 Vi polysaccharide export ATP-binding protein VexC; 98.37
PRK10938490 putative molybdenum transport ATP-binding protein 98.37
PRK14275286 phosphate ABC transporter ATP-binding protein; Pro 98.36
KOG0057|consensus591 98.36
CHL00131252 ycf16 sulfate ABC transporter protein; Validated 98.36
PRK09700510 D-allose transporter ATP-binding protein; Provisio 98.36
TIGR00958711 3a01208 Conjugate Transporter-2 (CT2) Family prote 98.36
KOG0058|consensus716 98.35
cd03291282 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic 98.35
PRK03695248 vitamin B12-transporter ATPase; Provisional 98.34
COG3845501 ABC-type uncharacterized transport systems, ATPase 98.34
PRK14266250 phosphate ABC transporter ATP-binding protein; Pro 98.34
PRK15134529 microcin C ABC transporter ATP-binding protein Yej 98.34
PRK09700510 D-allose transporter ATP-binding protein; Provisio 98.34
PRK14257329 phosphate ABC transporter ATP-binding protein; Pro 98.33
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 98.33
PRK10261623 glutathione transporter ATP-binding protein; Provi 98.33
PRK14236272 phosphate transporter ATP-binding protein; Provisi 98.33
TIGR03719552 ABC_ABC_ChvD ATP-binding cassette protein, ChvD fa 98.33
PRK15064530 ABC transporter ATP-binding protein; Provisional 98.32
PRK14264305 phosphate ABC transporter ATP-binding protein; Pro 98.32
PRK15439510 autoinducer 2 ABC transporter ATP-binding protein 98.32
TIGR02204576 MsbA_rel ABC transporter, permease/ATP-binding pro 98.31
cd03289275 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic 98.31
PRK10522547 multidrug transporter membrane component/ATP-bindi 98.31
TIGR00968237 3a0106s01 sulfate ABC transporter, ATP-binding pro 98.31
PRK10982491 galactose/methyl galaxtoside transporter ATP-bindi 98.31
TIGR02203571 MsbA_lipidA lipid A export permease/ATP-binding pr 98.3
PRK11288501 araG L-arabinose transporter ATP-binding protein; 98.3
COG4133209 CcmA ABC-type transport system involved in cytochr 98.3
cd03220224 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo 98.29
COG4598256 HisP ABC-type histidine transport system, ATPase c 98.29
PRK10261623 glutathione transporter ATP-binding protein; Provi 98.29
PRK14246257 phosphate ABC transporter ATP-binding protein; Pro 98.29
cd03237246 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o 98.28
PRK14258261 phosphate ABC transporter ATP-binding protein; Pro 98.28
PRK10789569 putative multidrug transporter membrane\ATP-bindin 98.27
COG4175386 ProV ABC-type proline/glycine betaine transport sy 98.27
COG1119257 ModF ABC-type molybdenum transport system, ATPase 98.27
TIGR01192585 chvA glucan exporter ATP-binding protein. This mod 98.27
TIGR01842544 type_I_sec_PrtD type I secretion system ABC transp 98.27
PRK13546264 teichoic acids export protein ATP-binding subunit; 98.26
cd00267157 ABC_ATPase ABC (ATP-binding cassette) transporter 98.25
TIGR01846694 type_I_sec_HlyB type I secretion system ABC transp 98.25
COG4604252 CeuD ABC-type enterochelin transport system, ATPas 98.25
TIGR02633500 xylG D-xylose ABC transporter, ATP-binding protein 98.24
KOG1980|consensus 754 98.24
PRK10762501 D-ribose transporter ATP binding protein; Provisio 98.23
PRK13549506 xylose transporter ATP-binding subunit; Provisiona 98.23
cd03236255 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 o 98.23
COG4987573 CydC ABC-type transport system involved in cytochr 98.23
PRK15064530 ABC transporter ATP-binding protein; Provisional 98.22
TIGR03269520 met_CoM_red_A2 methyl coenzyme M reductase system, 98.22
PRK15134529 microcin C ABC transporter ATP-binding protein Yej 98.21
PRK11288501 araG L-arabinose transporter ATP-binding protein; 98.2
COG0396251 sufC Cysteine desulfurase activator ATPase [Posttr 98.2
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 98.2
PRK10982491 galactose/methyl galaxtoside transporter ATP-bindi 98.19
PF0814285 AARP2CN: AARP2CN (NUC121) domain; InterPro: IPR012 98.19
PRK15439510 autoinducer 2 ABC transporter ATP-binding protein 98.19
PRK10938490 putative molybdenum transport ATP-binding protein 98.18
KOG0055|consensus1228 98.18
COG4615546 PvdE ABC-type siderophore export system, fused ATP 98.18
TIGR01194555 cyc_pep_trnsptr cyclic peptide transporter. This m 98.17
PLN03073718 ABC transporter F family; Provisional 98.16
COG1129500 MglA ABC-type sugar transport system, ATPase compo 98.16
PRK10636638 putative ABC transporter ATP-binding protein; Prov 98.16
COG4136213 ABC-type uncharacterized transport system, ATPase 98.16
PRK11147635 ABC transporter ATPase component; Reviewed 98.15
TIGR03269520 met_CoM_red_A2 methyl coenzyme M reductase system, 98.15
PRK11147635 ABC transporter ATPase component; Reviewed 98.15
PTZ002651466 multidrug resistance protein (mdr1); Provisional 98.14
TIGR00954659 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FA 98.14
PRK10636638 putative ABC transporter ATP-binding protein; Prov 98.14
TIGR03719552 ABC_ABC_ChvD ATP-binding cassette protein, ChvD fa 98.13
PRK11819556 putative ABC transporter ATP-binding protein; Revi 98.12
PLN03211659 ABC transporter G-25; Provisional 98.12
COG0444316 DppD ABC-type dipeptide/oligopeptide/nickel transp 98.11
PLN031301622 ABC transporter C family member; Provisional 98.11
TIGR012572272 rim_protein retinal-specific rim ABC transporter. 98.11
COG1101263 PhnK ABC-type uncharacterized transport system, AT 98.1
PTZ002431560 ABC transporter; Provisional 98.1
PLN032321495 ABC transporter C family member; Provisional 98.09
PTZ00265 1466 multidrug resistance protein (mdr1); Provisional 98.08
COG1137243 YhbG ABC-type (unclassified) transport system, ATP 98.07
PRK13545549 tagH teichoic acids export protein ATP-binding sub 98.05
COG4148352 ModC ABC-type molybdate transport system, ATPase c 98.05
COG4161242 ArtP ABC-type arginine transport system, ATPase co 98.03
cd03238176 ABC_UvrA The excision repair protein UvrA; Nucleot 98.03
TIGR009571522 MRP_assoc_pro multi drug resistance-associated pro 98.02
PRK13409590 putative ATPase RIL; Provisional 98.02
TIGR01257 2272 rim_protein retinal-specific rim ABC transporter. 98.02
TIGR03238504 dnd_assoc_3 dnd system-associated protein 3. cereu 98.01
PRK10535648 macrolide transporter ATP-binding /permease protei 97.98
PRK13409590 putative ATPase RIL; Provisional 97.98
COG4107258 PhnK ABC-type phosphonate transport system, ATPase 97.96
COG1123539 ATPase components of various ABC-type transport sy 97.94
TIGR00955617 3a01204 The Eye Pigment Precursor Transporter (EPP 97.93
cd03278197 ABC_SMC_barmotin Barmotin is a tight junction-asso 97.92
PF02724622 CDC45: CDC45-like protein; InterPro: IPR003874 CDC 97.92
COG4138248 BtuD ABC-type cobalamin transport system, ATPase c 97.9
KOG0055|consensus1228 97.89
PLN03140 1470 ABC transporter G family member; Provisional 97.86
TIGR012711490 CFTR_protein cystic fibrosis transmembrane conduct 97.85
cd00820107 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC 97.85
COG0488530 Uup ATPase components of ABC transporters with dup 97.83
TIGR01271 1490 CFTR_protein cystic fibrosis transmembrane conduct 97.82
COG4674249 Uncharacterized ABC-type transport system, ATPase 97.81
COG5265497 ATM1 ABC-type transport system involved in Fe-S cl 97.81
PLN031401470 ABC transporter G family member; Provisional 97.8
COG4778235 PhnL ABC-type phosphonate transport system, ATPase 97.79
TIGR009561394 3a01205 Pleiotropic Drug Resistance (PDR) Family p 97.77
TIGR00957 1522 MRP_assoc_pro multi drug resistance-associated pro 97.76
PLN03232 1495 ABC transporter C family member; Provisional 97.76
TIGR00956 1394 3a01205 Pleiotropic Drug Resistance (PDR) Family p 97.72
PLN03130 1622 ABC transporter C family member; Provisional 97.71
PLN03073718 ABC transporter F family; Provisional 97.7
COG4172534 ABC-type uncharacterized transport system, duplica 97.7
TIGR01187325 potA spermidine/putrescine ABC transporter ATP-bin 97.67
PTZ00243 1560 ABC transporter; Provisional 97.64
COG0488530 Uup ATPase components of ABC transporters with dup 97.63
cd03270226 ABC_UvrA_I The excision repair protein UvrA domain 97.6
KOG0061|consensus613 97.59
KOG0059|consensus885 97.38
cd03279213 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complex 97.36
cd01130186 VirB11-like_ATPase Type IV secretory pathway compo 97.35
cd01882225 BMS1 Bms1. Bms1 is an essential, evolutionarily co 97.33
TIGR00235207 udk uridine kinase. Model contains a number of lon 97.33
PRK10078186 ribose 1,5-bisphosphokinase; Provisional 97.31
COG4172534 ABC-type uncharacterized transport system, duplica 97.26
cd03283199 ABC_MutS-like MutS-like homolog in eukaryotes. The 97.25
KOG1832|consensus1516 97.25
COG4178604 ABC-type uncharacterized transport system, permeas 97.25
PRK00300205 gmk guanylate kinase; Provisional 97.24
PRK09825176 idnK D-gluconate kinase; Provisional 97.22
cd03272243 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC protein 97.22
cd03240204 ABC_Rad50 The catalytic domains of Rad50 are simil 97.18
KOG0054|consensus1381 97.14
KOG0927|consensus614 97.09
cd03280200 ABC_MutS2 MutS2 homologs in bacteria and eukaryote 97.07
KOG0066|consensus807 97.06
cd03243202 ABC_MutS_homologs The MutS protein initiates DNA m 97.04
cd03274212 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC protein 97.04
cd03273251 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC protein 97.04
TIGR03263180 guanyl_kin guanylate kinase. Members of this famil 97.0
COG2401593 ABC-type ATPase fused to a predicted acetyltransfe 96.98
KOG0064|consensus728 96.92
TIGR02322179 phosphon_PhnN phosphonate metabolism protein/1,5-b 96.92
PF1355562 AAA_29: P-loop containing region of AAA domain 96.91
KOG0054|consensus1381 96.9
KOG0065|consensus1391 96.89
PRK09270229 nucleoside triphosphate hydrolase domain-containin 96.89
PF04931784 DNA_pol_phi: DNA polymerase phi; InterPro: IPR0070 96.86
KOG2355|consensus291 96.77
KOG0927|consensus614 96.76
KOG0060|consensus659 96.74
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 96.66
COG1245591 Predicted ATPase, RNase L inhibitor (RLI) homolog 96.63
PRK05480209 uridine/cytidine kinase; Provisional 96.63
PRK07196434 fliI flagellum-specific ATP synthase; Validated 96.61
COG5177 769 Uncharacterized conserved protein [Function unknow 96.6
TIGR02858270 spore_III_AA stage III sporulation protein AA. Mem 96.59
TIGR00554290 panK_bact pantothenate kinase, bacterial type. Sho 96.57
cd03282204 ABC_MSH4_euk MutS4 homolog in eukaryotes. The MutS 96.57
PRK06002450 fliI flagellum-specific ATP synthase; Validated 96.55
cd03271261 ABC_UvrA_II The excision repair protein UvrA domai 96.55
cd03275247 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC protein 96.49
smart00382148 AAA ATPases associated with a variety of cellular 96.48
PRK08149428 ATP synthase SpaL; Validated 96.48
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 96.45
PRK03846198 adenylylsulfate kinase; Provisional 96.45
PF03193161 DUF258: Protein of unknown function, DUF258; Inter 96.45
COG1245591 Predicted ATPase, RNase L inhibitor (RLI) homolog 96.43
PRK07960455 fliI flagellum-specific ATP synthase; Validated 96.37
TIGR02788308 VirB11 P-type DNA transfer ATPase VirB11. The VirB 96.34
cd00071137 GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. 96.33
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 96.29
PRK14721420 flhF flagellar biosynthesis regulator FlhF; Provis 96.27
cd02026273 PRK Phosphoribulokinase (PRK) is an enzyme involve 96.24
cd01136326 ATPase_flagellum-secretory_path_III Flagellum-spec 96.23
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 96.23
PRK08972444 fliI flagellum-specific ATP synthase; Validated 96.15
PF01926116 MMR_HSR1: 50S ribosome-binding GTPase; InterPro: I 96.1
TIGR01360188 aden_kin_iso1 adenylate kinase, isozyme 1 subfamil 96.1
PRK06995484 flhF flagellar biosynthesis regulator FlhF; Valida 96.08
TIGR03498418 FliI_clade3 flagellar protein export ATPase FliI. 96.08
PF10446458 DUF2457: Protein of unknown function (DUF2457); In 96.07
PRK00098298 GTPase RsgA; Reviewed 96.05
cd03284216 ABC_MutS1 MutS1 homolog in eukaryotes. The MutS pr 96.02
PRK07721438 fliI flagellum-specific ATP synthase; Validated 96.02
cd04159159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was id 96.0
KOG0461|consensus522 95.98
cd04155173 Arl3 Arl3 subfamily. Arl3 (Arf-like 3) is an Arf f 95.93
cd01854287 YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtil 95.92
PRK10416318 signal recognition particle-docking protein FtsY; 95.92
TIGR00150133 HI0065_YjeE ATPase, YjeE family. Members of this f 95.9
PLN02796347 D-glycerate 3-kinase 95.87
TIGR01026440 fliI_yscN ATPase FliI/YscN family. This family of 95.84
cd04104197 p47_IIGP_like p47 (47-kDa) family. The p47 GTPase 95.83
PRK05541176 adenylylsulfate kinase; Provisional 95.81
PRK05688451 fliI flagellum-specific ATP synthase; Validated 95.8
PRK00889175 adenylylsulfate kinase; Provisional 95.79
PRK01889356 GTPase RsgA; Reviewed 95.79
PRK05922434 type III secretion system ATPase; Validated 95.78
KOG2773|consensus483 95.75
PRK10751173 molybdopterin-guanine dinucleotide biosynthesis pr 95.75
cd03287222 ABC_MSH3_euk MutS3 homolog in eukaryotes. The MutS 95.74
TIGR02546422 III_secr_ATP type III secretion apparatus H+-trans 95.73
PRK14738206 gmk guanylate kinase; Provisional 95.73
cd01876170 YihA_EngB The YihA (EngB) subfamily. This subfamil 95.66
KOG0062|consensus582 95.64
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 95.63
PF13671143 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 95.62
COG0194191 Gmk Guanylate kinase [Nucleotide transport and met 95.61
PRK08233182 hypothetical protein; Provisional 95.61
PRK07594433 type III secretion system ATPase SsaN; Validated 95.59
PF13304303 AAA_21: AAA domain; PDB: 3QKS_B 1US8_B 1F2U_B 1F2T 95.54
PF08477119 Miro: Miro-like protein; InterPro: IPR013684 Mitoc 95.54
PRK09099441 type III secretion system ATPase; Provisional 95.54
TIGR03496411 FliI_clade1 flagellar protein export ATPase FliI. 95.51
PRK08927442 fliI flagellum-specific ATP synthase; Validated 95.47
TIGR00767415 rho transcription termination factor Rho. Members 95.46
cd01128249 rho_factor Transcription termination factor rho is 95.44
cd03227162 ABC_Class2 ABC-type Class 2 contains systems invol 95.44
PRK08533230 flagellar accessory protein FlaH; Reviewed 95.43
PLN02318656 phosphoribulokinase/uridine kinase 95.41
PRK07261171 topology modulation protein; Provisional 95.41
cd0201969 NK Nucleoside/nucleotide kinase (NK) is a protein 95.4
TIGR00455184 apsK adenylylsulfate kinase (apsK). Important resi 95.39
PF13476202 AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V 95.39
PRK09862506 putative ATP-dependent protease; Provisional 95.37
cd04163168 Era Era subfamily. Era (E. coli Ras-like protein) 95.37
cd04164157 trmE TrmE (MnmE, ThdF, MSS1) is a 3-domain protein 95.36
PRK14722374 flhF flagellar biosynthesis regulator FlhF; Provis 95.35
cd01898170 Obg Obg subfamily. The Obg nucleotide binding prot 95.28
PRK06936439 type III secretion system ATPase; Provisional 95.28
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 95.27
PF10662143 PduV-EutP: Ethanolamine utilisation - propanediol 95.26
PRK14737186 gmk guanylate kinase; Provisional 95.25
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 95.25
PLN02165334 adenylate isopentenyltransferase 95.25
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-113  Score=972.03  Aligned_cols=602  Identities=31%  Similarity=0.516  Sum_probs=496.3

Q ss_pred             CcccccCCCCcccccccCChHHHHHHHHHHHHHHhhhccCccccccCCcccccccccCCCCcchhhhhhhhhhhhhhccC
Q psy5893         316 EPKTHKDSKNPEEDTGLNWKSDLAQKAASAFLERQANIVNLAKYVYGDMEDVSVTMEGDEAPNKKVHRKRQAELTAKQKN  395 (1182)
Q Consensus       316 e~~~~~~~d~~rE~~~~~~k~~la~ka~eay~~rq~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  395 (1182)
                      +.....++...++.+.+.|++.||.+  -+|.+...+..|++|++|.+...|..-..+=.++.            +....
T Consensus       463 ~~a~dsDSqfdese~~~~w~~~~a~k--l~~sqs~kr~~ni~ki~y~e~lspeeci~e~kge~------------~~s~e  528 (1077)
T COG5192         463 EVAFDSDSQFDESEGNLRWKEGLASK--LAYSQSGKRGRNIQKIFYDESLSPEECIEEYKGES------------AKSSE  528 (1077)
T ss_pred             hhccccccccccccccchhhhhhhhh--hhhhhcccccccccceeccccCCHHHHHHHhcccc------------ccccc
Confidence            33355677778889999999999998  46777767779999999987766633332110000            00000


Q ss_pred             CCceeehhhhhcceeceeeeecccccccccccCCCCCCCCCcEEEEEcCCCCCHHHHHHHHHccCCCCCCcccccCcccc
Q psy5893         396 PKAFTFQSVIKGERKFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVTLI  475 (1182)
Q Consensus       396 pka~~~~~~~k~~~~~~~~~~~~~~k~~i~~vd~~~~i~~GeivaIvGpsGsGKSTLLrlL~Gl~~~~~~SGii~wdgeE  475 (1182)
                      ..- .++-.  ...+|++...... -+   .++..                           .|.+.........|..  
T Consensus       529 ~~~-v~~D~--~edff~vsk~~n~-~~---s~~~e---------------------------k~~~~~fe~L~kkw~s--  572 (1077)
T COG5192         529 SDL-VVQDE--PEDFFDVSKVANE-SI---SSNHE---------------------------KLMESEFEELKKKWSS--  572 (1077)
T ss_pred             ccc-ccccC--chhhhhhhhhccc-cc---ccchh---------------------------hhchhHHHHHHHHHhh--
Confidence            000 00000  0014443322110 00   01111                           1111000012223433  


Q ss_pred             cccccceeeecCcccccch-HHHhhhcCCCCCcccccCCccccccCcccCCCCCCCCCC-----CCCCCCCCCChhhHHH
Q psy5893         476 IKDSIRDCFVTGKWKASED-ASELLRLDDMDDDEELFGDFEDLETGEKHSGDKSGGGSG-----GVSGGGSGDDKPKTRA  549 (1182)
Q Consensus       476 LrdsIr~VFQTGkw~~~~~-~~~ll~~~~~~~d~e~~gdfedle~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  549 (1182)
                       .+.|..+||++....+.. .++|.+       |...|+|||||..|.....+-+++..     ..++..+.-+.+.++.
T Consensus       573 -~~~lk~RF~~~~~lds~eg~EEl~q-------d~E~gn~ed~~d~e~~~d~e~ees~G~s~t~~~~e~~~e~~~e~ErE  644 (1077)
T COG5192         573 -LAQLKSRFQKDATLDSIEGEEELIQ-------DDEKGNFEDLEDEENSSDNEMEESRGSSVTAENEESADEVDYETERE  644 (1077)
T ss_pred             -HHHHHHHhhcccccccccchhhhhh-------chhccCcccccccccccccchhhccCCcccccchhhccccchHHHhh
Confidence             567888999987654422 233332       23468999999877654332222111     1111112235677788


Q ss_pred             HHHHHHHhhhhhcccccCC-CCCCCCchHHHHHHHHHHHHHHhhhhhcccchhhhhhhcccCCCcEEEEEEecCChhhhh
Q psy5893         550 ELMEKKRKLKEQFDAEYDD-KDGGGNTYYDDLKTQATRQAELNRQQFHDLDDNARVELEGFRAGLYIRVELDGMPCELIE  628 (1182)
Q Consensus       550 ~~~~k~r~lK~~~~s~~d~-~e~~~~~~y~~~k~~~~~q~~~n~~~~~~~~~~~r~~~eg~~~G~yVri~i~~vp~~~~~  628 (1182)
                      +..+|+..|+..|.-+-.. .|.....||...|+.+.+|..+||.+|+.|++++|+.++||++|.||||+|+.||.+|+.
T Consensus       645 ~na~kKE~lr~~Fe~eer~d~e~~d~dwy~~eK~ki~~ql~inr~e~e~M~Pe~r~~Ieg~raG~YVriv~~~vP~efv~  724 (1077)
T COG5192         645 ENARKKEELRGNFELEERGDPEKKDVDWYTEEKRKIEEQLKINRSEFETMVPESRVVIEGYRAGRYVRIVLSHVPLEFVD  724 (1077)
T ss_pred             hhhhhhhhhhcceeehhccCccccccchHHHHHHHHHHHHhhhhhhhhhcCCcceeEeecccccceEEEEeccCCHHHHh
Confidence            8999999999999877643 344567799999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCceEEEecccccceeeEEEEEEEeccccccccccCCcEEEEecceeeeeecceecccCcceeeeeeccCCCceEE
Q psy5893         629 NFDPTYPLIVGGLQPGEETIGCVRARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACM  708 (1182)
Q Consensus       629 ~f~~~~plil~gLl~~E~k~~v~~~~ikrh~~~~~~lkskdpli~s~G~RRf~~~Piys~~~~n~r~k~lky~~~~~~c~  708 (1182)
                      +|++.||+|+|||||.|.++|+||.+|+|||||++|||++||||||+|||||||+||||+.+..+|+|||||||+||||.
T Consensus       725 ~fn~r~piV~GGlLp~E~~~giVq~rikrhrWhKKILKTNdPlifS~GWRRFQsiPvys~~DsrTRnRMlKYTPEhmhCn  804 (1077)
T COG5192         725 EFNSRYPIVLGGLLPAEKEMGIVQGRIKRHRWHKKILKTNDPLIFSVGWRRFQSIPVYSMKDSRTRNRMLKYTPEHMHCN  804 (1077)
T ss_pred             hcCCCCcEEeccccchhhhhhhhhhHHHHhHHHHHHhccCCCeEEEechhhhcccceeeecchhhhhhhhhcCccceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeecccCCceEEEEEecccCCCCcEEEEEEEEecCCCCceeeEeEEEeeceeEEeeceEEEeccCCChHhhccccCc
Q psy5893         709 AHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGA  788 (1182)
Q Consensus       709 atfygPi~~~~t~vl~~~~~~~~~~~~ri~atG~v~~~d~~~~i~Kki~LtG~P~KI~K~ta~Ir~MF~s~~eV~~F~~~  788 (1182)
                      +|||||+++|||||+++|+.   .+.|||+|+|+|.++|.+..|||||||+|||++|++||||||+||+|.+||++|+||
T Consensus       805 ~sFYGP~v~pntgFc~Vqse---~g~frv~a~g~i~dv~~~~~lvkklklvg~p~qi~qnt~fvrdmfts~lev~kfega  881 (1077)
T COG5192         805 VSFYGPVVPPNTGFCAVQSE---KGDFRVLALGTITDVNGDAKLVKKLKLVGYPKQIVQNTVFVRDMFTSDLEVLKFEGA  881 (1077)
T ss_pred             eeeecCccCCCCCceeEEec---CCceEEEEeeeeEeccccHHHHhhhhhccCcHHHhhhhHhHHHhhhhhhHHHhhccc
Confidence            99999999999999999984   456999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEeccCcCceeecccCCCCceeEEEeccccccCCEEEEeccccccCCcccccccccCCCCCcCCcccccchhhhHHHHh
Q psy5893         789 KIRTVSGIRGQIKKALNKPQGAFRATFEDKIMLSDIVFCRTWYKVDIPKLYNPVTSLLLPPEQKDSWTGMKTTGQLKRER  868 (1182)
Q Consensus       789 ~l~T~sGirG~IK~~lg~t~G~fka~Fe~ki~~~D~V~lr~~y~~~~pk~y~p~~~~~~~~~~~~~w~~m~~~~~lr~~~  868 (1182)
                      +|+||||+||+||.|+| .+|++||.|+++|+|||||.||+||||.+.+||+||++||+      .|+|+|.+||+|...
T Consensus       882 ~lk~vsglrgqvk~~~~-k~g~yra~fe~kmlmsdii~lr~~~pv~v~r~~~pv~~ll~------~wrglr~~~eir~sl  954 (1077)
T COG5192         882 SLKAVSGLRGQVKGPHG-KNGEYRAVFEGKMLMSDIITLRCFVPVEVHRIFIPVDNLLG------KWRGLRRLHEIRESL  954 (1077)
T ss_pred             ceeeeccccccccCccC-CCccchheeccchhhhheeeEEeeeeeEEEEeeccHHHHHH------HHhhhHHHHHHHHHh
Confidence            99999999999999997 69999999999999999999999999999999999999997      699999999999999


Q ss_pred             CCCCCCCCCCCCccccCCCCCCccccCChhhhhcCCCCCCccccCCCCCCCccccccCChhhHHHHHHHHHHHHhhHhHH
Q psy5893         869 GLHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKELPYHMKPKYKSKETPKPQRVAVIHSEREQKVASLMKMLRTNYSEKN  948 (1182)
Q Consensus       869 ~~~~~~~~ds~y~~i~r~~~~f~~l~ip~~l~~~lpf~~k~k~~~~~~~~~~~~av~~~~~e~k~~~l~~~l~t~~~~~~  948 (1182)
                      |+..|.+++|.|-.++|..++|+.+.+|+++|+.|||+      +++.+++.||+++.-|.|.|....+|..-++.+.|.
T Consensus       955 ~l~~~~~p~~~~~~~e~~~~~~~~~~~pr~ie~~lp~~------kr~~~~~srr~~~~~~~e~r~k~~ik~~i~~~r~kd 1028 (1077)
T COG5192         955 GLTHSYAPQNDSSSEEMGYGAEEDYSLPREIESKLPLD------KRSIAVVSRRIELPVPPECREKHEIKDRIVKERIKD 1028 (1077)
T ss_pred             CCCCCCCCCccchhhhhhccccccccCcHhHHhhCCcc------hhhhhheeeeeeccCChhhhHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999      334588999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy5893         949 SKEKQAMKARMVALKLRAKAAEEAKQQRQRVMKKDIFRTLRMP  991 (1182)
Q Consensus       949 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~k~~~k~i~rshG~p  991 (1182)
                      .++|++++-.++++.++.+|.|++|.+|.|+.+++.|...|..
T Consensus      1029 ~~~ke~~~s~~r~k~~~i~k~e~er~qr~r~~~~d~~~e~~kk 1071 (1077)
T COG5192        1029 QEEKERMESLQRAKEEEIGKKEKEREQRIRKTIHDNYKEMAKK 1071 (1077)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999988865

>PF04950 DUF663: Protein of unknown function (DUF663); InterPro: IPR007034 This domain is found at the C terminus of the ribosome biogenesis protein BMS1 and TSR1 families, which may act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus Back     alignment and domain information
>KOG1980|consensus Back     alignment and domain information
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG5177 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04950 DUF663: Protein of unknown function (DUF663); InterPro: IPR007034 This domain is found at the C terminus of the ribosome biogenesis protein BMS1 and TSR1 families, which may act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus Back     alignment and domain information
>KOG1951|consensus Back     alignment and domain information
>cd01882 BMS1 Bms1 Back     alignment and domain information
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0672|consensus Back     alignment and domain information
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] Back     alignment and domain information
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds Back     alignment and domain information
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) Back     alignment and domain information
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively Back     alignment and domain information
>PRK13537 nodulation ABC transporter NodI; Provisional Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>PRK10908 cell division protein FtsE; Provisional Back     alignment and domain information
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI Back     alignment and domain information
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids Back     alignment and domain information
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein Back     alignment and domain information
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed Back     alignment and domain information
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE Back     alignment and domain information
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional Back     alignment and domain information
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional Back     alignment and domain information
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13536 nodulation factor exporter subunit NodI; Provisional Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT Back     alignment and domain information
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE Back     alignment and domain information
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional Back     alignment and domain information
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C Back     alignment and domain information
>COG4167 SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient Back     alignment and domain information
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK Back     alignment and domain information
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment Back     alignment and domain information
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria Back     alignment and domain information
>PRK14237 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis Back     alignment and domain information
>PRK13651 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E Back     alignment and domain information
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export Back     alignment and domain information
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity Back     alignment and domain information
>PRK14240 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain Back     alignment and domain information
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters Back     alignment and domain information
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA Back     alignment and domain information
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional Back     alignment and domain information
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 Back     alignment and domain information
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14241 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component Back     alignment and domain information
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) Back     alignment and domain information
>PRK14242 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01978 sufC FeS assembly ATPase SufC Back     alignment and domain information
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional Back     alignment and domain information
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA Back     alignment and domain information
>cd03290 ABCC_SUR1_N The SUR domain 1 Back     alignment and domain information
>PRK13633 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea Back     alignment and domain information
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea Back     alignment and domain information
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional Back     alignment and domain information
>PRK14235 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) Back     alignment and domain information
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional Back     alignment and domain information
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP Back     alignment and domain information
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules Back     alignment and domain information
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional Back     alignment and domain information
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD Back     alignment and domain information
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional Back     alignment and domain information
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG0056|consensus Back     alignment and domain information
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family Back     alignment and domain information
>PRK14239 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>smart00785 AARP2CN AARP2CN (NUC121) domain Back     alignment and domain information
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK Back     alignment and domain information
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD Back     alignment and domain information
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit Back     alignment and domain information
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed Back     alignment and domain information
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter Back     alignment and domain information
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13549 xylose transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D Back     alignment and domain information
>PRK14243 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter Back     alignment and domain information
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth Back     alignment and domain information
>PRK14238 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional Back     alignment and domain information
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein Back     alignment and domain information
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] Back     alignment and domain information
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake Back     alignment and domain information
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL Back     alignment and domain information
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed Back     alignment and domain information
>cd03288 ABCC_SUR2 The SUR domain 2 Back     alignment and domain information
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit Back     alignment and domain information
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component Back     alignment and domain information
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed Back     alignment and domain information
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional Back     alignment and domain information
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors Back     alignment and domain information
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems Back     alignment and domain information
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein Back     alignment and domain information
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional Back     alignment and domain information
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D Back     alignment and domain information
>PRK10762 D-ribose transporter ATP binding protein; Provisional Back     alignment and domain information
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>cd03299 ABC_ModC_like Archeal protein closely related to ModC Back     alignment and domain information
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family Back     alignment and domain information
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit Back     alignment and domain information
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional Back     alignment and domain information
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional Back     alignment and domain information
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG0057|consensus Back     alignment and domain information
>CHL00131 ycf16 sulfate ABC transporter protein; Validated Back     alignment and domain information
>PRK09700 D-allose transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein Back     alignment and domain information
>KOG0058|consensus Back     alignment and domain information
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1 Back     alignment and domain information
>PRK03695 vitamin B12-transporter ATPase; Provisional Back     alignment and domain information
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only] Back     alignment and domain information
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional Back     alignment and domain information
>PRK09700 D-allose transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>PRK10261 glutathione transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14236 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family Back     alignment and domain information
>PRK15064 ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional Back     alignment and domain information
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein Back     alignment and domain information
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 Back     alignment and domain information
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional Back     alignment and domain information
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA Back     alignment and domain information
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export Back     alignment and domain information
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10261 glutathione transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor Back     alignment and domain information
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01192 chvA glucan exporter ATP-binding protein Back     alignment and domain information
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family Back     alignment and domain information
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family Back     alignment and domain information
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein Back     alignment and domain information
>KOG1980|consensus Back     alignment and domain information
>PRK10762 D-ribose transporter ATP binding protein; Provisional Back     alignment and domain information
>PRK13549 xylose transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor Back     alignment and domain information
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15064 ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 Back     alignment and domain information
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional Back     alignment and domain information
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional Back     alignment and domain information
>PF08142 AARP2CN: AARP2CN (NUC121) domain; InterPro: IPR012948 This domain is the central domain of AARP2 (asparagine and aspartate rich protein 2) Back     alignment and domain information
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional Back     alignment and domain information
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional Back     alignment and domain information
>KOG0055|consensus Back     alignment and domain information
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter Back     alignment and domain information
>PLN03073 ABC transporter F family; Provisional Back     alignment and domain information
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10636 putative ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK11147 ABC transporter ATPase component; Reviewed Back     alignment and domain information
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 Back     alignment and domain information
>PRK11147 ABC transporter ATPase component; Reviewed Back     alignment and domain information
>PTZ00265 multidrug resistance protein (mdr1); Provisional Back     alignment and domain information
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei Back     alignment and domain information
>PRK10636 putative ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family Back     alignment and domain information
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>PLN03211 ABC transporter G-25; Provisional Back     alignment and domain information
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03130 ABC transporter C family member; Provisional Back     alignment and domain information
>TIGR01257 rim_protein retinal-specific rim ABC transporter Back     alignment and domain information
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PTZ00243 ABC transporter; Provisional Back     alignment and domain information
>PLN03232 ABC transporter C family member; Provisional Back     alignment and domain information
>PTZ00265 multidrug resistance protein (mdr1); Provisional Back     alignment and domain information
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP) Back     alignment and domain information
>PRK13409 putative ATPase RIL; Provisional Back     alignment and domain information
>TIGR01257 rim_protein retinal-specific rim ABC transporter Back     alignment and domain information
>TIGR03238 dnd_assoc_3 dnd system-associated protein 3 Back     alignment and domain information
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional Back     alignment and domain information
>PRK13409 putative ATPase RIL; Provisional Back     alignment and domain information
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein Back     alignment and domain information
>cd03278 ABC_SMC_barmotin Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function Back     alignment and domain information
>PF02724 CDC45: CDC45-like protein; InterPro: IPR003874 CDC45 is an essential gene required for initiation of DNA replication in Saccharomyces cerevisiae (cell division control protein 45), forming a complex with MCM5/CDC46 Back     alignment and domain information
>COG4138 BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] Back     alignment and domain information
>KOG0055|consensus Back     alignment and domain information
>PLN03140 ABC transporter G family member; Provisional Back     alignment and domain information
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR) Back     alignment and domain information
>cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR) Back     alignment and domain information
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only] Back     alignment and domain information
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03140 ABC transporter G family member; Provisional Back     alignment and domain information
>COG4778 PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein Back     alignment and domain information
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP) Back     alignment and domain information
>PLN03232 ABC transporter C family member; Provisional Back     alignment and domain information
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein Back     alignment and domain information
>PLN03130 ABC transporter C family member; Provisional Back     alignment and domain information
>PLN03073 ABC transporter F family; Provisional Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit Back     alignment and domain information
>PTZ00243 ABC transporter; Provisional Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>KOG0061|consensus Back     alignment and domain information
>KOG0059|consensus Back     alignment and domain information
>cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends Back     alignment and domain information
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases Back     alignment and domain information
>cd01882 BMS1 Bms1 Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>PRK10078 ribose 1,5-bisphosphokinase; Provisional Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>cd03283 ABC_MutS-like MutS-like homolog in eukaryotes Back     alignment and domain information
>KOG1832|consensus Back     alignment and domain information
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] Back     alignment and domain information
>PRK00300 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK09825 idnK D-gluconate kinase; Provisional Back     alignment and domain information
>cd03272 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains Back     alignment and domain information
>cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains Back     alignment and domain information
>KOG0054|consensus Back     alignment and domain information
>KOG0927|consensus Back     alignment and domain information
>cd03280 ABC_MutS2 MutS2 homologs in bacteria and eukaryotes Back     alignment and domain information
>KOG0066|consensus Back     alignment and domain information
>cd03243 ABC_MutS_homologs The MutS protein initiates DNA mismatch repair by recognizing mispaired and unpaired bases embedded in duplex DNA and activating endo- and exonucleases to remove the mismatch Back     alignment and domain information
>cd03274 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains Back     alignment and domain information
>cd03273 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains Back     alignment and domain information
>TIGR03263 guanyl_kin guanylate kinase Back     alignment and domain information
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] Back     alignment and domain information
>KOG0064|consensus Back     alignment and domain information
>TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Back     alignment and domain information
>PF13555 AAA_29: P-loop containing region of AAA domain Back     alignment and domain information
>KOG0054|consensus Back     alignment and domain information
>KOG0065|consensus Back     alignment and domain information
>PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed Back     alignment and domain information
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar Back     alignment and domain information
>KOG2355|consensus Back     alignment and domain information
>KOG0927|consensus Back     alignment and domain information
>KOG0060|consensus Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>PRK07196 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>COG5177 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR02858 spore_III_AA stage III sporulation protein AA Back     alignment and domain information
>TIGR00554 panK_bact pantothenate kinase, bacterial type Back     alignment and domain information
>cd03282 ABC_MSH4_euk MutS4 homolog in eukaryotes Back     alignment and domain information
>PRK06002 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>cd03271 ABC_UvrA_II The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PRK08149 ATP synthase SpaL; Validated Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PRK03846 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis Back     alignment and domain information
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] Back     alignment and domain information
>PRK07960 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 Back     alignment and domain information
>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>PRK14721 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>cd01136 ATPase_flagellum-secretory_path_III Flagellum-specific ATPase/type III secretory pathway virulence-related protein Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>PRK08972 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>PF01926 MMR_HSR1: 50S ribosome-binding GTPase; InterPro: IPR002917 Human HSR1, has been localized to the human MHC class I region and is highly homologous to a putative GTP-binding protein, MMR1 from mouse Back     alignment and domain information
>TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily Back     alignment and domain information
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated Back     alignment and domain information
>TIGR03498 FliI_clade3 flagellar protein export ATPase FliI Back     alignment and domain information
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins Back     alignment and domain information
>PRK00098 GTPase RsgA; Reviewed Back     alignment and domain information
>cd03284 ABC_MutS1 MutS1 homolog in eukaryotes Back     alignment and domain information
>PRK07721 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>cd04159 Arl10_like Arl10-like subfamily Back     alignment and domain information
>KOG0461|consensus Back     alignment and domain information
>cd04155 Arl3 Arl3 subfamily Back     alignment and domain information
>cd01854 YjeQ_engC YjeQ/EngC Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>TIGR00150 HI0065_YjeE ATPase, YjeE family Back     alignment and domain information
>PLN02796 D-glycerate 3-kinase Back     alignment and domain information
>TIGR01026 fliI_yscN ATPase FliI/YscN family Back     alignment and domain information
>cd04104 p47_IIGP_like p47 (47-kDa) family Back     alignment and domain information
>PRK05541 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK05688 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>PRK00889 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK01889 GTPase RsgA; Reviewed Back     alignment and domain information
>PRK05922 type III secretion system ATPase; Validated Back     alignment and domain information
>KOG2773|consensus Back     alignment and domain information
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional Back     alignment and domain information
>cd03287 ABC_MSH3_euk MutS3 homolog in eukaryotes Back     alignment and domain information
>TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase Back     alignment and domain information
>PRK14738 gmk guanylate kinase; Provisional Back     alignment and domain information
>cd01876 YihA_EngB The YihA (EngB) subfamily Back     alignment and domain information
>KOG0062|consensus Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B Back     alignment and domain information
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>PRK07594 type III secretion system ATPase SsaN; Validated Back     alignment and domain information
>PF13304 AAA_21: AAA domain; PDB: 3QKS_B 1US8_B 1F2U_B 1F2T_B 3QKT_A 1II8_B 3QKR_B 3QKU_A Back     alignment and domain information
>PF08477 Miro: Miro-like protein; InterPro: IPR013684 Mitochondrial Rho proteins (Miro-1, Q8IXI2 from SWISSPROT and Miro-2, Q8IXI1 from SWISSPROT) are atypical Rho GTPases Back     alignment and domain information
>PRK09099 type III secretion system ATPase; Provisional Back     alignment and domain information
>TIGR03496 FliI_clade1 flagellar protein export ATPase FliI Back     alignment and domain information
>PRK08927 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>TIGR00767 rho transcription termination factor Rho Back     alignment and domain information
>cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase Back     alignment and domain information
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport Back     alignment and domain information
>PRK08533 flagellar accessory protein FlaH; Reviewed Back     alignment and domain information
>PLN02318 phosphoribulokinase/uridine kinase Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars Back     alignment and domain information
>TIGR00455 apsK adenylylsulfate kinase (apsK) Back     alignment and domain information
>PF13476 AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V_A 3QG5_B 3QF7_A 3THO_A Back     alignment and domain information
>PRK09862 putative ATP-dependent protease; Provisional Back     alignment and domain information
>cd04163 Era Era subfamily Back     alignment and domain information
>cd04164 trmE TrmE (MnmE, ThdF, MSS1) is a 3-domain protein found in bacteria and eukaryotes Back     alignment and domain information
>PRK14722 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd01898 Obg Obg subfamily Back     alignment and domain information
>PRK06936 type III secretion system ATPase; Provisional Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways Back     alignment and domain information
>PRK14737 gmk guanylate kinase; Provisional Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>PLN02165 adenylate isopentenyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1182
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1twf_F155 ABC23, DNA-directed RNA polymerases I, II, and III 2e-06
1twf_F155 ABC23, DNA-directed RNA polymerases I, II, and III 2e-04
1twf_F155 ABC23, DNA-directed RNA polymerases I, II, and III 4e-04
1twf_F155 ABC23, DNA-directed RNA polymerases I, II, and III 5e-04
2ayu_A417 Nucleosome assembly protein; histone chaperone; 3. 5e-06
2ayu_A417 Nucleosome assembly protein; histone chaperone; 3. 1e-05
2ayu_A417 Nucleosome assembly protein; histone chaperone; 3. 1e-05
2ayu_A417 Nucleosome assembly protein; histone chaperone; 3. 2e-05
3fs3_A359 Nucleosome assembly protein 1, putative; protein l 2e-05
3fs3_A359 Nucleosome assembly protein 1, putative; protein l 1e-04
3fs3_A359 Nucleosome assembly protein 1, putative; protein l 1e-04
3fs3_A359 Nucleosome assembly protein 1, putative; protein l 4e-04
3fs3_A359 Nucleosome assembly protein 1, putative; protein l 8e-04
3h0g_F142 DNA-directed RNA polymerases I, II, and III subuni 9e-05
3h0g_F142 DNA-directed RNA polymerases I, II, and III subuni 2e-04
1qkl_A127 RPB6, DNA-directed RNA polymerase II 14.4 KD polyp 9e-05
2zd7_A264 VPS75, vacuolar protein sorting-associated protein 2e-04
3mca_A592 HBS1, elongation factor 1 alpha-like protein; prot 4e-04
3cx5_F146 Cytochrome B-C1 complex subunit 6; complex III, el 6e-04
3cx5_F146 Cytochrome B-C1 complex subunit 6; complex III, el 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 61.8 bits (149), Expect = 1e-09
 Identities = 80/586 (13%), Positives = 166/586 (28%), Gaps = 198/586 (33%)

Query: 539 GSGDDKPKTRA---ELMEKKRKLKEQFDAEYDDKDGGGNTYYDDLKTQ---ATRQAELNR 592
            S D    T      L+ K+ ++ ++F  E    +      Y  L +      RQ  +  
Sbjct: 56  MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN------YKFLMSPIKTEQRQPSMMT 109

Query: 593 QQFHDLDDNARVELEGF------RAGLYIRVELDGMPCELIENFDPTYPLIVGGLQPGEE 646
           + + +  D    + + F      R   Y+++       + +    P   +++ G+     
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR------QALLELRPAKNVLIDGV----- 158

Query: 647 TIGC---------VRARVKKHRWYGKI--LKSGN----PVIMSVGWRRFQTL-PIYSKQE 690
            +G            +   + +   KI  L   N      ++ +  +    + P ++ + 
Sbjct: 159 -LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 691 DNM------------RYRMLKYTPQHVAC---MAHFWGP--------------ITR--SG 719
           D+               R L  +  +  C   + +                   TR    
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277

Query: 720 TGFLAVQ-----DVAKREPGFRVIATGTILDANQTAEVTKKLK---LTGVPMKIYKKTAF 771
           T FL+        +             ++L         + L    LT  P ++      
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 772 IKDMFNSTLEVAKFEGAKIRTVSGIRGQIKKALN--KP---QGAFR--ATFEDKIMLSDI 824
           I+D   +          K+ T+      I+ +LN  +P   +  F   + F     +  I
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTI------IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390

Query: 825 VFCRTWYKVD-------IPKLYNPVTSLLLPPEQKDSWTG--------MKTTGQLKRERG 869
           +    W+ V        + KL+    SL+    +K             ++   +L+ E  
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHK--YSLV----EKQPKESTISIPSIYLELKVKLENEYA 444

Query: 870 LHNDPQFDSMYTPIVRKPKTMTKLKIPKALQKE--------------LPYHMKP------ 909
           LH                  +    IPK    +              + +H+K       
Sbjct: 445 LHR---------------SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489

Query: 910 ----------------KYKSKETPKPQRVAVI----------------HSEREQKVASLM 937
                           K +   T      +++                  + E+ V +++
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549

Query: 938 KMLRTNYSEK--NSKEKQAMKARMVALKLRAKA---AEEAKQQRQR 978
             L     E    SK        ++ + L A+     EEA +Q QR
Sbjct: 550 DFLP-KIEENLICSKY-----TDLLRIALMAEDEAIFEEAHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1twf_F ABC23, DNA-directed RNA polymerases I, II, and III 23 KD polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.143.1.2 PDB: 1i3q_F 1i6h_F 1k83_F* 1nik_F 1nt9_F 1pqv_F 1r5u_F 1r9s_F* 1r9t_F* 1sfo_F* 1twa_F* 1twc_F* 1i50_F* 1twg_F* 1twh_F* 1wcm_F 1y1v_F 1y1w_F 1y1y_F 1y77_F* ... Length = 155 Back     alignment and structure
>1twf_F ABC23, DNA-directed RNA polymerases I, II, and III 23 KD polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.143.1.2 PDB: 1i3q_F 1i6h_F 1k83_F* 1nik_F 1nt9_F 1pqv_F 1r5u_F 1r9s_F* 1r9t_F* 1sfo_F* 1twa_F* 1twc_F* 1i50_F* 1twg_F* 1twh_F* 1wcm_F 1y1v_F 1y1w_F 1y1y_F 1y77_F* ... Length = 155 Back     alignment and structure
>1twf_F ABC23, DNA-directed RNA polymerases I, II, and III 23 KD polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.143.1.2 PDB: 1i3q_F 1i6h_F 1k83_F* 1nik_F 1nt9_F 1pqv_F 1r5u_F 1r9s_F* 1r9t_F* 1sfo_F* 1twa_F* 1twc_F* 1i50_F* 1twg_F* 1twh_F* 1wcm_F 1y1v_F 1y1w_F 1y1y_F 1y77_F* ... Length = 155 Back     alignment and structure
>1twf_F ABC23, DNA-directed RNA polymerases I, II, and III 23 KD polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.143.1.2 PDB: 1i3q_F 1i6h_F 1k83_F* 1nik_F 1nt9_F 1pqv_F 1r5u_F 1r9s_F* 1r9t_F* 1sfo_F* 1twa_F* 1twc_F* 1i50_F* 1twg_F* 1twh_F* 1wcm_F 1y1v_F 1y1w_F 1y1y_F 1y77_F* ... Length = 155 Back     alignment and structure
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A Length = 417 Back     alignment and structure
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A Length = 417 Back     alignment and structure
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A Length = 417 Back     alignment and structure
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A Length = 417 Back     alignment and structure
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A Length = 359 Back     alignment and structure
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A Length = 359 Back     alignment and structure
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A Length = 359 Back     alignment and structure
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A Length = 359 Back     alignment and structure
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A Length = 359 Back     alignment and structure
>3h0g_F DNA-directed RNA polymerases I, II, and III subunit rpabc2; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 142 Back     alignment and structure
>3h0g_F DNA-directed RNA polymerases I, II, and III subunit rpabc2; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 142 Back     alignment and structure
>1qkl_A RPB6, DNA-directed RNA polymerase II 14.4 KD polypeptide; transcription; NMR {Homo sapiens} SCOP: a.143.1.2 Length = 127 Back     alignment and structure
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A Length = 264 Back     alignment and structure
>3mca_A HBS1, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe} Length = 592 Back     alignment and structure
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F* Length = 146 Back     alignment and structure
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F* Length = 146 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1182
1wb1_A482 Translation elongation factor SELB; selenocysteine 99.7
3gfo_A275 Cobalt import ATP-binding protein CBIO 1; structur 98.88
3tif_A235 Uncharacterized ABC transporter ATP-binding prote; 98.86
3fvq_A359 Fe(3+) IONS import ATP-binding protein FBPC; nucle 98.85
3tui_C366 Methionine import ATP-binding protein METN; ABC-tr 98.83
1mv5_A243 LMRA, multidrug resistance ABC transporter ATP-bin 98.82
3nh6_A306 ATP-binding cassette SUB-family B member 6, mitoc; 98.82
3rlf_A381 Maltose/maltodextrin import ATP-binding protein M; 98.82
1vpl_A256 ABC transporter, ATP-binding protein; TM0544, stru 98.8
2yyz_A359 Sugar ABC transporter, ATP-binding protein; sugar 98.8
2pcj_A224 ABC transporter, lipoprotein-releasing system ATP- 98.79
2it1_A362 362AA long hypothetical maltose/maltodextrin trans 98.78
1g6h_A257 High-affinity branched-chain amino acid transport 98.78
2ff7_A247 Alpha-hemolysin translocation ATP-binding protein 98.78
1ji0_A240 ABC transporter; ATP binding protein, structural g 98.78
2olj_A263 Amino acid ABC transporter; ABC domain, ATPase, hy 98.78
1z47_A355 CYSA, putative ABC-transporter ATP-binding protein 98.77
1v43_A372 Sugar-binding transport ATP-binding protein; ATPas 98.77
2ixe_A271 Antigen peptide transporter 1; ABC ATPase, hydrola 98.77
1g29_1372 MALK, maltose transport protein MALK; ATPase, acti 98.77
1sgw_A214 Putative ABC transporter; structural genomics, P p 98.77
1b0u_A262 Histidine permease; ABC transporter, transport pro 98.76
2cbz_A237 Multidrug resistance-associated protein 1; ABC pro 98.76
1oxx_K353 GLCV, glucose, ABC transporter, ATP binding protei 98.74
2yz2_A266 Putative ABC transporter ATP-binding protein TM_0; 98.74
2pze_A229 Cystic fibrosis transmembrane conductance regulat; 98.74
3d31_A348 Sulfate/molybdate ABC transporter, ATP-binding pro 98.73
4g1u_C266 Hemin import ATP-binding protein HMUV; membrane tr 98.72
2ihy_A279 ABC transporter, ATP-binding protein; ATPase, ABC 98.71
2ghi_A260 Transport protein; multidrug resistance protein, M 98.7
2d2e_A250 SUFC protein; ABC-ATPase, SUF protein, 310-helix, 98.67
2nq2_C253 Hypothetical ABC transporter ATP-binding protein H 98.66
2zu0_C267 Probable ATP-dependent transporter SUFC; iron-sulf 98.65
2onk_A240 Molybdate/tungstate ABC transporter, ATP-binding p 98.65
3gd7_A390 Fusion complex of cystic fibrosis transmembrane co 98.63
2qi9_C249 Vitamin B12 import ATP-binding protein BTUD; inner 98.61
2bbs_A290 Cystic fibrosis transmembrane conductance regulato 98.57
3qf4_B598 Uncharacterized ABC transporter ATP-binding prote 98.54
3b5x_A582 Lipid A export ATP-binding/permease protein MSBA; 98.51
2pjz_A263 Hypothetical protein ST1066; ATP binding protein, 98.5
4a82_A578 Cystic fibrosis transmembrane conductance regulat; 98.5
3b60_A582 Lipid A export ATP-binding/permease protein MSBA; 98.49
2yl4_A595 ATP-binding cassette SUB-family B member 10, mitoc 98.44
3qf4_A587 ABC transporter, ATP-binding protein; multidrug tr 98.44
1htw_A158 HI0065; nucleotide-binding fold, structural genomi 98.39
1z6g_A218 Guanylate kinase; structural genomics, SGC, struct 98.37
1znw_A207 Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans 98.27
1s96_A219 Guanylate kinase, GMP kinase; E.coli, dimer, SAD, 98.26
4f4c_A1321 Multidrug resistance protein PGP-1; ABC transporte 98.26
3b85_A208 Phosphate starvation-inducible protein; PHOH2, ATP 98.24
4f4c_A 1321 Multidrug resistance protein PGP-1; ABC transporte 98.22
3g5u_A 1284 MCG1178, multidrug resistance protein 1A; P-glycop 98.18
3g5u_A1284 MCG1178, multidrug resistance protein 1A; P-glycop 98.14
3tr0_A205 Guanylate kinase, GMP kinase; purines, pyrimidines 98.11
1yqt_A538 RNAse L inhibitor; ATP-binding cassette, ribosome 98.11
1yqt_A538 RNAse L inhibitor; ATP-binding cassette, ribosome 98.08
3bk7_A607 ABC transporter ATP-binding protein; ABC ATPase, i 98.08
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 98.04
2iw3_A986 Elongation factor 3A; acetylation, ATP-binding, pr 98.01
3bk7_A607 ABC transporter ATP-binding protein; ABC ATPase, i 98.01
3euj_A483 Chromosome partition protein MUKB, linker; MUKB, M 98.0
3ozx_A538 RNAse L inhibitor; ATP binding cassette protein, h 97.99
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 97.98
4gp7_A171 Metallophosphoesterase; polynucleotide kinase phos 97.97
2dpy_A438 FLII, flagellum-specific ATP synthase; beta barrel 97.97
3j16_B608 RLI1P; ribosome recycling, translation, eukarya, r 97.96
2npi_A460 Protein CLP1; CLP1-PCF11 complex, ATP binding, ter 97.95
3ozx_A538 RNAse L inhibitor; ATP binding cassette protein, h 97.95
4a74_A231 DNA repair and recombination protein RADA; hydrola 97.95
3lnc_A231 Guanylate kinase, GMP kinase; ALS collaborative cr 97.93
1tq4_A413 IIGP1, interferon-inducible GTPase; interferon gam 97.93
3b9q_A302 Chloroplast SRP receptor homolog, alpha subunit CP 97.9
2v9p_A305 Replication protein E1; AAA+ molecular motor, DNA 97.9
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 97.85
2gza_A361 Type IV secretion system protein VIRB11; ATPase, h 97.85
3sop_A270 Neuronal-specific septin-3; hydrolase; HET: GDP; 2 97.84
1lvg_A198 Guanylate kinase, GMP kinase; transferase; HET: AD 97.83
2obl_A347 ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O 97.82
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 97.81
1u0l_A301 Probable GTPase ENGC; permutation, OB-fold, zinc-f 97.81
2eyu_A261 Twitching motility protein PILT; pilus retraction 97.78
1rj9_A304 FTSY, signal recognition protein; SRP-GTPase domai 97.78
2i3b_A189 HCR-ntpase, human cancer-related ntpase; AAA, ross 97.77
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 97.76
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 97.76
2og2_A359 Putative signal recognition particle receptor; nuc 97.76
2yhs_A503 FTSY, cell division protein FTSY; cell cycle, prot 97.75
1tf7_A525 KAIC; homohexamer, hexamer, circadian clock protei 97.73
3j16_B608 RLI1P; ribosome recycling, translation, eukarya, r 97.69
2pt7_A330 CAG-ALFA; ATPase, protein-protein complex, type IV 97.69
2qm8_A337 GTPase/ATPase; G protein, G3E, metallochaperone, c 97.66
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 97.65
1kgd_A180 CASK, peripheral plasma membrane CASK; maguk, guan 97.65
2ehv_A251 Hypothetical protein PH0186; KAIC, RECA ATPase, un 97.63
2j41_A207 Guanylate kinase; GMP, GMK, transferase, ATP-bindi 97.61
1qhl_A227 Protein (cell division protein MUKB); SMC, chromos 97.54
2yv5_A302 YJEQ protein; hydrolase, GTPase, permutation, stru 97.54
1lw7_A365 Transcriptional regulator NADR; NMN, NMN adenylyl 97.53
3ux8_A670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 97.53
3szr_A608 Interferon-induced GTP-binding protein MX1; interf 97.53
3kta_A182 Chromosome segregation protein SMC; structural mai 97.51
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 97.5
3e70_C328 DPA, signal recognition particle receptor; FTSY, S 97.47
1t9h_A307 YLOQ, probable GTPase ENGC; N-terminal beta-barrel 97.46
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 97.45
1ye8_A178 Protein THEP1, hypothetical UPF0334 kinase-like pr 97.45
3tau_A208 Guanylate kinase, GMP kinase; structural genomics, 97.43
4eun_A200 Thermoresistant glucokinase; putative sugar kinase 97.39
1cr0_A296 DNA primase/helicase; RECA-type protein fold, tran 97.39
2ewv_A372 Twitching motility protein PILT; pilus retraction 97.36
2rcn_A358 Probable GTPase ENGC; YJEQ, circularly permuted, G 97.32
3uie_A200 Adenylyl-sulfate kinase 1, chloroplastic; rossmann 97.31
2iw3_A986 Elongation factor 3A; acetylation, ATP-binding, pr 97.27
2bbw_A246 Adenylate kinase 4, AK4; nucleotide kinase, nucleo 97.27
3ux8_A670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 97.26
1p9r_A418 General secretion pathway protein E; bacterial typ 97.23
2oap_1511 GSPE-2, type II secretion system protein; hexameri 97.22
1pui_A210 ENGB, probable GTP-binding protein ENGB; structura 97.22
2bdt_A189 BH3686; alpha-beta protein, structural genomics, P 97.19
3jvv_A356 Twitching mobility protein; hexameric P-loop ATPas 97.16
3ney_A197 55 kDa erythrocyte membrane protein; structural ge 97.16
4aby_A415 DNA repair protein RECN; hydrolase, double strand 97.15
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 97.14
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 97.14
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 97.14
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 97.11
2f1r_A171 Molybdopterin-guanine dinucleotide biosynthesis pr 97.11
1kag_A173 SKI, shikimate kinase I; transferase, structural g 97.1
3vaa_A199 Shikimate kinase, SK; structural genomics, center 97.08
2w0m_A235 SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus 97.06
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 97.04
1pzn_A349 RAD51, DNA repair and recombination protein RAD51, 97.03
1svm_A377 Large T antigen; AAA+ fold, viral protein; HET: AT 96.88
2kjq_A149 DNAA-related protein; solution structure, NESG, st 96.86
3thx_B918 DNA mismatch repair protein MSH3; ABC family ATPas 96.83
3nwj_A250 ATSK2; P loop, shikimate, nucleoside monophosphate 96.83
1wb9_A800 DNA mismatch repair protein MUTS; DNA-binding, ATP 96.82
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 96.8
1n0w_A243 DNA repair protein RAD51 homolog 1; DNA repair, ho 96.76
1nij_A318 Hypothetical protein YJIA; structural genomics, P- 96.73
1ewq_A765 DNA mismatch repair protein MUTS; multiple domains 96.72
2cvh_A220 DNA repair and recombination protein RADB; filamen 96.71
2qag_C418 Septin-7; cell cycle, cell division, GTP-binding, 96.67
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 96.64
1w1w_A430 Structural maintenance of chromosome 1; cohesin, c 96.63
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 96.62
3thx_A934 DNA mismatch repair protein MSH2; ABC family ATPas 96.57
2qnr_A301 Septin-2, protein NEDD5; structural genomics conso 96.57
3cr8_A552 Sulfate adenylyltranferase, adenylylsulfate kinase 96.55
2o8b_B1022 DNA mismatch repair protein MSH6; DNA damage respo 96.53
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 96.5
2pez_A179 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 96.49
1nlf_A279 Regulatory protein REPA; replicative DNA helicase 96.45
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 96.43
1oix_A191 RAS-related protein RAB-11A; small G protein, intr 96.42
2o5v_A359 DNA replication and repair protein RECF; ABC ATPas 96.42
1ni3_A392 YCHF GTPase, YCHF GTP-binding protein; structural 96.41
2vf7_A842 UVRA2, excinuclease ABC, subunit A.; DNA-binding p 96.39
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 96.37
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 96.34
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 96.33
1udx_A416 The GTP-binding protein OBG; TGS domain, riken str 96.31
2f9l_A199 RAB11B, member RAS oncogene family; RAB11B GTPase, 96.28
1vma_A306 Cell division protein FTSY; TM0570, structural gen 96.25
2px0_A296 Flagellar biosynthesis protein FLHF; SRP GTPase, f 96.23
2ygr_A993 Uvrabc system protein A; hydrolase, nucleotide exc 96.2
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 96.18
2yvu_A186 Probable adenylyl-sulfate kinase; transferase, str 96.18
3pih_A916 Uvrabc system protein A; hydrolase, ABC ATPase, DN 96.11
2r6f_A972 Excinuclease ABC subunit A; UVRA, nucleotide excis 96.07
3qf7_A365 RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1. 96.07
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 96.04
1e69_A322 Chromosome segregation SMC protein; structural mai 96.01
2gj8_A172 MNME, tRNA modification GTPase TRME; G-domain dime 96.0
2www_A349 Methylmalonic aciduria type A protein, mitochondri 96.0
1m7g_A211 Adenylylsulfate kinase; APS kinase, transferase, s 95.93
1tf7_A525 KAIC; homohexamer, hexamer, circadian clock protei 95.9
1f2t_A149 RAD50 ABC-ATPase; DNA double-strand break repair, 95.89
3lda_A400 DNA repair protein RAD51; DNA binding protein, ATP 95.88
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 95.87
4eaq_A229 DTMP kinase, thymidylate kinase; structural genomi 95.85
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 95.84
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 95.77
2wji_A165 Ferrous iron transport protein B homolog; membrane 95.76
3cm0_A186 Adenylate kinase; ATP-binding, cytoplasm, nucleoti 95.64
1qhx_A178 CPT, protein (chloramphenicol phosphotransferase); 95.63
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 95.62
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 95.44
2dr3_A247 UPF0273 protein PH0284; RECA superfamily ATPase, h 95.42
3t34_A360 Dynamin-related protein 1A, linker, dynamin-relat 95.41
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 95.41
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 95.4
1y63_A184 LMAJ004144AAA protein; structural genomics, protei 95.38
2zej_A184 Dardarin, leucine-rich repeat kinase 2; parkinson' 95.37
2wjg_A188 FEOB, ferrous iron transport protein B homolog; me 95.35
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 95.33
1q3t_A236 Cytidylate kinase; nucleotide monophosphate kinase 95.33
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 95.28
2p67_A341 LAO/AO transport system kinase; ARGK, structural G 95.22
2v54_A204 DTMP kinase, thymidylate kinase; nucleotide biosyn 95.18
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 95.17
1ex7_A186 Guanylate kinase; substrate-induced FIT, domain mo 95.16
1gtv_A214 TMK, thymidylate kinase; transferase, transferase 95.14
1ega_A301 Protein (GTP-binding protein ERA); GTPase, RNA-bin 95.06
3iij_A180 Coilin-interacting nuclear ATPase protein; alpha a 95.05
2p5t_B253 PEZT; postsegregational killing system, phosphoryl 95.03
3ice_A422 Transcription termination factor RHO; transcriptio 95.02
3qks_A203 DNA double-strand break repair RAD50 ATPase; RECA- 95.01
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 95.01
1ly1_A181 Polynucleotide kinase; PNK, phosphatase, transfera 95.01
2c95_A196 Adenylate kinase 1; transferase, AP4A, nucleotide 94.91
3r20_A233 Cytidylate kinase; structural genomics, seattle st 94.9
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 94.89
2plr_A213 DTMP kinase, probable thymidylate kinase; TMP-bind 94.88
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 94.87
3qkt_A339 DNA double-strand break repair RAD50 ATPase; RECA- 94.85
3m6a_A543 ATP-dependent protease LA 1; alpha, beta, ATP-bind 94.79
1nn5_A215 Similar to deoxythymidylate kinase (thymidylate K; 94.77
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 94.77
2wwf_A212 Thymidilate kinase, putative; transferase, malaria 94.74
3lxx_A239 GTPase IMAP family member 4; structural genomics c 94.67
1via_A175 Shikimate kinase; structural genomics, transferase 94.54
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 94.53
3k1j_A604 LON protease, ATP-dependent protease LON; ATP-bind 94.51
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 94.47
1gvn_B287 Zeta; postsegregational killing system, plasmid; 1 94.46
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 94.42
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 94.34
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 94.26
2ged_A193 SR-beta, signal recognition particle receptor beta 94.24
3hr8_A356 Protein RECA; alpha and beta proteins (A/B, A+B), 94.23
2nzj_A175 GTP-binding protein REM 1; GDP/GTP binding, GTP hy 94.22
3k53_A271 Ferrous iron transport protein B; GTPase fold, hel 94.22
1z2a_A168 RAS-related protein RAB-23; RAB GTPase, vesicular 94.21
1aky_A220 Adenylate kinase; ATP:AMP phosphotransferase, myok 94.17
1mky_A439 Probable GTP-binding protein ENGA; GTPase, DER, KH 94.17
1kao_A167 RAP2A; GTP-binding protein, small G protein, GDP, 94.16
2ce2_X166 GTPase HRAS; signaling protein, guanine nucleotide 94.14
2vli_A183 Antibiotic resistance protein; transferase, tunica 94.14
3q72_A166 GTP-binding protein RAD; G-domain, CAV2 beta, sign 94.13
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 94.12
2qtf_A364 Protein HFLX, GTP-binding protein; beta-alpha-barr 94.11
2erx_A172 GTP-binding protein DI-RAS2; GTP hydrolysis, trans 94.1
1zd8_A227 GTP:AMP phosphotransferase mitochondrial; ATP:AMP 94.06
1xjc_A169 MOBB protein homolog; structural genomics, midwest 94.05
1u8z_A168 RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNH 94.04
1g16_A170 RAS-related protein SEC4; G protein RAB, signaling 94.02
2dhr_A499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 94.01
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 94.01
3q85_A169 GTP-binding protein REM 2; G-domain, CAV2 beta, si 94.0
2cdn_A201 Adenylate kinase; phosphoryl transfer, associative 93.99
3fb4_A216 Adenylate kinase; psychrophIle, phosphotransferase 93.98
1z0j_A170 RAB-22, RAS-related protein RAB-22A; RAB GTPase, R 93.96
3t1o_A198 Gliding protein MGLA; G domain containing protein, 93.96
2lkc_A178 Translation initiation factor IF-2; NMR {Geobacill 93.95
2dyk_A161 GTP-binding protein; GTPase, ribosome-binding prot 93.95
1zak_A222 Adenylate kinase; ATP:AMP-phosphotransferase, tran 93.95
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 93.94
1qf9_A194 UMP/CMP kinase, protein (uridylmonophosphate/cytid 93.92
1ek0_A170 Protein (GTP-binding protein YPT51); vesicular tra 93.91
1wms_A177 RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, p 93.87
1c1y_A167 RAS-related protein RAP-1A; GTP-binding proteins, 93.87
1svi_A195 GTP-binding protein YSXC; ENGB, GTPase, GDP, hydro 93.85
4ad8_A517 DNA repair protein RECN; DNA binding protein, ATPa 93.85
1z08_A170 RAS-related protein RAB-21; RAB GTPase, vesicular 93.85
1ky3_A182 GTP-binding protein YPT7P; vesicular traffic, GTP 93.84
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 93.82
3tw8_B181 RAS-related protein RAB-35; longin domain, RAB GTP 93.82
2ohf_A396 Protein OLA1, GTP-binding protein 9; ATPase, GTPas 93.8
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 93.79
2fn4_A181 P23, RAS-related protein R-RAS; GDP/GTP binding, G 93.78
3dl0_A216 Adenylate kinase; phosphotransferase, zinc coordin 93.77
3clv_A208 RAB5 protein, putative; malaria, GTPase, structura 93.77
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 93.74
1e6c_A173 Shikimate kinase; phosphoryl transfer, ADP, shikim 93.74
3pqc_A195 Probable GTP-binding protein ENGB; rossmann fold, 93.74
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 93.7
1r2q_A170 RAS-related protein RAB-5A; GTPase, GNP, atomic re 93.66
2cxx_A190 Probable GTP-binding protein ENGB; structural geno 93.66
4dsu_A189 GTPase KRAS, isoform 2B; small G-protein, signalin 93.64
2ffh_A425 Protein (FFH); SRP54, signal recognition particle, 93.63
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 93.6
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 93.58
3bc1_A195 RAS-related protein RAB-27A; RAB27, GTPase, RAB, s 93.57
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 93.57
1fzq_A181 ADP-ribosylation factor-like protein 3; protein-GD 93.53
2hxs_A178 RAB-26, RAS-related protein RAB-28; GTPase, signal 93.52
2oil_A193 CATX-8, RAS-related protein RAB-25; G-protein, GDP 93.48
1upt_A171 ARL1, ADP-ribosylation factor-like protein 1; hydr 93.43
2y8e_A179 RAB-protein 6, GH09086P, RAB6; hydrolase, nucleoti 93.43
1r8s_A164 ADP-ribosylation factor 1; protein transport/excha 93.41
3iev_A308 GTP-binding protein ERA; ERA, GTPase, KH domain, a 93.39
3lxw_A247 GTPase IMAP family member 1; immunity, structural 93.37
2iyv_A184 Shikimate kinase, SK; transferase, aromatic amino 93.35
3b1v_A272 Ferrous iron uptake transporter protein B; G prote 93.34
3bos_A242 Putative DNA replication factor; P-loop containing 93.3
2g6b_A180 RAS-related protein RAB-26; G-protein, GTP analogu 93.3
3a4m_A260 L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m 93.3
1f6b_A198 SAR1; gtpases, N-terminal helix, Mg-containing com 93.27
3tlx_A243 Adenylate kinase 2; structural genomics, structura 93.25
2a9k_A187 RAS-related protein RAL-A; bacterial ADP-ribosyltr 93.23
1moz_A183 ARL1, ADP-ribosylation factor-like protein 1; GTP- 93.22
1m2o_B190 GTP-binding protein SAR1, GTP binding protein; zin 93.21
1z0f_A179 RAB14, member RAS oncogene family; RAB GTPase, ves 93.21
2qag_A361 Septin-2, protein NEDD5; cell cycle, cell division 93.14
3con_A190 GTPase NRAS; structural genomics consortium, SGC, 93.11
2efe_B181 Small GTP-binding protein-like; GEF, GTPase, VPS9, 93.11
2bme_A186 RAB4A, RAS-related protein RAB4A; GTP-binding prot 93.09
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 93.07
2bov_A206 RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, 93.06
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 93.01
2gf0_A199 GTP-binding protein DI-RAS1; GDP/GTP binding, GTP 92.99
2xb4_A223 Adenylate kinase; ATP-binding, nucleotide-binding, 92.98
1nrj_B218 SR-beta, signal recognition particle receptor beta 92.95
1vg8_A207 RAS-related protein RAB-7; GTP-binding protein, pr 92.94
3tkl_A196 RAS-related protein RAB-1A; vesicle trafficking, p 92.93
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 92.9
2gf9_A189 RAS-related protein RAB-3D; G-protein, structural 92.88
2dy1_A665 Elongation factor G; translocation, GTP complex, s 92.88
1wf3_A301 GTP-binding protein; GTPase, riken structural geno 92.87
1mh1_A186 RAC1; GTP-binding, GTPase, small G-protein, RHO fa 92.87
1m7b_A184 RND3/RHOE small GTP-binding protein; small GTPase, 92.85
3be4_A217 Adenylate kinase; malaria, cryptosporidium parvum 92.82
2zr9_A349 Protein RECA, recombinase A; recombination, RECA m 92.81
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 92.78
2fg5_A192 RAB-22B, RAS-related protein RAB-31; G-protein, GT 92.76
3kkq_A183 RAS-related protein M-RAS; GTP-binding, GTPase, si 92.75
3cbq_A195 GTP-binding protein REM 2; FLJ38964A, structural g 92.72
3ihw_A184 Centg3; RAS, centaurin, GTPase, structural genomic 92.72
3oes_A201 GTPase rhebl1; small GTPase, structural genomics, 92.71
2e87_A357 Hypothetical protein PH1320; GTP-binding, GTPase, 92.7
1zbd_A203 Rabphilin-3A; G protein, effector, RABCDR, synapti 92.7
3iby_A256 Ferrous iron transport protein B; G protein, G dom 92.7
2grj_A192 Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp 92.7
1e4v_A214 Adenylate kinase; transferase(phosphotransferase); 92.69
3t5g_A181 GTP-binding protein RHEB; immunoglobulin-like beta 92.67
1ksh_A186 ARF-like protein 2; small GTPase, small GTP-bindin 92.65
3t5d_A274 Septin-7; GTP-binding protein, cytoskeleton, signa 92.64
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 92.63
2wsm_A221 Hydrogenase expression/formation protein (HYPB); m 92.62
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 92.62
3llu_A196 RAS-related GTP-binding protein C; structural geno 92.61
3dz8_A191 RAS-related protein RAB-3B; GDP, GTPase, structura 92.6
3llm_A235 ATP-dependent RNA helicase A; alpha-beta-alpha, st 92.59
3bwd_D182 RAC-like GTP-binding protein ARAC6; G domain, cyto 92.58
2cjw_A192 GTP-binding protein GEM; nucleotide-binding, small 92.58
2f6r_A281 COA synthase, bifunctional coenzyme A synthase; 18 92.56
2xtp_A260 GTPase IMAP family member 2; immune system, G prot 92.55
2bcg_Y206 Protein YP2, GTP-binding protein YPT1; RABGTPase, 92.51
1z06_A189 RAS-related protein RAB-33B; RAB GTPase, RAB33B GT 92.48
1x3s_A195 RAS-related protein RAB-18; GTPase, GNP, structura 92.46
3cph_A213 RAS-related protein SEC4; RAB GTPase, prenylation, 92.44
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 92.44
2a5j_A191 RAS-related protein RAB-2B; GTPase, signal transdu 92.42
1zj6_A187 ADP-ribosylation factor-like protein 5; ARL, GTP-b 92.41
1jwy_B315 Dynamin A GTPase domain; dynamin, GTPase, GDP, myo 92.41
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 92.4
1ak2_A233 Adenylate kinase isoenzyme-2; nucleoside monophosp 92.4
3umf_A217 Adenylate kinase; rossmann fold, transferase; 2.05 92.4
1zd9_A188 ADP-ribosylation factor-like 10B; transport protei 92.36
2o52_A200 RAS-related protein RAB-4B; G-protein, GDP, struct 92.36
3reg_A194 RHO-like small GTPase; cytoskeleton, nucleotide-bi 92.34
3auy_A371 DNA double-strand break repair RAD50 ATPase; DNA r 92.33
2h57_A190 ADP-ribosylation factor-like protein 6; GTP, GTPas 92.33
2dby_A368 GTP-binding protein; GDP, structural genomics, NPP 92.29
2h17_A181 ADP-ribosylation factor-like protein 5A; GDP, GTPa 92.27
2p5s_A199 RAS and EF-hand domain containing; G-protein, RAB, 92.27
2atv_A196 RERG, RAS-like estrogen-regulated growth inhibitor 92.24
4bas_A199 ADP-ribosylation factor, putative (small GTPase, p 92.23
2qu8_A228 Putative nucleolar GTP-binding protein 1; GTPase, 92.22
2il1_A192 RAB12; G-protein, GDP, GTPase, predicted, structur 92.19
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 92.19
1v5w_A343 DMC1, meiotic recombination protein DMC1/LIM15 hom 92.17
1ltq_A301 Polynucleotide kinase; phosphatase, alpha/beta, P- 92.13
2ew1_A201 RAS-related protein RAB-30; G-protein, GTP analogu 92.13
2iwr_A178 Centaurin gamma 1; ANK repeat, zinc-finger, GTP-bi 92.11
4dhe_A223 Probable GTP-binding protein ENGB; melioidosis, RA 92.07
2r6a_A454 DNAB helicase, replicative helicase; replication, 92.06
3a1s_A258 Iron(II) transport protein B; FEOB, iron transport 92.05
2h92_A219 Cytidylate kinase; rossmann fold, transferase; HET 92.03
2q3h_A201 RAS homolog gene family, member U; GTPase, structu 92.03
2f7s_A217 C25KG, RAS-related protein RAB-27B; G-protein, str 92.03
2fv8_A207 H6, RHO-related GTP-binding protein RHOB; GDP/GTP 92.01
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 91.98
3i8s_A274 Ferrous iron transport protein B; GTPase, GPCR, ir 91.94
3zvl_A416 Bifunctional polynucleotide phosphatase/kinase; hy 91.94
4edh_A213 DTMP kinase, thymidylate kinase; structural genomi 91.92
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 91.89
3c5c_A187 RAS-like protein 12; GDP, GTPase, structural genom 91.89
2aka_B299 Dynamin-1; fusion protein, GTPase domain, myosin, 91.89
1gwn_A205 RHO-related GTP-binding protein RHOE; GTPase, inac 91.86
2j1l_A214 RHO-related GTP-binding protein RHOD; GTPase, memb 91.79
2fh5_B214 SR-beta, signal recognition particle receptor beta 91.77
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 91.76
2fu5_C183 RAS-related protein RAB-8A; MSS4:RAB8 protein comp 91.73
3a8t_A339 Adenylate isopentenyltransferase; rossmann fold pr 91.72
3d3q_A340 TRNA delta(2)-isopentenylpyrophosphate transferase 91.64
3lv8_A236 DTMP kinase, thymidylate kinase; structural genomi 91.63
2gco_A201 H9, RHO-related GTP-binding protein RHOC; GTPase,s 91.62
4ag6_A392 VIRB4 ATPase, type IV secretory pathway VIRB4 comp 91.61
1jal_A363 YCHF protein; nucleotide-binding fold, structural 91.59
2atx_A194 Small GTP binding protein TC10; GTPase, P-loop, al 91.5
3sr0_A206 Adenylate kinase; phosphoryl transfer analogue, AL 91.48
2b6h_A192 ADP-ribosylation factor 5; membrane trafficking, G 91.47
3v9p_A227 DTMP kinase, thymidylate kinase; ssgcid, STRU geno 91.46
2hf9_A226 Probable hydrogenase nickel incorporation protein 91.32
4tmk_A213 Protein (thymidylate kinase); ATP:DTMP phosphotran 91.29
1p5z_B263 DCK, deoxycytidine kinase; nucleoside kinase, P-lo 91.26
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 91.26
2ocp_A241 DGK, deoxyguanosine kinase; protein-nucleotide com 91.25
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 91.21
3tmk_A216 Thymidylate kinase; phosphotransferase; HET: T5A; 91.14
3def_A262 T7I23.11 protein; chloroplast, TOC33, GTPase, hydr 91.12
1h65_A270 Chloroplast outer envelope protein OEP34; GTPase, 91.08
4djt_A218 GTP-binding nuclear protein GSP1; structural genom 90.96
2z43_A324 DNA repair and recombination protein RADA; archaea 90.9
3cpj_B223 GTP-binding protein YPT31/YPT8; RAB GTPase, prenyl 90.9
2hup_A201 RAS-related protein RAB-43; G-protein, GDP, struct 90.88
2x77_A189 ADP-ribosylation factor; GTP-binding protein, smal 90.86
2g3y_A211 GTP-binding protein GEM; small GTPase, GDP, inacti 90.82
3crm_A323 TRNA delta(2)-isopentenylpyrophosphate transferase 90.81
4gzl_A204 RAS-related C3 botulinum toxin substrate 1; rossma 90.73
2yc2_C208 IFT27, small RAB-related GTPase; transport protein 90.7
2qmh_A205 HPR kinase/phosphorylase; V267F mutation, ATP-bind 90.7
3ld9_A223 DTMP kinase, thymidylate kinase; ssgcid, NIH, niai 90.69
2ce7_A476 Cell division protein FTSH; metalloprotease; HET: 90.68
2j0v_A212 RAC-like GTP-binding protein ARAC7; nucleotide-bin 90.66
3cnl_A262 YLQF, putative uncharacterized protein; circular p 90.6
3exa_A322 TRNA delta(2)-isopentenylpyrophosphate transferase 90.56
3q3j_B214 RHO-related GTP-binding protein RHO6; RAS-binding 90.54
4dcu_A456 GTP-binding protein ENGA; GTPase, GDP, protein bin 90.35
2vf7_A842 UVRA2, excinuclease ABC, subunit A.; DNA-binding p 90.35
3bh0_A315 DNAB-like replicative helicase; ATPase, replicatio 90.08
1mvl_A209 PPC decarboxylase athal3A; flavoprotein, active si 89.94
3foz_A316 TRNA delta(2)-isopentenylpyrophosphate transferas; 89.84
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 89.81
1puj_A282 YLQF, conserved hypothetical protein YLQF; structu 89.79
2chg_A226 Replication factor C small subunit; DNA-binding pr 89.63
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 89.55
1sky_E473 F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alp 89.54
2ius_A512 DNA translocase FTSK; nucleotide-binding, chromoso 89.33
2zts_A251 Putative uncharacterized protein PH0186; KAIC like 89.33
3pih_A 916 Uvrabc system protein A; hydrolase, ABC ATPase, DN 89.22
3eph_A409 TRNA isopentenyltransferase; transferase, alternat 89.12
3p32_A355 Probable GTPase RV1496/MT1543; structural genomics 89.12
2v1u_A387 Cell division control protein 6 homolog; DNA repli 89.07
2orw_A184 Thymidine kinase; TMTK, TP4A, transferase; HET: 4T 88.93
2i1q_A322 DNA repair and recombination protein RADA; ATPase, 88.89
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 88.85
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 88.75
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 88.71
3gj0_A221 GTP-binding nuclear protein RAN; G protein, GDP, a 88.71
2r62_A268 Cell division protease FTSH homolog; ATPase domain 88.63
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 88.61
3th5_A204 RAS-related C3 botulinum toxin substrate 1; rossma 88.19
4hlc_A205 DTMP kinase, thymidylate kinase; TMK, MRSA, pipiri 88.43
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 88.4
2r6f_A 972 Excinuclease ABC subunit A; UVRA, nucleotide excis 88.35
2ygr_A 993 Uvrabc system protein A; hydrolase, nucleotide exc 88.28
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 88.27
1wxq_A397 GTP-binding protein; structural genomics, riken st 88.15
2hjg_A436 GTP-binding protein ENGA; GTPase ENGA KH-domain, h 88.11
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 88.04
3hws_A363 ATP-dependent CLP protease ATP-binding subunit CL; 88.04
2x2e_A353 Dynamin-1; nitration, hydrolase, membrane fission, 88.02
3dm5_A443 SRP54, signal recognition 54 kDa protein; protein- 87.99
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 87.99
1ko7_A314 HPR kinase/phosphatase; protein kinase, phosphotra 87.98
3l0i_B199 RAS-related protein RAB-1A; GEF-GDF-RAB complex, G 87.93
2v3c_C432 SRP54, signal recognition 54 kDa protein; nucleoti 87.86
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 87.8
3r7w_A307 Gtpase1, GTP-binding protein GTR1; RAG gtpases, GT 87.59
3tqf_A181 HPR(Ser) kinase; transferase, hydrolase; 2.80A {Co 87.51
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 87.46
2qgz_A308 Helicase loader, putative primosome component; str 87.46
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 87.42
3gmt_A230 Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucle 87.33
2qpt_A550 EH domain-containing protein-2; protein-nucleotide 87.09
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 87.03
2q6t_A444 DNAB replication FORK helicase; hydrolase; 2.90A { 86.98
4a1f_A338 DNAB helicase, replicative DNA helicase; hydrolase 86.97
3ec1_A369 YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase 86.82
3geh_A462 MNME, tRNA modification GTPase MNME; G protein, U3 86.71
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 86.69
3h2y_A368 GTPase family protein; GTP-binding protein YQEH, p 86.44
2qen_A350 Walker-type ATPase; unknown function; HET: ADP; 2. 86.34
1u94_A356 RECA protein, recombinase A; homologous recombinat 86.03
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 85.94
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 85.79
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 85.78
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 85.66
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 85.58
3q5d_A447 Atlastin-1; G protein, GTPase, GDP/GTP binding, hy 85.43
2j69_A695 Bacterial dynamin-like protein; FZO, FZL, GTPase, 85.19
2hjg_A436 GTP-binding protein ENGA; GTPase ENGA KH-domain, h 85.19
2b8t_A223 Thymidine kinase; deoxyribonucleoside kinase, zinc 85.18
1lnz_A342 SPO0B-associated GTP-binding protein; GTPase, OBG, 85.14
1mky_A439 Probable GTP-binding protein ENGA; GTPase, DER, KH 84.99
1x6v_B630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 84.95
2vhj_A331 Ntpase P4, P4; non- hydrolysable ATP analogue, hyd 84.83
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A* Back     alignment and structure
Probab=99.70  E-value=1.2e-17  Score=198.54  Aligned_cols=167  Identities=16%  Similarity=0.150  Sum_probs=131.6

Q ss_pred             cccccccCCcEEEEecceeeeeecceec---ccCcceeeeeeccCCCc--eEEEEEEeecccCCceEEEEEecccCCCCc
Q psy5893         661 YGKILKSGNPVIMSVGWRRFQTLPIYSK---QEDNMRYRMLKYTPQHV--ACMAHFWGPITRSGTGFLAVQDVAKREPGF  735 (1182)
Q Consensus       661 ~~~~lkskdpli~s~G~RRf~~~Piys~---~~~n~r~k~lky~~~~~--~c~atfygPi~~~~t~vl~~~~~~~~~~~~  735 (1182)
                      ++.+|++..++.|+||..+..+....-.   -+.++.+..-+++..+.  .|...+-.|+++.+-+-++++...+.....
T Consensus       303 ~~~~l~~g~~~~l~~~t~~~~~~v~~~~~~~~d~~~~~~~~~~l~~g~~~~v~l~~~~pv~~~~~~rfilr~~~~~~~~~  382 (482)
T 1wb1_A          303 FKYNLTPKMKVHLNVGMLIVPAVAVPFKKVTFGKTEENIILNEVISGNEXYXAFELEEKVLAEVGDRVLITRLDLPPTTL  382 (482)
T ss_dssp             CCSCCCSSCEEEEEETTEEEEEEEEEEEECCSSSCCCEEECCSSCCSSCCCEEEEEEEEECCCSSCCCBEECTTSCTTSC
T ss_pred             CCcccCCCCEEEEEEcccEEEEEEEEEeccccccccccccchhhcCCCEEEEEEEcCccEEecCCCeEEEEECCCCccCc
Confidence            4579999999999999999887765433   23333344445555554  566667799988765555565522112346


Q ss_pred             EEEEEEEEecCCCCceeeEeEEEeeceeE-----EeeceEEEeccCCChHhhccccCceeEeccCc-CceeecccCCCCc
Q psy5893         736 RVIATGTILDANQTAEVTKKLKLTGVPMK-----IYKKTAFIKDMFNSTLEVAKFEGAKIRTVSGI-RGQIKKALNKPQG  809 (1182)
Q Consensus       736 ri~atG~v~~~d~~~~i~Kki~LtG~P~K-----I~K~ta~Ir~MF~s~~eV~~F~~~~l~T~sGi-rG~IK~~lg~t~G  809 (1182)
                      |.+|.|.|+.+.+    +++++|...+.|     ++++||+||+||++..+|+||.|.+|+|++|. +|+|+.++| ++|
T Consensus       383 ~tvg~G~v~~~~~----~~~l~v~k~~~k~g~v~~~~~~~i~~~lf~~~~~~~~f~g~~v~~~~g~~~G~I~~~fg-~~G  457 (482)
T 1wb1_A          383 RIXGHGLIEEFKP----IKDLNIKKEVLREGKVKIDKGRTVIDGLAQSKVAAEKLIGEEISIEGKDIVGKIKGTFG-TKG  457 (482)
T ss_dssp             CCCCBCCEEECCC----GGGSCCCCCCEEEEEEECCSSCCEETTSCSSHHHHHHSCSCCCEETTTCCCBCCCCCBT-TTT
T ss_pred             eEeeEEEEEeccc----chhceeeehhhccCcEEEcCCEEEEEcCccchhhhHHhcCcEEEEcCCceEEEEeccCC-CCc
Confidence            8999999999877    577777666666     78899999999999999999999999999999 999999997 999


Q ss_pred             eeEEEeccccccCCEEEEeccccc
Q psy5893         810 AFRATFEDKIMLSDIVFCRTWYKV  833 (1182)
Q Consensus       810 ~fka~Fe~ki~~~D~V~lr~~y~~  833 (1182)
                      +|||+|+++|.+||+|||| +|+|
T Consensus       458 ~~~~~f~~~~~~~d~v~~~-~~~~  480 (482)
T 1wb1_A          458 LLTAEFSGNVENRDKVILN-RLRR  480 (482)
T ss_dssp             BBCCCBSSCCCSSCEEEEE-CCCS
T ss_pred             eEEEEecCCCCCCCeeeee-hhhc
Confidence            9999999999999999995 4554
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} Back     alignment and structure
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* Back     alignment and structure
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C Back     alignment and structure
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 Back     alignment and structure
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A* Back     alignment and structure
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A Back     alignment and structure
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima} Back     alignment and structure
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A Back     alignment and structure
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} Back     alignment and structure
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* Back     alignment and structure
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* Back     alignment and structure
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* Back     alignment and structure
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A* Back     alignment and structure
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* Back     alignment and structure
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A Back     alignment and structure
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 Back     alignment and structure
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 Back     alignment and structure
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} Back     alignment and structure
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A* Back     alignment and structure
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} Back     alignment and structure
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A Back     alignment and structure
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12 Back     alignment and structure
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} Back     alignment and structure
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} Back     alignment and structure
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} Back     alignment and structure
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* Back     alignment and structure
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} Back     alignment and structure
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A Back     alignment and structure
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 Back     alignment and structure
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens} Back     alignment and structure
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C Back     alignment and structure
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* Back     alignment and structure
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae} Back     alignment and structure
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A Back     alignment and structure
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A Back     alignment and structure
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A Back     alignment and structure
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} Back     alignment and structure
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A Back     alignment and structure
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A* Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* Back     alignment and structure
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium} Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* Back     alignment and structure
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A* Back     alignment and structure
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} Back     alignment and structure
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} Back     alignment and structure
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} Back     alignment and structure
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 Back     alignment and structure
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A* Back     alignment and structure
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8 Back     alignment and structure
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} Back     alignment and structure
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* Back     alignment and structure
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Back     alignment and structure
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Back     alignment and structure
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A* Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A Back     alignment and structure
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A* Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} Back     alignment and structure
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 Back     alignment and structure
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus} Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Back     alignment and structure
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X* Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* Back     alignment and structure
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8 Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 Back     alignment and structure
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} Back     alignment and structure
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} Back     alignment and structure
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A* Back     alignment and structure
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* Back     alignment and structure
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V Back     alignment and structure
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* Back     alignment and structure
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 Back     alignment and structure
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8 Back     alignment and structure
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 Back     alignment and structure
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* Back     alignment and structure
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans} Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Back     alignment and structure
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11 Back     alignment and structure
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B* Back     alignment and structure
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} Back     alignment and structure
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A* Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1 Back     alignment and structure
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A* Back     alignment and structure
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* Back     alignment and structure
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A* Back     alignment and structure
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B* Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* Back     alignment and structure
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B* Back     alignment and structure
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans} Back     alignment and structure
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2 Back     alignment and structure
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A* Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1 Back     alignment and structure
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A* Back     alignment and structure
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 Back     alignment and structure
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} Back     alignment and structure
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima} Back     alignment and structure
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A Back     alignment and structure
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A* Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A Back     alignment and structure
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens} Back     alignment and structure
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* Back     alignment and structure
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A* Back     alignment and structure
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* Back     alignment and structure
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A* Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* Back     alignment and structure
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A* Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Back     alignment and structure
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 Back     alignment and structure
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B* Back     alignment and structure
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1 Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10 Back     alignment and structure
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A Back     alignment and structure
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* Back     alignment and structure
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X Back     alignment and structure
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A Back     alignment and structure
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} Back     alignment and structure
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A Back     alignment and structure
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A* Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 Back     alignment and structure
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B Back     alignment and structure
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A Back     alignment and structure
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* Back     alignment and structure
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens} Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima} Back     alignment and structure
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens} Back     alignment and structure
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus} Back     alignment and structure
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A* Back     alignment and structure
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* Back     alignment and structure
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1 Back     alignment and structure
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R* Back     alignment and structure
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ... Back     alignment and structure
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} Back     alignment and structure
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A* Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A Back     alignment and structure
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A* Back     alignment and structure
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A* Back     alignment and structure
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A Back     alignment and structure
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} Back     alignment and structure
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A* Back     alignment and structure
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A* Back     alignment and structure
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A* Back     alignment and structure
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus} Back     alignment and structure
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* Back     alignment and structure
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A* Back     alignment and structure
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D* Back     alignment and structure
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A* Back     alignment and structure
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans} Back     alignment and structure
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A* Back     alignment and structure
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A* Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens} Back     alignment and structure
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens} Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A* Back     alignment and structure
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* Back     alignment and structure
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum} Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* Back     alignment and structure
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A* Back     alignment and structure
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8 Back     alignment and structure
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A* Back     alignment and structure
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A* Back     alignment and structure
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A* Back     alignment and structure
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A* Back     alignment and structure
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens} Back     alignment and structure
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A* Back     alignment and structure
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A* Back     alignment and structure
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ... Back     alignment and structure
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A* Back     alignment and structure
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* Back     alignment and structure
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A* Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* Back     alignment and structure
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A* Back     alignment and structure
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} Back     alignment and structure
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A* Back     alignment and structure
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B* Back     alignment and structure
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A* Back     alignment and structure
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A* Back     alignment and structure
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B* Back     alignment and structure
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A* Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens} Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* Back     alignment and structure
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B* Back     alignment and structure
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens} Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A* Back     alignment and structure
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A* Back     alignment and structure
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1 Back     alignment and structure
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ... Back     alignment and structure
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B* Back     alignment and structure
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} Back     alignment and structure
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ... Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A* Back     alignment and structure
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens} Back     alignment and structure
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens} Back     alignment and structure
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii} Back     alignment and structure
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8 Back     alignment and structure
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila} Back     alignment and structure
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} Back     alignment and structure
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* Back     alignment and structure
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A* Back     alignment and structure
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A* Back     alignment and structure
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A* Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A* Back     alignment and structure
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens} Back     alignment and structure
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C Back     alignment and structure
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A* Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Back     alignment and structure
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A Back     alignment and structure
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A* Back     alignment and structure
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B* Back     alignment and structure
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A* Back     alignment and structure
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B* Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A* Back     alignment and structure
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni} Back     alignment and structure
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A* Back     alignment and structure
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens} Back     alignment and structure
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A* Back     alignment and structure
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Back     alignment and structure
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens} Back     alignment and structure
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A Back     alignment and structure
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A* Back     alignment and structure
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens} Back     alignment and structure
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927} Back     alignment and structure
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum} Back     alignment and structure
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens} Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Back     alignment and structure
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A Back     alignment and structure
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A Back     alignment and structure
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A Back     alignment and structure
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis} Back     alignment and structure
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A Back     alignment and structure
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A Back     alignment and structure
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus} Back     alignment and structure
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens} Back     alignment and structure
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A* Back     alignment and structure
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A* Back     alignment and structure
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* Back     alignment and structure
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A* Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens} Back     alignment and structure
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A* Back     alignment and structure
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8 Back     alignment and structure
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens} Back     alignment and structure
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2 Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A* Back     alignment and structure
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} Back     alignment and structure
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} Back     alignment and structure
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* Back     alignment and structure
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ... Back     alignment and structure
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A Back     alignment and structure
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2 Back     alignment and structure
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* Back     alignment and structure
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A* Back     alignment and structure
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* Back     alignment and structure
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* Back     alignment and structure
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ... Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A* Back     alignment and structure
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A* Back     alignment and structure
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A* Back     alignment and structure
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi} Back     alignment and structure
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A* Back     alignment and structure
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae} Back     alignment and structure
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens} Back     alignment and structure
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major} Back     alignment and structure
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A Back     alignment and structure
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A* Back     alignment and structure
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C Back     alignment and structure
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* Back     alignment and structure
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Back     alignment and structure
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana} Back     alignment and structure
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A* Back     alignment and structure
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Back     alignment and structure
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A* Back     alignment and structure
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A* Back     alignment and structure
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A* Back     alignment and structure
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1} Back     alignment and structure
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A* Back     alignment and structure
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8 Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 Back     alignment and structure
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A* Back     alignment and structure
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii} Back     alignment and structure
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima} Back     alignment and structure
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* Back     alignment and structure
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A* Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* Back     alignment and structure
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A* Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ... Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens} Back     alignment and structure
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A* Back     alignment and structure
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Back     alignment and structure
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2 Back     alignment and structure
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} Back     alignment and structure
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A Back     alignment and structure
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A Back     alignment and structure
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2 Back     alignment and structure
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens} Back     alignment and structure
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A* Back     alignment and structure
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus} Back     alignment and structure
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori} Back     alignment and structure
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus} Back     alignment and structure
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP} Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str} Back     alignment and structure
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} Back     alignment and structure
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Back     alignment and structure
>3q5d_A Atlastin-1; G protein, GTPase, GDP/GTP binding, hydrolase; HET: GDP; 2.70A {Homo sapiens} PDB: 3q5e_A* 3qnu_A* 3qof_A* Back     alignment and structure
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A* Back     alignment and structure
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} Back     alignment and structure
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* Back     alignment and structure
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8 Back     alignment and structure
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1 Back     alignment and structure
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Back     alignment and structure
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1182
d1qkla_127 a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 3e-06
d1r0wa_281 c.37.1.12 (A:) Cystic fibrosis transmembrane condu 0.002
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure

class: All alpha proteins
fold: RPB6/omega subunit-like
superfamily: RPB6/omega subunit-like
family: RPB6
domain: RPB6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 179 DDDDDDDDDDETDDDNDEDNEEESEEEEENEEDDDEERKAEKKNSKNEHV 228
           D++D+ D DD  D + DE  ++    EEE +E+ +     E+  +  + +
Sbjct: 3   DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRI 52
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 281 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1182
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 99.04
d2awna2232 Maltose transport protein MalK, N-terminal domain 99.0
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 99.0
d1g2912240 Maltose transport protein MalK, N-terminal domain 98.99
d1oxxk2242 Glucose transport protein GlcV, N-terminal domain 98.98
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 98.98
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 98.96
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 98.95
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 98.93
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 98.92
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 98.87
d1g6ha_254 MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 98.87
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 98.86
d2hyda1255 Putative multidrug export ATP-binding/permease pro 98.84
d1vpla_238 Putative ABC transporter TM0544 {Thermotoga mariti 98.8
d1ji0a_240 Branched chain aminoacid ABC transporter {Thermoto 98.79
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 98.72
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 98.71
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 98.7
d1l7vc_231 ABC transporter involved in vitamin B12 uptake, Bt 98.42
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 97.5
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 96.74
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 96.58
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 96.51
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 96.31
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 96.26
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 96.13
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 96.12
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 96.09
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 96.07
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 96.05
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 96.03
d1u0la2225 Probable GTPase EngC (YjeQ), C-terminal domain {Th 96.02
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 95.88
d1svia_195 Probable GTPase EngB {Bacillus subtilis [TaxId: 14 95.87
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 95.86
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 95.84
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 95.79
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 95.79
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 95.78
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 95.75
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 95.69
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 95.39
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 95.38
d2cxxa1184 GTP-binding protein engB {Pyrococcus horikoshii [T 95.37
d1t9ha2231 Probable GTPase EngC (YjeQ), C-terminal domain {Ba 95.34
d1egaa1179 GTPase Era, N-terminal domain {Escherichia coli [T 95.31
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 95.3
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 95.29
d1mkya1171 Probable GTPase Der, N-terminal and middle domains 95.26
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 95.25
d1lnza2185 Obg GTP-binding protein middle domain {Bacillus su 95.22
d1e69a_308 Smc head domain {Thermotoga maritima [TaxId: 2336] 95.2
d1nrjb_209 Signal recognition particle receptor beta-subunit 95.2
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 95.19
g1ii8.1369 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 95.18
d1qhla_222 Cell division protein MukB {Escherichia coli [TaxI 95.17
d2gj8a1161 Probable tRNA modification GTPase TrmE (MnmE), G d 95.15
d1mkya2186 Probable GTPase Der, N-terminal and middle domains 95.13
d1r8sa_160 ADP-ribosylation factor {Human (Homo sapiens), ARF 95.11
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 95.04
d1wf3a1178 GTPase Era, N-terminal domain {Thermus thermophilu 95.04
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 95.04
d2qtvb1166 SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta 95.03
d1upta_169 ADP-ribosylation factor {Human (Homo sapiens), ARL 95.02
d1wb1a279 Elongation factor SelB, domains 2 and 4 {Methanoco 94.99
g1xew.1329 Smc head domain {Pyrococcus furiosus [TaxId: 2261] 94.99
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 94.98
d1f6ba_186 SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 94.95
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 94.9
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 94.85
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 94.81
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 94.8
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 94.68
d1udxa2180 Obg GTP-binding protein middle domain {Thermus the 94.63
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 94.61
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 94.59
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 94.55
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 94.53
d1w1wa_427 Smc head domain {Baker's yeast (Saccharomyces cere 94.51
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 94.5
d1puia_188 Probable GTPase EngB {Escherichia coli [TaxId: 562 94.35
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 94.33
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 94.32
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 94.27
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 94.24
d1ksha_165 ADP-ribosylation factor {Mouse (Mus musculus), ARL 94.18
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 94.16
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 94.13
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 93.83
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 93.78
d1okkd2207 GTPase domain of the signal recognition particle r 93.72
d2fh5b1207 Signal recognition particle receptor beta-subunit 93.65
d1xzpa2160 TrmE GTPase domain {Thermotoga maritima [TaxId: 23 93.65
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 93.61
d1zj6a1177 ADP-ribosylation factor {Human (Homo sapiens), ARL 93.58
d1wb1a4179 Elongation factor SelB, N-terminal domain {Methano 93.51
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 93.5
d2p67a1327 LAO/AO transport system kinase ArgK {Escherichia c 93.43
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 93.4
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 93.39
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 93.34
d1p5zb_241 Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 93.33
d1h65a_257 Chloroplast protein translocon GTPase Toc34 {Garde 93.3
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 93.2
d1ky3a_175 Rab-related protein ypt7p {Baker's yeast (Saccharo 93.19
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 93.17
d1zd9a1164 ADP-ribosylation factor {Human (Homo sapiens), ARL 93.14
d1fzqa_176 ADP-ribosylation factor {Mouse (Mus musculus), ARL 92.8
d1ls1a2207 GTPase domain of the signal sequence recognition p 92.77
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 92.74
d3raba_169 Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} 92.72
d1qzua_181 4'-phosphopantothenoylcysteine decarboxylase (PPC 92.69
d1ctqa_166 cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 92.67
d2f9la1175 Rab11b {Human (Homo sapiens) [TaxId: 9606]} 92.54
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 92.37
d1xtqa1167 GTP-binding protein RheB {Human (Homo sapiens) [Ta 92.34
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 92.32
d1z2aa1164 Rab23 {Mouse (Mus musculus) [TaxId: 10090]} 92.29
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 92.25
d1szpa2251 DNA repair protein Rad51, catalytic domain {Baker' 92.25
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 92.22
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 92.18
d1tq4a_400 Interferon-inducible GTPase {Mouse (Mus musculus) 92.18
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 92.14
d2f7sa1186 Rab27b {Human (Homo sapiens) [TaxId: 9606]} 92.13
d2a5ja1173 Rab2b {Human (Homo sapiens) [TaxId: 9606]} 92.12
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 92.12
d1tmka_214 Thymidylate kinase {Baker's yeast (Saccharomyces c 92.1
d2erxa1171 di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 92.06
d1g16a_166 Rab-related protein Sec4 {Baker's yeast (Saccharom 92.06
d2qm8a1323 Metallochaperone MeaB {Methylobacterium extorquens 92.02
d2ew1a1171 Rab30 {Human (Homo sapiens) [TaxId: 9606]} 92.0
d1vmaa2213 GTPase domain of the signal recognition particle r 91.98
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 91.91
d2gjsa1168 Rad {Human (Homo sapiens) [TaxId: 9606]} 91.83
d2erya1171 r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 91.8
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 91.8
d1g7sa4227 Initiation factor IF2/eIF5b, N-terminal (G) domain 91.77
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 91.77
d1kaoa_167 Rap2a {Human (Homo sapiens) [TaxId: 9606]} 91.71
d1v5wa_258 Meiotic recombination protein DMC1/LIM15 homolog { 91.69
d1j8yf2211 GTPase domain of the signal sequence recognition p 91.6
d1vg8a_184 Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} 91.56
d1wmsa_174 Rab9a {Human (Homo sapiens) [TaxId: 9606]} 91.55
d1z0fa1166 Rab14 {Human (Homo sapiens) [TaxId: 9606]} 91.53
d1yzqa1164 Rab6 {Human (Homo sapiens) [TaxId: 9606]} 91.52
d2qy9a2211 GTPase domain of the signal recognition particle r 91.45
d1moza_182 ADP-ribosylation factor {Baker's yeast (Saccharomy 91.41
d1z06a1165 Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} 91.3
d1cr2a_277 Gene 4 protein (g4p, DNA primase), helicase domain 91.28
d1pzna2254 DNA repair protein Rad51, catalytic domain {Archae 91.13
d2bcgy1194 GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi 91.12
d2i1qa2258 DNA repair protein Rad51, catalytic domain {Archae 91.02
d1kmqa_177 RhoA {Human (Homo sapiens) [TaxId: 9606]} 91.01
d1x3sa1177 Rab18 {Human (Homo sapiens) [TaxId: 9606]} 90.94
d1z0ja1167 Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} 90.93
d2bmea1174 Rab4a {Human (Homo sapiens) [TaxId: 9606]} 90.76
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 90.74
d1e0sa_173 ADP-ribosylation factor {Human (Homo sapiens), ARF 90.7
d1mh1a_183 Rac {Human (Homo sapiens) [TaxId: 9606]} 90.64
d1tf7a1242 Circadian clock protein KaiC {Synechococcus sp. st 90.64
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 90.62
d1z08a1167 Rab21 {Human (Homo sapiens) [TaxId: 9606]} 90.5
d1tf7a2242 Circadian clock protein KaiC {Synechococcus sp. st 90.49
d1wb9a2234 DNA repair protein MutS, the C-terminal domain {Es 90.49
d2fn4a1173 r-Ras {Human (Homo sapiens) [TaxId: 9606]} 90.47
d1htwa_158 Hypothetical protein HI0065 {Haemophilus influenza 90.46
d2g3ya1172 GTP-binding protein GEM {Human (Homo sapiens) [Tax 90.45
d1r2qa_170 Rab5a {Human (Homo sapiens) [TaxId: 9606]} 90.4
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 90.35
d2atva1168 Ras-like estrogen-regulated growth inhibitor, RERG 90.29
d1ek0a_170 Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T 90.29
d2fu5c1173 Rab8a {Mouse (Mus musculus) [TaxId: 10090]} 90.15
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 90.14
d2g6ba1170 Rab26 {Human (Homo sapiens) [TaxId: 9606]} 90.11
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 90.06
d1i2ma_170 Ran {Human (Homo sapiens) [TaxId: 9606]} 89.82
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 89.75
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 89.7
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 89.62
d1x1ra1169 Ras-related protein M-Ras (XRas) {Mouse (Mus muscu 89.47
d1u8za_168 Ras-related protein RalA {Cotton-top tamarin (Sagu 89.43
d1zcba2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 89.42
d1ewqa2224 DNA repair protein MutS, the C-terminal domain {Th 89.39
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 89.32
d1c1ya_167 Rap1A {Human (Homo sapiens) [TaxId: 9606]} 89.18
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 89.12
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 89.12
d1odfa_286 Hypothetical protein Ygr205W {Baker's yeast (Sacch 88.94
d2atxa1185 RhoQ {Human (Homo sapiens) [TaxId: 9606]} 88.86
d2ngra_191 CDC42 {Human (Homo sapiens) [TaxId: 9606]} 88.81
d1f5na2277 Interferon-induced guanylate-binding protein 1 (GB 88.73
d2ocpa1241 Deoxyguanosine kinase {Human (Homo sapiens) [TaxId 88.48
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 88.39
d1nlfa_274 Hexameric replicative helicase repA {Escherichia c 88.36
d2bmja1175 Centaurin gamma 1, G domain {Human (Homo sapiens) 88.29
d1wxqa1319 GTP-binding protein PH0525 {Pyrococcus horikoshii 88.14
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 87.6
d1m7ba_179 RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} 87.52
d1ni3a1296 YchF GTP-binding protein N-terminal domain {Fissio 87.44
d1jwyb_306 Dynamin G domain {Dictyostelium discoideum [TaxId: 87.03
d2akab1299 Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 86.81
d1svma_362 Papillomavirus large T antigen helicase domain {Si 86.78
d1deka_241 Deoxynucleoside monophosphate kinase {Bacteriophag 86.74
d1kk1a3195 Initiation factor eIF2 gamma subunit, N-terminal ( 86.69
d1mvla_182 4'-phosphopantothenoylcysteine decarboxylase (PPC 86.36
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 86.27
d1azta2221 Transducin (alpha subunit) {Cow (Bos taurus) [TaxI 86.25
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 85.97
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 85.64
d1svsa1195 Transducin (alpha subunit) {Rat (Rattus norvegicus 85.57
d2bcjq2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 85.01
d1xpua3289 Transcription termination factor Rho, ATPase domai 84.66
d1jala1278 YchF GTP-binding protein N-terminal domain {Haemop 84.34
d2qn6a3205 Initiation factor eIF2 gamma subunit, N-terminal ( 83.82
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 83.67
d1g5qa_174 Epidermin modifying enzyme (peptidyl-cysteine deca 82.31
d1u94a1263 RecA protein, ATPase-domain {Escherichia coli [Tax 81.8
d1nija1222 Hypothetical protein YjiA, N-terminal domain {Esch 81.72
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 81.45
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 81.18
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 80.98
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 80.75
d1e9ra_433 Bacterial conjugative coupling protein TrwB {Esche 80.55
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: ABC transporter ATPase domain-like
domain: Multidrug resistance ABC transporter LmrA, C-terminal domain
species: Lactococcus lactis [TaxId: 1358]

Probab=99.04  E-value=6.5e-11  Score=126.51  Aligned_cols=85  Identities=15%  Similarity=0.071  Sum_probs=64.9

Q ss_pred             eceeeeecccccccccccCCCCCCCCCcEEEEEcCCCCCHHHHHHHHHccCCCCCCcccccCcc--------cccccccc
Q psy5893         410 KFRRKEDIQAKKHHVPQVDRTPLEPPPIVVAVVGPPQVGKSTLIRCLIKNFTKTPLSVIKGPVT--------LIIKDSIR  481 (1182)
Q Consensus       410 ~~~~~~~~~~~k~~i~~vd~~~~i~~GeivaIvGpsGsGKSTLLrlL~Gl~~~~~~SGii~wdg--------eELrdsIr  481 (1182)
                      +-.+...|...+..+..++++  +++|+++|||||||||||||+++|+|++.|+  +|.+.+++        ..++..|+
T Consensus         4 ~knvsf~Y~~~~~vL~~isl~--i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~--~G~I~i~g~~i~~~~~~~~r~~i~   79 (242)
T d1mv5a_           4 ARHVDFAYDDSEQILRDISFE--AQPNSIIAFAGPSGGGKSTIFSLLERFYQPT--AGEITIDGQPIDNISLENWRSQIG   79 (242)
T ss_dssp             EEEEEECSSSSSCSEEEEEEE--ECTTEEEEEECCTTSSHHHHHHHHTTSSCCS--BSCEEETTEESTTTSCSCCTTTCC
T ss_pred             EEEEEEECCCCCceeeeeEEE--EcCCCEEEEECCCCCCHHHHHHHHHHhhCCC--CCEEEECCEEeccccHHHHHhheE
Confidence            344555665555677888888  9999999999999999999999999999954  45444443        45567899


Q ss_pred             eeeecCcccccchHHHh
Q psy5893         482 DCFVTGKWKASEDASEL  498 (1182)
Q Consensus       482 ~VFQTGkw~~~~~~~~l  498 (1182)
                      ++||+...+...-.+++
T Consensus        80 ~v~Q~~~lf~~ti~eNi   96 (242)
T d1mv5a_          80 FVSQDSAIMAGTIRENL   96 (242)
T ss_dssp             EECCSSCCCCEEHHHHT
T ss_pred             EEccccccCCcchhhhe
Confidence            99999877765444443
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} Back     information, alignment and structure
>d1wb1a2 b.43.3.1 (A:390-468) Elongation factor SelB, domains 2 and 4 {Methanococcus maripaludis [TaxId: 39152]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} Back     information, alignment and structure
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} Back     information, alignment and structure
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} Back     information, alignment and structure
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} Back     information, alignment and structure
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Back     information, alignment and structure
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1mvla_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]} Back     information, alignment and structure
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure